Psyllid ID: psy12612

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110------
Protein Sequence
MRVELSDLRILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNKI
Secondary Structure (PSIPRED)
cEEEEccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cEEEEccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHccHcccccHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MRVELSDLRILRDEIVESVRKGEkclrpnlseltcEEEVTAIMKRCwnedpserpdfTTEIVESVRKGekclrpslseltCEEEVTAIMKRCwnedpserpdfTTLKAAIRKLNKI
Flexible Loop (DISEMBL)
mrvelsdlrilrdeivesvrkgekclrpnlseltceEEVTAIMKRcwnedpserpdfTTEIVESvrkgekclrpslseltcEEEVTAIMKRcwnedpserpdfttlkAAIRKLNKI
Low Complexity Region (SEG)
MRVELSDLRILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNKI
Disordered region (IsUnstruct)
********RILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWN************IV*******KCLRPSLSELTCEEEVTAIMKRCWN**********************
Disordered Region (DISOPRED)
***E*S*LRILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK*
Disordered Region (DISEMBL)
MRVELSDLRILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNKI
Disordered Region (DISPRO)
MRVELSDLRILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNKI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRVELSDLRILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	116	2.2.26 [Sep-21-2011]
Q6VVW5	1047	Atrial natriuretic peptid	yes	N/A	0.482	0.053	0.473	1e-10
P16067	1047	Atrial natriuretic peptid	yes	N/A	0.482	0.053	0.473	1e-10
P20594	1047	Atrial natriuretic peptid	yes	N/A	0.482	0.053	0.473	2e-10
P46197	1047	Atrial natriuretic peptid	yes	N/A	0.482	0.053	0.473	2e-10
P18910	1057	Atrial natriuretic peptid	no	N/A	0.482	0.052	0.473	6e-09
P18293	1057	Atrial natriuretic peptid	no	N/A	0.482	0.052	0.473	6e-09
P55202	1050	Atrial natriuretic peptid	N/A	N/A	0.482	0.053	0.456	1e-08
P16066	1061	Atrial natriuretic peptid	no	N/A	0.482	0.052	0.456	2e-08
Q552C1	1555	Probable serine/threonine	yes	N/A	0.508	0.037	0.349	7e-05
Q95YM9	763	Fibroblast growth factor	N/A	N/A	0.387	0.058	0.408	0.0002

>sp|Q6VVW5|ANPRB_MOUSE Atrial natriuretic peptide receptor 2 OS=Mus musculus GN=Npr2 PE=2 SV=2

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 60  EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EIV+ VR G++   RPS+      EE+  +M+RCW +DP+ERPDF  +K  IR+ NK
Sbjct: 735 EIVQKVRNGQRPYFRPSIDRTQLNEELVLLMERCWAQDPTERPDFGQIKGFIRRFNK 791

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.
Mus musculus (taxid: 10090)
EC: 4EC: .EC: 6EC: .EC: 1EC: .EC: 2

>sp|P16067|ANPRB_RAT Atrial natriuretic peptide receptor 2 OS=Rattus norvegicus GN=Npr2 PE=1 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 60  EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EIV+ VR G++   RPS+      EE+  +M+RCW +DP+ERPDF  +K  IR+ NK
Sbjct: 735 EIVQKVRNGQRPYFRPSIDRTQLNEELVLLMERCWAQDPTERPDFGQIKGFIRRFNK 791

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P20594|ANPRB_HUMAN Atrial natriuretic peptide receptor 2 OS=Homo sapiens GN=NPR2 PE=1 SV=1

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 60  EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EIV+ VR G++   RPS+      EE+  +M+RCW +DP+ERPDF  +K  IR+ NK
Sbjct: 735 EIVQKVRNGQRPYFRPSIDRTQLNEELVLLMERCWAQDPAERPDFGQIKGFIRRFNK 791

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P46197|ANPRB_BOVIN Atrial natriuretic peptide receptor 2 OS=Bos taurus GN=NPR2 PE=2 SV=1

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 60  EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EIV+ VR G++   RPS+      EE+  +M+RCW +DP+ERPDF  +K  IR+ NK
Sbjct: 735 EIVQKVRNGQRPYFRPSIDRTQLNEELVLLMERCWAQDPAERPDFGQIKGFIRRFNK 791

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Bos taurus (taxid: 9913)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P18910|ANPRA_RAT Atrial natriuretic peptide receptor 1 OS=Rattus norvegicus GN=Npr1 PE=1 SV=1

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 60  EIVESVRKGEKC-LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EI+E V +GE+   RPS+   +  EE+  +M+RCW EDP ERP F  ++ A+RK NK
Sbjct: 746 EIIERVTRGEQPPFRPSMDLQSHLEELGQLMQRCWAEDPQERPPFQQIRLALRKFNK 802

Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P18293|ANPRA_MOUSE Atrial natriuretic peptide receptor 1 OS=Mus musculus GN=Npr1 PE=2 SV=2

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 60  EIVESVRKGEKC-LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EI+E V +GE+   RPS+   +  EE+  +M+RCW EDP ERP F  ++ A+RK NK
Sbjct: 746 EIIERVTRGEQPPFRPSMDLQSHLEELGQLMQRCWAEDPQERPPFQQIRLALRKFNK 802

Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P55202|ANPRB_ANGJA Atrial natriuretic peptide receptor 2 OS=Anguilla japonica GN=npr2 PE=2 SV=1

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 60  EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EIV+ VR G+K   RP+       EE++ +M+ CW EDP++RPDF+ +K  + KLNK
Sbjct: 739 EIVQKVRNGQKPYFRPTTDTSCHSEELSILMEGCWAEDPADRPDFSYIKIFVMKLNK 795

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Anguilla japonica (taxid: 7937)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P16066|ANPRA_HUMAN Atrial natriuretic peptide receptor 1 OS=Homo sapiens GN=NPR1 PE=1 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 60  EIVESVRKGEKC-LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EI+E V +GE+   RPSL+  +  EE+  +M+RCW EDP ERP F  ++  +RK N+
Sbjct: 750 EIIERVTRGEQPPFRPSLALQSHLEELGLLMQRCWAEDPQERPPFQQIRLTLRKFNR 806

Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|Q552C1|Y9957_DICDI Probable serine/threonine-protein kinase DDB_G0276181 OS=Dictyostelium discoideum GN=DDB_G0276181 PE=3 SV=1

 Score = 45.8 bits (107), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 51   PSERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
            P     F  E+ + V KG   LRP +  + C +  T +M++CW++DP  RP F T+  +I
Sbjct: 1250 PYSHIAFNCEVEDQVLKG---LRPPIP-MHCNKNYTDLMEQCWDDDPENRPYFDTIIHSI 1305

Query: 111  RKL 113
             K+
Sbjct: 1306 SKM 1308

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q95YM9|FGFR_HALRO Fibroblast growth factor receptor OS=Halocynthia roretzi GN=FGFR PE=2 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 4/49 (8%)

Query: 58  TTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
           T E+V+ +R GE+  +P  +     +E+  +M+ CW EDPS+RP+F TL
Sbjct: 620 THELVKFLRSGERLDKPQYAS----QEMYRLMRDCWEEDPSKRPNFRTL 664

Receptor for basic fibroblast growth factor.

Halocynthia roretzi (taxid: 7729)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
328698607	423	PREDICTED: atrial natriuretic peptide re	0.482	0.132	0.714	3e-17
345493253	1322	PREDICTED: atrial natriuretic peptide re	0.482	0.042	0.543	3e-10
291463254	1131	receptor type guanylyl cyclase-like prec	0.482	0.049	0.508	5e-10
291229632	1108	PREDICTED: membrane guanylyl cyclase-lik	0.474	0.049	0.482	9e-10
340725323	1453	PREDICTED: atrial natriuretic peptide re	0.482	0.038	0.543	2e-09
350403823	1453	PREDICTED: atrial natriuretic peptide re	0.482	0.038	0.543	2e-09
112983652	1126	receptor type guanylyl cyclase [Bombyx m	0.465	0.047	0.534	2e-09
383860979	1384	PREDICTED: atrial natriuretic peptide re	0.482	0.040	0.526	2e-09
291234750	677	PREDICTED: receptor guanylyl cyclase-lik	0.474	0.081	0.5	5e-09
380016320	1351	PREDICTED: atrial natriuretic peptide re	0.482	0.041	0.491	5e-09

>gi|328698607|ref|XP_001947894.2| PREDICTED: atrial natriuretic peptide receptor 2-like [Acyrthosiphon pisum]

 Score = 92.8 bits (229), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/56 (71%), Positives = 50/56 (89%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EIV+SV+  EKCLRPS+++L+C+EEV  +MKRCW EDP++RPDFTTLKA IRKLNK
Sbjct: 61  EIVDSVKSKEKCLRPSVADLSCDEEVGVLMKRCWTEDPADRPDFTTLKAVIRKLNK 116

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345493253|ref|XP_001603765.2| PREDICTED: atrial natriuretic peptide receptor 2-like [Nasonia vitripennis]

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)

Query: 60  EIVESVRKGEKC-LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EI+E VR+G    LRP L E + +EEV ++M RCW EDP+ RPDF  LK  +RK+NK
Sbjct: 912 EIIEGVRRGGGSPLRPFLDETSVDEEVASLMDRCWAEDPAGRPDFAGLKEIVRKINK 968

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291463254|ref|NP_001167546.1| receptor type guanylyl cyclase-like precursor [Tribolium castaneum] gi|270014697|gb|EFA11145.1| hypothetical protein TcasGA2_TC004747 [Tribolium castaneum]

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 5/61 (8%)

Query: 60  EIVESVR-----KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN 114
           E V++VR      G + LRPSL E  CEEEV ++MK+CW+ED ++RPDF TLK  ++ +N
Sbjct: 754 EKVDAVRWGPDANGGQPLRPSLGEALCEEEVASLMKKCWSEDAADRPDFNTLKTKLKHIN 813

Query: 115 K 115
           K
Sbjct: 814 K 814

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291229632|ref|XP_002734777.1| PREDICTED: membrane guanylyl cyclase-like [Saccoglossus kowalevskii]

 Score = 67.8 bits (164), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 42/56 (75%), Gaps = 1/56 (1%)

Query: 60  EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN 114
           EIV+ V+ G +   RPS+ + TC EE+  +M++CW +DP+ERPDF++L+  +RKLN
Sbjct: 774 EIVQKVKSGNRPYFRPSVDKSTCPEELYPVMEKCWAQDPAERPDFSSLRTTMRKLN 829

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|340725323|ref|XP_003401021.1| PREDICTED: atrial natriuretic peptide receptor 1-like [Bombus terrestris]

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 1/57 (1%)

Query: 60  EIVESV-RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EIVE V R G   LRP++ E   EEEV  +M+RCW +D ++RPDF  LK  IRK+NK
Sbjct: 913 EIVEGVKRAGGSPLRPAIDESAVEEEVATLMRRCWAQDAADRPDFPALKQTIRKINK 969

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350403823|ref|XP_003486915.1| PREDICTED: atrial natriuretic peptide receptor 1-like [Bombus impatiens]

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 1/57 (1%)

Query: 60  EIVESV-RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EIVE V R G   LRP++ E   EEEV  +M+RCW +D ++RPDF  LK  IRK+NK
Sbjct: 913 EIVEGVKRAGGSPLRPAIDESAVEEEVATLMRRCWAQDAADRPDFPALKQTIRKINK 969

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|112983652|ref|NP_001036870.1| receptor type guanylyl cyclase [Bombyx mori] gi|12964646|dbj|BAB32672.1| receptor type guanylyl cyclase [Bombyx mori]

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 4/58 (6%)

Query: 60  EIVESVRKGEKCLRPSLSE-LTCE-EEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EI+E++R    CLRP+ S   +CE ++   +M+RCW EDP+ERPDF  LK AIR+LNK
Sbjct: 767 EIIETIRA--SCLRPNTSHHRSCEADDAAELMRRCWAEDPTERPDFGNLKGAIRRLNK 822

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383860979|ref|XP_003705964.1| PREDICTED: atrial natriuretic peptide receptor 1-like [Megachile rotundata]

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)

Query: 60  EIVESVRKGEKC-LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EIVE+V++G    LRP++ E   EEEV  +MK+CW +D ++RPDF  LK  IRK+NK
Sbjct: 910 EIVEAVKRGGGSPLRPAIDESMVEEEVATLMKKCWTQDAADRPDFPALKQTIRKINK 966

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291234750|ref|XP_002737310.1| PREDICTED: receptor guanylyl cyclase-like protein-like [Saccoglossus kowalevskii]

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)

Query: 60  EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN 114
           EIV+ VR   K   RPS+ + TC EE+  +M++CW +DP+ERPDF++L+  +RKLN
Sbjct: 343 EIVQKVRASNKPYFRPSVDKATCPEELYPVMEKCWAQDPAERPDFSSLRTTMRKLN 398

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|380016320|ref|XP_003692135.1| PREDICTED: atrial natriuretic peptide receptor 1-like [Apis florea]

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)

Query: 60  EIVESVRKGEKC-LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EIVE V++G    LRP++ +   EEEV  +M++CW +D ++RPDF  LK  IRK+NK
Sbjct: 821 EIVEGVKRGGGSPLRPAIDDAAVEEEVATLMRKCWAQDAADRPDFPALKQTIRKINK 877

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
UNIPROTKB|H7C1A1	275	NPR2 "Atrial natriuretic pepti	0.482	0.203	0.473	3.4e-10
UNIPROTKB|G3N2S3	421	NPR2 "Guanylate cyclase" [Bos	0.482	0.133	0.473	1e-09
UNIPROTKB|P46197	1047	NPR2 "Atrial natriuretic pepti	0.482	0.053	0.473	3.9e-09
UNIPROTKB|P20594	1047	NPR2 "Atrial natriuretic pepti	0.482	0.053	0.473	3.9e-09
UNIPROTKB|F1STB3	1047	NPR2 "Guanylate cyclase" [Sus	0.482	0.053	0.473	3.9e-09
MGI|MGI:97372	1047	Npr2 "natriuretic peptide rece	0.482	0.053	0.473	3.9e-09
RGD|620851	1047	Npr2 "natriuretic peptide rece	0.482	0.053	0.473	3.9e-09
UNIPROTKB|P16067	1047	Npr2 "Atrial natriuretic pepti	0.482	0.053	0.473	3.9e-09
UNIPROTKB|F1PMN5	851	NPR2 "Guanylate cyclase" [Cani	0.482	0.065	0.438	3.5e-08
UNIPROTKB|F1PPT9	967	NPR2 "Guanylate cyclase" [Cani	0.482	0.057	0.438	4.1e-08

UNIPROTKB|H7C1A1 NPR2 "Atrial natriuretic peptide receptor 2" [Homo sapiens (taxid:9606)]

 Score = 148 (57.2 bits), Expect = 3.4e-10, P = 3.4e-10
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query:    60 EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
             EIV+ VR G++   RPS+      EE+  +M+RCW +DP+ERPDF  +K  IR+ NK
Sbjct:    82 EIVQKVRNGQRPYFRPSIDRTQLNEELVLLMERCWAQDPAERPDFGQIKGFIRRFNK 138

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|G3N2S3 NPR2 "Guanylate cyclase" [Bos taurus (taxid:9913)]

 Score = 148 (57.2 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query:    60 EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
             EIV+ VR G++   RPS+      EE+  +M+RCW +DP+ERPDF  +K  IR+ NK
Sbjct:   109 EIVQKVRNGQRPYFRPSIDRTQLNEELVLLMERCWAQDPAERPDFGQIKGFIRRFNK 165

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|P46197 NPR2 "Atrial natriuretic peptide receptor 2" [Bos taurus (taxid:9913)]

 Score = 148 (57.2 bits), Expect = 3.9e-09, P = 3.9e-09
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query:    60 EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
             EIV+ VR G++   RPS+      EE+  +M+RCW +DP+ERPDF  +K  IR+ NK
Sbjct:   735 EIVQKVRNGQRPYFRPSIDRTQLNEELVLLMERCWAQDPAERPDFGQIKGFIRRFNK 791

GO:0042802 "identical protein binding" evidence=ISS

GO:0016941 "natriuretic peptide receptor activity" evidence=ISS

GO:0006182 "cGMP biosynthetic process" evidence=ISS

GO:0004383 "guanylate cyclase activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|P20594 NPR2 "Atrial natriuretic peptide receptor 2" [Homo sapiens (taxid:9606)]

 Score = 148 (57.2 bits), Expect = 3.9e-09, P = 3.9e-09
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query:    60 EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
             EIV+ VR G++   RPS+      EE+  +M+RCW +DP+ERPDF  +K  IR+ NK
Sbjct:   735 EIVQKVRNGQRPYFRPSIDRTQLNEELVLLMERCWAQDPAERPDFGQIKGFIRRFNK 791

GO:0004672 "protein kinase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0017046 "peptide hormone binding" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0060348 "bone development" evidence=IEA

GO:0006182 "cGMP biosynthetic process" evidence=IDA

GO:0004383 "guanylate cyclase activity" evidence=IDA

GO:0016941 "natriuretic peptide receptor activity" evidence=IDA

GO:0007168 "receptor guanylyl cyclase signaling pathway" evidence=IDA

GO:0042562 "hormone binding" evidence=IPI

GO:0097011 "cellular response to granulocyte macrophage colony-stimulating factor stimulus" evidence=IEP

GO:0004872 "receptor activity" evidence=TAS

GO:0007165 "signal transduction" evidence=NAS

GO:0007166 "cell surface receptor signaling pathway" evidence=TAS

GO:0004888 "transmembrane signaling receptor activity" evidence=TAS

GO:0008217 "regulation of blood pressure" evidence=TAS

UNIPROTKB|F1STB3 NPR2 "Guanylate cyclase" [Sus scrofa (taxid:9823)]

 Score = 148 (57.2 bits), Expect = 3.9e-09, P = 3.9e-09
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query:    60 EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
             EIV+ VR G++   RPS+      EE+  +M+RCW +DP+ERPDF  +K  IR+ NK
Sbjct:   735 EIVQKVRNGQRPYFRPSIDRTQLNEELVMLMERCWAQDPAERPDFGQIKGFIRRFNK 791

GO:0097011 "cellular response to granulocyte macrophage colony-stimulating factor stimulus" evidence=IEA

GO:0060348 "bone development" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0042562 "hormone binding" evidence=IEA

GO:0016941 "natriuretic peptide receptor activity" evidence=IEA

GO:0007168 "receptor guanylyl cyclase signaling pathway" evidence=IEA

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

MGI|MGI:97372 Npr2 "natriuretic peptide receptor 2" [Mus musculus (taxid:10090)]

 Score = 148 (57.2 bits), Expect = 3.9e-09, P = 3.9e-09
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query:    60 EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
             EIV+ VR G++   RPS+      EE+  +M+RCW +DP+ERPDF  +K  IR+ NK
Sbjct:   735 EIVQKVRNGQRPYFRPSIDRTQLNEELVLLMERCWAQDPTERPDFGQIKGFIRRFNK 791

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0004383 "guanylate cyclase activity" evidence=ISO;IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=ISO

GO:0005525 "GTP binding" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO;TAS

GO:0006182 "cGMP biosynthetic process" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007165 "signal transduction" evidence=IDA

GO:0007168 "receptor guanylyl cyclase signaling pathway" evidence=ISO

GO:0009190 "cyclic nucleotide biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0016849 "phosphorus-oxygen lyase activity" evidence=IEA

GO:0016941 "natriuretic peptide receptor activity" evidence=ISO;IDA

GO:0017046 "peptide hormone binding" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0042562 "hormone binding" evidence=ISO

GO:0042802 "identical protein binding" evidence=IPI

GO:0060348 "bone development" evidence=IMP

RGD|620851 Npr2 "natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B)" [Rattus norvegicus (taxid:10116)]

 Score = 148 (57.2 bits), Expect = 3.9e-09, P = 3.9e-09
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query:    60 EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
             EIV+ VR G++   RPS+      EE+  +M+RCW +DP+ERPDF  +K  IR+ NK
Sbjct:   735 EIVQKVRNGQRPYFRPSIDRTQLNEELVLLMERCWAQDPTERPDFGQIKGFIRRFNK 791

GO:0001503 "ossification" evidence=IEA

GO:0004383 "guanylate cyclase activity" evidence=IEA;ISO;IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;IDA

GO:0005525 "GTP binding" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006182 "cGMP biosynthetic process" evidence=ISO;IDA;IMP

GO:0007165 "signal transduction" evidence=ISO

GO:0007168 "receptor guanylyl cyclase signaling pathway" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0016941 "natriuretic peptide receptor activity" evidence=ISO;IDA;IMP

GO:0017046 "peptide hormone binding" evidence=IMP;IDA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0042562 "hormone binding" evidence=ISO

GO:0042802 "identical protein binding" evidence=IEA;ISO

GO:0060348 "bone development" evidence=IEA;ISO

GO:0097011 "cellular response to granulocyte macrophage colony-stimulating factor stimulus" evidence=IEA;ISO

UNIPROTKB|P16067 Npr2 "Atrial natriuretic peptide receptor 2" [Rattus norvegicus (taxid:10116)]

 Score = 148 (57.2 bits), Expect = 3.9e-09, P = 3.9e-09
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query:    60 EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
             EIV+ VR G++   RPS+      EE+  +M+RCW +DP+ERPDF  +K  IR+ NK
Sbjct:   735 EIVQKVRNGQRPYFRPSIDRTQLNEELVLLMERCWAQDPTERPDFGQIKGFIRRFNK 791

GO:0004672 "protein kinase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|F1PMN5 NPR2 "Guanylate cyclase" [Canis lupus familiaris (taxid:9615)]

 Score = 138 (53.6 bits), Expect = 3.5e-08, P = 3.5e-08
 Identities = 25/57 (43%), Positives = 37/57 (64%)

Query:    60 EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
             EIV+ VR  ++   RPS+      EE+  +M+RCW ++P+ERPDF  +K  IR+ NK
Sbjct:   539 EIVQKVRNSQRPYFRPSIDRTQLNEELVLLMERCWAQEPAERPDFGQIKGFIRRFNK 595

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|F1PPT9 NPR2 "Guanylate cyclase" [Canis lupus familiaris (taxid:9615)]

 Score = 138 (53.6 bits), Expect = 4.1e-08, P = 4.1e-08
 Identities = 25/57 (43%), Positives = 37/57 (64%)

Query:    60 EIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
             EIV+ VR  ++   RPS+      EE+  +M+RCW ++P+ERPDF  +K  IR+ NK
Sbjct:   655 EIVQKVRNSQRPYFRPSIDRTQLNEELVLLMERCWAQEPAERPDFGQIKGFIRRFNK 711

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	116
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-09
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-09
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-09
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	4e-09
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	4e-09
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	6e-09
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	9e-09
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	7e-08
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	4e-07
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	9e-07
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-06
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-06
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	3e-06
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	8e-06
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	8e-06
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-05
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	1e-05
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-05
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	3e-05
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-05
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	4e-05
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-05
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	5e-05
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	5e-05
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	5e-05
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	7e-05
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	7e-05
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	7e-05
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	8e-05
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	9e-05
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	9e-05
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	9e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-04
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	1e-04
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-04
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-04
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-04
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	2e-04
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	2e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-04
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	3e-04
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	3e-04
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-04
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	3e-04
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	4e-04
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	4e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	4e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	4e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	4e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	5e-04
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	5e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	6e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	6e-04
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	6e-04
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	7e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	7e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	8e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	8e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	8e-04
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	9e-04
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	0.001
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	0.001
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	0.001
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	0.001
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.001
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.001
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	0.001
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	0.002
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	0.002
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	0.002
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	0.002
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	0.002
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	0.002
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	0.002
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	0.002
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	0.002
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	0.002
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.002
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.002
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	0.003
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.003
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.003
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.004
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	0.004
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	0.004
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	0.004
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	0.004
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	0.004

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 58  TTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR 111
             E++E +RKG +  +P      C +E+  +M  CW  DP +RP F+ L   + 
Sbjct: 213 NEEVLEYLRKGYRLPKPEY----CPDELYELMLSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
            E++E +  G +  RP      C +E+  +M +CW  DP +RP F+ L
Sbjct: 211 EEVLELLEDGYRLPRP----ENCPDELYELMLQCWAYDPEDRPTFSEL 254

Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 5/50 (10%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           E++E +  G +  RP      C +E+  +M +CW  DP +RP F +E+VE
Sbjct: 212 EVLELLEDGYRLPRP----ENCPDELYELMLQCWAYDPEDRPTF-SELVE 256

Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 52.2 bits (126), Expect = 4e-09
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 4/47 (8%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
           E++E ++KG +  +P      C  E+  +M +CW EDP +RP F+ L
Sbjct: 212 EVLEYLKKGYRLPKPP----NCPPELYKLMLQCWAEDPEDRPTFSEL 254

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 51.8 bits (125), Expect = 4e-09
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 4/48 (8%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK 107
           E++E ++ G +  +P      C  E+  +M +CW EDP +RP F+ L 
Sbjct: 211 EVLEYLKNGYRLPQPP----NCPPELYDLMLQCWAEDPEDRPTFSELV 254

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 51.4 bits (124), Expect = 6e-09
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 5/51 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           +E++E +RKG +  +P      C +E+  +M  CW  DP +RP F +E+VE
Sbjct: 214 EEVLEYLRKGYRLPKP----EYCPDELYELMLSCWQLDPEDRPTF-SELVE 259

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 51.0 bits (123), Expect = 9e-09
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 5/51 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
            E++E ++KG +  +P      C  E+  +M +CW EDP +RP F +E+VE
Sbjct: 211 AEVLEYLKKGYRLPKPP----NCPPELYKLMLQCWAEDPEDRPTF-SELVE 256

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 5/51 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           +E++E ++ G +  +P      C  E+  +M +CW EDP +RP F +E+VE
Sbjct: 210 EEVLEYLKNGYRLPQPP----NCPPELYDLMLQCWAEDPEDRPTF-SELVE 255

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 48.6 bits (116), Expect = 7e-08
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 5/70 (7%)

Query: 42  IMKRCWNEDPSERPDFT-TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSER 100
           +M   ++E       F+ +E+VESV  G +  RP L       EV  IM  CW+E P +R
Sbjct: 190 LMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKL----APTEVYTIMYSCWHEKPEDR 245

Query: 101 PDFTTLKAAI 110
           P F  L + +
Sbjct: 246 PAFKKLLSQL 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 46.6 bits (111), Expect = 4e-07
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR 111
           E++  +  GE+  RP      C +E+ +IM  CW   P +RP F+ L++  R
Sbjct: 206 EVIAMLESGERLPRPEE----CPQEIYSIMLSCWKYRPEDRPTFSELESTFR 253

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 45.4 bits (108), Expect = 9e-07
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
            E++E V +G +  RP      C EE+  +M +CW++DP ERP F  L
Sbjct: 211 REVLEQVERGYRMPRPP----NCPEELYDLMLQCWDKDPEERPTFEYL 254

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
           E+VESV  G +  RP L       EV  IM  CW+E P +RP F  
Sbjct: 209 EVVESVSAGYRLYRPKL----APTEVYTIMYSCWHEKPEDRPAFKK 250

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 45.0 bits (107), Expect = 1e-06
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
           E++  +  GE+  RP      C +E+ +IM  CW   P +RP F+ 
Sbjct: 206 EVIAMLESGERLPRPEE----CPQEIYSIMLSCWKYRPEDRPTFSE 247

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 45.3 bits (107), Expect = 1e-06
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 5/60 (8%)

Query: 51  PSERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           P ER +  +E VE V +G +  RP L+     E+V AIM  CW+E   ERP F  L ++I
Sbjct: 201 PYERFN-NSETVEKVSQGLRLYRPHLAS----EKVYAIMYSCWHEKAEERPTFQQLLSSI 255

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 4/47 (8%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
           E+ + +++G +  +P      C +E+  +M+ CW+E PS+RP F  L
Sbjct: 242 ELFKLLKEGYRMEKPQN----CTQELYHLMRDCWHEVPSQRPTFKQL 284

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 42.8 bits (101), Expect = 8e-06
 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 5/50 (10%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           E+ + +++G +  +P      C +E+  +M+ CW+E PS+RP F  ++VE
Sbjct: 242 ELFKLLKEGYRMEKP----QNCTQELYHLMRDCWHEVPSQRPTF-KQLVE 286

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 42.8 bits (101), Expect = 8e-06
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK 107
           E+++ V +G +   P      C +E+  IM  CW EDP +RP F TL+
Sbjct: 212 EVLQQVDQGYRMPCPP----GCPKELYDIMLDCWKEDPDDRPTFETLQ 255

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 4/46 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
           E++E V +G +  RP      C EE+  +M +CW++DP ERP F  
Sbjct: 212 EVLEQVERGYRMPRPP----NCPEELYDLMLQCWDKDPEERPTFEY 253

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 42.1 bits (99), Expect = 1e-05
 Identities = 16/33 (48%), Positives = 21/33 (63%)

Query: 81  CEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           C  E+ AIMK CWN DPS+RP F+ L   +  +
Sbjct: 251 CPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 41.9 bits (98), Expect = 1e-05
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+ E + +G +  +P    L C++EV  +M++CW E P ERP F  +  ++ ++
Sbjct: 231 ELYEKLPQGYRLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 42.1 bits (99), Expect = 1e-05
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           EI + +R G +  +P      C +E+  +M  CW  DP +RP FT L+  +  +
Sbjct: 223 EIYDYLRHGNRLKQPE----DCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 41.8 bits (98), Expect = 2e-05
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 9   RILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDF 57
           R    E VE V +G +  RP+L+     E+V AIM  CW+E   ERP F
Sbjct: 204 RFNNSETVEKVSQGLRLYRPHLAS----EKVYAIMYSCWHEKAEERPTF 248

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 41.1 bits (96), Expect = 3e-05
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 6/73 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           E+ E + +G +  +P    L C++EV  +M++CW E P ERP F   +V   R  E+  R
Sbjct: 231 ELYEKLPQGYRLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE--R 284

Query: 74  PSLSELTCEEEVT 86
            +    T  E+ T
Sbjct: 285 KTYVNTTLYEKFT 297

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 41.2 bits (97), Expect = 3e-05
 Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 5/50 (10%)

Query: 60  EIVESV-RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA 108
           +I++ + ++GE+  RP      C +++  +M +CW  +P++RP F  L+ 
Sbjct: 208 QILKKIDKEGERLERPE----ACPQDIYNVMLQCWAHNPADRPTFAALRE 253

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 40.6 bits (95), Expect = 4e-05
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 4/51 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G +  RP      C EE+  +M+ CW E P ERP F  L++ +
Sbjct: 211 EVIQNLERGYRMPRPD----NCPEELYELMRLCWKEKPEERPTFEYLRSVL 257

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 4e-05
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 9   RILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDF 57
           RI   ++V  V KG +   P      C  EV  +MK CW  DP++RP F
Sbjct: 202 RIPLKDVVPHVEKGYRMEAPE----GCPPEVYKVMKDCWELDPAKRPTF 246

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 40.5 bits (95), Expect = 5e-05
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 7/57 (12%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNKI 116
           ++V  V KG +   P      C  EV  +MK CW  DP++RP F  L+    +L  I
Sbjct: 207 DVVPHVEKGYRMEAPE----GCPPEVYKVMKDCWELDPAKRPTFKQLR---EQLALI 256

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 40.3 bits (94), Expect = 5e-05
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 9   RILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDF 57
           RI   ++V  V KG K   P+     C   V  +MK+CW+ D + RP F
Sbjct: 202 RIPLKDVVPRVEKGYKMDAPD----GCPPVVYDVMKQCWHLDAATRPSF 246

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 40.4 bits (94), Expect = 5e-05
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 4/52 (7%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           ++++ ++++G +  R       C +E+  IMK CW E   ERP F  L++ +
Sbjct: 211 SDVMSALQRGYRMPRME----NCPDELYDIMKTCWKEKAEERPTFDYLQSVL 258

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 40.2 bits (94), Expect = 7e-05
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 6/52 (11%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESV 65
           E+++++ +G +  RP+     C EE+  +M+ CW E P ERP F  E + SV
Sbjct: 211 EVIQNLERGYRMPRPD----NCPEELYELMRLCWKEKPEERPTF--EYLRSV 256

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 40.0 bits (93), Expect = 7e-05
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK 107
           ++V  V KG K   P      C   V  +MK+CW+ D + RP F  L+
Sbjct: 207 DVVPRVEKGYKMDAPD----GCPPVVYDVMKQCWHLDAATRPSFLQLR 250

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 39.8 bits (93), Expect = 7e-05
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+VE + +G +  RP L+ +T    V  +M  CW+E P  RP F  L  AI
Sbjct: 209 EVVEMISRGFRLYRPKLASMT----VYEVMYSCWHEKPEGRPTFAELLRAI 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 39.7 bits (93), Expect = 8e-05
 Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 5/45 (11%)

Query: 14  EIVESV-RKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDF 57
           +I++ + ++GE+  RP      C +++  +M +CW  +P++RP F
Sbjct: 208 QILKKIDKEGERLERPE----ACPQDIYNVMLQCWAHNPADRPTF 248

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 39.9 bits (93), Expect = 9e-05
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK 107
           +EI   + KG +  +P      C E+V  +M +CW+ +P  RP F  L+
Sbjct: 222 SEIYNYLIKGNRLKQP----PDCLEDVYELMCQCWSPEPKCRPSFQHLR 266

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 39.8 bits (93), Expect = 9e-05
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 83  EEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
            E+  IMK CW+ DP +RP F  +   I K 
Sbjct: 271 AEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 39.7 bits (93), Expect = 9e-05
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 4/48 (8%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
           T ++E +++GE+  RP     +C +EV  +MK CW  +P +RP F  L
Sbjct: 233 TRLLELLKEGERLPRPP----SCPDEVYDLMKLCWEAEPQDRPSFADL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 15/24 (62%), Positives = 18/24 (75%)

Query: 35  CEEEVTAIMKRCWNEDPSERPDFT 58
           C  E+ AIMK CWN DPS+RP F+
Sbjct: 251 CPAEIYAIMKECWNNDPSQRPSFS 274

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 39.4 bits (92), Expect = 1e-04
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 16/67 (23%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           EI + +R G +  +P      C +E+  +M  CW  DP +RP FT             LR
Sbjct: 223 EIYDYLRHGNRLKQPE----DCLDELYDLMYSCWRADPKDRPTFT------------KLR 266

Query: 74  PSLSELT 80
             L  + 
Sbjct: 267 EVLENIL 273

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query: 37  EEVTAIMKRCWNEDPSERPDF 57
            E+  IMK CW+ DP +RP F
Sbjct: 271 AEIYDIMKTCWDADPLKRPTF 291

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)

Query: 63  ESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
           E++ +G +   P L    C + V  +M+RCW  DP +RP F+T+
Sbjct: 207 EAIEQGVRLPCPEL----CPDAVYRLMERCWEYDPGQRPSFSTV 246

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)

Query: 17  ESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
           E++ +G +   P L    C + V  +M+RCW  DP +RP F+T
Sbjct: 207 EAIEQGVRLPCPEL----CPDAVYRLMERCWEYDPGQRPSFST 245

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 39.4 bits (92), Expect = 1e-04
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E++E +R   + L P   +  C   V A+M  CWNE P+ RP F  +   +R  
Sbjct: 234 EVIEMIR--SRQLLPCPED--CPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 4/48 (8%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
           +E+VE++  G +  +P L      + V  +M+ CW E P +RP F+ L
Sbjct: 208 SEVVETINAGFRLYKPRL----ASQSVYELMQHCWKERPEDRPSFSLL 251

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK 112
           E++  VR G     P      C  E+  +M+ CW++ PS+RP F ++   +++
Sbjct: 240 EVIYYVRDGNVLSCPD----NCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 38.6 bits (90), Expect = 2e-04
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
           E+++ V +G +   P      C +E+  IM  CW EDP +RP F T
Sbjct: 212 EVLQQVDQGYRMPCPP----GCPKELYDIMLDCWKEDPDDRPTFET 253

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 38.7 bits (90), Expect = 2e-04
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 4/45 (8%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDF 57
           +E++  VR G     P+     C  E+  +M+ CW++ PS+RP F
Sbjct: 239 EEVIYYVRDGNVLSCPD----NCPLELYNLMRLCWSKLPSDRPSF 279

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 39.1 bits (91), Expect = 2e-04
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 4/49 (8%)

Query: 65  VRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           V++G +  RP  +      E+ +IMK CWN +P+ERP F+ +   I++ 
Sbjct: 328 VKRGYQMSRPDFAPP----EIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+ E + +G +  +P      C++EV  +M++CW + P ERP F  +   + ++
Sbjct: 226 ELYEKLPQGYRMEKPR----NCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM 275

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 65  VRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           ++ G +  RP      C EE+  +M  CW ++P +RP F  +   + K+
Sbjct: 242 LKTGYRMERPE----NCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 38.6 bits (90), Expect = 2e-04
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK 107
           E+ + +  G +   P+     C +E+  IM  CW  +P +RP F  L+
Sbjct: 212 EVYDQITAGYRMPCPA----KCPQEIYKIMLECWAAEPEDRPSFKALR 255

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDF 57
           +++ ++++G +  R       C +E+  IMK CW E   ERP F
Sbjct: 212 DVMSALQRGYRMPRME----NCPDELYDIMKTCWKEKAEERPTF 251

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 38.3 bits (89), Expect = 3e-04
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 4/44 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDF 57
           E+VE + +G +  RP L+ +T    V  +M  CW+E P  RP F
Sbjct: 209 EVVEMISRGFRLYRPKLASMT----VYEVMYSCWHEKPEGRPTF 248

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 4/45 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFT 58
           E+VE++  G +  +P L      + V  +M+ CW E P +RP F+
Sbjct: 209 EVVETINAGFRLYKPRL----ASQSVYELMQHCWKERPEDRPSFS 249

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 38.1 bits (88), Expect = 3e-04
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR 111
           E++E VRK +  L P   +  C   + ++M  CW E PS RP F  +   +R
Sbjct: 234 EVIEMVRKRQ--LLPCSED--CPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 38.1 bits (88), Expect = 4e-04
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGE 69
           E+ E + +G +  +P      C++EV  +M++CW + P ERP F    V+  R  E
Sbjct: 226 ELYEKLPQGYRMEKPR----NCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 38.0 bits (88), Expect = 4e-04
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+ + +R+G +  +PS     C  E+  +M+ CW+  P++RP F  L  A+ K+
Sbjct: 244 ELFKLLREGHRMDKPS----NCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 38.1 bits (88), Expect = 4e-04
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK 112
           +EI + +R+G +  +P      C + + ++M  CW  +P +RP F TL+  + K
Sbjct: 221 SEIYDYLRQGNRLKQPP----DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 38.0 bits (88), Expect = 4e-04
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 4/47 (8%)

Query: 15  IVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEI 61
           ++E + +G +   P      C +EV  +MK CW  +   RP F + I
Sbjct: 233 LIELLERGMRLPCPK----NCPQEVYILMKNCWETEAKFRPTFRSLI 275

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 37.5 bits (87), Expect = 4e-04
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDF 57
           E+++ V  G +  +P      C +++  +M  CW +DPSERP F
Sbjct: 221 EVLQHVTAGGRLQKPE----NCPDKIYQLMTNCWAQDPSERPTF 260

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 37.7 bits (88), Expect = 5e-04
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 5/52 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVES 64
           +E+++ V  G     P      C +++  +M+ CW  +P  RP F  EIV S
Sbjct: 228 EEVLKFVIDGGHLDLPE----NCPDKLLELMRMCWQYNPKMRPTF-LEIVSS 274

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 37.7 bits (87), Expect = 5e-04
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSER 100
           TE +E + +G +  RP     TC  EV AIM+ CW  +P +R
Sbjct: 231 TEAIECITQGRELERPR----TCPPEVYAIMQGCWQREPQQR 268

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 37.5 bits (87), Expect = 6e-04
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 4/39 (10%)

Query: 19  VRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDF 57
           V++G +  RP+ +      E+ +IMK CWN +P+ERP F
Sbjct: 328 VKRGYQMSRPDFAPP----EIYSIMKMCWNLEPTERPTF 362

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 37.2 bits (86), Expect = 6e-04
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 61  IVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
           ++E + +G +   P      C +EV  +MK CW  +   RP F +L
Sbjct: 233 LIELLERGMRLPCPK----NCPQEVYILMKNCWETEAKFRPTFRSL 274

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 37.3 bits (86), Expect = 6e-04
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)

Query: 63  ESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK 107
           E V KG +   P      C ++V  +M+RCW+  P  RP F+ L+
Sbjct: 205 EQVEKGYRMSCPQ----KCPDDVYKVMQRCWDYKPENRPKFSELQ 245

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 37.2 bits (86), Expect = 7e-04
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFT 58
           EI   + KG +  +P      C E+V  +M +CW+ +P  RP F 
Sbjct: 223 EIYNYLIKGNRLKQP----PDCLEDVYELMCQCWSPEPKCRPSFQ 263

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 37.1 bits (86), Expect = 7e-04
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           +++ E + KG +  RP      C  +V  +M+ CW  +PS+RP F  +  A   +
Sbjct: 212 SQVYELLEKGYRMERPE----GCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 37.2 bits (86), Expect = 8e-04
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
           T +V  + +G++  RP      C EEV  +M++CW   PS+R  F  L
Sbjct: 233 TRLVRVLEEGKRLPRPP----NCPEEVYQLMRKCWEFQPSKRTTFQNL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 36.9 bits (85), Expect = 8e-04
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           +EI   + KGE+  +P +    C  +V  IM +CW  D   RP F  L     K+ +
Sbjct: 218 SEISSILEKGERLPQPPI----CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 36.9 bits (85), Expect = 8e-04
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%)

Query: 35  CEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPSLSELT 80
           C E VT +M+ CW  +P  RP F  EIV  ++     L PS  E++
Sbjct: 246 CPERVTDLMRMCWQFNPKMRPTF-LEIVNLLKDD---LHPSFPEVS 287

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 37.0 bits (85), Expect = 9e-04
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+ E + +G +  +P      C++EV  +M++CW E P ERP F  +  ++ ++
Sbjct: 219 ELYEKLPQGYRLEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 6/54 (11%)

Query: 15  IVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT--EIVESVR 66
           ++E +++GE+  RP     +C +EV  +MK CW  +P +RP F     IV+ +R
Sbjct: 235 LLELLKEGERLPRPP----SCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
           E++E +R   + L P   +  C   V A+M  CWNE P+ RP F  
Sbjct: 234 EVIEMIR--SRQLLPCPED--CPARVYALMIECWNEIPARRPRFKD 275

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 36.4 bits (84), Expect = 0.001
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF 103
           E+++ V  G +  +P      C +++  +M  CW +DPSERP F
Sbjct: 221 EVLQHVTAGGRLQKPE----NCPDKIYQLMTNCWAQDPSERPTF 260

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 36.6 bits (84), Expect = 0.001
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDF 57
           E+ E + +G +  +P      C++EV  +M++CW E P ERP F
Sbjct: 219 ELYEKLPQGYRLEKPL----NCDDEVYDLMRQCWREKPYERPSF 258

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 69  EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E   R  +    C   + ++M +CW  DPS+RP FT LKA +
Sbjct: 222 ENGERLPMPPN-CPPTLYSLMTKCWAYDPSKRPRFTELKAQL 262

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 4/52 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR 111
           E+ + +  GE+   P      C  E+  +MK CW     ERP F  ++  +R
Sbjct: 206 EVTQMIESGERMECPQ----RCPPEMYDLMKLCWTYGVDERPGFAVVELRLR 253

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 36.2 bits (83), Expect = 0.001
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA 108
           E++E V +G +   P      C E +  +MK CW +DP ERP F  +++
Sbjct: 211 EVLEQVERGYRMPCPQ----GCPESLHELMKLCWKKDPDERPTFEYIQS 255

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 36.1 bits (83), Expect = 0.002
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 19  VRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDF 57
           ++ G +  RP      C EE+  +M  CW ++P +RP F
Sbjct: 242 LKTGYRMERPE----NCSEEMYNLMLTCWKQEPDKRPTF 276

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDF 57
           E++E VRK +  L P   +  C   + ++M  CW E PS RP F
Sbjct: 234 EVIEMVRKRQ--LLPCSED--CPPRMYSLMTECWQEGPSRRPRF 273

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 80  TCEEEVTAIMKRCWNEDPSERPDF 103
            C +++  +M+ CW  +P  RP F
Sbjct: 245 NCPDKLLELMRMCWQYNPKMRPTF 268

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSER 54
           E +E + +G +  RP     TC  EV AIM+ CW  +P +R
Sbjct: 232 EAIECITQGRELERPR----TCPPEVYAIMQGCWQREPQQR 268

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 36.1 bits (83), Expect = 0.002
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 4/42 (9%)

Query: 17  ESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFT 58
           E V KG +   P      C ++V  +M+RCW+  P  RP F+
Sbjct: 205 EQVEKGYRMSCPQ----KCPDDVYKVMQRCWDYKPENRPKFS 242

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 35.6 bits (82), Expect = 0.002
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 35  CEEEVTAIMKRCWNEDPSERPDFT 58
           C  +V  +M+ CW  +PS+RP F 
Sbjct: 230 CPPKVYELMRACWQWNPSDRPSFA 253

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDF 57
           E++E V +G +   P      C E +  +MK CW +DP ERP F
Sbjct: 211 EVLEQVERGYRMPCPQ----GCPESLHELMKLCWKKDPDERPTF 250

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 36.1 bits (83), Expect = 0.002
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
           E+ + +++G +  +PS     C  E+  +M+ CW+  PS+RP F  L
Sbjct: 250 ELFKLLKEGHRMDKPS----NCTNELYMMMRDCWHAVPSQRPTFKQL 292

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN 114
           E+   ++ G +  +P    + C +E+ A+M  CW  DP ERP F+ L   +   +
Sbjct: 227 EMAAYLKDGYRLAQP----INCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 81  CEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           C   +  +M RCW  +P +RP F+ L +A+
Sbjct: 244 CPSRLYKLMTRCWAVNPKDRPSFSELVSAL 273

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 55  PDFTT-EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           PD  + +I   + +G + L+P      C + +  +M  CW+  P  RP F+ L + I
Sbjct: 204 PDVDSFDITVYLLQGRRLLQPEY----CPDPLYEVMLSCWHPKPEMRPTFSELVSRI 256

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 2/31 (6%)

Query: 37  EEVTAIMKRCWNEDPSERPDF--TTEIVESV 65
           +EV  IM +CWN +P +RP F   ++IVES+
Sbjct: 367 QEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 35.3 bits (81), Expect = 0.003
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 5/49 (10%)

Query: 19  VRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           +++G + L P  +      E+  IMK CW+ DP +RP F  +IV+ + +
Sbjct: 330 IKEGYRMLSPECAPS----EMYDIMKSCWDADPLKRPTF-KQIVQLIEQ 373

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 35.1 bits (81), Expect = 0.003
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)

Query: 63  ESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
           E +  G +   P L    C EE+  +M +CW  DP  RP F+ +
Sbjct: 206 ERIESGYRMPAPQL----CPEEIYRLMLQCWAYDPENRPSFSEI 245

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 35.1 bits (81), Expect = 0.003
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 17  ESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           E +  G +   P L    C EE+  +M +CW  DP  RP F +EI   ++ 
Sbjct: 206 ERIESGYRMPAPQL----CPEEIYRLMLQCWAYDPENRPSF-SEIYNELQI 251

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           EI   + KGE+  +P +    C  +V  IM +CW  D   RP F   I+E
Sbjct: 219 EISSILEKGERLPQPPI----CTIDVYMIMVKCWMIDADSRPKFRELIIE 264

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 34.9 bits (80), Expect = 0.004
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK 112
           E+ E V KG +   P      C  +V  +M  CW  +P +RP F  L+  + K
Sbjct: 205 EVKECVEKGYRMEPPE----GCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           TE++E + +G    RP +    C +EV  IM  CW  +P +R +   +   +  L K
Sbjct: 232 TEVIECITQGRVLERPRV----CPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
           E+ + +++G +  +P+     C  E+  IM+ CW+  PS+RP F  L
Sbjct: 244 ELFKLLKEGHRMDKPA----NCTHELYMIMRECWHAVPSQRPTFKQL 286

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 34.9 bits (80), Expect = 0.004
 Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR 111
            E++  + +G++   P+     C  E+ A+MK CW     +RP+F  ++  +R
Sbjct: 205 PEVMSFIEQGKRLDCPA----ECPPEMYALMKDCWIYKWEDRPNFAKVEERMR 253

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)

Query: 58  TTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           T EI + + KGE+  +P +    C  +V  +M +CW  D   RP F  L A   ++ +
Sbjct: 217 TREIPDLLEKGERLPQPPI----CTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	116
KOG0197|consensus	468		99.97
KOG1026|consensus	774		99.97
KOG0196|consensus	996		99.95
KOG1095|consensus	1025		99.94
KOG4257|consensus	974		99.94
KOG0192|consensus	362		99.93
KOG4278|consensus	1157		99.93
KOG0200|consensus	609		99.92
KOG0199|consensus	1039		99.91
KOG1024|consensus	563		99.89
KOG0194|consensus	474		99.87
KOG0193|consensus	678		99.85
KOG1094|consensus	807		99.85
KOG1025|consensus	1177		99.84
PHA02988	283	hypothetical protein; Provisional	99.82
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.8
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.78
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.78
KOG4721|consensus	904		99.78
KOG0581|consensus	364		99.76
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.75
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.75
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.75
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.75
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.75
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.74
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.74
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.74
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.73
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.73
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.73
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.72
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.72
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.72
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.72
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.72
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.71
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.71
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.71
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.71
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.71
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.71
KOG0591|consensus	375		99.71
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.7
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.7
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.7
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.7
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.7
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.69
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.69
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.69
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.69
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.68
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.68
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.68
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.68
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.68
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.68
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.68
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.68
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.68
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.68
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.68
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.68
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.68
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.67
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.67
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.67
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.67
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.67
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.67
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.67
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.66
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.66
PTZ00283	496	serine/threonine protein kinase; Provisional	99.66
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.66
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.66
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.66
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.65
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.65
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.65
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.65
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.65
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.65
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.65
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.65
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.64
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.64
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.64
PHA02882	294	putative serine/threonine kinase; Provisional	99.64
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.64
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.64
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.63
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.63
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.63
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.63
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.63
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.63
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.62
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.62
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.62
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.62
KOG0575|consensus	592		99.62
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.62
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.61
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.61
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.61
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.61
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.6
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.6
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.6
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.6
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.6
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.6
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.6
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.6
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.59
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.59
PTZ00267	478	NIMA-related protein kinase; Provisional	99.59
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.59
KOG0578|consensus	550		99.59
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.59
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.59
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.58
KOG0983|consensus	391		99.58
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.58
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.57
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.57
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.57
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.57
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.55
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.55
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.55
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.55
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.54
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.54
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.54
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.54
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.54
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.54
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.53
KOG1006|consensus	361		99.53
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.53
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.53
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.53
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.53
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.53
KOG0201|consensus	467		99.52
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.52
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.52
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.52
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.52
KOG0198|consensus	313		99.52
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.51
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.51
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.51
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.51
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.51
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.5
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.5
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.5
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.5
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.5
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.5
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.49
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.49
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.49
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.48
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.48
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.48
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.48
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.48
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.48
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.48
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.48
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.48
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.48
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.48
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.48
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.48
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.48
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.48
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.47
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.47
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.47
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.47
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.47
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.47
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.47
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.46
KOG0577|consensus	948		99.46
KOG0596|consensus	677		99.46
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.46
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.45
KOG0588|consensus	786		99.45
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.45
PTZ00036	440	glycogen synthase kinase; Provisional	99.45
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.45
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.45
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.45
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.45
KOG1023|consensus	484		99.44
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.44
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.44
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.44
KOG0589|consensus	426		99.44
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.44
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.44
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.44
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.43
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.43
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.43
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.43
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.43
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.43
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.42
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.42
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.42
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.42
PHA03209	357	serine/threonine kinase US3; Provisional	99.42
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.41
KOG0582|consensus	516		99.41
KOG0583|consensus	370		99.41
KOG0579|consensus	1187		99.41
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.41
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.41
KOG0599|consensus	411		99.41
PTZ00284	467	protein kinase; Provisional	99.41
PHA03212	391	serine/threonine kinase US3; Provisional	99.4
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.4
KOG1989|consensus	738		99.4
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.4
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.4
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.4
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.4
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.4
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.39
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.39
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.39
PHA03207	392	serine/threonine kinase US3; Provisional	99.39
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.38
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.38
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.38
KOG0615|consensus	475		99.38
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.38
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.37
KOG1187|consensus	361		99.37
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.37
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.37
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.37
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.37
PLN00181	793	protein SPA1-RELATED; Provisional	99.36
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.36
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.36
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.36
KOG0661|consensus	538		99.36
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.35
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.35
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.35
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.35
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.35
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.35
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.35
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.35
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.34
KOG0584|consensus	632		99.34
PHA03211	461	serine/threonine kinase US3; Provisional	99.34
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.34
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.34
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.34
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.34
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.34
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.34
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.34
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.33
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.33
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.33
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.33
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.33
KOG0597|consensus	808		99.33
KOG0595|consensus	429		99.32
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.32
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.32
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.32
KOG0598|consensus	357		99.32
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.31
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.31
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.31
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.3
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.3
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.3
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.3
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.3
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.29
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.29
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.29
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.29
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.29
KOG0984|consensus	282		99.29
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.29
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.29
KOG4279|consensus	1226		99.29
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.29
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.28
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.28
KOG1035|consensus	1351		99.28
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.28
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.28
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.27
PHA03210	501	serine/threonine kinase US3; Provisional	99.27
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.27
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.26
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.26
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.26
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.26
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.26
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.25
KOG0593|consensus	396		99.25
KOG0603|consensus	612		99.24
KOG0033|consensus	355		99.24
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.23
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.23
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.23
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.22
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.22
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.21
PLN00009	294	cyclin-dependent kinase A; Provisional	99.21
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.21
KOG0195|consensus	448		99.21
KOG2052|consensus	513		99.21
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.2
KOG4717|consensus	864		99.2
KOG0694|consensus	694		99.2
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.19
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.19
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.19
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.19
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.19
KOG3653|consensus	534		99.18
KOG0592|consensus	604		99.18
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.17
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.16
KOG2345|consensus	302		99.14
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.13
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.12
KOG0574|consensus	502		99.1
KOG0032|consensus	382		99.1
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.1
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.09
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.09
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.07
KOG0585|consensus	576		99.05
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.04
KOG0587|consensus	953		99.03
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.03
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.02
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.01
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.0
KOG4645|consensus	1509		99.0
KOG0616|consensus	355		99.0
KOG0611|consensus	668		99.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.98
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.98
KOG0580|consensus	281		98.97
KOG0604|consensus	400		98.94
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.94
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.93
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.93
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.91
KOG0696|consensus	683		98.88
KOG0660|consensus	359		98.87
KOG1151|consensus	775		98.85
KOG0586|consensus	596		98.84
KOG0605|consensus	550		98.81
KOG0690|consensus	516		98.8
KOG1027|consensus	903		98.7
KOG1026|consensus	774		98.65
KOG0197|consensus	468		98.59
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.56
KOG0671|consensus	415		98.55
KOG4236|consensus	888		98.54
KOG0659|consensus	318		98.49
KOG1345|consensus	378		98.49
KOG0658|consensus	364		98.47
KOG0663|consensus	419		98.46
KOG0614|consensus	732		98.42
KOG0576|consensus	829		98.41
KOG0986|consensus	591		98.23
KOG0612|consensus	1317		98.2
KOG0667|consensus	586		98.19
KOG0594|consensus	323		98.16
KOG0196|consensus	996		98.14
KOG4158|consensus	598		98.13
KOG0670|consensus	752		98.11
KOG0607|consensus	463		98.1
KOG4278|consensus	1157		98.09
KOG0600|consensus	560		98.08
KOG1290|consensus	590		98.01
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.01
KOG0695|consensus	593		97.94
KOG0603|consensus	612		97.94
KOG4250|consensus	732		97.92
KOG1033|consensus	516		97.91
KOG0200|consensus	609		97.78
KOG1024|consensus	563		97.71
KOG4257|consensus	974		97.67
KOG1025|consensus	1177		97.64
KOG0669|consensus	376		97.63
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	97.57
KOG0610|consensus	459		97.56
KOG0606|consensus	1205		97.54
KOG0664|consensus	449		97.48
KOG0199|consensus	1039		97.46
KOG1095|consensus	1025		97.25
KOG0666|consensus	438		97.22
KOG0590|consensus	601		97.19
KOG0662|consensus	292		96.96
KOG0665|consensus	369		96.92
KOG0608|consensus	1034		96.51
KOG0668|consensus	338		96.5
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	96.31
KOG1240|consensus	1431		95.7
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	95.68
KOG0192|consensus	362		95.68
KOG1152|consensus	772		95.67
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	94.89
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	94.6
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	94.59
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	94.56
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	94.52
COG0515	384	SPS1 Serine/threonine protein kinase [General func	94.14
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	94.1
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	94.07
KOG0194|consensus	474		93.89
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	93.41
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	93.27
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	93.16
KOG1094|consensus	807		93.04
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	92.97
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	92.88
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	92.84
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	92.82
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	92.69
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	92.68
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	92.64
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	92.59
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	92.56
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	92.53
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	92.47
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	92.3
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	92.29
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	92.2
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	91.94
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	91.88
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	91.76
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	91.58
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	91.52
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	91.33
KOG1164|consensus	322		91.27
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	91.22
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	91.19
PHA02988	283	hypothetical protein; Provisional	90.99
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	90.86
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	90.8
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	90.75
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	90.68
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	90.64
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	90.53
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	90.51
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	90.26
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	90.12
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	89.97
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	89.95
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	89.93
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	89.89
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	89.89
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	89.64
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	89.6
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	89.55
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	89.52
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	89.51
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	89.13
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	89.07
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	89.05
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	88.54
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	88.42
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	88.4
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	88.25
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	87.95
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	87.67
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	87.54
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	87.34
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	87.06
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	86.97
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	86.63
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	86.61
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	86.37
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	85.84
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	85.3
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	85.24

>KOG0197|consensus

Probab=99.97  E-value=2.7e-32  Score=180.19  Aligned_cols=110  Identities=27%  Similarity=0.515  Sum_probs=90.5

Q ss_pred             eeecCCCCCCHHHH--HHHHhcCC----CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEI--VESVRKGE----KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~--~~~~~~g~----~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      .|||+||||++...  .+....|.    .+.+||.   ..|+.+|||||||+++||++++.+..+.    .++++.|.+|
T Consensus       341 ~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G  420 (468)
T KOG0197|consen  341 VVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG  420 (468)
T ss_pred             eEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc
Confidence            69999999998311  12223332    3556665   4589999999999999999997665543    4899999999


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +|+++|.    .||+++++||..||+.+|++||||..+...|+++..
T Consensus       421 yRlp~P~----~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~  463 (468)
T KOG0197|consen  421 YRLPRPE----GCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT  463 (468)
T ss_pred             CcCCCCC----CCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence            9999998    899999999999999999999999999999988754

>KOG1026|consensus

Probab=99.97  E-value=1.9e-31  Score=183.75  Aligned_cols=111  Identities=27%  Similarity=0.543  Sum_probs=92.8

Q ss_pred             CeeecCCCCCCHHHH---HHHHhcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCCC-CCCCCh---HHHHHHHh
Q psy12612          1 MRVELSDLRILRDEI---VESVRKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDPS-ERPDFT---TEIVESVR   66 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~---~~~~~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~-~~p~~~---~~~~~~l~   66 (116)
                      |.|||+||||+++..   ++++...    -|++.||.   .+|+..|||||||+.+||++++ ..|.+.   +++++.++
T Consensus       640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~  719 (774)
T KOG1026|consen  640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR  719 (774)
T ss_pred             eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH
Confidence            579999999999743   2333321    25677764   6799999999999999999985 456543   58999999


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .|..+..|.    +||.++|+||..||+.+|.+||+|++|...|+...+
T Consensus       720 ~g~lL~~Pe----~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  720 AGQLLSCPE----NCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             cCCcccCCC----CCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence            999998998    999999999999999999999999999999998764

>KOG0196|consensus

Probab=99.95  E-value=4e-29  Score=171.85  Aligned_cols=111  Identities=21%  Similarity=0.464  Sum_probs=92.3

Q ss_pred             CeeecCCCCCCHHH-----HHHHHhcCC---CCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHH
Q psy12612          1 MRVELSDLRILRDE-----IVESVRKGE---KCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESV   65 (116)
Q Consensus         1 ~~vKi~Dfgls~~~-----~~~~~~~g~---~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l   65 (116)
                      +++||+||||||.-     ..+....|.   |+.+||.   ..|+..|||||||+.+||..+ ++||.++   ++++..+
T Consensus       768 LvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaI  847 (996)
T KOG0196|consen  768 LVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI  847 (996)
T ss_pred             eEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHH
Confidence            47999999999721     112223344   4556664   468999999999999999776 7899775   5899999


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      ++|+|++.|.    +||..|++||..||+.|...||.|.+|+..|+++..
T Consensus       848 e~gyRLPpPm----DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  848 EQGYRLPPPM----DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             HhccCCCCCC----CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence            9999998888    999999999999999999999999999999999853

>KOG1095|consensus

Probab=99.94  E-value=8.8e-28  Score=170.29  Aligned_cols=109  Identities=27%  Similarity=0.492  Sum_probs=86.8

Q ss_pred             eeecCCCCCCHHHHHH--HHhc-C-----CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE--SVRK-G-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~-g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~   66 (116)
                      +|||+||||+++ ++.  .... +     .++++||.   ..|+.++||||||++|||+++...+++.    .+++..+.
T Consensus       840 ~VKIaDFGlArD-iy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~  918 (1025)
T KOG1095|consen  840 VVKIADFGLARD-IYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVL  918 (1025)
T ss_pred             cEEEcccchhHh-hhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHH
Confidence            699999999994 332  1111 1     24556665   3489999999999999999997766554    36777676


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .|.|+..|.    .||..+++||.+||..+|++||+|..|+..+..+.+
T Consensus       919 ~ggRL~~P~----~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~  963 (1025)
T KOG1095|consen  919 EGGRLDPPS----YCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN  963 (1025)
T ss_pred             hCCccCCCC----CCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence            766988887    899999999999999999999999999998877653

>KOG4257|consensus

Probab=99.94  E-value=4.6e-28  Score=164.14  Aligned_cols=109  Identities=23%  Similarity=0.490  Sum_probs=88.7

Q ss_pred             eecCCCCCCHH---HHHHHHhcCCC---CCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcCC
Q psy12612          3 VELSDLRILRD---EIVESVRKGEK---CLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKGE   69 (116)
Q Consensus         3 vKi~Dfgls~~---~~~~~~~~g~~---~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~~   69 (116)
                      ||++|||||+.   +.+++...|.-   +++||.   ..|+..||||.||+++||+.. +..|++.   .+++..+++|.
T Consensus       530 VKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGe  609 (974)
T KOG4257|consen  530 VKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGE  609 (974)
T ss_pred             eeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCC
Confidence            89999999984   33444445543   556653   358999999999999999877 5566553   36777899999


Q ss_pred             CCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         70 KCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        70 ~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      |++.|+    +||+.++.||.+||+.+|.+||.|.+|...|.++.+
T Consensus       610 RlP~P~----nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  610 RLPCPP----NCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             CCCCCC----CCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            988887    899999999999999999999999999999887753

>KOG0192|consensus

Probab=99.93  E-value=2.6e-26  Score=150.39  Aligned_cols=109  Identities=21%  Similarity=0.449  Sum_probs=85.3

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcCCCCCCCCcCc-----ccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH-hc
Q psy12612          2 RVELSDLRILRDEIVES-----VRKGEKCLRPNLSE-----LTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV-RK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g~~~~~p~~~~-----~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l-~~   67 (116)
                      ++||||||+++......     ....+++++||+-.     |+.++||||||+++||+.+++.|+-.   .++...+ ..
T Consensus       182 ~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~  261 (362)
T KOG0192|consen  182 TLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVG  261 (362)
T ss_pred             EEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence            79999999998654321     11224688999733     89999999999999999999888543   2444444 45


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.|+..|.    .|++.+..||..||+.||..||+|.+|+..|+.+.
T Consensus       262 ~~Rp~~p~----~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~  304 (362)
T KOG0192|consen  262 GLRPPIPK----ECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIM  304 (362)
T ss_pred             CCCCCCCc----cCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence            66555554    69999999999999999999999999999998765

>KOG4278|consensus

Probab=99.93  E-value=3.1e-26  Score=155.77  Aligned_cols=110  Identities=22%  Similarity=0.413  Sum_probs=87.5

Q ss_pred             eeecCCCCCCHHHHH--HHHhcCC----CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIV--ESVRKGE----KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~~g~----~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      .|||+||||++.-.-  +....|.    .+.+|+-   ..|+.++|||+||+++||+.++..-.+.    .++...+++|
T Consensus       403 iVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg  482 (1157)
T KOG4278|consen  403 IVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG  482 (1157)
T ss_pred             eEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc
Confidence            489999999985221  1122232    2445553   4578999999999999998876533232    4888999999


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +|+..|.    .||+.+|+||.+||+.+|.+||+|.+|...++.+..
T Consensus       483 yRM~~Pe----GCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  483 YRMDGPE----GCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             ccccCCC----CCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence            9999998    999999999999999999999999999999998763

>KOG0200|consensus

Probab=99.92  E-value=1.7e-25  Score=155.21  Aligned_cols=108  Identities=23%  Similarity=0.496  Sum_probs=85.8

Q ss_pred             eeecCCCCCCHHHH---HHHHhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHHHHHH
Q psy12612          2 RVELSDLRILRDEI---VESVRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~---~~~~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~~~~l   65 (116)
                      .+||+||||++...   ......+     .++++||.   ..|+.++||||||+.+||+++.+.+++.     .++.+.+
T Consensus       456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l  535 (609)
T KOG0200|consen  456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFL  535 (609)
T ss_pred             EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHH
Confidence            58999999998421   1111211     23556654   3589999999999999999986554332     4677789


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      +.|+|+.+|.    .|+.+++++|..||+.+|++||+|.++...+...
T Consensus       536 ~~G~r~~~P~----~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  536 KEGNRMEQPE----HCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             hcCCCCCCCC----CCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            9999999998    8999999999999999999999999999988874

>KOG0199|consensus

Probab=99.91  E-value=3.9e-25  Score=151.48  Aligned_cols=103  Identities=23%  Similarity=0.459  Sum_probs=81.0

Q ss_pred             eeecCCCCCCHHHH---HHHHhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCCCC-CCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEI---VESVRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSE-RPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~---~~~~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~-~p~~~---~~~~~~l~   66 (116)
                      .||||||||.+.--   ...+..+     +.+.+||.   ..|+.+||||+||+++||+++++ .|...   .++++.+.
T Consensus       250 tVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD  329 (1039)
T KOG0199|consen  250 TVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID  329 (1039)
T ss_pred             eeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc
Confidence            59999999987310   0111122     22455654   45899999999999999999854 44332   48999999


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .+.++.+|.    .|++++|++|.+||..+|.+||+|..|..
T Consensus       330 ~~erLpRPk----~csedIY~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  330 AGERLPRPK----YCSEDIYQIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             ccccCCCCC----CChHHHHHHHHHhccCCccccccHHHHHH
Confidence            999999998    89999999999999999999999999974

>KOG1024|consensus

Probab=99.89  E-value=3.2e-23  Score=134.67  Aligned_cols=110  Identities=21%  Similarity=0.400  Sum_probs=88.7

Q ss_pred             CeeecCCCCCCHHHH---HHHHhcC-CCCCCCCc------CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          1 MRVELSDLRILRDEI---VESVRKG-EKCLRPNL------SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~---~~~~~~g-~~~~~p~~------~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      ++|||+|-.|||+-.   +..+..+ .|+.+|..      ..|+..+|+||||+.+||+.+ ++.|...   .++...++
T Consensus       433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylk  512 (563)
T KOG1024|consen  433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLK  512 (563)
T ss_pred             eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHh
Confidence            489999999998643   2334333 35555543      358999999999999999877 4555332   47788899


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +|+|+.+|.    +||++++++|.-||+..|++||+|++++.-|..+.
T Consensus       513 dGyRlaQP~----NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  513 DGYRLAQPF----NCPDELFTVMACCWALLPEERPSFSQLVICLSEFH  556 (563)
T ss_pred             ccceecCCC----CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence            999999997    99999999999999999999999999998888765

>KOG0194|consensus

Probab=99.87  E-value=8.8e-23  Score=136.54  Aligned_cols=110  Identities=25%  Similarity=0.446  Sum_probs=86.1

Q ss_pred             eeecCCCCCCHHHHHHHHhc-----CCCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHH-hcC
Q psy12612          2 RVELSDLRILRDEIVESVRK-----GEKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESV-RKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~-----g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l-~~~   68 (116)
                      .|||||||||+.........     ..++.+||.   ..|+.++||||||+.|||++. +..|...   .++...+ ..+
T Consensus       300 ~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~  379 (474)
T KOG0194|consen  300 VVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNG  379 (474)
T ss_pred             eEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcC
Confidence            37999999998654221111     245677775   358899999999999999887 3445433   3666677 779


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +++..|.    ..|.++..++.+||..+|+.||+|.++...++.+.+
T Consensus       380 ~r~~~~~----~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~  422 (474)
T KOG0194|consen  380 YRMPIPS----KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK  422 (474)
T ss_pred             ccCCCCC----CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence            9887776    789999999999999999999999999999988753

>KOG0193|consensus

Probab=99.85  E-value=1.3e-22  Score=136.93  Aligned_cols=114  Identities=20%  Similarity=0.308  Sum_probs=88.2

Q ss_pred             eeecCCCCCCHHHHHHHHhc------CC-CCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVESVRK------GE-KCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~------g~-~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      .|||+||||..-...-....      |. -+++||+      .+|+..+||||||+.+||+.++..|.-.   .+++..+
T Consensus       526 kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmV  605 (678)
T KOG0193|consen  526 KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMV  605 (678)
T ss_pred             cEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEe
Confidence            69999999974321111111      11 2567776      4589999999999999999999888543   4788888


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+|+...++.....+|+.++.+|+..||..++++||.|.+|+..|+.+.+
T Consensus       606 GrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  606 GRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             cccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            88887666655556899999999999999999999999999997776643

>KOG1094|consensus

Probab=99.85  E-value=3.4e-22  Score=134.95  Aligned_cols=109  Identities=20%  Similarity=0.387  Sum_probs=79.8

Q ss_pred             CeeecCCCCCCHHH---HHHHHhc----CCCCCCCCc---CcccCHHHHHHHHHHhcccCC--CCCCCCh---HHHHHHH
Q psy12612          1 MRVELSDLRILRDE---IVESVRK----GEKCLRPNL---SELTCEEEVTAIMKRCWNEDP--SERPDFT---TEIVESV   65 (116)
Q Consensus         1 ~~vKi~Dfgls~~~---~~~~~~~----g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~--~~~p~~~---~~~~~~l   65 (116)
                      +++||+||||++.-   -+++++.    .-|+++||.   .+|+.+||+|+||+++||++.  .++|.-.   +++.+..
T Consensus       674 ~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~  753 (807)
T KOG1094|consen  674 FTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENA  753 (807)
T ss_pred             ccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhh
Confidence            47999999999832   1223322    135677774   679999999999999999765  5666432   3455443


Q ss_pred             hc----CCC---CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         66 RK----GEK---CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        66 ~~----~~~---~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      ..    +.+   +.+|.    -||.++++||.+||..+.++||+|++|+..|+..
T Consensus       754 ~~~~~~~~~~~~l~~P~----~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  754 GEFFRDQGRQVVLSRPP----ACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             hhhcCCCCcceeccCCC----cCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            32    222   45565    6999999999999999999999999999888764

>KOG1025|consensus

Probab=99.84  E-value=2.6e-21  Score=134.78  Aligned_cols=109  Identities=22%  Similarity=0.388  Sum_probs=86.0

Q ss_pred             eeecCCCCCCHHH----HHHHHhcCCCCCCCCc------CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDE----IVESVRKGEKCLRPNL------SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~----~~~~~~~g~~~~~p~~------~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      .|||+|||+++..    .-.....|..+.+|.+      ..|+.++||||||+++||+.+ +.+|.+.   +++-..++.
T Consensus       836 hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~  915 (1177)
T KOG1025|consen  836 HVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEK  915 (1177)
T ss_pred             eEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhc
Confidence            5899999998631    1122223443444432      458999999999999999877 5666554   488889999


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      |.|+..|+    .|+-+++.+|.+||..|+..||+|+++...+..+.
T Consensus       916 geRLsqPp----iCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a  958 (1177)
T KOG1025|consen  916 GERLSQPP----ICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA  958 (1177)
T ss_pred             cccCCCCC----CccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence            99998888    79999999999999999999999999998887764

>PHA02988 hypothetical protein; Provisional

Probab=99.82  E-value=3.7e-20  Score=118.43  Aligned_cols=110  Identities=15%  Similarity=0.206  Sum_probs=78.5

Q ss_pred             eeecCCCCCCHHHHHHHH-hcC-CCCCCCCc-----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHh-cCCC
Q psy12612          2 RVELSDLRILRDEIVESV-RKG-EKCLRPNL-----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVR-KGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-~~g-~~~~~p~~-----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~-~~~~   70 (116)
                      ++||+|||+++....... ..| ..+.+|+.     ..++.++||||||+++||+..+..|...   .++...+. .+.+
T Consensus       161 ~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~  240 (283)
T PHA02988        161 KLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNS  240 (283)
T ss_pred             cEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCC
Confidence            589999999863211100 112 23556765     2468899999999999999988777432   24444443 3333


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      ...|.    .++.++.++|.+||+.||++||++.+|+..|+.+..
T Consensus       241 ~~~~~----~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        241 LKLPL----DCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             CCCCC----cCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence            33332    588999999999999999999999999999988764

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.80  E-value=3.1e-21  Score=121.92  Aligned_cols=105  Identities=23%  Similarity=0.463  Sum_probs=73.0

Q ss_pred             eeecCCCCCCHHHHHH-HH------hcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCC-CCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE-SV------RKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSE-RPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~------~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~-~p~~~---~~~~~~l~~   67 (116)
                      .+||+|||++...... ..      .....+.+||.   ..++.++||||||+++||+...+ .|...   .++...+..
T Consensus       141 ~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~  220 (259)
T PF07714_consen  141 QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQ  220 (259)
T ss_dssp             EEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            6899999998642100 00      01123456654   34688999999999999999854 44321   366677777


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      +.+...|.    .++..++++|.+||+.+|++||+|.+|+..|
T Consensus       221 ~~~~~~~~----~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  221 GQRLPIPD----NCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             TEETTSBT----TSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             cccceecc----chhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            77655554    6899999999999999999999999998875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.78  E-value=3.3e-19  Score=113.58  Aligned_cols=107  Identities=26%  Similarity=0.504  Sum_probs=77.5

Q ss_pred             eeecCCCCCCHHHHH---HHHhcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV---ESVRKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~---~~~~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++....   ......    ..+.+||.   ..++.++||||||+++||+.+ +..|.+.   .++...+..
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~  241 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRS  241 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            589999999853211   011111    12556774   346788999999999999987 5556432   356666666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK  112 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~  112 (116)
                      +.....|.    .++.++.+|+.+||+.+|.+||++++|...|+.
T Consensus       242 ~~~~~~~~----~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         242 RQLLPCPE----DCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             CCcCCCcc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            65444443    789999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.78  E-value=3.6e-19  Score=116.15  Aligned_cols=110  Identities=27%  Similarity=0.467  Sum_probs=77.8

Q ss_pred             eeecCCCCCCHHHHH--HHHhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV--ESVRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||+++....  .....+     ..+.+||.   ..++.++||||||+++||+.+ +..|...    ..+...+.
T Consensus       212 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~  291 (338)
T cd05102         212 VVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLK  291 (338)
T ss_pred             cEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHh
Confidence            589999999863211  111111     23567775   346889999999999999876 4444221    23444555


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+.....|.    .+++++.+|+.+||+.+|.+||++.+|+..|+.+.+
T Consensus       292 ~~~~~~~~~----~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         292 DGTRMRAPE----NATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             cCCCCCCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            555443343    688899999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG4721|consensus

Probab=99.78  E-value=1.2e-19  Score=122.92  Aligned_cols=107  Identities=21%  Similarity=0.366  Sum_probs=76.7

Q ss_pred             eeecCCCCCCHHHHHH--HH-hcCC-CCCCCCcC---cccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhc-CCC
Q psy12612          2 RVELSDLRILRDEIVE--SV-RKGE-KCLRPNLS---ELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRK-GEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~-~~g~-~~~~p~~~---~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~-~~~   70 (116)
                      .|||||||-|+.....  +. =.|. .+++|++-   +-+.+.||||||+.+||+.+++-|+.+-   .|+.-+.. ...
T Consensus       250 ~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~  329 (904)
T KOG4721|consen  250 VVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLH  329 (904)
T ss_pred             eEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCccc
Confidence            5899999998754221  11 1132 47788762   2367899999999999999999987641   22222222 122


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK  112 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~  112 (116)
                      ++-|.    .||..+.=||++||...|.+||+|.+|+..|+-
T Consensus       330 LpvPs----tcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  330 LPVPS----TCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             ccCcc----cCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence            44444    899999999999999999999999999887653

>KOG0581|consensus

Probab=99.76  E-value=3.5e-19  Score=114.52  Aligned_cols=103  Identities=17%  Similarity=0.269  Sum_probs=78.7

Q ss_pred             eeecCCCCCCHHHHHHHHhc---C-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh--------HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVESVRK---G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT--------TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~---g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~--------~~~~~~l~   66 (116)
                      .|||||||.|..-+.. +..   | ..+++||-   ..|+.++||||||+.+||+..++.|.-.        .+++..+.
T Consensus       217 eVKicDFGVS~~lvnS-~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv  295 (364)
T KOG0581|consen  217 EVKICDFGVSGILVNS-IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV  295 (364)
T ss_pred             CEEeccccccHHhhhh-hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh
Confidence            5999999999753322 322   3 24788885   4689999999999999998877766322        25566666


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .+.   .|.+|.+.+++++...+..|+..||.+||+..+++.
T Consensus       296 ~~p---pP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  296 DEP---PPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             cCC---CCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            555   555555459999999999999999999999999864

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.75  E-value=3.8e-18  Score=107.56  Aligned_cols=110  Identities=24%  Similarity=0.455  Sum_probs=77.7

Q ss_pred             eeecCCCCCCHHHHHH---HHh-----c-CCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVE---SVR-----K-GEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~-----~-g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l   65 (116)
                      ++||+|||+++.-...   ...     . ...+.+|+.   ..++.++||||||+++||+..++.|.+.    .++...+
T Consensus       136 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~  215 (262)
T cd05058         136 TVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYL  215 (262)
T ss_pred             cEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            5899999998632110   000     0 113456664   3457789999999999999886666543    2444455


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      ..+.....+.    .++..+.+++.+||..+|++||++.+|+..|+.+..
T Consensus       216 ~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         216 LQGRRLLQPE----YCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             hcCCCCCCCC----cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            5555443333    578899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.75  E-value=2.4e-18  Score=109.70  Aligned_cols=107  Identities=23%  Similarity=0.482  Sum_probs=75.1

Q ss_pred             eeecCCCCCCHHHHHHH--HhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES--VRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++......  ...+     ..+.+||.   ..++.++||||||+++||+.+ +..|...   .++...+..
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~  241 (283)
T cd05091         162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN  241 (283)
T ss_pred             ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            58999999976321111  0011     13556664   345778999999999999876 4334221   355666666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK  112 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~  112 (116)
                      +.....|.    .++.++.+++.+||+.+|.+||++.+|...|+.
T Consensus       242 ~~~~~~~~----~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         242 RQVLPCPD----DCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             CCcCCCCC----CCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            55433333    799999999999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.75  E-value=2.9e-18  Score=108.04  Aligned_cols=108  Identities=21%  Similarity=0.438  Sum_probs=77.1

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||+++.-...     ....+   ..+.+|+.   ..++.++|+||||+++||+.. +..|...   .++...+.
T Consensus       133 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~  212 (257)
T cd05116         133 YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIE  212 (257)
T ss_pred             eEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            5899999998632110     00111   23455664   235668999999999999987 5555322   35666677


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .+.+...|.    .++.++.++|.+||..+|.+||++.+|+..|+.+
T Consensus       213 ~~~~~~~~~----~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         213 SGERMECPQ----RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             CCCCCCCCC----CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            666544444    6889999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.75  E-value=3.3e-18  Score=108.86  Aligned_cols=110  Identities=23%  Similarity=0.444  Sum_probs=78.3

Q ss_pred             eeecCCCCCCHHHHHHH---H---hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES---V---RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~---~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++.-....   .   ..+ ..+.+|+.   ..++.++||||||+++|++.+ +..|...   .++...+..
T Consensus       155 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~  234 (280)
T cd05043         155 QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD  234 (280)
T ss_pred             cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc
Confidence            58999999986311000   0   001 13456664   235778999999999999987 5555322   245555666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.+...+.    .++.++.+++.+||..+|++||++.+++..|+.+.+
T Consensus       235 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         235 GYRLAQPI----NCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             CCCCCCCC----cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            65544433    688999999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.75  E-value=5.6e-18  Score=107.31  Aligned_cols=108  Identities=21%  Similarity=0.449  Sum_probs=74.9

Q ss_pred             eeecCCCCCCHHHHHHH-Hhc------CCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES-VRK------GEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~------g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      .+||+|||+++...... ...      ...+.+|+.   ..++.++|+||||+++|++..+..+.|.    .++...+..
T Consensus       150 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  229 (272)
T cd05075         150 NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ  229 (272)
T ss_pred             CEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            58999999986321100 000      112344543   2357789999999999998774333332    355566666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      +.+...+.    .++..+.+++.+||+.+|++||++.+|...|+.+
T Consensus       230 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         230 GNRLKQPP----DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CCCCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            65433333    6888899999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.74  E-value=4.9e-18  Score=108.28  Aligned_cols=109  Identities=21%  Similarity=0.369  Sum_probs=76.8

Q ss_pred             eeecCCCCCCHHHHHH----HHh--cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE----SVR--KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~--~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++.....    ...  .+ ..+.+|+.   ..++.++||||||+++||+.+ +..|...   ..+...+..
T Consensus       147 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  226 (279)
T cd05111         147 IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK  226 (279)
T ss_pred             cEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC
Confidence            5899999998632110    000  01 13456664   346788999999999999987 5445322   234455666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.+...|.    .++.++.+++.+||..+|.+||++.++...|..+.
T Consensus       227 ~~~~~~~~----~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~  269 (279)
T cd05111         227 GERLAQPQ----ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMA  269 (279)
T ss_pred             CCcCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            66555554    57888999999999999999999999999887764

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.74  E-value=1.1e-17  Score=106.03  Aligned_cols=108  Identities=21%  Similarity=0.505  Sum_probs=77.4

Q ss_pred             eeecCCCCCCHHHHHHHHh---cC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVESVR---KG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~---~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++|++|||++.........   .+   ..+.+||.   ..++.++||||||+++|++.. +..|...   .++...+..+
T Consensus       145 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~  224 (266)
T cd05064         145 VCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG  224 (266)
T ss_pred             cEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC
Confidence            5799999987543211111   11   13456664   346788999999999999665 6666432   2556666666


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .+...|.    .++..+.+++.+||+.+|++||++.+|...|+++
T Consensus       225 ~~~~~~~----~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         225 FRLPAPR----NCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            6544443    6889999999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.74  E-value=4.3e-18  Score=107.41  Aligned_cols=109  Identities=20%  Similarity=0.402  Sum_probs=77.8

Q ss_pred             eeecCCCCCCHHHHH----HHHhcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV----ESVRKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~~~~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      .+||+|||+++....    .....+    ..+.+|+.   ..++.++||||||+++|++.. +..|...   .++...+.
T Consensus       133 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~  212 (257)
T cd05115         133 YAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIE  212 (257)
T ss_pred             cEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH
Confidence            589999999863110    001111    23556664   235678999999999999876 5555432   35566677


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+.+...|.    .++.++.++|.+||..+|++||++.+|...|+.+.
T Consensus       213 ~~~~~~~~~----~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~  256 (257)
T cd05115         213 QGKRLDCPA----ECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY  256 (257)
T ss_pred             CCCCCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence            776554444    68899999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.73  E-value=7.6e-18  Score=109.10  Aligned_cols=109  Identities=24%  Similarity=0.399  Sum_probs=76.2

Q ss_pred             eeecCCCCCCHHHHHH--H--HhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE--S--VRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~--~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      .+||+|||+++.-...  .  ...+   ..+.+|+.   ..++.++||||||+++||+.+ +..|...   .++...+..
T Consensus       147 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~  226 (316)
T cd05108         147 HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK  226 (316)
T ss_pred             cEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhC
Confidence            5899999998632110  0  0111   13556664   246788999999999999876 4444321   244455555


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.+...|.    .++.++.+++.+||..+|.+||++.+++..+..+.
T Consensus       227 ~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~  269 (316)
T cd05108         227 GERLPQPP----ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  269 (316)
T ss_pred             CCCCCCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            55544443    58889999999999999999999999999888764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.73  E-value=2.3e-17  Score=104.65  Aligned_cols=109  Identities=23%  Similarity=0.466  Sum_probs=76.4

Q ss_pred             eeecCCCCCCHHHHHHHHhc-C---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESVRK-G---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~-g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++......... +   ..+.+|+.   ..++.++|+||||+++|++.+ +..|...   .+....+..+.+
T Consensus       150 ~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~  229 (270)
T cd05047         150 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR  229 (270)
T ss_pred             eEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCC
Confidence            58999999986321111111 1   12456664   235778999999999999986 5555422   244455555554


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ...+.    .++.++.+|+.+||..+|.+||++.+++..|+.+.
T Consensus       230 ~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         230 LEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             CCCCC----cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            43443    57788999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.73  E-value=8.5e-18  Score=107.68  Aligned_cols=110  Identities=26%  Similarity=0.484  Sum_probs=79.0

Q ss_pred             eeecCCCCCCHHHHHH---HHhc----CCCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE---SVRK----GEKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~----g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||++......   ....    ...+.+||.   ..++.++||||||+++|++.+ +..|.+.   .++...+..
T Consensus       161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  240 (291)
T cd05094         161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ  240 (291)
T ss_pred             cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC
Confidence            5899999998632110   0111    113556774   345778999999999999987 6666432   245555666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.....+.    .++.++.+++.+||..+|++||++.++...|+.+.+
T Consensus       241 ~~~~~~~~----~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         241 GRVLERPR----VCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             CCCCCCCc----cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            55444443    578899999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.72  E-value=1.8e-17  Score=106.52  Aligned_cols=109  Identities=22%  Similarity=0.446  Sum_probs=76.8

Q ss_pred             eeecCCCCCCHHHHHH--HHhc--CCCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE--SVRK--GEKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~--g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++......  ....  ...+.+|+.   ..++.++||||||+++|++.+ +..|...   .++...+..+..
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~  236 (297)
T cd05089         157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR  236 (297)
T ss_pred             eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC
Confidence            5899999998632110  0001  123556765   235789999999999999986 5555322   245555555554


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ...|.    .++.++.+|+.+||..+|.+||++.+|+..|..+.
T Consensus       237 ~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~  276 (297)
T cd05089         237 MEKPR----NCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML  276 (297)
T ss_pred             CCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            43443    68889999999999999999999999999887764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.72  E-value=1.7e-17  Score=104.83  Aligned_cols=108  Identities=24%  Similarity=0.466  Sum_probs=75.8

Q ss_pred             eeecCCCCCCHHHHHHH--HhcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES--VRKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      .+||+|||++.......  ...+    ..+.+|+.   ..++.++||||||+++|++.+ +..|...   .+....+..+
T Consensus       142 ~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~  221 (263)
T cd05052         142 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG  221 (263)
T ss_pred             cEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC
Confidence            58999999986321110  0001    12456664   235778999999999999987 4444321   2445556655


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .+...|.    .++.++.+++.+||..+|++||++.++...|+.+
T Consensus       222 ~~~~~~~----~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         222 YRMERPE----GCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            5444443    6889999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.72  E-value=2.1e-17  Score=105.73  Aligned_cols=109  Identities=22%  Similarity=0.437  Sum_probs=77.4

Q ss_pred             eeecCCCCCCHHHHH--HHHh-----cCCCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV--ESVR-----KGEKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~-----~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      .+||+|||+++....  ....     ....+.+|+.   ..++.++||||||+++|++.+ +..|...   .++...+..
T Consensus       165 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~  244 (290)
T cd05045         165 KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKT  244 (290)
T ss_pred             cEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhC
Confidence            589999999863211  0010     0113445653   235778999999999999987 4444221   355666666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.+...|.    .++.++.+++..||+.+|.+||++.+++..|+++.
T Consensus       245 ~~~~~~~~----~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         245 GYRMERPE----NCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM  287 (290)
T ss_pred             CCCCCCCC----CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence            66554444    68889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.72  E-value=5.5e-18  Score=112.24  Aligned_cols=109  Identities=25%  Similarity=0.441  Sum_probs=75.8

Q ss_pred             eeecCCCCCCHHHHHH---HHhc----CCCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE---SVRK----GEKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~----g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||+++.....   ....    ...+.+||.   ..++.++||||||+++|++.. +..|...    ..+...+.
T Consensus       250 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~  329 (374)
T cd05106         250 VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVK  329 (374)
T ss_pred             eEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHH
Confidence            5899999998632110   0111    113566774   346789999999999999886 5555322    12333444


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+.....|.    ..+.++.+++.+||+.+|.+||++.+|+..|+++.
T Consensus       330 ~~~~~~~~~----~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         330 RGYQMSRPD----FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             cccCccCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            454444443    56789999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.72  E-value=1.2e-17  Score=106.16  Aligned_cols=106  Identities=25%  Similarity=0.502  Sum_probs=75.3

Q ss_pred             eeecCCCCCCHHHHHHH--HhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES--VRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      .+||+|||++.......  ...+     ..+.+||.   ..++.++||||||+++|++.. +..|.+.   .+....+..
T Consensus       160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~  239 (280)
T cd05049         160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ  239 (280)
T ss_pred             eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            58999999986311100  0011     13567775   346788999999999999987 6666442   345555555


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      +.....+.    .++.++.+++.+||..+|++||++.+|+..|+
T Consensus       240 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         240 GRLLQRPR----TCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             CCcCCCCC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            55433333    68899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.71  E-value=6e-17  Score=102.37  Aligned_cols=110  Identities=15%  Similarity=0.286  Sum_probs=75.8

Q ss_pred             eeecCCCCCCHHHHH--HHH--hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIV--ESV--RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~--~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~~~~l~~~   68 (116)
                      .+||+|||++.....  ...  ..| ..+.+|+.   ..++.++|+||||+++|++..+..|.+.     ..+...+..+
T Consensus       144 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~  223 (267)
T cd08228         144 VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQC  223 (267)
T ss_pred             CEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcC
Confidence            489999998753111  111  112 23556764   2357789999999999999988887543     1333444433


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .   .|..+....+..+.++|.+||..+|++||++.+|+..++.+.
T Consensus       224 ~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         224 D---YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             C---CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            3   222222356788999999999999999999999999988763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.71  E-value=2.5e-17  Score=106.10  Aligned_cols=110  Identities=21%  Similarity=0.459  Sum_probs=78.7

Q ss_pred             eeecCCCCCCHHHHH----HHHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV----ESVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      ++||+|||+++....    .....+   ..+.+|+.   ..++.++||||||+++|++.....+.+.    .++...+..
T Consensus       175 ~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~  254 (304)
T cd05101         175 VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE  254 (304)
T ss_pred             cEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc
Confidence            589999999863210    011111   13556764   3367889999999999998774333322    356666666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.+...|.    .++.++.+++.+||..+|.+||++.+++..|+.+..
T Consensus       255 ~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         255 GHRMDKPA----NCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             CCcCCCCC----CCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence            66554444    688999999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.71  E-value=1.8e-17  Score=108.38  Aligned_cols=110  Identities=25%  Similarity=0.459  Sum_probs=77.4

Q ss_pred             eeecCCCCCCHHHHH--HHHhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV--ESVRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||+++.-..  .....+     ..+.+||.   ..++.++||||||+++|++.+ +..|+..    ..+...+.
T Consensus       211 ~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~  290 (337)
T cd05054         211 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLK  290 (337)
T ss_pred             cEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHh
Confidence            589999999864211  111111     13566774   346788999999999999876 5545321    23444555


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+.+...|.    .++.++.+++.+||+.+|++||++.+|+..|+.+.+
T Consensus       291 ~~~~~~~~~----~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         291 EGTRMRAPE----YATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             ccCCCCCCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            555444443    577889999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.71  E-value=8.4e-18  Score=111.38  Aligned_cols=108  Identities=26%  Similarity=0.432  Sum_probs=75.8

Q ss_pred             eeecCCCCCCHHHHH--HHHhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV--ESVRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~----~~~~~~l~   66 (116)
                      .+||+|||+++....  .....|     ..+.+||.   ..++.++||||||+++|++.+ +..|...    ..+...+.
T Consensus       252 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~  331 (375)
T cd05104         252 ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK  331 (375)
T ss_pred             cEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH
Confidence            489999999863211  011111     13556775   246788999999999999876 4434211    24455566


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .+.+...|.    ..+.++.+|+.+||+.||++||++.+|+..|+..
T Consensus       332 ~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         332 EGYRMLSPE----CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             hCccCCCCC----CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            666554454    5678999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.71  E-value=1.8e-17  Score=104.88  Aligned_cols=108  Identities=23%  Similarity=0.481  Sum_probs=75.6

Q ss_pred             eeecCCCCCCHHHHHHH------Hhc-CCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES------VRK-GEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~------~~~-g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      ++||+|||+++......      ... ...+.+|+.   ..++.++||||||+++||+..+..+.+.    .++...+..
T Consensus       151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~  230 (273)
T cd05035         151 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRH  230 (273)
T ss_pred             eEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            58999999986321110      000 112345553   2356789999999999998873333332    255566666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      +.....|.    .++.++.+++.+||+.||++||++.++...|+.+
T Consensus       231 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         231 GNRLKQPE----DCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CCCCCCCc----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            65444443    6889999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.71  E-value=2.7e-17  Score=103.52  Aligned_cols=105  Identities=28%  Similarity=0.451  Sum_probs=73.9

Q ss_pred             eeecCCCCCCHHHHHHHH--hcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVESV--RKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      .+||+|||+++.......  ..+    ..+.+|+.   ..++.++|+||||+++|++.+ +..|...   .+....+..+
T Consensus       138 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~  217 (256)
T cd05114         138 VVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG  217 (256)
T ss_pred             eEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC
Confidence            589999998864211100  011    13556764   235778999999999999888 4444321   2556667666


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      .+...|.    ..+.++.+++.+||..+|++||++.+|+..|
T Consensus       218 ~~~~~~~----~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         218 FRLYRPK----LASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            6555554    4677899999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0591|consensus

Probab=99.71  E-value=4.9e-17  Score=102.28  Aligned_cols=98  Identities=16%  Similarity=0.285  Sum_probs=73.3

Q ss_pred             eeecCCCCCCHHHH----HHHHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEI----VESVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~----~~~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .|||+||||++.-.    ....-.|. .++.||.   ..|+.+|||||+|..++|+.....|+..   .++...+++|.-
T Consensus       166 vvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~  245 (375)
T KOG0591|consen  166 VVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY  245 (375)
T ss_pred             ceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC
Confidence            59999999987421    11111233 3677886   4689999999999999999888877654   266677777763


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCC
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPD  102 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~  102 (116)
                      +   ++|..-.+.++.+|+..|...|++.||+
T Consensus       246 ~---~~p~~~YS~~l~~li~~ci~vd~~~RP~  274 (375)
T KOG0591|consen  246 P---PLPDEHYSTDLRELINMCIAVDPEQRPD  274 (375)
T ss_pred             C---CCcHHHhhhHHHHHHHHHccCCcccCCC
Confidence            3   3333367788999999999999999998

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.70  E-value=3e-17  Score=105.00  Aligned_cols=110  Identities=25%  Similarity=0.490  Sum_probs=77.9

Q ss_pred             eeecCCCCCCHHHHHH-H-HhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE-S-VRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~-~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++..... . ...+     ..+.+|+.   ..++.++|+||||+++|++.. +..|...   ..+...+..
T Consensus       158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~  237 (288)
T cd05093         158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ  237 (288)
T ss_pred             cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            5899999998632110 0 0011     13456764   235778999999999999987 5544322   245556666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.....+.    .++.++.+|+.+||+.+|.+||++.++...|+.+.+
T Consensus       238 ~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         238 GRVLQRPR----TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             CCcCCCCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            65433333    577899999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.70  E-value=3.6e-17  Score=104.16  Aligned_cols=110  Identities=22%  Similarity=0.387  Sum_probs=75.8

Q ss_pred             eeecCCCCCCHHHHHH----HHhc---CCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE----SVRK---GEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~---g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      .+||+|||+++.-...    ....   ...+.+|+.   ..++.++||||||+++||+.....+.+.    ..+...+..
T Consensus       147 ~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~  226 (279)
T cd05109         147 HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK  226 (279)
T ss_pred             cEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC
Confidence            4899999988532110    0101   112455664   2357789999999999998774333332    245555666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.....+.    .++.++.+++.+||..||.+||++.++...|..+.+
T Consensus       227 ~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05109         227 GERLPQPP----ICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR  270 (279)
T ss_pred             CCcCCCCc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            55443333    688899999999999999999999999998887753

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.70  E-value=4.4e-17  Score=102.59  Aligned_cols=105  Identities=30%  Similarity=0.508  Sum_probs=74.5

Q ss_pred             eeecCCCCCCHHHHHHHH--hcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCCC-CCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVESV--RKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDPS-ERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~-~~p~~~---~~~~~~l~~~   68 (116)
                      .+||+|||+++.......  ..+    ..+.+|+.   ..++.++|+||||+++|++.+. ..|...   .+....+..+
T Consensus       138 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~  217 (256)
T cd05059         138 VVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG  217 (256)
T ss_pred             cEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC
Confidence            489999999864321111  111    13556664   3457789999999999998874 444221   2455666666


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      .+...|.    .++.++.+++.+||..+|++||++.+++..|
T Consensus       218 ~~~~~~~----~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         218 YRLYRPK----LAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CcCCCCC----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            6555554    5889999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.70  E-value=3e-17  Score=103.35  Aligned_cols=109  Identities=24%  Similarity=0.484  Sum_probs=76.8

Q ss_pred             eeecCCCCCCHHHHHH--HH---hcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE--SV---RKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~---~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      .+||+|||+++.-...  ..   ..+   ..+.+|+.   ..++.++|+||||+++|++.. +..|...   .++...+.
T Consensus       133 ~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~  212 (257)
T cd05060         133 QAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLE  212 (257)
T ss_pred             cEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH
Confidence            5899999998632110  00   011   12455664   235678999999999999987 4444321   24555666


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+.....|.    .++..+.+++.+||..+|++||++.++...|+.+.
T Consensus       213 ~~~~~~~~~----~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         213 SGERLPRPE----ECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             cCCcCCCCC----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            665544554    68899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.70  E-value=1.7e-17  Score=104.47  Aligned_cols=108  Identities=22%  Similarity=0.413  Sum_probs=74.4

Q ss_pred             eeecCCCCCCHHHHHHHH--hcCCCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVESV--RKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      ++||+|||+++.......  .....+.+|+.   ..++.++||||||+++|++.. +..|...   .++...+..+....
T Consensus       140 ~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~  219 (256)
T cd05082         140 VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD  219 (256)
T ss_pred             cEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCC
Confidence            589999999864211100  00112445654   235778999999999999876 4444221   24555566655443


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .+.    .++..+.+++.+||..+|++||++.++...|+.+
T Consensus       220 ~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         220 APD----GCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             CCC----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            333    6889999999999999999999999999888753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.69  E-value=2.6e-17  Score=109.91  Aligned_cols=110  Identities=25%  Similarity=0.447  Sum_probs=77.7

Q ss_pred             eeecCCCCCCHHHHHH--HHhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE--SVRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~----~~~~~~l~   66 (116)
                      .+||+|||+++.....  ....+     ..+.+||.   ..++.++||||||+++|++.. +..|...    ..+...+.
T Consensus       275 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~  354 (400)
T cd05105         275 IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIK  354 (400)
T ss_pred             EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHh
Confidence            5899999998632111  01111     12456764   235788999999999999875 5555322    13444555


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+.+...+.    .++.++.+++.+||..+|++||++.+|...|+.+.+
T Consensus       355 ~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         355 SGYRMAKPD----HATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             cCCCCCCCc----cCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence            565544443    688999999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.69  E-value=8.7e-17  Score=101.73  Aligned_cols=108  Identities=24%  Similarity=0.467  Sum_probs=76.0

Q ss_pred             eeecCCCCCCHHHHH--HHH--h-cC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV--ESV--R-KG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~--~-~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      .+||+|||++.....  ...  . .+   ..+..|+.   ..++.++|+||||+++|++.. +..|...   .++...+.
T Consensus       145 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~  224 (268)
T cd05063         145 ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIN  224 (268)
T ss_pred             cEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh
Confidence            579999999853211  000  0 01   12455664   345778999999999999776 6666432   25555666


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .+.+.+.+.    .++.++.+++.+||..+|++||++.+|...|+++
T Consensus       225 ~~~~~~~~~----~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         225 DGFRLPAPM----DCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             cCCCCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            555443333    6888999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.69  E-value=4.9e-17  Score=102.58  Aligned_cols=108  Identities=24%  Similarity=0.419  Sum_probs=74.7

Q ss_pred             eeecCCCCCCHHHHHH--HHhcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE--SVRKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      .+||+|||++......  ....|    ..+.+|+.   ..++.++|+||||+++|++.+ +..|...   .++...+..+
T Consensus       141 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~  220 (261)
T cd05068         141 ICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG  220 (261)
T ss_pred             CEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence            4899999987532110  01112    13456775   235778999999999999987 4444221   2455555555


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .....+.    .++..+.+++.+||..+|.+||++.+|...|+.+
T Consensus       221 ~~~~~~~----~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         221 YRMPCPP----GCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             CCCCCCC----cCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            4433332    6788999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.69  E-value=3.6e-17  Score=103.08  Aligned_cols=105  Identities=30%  Similarity=0.489  Sum_probs=72.7

Q ss_pred             eeecCCCCCCHHHHHHH--HhcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES--VRKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||+++......  ...+    ..+..|+.   ..++.++|+||||+++|++.+ +..|...   .++...+..+
T Consensus       138 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~  217 (256)
T cd05113         138 CVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQG  217 (256)
T ss_pred             CEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcC
Confidence            58999999876321100  0001    12445654   235778999999999999987 5555321   2455566666


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      .+...+.    ..+..+.+++.+||+.+|++||++.+|+..|
T Consensus       218 ~~~~~~~----~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~  255 (256)
T cd05113         218 LRLYRPH----LASEKVYAIMYSCWHEKAEERPTFQQLLSSI  255 (256)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence            6544444    5678899999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.68  E-value=4.2e-17  Score=104.43  Aligned_cols=109  Identities=23%  Similarity=0.456  Sum_probs=76.8

Q ss_pred             eeecCCCCCCHHHHHH----HHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE----SVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      .+||+|||+++.-...    ....+   ..+.+||.   ..++.++||||||+++|++.. +..|...   .++...+..
T Consensus       170 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  249 (293)
T cd05053         170 VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE  249 (293)
T ss_pred             eEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHc
Confidence            5899999998632110    01111   12456764   236778999999999999876 4444221   255556666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.....|.    .++.++.+|+.+||..+|++||++.+++..|+.+.
T Consensus       250 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         250 GYRMEKPQ----NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             CCcCCCCC----CCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            65444443    68889999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.68  E-value=5.7e-17  Score=102.23  Aligned_cols=108  Identities=21%  Similarity=0.398  Sum_probs=74.9

Q ss_pred             eeecCCCCCCHHHHHHH--Hhc----CCCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES--VRK----GEKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~----g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||+++......  ...    ...+.+|+.   ..++.++|+||||+++|++.+ +..|...   .++...+..+
T Consensus       141 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~  220 (261)
T cd05072         141 MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG  220 (261)
T ss_pred             cEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC
Confidence            58999999986321000  001    113455664   235678999999999999987 5544321   2455566656


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .+...+.    .++.++.+++.+||..+|++||++++|...|+++
T Consensus       221 ~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         221 YRMPRME----NCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            5443332    5788999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.68  E-value=1.3e-16  Score=100.30  Aligned_cols=107  Identities=24%  Similarity=0.487  Sum_probs=74.6

Q ss_pred             eeecCCCCCCHHHHHHHHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~~~   71 (116)
                      ++||+|||+++.... ....+   ..+.+|+.   ..++.++|+||||+++|++...+++.|.    .++...+..+.+.
T Consensus       140 ~~~l~d~g~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~  218 (256)
T cd05039         140 VAKVSDFGLAKEASQ-GQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM  218 (256)
T ss_pred             CEEEccccccccccc-ccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC
Confidence            579999999864321 11111   12455664   3457789999999999998763333322    3555566655544


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      ..|.    .+++++.+++.+||..+|++||++.+++..|+.+
T Consensus       219 ~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         219 EAPE----GCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             CCcc----CCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            3343    6789999999999999999999999999888753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.68  E-value=7.8e-17  Score=104.32  Aligned_cols=109  Identities=24%  Similarity=0.465  Sum_probs=76.6

Q ss_pred             eeecCCCCCCHHHHH----HHHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV----ESVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++....    .....+   ..+.+||.   ..++.++|+||||+++|++.. +..|...   .++...+..
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~  251 (314)
T cd05099         172 VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLRE  251 (314)
T ss_pred             cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            589999999863210    111111   13556664   235778999999999999876 4444221   245556666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.....|.    .++.++.+++.+||..+|++||++.++...|..+.
T Consensus       252 ~~~~~~~~----~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~  294 (314)
T cd05099         252 GHRMDKPS----NCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL  294 (314)
T ss_pred             CCCCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            55444443    68889999999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.68  E-value=5.7e-17  Score=103.36  Aligned_cols=106  Identities=25%  Similarity=0.467  Sum_probs=73.0

Q ss_pred             eeecCCCCCCHHHHHH---HHhc----CCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCC-h---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE---SVRK----GEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDF-T---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~----g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~-~---~~~~~~l~~   67 (116)
                      .+||+|||+++.....   ....    ...+.+|+.   ..++.++||||||+++|++.....+.| .   .+....+..
T Consensus       160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  239 (280)
T cd05092         160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQ  239 (280)
T ss_pred             CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHc
Confidence            5899999998532110   0000    113455664   235778999999999999987434433 2   244455555


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      +.....|.    .++.++.+++.+||..+|.+||++.+|...|+
T Consensus       240 ~~~~~~~~----~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         240 GRELERPR----TCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             CccCCCCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            55444443    68899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.68  E-value=1.6e-16  Score=102.52  Aligned_cols=110  Identities=23%  Similarity=0.458  Sum_probs=77.1

Q ss_pred             eeecCCCCCCHHHHH----HHHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV----ESVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++....    .....+   ..+.+|+.   ..++.++|+||||+++|++.. +..|...   .++...+..
T Consensus       178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~  257 (307)
T cd05098         178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE  257 (307)
T ss_pred             cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHc
Confidence            589999999863211    111111   13556764   235788999999999999887 4444221   245555655


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.+...|.    .++.++.+|+.+||..+|++||++.+++..|+.+.+
T Consensus       258 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~  301 (307)
T cd05098         258 GHRMDKPS----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA  301 (307)
T ss_pred             CCCCCCCC----cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence            55444443    678899999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.68  E-value=9e-17  Score=107.37  Aligned_cols=109  Identities=23%  Similarity=0.418  Sum_probs=75.7

Q ss_pred             eeecCCCCCCHHHHHH--HHhc-----CCCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE--SVRK-----GEKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~-----g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||+++.....  ....     ...+.+|+.   ..++.++|+||||+++||+.. +..|...    ......+.
T Consensus       277 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~  356 (401)
T cd05107         277 LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIK  356 (401)
T ss_pred             EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHH
Confidence            5899999998632110  0111     122455654   235778999999999999876 4444211    23344555


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+.++..|.    .++.++.+|+.+||..+|.+||++.+|+..|+.+.
T Consensus       357 ~~~~~~~p~----~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         357 RGYRMAKPA----HASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             cCCCCCCCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            565544443    67899999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.68  E-value=5.4e-17  Score=102.02  Aligned_cols=106  Identities=23%  Similarity=0.459  Sum_probs=73.2

Q ss_pred             eeecCCCCCCHHHHHH--HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVE--SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~~~~   72 (116)
                      .+||+|||+++.....  .......+.+|+.   ..++.++|+||||+++|++...+++.|.    .+....+..+.+..
T Consensus       138 ~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~  217 (254)
T cd05083         138 VAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRME  217 (254)
T ss_pred             cEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCC
Confidence            5899999988532110  0000112445653   3457789999999999998874444332    24555666665443


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      .+.    .++..+.+++.+||+.+|.+||++.+|...|+
T Consensus       218 ~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  252 (254)
T cd05083         218 PPE----GCPADVYVLMTSCWETEPKKRPSFHKLREKLE  252 (254)
T ss_pred             CCC----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence            333    67889999999999999999999999988775

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.68  E-value=6.5e-17  Score=102.69  Aligned_cols=106  Identities=22%  Similarity=0.478  Sum_probs=73.5

Q ss_pred             eeecCCCCCCHHHHHHHH--hcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVESV--RKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++.-.....  ..+     ..+.+|+.   ..++.++||||||+++|++.+ +..|...   .++...+..
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  236 (277)
T cd05032         157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID  236 (277)
T ss_pred             CEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc
Confidence            589999999864211100  011     12455664   235778999999999999987 4444221   245555555


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      +.....|.    .++.++.+++.+||..+|++||++.+|+..|+
T Consensus       237 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         237 GGHLDLPE----NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             CCCCCCCC----CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            54444443    67899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.68  E-value=1.2e-16  Score=101.77  Aligned_cols=106  Identities=25%  Similarity=0.448  Sum_probs=72.1

Q ss_pred             eeecCCCCCCHHHHHHH--HhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES--VRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      .+||+|||+++.-....  ...+     ..+.+|+.   ..++.++||||||+++|++.....+.|.    .++...+..
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~  236 (277)
T cd05036         157 VAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG  236 (277)
T ss_pred             ceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            48999999986421000  0011     12455664   3467899999999999998763333332    244555544


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      +.+...|.    .++.++.+++.+||..+|++||++.+++..|+
T Consensus       237 ~~~~~~~~----~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         237 GGRLDPPK----GCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CCcCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            44433333    68889999999999999999999999988775

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.68  E-value=9.5e-17  Score=105.18  Aligned_cols=110  Identities=25%  Similarity=0.434  Sum_probs=76.9

Q ss_pred             eeecCCCCCCHHHHH--HHHhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV--ESVRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||++.....  .....+     ..+.+|+.   ..++.++|+||||+++|++.. +..|...    .++...+.
T Consensus       217 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~  296 (343)
T cd05103         217 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK  296 (343)
T ss_pred             cEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh
Confidence            589999999864211  111111     13556764   346788999999999999875 4444321    23445555


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+.+...|.    ..++++.+++..||+.+|.+||++.+|+..|+.+.+
T Consensus       297 ~~~~~~~~~----~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         297 EGTRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             ccCCCCCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            565544443    466789999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.68  E-value=9.3e-17  Score=101.19  Aligned_cols=108  Identities=19%  Similarity=0.393  Sum_probs=74.4

Q ss_pred             eeecCCCCCCHHHHHHH-HhcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEIVES-VRKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~~   69 (116)
                      ++||+|||++....... ...+    ..+..|+.   ..++.++|+||||+++|++.+ +..|...   .++...+..+.
T Consensus       142 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~  221 (261)
T cd05148         142 VCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY  221 (261)
T ss_pred             eEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCC
Confidence            58999999986321100 0001    11334553   235778999999999999987 4444321   24555566665


Q ss_pred             CCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         70 KCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        70 ~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      +...|.    .++.++.++|.+||..+|++||++.+|...|+.+
T Consensus       222 ~~~~~~----~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         222 RMPCPA----KCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             cCCCCC----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            544443    6889999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.68  E-value=1.2e-16  Score=104.28  Aligned_cols=109  Identities=22%  Similarity=0.472  Sum_probs=76.9

Q ss_pred             eeecCCCCCCHHHHH----HHHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV----ESVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      ++||+|||+++....    .....+   ..+.+|+.   ..++.++||||||+++|++.....+.|.    .++...+..
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  251 (334)
T cd05100         172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE  251 (334)
T ss_pred             cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            589999999863210    000111   12556764   2367789999999999998874333332    355556666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.+...|.    .++.++.+++.+||+.+|.+||++.+|+..|+.+.
T Consensus       252 ~~~~~~~~----~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~  294 (334)
T cd05100         252 GHRMDKPA----NCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL  294 (334)
T ss_pred             CCCCCCCC----CCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence            55544443    67889999999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.67  E-value=1.5e-16  Score=102.60  Aligned_cols=109  Identities=23%  Similarity=0.461  Sum_probs=74.7

Q ss_pred             eeecCCCCCCHHHHHHHHh-cC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESVR-KG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~-~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++........ .+   ..+.+|+.   ..++.++||||||+++|++.+ +..|...   .+....+..+.+
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~  241 (303)
T cd05088         162 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR  241 (303)
T ss_pred             cEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCc
Confidence            5899999998632111110 01   13456664   235778999999999999987 5555322   234444544444


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ...|.    .++.++.+|+.+||+.+|++||++.+++..|..+.
T Consensus       242 ~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~  281 (303)
T cd05088         242 LEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  281 (303)
T ss_pred             CCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            33333    57788999999999999999999999998887654

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.67  E-value=1.1e-16  Score=101.17  Aligned_cols=110  Identities=18%  Similarity=0.315  Sum_probs=74.6

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~~~~l~~~   68 (116)
                      ++||+|||++.......    ...| ..+.+|+.   ..++.++|+||||+++|++..+..|...     .+....+...
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  223 (267)
T cd08229         144 VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC  223 (267)
T ss_pred             CEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC
Confidence            58999999875321100    0112 23445664   2356789999999999999888777543     1222333322


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .   .|..+....+.++.+++.+||..+|++||++.+|.+.++++.
T Consensus       224 ~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         224 D---YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             C---CCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            2   232333357889999999999999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.67  E-value=1.1e-16  Score=102.01  Aligned_cols=107  Identities=23%  Similarity=0.495  Sum_probs=74.0

Q ss_pred             eeecCCCCCCHHHHHH---HHhc----CCCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE---SVRK----GEKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~----g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      .+||+|||++......   ....    ...+.+|+.   ..++.++|+||||+++|++.+ +..|...   ..+...+..
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  241 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRK  241 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            5899999998642111   0000    112456664   235778999999999999887 4444322   245555555


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK  112 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~  112 (116)
                      +..+..|.    .++..+.+++.+||..+|.+||++.+|...|..
T Consensus       242 ~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         242 RQLLPCSE----DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             CCcCCCCC----CCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            44333333    688999999999999999999999999888764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.67  E-value=1.2e-16  Score=100.72  Aligned_cols=107  Identities=23%  Similarity=0.424  Sum_probs=74.1

Q ss_pred             eeecCCCCCCHHHHHH--HHhcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE--SVRKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      ++||+|||++......  ....+    ..+.+|+.   ..++.++|+||||+++|++.+++.+.|.    .++...+..+
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~  219 (260)
T cd05070         140 VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG  219 (260)
T ss_pred             eEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence            5899999998531110  11111    13556764   2357789999999999999874444332    2455555555


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK  112 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~  112 (116)
                      .+...+.    ..+..+.+++.+||..+|++||++.++...|+.
T Consensus       220 ~~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         220 YRMPCPQ----DCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCCCCCC----cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            4443343    678899999999999999999999999988875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.67  E-value=1.4e-16  Score=100.93  Aligned_cols=108  Identities=24%  Similarity=0.456  Sum_probs=73.3

Q ss_pred             eeecCCCCCCHHHHHHH-HhcC------CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES-VRKG------EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g------~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      ++||+|||+++...... ...+      ..+..|+.   ..++.++||||||+++|++.....+.+.    .++...+..
T Consensus       151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  230 (273)
T cd05074         151 TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIK  230 (273)
T ss_pred             CEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHc
Confidence            68999999986321100 0000      12234443   2357789999999999998874444432    234445555


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      +.....+.    .++..+.+++.+||+.+|++||++.++...|+.+
T Consensus       231 ~~~~~~~~----~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         231 GNRLKQPP----DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CCcCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            54433332    5778999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.67  E-value=1.3e-16  Score=101.97  Aligned_cols=107  Identities=23%  Similarity=0.470  Sum_probs=73.8

Q ss_pred             eeecCCCCCCHHHHHH---HHhc----CCCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE---SVRK----GEKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~----g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++.....   ....    ...+.+|+.   ..++.++||||||+++|++.. +..|.+.   .++...+..
T Consensus       168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~  247 (288)
T cd05050         168 VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRD  247 (288)
T ss_pred             ceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc
Confidence            5899999998531100   0000    112445664   345778999999999999876 4445432   355556665


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK  112 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~  112 (116)
                      +.....|.    .++.++.+++.+||..+|++||++.++...|++
T Consensus       248 ~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         248 GNVLSCPD----NCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             CCCCCCCC----CCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            55433333    678899999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.67  E-value=1.9e-16  Score=100.11  Aligned_cols=108  Identities=22%  Similarity=0.481  Sum_probs=76.4

Q ss_pred             eeecCCCCCCHHHHH--HHH--hcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV--ESV--RKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~--~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      .+||+|||+++....  ...  ..+   ..+.+|+.   ..++.++||||||+++|++.. +..|...   .++...+..
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~  223 (266)
T cd05033         144 VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVED  223 (266)
T ss_pred             CEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHc
Confidence            479999999864210  000  011   12455664   335678999999999999776 5555432   355566666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      +.+...+.    .++..+.+++.+||+.+|++||++.+|...|+.+
T Consensus       224 ~~~~~~~~----~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         224 GYRLPPPM----DCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CCCCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            65544443    6889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.66  E-value=8.5e-17  Score=103.63  Aligned_cols=106  Identities=20%  Similarity=0.421  Sum_probs=68.4

Q ss_pred             eeecCCCCCCHHHHHH---HHhc----CCCCCCCCc---CcccCHHHHHHHHHHhcccCC--CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE---SVRK----GEKCLRPNL---SELTCEEEVTAIMKRCWNEDP--SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~----g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~--~~~p~~~---~~~~~~l~   66 (116)
                      .+||+|||+++.....   ....    ...+.+||.   ..++.++||||||+++|++..  ...|...   .++...+.
T Consensus       176 ~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~  255 (304)
T cd05096         176 TIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAG  255 (304)
T ss_pred             cEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHH
Confidence            5899999998632100   0000    123556764   346789999999999999754  2233211   23332222


Q ss_pred             ----cCCC---CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         67 ----KGEK---CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        67 ----~~~~---~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                          ....   ...|.    .++..+.+||.+||..+|++||++.+|...|+
T Consensus       256 ~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         256 EFFRDQGRQVYLFRPP----PCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHhhhccccccccCCC----CCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence                1111   12222    68899999999999999999999999988775

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.66  E-value=2.7e-16  Score=101.33  Aligned_cols=109  Identities=24%  Similarity=0.418  Sum_probs=75.1

Q ss_pred             eeecCCCCCCHHHHH--HHH-hcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV--ESV-RKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~-~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++.-..  ... ..+    ..+.+|+.   ..++.++||||||+++|++.+ ++.|...   .++...+..
T Consensus       147 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~  226 (303)
T cd05110         147 HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK  226 (303)
T ss_pred             ceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC
Confidence            589999999863211  000 011    12445553   235778999999999999876 5555322   244455555


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.+...+.    .++..+.+++.+||..+|++||++.+++..|+.+.
T Consensus       227 ~~~~~~~~----~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~  269 (303)
T cd05110         227 GERLPQPP----ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA  269 (303)
T ss_pred             CCCCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            55443333    57788999999999999999999999999888764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.66  E-value=1.1e-16  Score=109.53  Aligned_cols=103  Identities=17%  Similarity=0.219  Sum_probs=72.9

Q ss_pred             eeecCCCCCCHHHHH---HHH---hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIV---ESV---RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~---~~~---~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||+++....   ...   ..| ..+.+||.   ..++.++||||||+++|++..+..|...   .++...+..+
T Consensus       181 ~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~  260 (496)
T PTZ00283        181 LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAG  260 (496)
T ss_pred             CEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC
Confidence            589999999863211   000   012 23567775   3468899999999999999988877543   2444444444


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .....|.    .+++++.+++.+||+.+|.+||++.+++.
T Consensus       261 ~~~~~~~----~~~~~l~~li~~~L~~dP~~RPs~~ell~  296 (496)
T PTZ00283        261 RYDPLPP----SISPEMQEIVTALLSSDPKRRPSSSKLLN  296 (496)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence            4333333    68899999999999999999999999865

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.66  E-value=2.9e-16  Score=99.37  Aligned_cols=106  Identities=24%  Similarity=0.561  Sum_probs=72.4

Q ss_pred             eeecCCCCCCHHHHHHHH--hcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVESV--RKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      .+||+|||+++.......  ..+     ..+.+|+.   ..++.++||||||+++|++.+ +..|...   .+....+..
T Consensus       149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  228 (269)
T cd05044         149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA  228 (269)
T ss_pred             ceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc
Confidence            589999999863211100  011     23455664   235778999999999999876 4444221   244444444


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      +.+...+.    .++..+.+++.+||..+|.+||++.+|...|+
T Consensus       229 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         229 GGRLQKPE----NCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             CCccCCcc----cchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            44433333    68889999999999999999999999988875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.66  E-value=3.6e-16  Score=98.85  Aligned_cols=109  Identities=23%  Similarity=0.395  Sum_probs=75.2

Q ss_pred             eeecCCCCCCHHHHH-H-HHhc---C-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIV-E-SVRK---G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-~-~~~~---g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      ++||+|||++..-.. . ....   + ..+..|+.   ..++.++|+||||+++|++.++..+.|.    .++...+..+
T Consensus       140 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~  219 (262)
T cd05071         140 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG  219 (262)
T ss_pred             cEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcC
Confidence            589999998852110 0 0000   1 12456664   2357789999999999999884444332    2445555555


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .....+.    .++..+.+++.+||+.+|++||++.++...|+...
T Consensus       220 ~~~~~~~----~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  261 (262)
T cd05071         220 YRMPCPP----ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  261 (262)
T ss_pred             CCCCCcc----ccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence            4332222    57889999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.66  E-value=1.9e-16  Score=99.51  Aligned_cols=105  Identities=25%  Similarity=0.486  Sum_probs=73.4

Q ss_pred             eeecCCCCCCHHHHHHHH--hcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVESV--RKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      .+||+|||+++.......  ..+    ..+.+|+.   ..++.++|+||||+++|++.. +..|...   ..+...+..+
T Consensus       138 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  217 (256)
T cd05112         138 VVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG  217 (256)
T ss_pred             eEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC
Confidence            489999998863211111  111    12455664   335678999999999999877 4444321   3556666666


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      .+...|.    ..+.++.+|+.+||+.+|++||++.+++..|
T Consensus       218 ~~~~~~~----~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         218 FRLYKPR----LASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            6555554    4678899999999999999999999998776

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.65  E-value=4.3e-16  Score=97.60  Aligned_cols=106  Identities=25%  Similarity=0.449  Sum_probs=71.8

Q ss_pred             eeecCCCCCCHHHHHHHH-hcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVESV-RKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      .+||+|||+++....... ..+     ..+.+|+.   ..++.++|+||||+++|++.+.+.+.|.    ......+..+
T Consensus       131 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~  210 (250)
T cd05085         131 VLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG  210 (250)
T ss_pred             eEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC
Confidence            589999999863211100 001     12455664   2356789999999999998773333332    2444555555


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      .+...+.    .++.++.+++.+||+.+|++||++.++...|.
T Consensus       211 ~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         211 YRMSCPQ----KCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            5443333    68899999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.65  E-value=3.6e-16  Score=99.07  Aligned_cols=109  Identities=28%  Similarity=0.481  Sum_probs=76.4

Q ss_pred             eeecCCCCCCHHHHHHHH--h-cC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVESV--R-KG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~-~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      .+||+|||+++.......  . .+   ..+.+|+.   ..++.++||||||+++|++.. +..|...   .+....+..+
T Consensus       145 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~  224 (270)
T cd05056         145 CVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG  224 (270)
T ss_pred             CeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Confidence            489999998853211111  1 11   12446664   235778999999999999765 4444321   2445566666


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+...|.    .++.++.+++.+||..+|++||++.+++..|+.+.
T Consensus       225 ~~~~~~~----~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         225 ERLPMPP----NCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             CcCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            6554443    68899999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.65  E-value=3.9e-16  Score=98.87  Aligned_cols=108  Identities=19%  Similarity=0.408  Sum_probs=74.9

Q ss_pred             eeecCCCCCCHHHHH-----HHH--hcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHH
Q psy12612          2 RVELSDLRILRDEIV-----ESV--RKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~~~--~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~   64 (116)
                      ++||+|||++.....     ...  ..+   ..+..|+.   ..++.++||||||+++||+.. +..|...   .++...
T Consensus       144 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~  223 (269)
T cd05065         144 VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINA  223 (269)
T ss_pred             cEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence            589999998753110     000  011   13456664   345778999999999999765 5555432   245555


Q ss_pred             HhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         65 VRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        65 l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      +....+...+.    .++..+.+++.+||..+|.+||++.+|...|+.+
T Consensus       224 i~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         224 IEQDYRLPPPM----DCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHcCCcCCCcc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            55554433333    6888999999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.65  E-value=6.6e-16  Score=98.33  Aligned_cols=110  Identities=23%  Similarity=0.402  Sum_probs=77.3

Q ss_pred             eeecCCCCCCHHHHH--H--HHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV--E--SVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~--~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++.-..  .  ....+   ..+.+|+.   ..++.++|+||||+++|++.+ +..|...   .++...+..
T Consensus       147 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~  226 (279)
T cd05057         147 HVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK  226 (279)
T ss_pred             eEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC
Confidence            589999998863210  0  00011   13455664   235778999999999999887 5555322   355556666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.....|.    .++.++.+++.+||..+|.+||++.++...|+.+.+
T Consensus       227 ~~~~~~~~----~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         227 GERLPQPP----ICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             CCCCCCCC----CCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            65444444    577889999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.65  E-value=3.8e-16  Score=98.83  Aligned_cols=103  Identities=21%  Similarity=0.282  Sum_probs=65.2

Q ss_pred             eecCCCCCCHHHHHHHHhcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCC-CCCCCChHHH--HHHHhcCCCCCCC
Q psy12612          3 VELSDLRILRDEIVESVRKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDP-SERPDFTTEI--VESVRKGEKCLRP   74 (116)
Q Consensus         3 vKi~Dfgls~~~~~~~~~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~-~~~p~~~~~~--~~~l~~~~~~~~p   74 (116)
                      +|++|||++..........+ ..+.+||.    ..++.++||||||+++|++.. +..|......  ......+......
T Consensus       151 ~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~  230 (262)
T cd05077         151 IKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQCMLVT  230 (262)
T ss_pred             eEeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCccCCC
Confidence            79999999853211111112 23567774    235778999999999999864 4444221111  1112222211111


Q ss_pred             CCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         75 SLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        75 ~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                           ..+.++.+||.+||+.+|.+||+|.+|+..+
T Consensus       231 -----~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         231 -----PSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             -----CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence                 2457899999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.65  E-value=3.8e-16  Score=98.53  Aligned_cols=107  Identities=24%  Similarity=0.417  Sum_probs=72.7

Q ss_pred             eeecCCCCCCHHHHHH--HHhcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE--SVRKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||++......  ....+    ..+..|+.   ..++.++|+||||+++|++.+ +..|...   .+....+..+
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~  219 (260)
T cd05069         140 VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG  219 (260)
T ss_pred             eEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            5899999998531100  00001    12445654   235778999999999999987 4444322   2444555555


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK  112 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~  112 (116)
                      .....|.    ..+..+.+++.+||+.+|++||++.+|...|+.
T Consensus       220 ~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         220 YRMPCPQ----GCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CCCCCCc----ccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            4333332    578899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.65  E-value=3.9e-16  Score=99.29  Aligned_cols=106  Identities=23%  Similarity=0.444  Sum_probs=72.1

Q ss_pred             eeecCCCCCCHHHHHH----HHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCCC-CCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE----SVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDPS-ERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~-~~p~~~---~~~~~~l~~   67 (116)
                      .+||+|||+++.....    ....+   ..+.+|+.   ..++.++|+||||+++|++... ..|...   .+....+..
T Consensus       157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~  236 (277)
T cd05062         157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVME  236 (277)
T ss_pred             CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            5899999998532100    00001   12556765   3357789999999999998874 444322   244444444


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      +.....+.    .++..+.+++.+||..+|++||++.+++..|+
T Consensus       237 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         237 GGLLDKPD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             CCcCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            43333333    68889999999999999999999999988775

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.65  E-value=5.3e-16  Score=97.38  Aligned_cols=106  Identities=23%  Similarity=0.453  Sum_probs=71.4

Q ss_pred             eeecCCCCCCHHHHHHH-Hh-c-----CCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES-VR-K-----GEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~-~-----g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      ++||+|||+++...... .. .     ...+.+|+.   ..++.++|+||||+++|++.....+.+.    ......+..
T Consensus       132 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~  211 (252)
T cd05084         132 VLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ  211 (252)
T ss_pred             cEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc
Confidence            58999999986311000 00 0     112456664   2357789999999999998763333332    234444544


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      +.+...|.    .++..+.+++.+||..+|++||++.++...|+
T Consensus       212 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         212 GVRLPCPE----LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             CCCCCCcc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            44433333    67889999999999999999999999988775

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.64  E-value=3.5e-16  Score=98.64  Aligned_cols=103  Identities=14%  Similarity=0.242  Sum_probs=68.0

Q ss_pred             eecCCCCCCHHHHHHHH-hcCCCCCCCCcC----cccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCCCCCC
Q psy12612          3 VELSDLRILRDEIVESV-RKGEKCLRPNLS----ELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEKCLRP   74 (116)
Q Consensus         3 vKi~Dfgls~~~~~~~~-~~g~~~~~p~~~----~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~~~~p   74 (116)
                      +|++|||++........ .....+.+|+..    .++.++|+||||+++|++..+..+.+..   .....+.. .+...|
T Consensus       147 ~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~  225 (258)
T cd05078         147 IKLSDPGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE-DRHQLP  225 (258)
T ss_pred             EEecccccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH-ccccCC
Confidence            79999998853221111 112245677742    2577899999999999998876554431   11111111 112222


Q ss_pred             CCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         75 SLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        75 ~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      .    ....++.+|+.+||+.+|++||++.+|+..|
T Consensus       226 ~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         226 A----PKWTELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             C----CCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            2    3557899999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.64  E-value=2.5e-16  Score=99.32  Aligned_cols=108  Identities=24%  Similarity=0.451  Sum_probs=75.1

Q ss_pred             eeecCCCCCCHHHHHH--HHhcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE--SVRKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      .+||+|||+++.....  ....+    ..+.+|+.   ..++.++|+||||+++|++.+ +..|...   .++...+..+
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  219 (260)
T cd05067         140 CCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG  219 (260)
T ss_pred             CEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC
Confidence            4899999998532100  00111    23456664   235678999999999999987 5544321   2455556666


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .+...+.    .++.++.+++.+||..+|++||++++|...|+.+
T Consensus       220 ~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  260 (260)
T cd05067         220 YRMPRPD----NCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF  260 (260)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence            5544443    6788999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.64  E-value=1.2e-15  Score=96.10  Aligned_cols=107  Identities=24%  Similarity=0.406  Sum_probs=73.6

Q ss_pred             eeecCCCCCCHHHH---HHHHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEI---VESVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~---~~~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      .+||+|||++..-.   .......   ..+.+|+.   ..++.++|+||+|+++|++.+ +..|...   ......+..+
T Consensus       141 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~  220 (261)
T cd05034         141 VCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG  220 (261)
T ss_pred             CEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            58999999875311   1111111   12445654   235778999999999999987 4444221   2455555555


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK  112 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~  112 (116)
                      .+...|.    .++.++.+++.+||..+|++||+++++...|+.
T Consensus       221 ~~~~~~~----~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         221 YRMPRPP----NCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            5444443    578899999999999999999999999988875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.64  E-value=1.3e-16  Score=102.58  Aligned_cols=109  Identities=10%  Similarity=0.094  Sum_probs=68.9

Q ss_pred             eeecCCCCCCHHHHHH-----------HHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHH
Q psy12612          2 RVELSDLRILRDEIVE-----------SVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIV   62 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----------~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~   62 (116)
                      ++||+|||+++.-...           ....|. .+.+|+.   ..++.++||||||+++|++..+..|.-.    ..+.
T Consensus       164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~  243 (294)
T PHA02882        164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI  243 (294)
T ss_pred             cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence            5899999998532100           001122 3445554   3468899999999999999888777422    1111


Q ss_pred             HHHhcC--CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         63 ESVRKG--EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        63 ~~l~~~--~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      ......  .+...+.+....++.++.+++..||..+|++||++.+|...+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        244 HAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            111100  001111111125788999999999999999999999998765

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.64  E-value=2.8e-16  Score=99.48  Aligned_cols=107  Identities=21%  Similarity=0.297  Sum_probs=71.5

Q ss_pred             eeecCCCCCCHHHHHHH---HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVES---VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||++.......   ...| ..+..|+.   ..++.++|+||||+++|++..+..|...   ......+..+...
T Consensus       152 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~  231 (269)
T cd08528         152 KVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE  231 (269)
T ss_pred             cEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC
Confidence            58999999885321110   1112 23455664   2357889999999999999988777433   1233333333321


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                        | .+...++.++.++|.+||..||++||++.++...+.
T Consensus       232 --~-~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         232 --P-LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             --c-CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence              1 122246788999999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.64  E-value=4.7e-16  Score=99.17  Aligned_cols=108  Identities=24%  Similarity=0.458  Sum_probs=71.0

Q ss_pred             eeecCCCCCCHHHHHH----HH-hcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh--H---------
Q psy12612          2 RVELSDLRILRDEIVE----SV-RKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT--T---------   59 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~-~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~--~---------   59 (116)
                      ++||+|||+++.-...    .. ..+   ..+.+|+.   ..++.++|+||||+++||+.++..+...  .         
T Consensus       146 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~  225 (284)
T cd05081         146 RVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGND  225 (284)
T ss_pred             eEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccc
Confidence            5899999998631100    00 011   12345664   2357789999999999998775443221  0         


Q ss_pred             --------HHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         60 --------EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        60 --------~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                              .+...+..+.+...+.    .++.++.+|+.+||..+|++|||+.+|...|+.+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         226 KQGQMIVYHLIELLKNNGRLPAPP----GCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             cccccchHHHHHHHhcCCcCCCCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence                    1122233333322222    6888999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.63  E-value=9e-16  Score=97.18  Aligned_cols=108  Identities=23%  Similarity=0.487  Sum_probs=75.7

Q ss_pred             eeecCCCCCCHHHHHH--HH---hcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE--SV---RKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~---~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||+++.-...  ..   ..+   ..+..|+.   ..++.++|+||||+++|++.. +..|...   .+....+.
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~  223 (267)
T cd05066         144 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIE  223 (267)
T ss_pred             eEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHh
Confidence            5899999998632110  00   111   12455664   245778999999999999665 5656432   24555566


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      ++.+...+.    .++..+.+++.+||+.+|.+||++.+++..|+.+
T Consensus       224 ~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         224 EGYRLPAPM----DCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             CCCcCCCCC----CCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            665443333    6888999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.63  E-value=8.1e-16  Score=97.53  Aligned_cols=108  Identities=20%  Similarity=0.325  Sum_probs=68.0

Q ss_pred             eeecCCCCCCHHHHH-HHHhc-----C-CCCCCCCcC----------cccCHHHHHHHHHHhcccCCCCCCCCh----HH
Q psy12612          2 RVELSDLRILRDEIV-ESVRK-----G-EKCLRPNLS----------ELTCEEEVTAIMKRCWNEDPSERPDFT----TE   60 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-~~~~~-----g-~~~~~p~~~----------~~~~~~dv~s~g~~~we~~~~~~p~~~----~~   60 (116)
                      ++||+|||++..... .....     + ..+.+|++.          .++.++||||||+++|++.....+++.    .+
T Consensus       137 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~  216 (268)
T cd05086         137 TVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE  216 (268)
T ss_pred             cEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            589999998753111 11111     1 234566642          235689999999999998764443332    13


Q ss_pred             HHHHHhcC--CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         61 IVESVRKG--EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        61 ~~~~l~~~--~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      ....+..+  ....+|.+.. ..+..+.+++..|| .+|++||++++|+..|.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         217 VLNHVIKDQQVKLFKPQLEL-PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             HHHHHHhhcccccCCCccCC-CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            33333222  2233444432 46788999999999 67999999999988764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.63  E-value=3e-16  Score=99.05  Aligned_cols=110  Identities=19%  Similarity=0.328  Sum_probs=75.2

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~~~~l~~~   68 (116)
                      ++||+|||+++.-....    ...+ ..+.+|+.   ..++.++|+||||+++|++..+..|...     .++...+..+
T Consensus       144 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  223 (267)
T cd08224         144 VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC  223 (267)
T ss_pred             cEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcC
Confidence            57999999875311100    0011 12445664   2357789999999999999888777532     1233444444


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ..   +.++....+.++.+++.+||..+|++||++.+|+..|+.+.
T Consensus       224 ~~---~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         224 DY---PPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             CC---CCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            33   22222257788999999999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.63  E-value=8.2e-16  Score=99.17  Aligned_cols=108  Identities=26%  Similarity=0.432  Sum_probs=73.1

Q ss_pred             eeecCCCCCCHHHHHH--HHhc-----CCCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE--SVRK-----GEKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~-----g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~----~~~~~~l~   66 (116)
                      .+||+|||+++.-...  ....     ...+.+|+.   ..++.++||||+|+++|++.+ +..|...    ......+.
T Consensus       179 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~  258 (302)
T cd05055         179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK  258 (302)
T ss_pred             eEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH
Confidence            5799999998632110  0001     112456664   235778999999999999876 4444321    13334444


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .+.+...+.    ..+.++.+++.+||..+|++||++.+++..|+++
T Consensus       259 ~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         259 EGYRMAQPE----HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             cCCcCCCCC----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            454433332    4678899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.63  E-value=6.8e-16  Score=97.04  Aligned_cols=104  Identities=17%  Similarity=0.240  Sum_probs=72.1

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++......    ...| ..+.+|+.   ..++.++|+||||+++|++..+..|...   ......+..+..
T Consensus       138 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~  217 (255)
T cd08219         138 KVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSY  217 (255)
T ss_pred             cEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCC
Confidence            58999999875321100    0112 23456664   2356789999999999999988887543   234445555554


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAA  109 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~  109 (116)
                      ...|.    .++..+.+++.+||..+|++||++.+|+..
T Consensus       218 ~~~~~----~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         218 KPLPS----HYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CCCCc----ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            33333    577889999999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.63  E-value=3.7e-16  Score=99.66  Aligned_cols=109  Identities=19%  Similarity=0.386  Sum_probs=71.2

Q ss_pred             eeecCCCCCCHHHHH--H--HHhc-C---CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh--HH--------
Q psy12612          2 RVELSDLRILRDEIV--E--SVRK-G---EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT--TE--------   60 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~--~~~~-g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~--~~--------   60 (116)
                      .+||+|||+++.-..  .  .... +   ..+.+|+.   ..++.++||||||+++|++.++..|...  ..        
T Consensus       145 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~  224 (283)
T cd05080         145 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPK  224 (283)
T ss_pred             cEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccc
Confidence            489999999863110  0  0100 1   11345654   2357789999999999999887666321  00        


Q ss_pred             --------HHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         61 --------IVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        61 --------~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                              +...+..+.....|.    .++.++.+++.+||+.+|++||++++|...|+.+.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         225 QGQMTVVRLIELLERGMRLPCPK----NCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             ccccchhhhhhhhhcCCCCCCCC----CCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence                    111111222211122    67889999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.62  E-value=9.3e-16  Score=97.56  Aligned_cols=108  Identities=24%  Similarity=0.466  Sum_probs=73.2

Q ss_pred             eeecCCCCCCHHHHHH----HHh----cCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH-----------
Q psy12612          2 RVELSDLRILRDEIVE----SVR----KGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT-----------   59 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~----~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~-----------   59 (116)
                      ++||+|||++......    ...    ....+..|+.   ..++.++|+||||+++|++.++..|....           
T Consensus       147 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~  226 (284)
T cd05038         147 LVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIA  226 (284)
T ss_pred             CEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccc
Confidence            5899999998642200    000    0112345553   23567899999999999998877764320           


Q ss_pred             -------HHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         60 -------EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        60 -------~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                             .+...+..+.+...+.    .++.++.+++.+||..+|.+||++.+|...|+.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         227 QGQMIVTRLLELLKEGERLPRPP----SCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             cccccHHHHHHHHHcCCcCCCCc----cCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence                   1222333333332232    6788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.62  E-value=2.3e-16  Score=101.80  Aligned_cols=104  Identities=15%  Similarity=0.248  Sum_probs=69.5

Q ss_pred             eeecCCCCCCHHHHHHH-HhcCCCCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCChHH---HHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVES-VRKGEKCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFTTE---IVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g~~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~~~---~~~~l~~~~~~   71 (116)
                      .+||+|||++....... ......+.+|+.      ..++.++||||||+++|++.++..|.+...   ....+....  
T Consensus       153 ~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~--  230 (307)
T cd06607         153 TVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND--  230 (307)
T ss_pred             CEEEeecCcceecCCCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCC--
Confidence            58999999885321110 111123556764      235678999999999999999887765421   122222222  


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       .|.+....++.++.+++.+||..+|++||++.+|+.
T Consensus       231 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  266 (307)
T cd06607         231 -SPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK  266 (307)
T ss_pred             -CCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence             233333357788999999999999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.62  E-value=1.4e-15  Score=97.33  Aligned_cols=109  Identities=22%  Similarity=0.398  Sum_probs=74.3

Q ss_pred             eeecCCCCCCHHHHH----HHHhc---CCCCCCCCc---CcccCHHHHHHHHHHhcccCCC-CCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV----ESVRK---GEKCLRPNL---SELTCEEEVTAIMKRCWNEDPS-ERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~~~~~---g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~-~~p~~~---~~~~~~l~~   67 (116)
                      .+||+|||+++....    .....   ...+.+|+.   ..++.++|+||||+++|++... ..|...   .++...+..
T Consensus       157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~  236 (288)
T cd05061         157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD  236 (288)
T ss_pred             cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            589999999863211    00001   112455664   2357789999999999998874 334322   245555544


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.....+.    .++..+.+++..||+.+|++||++.+++..|++..
T Consensus       237 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         237 GGYLDQPD----NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             CCCCCCCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            44333333    57889999999999999999999999999888643

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.62  E-value=6.2e-16  Score=92.53  Aligned_cols=110  Identities=16%  Similarity=0.149  Sum_probs=69.8

Q ss_pred             eeecCCCCCCHHHHHHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH----HHHHHHhcCCCCCCC
Q psy12612          2 RVELSDLRILRDEIVESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT----EIVESVRKGEKCLRP   74 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~----~~~~~l~~~~~~~~p   74 (116)
                      ++|+  ||++..........+..+.+||.   ..++.++||||||+++||+..+..|....    .....+..+.....+
T Consensus        49 ~~~~--fG~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  126 (176)
T smart00750       49 LLKL--DGSVAFKTPEQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDP  126 (176)
T ss_pred             ceee--ccceEeeccccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCc
Confidence            4677  89875321111112235677886   34678999999999999999888775421    222333322221111


Q ss_pred             CC--CccchHH--HHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         75 SL--SELTCEE--EVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        75 ~~--~~~~~~~--~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .-  .......  ++.+++.+||..+|.+||++.+++..+..+
T Consensus       127 ~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      127 RDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             cccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            10  0112333  689999999999999999999998877654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0575|consensus

Probab=99.62  E-value=7.7e-16  Score=104.38  Aligned_cols=103  Identities=17%  Similarity=0.236  Sum_probs=74.4

Q ss_pred             CeeecCCCCCCHHHH-----HHHHhcCCCCCCCCcC---cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCC
Q psy12612          1 MRVELSDLRILRDEI-----VESVRKGEKCLRPNLS---ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGE   69 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~-----~~~~~~g~~~~~p~~~---~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~   69 (116)
                      |+|||+||||+..--     ...+++...+.+||+.   ..+..+||||+|+.+|-+.-++-|+-.   ++.+..++...
T Consensus       155 ~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~  234 (592)
T KOG0575|consen  155 MNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNE  234 (592)
T ss_pred             CcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcC
Confidence            689999999985211     1122222347788872   357789999999999998877654322   35666666544


Q ss_pred             CCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 KCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      . ..|.    ..+.+..+||.+-+..+|.+||+..+|+.
T Consensus       235 Y-~~P~----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  235 Y-SMPS----HLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             c-cccc----ccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            3 2343    67888999999999999999999999875

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.62  E-value=6.7e-16  Score=99.16  Aligned_cols=106  Identities=20%  Similarity=0.444  Sum_probs=67.3

Q ss_pred             eeecCCCCCCHHHHHHH--HhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC--CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVES--VRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP--SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~--~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||+++.-....  ...+     ..+..|+.   ..++.++|+||||+++||+..  +..|...   .++.....
T Consensus       168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~  247 (296)
T cd05095         168 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTG  247 (296)
T ss_pred             CEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHH
Confidence            58999999986311100  0011     12344542   346778999999999999875  3333221   12222221


Q ss_pred             c-----CCC--CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         67 K-----GEK--CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        67 ~-----~~~--~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      .     +..  ...|.    .++..+.++|.+||..+|++||++.+|+..|+
T Consensus       248 ~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         248 EFFRDQGRQVYLPKPA----LCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHhhccccccCCCCC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            1     111  12222    57889999999999999999999999998876

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.61  E-value=1.4e-15  Score=95.30  Aligned_cols=106  Identities=25%  Similarity=0.488  Sum_probs=72.0

Q ss_pred             eeecCCCCCCHHHH--HHHHhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEI--VESVRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~--~~~~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||++....  ......+     ..+.+|+.   ..++.++|+||||+++|++.+ +..|...   ......+..
T Consensus       131 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~  210 (251)
T cd05041         131 VLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIES  210 (251)
T ss_pred             cEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhc
Confidence            58999999986321  0011111     12455664   335778999999999999887 4444321   234444544


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      +.+...|.    .++.++.+++.+||..+|++||++.+++..|+
T Consensus       211 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         211 GYRMPAPQ----LCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             CCCCCCCc----cCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            44433343    67889999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.61  E-value=1.3e-15  Score=96.19  Aligned_cols=108  Identities=24%  Similarity=0.457  Sum_probs=74.4

Q ss_pred             eeecCCCCCCHHHHH--HHHhcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIV--ESVRKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      .+||+|||++..-..  .....+    ..+..|+.   ..++.++|+||||+++|++.+++++.|.    ..+...+..+
T Consensus       140 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~  219 (260)
T cd05073         140 VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG  219 (260)
T ss_pred             cEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC
Confidence            589999998752110  000111    12445664   2357789999999999999874444332    2455556666


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .....+.    ..+.++.+++.+||+.+|++||++.++...|+.+
T Consensus       220 ~~~~~~~----~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~  260 (260)
T cd05073         220 YRMPRPE----NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF  260 (260)
T ss_pred             CCCCCcc----cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence            5444443    6778899999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.61  E-value=2.3e-15  Score=95.86  Aligned_cols=102  Identities=18%  Similarity=0.278  Sum_probs=65.1

Q ss_pred             eecCCCCCCHHHHHHHHh-cCCCCCCCCc----CcccCHHHHHHHHHHhcccC-CCCCCCCh---HHHHHHHhcCCCCCC
Q psy12612          3 VELSDLRILRDEIVESVR-KGEKCLRPNL----SELTCEEEVTAIMKRCWNED-PSERPDFT---TEIVESVRKGEKCLR   73 (116)
Q Consensus         3 vKi~Dfgls~~~~~~~~~-~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~-~~~~p~~~---~~~~~~l~~~~~~~~   73 (116)
                      +|++|||++......... ....+.+|+.    ..++.++||||||+++|++. .+..|...   .+....+......  
T Consensus       163 ~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--  240 (274)
T cd05076         163 IKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKKHRL--  240 (274)
T ss_pred             eeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhccCC--
Confidence            799999987532211111 1223556663    23578899999999999974 44444321   1222222222211  


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      |.    ....++.++|.+||+.+|++||+|.+|+..|
T Consensus       241 ~~----~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         241 PE----PSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             CC----CCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            11    2446789999999999999999999998766

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.61  E-value=1.8e-15  Score=95.18  Aligned_cols=106  Identities=22%  Similarity=0.481  Sum_probs=71.1

Q ss_pred             eeecCCCCCCHHHHHH-----HH---hcCCCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE-----SV---RKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~---~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      .+||+|||+++.-...     ..   .....+.+|+.   ..++.++||||||+++|++.+ +..|...   .++...+.
T Consensus       135 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~  214 (257)
T cd05040         135 KVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKID  214 (257)
T ss_pred             EEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            5899999998632110     00   01113455664   235778999999999999987 5555321   23444443


Q ss_pred             c-CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         67 K-GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        67 ~-~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      . +.....|.    ..+.++.+++.+||..+|++||++.++...|.
T Consensus       215 ~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         215 KEGERLERPE----ACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             hcCCcCCCCc----cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            2 22233333    57889999999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.60  E-value=1.1e-15  Score=99.68  Aligned_cols=107  Identities=13%  Similarity=0.195  Sum_probs=68.2

Q ss_pred             eeecCCCCCCHHHHHHH---HhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcC----
Q psy12612          2 RVELSDLRILRDEIVES---VRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKG----   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~----   68 (116)
                      ++||+|||++.......   ......+.+||.   ..++.++||||||+++|++..+..|...   .++...+...    
T Consensus       142 ~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~  221 (331)
T cd06649         142 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDG  221 (331)
T ss_pred             cEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccccccc
Confidence            58999999986321111   111124567775   3468899999999999999887776432   1221111100    


Q ss_pred             ---------------------------------------CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 ---------------------------------------EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ---------------------------------------~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                                             ....+|..+....+.++.+++.+||..||++||++.+|+.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~  300 (331)
T cd06649         222 EEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMN  300 (331)
T ss_pred             ccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                                                   0001122222246788999999999999999999999865

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.60  E-value=1.1e-15  Score=95.90  Aligned_cols=105  Identities=26%  Similarity=0.478  Sum_probs=74.1

Q ss_pred             eeecCCCCCCHHHHHHH--H-hc----CCCCCCCCc---CcccCHHHHHHHHHHhcccCCC-CCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES--V-RK----GEKCLRPNL---SELTCEEEVTAIMKRCWNEDPS-ERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~-~~----g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~-~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||++.......  . ..    ...+.+||.   ..++.++|+||+|+++|++... ..|...   .++...+..
T Consensus       143 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~  222 (262)
T cd00192         143 VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK  222 (262)
T ss_pred             cEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            58999999986422110  0 01    112455664   2357789999999999998774 444321   356666666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      +.+...|.    .++.++.+++.+||..+|++||++.+++..|
T Consensus       223 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l  261 (262)
T cd00192         223 GYRLPKPE----YCPDELYELMLSCWQLDPEDRPTFSELVERL  261 (262)
T ss_pred             CCCCCCCc----cCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            66555554    6789999999999999999999999998876

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=2.2e-15  Score=94.97  Aligned_cols=104  Identities=14%  Similarity=0.170  Sum_probs=68.1

Q ss_pred             eeecCCCCCCHHHHH-HHHh------cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV-ESVR------KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-~~~~------~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~   67 (116)
                      ++||+|||++..... ....      .| ..+.+|+.   ..++.++||||+|+++|++..+..|....   ........
T Consensus       142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~  221 (263)
T cd06625         142 NVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT  221 (263)
T ss_pred             CEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhc
Confidence            589999999752110 0000      11 23556765   23567899999999999999988774331   11112211


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .  ...+.++. .++.++.+++.+||..+|.+||++.+++.
T Consensus       222 ~--~~~~~~~~-~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  259 (263)
T cd06625         222 Q--PTNPQLPS-HVSPDARNFLRRTFVENAKKRPSAEELLR  259 (263)
T ss_pred             c--CCCCCCCc-cCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence            1  11222222 67889999999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.60  E-value=2.2e-15  Score=94.55  Aligned_cols=103  Identities=16%  Similarity=0.215  Sum_probs=69.8

Q ss_pred             eeecCCCCCCHHHH----H-HHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEI----V-ESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~----~-~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++.-.    . ........+.+|+.   ..++.++|+||||+++|++..+..|...   .+....+..+..
T Consensus       139 ~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  218 (256)
T cd08529         139 NVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF  218 (256)
T ss_pred             CEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence            58999999875211    0 11111123456664   2356789999999999999988777432   233444444443


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...+.    ..+.++.+++.+||..+|++||++.+++.
T Consensus       219 ~~~~~----~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         219 PPVSQ----MYSQQLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             CCCcc----ccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence            32222    57788999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.60  E-value=1.8e-15  Score=96.64  Aligned_cols=108  Identities=21%  Similarity=0.409  Sum_probs=71.3

Q ss_pred             eeecCCCCCCHHHHHH----HH---hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------------
Q psy12612          2 RVELSDLRILRDEIVE----SV---RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------------   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~---~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------------   58 (116)
                      .+||+|||+++.-...    ..   ..+ ..+.+|+.   ..++.++||||||+++|++.++..|...            
T Consensus       147 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~  226 (284)
T cd05079         147 QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPT  226 (284)
T ss_pred             CEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccc
Confidence            5899999998631110    00   011 12455664   2357789999999999998765443221            


Q ss_pred             ------HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         59 ------TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        59 ------~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                            ......+..+.+...+.    .++..+.+|+.+||+.+|++||++.+++..++.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         227 HGQMTVTRLVRVLEEGKRLPRPP----NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             cccccHHHHHHHHHcCccCCCCC----CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence                  01222233333322232    6888999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.60  E-value=1.9e-15  Score=94.83  Aligned_cols=105  Identities=26%  Similarity=0.514  Sum_probs=73.2

Q ss_pred             eeecCCCCCCHHHHHH-HHhc----C-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE-SVRK----G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~~~----g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      ++||+|||++...... ....    + .++.+|+.   ..++.++|+|++|+++|++...+++.+.    .++...+..+
T Consensus       141 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~  220 (258)
T smart00219      141 VVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKG  220 (258)
T ss_pred             eEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC
Confidence            5899999998632211 0000    1 23445653   2357789999999999998875555442    2555666666


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      .....+.    .++.++.+++.+||..+|++||++.++...|
T Consensus       221 ~~~~~~~----~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      221 YRLPKPE----NCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             CCCCCCC----cCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            6544444    5888999999999999999999999987653

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.60  E-value=9.4e-16  Score=97.70  Aligned_cols=107  Identities=11%  Similarity=0.114  Sum_probs=67.5

Q ss_pred             eeecCCCCCCHHHHHHHH----hcC-CCCCCCCc--------CcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVESV----RKG-EKCLRPNL--------SELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g-~~~~~p~~--------~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~   68 (116)
                      .+||+|||++........    ..| ..+.+||.        ..++.++|+||||+++|++..+..|.........+...
T Consensus       159 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~  238 (282)
T cd06636         159 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLI  238 (282)
T ss_pred             CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhH
Confidence            589999999864211100    011 12445653        12566899999999999999887775431111111111


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .+...+.+....++.++.++|.+||..+|.+||++.+|+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         239 PRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             hhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            1111222222357889999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.60  E-value=1.5e-15  Score=96.98  Aligned_cols=107  Identities=17%  Similarity=0.240  Sum_probs=69.2

Q ss_pred             eeecCCCCCCHHHHHHH---HhcC-CCCCCCCc---C---cccCHHHHHHHHHHhcccCCCCCCCCh-HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES---VRKG-EKCLRPNL---S---ELTCEEEVTAIMKRCWNEDPSERPDFT-TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g-~~~~~p~~---~---~~~~~~dv~s~g~~~we~~~~~~p~~~-~~~~~~l~~~~~   70 (116)
                      .+||+|||+++.-....   ...| ..+.+|+.   .   .++.++|+||+|+++|++..+..|... ......+.....
T Consensus       146 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  225 (288)
T cd06616         146 NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVK  225 (288)
T ss_pred             cEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcC
Confidence            48999999986422110   1112 23456664   1   357789999999999999888777432 122233332222


Q ss_pred             CCCCCCCc---cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSE---LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~---~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...|.++.   ..++.++.+|+.+||..+|++||++.+|+.
T Consensus       226 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         226 GDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             CCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            12222221   147789999999999999999999999865

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.59  E-value=1e-15  Score=96.92  Aligned_cols=104  Identities=13%  Similarity=0.183  Sum_probs=66.5

Q ss_pred             eeecCCCCCCHHHHHH--H--HhcCC-CCCCCCcC--------cccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHH
Q psy12612          2 RVELSDLRILRDEIVE--S--VRKGE-KCLRPNLS--------ELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~--~~~g~-~~~~p~~~--------~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l   65 (116)
                      .+||+|||++......  .  ...|. .+.+|+..        .++.++|+||||+++|++..+..|....   .....+
T Consensus       149 ~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~  228 (272)
T cd06637         149 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI  228 (272)
T ss_pred             CEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH
Confidence            4899999998531100  0  00111 24556641        2567899999999999999988775421   111111


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ....   .+......++.++.+|+.+||..+|.+||++.+++.
T Consensus       229 ~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         229 PRNP---APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             hcCC---CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            1111   111111257788999999999999999999999864

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.59  E-value=3.9e-15  Score=93.58  Aligned_cols=103  Identities=17%  Similarity=0.273  Sum_probs=66.4

Q ss_pred             eeecCCCCCCHHHHHHHHhcC-CCCCCCCc---C--cccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESVRKG-EKCLRPNL---S--ELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g-~~~~~p~~---~--~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~~~   71 (116)
                      .+||+|||++..........+ ..+.+|+.   .  .++.++|+||||+++|++..+..+.+.    .+...........
T Consensus       146 ~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~  225 (259)
T cd05037         146 FIKLSDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHRL  225 (259)
T ss_pred             eEEeCCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCCCC
Confidence            589999999864221111112 23456664   1  357789999999999998775333332    1112222222212


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      ..|      ....+.+++.+||..+|++||++.+|+..|
T Consensus       226 ~~~------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         226 PMP------DCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             CCC------CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            222      237889999999999999999999998776

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.59  E-value=1.6e-15  Score=103.37  Aligned_cols=103  Identities=18%  Similarity=0.217  Sum_probs=72.7

Q ss_pred             eeecCCCCCCHHHHHH---HHh---cCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE---SVR---KGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~---~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~   68 (116)
                      .+||+|||+++.-...   ...   .|. .+.+||.   ..++.++||||||+++|++..+..|...   .++...+..+
T Consensus       207 ~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~  286 (478)
T PTZ00267        207 IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYG  286 (478)
T ss_pred             cEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            5899999998631100   000   122 3567764   3468899999999999999988877543   2455555555


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .....|.    .++.++.+++..||..+|++||++.+++.
T Consensus       287 ~~~~~~~----~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        287 KYDPFPC----PVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             CCCCCCc----cCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            4433332    57889999999999999999999998864

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.59  E-value=1.8e-15  Score=95.94  Aligned_cols=108  Identities=19%  Similarity=0.341  Sum_probs=66.5

Q ss_pred             eeecCCCCCCHHHHHHH--Hh-----cCCCCCCCCcC----------cccCHHHHHHHHHHhcccCC-CCCCCCh---HH
Q psy12612          2 RVELSDLRILRDEIVES--VR-----KGEKCLRPNLS----------ELTCEEEVTAIMKRCWNEDP-SERPDFT---TE   60 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~-----~g~~~~~p~~~----------~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~   60 (116)
                      ++||+|||++.......  ..     ....+.+||+.          .++.++|+||||+++|++.. +..|...   .+
T Consensus       138 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~  217 (269)
T cd05087         138 TVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ  217 (269)
T ss_pred             cEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH
Confidence            58999999985321110  00     01235567642          13568999999999999875 5444321   12


Q ss_pred             HHHHHhcCC--CCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         61 IVESVRKGE--KCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        61 ~~~~l~~~~--~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      .......+.  +...|.+.. ..+..+.++|..|| .+|++||++.+|...|+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         218 VLTYTVREQQLKLPKPRLKL-PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             HHHHHhhcccCCCCCCccCC-CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            222222221  122333221 46678899999999 58999999999998764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0578|consensus

Probab=99.59  E-value=4.4e-16  Score=104.79  Aligned_cols=104  Identities=15%  Similarity=0.193  Sum_probs=75.5

Q ss_pred             eeecCCCCCCHHHHHHH----HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~   70 (116)
                      +|||+|||++..-....    ...|. .+++||+   ..|..+.||||||+..||+.-++-|++.+   +.+..+.... 
T Consensus       407 ~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng-  485 (550)
T KOG0578|consen  407 SVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-  485 (550)
T ss_pred             cEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcC-
Confidence            58999999986422111    11233 4678886   46899999999999999999999888753   2333333322 


Q ss_pred             CCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        .|.+. ....+.++.+.+.+|+..|+++|++.++++.
T Consensus       486 --~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  486 --TPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             --CCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence              23332 1368899999999999999999999999865

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.59  E-value=2.3e-15  Score=99.01  Aligned_cols=103  Identities=13%  Similarity=0.122  Sum_probs=68.1

Q ss_pred             eeecCCCCCCHHHHHH----HHhcC-CCCCCCCcC-------c-ccCHHHHHHHHHHhcccCCCCCCCCh------HHHH
Q psy12612          2 RVELSDLRILRDEIVE----SVRKG-EKCLRPNLS-------E-LTCEEEVTAIMKRCWNEDPSERPDFT------TEIV   62 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g-~~~~~p~~~-------~-~~~~~dv~s~g~~~we~~~~~~p~~~------~~~~   62 (116)
                      ++||+|||++......    ....| ..+.+||..       . .+.++||||||+++|++..+..|+..      ..+.
T Consensus       206 ~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~  285 (353)
T PLN00034        206 NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLM  285 (353)
T ss_pred             CEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHH
Confidence            5899999998631100    00112 235667742       1 13479999999999999888777431      1222


Q ss_pred             HHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         63 ESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        63 ~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+........+.    .++.++.+||.+||..||++||++.+|+.
T Consensus       286 ~~~~~~~~~~~~~----~~~~~l~~li~~~l~~~P~~Rpt~~ell~  327 (353)
T PLN00034        286 CAICMSQPPEAPA----TASREFRHFISCCLQREPAKRWSAMQLLQ  327 (353)
T ss_pred             HHHhccCCCCCCC----ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            2333333222232    67889999999999999999999999875

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.59  E-value=1.6e-15  Score=97.23  Aligned_cols=110  Identities=17%  Similarity=0.341  Sum_probs=68.6

Q ss_pred             eeecCCCCCCHHHHHHH--HhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC--CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVES--VRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP--SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~--~~~p~~~---~~~~~~l~   66 (116)
                      .+||+|||+++......  ...+     ..+.+|+.   ..++.++||||||+++|++..  +..|...   .+++..+.
T Consensus       168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~  247 (296)
T cd05051         168 TIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAG  247 (296)
T ss_pred             ceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHH
Confidence            58999999986321100  0011     12456664   245778999999999999765  3333211   24444443


Q ss_pred             cCCCCC--CCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         67 KGEKCL--RPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        67 ~~~~~~--~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      ...+..  .+..+ ...++.++.+++.+||+.+|.+||++.+|+..|+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         248 HFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             hccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            321100  00000 1156789999999999999999999999988775

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.58  E-value=3.1e-15  Score=94.73  Aligned_cols=108  Identities=18%  Similarity=0.397  Sum_probs=67.7

Q ss_pred             eeecCCCCCCHHHHHHH--Hh-c----CCCCCCCCc----------CcccCHHHHHHHHHHhcccCCCCCCCCh----HH
Q psy12612          2 RVELSDLRILRDEIVES--VR-K----GEKCLRPNL----------SELTCEEEVTAIMKRCWNEDPSERPDFT----TE   60 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~-~----g~~~~~p~~----------~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~   60 (116)
                      ++||+|||+++......  .. .    ...+.+|+.          ..++.++||||||+++|++.....+.+.    .+
T Consensus       138 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~  217 (269)
T cd05042         138 SVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ  217 (269)
T ss_pred             cEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH
Confidence            58999999986421111  00 1    112455653          1246689999999999998874443332    12


Q ss_pred             HHHHHhcCCC--CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         61 IVESVRKGEK--CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        61 ~~~~l~~~~~--~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      ..........  ...|.++ ..++..+.+++..|| .+|++||++++|...|.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         218 VLKQVVREQDIKLPKPQLD-LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             HHHHHhhccCccCCCCccc-ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            3333222222  2233322 257788899999999 59999999999988763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0983|consensus

Probab=99.58  E-value=3.4e-15  Score=93.97  Aligned_cols=104  Identities=17%  Similarity=0.288  Sum_probs=74.7

Q ss_pred             eeecCCCCCCHHHHHHHH---hcC-CCCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVESV---RKG-EKCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g-~~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      ++|+||||+|-.-+....   ..| ..+++||-      +.|+..+||||||+++.|+.++..|.-.    .+++..+.+
T Consensus       230 niKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln  309 (391)
T KOG0983|consen  230 NIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN  309 (391)
T ss_pred             CEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh
Confidence            689999999853221111   112 23556653      5689999999999999999998888533    256666655


Q ss_pred             CCCCCCCCCCc-cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEKCLRPSLSE-LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~~-~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..   .|.++. ...++.+.++...|+..|+.+||...+++.
T Consensus       310 ~e---PP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  310 EE---PPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             cC---CCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            33   355543 247889999999999999999999988764

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.58  E-value=1.1e-15  Score=98.74  Aligned_cols=104  Identities=17%  Similarity=0.252  Sum_probs=68.8

Q ss_pred             eeecCCCCCCHHHHHHHHhcC-CCCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESVRKG-EKCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g-~~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~~   71 (116)
                      .+||+|||++..........+ ..+.+|+.      ..++.++||||||+++|++..+..|.+..   +....+..+.. 
T Consensus       153 ~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-  231 (308)
T cd06634         153 LVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-  231 (308)
T ss_pred             cEEECCcccceeecCcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC-
Confidence            589999998753211111111 23456663      12466899999999999998888775431   22333333332 


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        |.......+..+.++|.+||..+|.+||++.+++.
T Consensus       232 --~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~  266 (308)
T cd06634         232 --PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (308)
T ss_pred             --CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence              22222257788999999999999999999999875

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.57  E-value=8.1e-15  Score=92.49  Aligned_cols=107  Identities=15%  Similarity=0.226  Sum_probs=69.6

Q ss_pred             eeecCCCCCCHHHHHHHH--hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH-----HHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESV--RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT-----EIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~-----~~~~~l~~~~~   70 (116)
                      .+||+|||++..-.....  ..+ ..+..|+.   ..++.++|+||||+++|++..+..|....     .....+.....
T Consensus       139 ~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  218 (265)
T cd06605         139 QIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN  218 (265)
T ss_pred             CEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc
Confidence            589999999864321111  112 23455664   24577899999999999998877775321     12222222111


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...|.++...++.++.++|.+||..+|++||++.+++.
T Consensus       219 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         219 EPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             CCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            12333333237788999999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.57  E-value=4.3e-15  Score=97.11  Aligned_cols=106  Identities=17%  Similarity=0.270  Sum_probs=66.8

Q ss_pred             eeecCCCCCCHHHHHHHHhc---C-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc---C
Q psy12612          2 RVELSDLRILRDEIVESVRK---G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK---G   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~---g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~---~   68 (116)
                      .+||+|||++..-. .....   | ..+.+||.   ..++.++|+||||+++|++..+..|...   .++...+..   +
T Consensus       142 ~~kL~Dfg~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  220 (333)
T cd06650         142 EIKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEG  220 (333)
T ss_pred             CEEEeeCCcchhhh-hhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccC
Confidence            48999999986421 11111   2 24567775   2367889999999999998887776432   111111100   0


Q ss_pred             --------------------------------------CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 --------------------------------------EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 --------------------------------------~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                                            .....|.++....+.++.+|+.+||..||++||++.+++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~  298 (333)
T cd06650         221 DPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV  298 (333)
T ss_pred             CccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence                                                  0001111221235678899999999999999999999954

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.57  E-value=4.4e-15  Score=95.34  Aligned_cols=109  Identities=20%  Similarity=0.381  Sum_probs=67.8

Q ss_pred             eeecCCCCCCHHHHHHH--HhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC--CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVES--VRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP--SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~--~~~p~~~---~~~~~~l~   66 (116)
                      .+||+|||++.......  ...+     ..+.+|+.   ..++.++|+||||+++|++..  +..|...   .++...+.
T Consensus       167 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~  246 (295)
T cd05097         167 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTG  246 (295)
T ss_pred             cEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHH
Confidence            58999999986321100  0011     12455664   346789999999999999865  2333211   23332221


Q ss_pred             c----CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         67 K----GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        67 ~----~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      .    .........+ ..++..+.+|+.+||..+|++||++.+|...|+
T Consensus       247 ~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         247 EFFRNQGRQIYLSQT-PLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HhhhhccccccCCCC-CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            1    1111111111 157789999999999999999999999988775

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.57  E-value=7e-15  Score=92.43  Aligned_cols=103  Identities=14%  Similarity=0.200  Sum_probs=70.3

Q ss_pred             eeecCCCCCCHHHHH----HHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIV----ESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .+||+|||++.....    .....| ..+.+|+.   ..++.++|+||||+++|++.++..|...   .+....+..+..
T Consensus       139 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~  218 (256)
T cd08218         139 TIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY  218 (256)
T ss_pred             CEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC
Confidence            489999998852110    001112 12445654   2346789999999999999988777543   233444444543


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...|.    ..+.++.+++.+||+.+|++||++.+++.
T Consensus       219 ~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         219 PPVSS----HYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             CCCcc----cCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            33333    67889999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.55  E-value=5.6e-15  Score=92.85  Aligned_cols=104  Identities=16%  Similarity=0.167  Sum_probs=69.8

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES-----VRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .+||+|||++.......     ......+.+|+.   ..++.++|+||||+++|++..+..|...   .+....+..+..
T Consensus       139 ~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~  218 (256)
T cd08221         139 LIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNY  218 (256)
T ss_pred             CEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC
Confidence            58999999875321111     111123445654   2346789999999999999887766432   233444444443


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAA  109 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~  109 (116)
                      ...+.    .++.++.+++.+||..+|.+||++.+++..
T Consensus       219 ~~~~~----~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         219 TPVVS----VYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             CCCcc----ccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            22222    578899999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.55  E-value=8.3e-15  Score=93.42  Aligned_cols=103  Identities=16%  Similarity=0.221  Sum_probs=67.7

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcCCCCCCCCcC--------cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVES-----VRKGEKCLRPNLS--------ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g~~~~~p~~~--------~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||++.......     ......+.+|+..        .++.++|+||||+++|++..+..|...   .+....+
T Consensus       141 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~  220 (282)
T cd06643         141 DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKI  220 (282)
T ss_pred             CEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHH
Confidence            58999999985321100     0111235566641        245689999999999999888776432   1222233


Q ss_pred             hcCCC--CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEK--CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~--~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+..  ...|.    .++.++.+++.+||+.+|.+||++.+++.
T Consensus       221 ~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         221 AKSEPPTLAQPS----RWSSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             hhcCCCCCCCcc----ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            32222  11222    57789999999999999999999998864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.55  E-value=7.6e-15  Score=94.06  Aligned_cols=104  Identities=15%  Similarity=0.247  Sum_probs=67.4

Q ss_pred             eeecCCCCCCHHHHHHHH-----hcCCCCCCCCcC--------cccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHH
Q psy12612          2 RVELSDLRILRDEIVESV-----RKGEKCLRPNLS--------ELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-----~~g~~~~~p~~~--------~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l   65 (116)
                      ++||+|||++........     .....+.+||..        .++.++|+||||+++|++..+..|....   +....+
T Consensus       148 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~  227 (292)
T cd06644         148 DIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI  227 (292)
T ss_pred             CEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence            489999998753211100     011234566641        2467899999999999999887775431   222222


Q ss_pred             hcCCCCCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.   .|... +..++.++.+++.+||..+|++||++.+++.
T Consensus       228 ~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         228 AKSE---PPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             hcCC---CccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            2222   22111 1256788999999999999999999999865

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.55  E-value=7e-15  Score=93.83  Aligned_cols=108  Identities=15%  Similarity=0.201  Sum_probs=67.6

Q ss_pred             eeecCCCCCCHHHHHH----HHhcC-CCCCCCCcC--------cccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKG-EKCLRPNLS--------ELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g-~~~~~p~~~--------~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~   68 (116)
                      .+||+|||+++.....    ....| ..+.+|+..        .++.++|+||+|+++|++..+..|.........+...
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~  241 (286)
T cd06638         162 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKI  241 (286)
T ss_pred             CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhc
Confidence            4899999987532110    01112 235567641        2567899999999999999888775431111111111


Q ss_pred             CCCCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy12612         69 EKCLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKAA  109 (116)
Q Consensus        69 ~~~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~  109 (116)
                      .....+.+. +..++.++.++|.+||+.+|++||++.+|+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         242 PRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             cccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            111111111 12467789999999999999999999998753

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=3.8e-14  Score=89.24  Aligned_cols=106  Identities=17%  Similarity=0.202  Sum_probs=67.4

Q ss_pred             eeecCCCCCCHHHHHHH-Hh---cC-CCCCCCCc---C---cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES-VR---KG-EKCLRPNL---S---ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~---~g-~~~~~p~~---~---~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~   67 (116)
                      .+||+|||++....... ..   .+ ..+.+|+.   .   .++.++|+||||+++|++..+..|...   .+....+..
T Consensus       139 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~  218 (262)
T cd06613         139 DVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISK  218 (262)
T ss_pred             CEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            58999999986421111 00   11 13456664   2   456789999999999999988877543   111222222


Q ss_pred             C-CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 G-EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~-~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      . ........ ....+.++.+++.+||..+|.+||++++|+.
T Consensus       219 ~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         219 SNFPPPKLKD-KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             ccCCCccccc-hhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            1 11111110 1145678999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.54  E-value=6.3e-15  Score=94.11  Aligned_cols=108  Identities=19%  Similarity=0.246  Sum_probs=69.6

Q ss_pred             eeecCCCCCCHHHHHHHH--hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH-----------HHHHH
Q psy12612          2 RVELSDLRILRDEIVESV--RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT-----------EIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~-----------~~~~~   64 (116)
                      ++||+|||++........  ..| ..+.+|+.   ..++.++|+||||+++|++..+..|....           .+...
T Consensus       142 ~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~  221 (284)
T cd06620         142 QIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDL  221 (284)
T ss_pred             cEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHH
Confidence            589999999863211110  011 23455664   23567899999999999998877764320           11222


Q ss_pred             HhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy12612         65 VRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAA  109 (116)
Q Consensus        65 l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~  109 (116)
                      +........+.++...++.++.+|+.+||..+|++||++.++...
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~  266 (284)
T cd06620         222 LQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM  266 (284)
T ss_pred             HHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            222222223333333477889999999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.54  E-value=2.3e-14  Score=91.16  Aligned_cols=103  Identities=17%  Similarity=0.264  Sum_probs=68.0

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .+||+|||++..-....    ...| ..+.+|+.   ..++.++|+||||+++|++.++..|...   ......+..+. 
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-  217 (277)
T cd06642         139 DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS-  217 (277)
T ss_pred             CEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCC-
Confidence            58999999885321111    1112 12455654   2357789999999999999888776432   12222232232 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        .+.+. ..++.++.+++.+||..+|++||++.+++.
T Consensus       218 --~~~~~-~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         218 --PPTLE-GQYSKPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             --CCCCC-cccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence              22221 257788999999999999999999999976

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.54  E-value=1e-14  Score=92.81  Aligned_cols=103  Identities=18%  Similarity=0.321  Sum_probs=68.5

Q ss_pred             eeecCCCCCCHHHHHHHHh----cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESVR----KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~----~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++.........    .+ ..+.+||.   ..++.++|+||||+++|++.++..|...   ......+..+. 
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-  217 (277)
T cd06640         139 DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN-  217 (277)
T ss_pred             CEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC-
Confidence            5899999998532111110    11 12456664   2357789999999999999888777532   12222232232 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        .|.+.. .++.++.+++.+||..+|++||++.+++.
T Consensus       218 --~~~~~~-~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06640         218 --PPTLTG-EFSKPFKEFIDACLNKDPSFRPTAKELLK  252 (277)
T ss_pred             --CCCCch-hhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence              222222 57888999999999999999999999965

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.54  E-value=1.7e-14  Score=91.14  Aligned_cols=103  Identities=15%  Similarity=0.202  Sum_probs=68.0

Q ss_pred             eeecCCCCCCHHHHHHHHh----------cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHH
Q psy12612          2 RVELSDLRILRDEIVESVR----------KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~----------~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~   64 (116)
                      ++||+|||+++.-......          .| ..+.+|+.   ..++.++|+|++|+++|++..+..|....   .....
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~  223 (267)
T cd06628         144 GIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFK  223 (267)
T ss_pred             CEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHH
Confidence            5899999987532111000          01 12345553   23567899999999999999887775421   22223


Q ss_pred             HhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         65 VRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        65 l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +..+..+..|.    ..+.++.+++.+||..+|.+||++.+|+.
T Consensus       224 ~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         224 IGENASPEIPS----NISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             HhccCCCcCCc----ccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            33333222232    57889999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.54  E-value=1.4e-14  Score=90.94  Aligned_cols=103  Identities=17%  Similarity=0.203  Sum_probs=68.0

Q ss_pred             eeecCCCCCCHHHHHH----HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      .+||+|||++......    .......+.+|+.   ..++.++|+||||+++|++..+..|.-.   ......+..+...
T Consensus       140 ~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~  219 (256)
T cd08220         140 VVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA  219 (256)
T ss_pred             EEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC
Confidence            4799999988532110    0111123456664   2246789999999999999887666322   1233333333322


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.    .++.++.+++.+||..+|++||++.+++.
T Consensus       220 ~~~~----~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         220 PISD----RYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             CCCC----CcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            2222    57889999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.53  E-value=4.3e-15  Score=96.27  Aligned_cols=104  Identities=16%  Similarity=0.288  Sum_probs=68.2

Q ss_pred             eeecCCCCCCHHHHHHHHhcC-CCCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESVRKG-EKCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g-~~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~~   71 (116)
                      .+||+|||++..........| ..+.+|+.      ..++.++|+||||+++|++..+..|.+..   .....+....  
T Consensus       159 ~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~--  236 (313)
T cd06633         159 QVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND--  236 (313)
T ss_pred             CEEEeecCCCcccCCCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC--
Confidence            489999998753211000111 23456664      23577899999999999999888876541   2222222222  


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       .|.......+..+.+++.+||+.+|.+||++.+++.
T Consensus       237 -~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         237 -SPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             -CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence             222222246678999999999999999999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG1006|consensus

Probab=99.53  E-value=2e-14  Score=90.10  Aligned_cols=106  Identities=18%  Similarity=0.276  Sum_probs=73.6

Q ss_pred             eeecCCCCCCHHHH---HHHHhcC-CCCCCCCc-----CcccCHHHHHHHHHHhcccCCCCCCC--ChHHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEI---VESVRKG-EKCLRPNL-----SELTCEEEVTAIMKRCWNEDPSERPD--FTTEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~---~~~~~~g-~~~~~p~~-----~~~~~~~dv~s~g~~~we~~~~~~p~--~~~~~~~~l~~~~~   70 (116)
                      -|||||||++-.-+   ...+..| ..+++||-     .-|+..|||||+|++++|+.++..|.  ++ .+.+++..-..
T Consensus       206 ~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-svfeql~~Vv~  284 (361)
T KOG1006|consen  206 DVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-SVFEQLCQVVI  284 (361)
T ss_pred             CEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-HHHHHHHHHHc
Confidence            48999999986422   2333334 34677774     23789999999999999999999884  33 45554443222


Q ss_pred             CCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...|.+..    ......+...+..|.-.|-+.||.+.++..
T Consensus       285 gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  285 GDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             CCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            22333321    135577889999999999999999998753

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.53  E-value=8.9e-15  Score=91.82  Aligned_cols=104  Identities=16%  Similarity=0.240  Sum_probs=66.0

Q ss_pred             eeecCCCCCCHHHHHH----HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~   70 (116)
                      .+||+|||++......    ....+ ..+.+|+.   ..++.++||||||+++|++..+..|....   +....+.... 
T Consensus       137 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~-  215 (256)
T cd06612         137 QAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKP-  215 (256)
T ss_pred             cEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCC-
Confidence            4899999997632110    00111 23455664   23577899999999999998887774321   1111111111 


Q ss_pred             CCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        .+.+. ....+.++.+++.+||..+|++||++.+++.
T Consensus       216 --~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         216 --PPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             --CCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence              11111 1146678999999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.53  E-value=6.4e-15  Score=95.56  Aligned_cols=105  Identities=16%  Similarity=0.263  Sum_probs=69.7

Q ss_pred             eeecCCCCCCHHHHHHHHhcC-CCCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESVRKG-EKCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g-~~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~~   71 (116)
                      .+||+|||++..........| ..+.+|+.      ..++.++|+||||+++|++..+..|.+..   .....+..+.. 
T Consensus       163 ~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-  241 (317)
T cd06635         163 QVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-  241 (317)
T ss_pred             CEEEecCCCccccCCcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccC-
Confidence            489999998753111111112 23556664      23567899999999999999888775541   22333333322 


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAA  109 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~  109 (116)
                        +.......+..+.+++.+||..+|.+||++.+|+..
T Consensus       242 --~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  277 (317)
T cd06635         242 --PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH  277 (317)
T ss_pred             --CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence              111122577889999999999999999999999764

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.53  E-value=3e-14  Score=91.72  Aligned_cols=103  Identities=14%  Similarity=0.152  Sum_probs=67.9

Q ss_pred             eeecCCCCCCHHHHHHHH----hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESV----RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~   70 (116)
                      ++||+|||++..-.....    ..+ ..+.+|+.   ..++.++|+||||+++|++..+..|....   .....+.....
T Consensus       153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~  232 (296)
T cd06655         153 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT  232 (296)
T ss_pred             CEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC
Confidence            589999998763211100    011 13456764   23577899999999999999887775431   11122222211


Q ss_pred             --CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 --CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 --~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        ...|    ..++..+.++|.+||..+|.+||++.+|+.
T Consensus       233 ~~~~~~----~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         233 PELQNP----EKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             cccCCc----ccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence              1122    257788999999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.53  E-value=2e-14  Score=90.32  Aligned_cols=103  Identities=15%  Similarity=0.196  Sum_probs=68.9

Q ss_pred             eeecCCCCCCHHHHH-----HHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIV-----ESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++..-..     ........+.+||.   ..++.++|+||+|+++|++.++..|...   ......+..+..
T Consensus       140 ~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~  219 (257)
T cd08223         140 IIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL  219 (257)
T ss_pred             cEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC
Confidence            589999998752110     00011123456765   2356789999999999999888776432   133334444443


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...+.    ..+.++.+++.+||+.+|.+||++.+++.
T Consensus       220 ~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         220 PPMPK----DYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             CCCcc----ccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            22222    57789999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.53  E-value=2.3e-14  Score=90.18  Aligned_cols=103  Identities=16%  Similarity=0.192  Sum_probs=70.4

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES-----VRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++.......     ......+..|+.   ..++.++|+|+||+++|++..+..|...   .++...+..+..
T Consensus       148 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  227 (265)
T cd08217         148 NVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKF  227 (265)
T ss_pred             CEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCC
Confidence            58999999886321100     011123445664   2356789999999999998887766432   244455555543


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...|.    ..+.++.+++.+||..+|++||++.+|+.
T Consensus       228 ~~~~~----~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         228 RRIPY----RYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             CCCcc----ccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            32232    67789999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG0201|consensus

Probab=99.52  E-value=4.5e-15  Score=97.68  Aligned_cols=106  Identities=16%  Similarity=0.217  Sum_probs=71.7

Q ss_pred             eeecCCCCCCHHHHHHHHh----cCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIVESVR----KGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~----~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~   73 (116)
                      .||++|||.+-.-......    -|. -+++||+   ..|+.++||||||++.+|+..+.-|.....-+..+--.-+...
T Consensus       149 ~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~P  228 (467)
T KOG0201|consen  149 DVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAP  228 (467)
T ss_pred             cEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCC
Confidence            5899999987421111111    132 3678987   3589999999999999999988766443111111111111223


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      |.+.. .+.+.+.+.+..|+..+|+.||+..+++.
T Consensus       229 P~L~~-~~S~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  229 PRLDG-DFSPPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             Ccccc-ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            43333 68888999999999999999999999865

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.52  E-value=5.2e-15  Score=94.23  Aligned_cols=104  Identities=16%  Similarity=0.251  Sum_probs=68.4

Q ss_pred             eeecCCCCCCHHHHHHHH---hcC-CCCCCCCc-------CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVESV---RKG-EKCLRPNL-------SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g-~~~~~p~~-------~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||+++.-.....   ..| ..+.+|+.       ..++.++|+|+||+++|++..+..|...    .+....+.
T Consensus       142 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~  221 (283)
T cd06617         142 QVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV  221 (283)
T ss_pred             CEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH
Confidence            589999999863211110   111 23455663       1246789999999999999988777532    12222222


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .+.   .+.++...++.++.+++.+||..+|++||++.+|+.
T Consensus       222 ~~~---~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         222 EEP---SPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             hcC---CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            232   233332357889999999999999999999999875

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.52  E-value=1.6e-14  Score=92.20  Aligned_cols=106  Identities=16%  Similarity=0.281  Sum_probs=68.1

Q ss_pred             eeecCCCCCCHHHHHHHHh--cC-CCCCCCCcC---------cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVESVR--KG-EKCLRPNLS---------ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~--~g-~~~~~p~~~---------~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||++..-......  .+ ..+.+|+..         .++.++|+||||+++|++..+..|...   ......+.
T Consensus       141 ~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~  220 (286)
T cd06622         141 QVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLS  220 (286)
T ss_pred             CEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHH
Confidence            5899999998532111010  11 134456531         236789999999999999888777432   12222222


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .......+.++. .++.++.++|.+||..+|++||++.+++.
T Consensus       221 ~~~~~~~~~~~~-~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         221 AIVDGDPPTLPS-GYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             HHhhcCCCCCCc-ccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            211111222322 58899999999999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.52  E-value=1.1e-14  Score=92.10  Aligned_cols=102  Identities=16%  Similarity=0.165  Sum_probs=64.6

Q ss_pred             eeecCCCCCCHHHHHH--------HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE--------SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--------~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||+++.-...        .......+.+|+.   ..++.++|+||+|+++|++..+..|...    ..+.....
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~  223 (266)
T cd06651         144 NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT  223 (266)
T ss_pred             CEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhc
Confidence            5899999998631100        0001113456664   2356789999999999999988776432    12222211


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..   ..|.++. .++..+..++ +||..+|++||++++|+.
T Consensus       224 ~~---~~~~~~~-~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         224 QP---TNPQLPS-HISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             CC---CCCCCch-hcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            12   2333322 4667788888 788899999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.52  E-value=1.7e-14  Score=91.32  Aligned_cols=106  Identities=15%  Similarity=0.228  Sum_probs=66.9

Q ss_pred             eeecCCCCCCHHHHH-----HHHhcCCCCCCCCcC-----cccCHHHHHHHHHHhcccCCCCCCCChH--HHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEIV-----ESVRKGEKCLRPNLS-----ELTCEEEVTAIMKRCWNEDPSERPDFTT--EIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~~~~~g~~~~~p~~~-----~~~~~~dv~s~g~~~we~~~~~~p~~~~--~~~~~l~~~~   69 (116)
                      ++||+|||++.....     ........+.+|+..     .++.++|+||||+++|++..+..|....  ........+.
T Consensus       147 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~  226 (268)
T cd06624         147 VVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGM  226 (268)
T ss_pred             eEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhh
Confidence            589999998753110     000111234566641     2567899999999999998877774320  0111111111


Q ss_pred             CCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 KCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ....|.++. .++.++.+++.+||..+|.+||++.+++.
T Consensus       227 ~~~~~~~~~-~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         227 FKIHPEIPE-SLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             hccCCCCCc-ccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            111222222 57889999999999999999999999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0198|consensus

Probab=99.52  E-value=1.3e-14  Score=93.59  Aligned_cols=107  Identities=16%  Similarity=0.278  Sum_probs=71.5

Q ss_pred             eeecCCCCCCHHHHH--HH-----HhcCC-CCCCCCcCc--ccC--HHHHHHHHHHhcccCCCCCCCCh-H-HHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV--ES-----VRKGE-KCLRPNLSE--LTC--EEEVTAIMKRCWNEDPSERPDFT-T-EIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~-----~~~g~-~~~~p~~~~--~~~--~~dv~s~g~~~we~~~~~~p~~~-~-~~~~~l~~   67 (116)
                      .+||+|||++.....  ..     ...|. .+++||+-.  ...  .+||||+|.++-|+.++..|... . .....+..
T Consensus       156 ~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~i  235 (313)
T KOG0198|consen  156 DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLI  235 (313)
T ss_pred             eEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHH
Confidence            589999998864321  00     01122 367788622  223  89999999999999999777432 0 11112222


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAA  109 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~  109 (116)
                      +.....|.+|. .++.+..+.+.+|...+|.+|||+.+++..
T Consensus       236 g~~~~~P~ip~-~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h  276 (313)
T KOG0198|consen  236 GREDSLPEIPD-SLSDEAKDFLRKCFKRDPEKRPTAEELLEH  276 (313)
T ss_pred             hccCCCCCCCc-ccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence            32223444444 688999999999999999999999998753

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.51  E-value=1.1e-14  Score=93.19  Aligned_cols=104  Identities=14%  Similarity=0.185  Sum_probs=66.8

Q ss_pred             eeecCCCCCCHHHHHHH----H-hcCCCCCCCCcC--------cccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHH
Q psy12612          2 RVELSDLRILRDEIVES----V-RKGEKCLRPNLS--------ELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~-~~g~~~~~p~~~--------~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l   65 (116)
                      ++||+|||++.......    . .....+.+|+..        .++.++|+||||+++|++..+..|....   +....+
T Consensus       166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~  245 (291)
T cd06639         166 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKI  245 (291)
T ss_pred             CEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHH
Confidence            58999999986321100    0 111235566641        1467899999999999999887665431   122223


Q ss_pred             hcCCCCCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+..   +.+. ....+..+.+++.+||..+|++||++.+|+.
T Consensus       246 ~~~~~---~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         246 PRNPP---PTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             hcCCC---CCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            22221   1111 1245678999999999999999999999864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.51  E-value=9.9e-15  Score=94.98  Aligned_cols=102  Identities=15%  Similarity=0.245  Sum_probs=70.6

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++......    ...| ..+.+||.   ..++.++||||+|+++|++..+..|...   ..+...+..+. 
T Consensus       133 ~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~-  211 (323)
T cd05571         133 HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE-  211 (323)
T ss_pred             CEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC-
Confidence            58999999986422110    0112 24667775   3467889999999999999998877643   23334443332 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      ...|.    ..+.++.+++.+||..||++||     +..+++.
T Consensus       212 ~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         212 IRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             CCCCC----CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            22232    5788999999999999999999     6777753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.51  E-value=1.8e-14  Score=92.66  Aligned_cols=103  Identities=15%  Similarity=0.165  Sum_probs=67.2

Q ss_pred             eeecCCCCCCHHHHHHHH----hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH----HHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEIVESV----RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT----EIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~----~~~~~l~~~~   69 (116)
                      .+||+|||++........    ..| ..+.+|+.   ..++.++|+||||+++|++..+..|+...    ........+.
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~  233 (296)
T cd06654         154 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT  233 (296)
T ss_pred             CEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCC
Confidence            589999999864211110    011 13455664   23567899999999999999888775431    1111111221


Q ss_pred             CC-CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 KC-LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~~-~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .. ..|    ...+..+.+++.+||..+|.+||++.+|+.
T Consensus       234 ~~~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         234 PELQNP----EKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             CCCCCc----cccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            11 111    256788999999999999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.51  E-value=1.7e-14  Score=91.57  Aligned_cols=104  Identities=19%  Similarity=0.253  Sum_probs=68.3

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .+||+|||++..-....    ...+ ..+.+|+.   ..++.++|||+||+++|++.++..|...   ......+..+. 
T Consensus       136 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-  214 (274)
T cd06609         136 DVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN-  214 (274)
T ss_pred             CEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC-
Confidence            58999999875321110    0011 12456664   2357889999999999999887766432   12333333333 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        .|.++...++.++.+++.+||..+|++||++++++.
T Consensus       215 --~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         215 --PPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             --CCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence              222222137788999999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.51  E-value=4.6e-14  Score=88.63  Aligned_cols=103  Identities=14%  Similarity=0.200  Sum_probs=67.4

Q ss_pred             eeecCCCCCCHHHHHH--H--HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE--S--VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~--~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .+||+|||++..-...  .  ...| ..+.+|+.   ..++.++|+||||+++|++..+..|...   .+....+..+..
T Consensus       140 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  219 (257)
T cd08225         140 VAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF  219 (257)
T ss_pred             eEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccC
Confidence            3699999987532100  0  0112 12445664   2357789999999999999888777432   122333333332


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...+.    ..+.++.+++.+||..+|++||++.+|+.
T Consensus       220 ~~~~~----~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         220 APISP----NFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             CCCCC----CCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            21111    46788999999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.50  E-value=1.8e-14  Score=91.54  Aligned_cols=107  Identities=15%  Similarity=0.189  Sum_probs=67.8

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCcC----cccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNLS----ELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~~----~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~   72 (116)
                      ++||+|||++.......    ...| ..+.+|+..    .++.++|+||||+++|++..+..|.........+.......
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~  218 (277)
T cd06917         139 NVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK  218 (277)
T ss_pred             CEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCC
Confidence            58999999874211000    0011 124456641    24678999999999999998877743211112111111122


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .|.++....+.++.+++.+||..+|++||++.++..
T Consensus       219 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         219 PPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             CCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            333333347789999999999999999999999865

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.50  E-value=2e-14  Score=103.78  Aligned_cols=101  Identities=16%  Similarity=0.226  Sum_probs=69.4

Q ss_pred             eecCCCCCCHHHHHHH---HhcC-CCCCCCCcC-----cccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCC
Q psy12612          3 VELSDLRILRDEIVES---VRKG-EKCLRPNLS-----ELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGE   69 (116)
Q Consensus         3 vKi~Dfgls~~~~~~~---~~~g-~~~~~p~~~-----~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~   69 (116)
                      +||+|||++.......   ...| ..+.+|++.     .++.++||||||+++|++..+..|+..    .+++..+..+.
T Consensus       181 VKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p  260 (1021)
T PTZ00266        181 AKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGP  260 (1021)
T ss_pred             eEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCC
Confidence            8999999986321110   1112 235677742     267899999999999999988877532    23444443332


Q ss_pred             CCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 KCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                           .++....+.++.+||..||..+|.+||++.+++.
T Consensus       261 -----~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        261 -----DLPIKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             -----CCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence                 1221246788999999999999999999999873

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.50  E-value=1.7e-14  Score=91.91  Aligned_cols=104  Identities=17%  Similarity=0.289  Sum_probs=67.9

Q ss_pred             eeecCCCCCCHHHHHHHH----hcC-CCCCCCCc--------CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVESV----RKG-EKCLRPNL--------SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g-~~~~~p~~--------~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||++........    ..+ ..+.+|+.        ..++.++|+||||+++|++..+..|...   .+....+
T Consensus       141 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~  220 (280)
T cd06611         141 DVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKI  220 (280)
T ss_pred             CEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHH
Confidence            589999998754211100    001 12445553        1246689999999999999888777543   1233333


Q ss_pred             hcCCCCCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+..   |.+. +..++.++.+++.+||..+|.+||++.+++.
T Consensus       221 ~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (280)
T cd06611         221 LKSEP---PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK  261 (280)
T ss_pred             hcCCC---CCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence            33332   2111 1257789999999999999999999999865

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.50  E-value=1.7e-14  Score=93.68  Aligned_cols=102  Identities=15%  Similarity=0.226  Sum_probs=69.8

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES-----VRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .+||+|||+++......     ......+.+||.   ..++.++|+||||+++|++..+..|...   .++...+.....
T Consensus       134 ~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~  213 (318)
T cd05570         134 HIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV  213 (318)
T ss_pred             cEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC
Confidence            58999999986421110     011123556765   3467889999999999999988777432   244444444332


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCH-----HHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF-----TTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~-----~~i~~  108 (116)
                       ..|.    .++.++.+|+.+||..||.+||+.     .++..
T Consensus       214 -~~~~----~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         214 -RYPR----WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             -CCCC----cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence             2232    578899999999999999999998     77653

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.50  E-value=1.5e-14  Score=92.97  Aligned_cols=107  Identities=14%  Similarity=0.137  Sum_probs=66.6

Q ss_pred             eeecCCCCCCHHHHHHHH----hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIVESV----RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~   73 (116)
                      .+||+|||++........    ..| ..+.+|+.   ..++.++|+||||+++|++..+..|.........+........
T Consensus       153 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~  232 (293)
T cd06647         153 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT  232 (293)
T ss_pred             CEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC
Confidence            589999998753211100    011 12456664   3357789999999999999888776543111111111111112


Q ss_pred             CCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         74 PSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        74 p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      |.+. ....+..+.+++.+||..+|.+||++.+++.
T Consensus       233 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  268 (293)
T cd06647         233 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  268 (293)
T ss_pred             CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            2221 1246678999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.50  E-value=5.3e-15  Score=94.63  Aligned_cols=102  Identities=16%  Similarity=0.172  Sum_probs=66.8

Q ss_pred             eeecCCCCCCHHHHH---HHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-------HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV---ESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-------TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~---~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-------~~~~~~l~~   67 (116)
                      .+||+|||++.....   .....| ..+.+||.   ..++.++||||||+++|++..+..|...       ..+...+..
T Consensus       140 ~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~  219 (285)
T cd05631         140 HIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE  219 (285)
T ss_pred             CEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc
Confidence            589999999853100   000112 24567775   3467889999999999999988777432       112222222


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPD-----FTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~-----~~~i~~  108 (116)
                      .. ...+.    ..+.++.+|+.+||..||++||+     +.++..
T Consensus       220 ~~-~~~~~----~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         220 DQ-EEYSE----KFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             cc-ccCCc----cCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            21 11121    57788999999999999999997     666654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.49  E-value=1.7e-14  Score=92.26  Aligned_cols=107  Identities=9%  Similarity=0.013  Sum_probs=65.5

Q ss_pred             eeecCCCCCCHHHHHHH----HhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||+++......    ......+.+||.   ..++.++||||||+++|++..+..|...   .+.+..+......
T Consensus       148 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~  227 (290)
T cd07862         148 QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL  227 (290)
T ss_pred             CEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCC
Confidence            58999999985321111    111123566764   3467889999999999999876655322   1222222211110


Q ss_pred             C------------------CCCCC----ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 L------------------RPSLS----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~------------------~p~~~----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .                  .+..+    ....+..+.+++.+|+..+|++||+..+++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         228 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             CChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            0                  00000    0135677889999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=6.6e-15  Score=95.35  Aligned_cols=99  Identities=13%  Similarity=0.212  Sum_probs=66.5

Q ss_pred             eeecCCCCCCHHHHHH----HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++.....    ....| ..+.+||.   ..++.++||||+|+++|++..+..|...   .++...+..+. 
T Consensus       131 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~-  209 (312)
T cd05585         131 HIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP-  209 (312)
T ss_pred             cEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC-
Confidence            5899999998632110    00112 23567775   2467889999999999999998887543   23333333322 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTT  105 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~  105 (116)
                      ...|.    .++.++.+++.+||..||.+||++..
T Consensus       210 ~~~~~----~~~~~~~~li~~~L~~dp~~R~~~~~  240 (312)
T cd05585         210 LRFPD----GFDRDAKDLLIGLLSRDPTRRLGYNG  240 (312)
T ss_pred             CCCCC----cCCHHHHHHHHHHcCCCHHHcCCCCC
Confidence            11222    57889999999999999999987543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.49  E-value=8e-14  Score=89.21  Aligned_cols=107  Identities=14%  Similarity=0.175  Sum_probs=68.0

Q ss_pred             eeecCCCCCCHHHHHHH---HhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh--------HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES---VRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT--------TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~--------~~~~~~l~~   67 (116)
                      .+||+|||++.......   ......+.+|+.   ..++.++|+|++|+++|++..+..|...        .+....+..
T Consensus       143 ~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  222 (287)
T cd06621         143 QVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN  222 (287)
T ss_pred             eEEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc
Confidence            48999999975322111   111123445664   3467789999999999999888777432        123333333


Q ss_pred             CCCCCCCCCCc--cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEKCLRPSLSE--LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~~--~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ......+..+.  ...++.+.+++.+||..+|++||++.+|+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         223 MPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             CCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            22211111111  135678999999999999999999999876

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.48  E-value=2.3e-14  Score=93.25  Aligned_cols=102  Identities=18%  Similarity=0.270  Sum_probs=69.6

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++......    ...| ..+.+||.   ..++.++||||||+++|++..+..|...   .+....+..+..
T Consensus       138 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~  217 (323)
T cd05584         138 HVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL  217 (323)
T ss_pred             CEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC
Confidence            58999999986321110    1112 24567775   2356789999999999999988877433   234444444432


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      . .|.    .++.++.+++.+||..+|++||     +..++..
T Consensus       218 ~-~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         218 N-LPP----YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             C-CCC----CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            2 232    5788899999999999999999     6666643

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.48  E-value=4.6e-14  Score=91.25  Aligned_cols=107  Identities=16%  Similarity=0.246  Sum_probs=66.1

Q ss_pred             eeecCCCCCCHHHHHHHH--hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcC----
Q psy12612          2 RVELSDLRILRDEIVESV--RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKG----   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~----   68 (116)
                      ++||+|||++..-.....  ..| ..+.+|+.   ..++.++|+||||+++|++..+..|....   .....+...    
T Consensus       138 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  217 (308)
T cd06615         138 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEG  217 (308)
T ss_pred             cEEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccc
Confidence            489999999863211100  011 23445664   23577899999999999988877664320   111111100    


Q ss_pred             -----------------------------CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 -----------------------------EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 -----------------------------~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                                   .....|.++....+.++.+++.+||..+|++||++.+|+.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  286 (308)
T cd06615         218 EAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTK  286 (308)
T ss_pred             cccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                                         0011222222236678999999999999999999999865

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.48  E-value=3.7e-14  Score=92.31  Aligned_cols=96  Identities=18%  Similarity=0.213  Sum_probs=66.1

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .+||+|||++......     .......+.+||.   ..++.++|+||||+++|++..+..|...   .++...+..+..
T Consensus       139 ~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~  218 (324)
T cd05589         139 FVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV  218 (324)
T ss_pred             cEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            5899999998632110     0111123567775   3467789999999999999988877432   244455544432


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCC
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPD  102 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~  102 (116)
                      . .|.    .++.++.+++.+||..||.+||+
T Consensus       219 ~-~p~----~~~~~~~~li~~~L~~dP~~R~~  245 (324)
T cd05589         219 R-YPR----FLSREAISIMRRLLRRNPERRLG  245 (324)
T ss_pred             C-CCC----CCCHHHHHHHHHHhhcCHhHcCC
Confidence            2 232    57888999999999999999994

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.48  E-value=6.5e-14  Score=88.28  Aligned_cols=103  Identities=15%  Similarity=0.173  Sum_probs=67.1

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~   70 (116)
                      .+||+|||++......     .......+.+|+.   ..++.++|+||||+++|++..+..|....   .....+..+..
T Consensus       143 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  222 (260)
T cd08222         143 LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPT  222 (260)
T ss_pred             CEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCC
Confidence            3799999987532100     0111112445553   23467899999999999988877664321   22333333332


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +..+.    .++.++.++|.+||..+|++||++.+++.
T Consensus       223 ~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         223 PSLPE----TYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             CCCcc----hhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            22222    67789999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.48  E-value=1.9e-14  Score=92.06  Aligned_cols=104  Identities=19%  Similarity=0.253  Sum_probs=68.6

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~   70 (116)
                      ++||+|||++.......    ...| ..+.+|+.   ..++.++|+||||+++|++..+..|.+..   +....+..+..
T Consensus       153 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~  232 (285)
T cd06648         153 RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLP  232 (285)
T ss_pred             cEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCC
Confidence            58999999875321100    0011 12445654   23577899999999999999988775431   23333433321


Q ss_pred             CCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                         +... ...++..+.+++.+||..+|++||++.+++.
T Consensus       233 ---~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         233 ---PKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             ---CCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence               1111 1137789999999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.48  E-value=1.7e-14  Score=91.27  Aligned_cols=107  Identities=15%  Similarity=0.184  Sum_probs=66.5

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCcC------cccCHHHHHHHHHHhcccCCCCCCCChHHHHH---HHhc
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNLS------ELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE---SVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~~------~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~---~l~~   67 (116)
                      ++||+|||++.......    ...| ..+.+|+..      .++.++|+||+|+++|++..+..|.+...-..   .+..
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~  223 (267)
T cd06646         144 DVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK  223 (267)
T ss_pred             CEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeec
Confidence            58999999986321110    0011 234556631      24668999999999999988877754311111   1111


Q ss_pred             CCCCCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy12612         68 GEKCLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKAA  109 (116)
Q Consensus        68 ~~~~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~  109 (116)
                      . ....+.+. ....+..+.+++.+||..+|++||++++|+..
T Consensus       224 ~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         224 S-NFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             C-CCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence            1 11112111 12456889999999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.48  E-value=5.8e-14  Score=88.49  Aligned_cols=105  Identities=18%  Similarity=0.212  Sum_probs=67.5

Q ss_pred             eeecCCCCCCHHHHHH---H------HhcCCCCCCCCcC------cccCHHHHHHHHHHhcccCCCCCCCCh----HHHH
Q psy12612          2 RVELSDLRILRDEIVE---S------VRKGEKCLRPNLS------ELTCEEEVTAIMKRCWNEDPSERPDFT----TEIV   62 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~------~~~g~~~~~p~~~------~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~   62 (116)
                      .+||+|||++......   .      ......+..|+..      .++.++|||+||+++|++..+..|...    ....
T Consensus       137 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~  216 (264)
T cd06626         137 VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIM  216 (264)
T ss_pred             CEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHH
Confidence            4899999987532110   0      0011234556641      146789999999999999988777432    1222


Q ss_pred             HHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         63 ESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        63 ~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+..+.....|..  ..++..+.+++.+||..+|.+||++.+|+.
T Consensus       217 ~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         217 FHVGAGHKPPIPDS--LQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHhcCCCCCCCcc--cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            33333332222221  135788999999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=3.1e-14  Score=90.06  Aligned_cols=104  Identities=13%  Similarity=0.182  Sum_probs=65.9

Q ss_pred             eeecCCCCCCHHHHH--HHH--hcC-CCCCCCCc--------CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHH
Q psy12612          2 RVELSDLRILRDEIV--ESV--RKG-EKCLRPNL--------SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~--~~g-~~~~~p~~--------~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l   65 (116)
                      ++||+|||++.....  ...  ..| ..+.+|+.        ..++.++||||||+++|++..+..|....   .....+
T Consensus       151 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~  230 (275)
T cd06608         151 EVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKI  230 (275)
T ss_pred             eEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHh
Confidence            589999998753110  111  011 12455653        12456799999999999999887775321   122222


Q ss_pred             hcCCCCCCCCCCc-cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPSLSE-LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~~~~-~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.   .+.+.. ...+.++.+++.+||..||++||++.+|+.
T Consensus       231 ~~~~---~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         231 PRNP---PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             hccC---CCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            2222   222211 236678999999999999999999999864

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.48  E-value=1.1e-13  Score=87.53  Aligned_cols=105  Identities=15%  Similarity=0.199  Sum_probs=67.2

Q ss_pred             eeecCCCCCCHHHHHHH-----------HhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHH
Q psy12612          2 RVELSDLRILRDEIVES-----------VRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----------~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~   64 (116)
                      .+||+|||++.......           ......+.+|+.   ..++.++|+||||+++|++..+..|...   ......
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~  219 (265)
T cd06631         140 IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY  219 (265)
T ss_pred             eEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH
Confidence            58999999886421100           000112445664   2356789999999999999988777532   111112


Q ss_pred             HhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         65 VRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        65 l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +..... ..|.++. ..+.++.+++++||..+|.+||++.+++.
T Consensus       220 ~~~~~~-~~~~~~~-~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         220 IGAHRG-LMPRLPD-SFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             hhhccC-CCCCCCC-CCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            222211 1222222 57889999999999999999999999864

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.48  E-value=2.6e-14  Score=92.79  Aligned_cols=101  Identities=14%  Similarity=0.263  Sum_probs=68.8

Q ss_pred             eeecCCCCCCHHHHH-----HHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIV-----ESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++....     ........+.+||.   ..++.++||||+|+++|++..+..|...   .++...+..+. 
T Consensus       134 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~-  212 (316)
T cd05620         134 HIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT-  212 (316)
T ss_pred             CEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-
Confidence            589999999863211     01111123567775   3467789999999999999988877543   24444444332 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHH-HHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFT-TLK  107 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~-~i~  107 (116)
                      ...|.    .++.++.+++.+||..||++|++.. ++.
T Consensus       213 ~~~~~----~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         213 PHYPR----WITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             CCCCC----CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            11222    5778899999999999999999974 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.48  E-value=2.5e-14  Score=92.90  Aligned_cols=100  Identities=10%  Similarity=0.206  Sum_probs=68.1

Q ss_pred             eeecCCCCCCHHHHH-----HHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIV-----ESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++....     ........+.+||.   ..++.++||||||+++|++..+..|...   .++...+.... 
T Consensus       134 ~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~-  212 (316)
T cd05592         134 HIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDR-  212 (316)
T ss_pred             CEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-
Confidence            589999999863211     11111123566775   3467889999999999999988777532   24444444322 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHH-HH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFT-TL  106 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~-~i  106 (116)
                      ...|.    .++.++.+++.+||..+|++||+.. ++
T Consensus       213 ~~~~~----~~~~~~~~ll~~~l~~~P~~R~~~~~~l  245 (316)
T cd05592         213 PHFPR----WISKEAKDCLSKLFERDPTKRLGVDGDI  245 (316)
T ss_pred             CCCCC----CCCHHHHHHHHHHccCCHHHcCCChHHH
Confidence            22232    5788899999999999999999875 44

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=4.2e-14  Score=90.80  Aligned_cols=102  Identities=16%  Similarity=0.136  Sum_probs=69.5

Q ss_pred             eeecCCCCCCHHHHHHH-HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIVES-VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~   73 (116)
                      ++||+|||++....... ...|. .+.+||.   ..++.++||||||+++|++..+..|...   .++...+..+.. ..
T Consensus       139 ~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-~~  217 (291)
T cd05612         139 HIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL-EF  217 (291)
T ss_pred             CEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc-CC
Confidence            58999999986421100 01122 3556764   2357889999999999999988877543   244455544432 22


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERPD-----FTTLKA  108 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~-----~~~i~~  108 (116)
                      |.    ..+..+.+|+.+||..||.+||+     ..++..
T Consensus       218 ~~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  253 (291)
T cd05612         218 PR----HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN  253 (291)
T ss_pred             Cc----cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence            22    46788999999999999999995     777653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.48  E-value=1.1e-13  Score=87.93  Aligned_cols=106  Identities=23%  Similarity=0.460  Sum_probs=69.4

Q ss_pred             eeecCCCCCCHHHHHHHH---hc---CCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVESV---RK---GEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~---g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      .+||+|||++........   ..   ...+..|+.   ..++.++||||||+++|++.....+.|.    ..+...+..+
T Consensus       155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~  234 (275)
T cd05046         155 EVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG  234 (275)
T ss_pred             cEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcC
Confidence            478999999753221110   00   012445653   2346789999999999998874333332    2444444443


Q ss_pred             CC-CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         69 EK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        69 ~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      .. ...+.    .++..+.+++.+||..+|++||++.+++..|.
T Consensus       235 ~~~~~~~~----~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         235 KLELPVPE----GCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CcCCCCCC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            32 11222    58889999999999999999999999988775

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.48  E-value=2.9e-14  Score=92.82  Aligned_cols=102  Identities=15%  Similarity=0.236  Sum_probs=69.3

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++......    ...| ..+.+||.   ..++.++||||||+++|++..+..|...   ......+..+..
T Consensus       133 ~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~  212 (323)
T cd05595         133 HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI  212 (323)
T ss_pred             CEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC
Confidence            58999999876421110    0112 24667875   3467889999999999999988887543   233333332221


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                       ..|.    .+++++.+++.+||..||++|+     +..+++.
T Consensus       213 -~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         213 -RFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             -CCCC----CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence             1222    5788999999999999999998     6777653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.48  E-value=4.5e-14  Score=92.05  Aligned_cols=107  Identities=16%  Similarity=0.169  Sum_probs=65.1

Q ss_pred             eeecCCCCCCHHHHHHH---H----hcC-CCCCCCCc-----CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHH--
Q psy12612          2 RVELSDLRILRDEIVES---V----RKG-EKCLRPNL-----SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVE--   63 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~----~~g-~~~~~p~~-----~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~--   63 (116)
                      ++||+|||+++......   .    ..| ..+.+||+     ..++.++||||||+++|++..+..|....   ....  
T Consensus       141 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~  220 (338)
T cd07859         141 KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLI  220 (338)
T ss_pred             cEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Confidence            58999999986421110   0    011 13456774     24677899999999999998876554210   0000  


Q ss_pred             -------------HHh--------cCCCCCCC-CCCc--cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         64 -------------SVR--------KGEKCLRP-SLSE--LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        64 -------------~l~--------~~~~~~~p-~~~~--~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                   .+.        ...+...| .+..  ...++++.+++.+||..+|++||++.+++.
T Consensus       221 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         221 TDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             HHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence                         000        00000011 0000  135677899999999999999999999874

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.47  E-value=1e-13  Score=89.04  Aligned_cols=104  Identities=17%  Similarity=0.266  Sum_probs=66.9

Q ss_pred             eeecCCCCCCHHHHHH---HHhcC-CCCCCCCc-------CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE---SVRKG-EKCLRPNL-------SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~g-~~~~~p~~-------~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||++..-...   ....+ ..+.+|+.       ..++.++|+||||+++|++..+..|...    .+.+..+.
T Consensus       153 ~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~  232 (296)
T cd06618         153 NVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKIL  232 (296)
T ss_pred             CEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHh
Confidence            5899999998531100   00011 12345553       1246789999999999999988777532    12233333


Q ss_pred             cCCCCCCCCCCc-cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEKCLRPSLSE-LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~~~~p~~~~-~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ....   +.++. ..++.++.+++.+||..+|.+||++.+++.
T Consensus       233 ~~~~---~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  272 (296)
T cd06618         233 QEEP---PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ  272 (296)
T ss_pred             cCCC---CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            3322   22221 146788999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.47  E-value=3.5e-14  Score=90.54  Aligned_cols=104  Identities=15%  Similarity=0.250  Sum_probs=67.1

Q ss_pred             eeecCCCCCCHHHHHHH--HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH----------HHHHHH
Q psy12612          2 RVELSDLRILRDEIVES--VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT----------EIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~----------~~~~~l   65 (116)
                      .+||+|||++..-....  ...| ..+.+|+.   ..++.++|+||||+++|++..+..|....          +....+
T Consensus       133 ~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  212 (279)
T cd06619         133 QVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCI  212 (279)
T ss_pred             CEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHH
Confidence            58999999986321110  0011 23456764   23577899999999999998877765320          111222


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ....   .+.++....+.++.+++.+||..+|.+||++.+++.
T Consensus       213 ~~~~---~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~  252 (279)
T cd06619         213 VDED---PPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMD  252 (279)
T ss_pred             hccC---CCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            1111   122222246678999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.47  E-value=3.3e-14  Score=92.34  Aligned_cols=101  Identities=12%  Similarity=0.244  Sum_probs=69.1

Q ss_pred             eeecCCCCCCHHHHHH----HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .+||+|||++......    ....| ..+.+||.   ..++.++||||+|+++|++..+..|...   .++...+..+. 
T Consensus       134 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~-  212 (316)
T cd05619         134 HIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN-  212 (316)
T ss_pred             CEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-
Confidence            5899999998532110    00112 23567775   3467899999999999999988877532   24444554433 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHH-HHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFT-TLK  107 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~-~i~  107 (116)
                      +..|.    .++.++.+++.+||..+|++||+.. ++.
T Consensus       213 ~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         213 PCYPR----WLTREAKDILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             CCCCc----cCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence            22222    5778899999999999999999996 553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.47  E-value=1.8e-13  Score=87.16  Aligned_cols=103  Identities=17%  Similarity=0.299  Sum_probs=68.3

Q ss_pred             eeecCCCCCCHHHHHHHH----hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESV----RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .+||+|||+++.......    ..+ ..+.+|+.   ..++.++|+||||+++|++..+..|...   ......+..+..
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  218 (277)
T cd06641         139 EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNP  218 (277)
T ss_pred             CEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCC
Confidence            589999998753111111    011 12455664   2356789999999999999888766432   123333333332


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                         +.++. .++.++.+++.+||..+|.+||++.+++.
T Consensus       219 ---~~~~~-~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  252 (277)
T cd06641         219 ---PTLEG-NYSKPLKEFVEACLNKEPSFRPTAKELLK  252 (277)
T ss_pred             ---CCCCc-ccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence               22221 57888999999999999999999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.47  E-value=4.6e-14  Score=88.95  Aligned_cols=104  Identities=13%  Similarity=0.128  Sum_probs=66.8

Q ss_pred             eeecCCCCCCHHHHHHHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCCC
Q psy12612          2 RVELSDLRILRDEIVESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLRP   74 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~p   74 (116)
                      .+||+|||+++.........+ ..+.+|+.   ..++.++|+||+|+++|++..+..|...   .++...+..+.....+
T Consensus       135 ~~~l~dfg~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  214 (260)
T cd05611         135 HLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPE  214 (260)
T ss_pred             cEEEeecccceeccccccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCC
Confidence            589999999864221111112 23455664   2257789999999999999887776432   2444444433322122


Q ss_pred             CCCccchHHHHHHHHHHhccCCCCCCCCHHHH
Q psy12612         75 SLSELTCEEEVTAIMKRCWNEDPSERPDFTTL  106 (116)
Q Consensus        75 ~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i  106 (116)
                      .+. ..++.++.+++.+||..+|++||+..++
T Consensus       215 ~~~-~~~~~~~~~~i~~~l~~~p~~R~~~~~~  245 (260)
T cd05611         215 EVK-EFCSPEAVDLINRLLCMDPAKRLGANGY  245 (260)
T ss_pred             ccc-ccCCHHHHHHHHHHccCCHHHccCCCcH
Confidence            211 1578899999999999999999966433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.47  E-value=4.5e-14  Score=92.18  Aligned_cols=107  Identities=12%  Similarity=0.138  Sum_probs=71.5

Q ss_pred             eeecCCCCCCHHHHHH--HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC-CC
Q psy12612          2 RVELSDLRILRDEIVE--SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK-CL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~-~~   72 (116)
                      ++||+|||++......  .......+.+||.   ..++.++||||||+++|++..+..|...   .+....+..... ..
T Consensus       139 ~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~  218 (333)
T cd05600         139 HIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQ  218 (333)
T ss_pred             CEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccccc
Confidence            5899999998642210  0111123567775   3467899999999999999988777432   234444443222 22


Q ss_pred             CCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .|...  ...++.++.+++.+||..+|.+||++.+++.
T Consensus       219 ~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~  256 (333)
T cd05600         219 RPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN  256 (333)
T ss_pred             CCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence            23211  0145788999999999999999999999875

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.47  E-value=6.7e-14  Score=88.27  Aligned_cols=107  Identities=12%  Similarity=0.170  Sum_probs=67.1

Q ss_pred             eeecCCCCCCHHHHHHHHh--------cC-CCCCCCCc---C-cccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHH
Q psy12612          2 RVELSDLRILRDEIVESVR--------KG-EKCLRPNL---S-ELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~--------~g-~~~~~p~~---~-~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l   65 (116)
                      .+||+|||++..-......        .| ..+.+|+.   . .++.++|+||||+++|++..+..|....   +.....
T Consensus       140 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~  219 (267)
T cd06610         140 SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLT  219 (267)
T ss_pred             CEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHH
Confidence            4799999988532211000        11 12345653   1 3577899999999999999988885431   222222


Q ss_pred             hcCCCCC-CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCL-RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~-~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ....... ........++.++.+++.+||..+|++||++.+|+.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         220 LQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             hcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            2221111 111011256788999999999999999999999864

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.46  E-value=1.3e-13  Score=87.26  Aligned_cols=106  Identities=15%  Similarity=0.205  Sum_probs=66.5

Q ss_pred             eeecCCCCCCHHHHHH----HHhcC-CCCCCCCcC------cccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE----SVRKG-EKCLRPNLS------ELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g-~~~~~p~~~------~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~   67 (116)
                      ++||+|||++......    ....| ..+.+|+..      .++.++|+||+|+++|++..+..|.+..   ........
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~  223 (267)
T cd06645         144 HVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTK  223 (267)
T ss_pred             CEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhc
Confidence            5899999987421110    00112 235567641      2567899999999999998887775431   11111111


Q ss_pred             CCCCCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEKCLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .. ...+.+. ...++..+.+++.+||..+|++||++.+|+.
T Consensus       224 ~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         224 SN-FQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             cC-CCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            11 1111111 1246678999999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0577|consensus

Probab=99.46  E-value=4.9e-14  Score=96.56  Aligned_cols=103  Identities=17%  Similarity=0.250  Sum_probs=77.0

Q ss_pred             eeecCCCCCCHHH--HHHHHhcCCCCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCChHH---HHHHHhcCCC
Q psy12612          2 RVELSDLRILRDE--IVESVRKGEKCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFTTE---IVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~--~~~~~~~g~~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~~~---~~~~l~~~~~   70 (116)
                      .||++|||-+.-.  ...++.+. .+++|++      ..|+-+.||||+|++|-|+...+-|.|+..   .+..+.... 
T Consensus       164 ~VKLaDFGSAsi~~PAnsFvGTP-ywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe-  241 (948)
T KOG0577|consen  164 LVKLADFGSASIMAPANSFVGTP-YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-  241 (948)
T ss_pred             eeeeccccchhhcCchhcccCCc-cccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC-
Confidence            5999999976421  12334222 3668886      458999999999999999988888877633   333444433 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        .|.++.+..+..+.+.+..|+..-|.+|||..+++.
T Consensus       242 --sPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  242 --SPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             --CCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence              566666678899999999999999999999988754

>KOG0596|consensus

Probab=99.46  E-value=2.2e-14  Score=97.06  Aligned_cols=105  Identities=21%  Similarity=0.381  Sum_probs=68.0

Q ss_pred             eeecCCCCCCHH------HHHHHHhcCC-CCCCCCcC--------------cccCHHHHHHHHHHhcccCCCCCCCChHH
Q psy12612          2 RVELSDLRILRD------EIVESVRKGE-KCLRPNLS--------------ELTCEEEVTAIMKRCWNEDPSERPDFTTE   60 (116)
Q Consensus         2 ~vKi~Dfgls~~------~~~~~~~~g~-~~~~p~~~--------------~~~~~~dv~s~g~~~we~~~~~~p~~~~~   60 (116)
                      ++||-|||+++.      .++...+.|. .++.||+.              .-+.+|||||+|.++|++..++-| |. +
T Consensus       497 ~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktP-f~-~  574 (677)
T KOG0596|consen  497 RLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTP-FG-Q  574 (677)
T ss_pred             eEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCc-hH-H
Confidence            789999999863      1222333343 46777751              134689999999999998777655 54 4


Q ss_pred             HHHHHhcCCCCCCCC----CCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         61 IVESVRKGEKCLRPS----LSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        61 ~~~~l~~~~~~~~p~----~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +...+.+-.+...|.    ++.-.-+.++..+|+.|++.||++||+..+++.
T Consensus       575 ~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  575 IINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             HHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            443333322322231    111112344889999999999999999998864

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.46  E-value=7.1e-14  Score=89.11  Aligned_cols=107  Identities=9%  Similarity=0.020  Sum_probs=65.6

Q ss_pred             eeecCCCCCCHHHHHH--HHh--c-CCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE--SVR--K-GEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~--~-g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      ++||+|||++..-...  ...  . ...+.+||.    ..++.++||||||+++|++.++..|.+.    .+....+...
T Consensus       137 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~  216 (284)
T cd07839         137 ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL  216 (284)
T ss_pred             cEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHH
Confidence            5899999988531100  000  0 123456764    2257889999999999999988877543    1111111100


Q ss_pred             C----------------CCCCCCCCc--------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 E----------------KCLRPSLSE--------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~----------------~~~~p~~~~--------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .                ....+..+.        ..++.++.+++.+||..||.+|||+.+++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         217 LGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             hCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            0                000011100        135678899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.45  E-value=2.7e-14  Score=91.07  Aligned_cols=102  Identities=16%  Similarity=0.159  Sum_probs=65.8

Q ss_pred             eeecCCCCCCHHHHHH---HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-------HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE---SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-------TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-------~~~~~~l~~   67 (116)
                      ++||+|||++..-...   ....| ..+.+||.   ..++.++|+||+|+++|++..+..|...       .++......
T Consensus       133 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~  212 (277)
T cd05607         133 NCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE  212 (277)
T ss_pred             CEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc
Confidence            5899999987521100   00112 24556764   3367889999999999999988777432       112222221


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                      ....    ......+.++.+|+.+||+.||.+||++.++.
T Consensus       213 ~~~~----~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~  248 (277)
T cd05607         213 DEVK----FEHQNFTEESKDICRLFLAKKPEDRLGSREKN  248 (277)
T ss_pred             cccc----cccccCCHHHHHHHHHHhccCHhhCCCCccch
Confidence            1111    11125778899999999999999999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0588|consensus

Probab=99.45  E-value=7e-14  Score=96.29  Aligned_cols=102  Identities=16%  Similarity=0.184  Sum_probs=79.5

Q ss_pred             eeecCCCCCCHHHHHHHHh---cCC-CCCCCCc---Ccc-cCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESVR---KGE-KCLRPNL---SEL-TCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~---~g~-~~~~p~~---~~~-~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+||||+..++...+-   .|. .+..||+   ..| .+++||||.|++++.+..+..|+-+   ..++..+++|.-
T Consensus       150 nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f  229 (786)
T KOG0588|consen  150 NIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF  229 (786)
T ss_pred             CEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc
Confidence            4899999999766543322   232 4677886   233 5789999999999999999999655   356777777764


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      . .|.    +++.+...|+.+....||..|=+..+|..
T Consensus       230 ~-MPs----~Is~eaQdLLr~ml~VDp~~RiT~~eI~k  262 (786)
T KOG0588|consen  230 E-MPS----NISSEAQDLLRRMLDVDPSTRITTEEILK  262 (786)
T ss_pred             c-CCC----cCCHHHHHHHHHHhccCccccccHHHHhh
Confidence            2 344    79999999999999999999999999975

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.45  E-value=9.4e-14  Score=89.62  Aligned_cols=85  Identities=13%  Similarity=0.067  Sum_probs=58.6

Q ss_pred             CCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCC
Q psy12612         25 CLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPS   98 (116)
Q Consensus        25 ~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~   98 (116)
                      +.+|+.   ..++.++|+||||+++|++..+..|...   .++......+.. ..|... ..++.++.+++.+||+.+|+
T Consensus       182 y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~li~~~l~~~P~  259 (305)
T cd05609         182 YIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI-EWPEGD-EALPADAQDLISRLLRQNPL  259 (305)
T ss_pred             ccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccc-CCCCcc-ccCCHHHHHHHHHHhccChh
Confidence            445664   2357789999999999999888877543   244444443332 122111 14778899999999999999


Q ss_pred             CCCCHHHHHHHHH
Q psy12612         99 ERPDFTTLKAAIR  111 (116)
Q Consensus        99 ~Rp~~~~i~~~l~  111 (116)
                      +||++.++.+.|+
T Consensus       260 ~R~~~~~~~~ll~  272 (305)
T cd05609         260 ERLGTGGAFEVKQ  272 (305)
T ss_pred             hccCccCHHHHHh
Confidence            9999765555444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.45  E-value=6.4e-14  Score=94.76  Aligned_cols=107  Identities=11%  Similarity=0.063  Sum_probs=66.1

Q ss_pred             eeecCCCCCCHHHHHHH--H-hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc-C
Q psy12612          2 RVELSDLRILRDEIVES--V-RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK-G   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~-~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~-~   68 (116)
                      .+||+|||+++.-....  . ..| ..+.+||.    ..|+.++||||+|+++|++..+..|...    ..+...+.. +
T Consensus       209 ~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~  288 (440)
T PTZ00036        209 TLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLG  288 (440)
T ss_pred             ceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence            58999999996321100  0 011 23567774    2478899999999999999887655432    112111110 0


Q ss_pred             C-------------C-CCCCCCC--------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 E-------------K-CLRPSLS--------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~-------------~-~~~p~~~--------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .             . ..-|.+.        +...+.++.+|+.+||..+|.+||+..+++.
T Consensus       289 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        289 TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence            0             0 0001110        0135678999999999999999999998863

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.45  E-value=5e-14  Score=91.63  Aligned_cols=97  Identities=15%  Similarity=0.202  Sum_probs=67.1

Q ss_pred             eeecCCCCCCHHHHHH----HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++.....    ....| ..+.+||.   ..++.++||||+|+++|++..+..|...   .++...+..+..
T Consensus       134 ~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~  213 (320)
T cd05590         134 HCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV  213 (320)
T ss_pred             cEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC
Confidence            5899999997642110    00112 23566765   2357789999999999999988877432   244555544432


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                       ..|.    .++.++.+++.+|+..||.+|++.
T Consensus       214 -~~~~----~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         214 -VYPT----WLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             -CCCC----CCCHHHHHHHHHHcccCHHHCCCC
Confidence             2232    578889999999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.45  E-value=5.9e-14  Score=90.17  Aligned_cols=105  Identities=15%  Similarity=0.153  Sum_probs=68.4

Q ss_pred             eeecCCCCCCHHHHHHHH----hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESV----RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++........    ..| ..+.+|+.   ..++.++|+||||+++|++..+..|...   .+....+.....
T Consensus       156 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~  235 (292)
T cd06658         156 RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLP  235 (292)
T ss_pred             CEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC
Confidence            589999999853211000    011 13456664   2357889999999999999988877543   122333333221


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...+.  ....+..+.+++..||..+|.+||++.+++.
T Consensus       236 ~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  271 (292)
T cd06658         236 PRVKD--SHKVSSVLRGFLDLMLVREPSQRATAQELLQ  271 (292)
T ss_pred             Ccccc--ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            11110  1145678899999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.45  E-value=5e-14  Score=91.94  Aligned_cols=102  Identities=13%  Similarity=0.239  Sum_probs=69.6

Q ss_pred             eeecCCCCCCHHHHHH--HH--hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE--SV--RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~--~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++.....  ..  ..| ..+.+||.   ..++.++||||+|+++|++..+..|...   .++...+..+..
T Consensus       133 ~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~  212 (328)
T cd05593         133 HIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI  212 (328)
T ss_pred             cEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCc
Confidence            5899999998642111  00  112 24567775   3467789999999999999998887543   233333333222


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                       ..|.    .++.++.+++.+|+..+|.+|+     +..+|+.
T Consensus       213 -~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  250 (328)
T cd05593         213 -KFPR----TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR  250 (328)
T ss_pred             -cCCC----CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence             1222    5788999999999999999997     7888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.45  E-value=7.7e-14  Score=89.85  Aligned_cols=105  Identities=16%  Similarity=0.226  Sum_probs=68.3

Q ss_pred             eeecCCCCCCHHHHHH----HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~   70 (116)
                      .+||+|||+++.-...    ....| ..+.+|+.   ..++.++|+||||+++|++..+..|.+..   +....+.....
T Consensus       155 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~  234 (297)
T cd06659         155 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP  234 (297)
T ss_pred             cEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCC
Confidence            5899999987531110    00111 23456664   23577899999999999999888775531   22233322211


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       .... .....+..+.+++.+||..+|.+||++.+++.
T Consensus       235 -~~~~-~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         235 -PKLK-NAHKISPVLRDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             -CCcc-ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence             1111 11246788999999999999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG1023|consensus

Probab=99.44  E-value=5.6e-14  Score=94.92  Aligned_cols=114  Identities=24%  Similarity=0.345  Sum_probs=80.7

Q ss_pred             eeecCCCCCCHHHH-------HHHHhcCCCCCCCCcC----------cccCHHHHHHHHHHhcccCCCCCCCCh------
Q psy12612          2 RVELSDLRILRDEI-------VESVRKGEKCLRPNLS----------ELTCEEEVTAIMKRCWNEDPSERPDFT------   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~~-------~~~~~~g~~~~~p~~~----------~~~~~~dv~s~g~~~we~~~~~~p~~~------   58 (116)
                      .+||+|||+.....       ........-+.+|++.          ..+...|+||||+.++|+...+.|...      
T Consensus        87 ~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~  166 (484)
T KOG1023|consen   87 VLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVED  166 (484)
T ss_pred             EEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCC
Confidence            68999999975321       0011111223445531          136678999999999998777666321      


Q ss_pred             -HHHHHHHhc-CCCCCCCCCCc-cchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         59 -TEIVESVRK-GEKCLRPSLSE-LTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        59 -~~~~~~l~~-~~~~~~p~~~~-~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                       .++...+++ +....+|.+.. ...++++..++.+||..+|.+||++..|...++.+.+
T Consensus       167 ~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  167 PDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK  226 (484)
T ss_pred             hHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence             256667777 55578888764 3567789999999999999999999999988877654

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.44  E-value=3.5e-14  Score=90.87  Aligned_cols=102  Identities=17%  Similarity=0.179  Sum_probs=65.8

Q ss_pred             eeecCCCCCCHHHHHH-H--HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH-------HHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE-S--VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT-------EIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~--~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~-------~~~~~l~~   67 (116)
                      ++||+|||+++..... .  ...| ..+.+||.   ..++.++|+||+|+++|++..+..|....       ++...+..
T Consensus       140 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~  219 (285)
T cd05605         140 HIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE  219 (285)
T ss_pred             CEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh
Confidence            5899999998531100 0  0112 23456765   23577899999999999998887775321       12222222


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      +. ...|.    ..+..+.+|+.+||..||.+||     ++.++..
T Consensus       220 ~~-~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         220 DQ-EEYSE----KFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             cc-cccCc----ccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            21 11121    5778899999999999999999     7777743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.44  E-value=4.3e-14  Score=91.90  Aligned_cols=101  Identities=17%  Similarity=0.250  Sum_probs=68.9

Q ss_pred             eeecCCCCCCHHHHHH----HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++......    ....| ..+.+||.   ..++.++||||+|+++|++..+..|...   .++...+..+..
T Consensus       134 ~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~  213 (321)
T cd05591         134 HCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV  213 (321)
T ss_pred             CEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC
Confidence            5899999998632110    00112 23566765   2467889999999999999998777432   244555554432


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCC-------CHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERP-------DFTTLK  107 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-------~~~~i~  107 (116)
                      . .|.    .++.++.+++.+|+..+|++|+       +..++.
T Consensus       214 ~-~p~----~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~  252 (321)
T cd05591         214 L-YPV----WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIK  252 (321)
T ss_pred             C-CCC----CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHh
Confidence            2 232    5778899999999999999999       666654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.44  E-value=2.1e-14  Score=93.67  Aligned_cols=101  Identities=15%  Similarity=0.138  Sum_probs=69.1

Q ss_pred             eeecCCCCCCHHHHHH-HHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIVE-SVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~   73 (116)
                      ++||+|||+++..... ....|. .+.+||.   ..++.++||||||+++|++..+..|...   .++...+..+. ...
T Consensus       156 ~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~-~~~  234 (329)
T PTZ00263        156 HVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGR-LKF  234 (329)
T ss_pred             CEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC-cCC
Confidence            5899999998531100 001122 3556764   2357789999999999999998887654   24445555543 222


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCCC-----HHHHH
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERPD-----FTTLK  107 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~-----~~~i~  107 (116)
                      |.    .++..+.+|+.+||..||.+|++     +.+|+
T Consensus       235 p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll  269 (329)
T PTZ00263        235 PN----WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVK  269 (329)
T ss_pred             CC----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence            33    57788999999999999999997     56665

>KOG0589|consensus

Probab=99.44  E-value=1.1e-13  Score=91.96  Aligned_cols=104  Identities=16%  Similarity=0.217  Sum_probs=74.3

Q ss_pred             eeecCCCCCCHHHHHH----HHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .|||+|||+++.-...    ....|. .++.||+   .+|+.++|+||+|..++|+...+.++-.   ..+...+..+.-
T Consensus       144 ~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~  223 (426)
T KOG0589|consen  144 KVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLY  223 (426)
T ss_pred             ceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccC
Confidence            4799999998632111    111132 3566776   4589999999999999999887665432   245555555543


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAA  109 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~  109 (116)
                      .+.|.    ....++..||..|...+|..||+..+++..
T Consensus       224 ~Plp~----~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  224 SPLPS----MYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             CCCCc----cccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            33333    577899999999999999999999999764

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.44  E-value=1.5e-13  Score=87.11  Aligned_cols=107  Identities=16%  Similarity=0.262  Sum_probs=66.7

Q ss_pred             eeecCCCCCCHHHHH--HH----HhcC-CCCCCCCc-----CcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc-C
Q psy12612          2 RVELSDLRILRDEIV--ES----VRKG-EKCLRPNL-----SELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK-G   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~----~~~g-~~~~~p~~-----~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~-~   68 (116)
                      .+||+|||++.....  ..    ...| ..+.+|+.     ..++.++|+||||+++|++..+..|....+....+.. .
T Consensus       146 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  225 (272)
T cd06629         146 ICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLG  225 (272)
T ss_pred             eEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhh
Confidence            589999998853110  00    0011 13445653     1257789999999999999998777533111111111 1


Q ss_pred             CCCCCCCCCc---cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 EKCLRPSLSE---LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~~~~~p~~~~---~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .....+.++.   ..++.++.+++.+||..+|++||++.+|+.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         226 NKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             ccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            1111222211   246789999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.44  E-value=4.8e-14  Score=90.76  Aligned_cols=107  Identities=14%  Similarity=0.142  Sum_probs=65.7

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~   73 (116)
                      ++||+|||++.......    ...+ ..+.+|+.   ..++.++|+||||+++|++..+..|.........+........
T Consensus       153 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~  232 (297)
T cd06656         153 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT  232 (297)
T ss_pred             CEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCC
Confidence            58999999875311000    0011 12344553   2356789999999999999888777543111111111011111


Q ss_pred             CCC-CccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         74 PSL-SELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        74 p~~-~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      |.+ .+...+..+.+++.+||..+|++||++.+|+.
T Consensus       233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         233 PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            111 11256788999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.44  E-value=1.7e-13  Score=85.82  Aligned_cols=103  Identities=19%  Similarity=0.242  Sum_probs=68.3

Q ss_pred             eeecCCCCCCHHHHHHH-H---hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES-V---RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~---~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++....... .   ..| ..+.+|+.   ..++.++|+|++|+++|++..+..|...   .++...+..+..
T Consensus       141 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~  220 (258)
T cd08215         141 LVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY  220 (258)
T ss_pred             cEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC
Confidence            57999999875321110 0   011 12445553   2356789999999999999887766432   233444433332


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...|.    .++.++.+++.+||..+|++||++.+++.
T Consensus       221 ~~~~~----~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         221 PPIPS----QYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             CCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            22222    67889999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.43  E-value=6.2e-14  Score=89.55  Aligned_cols=107  Identities=10%  Similarity=-0.028  Sum_probs=65.0

Q ss_pred             eeecCCCCCCHHHHHH------HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEIVE------SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~------~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~   69 (116)
                      .+||+|||++..-...      .......+.+||.   ..++.++|+||+|+++|++..+..|...   .+....+....
T Consensus       138 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~  217 (287)
T cd07848         138 VLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVL  217 (287)
T ss_pred             cEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhh
Confidence            5899999998642100      0011123556774   3467889999999999999887655321   11111111100


Q ss_pred             ------------------CCCCCCCC---------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 ------------------KCLRPSLS---------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ------------------~~~~p~~~---------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                        ....|...         ...++.++.+|+.+|+..||++||++.+++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         218 GPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             CCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                              00001100         0125677999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.43  E-value=2.5e-13  Score=85.23  Aligned_cols=103  Identities=14%  Similarity=0.221  Sum_probs=68.2

Q ss_pred             eeecCCCCCCHHHHHHHH--hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVESV--RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      ++||+|||++........  ..+ ..+..|+.   ..++.++|+||+|+++|++..+..|.-.   .++...+..+....
T Consensus       141 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  220 (256)
T cd08530         141 LVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPP  220 (256)
T ss_pred             cEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC
Confidence            589999998854221100  011 12334443   2346689999999999999887766322   23344444444322


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .+.    ..+.++.+++.+||..+|++||++.+++.
T Consensus       221 ~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         221 IPP----IYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             Cch----hhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            222    57788999999999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.43  E-value=3.8e-14  Score=92.43  Aligned_cols=102  Identities=15%  Similarity=0.209  Sum_probs=68.8

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCcC----cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNLS----ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~~----~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~   69 (116)
                      ++||+|||+++......    ...| ..+.+||..    .++.++||||+|+++|++..+..|...   .++...+..+.
T Consensus       134 ~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~  213 (330)
T cd05586         134 HIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGK  213 (330)
T ss_pred             CEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCC
Confidence            58999999985321100    0112 245677741    357789999999999999998888653   24445555443


Q ss_pred             CCCCCCCCccchHHHHHHHHHHhccCCCCCCCC----HHHHH
Q psy12612         70 KCLRPSLSELTCEEEVTAIMKRCWNEDPSERPD----FTTLK  107 (116)
Q Consensus        70 ~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~----~~~i~  107 (116)
                      ....    ....+.++.+++.+||..+|.+||+    ..++.
T Consensus       214 ~~~~----~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll  251 (330)
T cd05586         214 VRFP----KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELK  251 (330)
T ss_pred             CCCC----CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHh
Confidence            2211    1246788999999999999999984    55554

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.43  E-value=1.1e-13  Score=87.00  Aligned_cols=106  Identities=12%  Similarity=0.162  Sum_probs=67.7

Q ss_pred             eeecCCCCCCHHHHHHHH-------------hcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHH
Q psy12612          2 RVELSDLRILRDEIVESV-------------RKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIV   62 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-------------~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~   62 (116)
                      .+||+|||++........             .....+..|+.   ..++.++|+||||+++|++..+..|...   .+..
T Consensus       131 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~  210 (265)
T cd05579         131 HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIF  210 (265)
T ss_pred             CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            589999999864322100             01112345553   2246689999999999999887776432   2444


Q ss_pred             HHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         63 ESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        63 ~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      ..+..+. ...|..  ...+..+.+++.+||+.+|++||++..+.+.|
T Consensus       211 ~~~~~~~-~~~~~~--~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l  255 (265)
T cd05579         211 QNILNGK-IEWPED--VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK  255 (265)
T ss_pred             HHHhcCC-cCCCcc--ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence            4444433 222220  12378999999999999999999995554443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.43  E-value=3.4e-14  Score=92.49  Aligned_cols=99  Identities=12%  Similarity=0.203  Sum_probs=67.5

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++......    ...| ..+.+||.   ..++.++||||+|+++|++..+..|...   .+....+.....
T Consensus       134 ~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~  213 (325)
T cd05602         134 HIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL  213 (325)
T ss_pred             CEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc
Confidence            58999999986421100    0012 23566774   3467789999999999999998887543   233344433322


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTT  105 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~  105 (116)
                      ...|     .++.++.+++.+|+..+|.+|++..+
T Consensus       214 ~~~~-----~~~~~~~~li~~~l~~~p~~R~~~~~  243 (325)
T cd05602         214 QLKP-----NITNSARHLLEGLLQKDRTKRLGAKD  243 (325)
T ss_pred             CCCC-----CCCHHHHHHHHHHcccCHHHCCCCCC
Confidence            2222     57788999999999999999998764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.43  E-value=2.3e-13  Score=85.47  Aligned_cols=104  Identities=17%  Similarity=0.258  Sum_probs=66.5

Q ss_pred             eeecCCCCCCHHHHHHH---HhcC-CCCCCCCc---Cc-ccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES---VRKG-EKCLRPNL---SE-LTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g-~~~~~p~~---~~-~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++.......   ...| ..+..|+.   .. ++.++|+||||+++|++..+..|...   .+....+...  
T Consensus       140 ~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~--  217 (258)
T cd06632         140 VVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRS--  217 (258)
T ss_pred             CEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhc--
Confidence            58999999875321111   0011 12345553   12 57789999999999999988777422   1222222221  


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...+.++. .++.++.+++.+||..+|.+||++.+++.
T Consensus       218 ~~~~~~~~-~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         218 KELPPIPD-HLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             ccCCCcCC-CcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            11222222 57889999999999999999999999864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.42  E-value=1.7e-13  Score=86.30  Aligned_cols=104  Identities=17%  Similarity=0.276  Sum_probs=68.5

Q ss_pred             eeecCCCCCCHHHHHHHHh----cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVESVR----KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~----~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------~~~~~~l~~   67 (116)
                      .+||+|||++..-......    .+ ..+.+|+.   ..++.++|+|+||+++|++..+..|...      .+....+..
T Consensus       138 ~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~  217 (264)
T cd06623         138 EVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD  217 (264)
T ss_pred             CEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc
Confidence            5799999987632110000    11 12445654   2346789999999999999887776432      133344433


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..   .+.++...++..+.+++.+||..+|++||++.+++.
T Consensus       218 ~~---~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         218 GP---PPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             CC---CCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            32   222222227889999999999999999999999976

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.42  E-value=1.2e-13  Score=88.26  Aligned_cols=104  Identities=17%  Similarity=0.269  Sum_probs=67.4

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES-----VRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++.......     ......+..|+.   ..++.++|+||||+++|++..+..|...   ......+.....
T Consensus       154 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~  233 (286)
T cd06614         154 SVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI  233 (286)
T ss_pred             CEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC
Confidence            58999999875321110     001123455664   2357789999999999999888777432   122222222221


Q ss_pred             CCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                         +.+. ...++.++.+++.+||+.+|.+||++.+|+.
T Consensus       234 ---~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         234 ---PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             ---CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence               1111 1247889999999999999999999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.42  E-value=3.9e-14  Score=92.25  Aligned_cols=102  Identities=14%  Similarity=0.226  Sum_probs=69.8

Q ss_pred             eeecCCCCCCHHHHH-----HHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIV-----ESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++....     ........+.+||.   ..++.++||||||+++|++..+..|...   .++...+..+. 
T Consensus       134 ~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~-  212 (325)
T cd05594         134 HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE-  212 (325)
T ss_pred             CEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCC-
Confidence            589999999753211     01111224567775   3467889999999999999998887543   23333333322 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      ...|.    ..+.++.+++.+||..||++|+     +..+++.
T Consensus       213 ~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         213 IRFPR----TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             CCCCC----CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence            22232    5788999999999999999996     7888754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.42  E-value=1e-13  Score=90.45  Aligned_cols=102  Identities=15%  Similarity=0.198  Sum_probs=66.8

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcC-CCCCCCCcC----cccCHHHHHHHHHHhcccCCCCCCCCh-------HHHHHH
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKG-EKCLRPNLS----ELTCEEEVTAIMKRCWNEDPSERPDFT-------TEIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g-~~~~~p~~~----~~~~~~dv~s~g~~~we~~~~~~p~~~-------~~~~~~   64 (116)
                      ++||+|||+++.....     ....| ..+.+||..    .++.++||||||+++|++..+..|...       ..+...
T Consensus       143 ~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~  222 (332)
T cd05614         143 HVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRR  222 (332)
T ss_pred             CEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHH
Confidence            5899999998632110     00112 235677751    246789999999999999988877421       123333


Q ss_pred             HhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         65 VRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        65 l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      +....    +.++. ..+..+.+++.+||..||++||     +.+++..
T Consensus       223 ~~~~~----~~~~~-~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         223 ILKCD----PPFPS-FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             HhcCC----CCCCC-CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            33222    22222 5788899999999999999999     6666653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.42  E-value=1.9e-13  Score=90.19  Aligned_cols=107  Identities=9%  Similarity=0.112  Sum_probs=63.6

Q ss_pred             eeecCCCCCCHHHHHH----HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh--------------HH
Q psy12612          2 RVELSDLRILRDEIVE----SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT--------------TE   60 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~--------------~~   60 (116)
                      ++||+|||++......    .......+.+||.   ..++.++||||||+++|++..+..+.|.              ..
T Consensus       195 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~  274 (357)
T PHA03209        195 QVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSH  274 (357)
T ss_pred             CEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHH
Confidence            5899999998632111    1111124567775   3468899999999999998765444321              01


Q ss_pred             HHHHHhc-CCCC-CCC--------------------C------CCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         61 IVESVRK-GEKC-LRP--------------------S------LSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        61 ~~~~l~~-~~~~-~~p--------------------~------~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +...+.. +..+ ..|                    .      +....++.+...||.+||..||.+|||+.+++.
T Consensus       275 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~  350 (357)
T PHA03209        275 LLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN  350 (357)
T ss_pred             HHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence            1111111 1000 000                    0      000134456677999999999999999999865

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.41  E-value=4.8e-14  Score=91.52  Aligned_cols=99  Identities=13%  Similarity=0.171  Sum_probs=66.7

Q ss_pred             eeecCCCCCCHHHHHH----HHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .+||+|||++......    ....|. .+.+||.   ..++.++||||||+++|++..+..|...   .+....+..+..
T Consensus       136 ~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~  215 (318)
T cd05582         136 HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL  215 (318)
T ss_pred             cEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC
Confidence            5899999998642111    000121 3456664   2357789999999999999998877532   234444443322


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTT  105 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~  105 (116)
                       ..|.    .++.++.+|+.+||+.||++||+..+
T Consensus       216 -~~p~----~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         216 -GMPQ----FLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             -CCCC----CCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence             2232    57888999999999999999999543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0582|consensus

Probab=99.41  E-value=1.5e-13  Score=91.05  Aligned_cols=106  Identities=11%  Similarity=0.146  Sum_probs=68.1

Q ss_pred             eeecCCCCCCHHHHH---------HHHhcCCCCCCCCc-----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHH
Q psy12612          2 RVELSDLRILRDEIV---------ESVRKGEKCLRPNL-----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~---------~~~~~g~~~~~p~~-----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~   64 (116)
                      .|||+|||.+..-+.         ........+++||+     .-|+.++||||||++..|+..+.-|+..   .+++..
T Consensus       164 ~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~  243 (516)
T KOG0582|consen  164 TVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLL  243 (516)
T ss_pred             cEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHH
Confidence            589999997632110         11111124678886     2389999999999999999888777533   122222


Q ss_pred             HhcCCCCCCCCC---Cc---cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         65 VRKGEKCLRPSL---SE---LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        65 l~~~~~~~~p~~---~~---~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      -.++. ++.+..   +.   ...+..+++++..|+..||++|||.++++.
T Consensus       244 tLqn~-pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  244 TLQND-PPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             HhcCC-CCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            11222 222211   11   124567899999999999999999998864

>KOG0583|consensus

Probab=99.41  E-value=1.6e-13  Score=90.89  Aligned_cols=101  Identities=18%  Similarity=0.166  Sum_probs=72.7

Q ss_pred             eeecCCCCCCHHHH-H-HHH--hcCC-CCCCCCc---Cc-cc-CHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcC
Q psy12612          2 RVELSDLRILRDEI-V-ESV--RKGE-KCLRPNL---SE-LT-CEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~-~-~~~--~~g~-~~~~p~~---~~-~~-~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~   68 (116)
                      ++||+|||+++..- . ...  ..|. .+.+||+   .. |+ .++||||+|++++.+..+..|+-+.   .+...+..+
T Consensus       159 ~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~  238 (370)
T KOG0583|consen  159 NLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG  238 (370)
T ss_pred             CEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC
Confidence            69999999997431 1 111  1232 4678886   23 54 6799999999999999998886542   333444444


Q ss_pred             CCCCCCCCCccch-HHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         69 EKCLRPSLSELTC-EEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        69 ~~~~~p~~~~~~~-~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                      .-. -|.    .+ +.++..|+.+|...+|.+|++..+|+
T Consensus       239 ~~~-~p~----~~~S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  239 EFK-IPS----YLLSPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             Ccc-CCC----CcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            322 232    45 88999999999999999999999997

>KOG0579|consensus

Probab=99.41  E-value=7.8e-13  Score=91.62  Aligned_cols=107  Identities=16%  Similarity=0.256  Sum_probs=72.2

Q ss_pred             eeecCCCCCCHHHHHH--HHhc--CC-CCCCCCc--------CcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE--SVRK--GE-KCLRPNL--------SELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~--g~-~~~~p~~--------~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~   68 (116)
                      .+||+|||.|......  .-.+  |. .+++|++        .+|++++||||||+++-|+.-..-|......++.+.+.
T Consensus       168 dirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKi  247 (1187)
T KOG0579|consen  168 DIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI  247 (1187)
T ss_pred             cEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHH
Confidence            4899999998543211  1111  32 3667876        25899999999999999987776664432233333332


Q ss_pred             CCCCCCCC-CccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 EKCLRPSL-SELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~~~~~p~~-~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .....|.+ .++....++.+++..|+..||..||+..+|+.
T Consensus       248 aKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  248 AKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             hhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence            22223333 23378889999999999999999999998864

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.41  E-value=9.5e-14  Score=91.12  Aligned_cols=102  Identities=12%  Similarity=0.114  Sum_probs=70.0

Q ss_pred             eeecCCCCCCHHHHHH-HHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIVE-SVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~   73 (116)
                      ++||+|||++...... ....|. .+.+||.   ..++.++|+||||+++|++..+..|...   ..+...+..+... .
T Consensus       169 ~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~  247 (340)
T PTZ00426        169 FIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIY-F  247 (340)
T ss_pred             CEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC-C
Confidence            5899999998531100 001122 3566775   2357789999999999999998888654   2344455554432 2


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      |.    ..+.++.+++.+|+..+|.+|+     +++++..
T Consensus       248 p~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        248 PK----FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE  283 (340)
T ss_pred             CC----CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence            32    5778899999999999999995     7888754

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.41  E-value=1e-13  Score=90.20  Aligned_cols=98  Identities=14%  Similarity=0.197  Sum_probs=67.3

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .+||+|||++.......    ...| ..+.+||.   ..++.++||||||+++|++..+..|...   .++...+..+..
T Consensus       134 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~  213 (323)
T cd05575         134 HVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL  213 (323)
T ss_pred             cEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC
Confidence            58999999986421110    0012 23566775   3467789999999999999998877543   244444444432


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFT  104 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~  104 (116)
                      ...+     ..+.++.+++.+|+..+|.+||+..
T Consensus       214 ~~~~-----~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         214 RLKP-----NISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             CCCC-----CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            2233     4678899999999999999999863

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0599|consensus

Probab=99.41  E-value=8.1e-13  Score=83.48  Aligned_cols=106  Identities=17%  Similarity=0.208  Sum_probs=77.4

Q ss_pred             CeeecCCCCCCHH----HHHHHHhcCCCCCCCCc---------CcccCHHHHHHHHHHhcccCCCCCCCCh-HH--HHHH
Q psy12612          1 MRVELSDLRILRD----EIVESVRKGEKCLRPNL---------SELTCEEEVTAIMKRCWNEDPSERPDFT-TE--IVES   64 (116)
Q Consensus         1 ~~vKi~Dfgls~~----~~~~~~~~g~~~~~p~~---------~~~~~~~dv~s~g~~~we~~~~~~p~~~-~~--~~~~   64 (116)
                      |++||+|||++..    +-...+++...+.+|+.         +-|+...|+|+.|++++-+..+.-|++. ++  ++..
T Consensus       160 ~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~  239 (411)
T KOG0599|consen  160 MNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRM  239 (411)
T ss_pred             cceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHH
Confidence            6899999999853    12233333334667764         3478889999999999999998878765 23  3456


Q ss_pred             HhcCCCCCC-CCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         65 VRKGEKCLR-PSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        65 l~~~~~~~~-p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +..|.-..+ |.+  .+.+.+.++||.+|+..||++|-|.++++.
T Consensus       240 ImeGkyqF~speW--adis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  240 IMEGKYQFRSPEW--ADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             HHhcccccCCcch--hhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            666665332 222  367888999999999999999999988754

>PTZ00284 protein kinase; Provisional

Probab=99.41  E-value=2.6e-13  Score=92.32  Aligned_cols=107  Identities=14%  Similarity=0.100  Sum_probs=65.0

Q ss_pred             eeecCCCCCCHHHHHH--HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC---
Q psy12612          2 RVELSDLRILRDEIVE--SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK---   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~---   70 (116)
                      ++||+|||++......  .......+.+||+   ..|+.++||||||+++||+..+..|+..   .+.+..+.....   
T Consensus       286 ~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p  365 (467)
T PTZ00284        286 RVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLP  365 (467)
T ss_pred             eEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCC
Confidence            5999999987532111  1111124677886   3478899999999999999988766421   111111111000   


Q ss_pred             --------------------CCCCCCCc--------------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 --------------------CLRPSLSE--------------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 --------------------~~~p~~~~--------------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                          ..+|...+              ......+.+||..|+..||.+||+..+++.
T Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        366 SEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             HHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence                                00010000              001245679999999999999999999875

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.40  E-value=4.1e-13  Score=89.66  Aligned_cols=107  Identities=15%  Similarity=0.145  Sum_probs=65.3

Q ss_pred             eeecCCCCCCHHHHH---HHH--hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH-----------HH
Q psy12612          2 RVELSDLRILRDEIV---ESV--RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT-----------EI   61 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~---~~~--~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~-----------~~   61 (116)
                      .+||+|||++.....   ...  ..|. .+.+||.   ..++.++||||||+++|++.++..|.+..           ++
T Consensus       220 ~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l  299 (391)
T PHA03212        220 DVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQI  299 (391)
T ss_pred             CEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHH
Confidence            589999999853110   000  1122 3457775   34688999999999999988776654320           11


Q ss_pred             HHHHhc-CC------------------------C---CCCCCCCc-cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         62 VESVRK-GE------------------------K---CLRPSLSE-LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        62 ~~~l~~-~~------------------------~---~~~p~~~~-~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...+.. |.                        .   ..+|.... ...+.++.+|+.+|++.||.+|||..+++.
T Consensus       300 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        300 KLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             HHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence            000000 00                        0   00111000 134668899999999999999999999874

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.40  E-value=1.4e-13  Score=87.70  Aligned_cols=107  Identities=12%  Similarity=0.067  Sum_probs=63.9

Q ss_pred             eeecCCCCCCHHHHHH-HHh---c-CCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE-SVR---K-GEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~~---~-g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      ++||+|||++...... ...   . ...+.+||.    ..++.++|+||||+++|++.++..|...    ......+...
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~  218 (285)
T cd07861         139 VIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRIL  218 (285)
T ss_pred             cEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHh
Confidence            5899999988531100 000   0 123456764    2357789999999999999887555321    0111111100


Q ss_pred             CC----------------CCCCC-----C--CccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 EK----------------CLRPS-----L--SELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~~----------------~~~p~-----~--~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..                ...+.     +  ....++.++.+++.+||..||.+||++.+|+.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         219 GTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             CCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            00                00000     0  00136778899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG1989|consensus

Probab=99.40  E-value=4.6e-13  Score=93.91  Aligned_cols=78  Identities=13%  Similarity=0.179  Sum_probs=58.6

Q ss_pred             ccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy12612         33 LTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK  112 (116)
Q Consensus        33 ~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~  112 (116)
                      .+.++|||++|+.+|-+..+..|+-. .-..+|.+|.....| .  ......++.||..|+..+|.+||+.-+++..+..
T Consensus       235 I~eKsDIWALGclLYkLCy~t~PFe~-sg~laIlng~Y~~P~-~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~  310 (738)
T KOG1989|consen  235 IGEKSDIWALGCLLYKLCYFTTPFEE-SGKLAILNGNYSFPP-F--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE  310 (738)
T ss_pred             CcchhHHHHHHHHHHHHHHhCCCcCc-CcceeEEeccccCCC-C--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence            47899999999999998888777542 212344444432222 1  1588899999999999999999999999888877


Q ss_pred             hh
Q psy12612        113 LN  114 (116)
Q Consensus       113 ~~  114 (116)
                      +.
T Consensus       311 l~  312 (738)
T KOG1989|consen  311 LA  312 (738)
T ss_pred             Hh
Confidence            64

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.40  E-value=2.3e-13  Score=85.85  Aligned_cols=103  Identities=16%  Similarity=0.191  Sum_probs=68.3

Q ss_pred             eeecCCCCCCHHHHHH----HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~~~~l~~~~   69 (116)
                      ++||+|||++......    .......+..|+.   ..++.++|+|++|+++|++..+..|...     .++...+..+.
T Consensus       131 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  210 (262)
T cd05572         131 YVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN  210 (262)
T ss_pred             CEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC
Confidence            5899999987632111    0111123456664   2357789999999999999887777532     12333333222


Q ss_pred             -CCCCCCCCccchHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q psy12612         70 -KCLRPSLSELTCEEEVTAIMKRCWNEDPSERPD-----FTTLKA  108 (116)
Q Consensus        70 -~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~-----~~~i~~  108 (116)
                       ....|.    .++.++.++|.+||..+|++||+     +.++..
T Consensus       211 ~~~~~~~----~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         211 GKLEFPN----YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             CCCCCCc----ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence             222332    46889999999999999999999     888765

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.40  E-value=1.1e-13  Score=90.44  Aligned_cols=97  Identities=12%  Similarity=0.204  Sum_probs=63.7

Q ss_pred             eeecCCCCCCHHHHH-----HHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------------HHH
Q psy12612          2 RVELSDLRILRDEIV-----ESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------------TEI   61 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------------~~~   61 (116)
                      ++||+|||+++....     ........+.+||.   ..++.++|+||||+++|++..+..|...            ..+
T Consensus       134 ~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~  213 (329)
T cd05618         134 HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL  213 (329)
T ss_pred             CEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHH
Confidence            589999999864211     00111123566775   3457789999999999999888777420            012


Q ss_pred             HHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         62 VESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        62 ~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                      ...+... ....|.    ..+.++.+++.+||..||++||+.
T Consensus       214 ~~~i~~~-~~~~p~----~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         214 FQVILEK-QIRIPR----SLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             HHHHhcC-CCCCCC----CCCHHHHHHHHHHhcCCHHHcCCC
Confidence            2222222 222232    577889999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.40  E-value=2.3e-13  Score=89.58  Aligned_cols=107  Identities=7%  Similarity=-0.006  Sum_probs=64.3

Q ss_pred             eeecCCCCCCHHHHHHHHh---cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHh----
Q psy12612          2 RVELSDLRILRDEIVESVR---KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVR----   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~---~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~----   66 (116)
                      ++||+|||+++........   .| ..+.+||.   ..++.++||||||+++|++..+..|...    ......+.    
T Consensus       157 ~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  236 (355)
T cd07874         157 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT  236 (355)
T ss_pred             CEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            5899999998642111110   11 23556765   2467889999999999999887766422    01110000    


Q ss_pred             ------------------cCCC---CCCCC------CC-----ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 ------------------KGEK---CLRPS------LS-----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ------------------~~~~---~~~p~------~~-----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                        ....   ...|.      ++     ....+.++.+|+.+|+..||++|||+.+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~  310 (355)
T cd07874         237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ  310 (355)
T ss_pred             CCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence                              0000   00000      00     0013456789999999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.40  E-value=1.9e-13  Score=87.50  Aligned_cols=106  Identities=16%  Similarity=0.110  Sum_probs=65.5

Q ss_pred             eeecCCCCCCHHHH----HHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEI----VESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~----~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~~   71 (116)
                      ++||+|||++....    .........+.+|+.   ..++.++|+||+|+++|++..+..|....   .....+......
T Consensus       140 ~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~  219 (285)
T cd05632         140 HIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLE  219 (285)
T ss_pred             CEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhc
Confidence            58999999884210    000111124556775   33677899999999999998887775321   111122111111


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPD-----FTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~-----~~~i~~  108 (116)
                      ..+..+ ...+.++.+|+..||..+|++||+     +.++..
T Consensus       220 ~~~~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         220 TEEVYS-AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             cccccC-ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence            111111 157788999999999999999999     556544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.40  E-value=1.8e-13  Score=89.09  Aligned_cols=97  Identities=14%  Similarity=0.211  Sum_probs=66.5

Q ss_pred             eeecCCCCCCHHHHHH----HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++......    ....| ..+.+||.   ..++.++|+||+|+++|++..+..|...   .++...+..+. 
T Consensus       139 ~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~-  217 (324)
T cd05587         139 HIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN-  217 (324)
T ss_pred             CEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-
Confidence            5899999998632110    00112 23567775   3367889999999999999988777432   24444554432 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                      ...|.    ..+.++.+++.+||..+|.+|++.
T Consensus       218 ~~~~~----~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         218 VSYPK----SLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             CCCCC----CCCHHHHHHHHHHhhcCHHHcCCC
Confidence            22232    577889999999999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.39  E-value=1.6e-13  Score=89.63  Aligned_cols=96  Identities=14%  Similarity=0.214  Sum_probs=63.3

Q ss_pred             eeecCCCCCCHHHHH-----HHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------------HHH
Q psy12612          2 RVELSDLRILRDEIV-----ESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------------TEI   61 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------------~~~   61 (116)
                      .+||+|||+++....     ........+.+||.   ..++.++|+||||+++|++..+..|...            ..+
T Consensus       134 ~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~  213 (329)
T cd05588         134 HIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYL  213 (329)
T ss_pred             CEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHH
Confidence            589999999863211     11111123566775   2467789999999999999887776420            012


Q ss_pred             HHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCC
Q psy12612         62 VESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPD  102 (116)
Q Consensus        62 ~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~  102 (116)
                      ...+..+. ...|.    .++.++.+++.+|+..||.+|++
T Consensus       214 ~~~~~~~~-~~~p~----~~~~~~~~li~~~L~~dP~~R~~  249 (329)
T cd05588         214 FQVILEKQ-IRIPR----SLSVKASSVLKGFLNKDPKERLG  249 (329)
T ss_pred             HHHHHcCC-CCCCC----CCCHHHHHHHHHHhccCHHHcCC
Confidence            22333222 22232    57788999999999999999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.39  E-value=1.4e-13  Score=89.62  Aligned_cols=97  Identities=14%  Similarity=0.205  Sum_probs=67.0

Q ss_pred             eeecCCCCCCHHHHH----HHHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIV----ESVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++....    .....|. .+.+||.   ..++.++|+||||+++|++..+..|...   .++...+..+..
T Consensus       139 ~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~  218 (323)
T cd05616         139 HIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV  218 (323)
T ss_pred             cEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            589999999863211    0011122 3566775   3467889999999999999988877543   244444544332


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                       ..|.    ..+.++.+++.+|+..+|.+|++.
T Consensus       219 -~~p~----~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         219 -AYPK----SMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             -CCCC----cCCHHHHHHHHHHcccCHHhcCCC
Confidence             2232    577889999999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.39  E-value=6.4e-13  Score=87.60  Aligned_cols=107  Identities=11%  Similarity=0.090  Sum_probs=65.0

Q ss_pred             eeecCCCCCCHHHHHHHHh---cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH----H---HHH----
Q psy12612          2 RVELSDLRILRDEIVESVR---KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT----E---IVE----   63 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~---~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~----~---~~~----   63 (116)
                      ++||+|||+++........   .| ..+.+||.   ..++.++||||+|+++|++..+..|....    .   +..    
T Consensus       161 ~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~  240 (359)
T cd07876         161 TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGT  240 (359)
T ss_pred             CEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            5899999998642111110   11 23567775   34678899999999999998877664310    0   000    


Q ss_pred             -----------HHhc--CCCCCCCCCC----------------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         64 -----------SVRK--GEKCLRPSLS----------------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        64 -----------~l~~--~~~~~~p~~~----------------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                 .+..  ..+...+...                ....+.++.+|+.+||..||++||++.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         241 PSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             CcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence                       0000  0000000000                0023467889999999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.39  E-value=5e-13  Score=89.17  Aligned_cols=107  Identities=13%  Similarity=0.140  Sum_probs=66.6

Q ss_pred             eeecCCCCCCHHHHHH-----H-HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH-------HHHHH
Q psy12612          2 RVELSDLRILRDEIVE-----S-VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT-------EIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~-~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~-------~~~~~   64 (116)
                      ++||+|||++..-...     . ...| ..+.+||.   ..++.++||||||+++|++..+..|.+..       ++...
T Consensus       223 ~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i  302 (392)
T PHA03207        223 NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSI  302 (392)
T ss_pred             CEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHH
Confidence            5899999998531110     0 0012 23557775   34678999999999999998887776431       11111


Q ss_pred             Hh----------------------cCCCCCCCCCC------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         65 VR----------------------KGEKCLRPSLS------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        65 l~----------------------~~~~~~~p~~~------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +.                      ......++...      ....+.++.++|.+|+..+|++||++.+++.
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~  374 (392)
T PHA03207        303 IRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS  374 (392)
T ss_pred             HHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence            11                      00001111111      0134567889999999999999999999865

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.38  E-value=1.8e-13  Score=89.23  Aligned_cols=97  Identities=13%  Similarity=0.177  Sum_probs=64.0

Q ss_pred             eeecCCCCCCHHHHH-----HHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----------HHHHH
Q psy12612          2 RVELSDLRILRDEIV-----ESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----------TEIVE   63 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----------~~~~~   63 (116)
                      ++||+|||++.....     ........+.+||.   ..++.++|+||||+++|++..+..|...          ..+..
T Consensus       134 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~  213 (327)
T cd05617         134 HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQ  213 (327)
T ss_pred             CEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHH
Confidence            589999999863211     00111123567775   3467899999999999999888777521          12222


Q ss_pred             HHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         64 SVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        64 ~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                      .+... ....|.    ..+..+.+++.+|+..||.+|++.
T Consensus       214 ~~~~~-~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         214 VILEK-PIRIPR----FLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             HHHhC-CCCCCC----CCCHHHHHHHHHHhccCHHHcCCC
Confidence            22222 222233    577889999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.38  E-value=7.1e-13  Score=83.81  Aligned_cols=103  Identities=13%  Similarity=0.137  Sum_probs=64.3

Q ss_pred             eeecCCCCCCHHHHHH-------HHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE-------SVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-------~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~   67 (116)
                      .+||+|||+++.....       ....|. .+.+|+.   ..++.++|+||||+++|++..+..|....   .....+..
T Consensus       144 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~  223 (265)
T cd06652         144 NVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT  223 (265)
T ss_pred             CEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc
Confidence            5899999988631100       000121 3456664   23567899999999999999887774321   11111211


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .  ...|.++. ..+..+..++.+||. +|.+||++++|+.
T Consensus       224 ~--~~~~~~~~-~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         224 Q--PTNPVLPP-HVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             C--CCCCCCch-hhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            1  11222222 456778899999995 8999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.38  E-value=3.5e-13  Score=85.88  Aligned_cols=107  Identities=19%  Similarity=0.117  Sum_probs=63.7

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc--
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK--   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~--   67 (116)
                      ++||+|||++.......    ...+ ..+.+|+.    ..++.++|+||||+++|++..+..|...   .+....+..  
T Consensus       138 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~  217 (286)
T cd07847         138 QIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTL  217 (286)
T ss_pred             cEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence            58999999985311000    0011 12345654    2356789999999999999887765321   111111111  


Q ss_pred             ------------------CCCCCCCC----CC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 ------------------GEKCLRPS----LS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ------------------~~~~~~p~----~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                        +.....+.    +.  ....+..+.+++.+||..+|++||++.+++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         218 GDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             CCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence                              00000110    00  0135677899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0615|consensus

Probab=99.38  E-value=3.2e-13  Score=88.73  Aligned_cols=106  Identities=12%  Similarity=0.139  Sum_probs=75.7

Q ss_pred             eeecCCCCCCHHH----HHHHHhcCCCCCCCCcC------cccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDE----IVESVRKGEKCLRPNLS------ELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~----~~~~~~~g~~~~~p~~~------~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      .+||+||||++..    ..+..++...+.+||+.      .+..+.|+||+|+.+|-..++.-|+-.    ..+.+++.+
T Consensus       317 llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~  396 (475)
T KOG0615|consen  317 LLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK  396 (475)
T ss_pred             EEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc
Confidence            5899999999742    12333333457789872      133478999999999988777655322    136677877


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      |....-|.. ...+..+...||...+..||++||+..+.+.
T Consensus       397 G~y~f~p~~-w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  397 GRYAFGPLQ-WDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             CcccccChh-hhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            776544421 2368889999999999999999999998864

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.38  E-value=8.9e-14  Score=90.56  Aligned_cols=98  Identities=14%  Similarity=0.191  Sum_probs=67.3

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++.....     .......+.+||.   ..++.++||||||+++|++..+..|...   .++...+..+..
T Consensus       134 ~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~  213 (325)
T cd05604         134 HVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL  213 (325)
T ss_pred             CEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc
Confidence            5899999998642110     0111123567775   2467889999999999999988877543   244444444433


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFT  104 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~  104 (116)
                      ...|     ..+.++.+++.+|+..+|.+||+..
T Consensus       214 ~~~~-----~~~~~~~~ll~~ll~~~p~~R~~~~  242 (325)
T cd05604         214 VLRP-----GASLTAWSILEELLEKDRQRRLGAK  242 (325)
T ss_pred             cCCC-----CCCHHHHHHHHHHhccCHHhcCCCC
Confidence            3233     4678889999999999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.37  E-value=1.7e-13  Score=87.76  Aligned_cols=103  Identities=18%  Similarity=0.180  Sum_probs=66.2

Q ss_pred             eeecCCCCCCHHHHHH-HH--hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH------HHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE-SV--RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT------EIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~--~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~------~~~~~l~~~   68 (116)
                      ++||+|||++...... ..  ..| ..+.+|+.   ..++.++|+||+|+++|++..+..|....      .....+...
T Consensus       140 ~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~  219 (285)
T cd05630         140 HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE  219 (285)
T ss_pred             CEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh
Confidence            5899999988531100 00  112 23556765   23678899999999999998887775420      111111111


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPD-----FTTLKA  108 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~-----~~~i~~  108 (116)
                      .....+.    .++.++.+|+.+||..||++||+     +.++..
T Consensus       220 ~~~~~~~----~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         220 VQEEYSE----KFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             hhhhcCc----cCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            1111122    57788999999999999999999     677765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG1187|consensus

Probab=99.37  E-value=8.6e-13  Score=87.24  Aligned_cols=115  Identities=18%  Similarity=0.248  Sum_probs=73.4

Q ss_pred             CeeecCCCCCCHHHHH--HHHh---cC-CCCCCCCcC---cccCHHHHHHHHHHhcccCCCCCCCCh------HHH----
Q psy12612          1 MRVELSDLRILRDEIV--ESVR---KG-EKCLRPNLS---ELTCEEEVTAIMKRCWNEDPSERPDFT------TEI----   61 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~~--~~~~---~g-~~~~~p~~~---~~~~~~dv~s~g~~~we~~~~~~p~~~------~~~----   61 (116)
                      ++.||+||||++..-.  ..+.   .| ..+..|++.   ..+.++||||||+.+.|+.+++++...      ..+    
T Consensus       214 ~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~  293 (361)
T KOG1187|consen  214 FNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWA  293 (361)
T ss_pred             CCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHH
Confidence            4789999999964321  1111   33 246778863   467899999999999998776644210      011    


Q ss_pred             HHHHhcCCC--CCCCCCC-cc----chHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         62 VESVRKGEK--CLRPSLS-EL----TCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        62 ~~~l~~~~~--~~~p~~~-~~----~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      ...+..+..  ...|.+. ..    ..-..+.++...|.+.+|.+||++.+++..|+.+.+
T Consensus       294 ~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  294 KPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            123333322  3344443 11    122346678889999999999999999998876543

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.37  E-value=3.3e-13  Score=84.16  Aligned_cols=104  Identities=14%  Similarity=0.250  Sum_probs=66.1

Q ss_pred             eeecCCCCCCHHHHHH---HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVE---SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~~   71 (116)
                      .+||+|||++......   ....+ ..+..||.   ..++.++|+|+||+++|++..+..|....   +.........  
T Consensus       136 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--  213 (253)
T cd05122         136 EVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNG--  213 (253)
T ss_pred             eEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcC--
Confidence            5899999987532111   01112 12445553   22467899999999999998887764321   2222222211  


Q ss_pred             CCCCCCc-cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSE-LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~-~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       .+.++. ..++.++.+++.+||..+|++||++.+++.
T Consensus       214 -~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         214 -PPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             -CCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             222221 134788999999999999999999999864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.37  E-value=2.9e-13  Score=88.26  Aligned_cols=104  Identities=10%  Similarity=0.094  Sum_probs=67.9

Q ss_pred             eeecCCCCCCHHHH-----HHHHhcC-CCCCCCCcC---------cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHH
Q psy12612          2 RVELSDLRILRDEI-----VESVRKG-EKCLRPNLS---------ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVE   63 (116)
Q Consensus         2 ~vKi~Dfgls~~~~-----~~~~~~g-~~~~~p~~~---------~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~   63 (116)
                      ++||+|||++..-.     ......| ..+.+||..         .++.++||||||+++|++..+..|...   .....
T Consensus       140 ~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~  219 (330)
T cd05601         140 HIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYN  219 (330)
T ss_pred             CEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHH
Confidence            58999999985211     0011112 235566641         246789999999999999998877542   23334


Q ss_pred             HHhcCCC-CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         64 SVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        64 ~l~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .+....+ ...|..  ...+.++.+|+..|+. +|.+||++.+++.
T Consensus       220 ~i~~~~~~~~~~~~--~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         220 NIMNFQRFLKFPED--PKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             HHHcCCCccCCCCC--CCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            4443332 111211  1467889999999997 9999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.37  E-value=7.2e-13  Score=84.94  Aligned_cols=107  Identities=9%  Similarity=0.031  Sum_probs=65.4

Q ss_pred             eeecCCCCCCHHHHHH--HH--hc-CCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEIVE--SV--RK-GEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~--~~-g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~   69 (116)
                      ++||+|||+++.....  ..  .. ...+.+||.    ..++.++||||+|+++|++..+..|...   .+.+..+....
T Consensus       141 ~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~  220 (288)
T cd07871         141 ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLL  220 (288)
T ss_pred             CEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            5899999998532110  00  01 123556774    2367899999999999999888766432   11111111100


Q ss_pred             C------------------CCCCCC------C-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 K------------------CLRPSL------S-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~------------------~~~p~~------~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .                  ...|..      . ....+.+..+|+.+|+..||.+|||+.+++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         221 GTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             CCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            0                  000000      0 0135677889999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.37  E-value=3.3e-13  Score=86.19  Aligned_cols=97  Identities=16%  Similarity=0.203  Sum_probs=61.8

Q ss_pred             eeecCCCCCCHHHHH--HHH--hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-------HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV--ESV--RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-------TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~--~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-------~~~~~~l~   66 (116)
                      .+||+|||++..-..  ...  ..| ..+.+||.   ..++.++|+||||+++|++..+..|...       ..+...+.
T Consensus       135 ~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  214 (280)
T cd05608         135 NVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRIL  214 (280)
T ss_pred             CEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhc
Confidence            489999999852110  000  012 23556775   3467889999999999999887777432       01111111


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                      .+. ...|    ..++.++.+++.+||+.+|++||++
T Consensus       215 ~~~-~~~~----~~~~~~~~~li~~~l~~~P~~R~~~  246 (280)
T cd05608         215 NDS-VTYP----DKFSPASKSFCEALLAKDPEKRLGF  246 (280)
T ss_pred             ccC-CCCc----ccCCHHHHHHHHHHhcCCHHHhcCC
Confidence            111 1111    1578899999999999999999954

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.36  E-value=1.1e-12  Score=94.33  Aligned_cols=80  Identities=14%  Similarity=0.069  Sum_probs=52.5

Q ss_pred             CCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCC
Q psy12612         25 CLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSER  100 (116)
Q Consensus        25 ~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~R  100 (116)
                      +.+||.   ..|+.++||||||+++||+.....|... ......+.....+..+.    ........++..||..+|.+|
T Consensus       181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~L~~~P~~R  256 (793)
T PLN00181        181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQIL----LNWPKEASFCLWLLHPEPSCR  256 (793)
T ss_pred             eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhh----hcCHHHHHHHHHhCCCChhhC
Confidence            567875   3478899999999999999875444221 12222332222111110    123445688999999999999


Q ss_pred             CCHHHHHH
Q psy12612        101 PDFTTLKA  108 (116)
Q Consensus       101 p~~~~i~~  108 (116)
                      |++.+|+.
T Consensus       257 ps~~eil~  264 (793)
T PLN00181        257 PSMSELLQ  264 (793)
T ss_pred             cChHHHhh
Confidence            99999864

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.36  E-value=1.2e-12  Score=81.06  Aligned_cols=105  Identities=15%  Similarity=0.184  Sum_probs=68.6

Q ss_pred             eeecCCCCCCHHHHHH---HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE---SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~~   70 (116)
                      ++||+|||++......   ....+ ..+..|+.   ..++.++|+|++|.++|++..+..|...    ..+...+..+..
T Consensus       125 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~  204 (244)
T smart00220      125 HVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKP  204 (244)
T ss_pred             cEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCC
Confidence            5799999987532211   01112 23445653   2356789999999999998887666422    234444444433


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...+.  ...++.++.+++.+||..+|++||++.+++.
T Consensus       205 ~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      205 PFPPP--EWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             CCccc--cccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            22211  0017789999999999999999999999875

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.36  E-value=1.1e-12  Score=84.11  Aligned_cols=107  Identities=8%  Similarity=0.008  Sum_probs=64.5

Q ss_pred             eeecCCCCCCHHHHHHHH-----hcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc-
Q psy12612          2 RVELSDLRILRDEIVESV-----RKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK-   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-----~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~-   67 (116)
                      ++||+|||+++.-.....     .....+.+||.    ..++.++|+||||+++|++..+..|...    .+....... 
T Consensus       149 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~  228 (295)
T cd07837         149 LLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLL  228 (295)
T ss_pred             eEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            589999998853211000     01123456663    2357789999999999999887666432    111111110 


Q ss_pred             --CCCC------------CCCCCC-------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 --GEKC------------LRPSLS-------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 --~~~~------------~~p~~~-------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        ....            ..|...       ....+.++.+++.+||..+|.+||++.+++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         229 GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             CCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence              0000            000000       0136678999999999999999999999864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.36  E-value=1e-12  Score=85.88  Aligned_cols=107  Identities=12%  Similarity=0.025  Sum_probs=64.2

Q ss_pred             eeecCCCCCCHHHHHHH----------HhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHH
Q psy12612          2 RVELSDLRILRDEIVES----------VRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----------~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~   64 (116)
                      .+||+|||++.......          ......+.+|+.    ..++.++|+||||+++|++..+..|...   .+....
T Consensus       145 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~  224 (337)
T cd07852         145 RVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEK  224 (337)
T ss_pred             cEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            58999999886321100          001112456664    2356789999999999999887655321   011110


Q ss_pred             Hhc-----------------------CCC-CCCCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         65 VRK-----------------------GEK-CLRPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        65 l~~-----------------------~~~-~~~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +..                       ... ...+.+.  ...++.++.+++..||..+|++||++.+++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~  294 (337)
T cd07852         225 IIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE  294 (337)
T ss_pred             HHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence            000                       000 0001000  0136788999999999999999999999875

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0661|consensus

Probab=99.36  E-value=1.6e-12  Score=86.82  Aligned_cols=105  Identities=14%  Similarity=0.142  Sum_probs=65.5

Q ss_pred             eeecCCCCCCHHHH-----HHHHhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHHHH---H
Q psy12612          2 RVELSDLRILRDEI-----VESVRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEIVE---S   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~-----~~~~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~~~---~   64 (116)
                      .|||+||||+|+-.     .+.+ +..-+-+||+    ..|+.+.|||++|.++.|+...+ |-|.     .++..   .
T Consensus       148 ~iKiaDFGLARev~SkpPYTeYV-STRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLr-PLFPG~sE~Dqi~KIc~V  225 (538)
T KOG0661|consen  148 VIKIADFGLAREVRSKPPYTEYV-STRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLR-PLFPGASEIDQIYKICEV  225 (538)
T ss_pred             eeEecccccccccccCCCcchhh-hcccccchHHhhhccccCCchHHHHHHHHHHHHHHhc-ccCCCCcHHHHHHHHHHH
Confidence            58999999998632     1122 1222446776    35889999999999999965442 3221     11111   1


Q ss_pred             --------------Hhc--CCC-CCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         65 --------------VRK--GEK-CLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        65 --------------l~~--~~~-~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                    +.+  +.+ +..+..+-    ..++.+..+||.+|.+.||.+|||.++.++
T Consensus       226 LGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~  290 (538)
T KOG0661|consen  226 LGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ  290 (538)
T ss_pred             hCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence                          111  111 11111110    247788999999999999999999998864

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.35  E-value=1e-12  Score=84.42  Aligned_cols=107  Identities=12%  Similarity=-0.015  Sum_probs=63.8

Q ss_pred             eeecCCCCCCHHHHHHH--H----hcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES--V----RKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~----~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~   68 (116)
                      ++||+|||++.......  .    .....+.+|+.    ..++.++||||||+++|++..+..|....   +.+..+...
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~  233 (302)
T cd07864         154 QIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRL  233 (302)
T ss_pred             cEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            58999999885321100  0    00112445653    12467899999999999998775443211   111111111


Q ss_pred             --CC--CCCCCC---------------------CccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 --EK--CLRPSL---------------------SELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 --~~--~~~p~~---------------------~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        ..  ...|.+                     ....++..+.+++.+||..+|.+||++.+|+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             hCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence              00  000100                     00136788999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.35  E-value=5.8e-13  Score=85.63  Aligned_cols=105  Identities=18%  Similarity=0.184  Sum_probs=67.4

Q ss_pred             eeecCCCCCCHHHHHH----HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~   70 (116)
                      ++||+|||++......    ....| ..+..|+.   ..++.++|+||+|+++|++..+..|....   +....+..+..
T Consensus       154 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~  233 (292)
T cd06657         154 RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP  233 (292)
T ss_pred             CEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC
Confidence            5899999987532110    00111 12445654   23567899999999999999887775431   22333333222


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .....  ....+.++.+++.+||..+|.+||++.+++.
T Consensus       234 ~~~~~--~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         234 PKLKN--LHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             cccCC--cccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            11111  1246788999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.35  E-value=1.6e-12  Score=82.83  Aligned_cols=107  Identities=11%  Similarity=-0.018  Sum_probs=64.4

Q ss_pred             eeecCCCCCCHHHHHHH---H---hcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES---V---RKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~---~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||++.......   .   .....+.+|+.    ..++.++|||+||+++|++..+..|...   ......+...
T Consensus       138 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~  217 (287)
T cd07840         138 VLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFEL  217 (287)
T ss_pred             CEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            58999999886321110   0   01123456774    2357789999999999999888666432   1111111110


Q ss_pred             CC----CCCC---------------CCC-------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 EK----CLRP---------------SLS-------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~~----~~~p---------------~~~-------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..    ...+               ..+       ...++.++.+++.+||..+|++||++.+++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         218 CGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             hCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            00    0000               000       0013678899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.35  E-value=9.8e-13  Score=83.69  Aligned_cols=107  Identities=12%  Similarity=-0.023  Sum_probs=63.6

Q ss_pred             eeecCCCCCCHHHHHH----HHhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .+||+|||++..-...    .......+.+|+.    ..++.++|+||+|+++|++..+..|.-.   .+....+.....
T Consensus       137 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~  216 (282)
T cd07831         137 ILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLG  216 (282)
T ss_pred             CeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcC
Confidence            5899999998532100    0001123456763    2246789999999999998876544321   111111111000


Q ss_pred             -----------------CCCCCC-C------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 -----------------CLRPSL-S------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 -----------------~~~p~~-~------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                       ..-|.. .      ....+.++.+++.+||..+|++||++.+++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         217 TPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             CCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence                             000000 0      0135688999999999999999999999864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.35  E-value=6.1e-13  Score=84.62  Aligned_cols=107  Identities=10%  Similarity=-0.015  Sum_probs=63.4

Q ss_pred             eeecCCCCCCHHHHHHH--H--hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES--V--RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~--~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      .+||+|||.+.......  .  ..+ ..+..|+.    ..++.++|+||+|+++|++.++..|...    .++.......
T Consensus       136 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~  215 (283)
T cd05118         136 VLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTL  215 (283)
T ss_pred             cEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence            58999999874221100  0  011 12445654    1357789999999999999887655321    1111111110


Q ss_pred             CC---CC-------------------CCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 EK---CL-------------------RPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~~---~~-------------------~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..   ..                   .....  ...++.++.+++.+||..+|.+||++.+++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         216 GTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             CCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            00   00                   00000  0136678999999999999999999999864

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.35  E-value=9.4e-13  Score=86.15  Aligned_cols=108  Identities=15%  Similarity=0.037  Sum_probs=64.6

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHH------
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVE------   63 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~------   63 (116)
                      ++||+|||++......     .......+.+|+.    ..++.++|+||||+++|++..+..|.-..   ....      
T Consensus       146 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  225 (337)
T cd07858         146 DLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELL  225 (337)
T ss_pred             CEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHh
Confidence            5899999998632111     0001123455663    23567899999999999988776553110   0000      


Q ss_pred             ------------------HHhcCCCCCCCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy12612         64 ------------------SVRKGEKCLRPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKAA  109 (116)
Q Consensus        64 ------------------~l~~~~~~~~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~  109 (116)
                                        .+........+.+.  ...++.++.+++.+||..+|.+||++.+++..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         226 GSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             CCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence                              00000000111110  02467888999999999999999999998753

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.35  E-value=1.2e-12  Score=84.49  Aligned_cols=107  Identities=11%  Similarity=0.067  Sum_probs=63.9

Q ss_pred             eeecCCCCCCHHHHHH--HH--hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc-
Q psy12612          2 RVELSDLRILRDEIVE--SV--RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK-   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~--~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~-   67 (116)
                      ++||+|||++......  ..  ..+ ..+.+||.    ..++.++||||+|+++|++..+..|...    .+.+..+.. 
T Consensus       141 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  220 (303)
T cd07869         141 ELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLV  220 (303)
T ss_pred             CEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHH
Confidence            5899999998532110  00  011 23567774    2367789999999999999888776432    111111110 


Q ss_pred             -CC--CCCC------CCC-----------------CccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 -GE--KCLR------PSL-----------------SELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 -~~--~~~~------p~~-----------------~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       +.  ....      +.+                 .....+.++.+|+.+|+..||.+|||..+++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         221 LGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             hCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence             00  0000      000                 00012356789999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.35  E-value=6.6e-13  Score=86.49  Aligned_cols=97  Identities=15%  Similarity=0.219  Sum_probs=66.1

Q ss_pred             eeecCCCCCCHHHHHH----HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE----SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++.....    ....| ..+.+||.   ..++.++|+||+|+++|++..+..|...   .++...+..+..
T Consensus       139 ~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~  218 (323)
T cd05615         139 HIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV  218 (323)
T ss_pred             CEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            5899999998642111    00112 23566765   3367889999999999999988777543   234444443332


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                       ..|.    .++.++.+++.+|+..+|.+|++.
T Consensus       219 -~~p~----~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         219 -SYPK----SLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             -CCCc----cCCHHHHHHHHHHcccCHhhCCCC
Confidence             2233    577889999999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.34  E-value=6.3e-13  Score=87.77  Aligned_cols=107  Identities=8%  Similarity=-0.037  Sum_probs=64.2

Q ss_pred             eeecCCCCCCHHHHHHHHh---cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESVR---KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~---~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||+++........   .| ..+.+||.   ..++.++||||||+++|++..+..|...   .+....+......
T Consensus       164 ~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~  243 (364)
T cd07875         164 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT  243 (364)
T ss_pred             cEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            5899999998632111000   11 23556765   3467899999999999999888766422   0111111110000


Q ss_pred             ------------------CCCCCC-------------------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 ------------------LRPSLS-------------------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ------------------~~p~~~-------------------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                        .+|...                   ......++.+|+.+|+..||.+|||..+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~  317 (364)
T cd07875         244 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  317 (364)
T ss_pred             CCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                              001000                   0012356789999999999999999999865

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0584|consensus

Probab=99.34  E-value=4.6e-13  Score=91.51  Aligned_cols=103  Identities=21%  Similarity=0.218  Sum_probs=76.1

Q ss_pred             eeecCCCCCCHHHHHHHHh--cCC-CCCCCCc--CcccCHHHHHHHHHHhcccCCCCCCCC----hHHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVESVR--KGE-KCLRPNL--SELTCEEEVTAIMKRCWNEDPSERPDF----TTEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~--~g~-~~~~p~~--~~~~~~~dv~s~g~~~we~~~~~~p~~----~~~~~~~l~~~~~~~   72 (116)
                      .|||+|.||+...-.....  -|. ..++||.  ..|+-..||||||+++.|+.+.+.|+-    ..++...+..|..+.
T Consensus       184 ~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~  263 (632)
T KOG0584|consen  184 EVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPA  263 (632)
T ss_pred             ceeecchhHHHHhhccccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHH
Confidence            5999999998632111111  133 3567776  458889999999999999999998853    248999999998532


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      --  .. --.+++.++|.+|... .++|++..+++.
T Consensus       264 sl--~k-V~dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  264 AL--SK-VKDPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             Hh--hc-cCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence            21  11 2357899999999998 999999999864

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.34  E-value=1.8e-12  Score=88.19  Aligned_cols=107  Identities=14%  Similarity=0.157  Sum_probs=63.8

Q ss_pred             eeecCCCCCCHHHHHH---HH---hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCC-----------ChHH
Q psy12612          2 RVELSDLRILRDEIVE---SV---RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPD-----------FTTE   60 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~---~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~-----------~~~~   60 (116)
                      ++||+|||+++.....   ..   ..| ..+.+||.   ..++.++||||||+++||+..+..+.           +..+
T Consensus       298 ~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~  377 (461)
T PHA03211        298 DICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQ  377 (461)
T ss_pred             CEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHH
Confidence            5899999998531100   00   112 23566765   34678999999999999964332221           1123


Q ss_pred             HHHHHhcCCCC-----------------------CCCCCCc------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         61 IVESVRKGEKC-----------------------LRPSLSE------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        61 ~~~~l~~~~~~-----------------------~~p~~~~------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +...+..+...                       .+|....      ...+.++.+|+.+|+..||.+||++.+++.
T Consensus       378 l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~  454 (461)
T PHA03211        378 ILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR  454 (461)
T ss_pred             HHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence            44433332210                       0110000      023357889999999999999999999975

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.34  E-value=1.5e-12  Score=83.13  Aligned_cols=107  Identities=19%  Similarity=0.098  Sum_probs=63.7

Q ss_pred             eeecCCCCCCHHHHHHH--H----hcCCCCCCCCc---C-cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc-
Q psy12612          2 RVELSDLRILRDEIVES--V----RKGEKCLRPNL---S-ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK-   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~----~~g~~~~~p~~---~-~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~-   67 (116)
                      .+||+|||++..-....  .    .....+.+||.   . .++.++|+||||+++|++..+..|...   .+....+.. 
T Consensus       138 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~  217 (288)
T cd07833         138 VLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKC  217 (288)
T ss_pred             CEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            58999999875321110  0    00112456664   2 457789999999999999887655321   011111100 


Q ss_pred             -------------------CCCCCCCCCC-------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 -------------------GEKCLRPSLS-------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 -------------------~~~~~~p~~~-------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                         +.....+..+       +..++.++.+++.+||..+|++||++++|+.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         218 LGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             hCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence                               0000000000       0124788999999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.34  E-value=3.9e-13  Score=85.71  Aligned_cols=107  Identities=18%  Similarity=0.108  Sum_probs=62.8

Q ss_pred             eeecCCCCCCHHHHHH-HH----hcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc-C
Q psy12612          2 RVELSDLRILRDEIVE-SV----RKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK-G   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~----~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~-~   68 (116)
                      ++||+|||++..-... ..    .....+.+|+.    ..++.++||||||+++|++..+..|...   .+....+.. .
T Consensus       138 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~  217 (286)
T cd07846         138 VVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCL  217 (286)
T ss_pred             cEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHh
Confidence            5899999987531110 00    01112446664    2246789999999999999887544321   011111100 0


Q ss_pred             C-----------------CCCCCCCC--------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 E-----------------KCLRPSLS--------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~-----------------~~~~p~~~--------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .                 ....|...        ...++..+.+++.+||..+|++||++.+|+.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         218 GNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             CCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            0                 00001000        0146778999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.34  E-value=7.3e-13  Score=84.42  Aligned_cols=107  Identities=13%  Similarity=0.046  Sum_probs=64.6

Q ss_pred             eeecCCCCCCHHHHHHH---H-hc-CCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES---V-RK-GEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~-~~-g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      .+||+|||++.......   . .. ...+.+||.    ..++.++|+||||+++|++..+..|...    .+....+...
T Consensus       137 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~  216 (283)
T cd07835         137 ALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTL  216 (283)
T ss_pred             cEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            58999999985311100   0 00 123566774    1357789999999999999887765421    1111111110


Q ss_pred             CC---------------------CCCCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 EK---------------------CLRPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~~---------------------~~~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..                     ...+...  ....+.++.+++.+||+.+|.+||++++++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         217 GTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             CCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            00                     0000000  0135578899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.34  E-value=1.4e-12  Score=83.43  Aligned_cols=105  Identities=14%  Similarity=0.157  Sum_probs=67.1

Q ss_pred             eeecCCCCCCHHHHHHH------HhcCCCCCCCCcC-----cccCHHHHHHHHHHhcccCCCCCCCCh-------HHHHH
Q psy12612          2 RVELSDLRILRDEIVES------VRKGEKCLRPNLS-----ELTCEEEVTAIMKRCWNEDPSERPDFT-------TEIVE   63 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~------~~~g~~~~~p~~~-----~~~~~~dv~s~g~~~we~~~~~~p~~~-------~~~~~   63 (116)
                      ++||+|||+++.-....      ......+.+|+..     ..+.++|+|+||+++|++..+..|...       .++..
T Consensus       143 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~  222 (288)
T cd05583         143 HVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR  222 (288)
T ss_pred             CEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHH
Confidence            58999999875321110      0111234455531     135689999999999999887766421       12222


Q ss_pred             HHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         64 SVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        64 ~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      .+..... ..|.    .++.++.+++.+||+.+|++||++.++...|+
T Consensus       223 ~~~~~~~-~~~~----~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~  265 (288)
T cd05583         223 RILKSKP-PFPK----TMSAEARDFIQKLLEKDPKKRLGANGADEIKN  265 (288)
T ss_pred             HHHccCC-CCCc----ccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence            3322221 1222    47788999999999999999999887766554

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.34  E-value=8.7e-13  Score=83.77  Aligned_cols=103  Identities=13%  Similarity=0.099  Sum_probs=66.2

Q ss_pred             eeecCCCCCCHHHHHHHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHH-HHHHh-cCCC-C
Q psy12612          2 RVELSDLRILRDEIVESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEI-VESVR-KGEK-C   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~-~~~l~-~~~~-~   71 (116)
                      ++||+|||++..........+ ..+.+|+.   ..++.++|+||+|+++|++..+..|...   ..+ ...+. .... .
T Consensus       148 ~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  227 (267)
T PHA03390        148 RIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKL  227 (267)
T ss_pred             eEEEecCccceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccC
Confidence            689999998753211111112 23556765   2457789999999999999888777432   111 11111 1111 1


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCC-HHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPD-FTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~-~~~i~~  108 (116)
                      ..+.    ..+..+.+++.+||+.+|.+||+ +++++.
T Consensus       228 ~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        228 PFIK----NVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             Cccc----ccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            1221    57889999999999999999995 688863

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.34  E-value=1.5e-12  Score=83.22  Aligned_cols=107  Identities=11%  Similarity=0.005  Sum_probs=63.7

Q ss_pred             eeecCCCCCCHHHHHHHH----hcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc--C-
Q psy12612          2 RVELSDLRILRDEIVESV----RKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK--G-   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~--~-   68 (116)
                      ++||+|||+++.-.....    .....+.+||.   ..++.++||||+|+++|++..+..|...   ......+..  + 
T Consensus       146 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~  225 (288)
T cd07863         146 QVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL  225 (288)
T ss_pred             CEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCC
Confidence            589999999863211100    01123566775   3467889999999999998766544221   111111110  0 


Q ss_pred             -CC--------------CCCCCCC----ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 -EK--------------CLRPSLS----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 -~~--------------~~~p~~~----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       ..              ......+    ...++..+.+++.+|+..||++||++.+++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         226 PPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             CChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence             00              0000000    0135677899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=4.6e-13  Score=87.80  Aligned_cols=81  Identities=15%  Similarity=0.161  Sum_probs=56.4

Q ss_pred             CCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC-CCCCCCCccchHHHHHHHHHHhccCCC
Q psy12612         25 CLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDP   97 (116)
Q Consensus        25 ~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p   97 (116)
                      +.+||.   ..++.++||||||+++|++..+..|...   .+....+..... ...|..  ..+++++.+++.+|+. +|
T Consensus       196 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~--~~~~~~~~~li~~ll~-dp  272 (350)
T cd05573         196 YIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPD--PPVSPEAIDLICRLLC-DP  272 (350)
T ss_pred             ccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCC--CCCCHHHHHHHHHHcc-Ch
Confidence            455664   2367889999999999999998888543   133333433111 122221  1368899999999997 99


Q ss_pred             CCCCC-HHHHHH
Q psy12612         98 SERPD-FTTLKA  108 (116)
Q Consensus        98 ~~Rp~-~~~i~~  108 (116)
                      .+||+ +.+++.
T Consensus       273 ~~R~~s~~~ll~  284 (350)
T cd05573         273 EDRLGSFEEIKS  284 (350)
T ss_pred             hhcCCCHHHHhc
Confidence            99999 999865

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.33  E-value=1.9e-12  Score=83.67  Aligned_cols=107  Identities=9%  Similarity=0.038  Sum_probs=65.6

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEIVES-----VRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~   69 (116)
                      .+||+|||+++......     ......+.+||.    ..++.++||||+|+++|++.++..|...   .+....+....
T Consensus       142 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~  221 (309)
T cd07872         142 ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLL  221 (309)
T ss_pred             CEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence            58999999985321100     001123556764    2367899999999999999988766422   11111111100


Q ss_pred             C------------------CCCCCC------C-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 K------------------CLRPSL------S-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~------------------~~~p~~------~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .                  ...|..      . ...++.++.+|+.+|+..||.+||++.+++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         222 GTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             CCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            0                  000000      0 0135678899999999999999999999865

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.33  E-value=1.6e-12  Score=81.37  Aligned_cols=104  Identities=17%  Similarity=0.242  Sum_probs=67.3

Q ss_pred             eeecCCCCCCHHHHHHH-------HhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES-------VRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-------~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      .+||+|||++.......       ......+..|+.   ..++.++|+|+||+++|++..+..|...    ......+..
T Consensus       139 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  218 (260)
T cd06606         139 VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS  218 (260)
T ss_pred             CEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc
Confidence            57999999875321111       011123445664   2257789999999999999887777432    122222222


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +.  ..+.++. ..+..+.+++.+||..+|++||++.+++.
T Consensus       219 ~~--~~~~~~~-~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         219 SG--EPPEIPE-HLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             cC--CCcCCCc-ccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            11  1222222 57889999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.33  E-value=3.6e-13  Score=89.20  Aligned_cols=107  Identities=13%  Similarity=0.074  Sum_probs=64.8

Q ss_pred             eeecCCCCCCHHHHHHH---Hh--cC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc-
Q psy12612          2 RVELSDLRILRDEIVES---VR--KG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK-   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~--~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~-   67 (116)
                      ++||+|||+++......   ..  .+ ..+.+||.    ..++.++||||+|+++|++..+..|...   .+....+.. 
T Consensus       141 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  220 (372)
T cd07853         141 VLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDL  220 (372)
T ss_pred             CEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence            68999999986321110   00  01 12456664    2357889999999999999887665321   111111110 


Q ss_pred             ---------------------CCCCCCCCCC-----ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 ---------------------GEKCLRPSLS-----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ---------------------~~~~~~p~~~-----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                           ......|...     ....+.++.+|+.+|+..||.+||++.+++.
T Consensus       221 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         221 LGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             cCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence                                 0000011100     0135678899999999999999999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.33  E-value=1e-12  Score=86.20  Aligned_cols=107  Identities=8%  Similarity=0.007  Sum_probs=64.7

Q ss_pred             eeecCCCCCCHHHHHHHH-hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVESV-RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~~~   72 (116)
                      ++||+|||+++....... ..+ ..+.+|+.    ..++.++|+||||+++|++..+..|....   .....+.......
T Consensus       155 ~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~  234 (342)
T cd07879         155 ELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP  234 (342)
T ss_pred             CEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            589999999863210000 001 12456764    23577899999999999998877664321   1111111110000


Q ss_pred             -------------------CCCCCc-------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 -------------------RPSLSE-------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 -------------------~p~~~~-------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                         .|..+.       ...+.++.+++.+||..||.+||++.+++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~  296 (342)
T cd07879         235 GPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE  296 (342)
T ss_pred             CHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                               000000       135567889999999999999999999974

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.33  E-value=2.1e-12  Score=81.65  Aligned_cols=104  Identities=13%  Similarity=0.199  Sum_probs=65.7

Q ss_pred             eeecCCCCCCHHHHHHH---------HhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------HHHHH
Q psy12612          2 RVELSDLRILRDEIVES---------VRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------TEIVE   63 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---------~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------~~~~~   63 (116)
                      .+||+|||++.......         ......+.+|+.   ..++.++|+|++|+++|++..+..|...      .....
T Consensus       142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  221 (268)
T cd06630         142 RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIF  221 (268)
T ss_pred             EEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHH
Confidence            47999999975321110         001113445654   2356789999999999999887766432      01111


Q ss_pred             HHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         64 SVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        64 ~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .+....  ..+.++. ..+.++.+++.+||..+|++||++.+++.
T Consensus       222 ~~~~~~--~~~~~~~-~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         222 KIASAT--TAPSIPE-HLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             HHhccC--CCCCCch-hhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            111111  1222222 56788999999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG0597|consensus

Probab=99.33  E-value=1e-12  Score=89.69  Aligned_cols=105  Identities=17%  Similarity=0.242  Sum_probs=76.9

Q ss_pred             CeeecCCCCCCHHHHHHHH----hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCC-C
Q psy12612          1 MRVELSDLRILRDEIVESV----RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEK-C   71 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~~~~~----~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~-~   71 (116)
                      +.+|+||||+++....+..    -+|. .+++||+   ..|+..+|+||+|.++||+..++-|++...+...++.... +
T Consensus       137 ~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~  216 (808)
T KOG0597|consen  137 GTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDP  216 (808)
T ss_pred             CceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCC
Confidence            4789999999985432211    1233 4778886   4589999999999999999999888876555555544332 2


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .+|+   .....++.++++.-+..||.+|-+-.+++.
T Consensus       217 v~~p---~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  217 VKPP---STASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             CCCc---ccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence            2222   267788999999999999999999877653

>KOG0595|consensus

Probab=99.32  E-value=2.7e-12  Score=84.19  Aligned_cols=104  Identities=13%  Similarity=0.257  Sum_probs=72.4

Q ss_pred             eeecCCCCCCHH----HHHHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRD----EIVESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~----~~~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      .+||+|||+++.    .....+++..-+++||+   ..|+.++|+||+|+++|+...+.-|.-.   .++...++++...
T Consensus       153 ~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~  232 (429)
T KOG0595|consen  153 VLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEI  232 (429)
T ss_pred             eEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccc
Confidence            589999999974    22233333345789997   4699999999999999999888766432   4666677766642


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                       .|.++. .+..+..+|+..-...++.+|-+|.+-.
T Consensus       233 -~~~~~~-~~s~~~~~Ll~~ll~~~~~~~~~~~~~~  266 (429)
T KOG0595|consen  233 -VPVLPA-ELSNPLRELLISLLQRNPKDRISFEDFF  266 (429)
T ss_pred             -cCchhh-hccCchhhhhhHHHhcCccccCchHHhh
Confidence             222222 4555666777777788888888886543

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.32  E-value=1.7e-12  Score=82.87  Aligned_cols=106  Identities=13%  Similarity=0.142  Sum_probs=65.5

Q ss_pred             eeecCCCCCCHHHHHHH--HhcCC-CCCCCCcC----cccCHHHHHHHHHHhcccCCCCCCCChH--HHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVES--VRKGE-KCLRPNLS----ELTCEEEVTAIMKRCWNEDPSERPDFTT--EIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g~-~~~~p~~~----~~~~~~dv~s~g~~~we~~~~~~p~~~~--~~~~~l~~~~~~~   72 (116)
                      .+||+|||++.......  ...|. .+.+|+..    .++.++|+||+|+++|++..+..|....  .....+.......
T Consensus       135 ~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~  214 (279)
T cd05633         135 HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTV  214 (279)
T ss_pred             CEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcC
Confidence            47999999985321100  01122 34566641    2577899999999999998877764320  0111111111111


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      .+.++. .++.++.+++.+||..||.+||     +++++..
T Consensus       215 ~~~~~~-~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~  254 (279)
T cd05633         215 NVELPD-SFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE  254 (279)
T ss_pred             CcCCcc-ccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence            122222 5788999999999999999999     5777754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.32  E-value=3.6e-12  Score=81.29  Aligned_cols=107  Identities=11%  Similarity=0.009  Sum_probs=63.7

Q ss_pred             eeecCCCCCCHHHHHHH--Hh--c-CCCCCCCCcC----cccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES--VR--K-GEKCLRPNLS----ELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~--~-g~~~~~p~~~----~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      .+||+|||++.......  ..  . ...+.+||..    .++.++|+||||+++|++.++..|...    ..+...+...
T Consensus       138 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~  217 (284)
T cd07860         138 AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL  217 (284)
T ss_pred             CEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHh
Confidence            58999999875321100  00  0 1134567641    246789999999999999888766321    1111111111


Q ss_pred             CCCC----------------CCCCC-------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 EKCL----------------RPSLS-------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~~~~----------------~p~~~-------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ....                -+...       ...++.++.+++.+||..||++||++.+++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         218 GTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             CCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            0000                00000       0135677889999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.32  E-value=1.8e-12  Score=81.15  Aligned_cols=99  Identities=15%  Similarity=0.192  Sum_probs=64.8

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++......     .......+..|+.   ...+.++|+|+||+++|++..+..|...   .++...+..+ .
T Consensus       131 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-~  209 (250)
T cd05123         131 HIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD-P  209 (250)
T ss_pred             cEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC-C
Confidence            5899999998642211     0011123445654   1246789999999999999887776432   1333344332 2


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTT  105 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~  105 (116)
                      ...|.    ..+.++.+++++||..+|++||++.+
T Consensus       210 ~~~~~----~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         210 LRFPE----FLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             CCCCC----CCCHHHHHHHHHHhcCCHhhCCCccc
Confidence            22232    56788999999999999999999943

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0598|consensus

Probab=99.32  E-value=1.3e-12  Score=84.50  Aligned_cols=96  Identities=15%  Similarity=0.308  Sum_probs=73.0

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      +|||+||||++.....     .......+++||+   ..|+..+|.||+|+++||+..+..|+..   .++.+.+.++..
T Consensus       163 Hi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~  242 (357)
T KOG0598|consen  163 HIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL  242 (357)
T ss_pred             cEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC
Confidence            6899999999854322     1112235889987   4588999999999999999999888665   356667776664


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCC
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERP  101 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp  101 (116)
                      ...|.    ..+.+..+++..-...+|++|-
T Consensus       243 ~~~p~----~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  243 PLPPG----YLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             CCCCc----cCCHHHHHHHHHHhccCHHHhc
Confidence            44443    4778889999999999999994

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.31  E-value=1.7e-12  Score=81.28  Aligned_cols=103  Identities=16%  Similarity=0.220  Sum_probs=65.9

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES-----VRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .+||+|||++.......     ......+.+|+.   ..++.++|+|++|+++|++..+..|...   ............
T Consensus       137 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  216 (254)
T cd06627         137 VVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH  216 (254)
T ss_pred             CEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC
Confidence            58999999875321100     011112445553   1246789999999999999887766432   112222222222


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...|.    .++..+.+++.+||..+|++||+..+++.
T Consensus       217 ~~~~~----~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         217 PPLPE----GISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             CCCCC----CCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            22222    57889999999999999999999998864

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.31  E-value=9.2e-13  Score=85.66  Aligned_cols=97  Identities=9%  Similarity=0.117  Sum_probs=65.5

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++.....     .......+.+||.   ..++.++||||||+++|++..+..|...   .++...+..+. 
T Consensus       134 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~-  212 (321)
T cd05603         134 HVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP-  212 (321)
T ss_pred             CEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC-
Confidence            5899999998632110     0111123566765   2467789999999999999988877543   23444444332 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                      ...|.    ..+.++.+++.+|++.+|.+|++.
T Consensus       213 ~~~~~----~~~~~~~~li~~~l~~~p~~R~~~  241 (321)
T cd05603         213 LQLPG----GKTVAACDLLVGLLHKDQRRRLGA  241 (321)
T ss_pred             CCCCC----CCCHHHHHHHHHHccCCHhhcCCC
Confidence            22222    567789999999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.31  E-value=2.7e-12  Score=81.80  Aligned_cols=107  Identities=13%  Similarity=-0.018  Sum_probs=61.9

Q ss_pred             eeecCCCCCCHHHHHH----HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcC---
Q psy12612          2 RVELSDLRILRDEIVE----SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKG---   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~---   68 (116)
                      ++||+|||++......    .......+.+|+.   ..++.++|+||||+++|++..+..|...   .+....+...   
T Consensus       145 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~  224 (287)
T cd07838         145 QVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGL  224 (287)
T ss_pred             CEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCC
Confidence            5899999987532110    0001112445664   2356789999999999998876443221   1111111110   


Q ss_pred             -CC--------------CCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 -EK--------------CLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 -~~--------------~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       ..              ...+....    ...+..+.+++.+||..+|++||++.+++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         225 PSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             CChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence             00              00000000    124467789999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=4.9e-12  Score=80.01  Aligned_cols=102  Identities=15%  Similarity=0.193  Sum_probs=65.1

Q ss_pred             eeecCCCCCCHHHHH--------HHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV--------ESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--------~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~   66 (116)
                      .+||+|||+++....        ........+.+|+.   ..++.++|+||||+++|++..+..|...    ..+.....
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  223 (264)
T cd06653         144 NVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT  223 (264)
T ss_pred             CEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc
Confidence            479999999863210        00011123456664   2346789999999999999988777432    12222221


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...   ++.++. ..+.++.+++.+||. ++..||+..++..
T Consensus       224 ~~~---~~~~p~-~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         224 QPT---KPMLPD-GVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             CCC---CCCCCc-ccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            222   222222 677889999999998 5799999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.30  E-value=4.5e-12  Score=82.04  Aligned_cols=55  Identities=22%  Similarity=-0.001  Sum_probs=36.7

Q ss_pred             eeecCCCCCCHHHHH--H---H---HhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCC
Q psy12612          2 RVELSDLRILRDEIV--E---S---VRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPD   56 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~---~---~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~   56 (116)
                      ++||+|||+++.-..  .   .   ......+.+||.    ..++.++||||||+++|++.++..|.
T Consensus       150 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f  216 (317)
T cd07867         150 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF  216 (317)
T ss_pred             cEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCc
Confidence            589999999863110  0   0   001123567774    23678899999999999998876553

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.30  E-value=2.5e-12  Score=84.10  Aligned_cols=107  Identities=8%  Similarity=-0.005  Sum_probs=63.4

Q ss_pred             eeecCCCCCCHHHHHHHH--------hcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHh
Q psy12612          2 RVELSDLRILRDEIVESV--------RKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--------~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~   66 (116)
                      ++||+|||+++.......        .....+.+|+.    ..++.++||||+|+++|++..+..|....   .....+.
T Consensus       144 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~  223 (336)
T cd07849         144 DLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLIL  223 (336)
T ss_pred             CEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            589999999863211000        00112456764    23577899999999999988876553210   0000000


Q ss_pred             cCC----------------------CCCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGE----------------------KCLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~----------------------~~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...                      ....+..+.    ...+.++.++|.+||+.+|++||++.+++.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~  291 (336)
T cd07849         224 GVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA  291 (336)
T ss_pred             HHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            000                      000111110    124567899999999999999999999875

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=3.7e-12  Score=82.52  Aligned_cols=73  Identities=14%  Similarity=0.106  Sum_probs=49.9

Q ss_pred             ccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCC----HHH
Q psy12612         33 LTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPD----FTT  105 (116)
Q Consensus        33 ~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~----~~~  105 (116)
                      ++.++||||||+++|++..+..|...   ......+.... ...|.  ....+.++.+++.+||..+|++||+    ..+
T Consensus       209 ~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~  285 (316)
T cd05574         209 HGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKE-VTFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAE  285 (316)
T ss_pred             CCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCC-ccCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHH
Confidence            46689999999999999988877532   12222222111 11111  1136789999999999999999999    666


Q ss_pred             HHH
Q psy12612        106 LKA  108 (116)
Q Consensus       106 i~~  108 (116)
                      ++.
T Consensus       286 ll~  288 (316)
T cd05574         286 IKQ  288 (316)
T ss_pred             HHc
Confidence            654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.30  E-value=4.5e-12  Score=81.63  Aligned_cols=107  Identities=7%  Similarity=0.035  Sum_probs=64.7

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEIVES-----VRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~   69 (116)
                      ++||+|||++.......     ......+.+|+.    ..++.++||||+|+++|++..+..|...   .+....+....
T Consensus       142 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~  221 (301)
T cd07873         142 ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRIL  221 (301)
T ss_pred             cEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence            58999999986421100     001123456664    2256789999999999999887655322   11111111000


Q ss_pred             ------------------CCCCCCCC-------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 ------------------KCLRPSLS-------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ------------------~~~~p~~~-------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                        ....|...       ...++.++.+|+.+|+..||.+|||..+++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         222 GTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             CCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence                              00011100       0146778899999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.29  E-value=4.2e-12  Score=82.69  Aligned_cols=107  Identities=11%  Similarity=0.005  Sum_probs=64.4

Q ss_pred             eeecCCCCCCHHHHHHH-----Hh--cC-CCCCCCCc---C-cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVES-----VR--KG-EKCLRPNL---S-ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~--~g-~~~~~p~~---~-~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||++.......     ..  .+ ..+.+|+.   . .++.++|+||+|+++|++..+..|...   .+....+.
T Consensus       141 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~  220 (330)
T cd07834         141 DLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIV  220 (330)
T ss_pred             CEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHH
Confidence            68999999875321110     00  01 12455664   1 457789999999999998877655321   11111111


Q ss_pred             cCCC----------------------CCCCCCC----ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEK----------------------CLRPSLS----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~----------------------~~~p~~~----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ....                      ......+    ....+.++.+++.+||+.+|.+||++.+++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  288 (330)
T cd07834         221 EVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA  288 (330)
T ss_pred             HhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            1000                      0000000    0135678899999999999999999999876

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.29  E-value=2.6e-12  Score=82.33  Aligned_cols=107  Identities=12%  Similarity=0.048  Sum_probs=63.5

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcCCCCCCCCcC----cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcC-
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKGEKCLRPNLS----ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKG-   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g~~~~~p~~~----~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~-   68 (116)
                      .+||+|||++..-...     .......+.+|+..    .++.++|+||+|+++|++..+..|...   .+....+... 
T Consensus       144 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~  223 (293)
T cd07843         144 ILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLL  223 (293)
T ss_pred             cEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence            4899999987532110     00111235567641    246789999999999999887655321   1111111000 


Q ss_pred             --------------------C------CCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 --------------------E------KCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 --------------------~------~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                          .      ......++....+..+.+++++||+.+|++||++.+++.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         224 GTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             CCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence                                0      000011111114677899999999999999999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.29  E-value=4.6e-12  Score=80.74  Aligned_cols=106  Identities=15%  Similarity=0.045  Sum_probs=63.6

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHH-Hh
Q psy12612          2 RVELSDLRILRDEIVES-----VRKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVES-VR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~-l~   66 (116)
                      .+||+|||++.......     ...| ..+.+||.    ..++.++||||+|+++|++..+ .|.+.    ...... +.
T Consensus       137 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg-~~~~~~~~~~~~~~~~~~  215 (286)
T cd07832         137 VLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNG-SPLFPGENDIEQLAIVFR  215 (286)
T ss_pred             cEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcC-CcCcCCCCHHHHHHHHHH
Confidence            57999999875321110     0011 23556764    1247789999999999999887 44432    111111 11


Q ss_pred             cCCC--------------------CCCCCCC----ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEK--------------------CLRPSLS----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~--------------------~~~p~~~----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ....                    ...+..+    ..+.+.++.+++++|+..+|.+||++++++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         216 TLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             HcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            1000                    0000000    0135688899999999999999999999864

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.29  E-value=4.9e-12  Score=81.96  Aligned_cols=55  Identities=22%  Similarity=-0.008  Sum_probs=36.6

Q ss_pred             eeecCCCCCCHHHHH-----HH---HhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCC
Q psy12612          2 RVELSDLRILRDEIV-----ES---VRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPD   56 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~~---~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~   56 (116)
                      ++||+|||+++.-..     ..   ......+.+||.    ..++.++||||+|+++|++..+..|.
T Consensus       150 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f  216 (317)
T cd07868         150 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF  216 (317)
T ss_pred             cEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCc
Confidence            589999999853110     00   001123567774    23678899999999999988876553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.29  E-value=1.8e-12  Score=93.44  Aligned_cols=88  Identities=14%  Similarity=0.123  Sum_probs=57.3

Q ss_pred             CCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCCC-CC-CccchHHHHHHHHHHhccCCCCC
Q psy12612         25 CLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRP-SL-SELTCEEEVTAIMKRCWNEDPSE   99 (116)
Q Consensus        25 ~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~p-~~-~~~~~~~~l~~l~~~Cw~~~p~~   99 (116)
                      +.+||.   ..++.++||||+|+++|++.++..|..... ...+........| .. +...++..+.+++.+|+..||++
T Consensus       197 YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~-~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~k  275 (932)
T PRK13184        197 YMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKK-GRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAE  275 (932)
T ss_pred             CCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcc-hhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhh
Confidence            456664   236789999999999999998887754211 1111111111111 11 11257888999999999999999


Q ss_pred             CC-CHHHHHHHHHHh
Q psy12612        100 RP-DFTTLKAAIRKL  113 (116)
Q Consensus       100 Rp-~~~~i~~~l~~~  113 (116)
                      |+ +++++...|+.+
T Consensus       276 R~ss~eeLl~~Le~~  290 (932)
T PRK13184        276 RYSSVQELKQDLEPH  290 (932)
T ss_pred             CcCHHHHHHHHHHHH
Confidence            96 467777777655

>KOG0984|consensus

Probab=99.29  E-value=2.2e-12  Score=78.53  Aligned_cols=55  Identities=16%  Similarity=0.241  Sum_probs=41.7

Q ss_pred             eeecCCCCCCH---HHHHHHHhcC-CCCCCCCc-------CcccCHHHHHHHHHHhcccCCCCCCC
Q psy12612          2 RVELSDLRILR---DEIVESVRKG-EKCLRPNL-------SELTCEEEVTAIMKRCWNEDPSERPD   56 (116)
Q Consensus         2 ~vKi~Dfgls~---~~~~~~~~~g-~~~~~p~~-------~~~~~~~dv~s~g~~~we~~~~~~p~   56 (116)
                      +|||||||.|-   +.+...+..| ..+++||.       ..|+.+|||||+|+++.|+.....|.
T Consensus       187 qVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY  252 (282)
T KOG0984|consen  187 QVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPY  252 (282)
T ss_pred             cEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccc
Confidence            79999999985   2344455555 35667764       24899999999999999998887773

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.29  E-value=3.7e-12  Score=81.32  Aligned_cols=103  Identities=13%  Similarity=0.130  Sum_probs=66.8

Q ss_pred             eeecCCCCCCHHHHH--HHHhcC-CCCCCCCcC----cccCHHHHHHHHHHhcccCCCCCCCChH-----HHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEIV--ESVRKG-EKCLRPNLS----ELTCEEEVTAIMKRCWNEDPSERPDFTT-----EIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~~g-~~~~~p~~~----~~~~~~dv~s~g~~~we~~~~~~p~~~~-----~~~~~l~~~~   69 (116)
                      ++||+|||++.....  .....| ..+.+||..    .++.++|+||+|+++|++..+..|....     ..........
T Consensus       135 ~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~  214 (278)
T cd05606         135 HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM  214 (278)
T ss_pred             CEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc
Confidence            589999999853210  001112 235567651    3677899999999999998887775321     1111111122


Q ss_pred             CCCCCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         70 KCLRPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        70 ~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      ....|.    .++.++.+++.+|+..+|.+||     +..++..
T Consensus       215 ~~~~~~----~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         215 AVELPD----SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             CCCCCC----cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            222222    4678999999999999999999     8888764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.29  E-value=5.9e-12  Score=80.20  Aligned_cols=103  Identities=14%  Similarity=0.136  Sum_probs=62.5

Q ss_pred             eeecCCCCCCHHHHHHHH---hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESV---RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~~   71 (116)
                      .+||+|||++........   ..+ ..+.+|+.   ..++.++|+||+|+++|++..+..|....   .....+......
T Consensus       133 ~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  212 (277)
T cd05577         133 NVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE  212 (277)
T ss_pred             CEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc
Confidence            589999998863211000   011 13455664   23567899999999999998877764320   011122221111


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTT  105 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~  105 (116)
                      .....+. ..++++.+++.+||..+|.+||++.+
T Consensus       213 ~~~~~~~-~~~~~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         213 MAVEYPD-KFSPEAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             ccccCCc-cCCHHHHHHHHHHccCChhHccCCCc
Confidence            1111111 57889999999999999999995444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG4279|consensus

Probab=99.29  E-value=3.1e-12  Score=89.44  Aligned_cols=106  Identities=15%  Similarity=0.276  Sum_probs=73.6

Q ss_pred             eeecCCCCCCHHHH-HHHH---hcCC-CCCCCCc-----CcccCHHHHHHHHHHhcccCCCCCCCCh--HHHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEI-VESV---RKGE-KCLRPNL-----SELTCEEEVTAIMKRCWNEDPSERPDFT--TEIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~-~~~~---~~g~-~~~~p~~-----~~~~~~~dv~s~g~~~we~~~~~~p~~~--~~~~~~l~~~~   69 (116)
                      .+||+|||-++.-. ++..   =+|. -+++|++     .-|..++||||||.++-|+.+++-|+..  ..-....+-|.
T Consensus       714 vlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGm  793 (1226)
T KOG4279|consen  714 VLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGM  793 (1226)
T ss_pred             eEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcc
Confidence            58999999875311 0000   1122 3678886     2378899999999999999888655431  11122334455


Q ss_pred             CCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 KCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      --..|++|. ....+..+.|.+|+..+|..||+.++++.
T Consensus       794 yKvHP~iPe-elsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  794 YKVHPPIPE-ELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             eecCCCCcH-HHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            555666655 68888999999999999999999998864

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.29  E-value=2.9e-12  Score=83.99  Aligned_cols=107  Identities=7%  Similarity=-0.020  Sum_probs=64.3

Q ss_pred             eeecCCCCCCHHHHHHH--HhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC--
Q psy12612          2 RVELSDLRILRDEIVES--VRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK--   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~--   70 (116)
                      ++||+|||++.......  ......+.+||.    ..++.++||||+|+++|++..+..|...   .+.+..+.....  
T Consensus       156 ~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  235 (343)
T cd07878         156 ELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTP  235 (343)
T ss_pred             CEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            58999999986321110  001123567775    2367789999999999998877665321   111111111000  


Q ss_pred             -----------------CCCCCCCc-------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 -----------------CLRPSLSE-------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 -----------------~~~p~~~~-------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                       ...+..+.       ...++.+.+|+.+|+..||.+||+..+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         236 SPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             CHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                             00011110       124456789999999999999999999874

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.28  E-value=2.3e-12  Score=84.17  Aligned_cols=107  Identities=11%  Similarity=0.039  Sum_probs=63.8

Q ss_pred             eeecCCCCCCHHHHHHHH---------hcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHH
Q psy12612          2 RVELSDLRILRDEIVESV---------RKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---------~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l   65 (116)
                      .+||+|||++........         .....+.+|+.    ..++.++|+||||+++|++..+..|....   ..+..+
T Consensus       145 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~  224 (334)
T cd07855         145 ELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLI  224 (334)
T ss_pred             cEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHH
Confidence            589999999853211100         01112445664    23567899999999999988766553210   000000


Q ss_pred             hc--CC--------------------CCCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RK--GE--------------------KCLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~--~~--------------------~~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..  |.                    ....+..+.    ...+.++.+++.+||+.+|++||++.+++.
T Consensus       225 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         225 LSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             HHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            00  00                    001111110    135788999999999999999999998865

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.28  E-value=1.4e-12  Score=82.17  Aligned_cols=101  Identities=15%  Similarity=0.199  Sum_probs=64.9

Q ss_pred             eeecCCCCCCHHHHHH---HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE---SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------~~~~~~l~~~   68 (116)
                      .+||+|||++......   ....| ..+.+|+.   ..++.++|+||+|+++|++..+..|...      .++...... 
T Consensus       138 ~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-  216 (258)
T cd05578         138 HVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET-  216 (258)
T ss_pred             CEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-
Confidence            5799999987532111   00111 12445654   2247789999999999999888777442      122222211 


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCH--HHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF--TTLK  107 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~--~~i~  107 (116)
                      .   .+..+. ..+.++.+++.+||..+|.+||++  +++.
T Consensus       217 ~---~~~~~~-~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         217 A---DVLYPA-TWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             c---cccCcc-cCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence            1   222222 578899999999999999999999  6654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG1035|consensus

Probab=99.28  E-value=1.3e-11  Score=89.90  Aligned_cols=83  Identities=19%  Similarity=0.257  Sum_probs=58.8

Q ss_pred             CCCCCc----C--cccCHHHHHHHHHHhcccCCCCCCCCh-HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCC
Q psy12612         25 CLRPNL----S--ELTCEEEVTAIMKRCWNEDPSERPDFT-TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDP   97 (116)
Q Consensus        25 ~~~p~~----~--~~~~~~dv~s~g~~~we~~~~~~p~~~-~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p   97 (116)
                      +.+||+    .  .|+.+.|+||+|++++|+...-.+.+. ..++..++.|..+..+.+....++.+ ..+|+...+.||
T Consensus       781 YvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e-~slI~~Ll~hdP  859 (1351)
T KOG1035|consen  781 YVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLRKGSIPEPADFFDPEHPEE-ASLIRWLLSHDP  859 (1351)
T ss_pred             eecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcccCCCCCCcccccccchHH-HHHHHHHhcCCC
Confidence            567876    2  589999999999999998653222221 25667777776655544433345444 679999999999


Q ss_pred             CCCCCHHHHHH
Q psy12612         98 SERPDFTTLKA  108 (116)
Q Consensus        98 ~~Rp~~~~i~~  108 (116)
                      .+|||..+++.
T Consensus       860 ~kRPtA~eLL~  870 (1351)
T KOG1035|consen  860 SKRPTATELLN  870 (1351)
T ss_pred             ccCCCHHHHhh
Confidence            99999999864

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.28  E-value=6.1e-12  Score=81.39  Aligned_cols=107  Identities=19%  Similarity=0.192  Sum_probs=63.2

Q ss_pred             eeecCCCCCCHHHHHH---------HHh--cC-CCCCCCCc-----CcccCHHHHHHHHHHhcccCCCCCCCCh----HH
Q psy12612          2 RVELSDLRILRDEIVE---------SVR--KG-EKCLRPNL-----SELTCEEEVTAIMKRCWNEDPSERPDFT----TE   60 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---------~~~--~g-~~~~~p~~-----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~   60 (116)
                      .+||+|||.+..-...         ...  .+ ..+.+|+.     ..++.++|+||||+++|++..+..|...    ..
T Consensus       139 ~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~  218 (314)
T cd08216         139 KVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM  218 (314)
T ss_pred             ceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            4799999977421100         000  01 12456664     2356789999999999999887776542    11


Q ss_pred             HHHHHhcCCC--------------C-------------CCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         61 IVESVRKGEK--------------C-------------LRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        61 ~~~~l~~~~~--------------~-------------~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.+.....              .             ...... ....+.++.+++.+||..+|++||++++++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         219 LLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             HHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence            1122211000              0             000000 0123457889999999999999999999865

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.28  E-value=6e-12  Score=81.05  Aligned_cols=107  Identities=11%  Similarity=0.006  Sum_probs=61.1

Q ss_pred             eeecCCCCCCHHHHHHHHh---------cCCCCCCCCcC----cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVESVR---------KGEKCLRPNLS----ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~---------~g~~~~~p~~~----~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||++..-......         ....+.+||..    .++.++|+||||+++|++..+..|...   ......+
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~  236 (310)
T cd07865         157 ILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLI  236 (310)
T ss_pred             cEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            5899999988632110000         01124567741    246789999999999998876544211   1111111


Q ss_pred             hcCCCCCC----CC-----------------------CCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLR----PS-----------------------LSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~----p~-----------------------~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ........    |.                       +........+.+++.+||..+|.+||++.+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         237 SQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             HHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            11000000    00                       000012355678999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.27  E-value=5e-12  Score=81.69  Aligned_cols=107  Identities=11%  Similarity=-0.011  Sum_probs=64.3

Q ss_pred             eeecCCCCCCHHHHHH--HHh---cCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEIVE--SVR---KGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~---~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~   69 (116)
                      ++||+|||++......  ...   ....+.+||.    ..++.++|+||+|+++|++..+..|...   .+....+....
T Consensus       146 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~  225 (309)
T cd07845         146 CLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLL  225 (309)
T ss_pred             CEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            5899999988632110  000   0112456774    2357889999999999999887655322   12222221110


Q ss_pred             C----CC-----------CCCCCc----------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 K----CL-----------RPSLSE----------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~----~~-----------~p~~~~----------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .    ..           ...++.          ...+.+..++|.+|+..||++||+..+++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         226 GTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             CCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            0    00           000000          124567889999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.27  E-value=7.7e-12  Score=85.96  Aligned_cols=107  Identities=11%  Similarity=-0.002  Sum_probs=64.0

Q ss_pred             eeecCCCCCCHHHHHH--H---HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-------HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVE--S---VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-------TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~---~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-------~~~~~~l   65 (116)
                      ++||+|||+++.-...  .   ...| ..+.+||.   ..++.++||||||+++||+..++.+++.       .++...+
T Consensus       305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~  384 (501)
T PHA03210        305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKII  384 (501)
T ss_pred             CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHH
Confidence            5899999998531100  0   0112 23557775   3467899999999999998766543221       1222222


Q ss_pred             hcCCC--C-------------------CCC-CC----CccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEK--C-------------------LRP-SL----SELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~--~-------------------~~p-~~----~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .....  .                   ..+ .+    .....+.++.+++.+|+..||.+||+..+++.
T Consensus       385 ~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~  453 (501)
T PHA03210        385 DSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA  453 (501)
T ss_pred             HhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence            11000  0                   000 00    00124556778899999999999999999875

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.27  E-value=7.5e-12  Score=79.74  Aligned_cols=107  Identities=11%  Similarity=0.056  Sum_probs=62.3

Q ss_pred             eeecCCCCCCHHHHHHHH---hcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc--
Q psy12612          2 RVELSDLRILRDEIVESV---RKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK--   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~--   67 (116)
                      .+||+|||++..-.....   ..+. .+.+|+.    ..++.++|+||||+++|++..+..|...    ..+......  
T Consensus       137 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~  216 (283)
T cd07830         137 VVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLG  216 (283)
T ss_pred             CEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcC
Confidence            589999998853211000   0111 2456664    2357789999999999999887544311    011111100  


Q ss_pred             ---------------CCCCCCCCCCc-------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 ---------------GEKCLRPSLSE-------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ---------------~~~~~~p~~~~-------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                     ......+....       ...+.++.+++.+||..+|++||++++++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         217 TPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             CCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence                           00000000000       012467899999999999999999999864

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.26  E-value=5.2e-12  Score=82.89  Aligned_cols=107  Identities=8%  Similarity=-0.004  Sum_probs=64.1

Q ss_pred             eeecCCCCCCHHHHHHH--HhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC--
Q psy12612          2 RVELSDLRILRDEIVES--VRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK--   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~--   70 (116)
                      ++||+|||++.......  ......+.+|+.    ..++.++||||+|+++|++..+..|...   .+....+.....  
T Consensus       156 ~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~  235 (343)
T cd07851         156 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTP  235 (343)
T ss_pred             CEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Confidence            58999999986321110  000112345653    1346789999999999999887665422   111122111111  


Q ss_pred             ----------------------CCCCCCCc--cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 ----------------------CLRPSLSE--LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ----------------------~~~p~~~~--~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                            ..++.+..  ...+.++.+++.+||+.+|++||++.+|+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         236 DEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             CHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence                                  00111100  124678899999999999999999999864

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.26  E-value=7.9e-12  Score=82.01  Aligned_cols=107  Identities=10%  Similarity=-0.036  Sum_probs=63.3

Q ss_pred             eeecCCCCCCHHHHH--HH---Hh--cC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHH
Q psy12612          2 RVELSDLRILRDEIV--ES---VR--KG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~---~~--~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l   65 (116)
                      .+||+|||++.....  ..   ..  .+ ..+.+||.    ..++.++|+||||+++|++..+..|...    ......+
T Consensus       153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~  232 (342)
T cd07854         153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL  232 (342)
T ss_pred             eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            479999999852100  00   00  01 12445663    2356789999999999999888766532    0111111


Q ss_pred             hc----------------------CCC-CCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RK----------------------GEK-CLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~----------------------~~~-~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..                      ... ...|... ....+.++.+++.+||..+|.+||++.+++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence            00                      000 0011000 0135677889999999999999999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.26  E-value=8.9e-12  Score=79.09  Aligned_cols=71  Identities=15%  Similarity=0.102  Sum_probs=50.3

Q ss_pred             ccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCH----HH
Q psy12612         33 LTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF----TT  105 (116)
Q Consensus        33 ~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~----~~  105 (116)
                      .+.++|+|++|+.+|++..+..|.-.   ......+..... ..|.    ..+..+.+++.+||..+|++||++    .+
T Consensus       199 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~  273 (280)
T cd05581         199 AGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEY-SFPP----NFPPDAKDLIEKLLVLDPQDRLGVNEGYDE  273 (280)
T ss_pred             CChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCC-CCCC----ccCHHHHHHHHHHhcCCHhhCCCcccCHHH
Confidence            46689999999999999887665322   122233332222 2222    567889999999999999999999    77


Q ss_pred             HHH
Q psy12612        106 LKA  108 (116)
Q Consensus       106 i~~  108 (116)
                      ++.
T Consensus       274 ll~  276 (280)
T cd05581         274 LKA  276 (280)
T ss_pred             Hhc
Confidence            653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.26  E-value=5.9e-12  Score=80.84  Aligned_cols=106  Identities=9%  Similarity=0.022  Sum_probs=62.6

Q ss_pred             eeecCCCCCCHHHHHH--HHh--cC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE--SVR--KG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~--~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      .+||+|||++......  ...  .+ ..+.+|+.    ..++.++|+||||+++|++..+ .|.|.    ......+...
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g-~~~~~~~~~~~~~~~~~~~  218 (298)
T cd07841         140 VLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLR-VPFLPGDSDIDQLGKIFEA  218 (298)
T ss_pred             CEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcC-CccccCCccHHHHHHHHHH
Confidence            5899999998532110  000  01 12345553    2356789999999999998887 44332    0111111110


Q ss_pred             C-----------------C--CCCCCCC----ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 E-----------------K--CLRPSLS----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~-----------------~--~~~p~~~----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .                 .  ...+..+    ....+.++.+++.+||..+|++||++.+++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         219 LGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             cCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            0                 0  0001110    0134678899999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.26  E-value=4.8e-12  Score=81.14  Aligned_cols=101  Identities=14%  Similarity=0.182  Sum_probs=65.8

Q ss_pred             eeecCCCCCCHHHHHHH--HhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIVES--VRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~   73 (116)
                      ++||+|||++.......  ......+.+|+.   ...+.++|+||||+++|++..+..|...   .+....+..+. ...
T Consensus       139 ~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~  217 (290)
T cd05580         139 YIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGK-VRF  217 (290)
T ss_pred             CEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-ccC
Confidence            58999999986421110  011113455663   2246679999999999999988777432   12333333332 222


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHH
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLK  107 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~  107 (116)
                      |.    ..+..+.+++.+||..+|.+|+     +..++.
T Consensus       218 ~~----~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~  252 (290)
T cd05580         218 PS----FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK  252 (290)
T ss_pred             Cc----cCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence            22    5678999999999999999999     666664

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.25  E-value=1.4e-11  Score=79.45  Aligned_cols=107  Identities=12%  Similarity=0.000  Sum_probs=62.2

Q ss_pred             eeecCCCCCCHHHHHHHH--hc--------------CCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---
Q psy12612          2 RVELSDLRILRDEIVESV--RK--------------GEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~--------------g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---   58 (116)
                      .+||+|||+++.......  ..              ...+.+||.    ..++.++||||||+++|++..+..|...   
T Consensus       153 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~  232 (311)
T cd07866         153 ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD  232 (311)
T ss_pred             CEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH
Confidence            589999999863211000  00              011445664    1256789999999999999887655321   


Q ss_pred             HHHHHHHhc-CCCC----------------------CCCCCCc--cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         59 TEIVESVRK-GEKC----------------------LRPSLSE--LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        59 ~~~~~~l~~-~~~~----------------------~~p~~~~--~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ......+.. ...+                      ..+.+..  .....++.+++.+|+..+|++||+..+++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         233 IDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            111111111 0000                      0000000  123357889999999999999999998864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0593|consensus

Probab=99.25  E-value=2.5e-11  Score=77.57  Aligned_cols=106  Identities=19%  Similarity=0.213  Sum_probs=65.4

Q ss_pred             eeecCCCCCCHHHH-----H-HHHhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCC--CCCh--HHHHH---H
Q psy12612          2 RVELSDLRILRDEI-----V-ESVRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSER--PDFT--TEIVE---S   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~-----~-~~~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~--p~~~--~~~~~---~   64 (116)
                      .|||||||+++.-.     + ..+. ..-+-+||+    -+|..+.|||++|...=|+..++-  |.-+  .++..   .
T Consensus       139 vvKLCDFGFAR~L~~pgd~YTDYVA-TRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~kt  217 (396)
T KOG0593|consen  139 VVKLCDFGFARTLSAPGDNYTDYVA-TRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKT  217 (396)
T ss_pred             cEEeccchhhHhhcCCcchhhhhhh-hhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHH
Confidence            58999999987422     1 2221 112346775    257889999999999888776642  2111  11111   0


Q ss_pred             H----------------hcCCCCCCCCCCc------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         65 V----------------RKGEKCLRPSLSE------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        65 l----------------~~~~~~~~p~~~~------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +                -.|.+.+.|.-+.      .....-+.++|..|+..||++|++.++++.
T Consensus       218 LG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  218 LGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             HcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            0                0244433333221      134456779999999999999999998854

>KOG0603|consensus

Probab=99.24  E-value=8.5e-12  Score=85.52  Aligned_cols=100  Identities=12%  Similarity=0.091  Sum_probs=71.4

Q ss_pred             eeecCCCCCCHHHHHHHHhcCC--CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVESVRKGE--KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g~--~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~~~~   72 (116)
                      ++||+|||.....-.......+  .+.+||+   ..|+..+|+||||+++|++..+..|...    .++...+..+.   
T Consensus       454 ~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~---  530 (612)
T KOG0603|consen  454 HLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPK---  530 (612)
T ss_pred             cEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCc---
Confidence            4899999988642222111111  3467776   4588999999999999999998877432    24554444332   


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                         +. ..++.+.++|+++|++.||.+|++..++..
T Consensus       531 ---~s-~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  531 ---FS-ECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             ---cc-cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence               21 268888999999999999999999998853

>KOG0033|consensus

Probab=99.24  E-value=5.2e-12  Score=78.78  Aligned_cols=104  Identities=15%  Similarity=0.173  Sum_probs=75.6

Q ss_pred             eeecCCCCCCHHHHHHHHhc---CC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC-
Q psy12612          2 RVELSDLRILRDEIVESVRK---GE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK-   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~---g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~-   70 (116)
                      -||++|||++-+--......   |. .+++||+   ..|++++|||+.|++++-+..+..|+++   ..+.+.+..|.. 
T Consensus       151 ~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd  230 (355)
T KOG0033|consen  151 AVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYD  230 (355)
T ss_pred             ceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccC
Confidence            38999999985321111111   22 2567876   4589999999999999998888777665   367778877655 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                      ...|.+  +.+.++.++|+++.+..||.+|-|..|.+
T Consensus       231 ~~~~~w--~~is~~Ak~LvrrML~~dP~kRIta~EAL  265 (355)
T KOG0033|consen  231 YPSPEW--DTVTPEAKSLIRRMLTVNPKKRITADEAL  265 (355)
T ss_pred             CCCccc--CcCCHHHHHHHHHHhccChhhhccHHHHh
Confidence            333332  25778899999999999999999987764

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.23  E-value=1.2e-11  Score=90.47  Aligned_cols=92  Identities=17%  Similarity=0.216  Sum_probs=61.6

Q ss_pred             CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHHHHHHhcCCC------CCCCCCC-----ccchHHH
Q psy12612         24 KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEIVESVRKGEK------CLRPSLS-----ELTCEEE   84 (116)
Q Consensus        24 ~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~~~~l~~~~~------~~~p~~~-----~~~~~~~   84 (116)
                      .+.+||.   ..++.++||||||+++||+.+++.|...     ..+.........      ...|.+.     ......+
T Consensus       843 ~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  922 (968)
T PLN00113        843 AYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVE  922 (968)
T ss_pred             cccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHH
Confidence            4677876   3478899999999999999998877421     012211111000      1112111     0123446


Q ss_pred             HHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         85 VTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        85 l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.+++.+||+.+|++||++.+++..|+.+.+
T Consensus       923 ~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        923 VMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            7889999999999999999999999988754

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.23  E-value=8.4e-12  Score=81.52  Aligned_cols=107  Identities=7%  Similarity=0.012  Sum_probs=63.2

Q ss_pred             eeecCCCCCCHHHHHHH------H---hcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVES------V---RKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~------~---~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||++..-....      .   .....+.+|+.    ..++.++|+||+|+++|++..+..|...   ......+
T Consensus       143 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~  222 (332)
T cd07857         143 ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQI  222 (332)
T ss_pred             CEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHH
Confidence            58999999985311000      0   01113456774    2357789999999999998776554321   0111110


Q ss_pred             hc------------------------CCCCCCCCCCc--cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RK------------------------GEKCLRPSLSE--LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~------------------------~~~~~~p~~~~--~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..                        ........+..  ...+..+.+++.+|++.+|.+||++.+++.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         223 LQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            00                        00000111110  135678999999999999999999999864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.23  E-value=1.2e-11  Score=79.23  Aligned_cols=107  Identities=11%  Similarity=0.045  Sum_probs=63.2

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcCCCCCCCCcC----cccCHHHHHHHHHHhcccCCCCCCCCh-----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES-----VRKGEKCLRPNLS----ELTCEEEVTAIMKRCWNEDPSERPDFT-----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g~~~~~p~~~----~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~~~~l~~   67 (116)
                      ++||+|||+++......     ......+.+|+..    .++.++|+||||+++|++..+..|...     +.+......
T Consensus       141 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~  220 (291)
T cd07870         141 ELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTV  220 (291)
T ss_pred             cEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Confidence            58999999886321100     0011235567742    256789999999999999888766422     011111100


Q ss_pred             -C---------------CC-----CCCC-CCC----ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 -G---------------EK-----CLRP-SLS----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 -~---------------~~-----~~~p-~~~----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       +               +.     ...+ .+.    ....+.++.+++.+|+..+|++|||+.+++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         221 LGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             cCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence             0               00     0000 000    0012467889999999999999999998864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.22  E-value=1.1e-11  Score=81.66  Aligned_cols=107  Identities=8%  Similarity=0.003  Sum_probs=62.9

Q ss_pred             eeecCCCCCCHHHHHHHH---hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHH------
Q psy12612          2 RVELSDLRILRDEIVESV---RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESV------   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l------   65 (116)
                      ++||+|||+++.......   ..+ ..+.+||.   ..++.++||||||+++|++..+..|....   .....+      
T Consensus       156 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~  235 (353)
T cd07850         156 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGT  235 (353)
T ss_pred             CEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCC
Confidence            589999999863211100   011 12455664   24678899999999999988776553210   000000      


Q ss_pred             -----------------hcCCCCC-------CCCC--C------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 -----------------RKGEKCL-------RPSL--S------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 -----------------~~~~~~~-------~p~~--~------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                       .......       .+..  +      ....+..+.+++.+|+..||++||++.+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         236 PSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             CCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                             0000000       0000  0      0124567889999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.22  E-value=5.6e-12  Score=80.15  Aligned_cols=107  Identities=8%  Similarity=-0.029  Sum_probs=63.0

Q ss_pred             eeecCCCCCCHHHHHHH--H---hcCCCCCCCCcC----cccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcC-
Q psy12612          2 RVELSDLRILRDEIVES--V---RKGEKCLRPNLS----ELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKG-   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~---~~g~~~~~p~~~----~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~-   68 (116)
                      .+||+|||+++......  .   .....+.+|+..    .++.++|+|+||+++|++..+..|.-..   .....+... 
T Consensus       136 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  215 (282)
T cd07829         136 VLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQIL  215 (282)
T ss_pred             CEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHh
Confidence            58999999886421100  0   011224556641    4567899999999999998875443211   111111100 


Q ss_pred             ----------------CCCCCCCCCc-------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 ----------------EKCLRPSLSE-------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ----------------~~~~~p~~~~-------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                      .....+....       ...+.++.+++.+||..+|++||++.+++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         216 GTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             CCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence                            0000000000       123678999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.21  E-value=1.9e-11  Score=77.87  Aligned_cols=107  Identities=8%  Similarity=-0.037  Sum_probs=63.4

Q ss_pred             eeecCCCCCCHHHHHHHH----hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcC-
Q psy12612          2 RVELSDLRILRDEIVESV----RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKG-   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~-   68 (116)
                      ++||+|||+++.......    ..+ ..+..|+.    ..++.++|+|+||+++|++..+..|...   .+....+... 
T Consensus       138 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~  217 (284)
T cd07836         138 ELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIM  217 (284)
T ss_pred             cEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence            589999999863211000    001 12455664    2357789999999999999887665432   1111111100 


Q ss_pred             --------------C--CCCCCCCCc-------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 --------------E--KCLRPSLSE-------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 --------------~--~~~~p~~~~-------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                    .  ....|....       ..++..+.+++.+||+.+|.+||++.+++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         218 GTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             CCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                          0  000010000       134567889999999999999999999864

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.21  E-value=7.2e-12  Score=80.36  Aligned_cols=107  Identities=13%  Similarity=0.056  Sum_probs=63.4

Q ss_pred             eeecCCCCCCHHHHHH--HHh--cC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHh--
Q psy12612          2 RVELSDLRILRDEIVE--SVR--KG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVR--   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~--~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~--   66 (116)
                      .+||+|||++......  ...  .+ ..+.+||.    ..++.++|+||+|+++|++.++..|...    ..+...+.  
T Consensus       141 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~  220 (294)
T PLN00009        141 ALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRIL  220 (294)
T ss_pred             EEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            5899999998532110  000  01 12445653    1246789999999999999887655322    11111111  


Q ss_pred             -cCC-------------CCCCCCCC-------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 -KGE-------------KCLRPSLS-------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 -~~~-------------~~~~p~~~-------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       ...             ....+...       ....+.++.+++.+|+..+|++||++.+++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        221 GTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             CCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence             000             00000000       0135677899999999999999999999865

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.21  E-value=1.6e-11  Score=79.38  Aligned_cols=28  Identities=11%  Similarity=0.169  Sum_probs=24.4

Q ss_pred             hHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         81 CEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        81 ~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .+.++.+++.+|+..+|++||++.+++.
T Consensus       285 ~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         285 PDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             CCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            3456889999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0195|consensus

Probab=99.21  E-value=3.3e-11  Score=76.39  Aligned_cols=76  Identities=20%  Similarity=0.371  Sum_probs=58.6

Q ss_pred             CHHHHHHHHHHhcccCCCCCCCCh---HHH-HHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         35 CEEEVTAIMKRCWNEDPSERPDFT---TEI-VESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        35 ~~~dv~s~g~~~we~~~~~~p~~~---~~~-~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      -.+|+|||.+.+||+.+++-|+.+   .+. +....+|.|   +.+|+ .....+.+||.-|.+.||.+||.|..|+-.|
T Consensus       368 raadmwsfaillwel~trevpfadlspmecgmkialeglr---v~ipp-gis~hm~klm~icmnedpgkrpkfdmivpil  443 (448)
T KOG0195|consen  368 RAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLR---VHIPP-GISRHMNKLMNICMNEDPGKRPKFDMIVPIL  443 (448)
T ss_pred             hhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcccc---ccCCC-CccHHHHHHHHHHhcCCCCcCCCcceehhhH
Confidence            357999999999999999888543   111 112224554   33333 7889999999999999999999999999999


Q ss_pred             HHhh
Q psy12612        111 RKLN  114 (116)
Q Consensus       111 ~~~~  114 (116)
                      +++.
T Consensus       444 ekm~  447 (448)
T KOG0195|consen  444 EKMI  447 (448)
T ss_pred             HHhc
Confidence            9875

>KOG2052|consensus

Probab=99.21  E-value=1e-11  Score=82.44  Aligned_cols=111  Identities=20%  Similarity=0.395  Sum_probs=70.4

Q ss_pred             eeecCCCCCCHH--HHHHHH------hcC-CCCCCCCcCc-------c--cCHHHHHHHHHHhcccC----------CCC
Q psy12612          2 RVELSDLRILRD--EIVESV------RKG-EKCLRPNLSE-------L--TCEEEVTAIMKRCWNED----------PSE   53 (116)
Q Consensus         2 ~vKi~Dfgls~~--~~~~~~------~~g-~~~~~p~~~~-------~--~~~~dv~s~g~~~we~~----------~~~   53 (116)
                      .+-|+|+||+-.  +....+      +-| .|+++||+..       |  ...+||||||..+||+.          .++
T Consensus       354 ~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~  433 (513)
T KOG2052|consen  354 TCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQ  433 (513)
T ss_pred             cEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhc
Confidence            466999999731  111111      123 4799999721       1  23589999999999932          122


Q ss_pred             CCCCh--------HHHHHHHhcCCCCCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         54 RPDFT--------TEIVESVRKGEKCLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        54 ~p~~~--------~~~~~~l~~~~~~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      -|+++        +++...+.-  +..+|.+|.    ..+-..+.+||+.||..+|.-|-+.--|...|.++.
T Consensus       434 ~Pyyd~Vp~DPs~eeMrkVVCv--~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~  504 (513)
T KOG2052|consen  434 LPYYDVVPSDPSFEEMRKVVCV--QKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS  504 (513)
T ss_pred             CCcccCCCCCCCHHHHhcceee--cccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence            23222        233333322  234555543    234467889999999999999999988888888775

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.20  E-value=2.9e-11  Score=77.45  Aligned_cols=107  Identities=10%  Similarity=0.080  Sum_probs=61.9

Q ss_pred             eeecCCCCCCHHHHHHHH-----hcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHH---
Q psy12612          2 RVELSDLRILRDEIVESV-----RKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESV---   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-----~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l---   65 (116)
                      ++||+|||+++.......     .....+.+|+.    ..++.++||||+|+++|++..+..|...    .+....+   
T Consensus       141 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~  220 (291)
T cd07844         141 ELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRV  220 (291)
T ss_pred             CEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHh
Confidence            589999999853211000     01123456664    2357789999999999998877655321    0111111   


Q ss_pred             -hcCCCC------------------CCC-CCCc--cchH--HHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 -RKGEKC------------------LRP-SLSE--LTCE--EEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 -~~~~~~------------------~~p-~~~~--~~~~--~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       ......                  ..+ .+..  ....  .++.+++.+|+..+|++||++.+++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         221 LGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             cCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence             000000                  000 0000  0122  67789999999999999999998864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG4717|consensus

Probab=99.20  E-value=2.4e-11  Score=82.65  Aligned_cols=102  Identities=13%  Similarity=0.168  Sum_probs=71.3

Q ss_pred             eeecCCCCCCHHHHH-HHHh--cC-CCCCCCCc---CcccC-HHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIV-ESVR--KG-EKCLRPNL---SELTC-EEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-~~~~--~g-~~~~~p~~---~~~~~-~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      -|||+|||+++.-.. +++.  .| ..+.+|++   ..|+. ..||||+|+++|-+..++.|+-.   .+.+..+.... 
T Consensus       157 lVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCK-  235 (864)
T KOG4717|consen  157 LVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCK-  235 (864)
T ss_pred             ceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccc-
Confidence            389999999974211 1221  12 24678886   34554 47999999999988888766421   24555554432 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..-|.    ....+..+||+..+..||.+|-+.++|..
T Consensus       236 YtvPs----hvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  236 YTVPS----HVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             ccCch----hhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            22344    58889999999999999999999999964

>KOG0694|consensus

Probab=99.20  E-value=1.5e-11  Score=85.07  Aligned_cols=97  Identities=21%  Similarity=0.282  Sum_probs=73.3

Q ss_pred             eeecCCCCCCHHHHHHHHhc----CC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESVRK----GE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~----g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      .|||+||||.++.......+    |. .+++|++   ..|+...|.|+||+++||+..++.|+-.   +++...+.....
T Consensus       506 h~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~  585 (694)
T KOG0694|consen  506 HVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEV  585 (694)
T ss_pred             cEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCC
Confidence            68999999998765221111    22 4678887   3589999999999999999999888653   467777765432


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                       .-|.    .++.+..+||++-+..+|++|-..
T Consensus       586 -~yP~----~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  586 -RYPR----FLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             -CCCC----cccHHHHHHHHHHhccCcccccCC
Confidence             2333    688999999999999999999764

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.19  E-value=1.6e-11  Score=80.16  Aligned_cols=107  Identities=9%  Similarity=0.029  Sum_probs=63.2

Q ss_pred             eeecCCCCCCHHHHHHHH--hcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCChH---H----HHHHH---
Q psy12612          2 RVELSDLRILRDEIVESV--RKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFTT---E----IVESV---   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~----~~~~l---   65 (116)
                      ++||+|||+++.......  .....+..|+.    ..++.++|+||||+++|++..+..|....   .    +...+   
T Consensus       146 ~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~  225 (328)
T cd07856         146 DLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTP  225 (328)
T ss_pred             CEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            589999999863210000  00112455664    23577899999999999988775543110   0    00000   


Q ss_pred             --------hcCC------C-CCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 --------RKGE------K-CLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 --------~~~~------~-~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                              ..+.      . ......+.    ..++.++.++|.+||..+|++||++.+++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~  287 (328)
T cd07856         226 PDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA  287 (328)
T ss_pred             CHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                    0000      0 00000110    135688999999999999999999999864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.19  E-value=3.4e-13  Score=84.79  Aligned_cols=107  Identities=19%  Similarity=0.196  Sum_probs=64.4

Q ss_pred             eeecCCCCCCHHH--HHHHH--hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCC
Q psy12612          2 RVELSDLRILRDE--IVESV--RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~--~~~~~--~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~   69 (116)
                      .+||+|||++..-  .....  ..+ ..+.+||.    ..++.++|+||+|+++|++..+..|....   .....+....
T Consensus       136 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~  215 (260)
T PF00069_consen  136 EVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKIL  215 (260)
T ss_dssp             EEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcc
Confidence            5899999998521  00000  001 12445654    23678999999999999988877764431   1111111111


Q ss_pred             C--CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 K--CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~--~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .  ...........+.++.+++..||+.+|++||++.+++.
T Consensus       216 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  216 KRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             cccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0  00000000023588999999999999999999999864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.19  E-value=3e-11  Score=77.39  Aligned_cols=101  Identities=19%  Similarity=0.206  Sum_probs=63.9

Q ss_pred             eeecCCCCCCHHHHHHHH-----hcC-CCCCCCCcC-----cccCHHHHHHHHHHhcccCCCCCCCCh-------HHHHH
Q psy12612          2 RVELSDLRILRDEIVESV-----RKG-EKCLRPNLS-----ELTCEEEVTAIMKRCWNEDPSERPDFT-------TEIVE   63 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-----~~g-~~~~~p~~~-----~~~~~~dv~s~g~~~we~~~~~~p~~~-------~~~~~   63 (116)
                      ++||+|||+++.......     ..| ..+.+|+..     .++.++||||||+++|++..+..|...       ..+..
T Consensus       143 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~  222 (290)
T cd05613         143 HVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR  222 (290)
T ss_pred             CEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHH
Confidence            689999998853211110     011 234566642     235679999999999999887766421       12333


Q ss_pred             HHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHH
Q psy12612         64 SVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLK  107 (116)
Q Consensus        64 ~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~  107 (116)
                      .+...... .|.    .++..+.+++.+||..+|++||     +..++.
T Consensus       223 ~~~~~~~~-~~~----~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~  266 (290)
T cd05613         223 RILKSEPP-YPQ----EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIK  266 (290)
T ss_pred             HhhccCCC-CCc----cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHH
Confidence            33222211 122    5778899999999999999997     556554

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.19  E-value=5.5e-11  Score=77.68  Aligned_cols=84  Identities=8%  Similarity=0.027  Sum_probs=52.1

Q ss_pred             CCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH----hcCCCC----------------CCC-CC
Q psy12612         25 CLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV----RKGEKC----------------LRP-SL   76 (116)
Q Consensus        25 ~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l----~~~~~~----------------~~p-~~   76 (116)
                      +.+||.    ..++.++|+||+|+++|++..+..|...   .+.+..+    ......                ..| .+
T Consensus       199 y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (335)
T PTZ00024        199 YRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDL  278 (335)
T ss_pred             CCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccH
Confidence            445664    1257789999999999999886655322   1111111    111000                000 00


Q ss_pred             C--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         77 S--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        77 ~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .  ...++.++.+++.+||..+|++||++.+++.
T Consensus       279 ~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        279 KTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             HHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            0  0134677899999999999999999999864

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.19  E-value=1.3e-11  Score=82.13  Aligned_cols=82  Identities=16%  Similarity=0.152  Sum_probs=54.6

Q ss_pred             CCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcC-CCCCCCCCCccchHHHHHHHHHH--hccC
Q psy12612         25 CLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKG-EKCLRPSLSELTCEEEVTAIMKR--CWNE   95 (116)
Q Consensus        25 ~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~-~~~~~p~~~~~~~~~~l~~l~~~--Cw~~   95 (116)
                      +.+||.   ..++.++||||||+++||+..+..|...   .+....+... .....|.  ...++++..+|+.+  |+..
T Consensus       214 Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~--~~~~s~~~~dli~~ll~~~~  291 (381)
T cd05626         214 YIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPP--QVKLSPEAVDLITKLCCSAE  291 (381)
T ss_pred             ccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCC--CCCCCHHHHHHHHHHccCcc
Confidence            556765   2367889999999999999998877543   1222223221 1122221  01467888899987  6777


Q ss_pred             CCCCCCCHHHHHH
Q psy12612         96 DPSERPDFTTLKA  108 (116)
Q Consensus        96 ~p~~Rp~~~~i~~  108 (116)
                      ++..|+++.+|+.
T Consensus       292 ~~~~R~~~~~~l~  304 (381)
T cd05626         292 ERLGRNGADDIKA  304 (381)
T ss_pred             cccCCCCHHHHhc
Confidence            7888999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG3653|consensus

Probab=99.18  E-value=3.7e-11  Score=80.35  Aligned_cols=111  Identities=19%  Similarity=0.346  Sum_probs=70.3

Q ss_pred             CeeecCCCCCCHH------HHHHHHhcC-CCCCCCCcCc----cc-----CHHHHHHHHHHhcccCCC-------C----
Q psy12612          1 MRVELSDLRILRD------EIVESVRKG-EKCLRPNLSE----LT-----CEEEVTAIMKRCWNEDPS-------E----   53 (116)
Q Consensus         1 ~~vKi~Dfgls~~------~~~~~~~~g-~~~~~p~~~~----~~-----~~~dv~s~g~~~we~~~~-------~----   53 (116)
                      +++-|+||||+..      +-....+.| .|+++||+.+    +.     ...||||+|..+||+.++       .    
T Consensus       353 lTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Y  432 (534)
T KOG3653|consen  353 LTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEY  432 (534)
T ss_pred             CcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcc
Confidence            4567999999841      001111334 4799998732    22     357999999999995431       1    


Q ss_pred             ----------CCCChHHHHHHH-hcCCCCCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         54 ----------RPDFTTEIVESV-RKGEKCLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        54 ----------~p~~~~~~~~~l-~~~~~~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                                +|++. ++...+ .+..   ||.++.    -.-..-+.+.++.||..|++.|-|..-+.+++..+..
T Consensus       433 qlpfe~evG~hPt~e-~mq~~VV~kK~---RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  433 QLPFEAEVGNHPTLE-EMQELVVRKKQ---RPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             cCchhHHhcCCCCHH-HHHHHHHhhcc---CCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence                      22222 444433 3333   454442    1233457899999999999999999988888776653

>KOG0592|consensus

Probab=99.18  E-value=4.5e-11  Score=81.08  Aligned_cols=103  Identities=16%  Similarity=0.196  Sum_probs=69.4

Q ss_pred             CeeecCCCCCCH----HHHH--HHH----hc-------C-CCCCCCCcC---cccCHHHHHHHHHHhcccCCCCCCCCh-
Q psy12612          1 MRVELSDLRILR----DEIV--ESV----RK-------G-EKCLRPNLS---ELTCEEEVTAIMKRCWNEDPSERPDFT-   58 (116)
Q Consensus         1 ~~vKi~Dfgls~----~~~~--~~~----~~-------g-~~~~~p~~~---~~~~~~dv~s~g~~~we~~~~~~p~~~-   58 (116)
                      |++||+|||-+.    .+..  ...    ..       | ..+..||+.   .-+..+|+|+||.++|++..+.-|+-+ 
T Consensus       211 mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~  290 (604)
T KOG0592|consen  211 GHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA  290 (604)
T ss_pred             CcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc
Confidence            799999999653    1111  000    00       1 135567652   235679999999999999998876543 


Q ss_pred             --HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         59 --TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        59 --~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        ..+...+..-.....+     +.++...+|+.+-+..||++|.+.++|..
T Consensus       291 NeyliFqkI~~l~y~fp~-----~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~  337 (604)
T KOG0592|consen  291 NEYLIFQKIQALDYEFPE-----GFPEDARDLIKKLLVRDPSDRLTSQQIKA  337 (604)
T ss_pred             cHHHHHHHHHHhcccCCC-----CCCHHHHHHHHHHHccCccccccHHHHhh
Confidence              1334444443323233     67888999999999999999999998864

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.17  E-value=3.3e-11  Score=79.69  Aligned_cols=82  Identities=13%  Similarity=0.133  Sum_probs=52.7

Q ss_pred             CCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC-CCCCCCCccchHHHHHHHHHH--hccC
Q psy12612         25 CLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK-CLRPSLSELTCEEEVTAIMKR--CWNE   95 (116)
Q Consensus        25 ~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~-~~~p~~~~~~~~~~l~~l~~~--Cw~~   95 (116)
                      +.+||.   ..++.++||||||+++|++..+..|...   .+....+..... ..-|.-  ..++.+..+++.+  |...
T Consensus       202 Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~--~~~s~~~~~li~~l~~~~~  279 (363)
T cd05628         202 YIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPE--VPISEKAKDLILRFCCEWE  279 (363)
T ss_pred             ccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCc--CCCCHHHHHHHHHHcCChh
Confidence            556765   3467889999999999999998877543   244444544221 111210  1356677887776  4444


Q ss_pred             CCCCCCCHHHHHH
Q psy12612         96 DPSERPDFTTLKA  108 (116)
Q Consensus        96 ~p~~Rp~~~~i~~  108 (116)
                      ++..||++.+|..
T Consensus       280 ~r~~r~~~~ei~~  292 (363)
T cd05628         280 HRIGAPGVEEIKT  292 (363)
T ss_pred             hcCCCCCHHHHhC
Confidence            5667899999865

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.16  E-value=8.3e-12  Score=82.82  Aligned_cols=105  Identities=9%  Similarity=0.125  Sum_probs=68.5

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcC-CCCCCCCcC-------cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVES-----VRKG-EKCLRPNLS-------ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g-~~~~~p~~~-------~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||++.......     ...| ..+.+||..       .++.++|+||||+++|++..+..|...   ......+
T Consensus       180 ~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i  259 (370)
T cd05596         180 HLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI  259 (370)
T ss_pred             CEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHH
Confidence            58999999985321100     0112 235567641       256789999999999999988877543   1333444


Q ss_pred             hcCCC-CCCCCCCccchHHHHHHHHHHhccCCCCC--CCCHHHHHH
Q psy12612         66 RKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSE--RPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~--Rp~~~~i~~  108 (116)
                      ..+.. ...|.  ....+.++.+++.+|+..+|.+  |++..+++.
T Consensus       260 ~~~~~~~~~~~--~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~  303 (370)
T cd05596         260 MDHKNSLTFPD--DIEISKQAKDLICAFLTDREVRLGRNGVDEIKS  303 (370)
T ss_pred             HcCCCcCCCCC--cCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence            33321 21221  0146788999999999988887  999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG2345|consensus

Probab=99.14  E-value=6.8e-11  Score=73.69  Aligned_cols=76  Identities=18%  Similarity=0.264  Sum_probs=55.8

Q ss_pred             ccCHHHHHHHHHHhcccCCCCCCCChHHHHH-------HHhcCCCCCCCCCCc-cchHHHHHHHHHHhccCCCCCCCCHH
Q psy12612         33 LTCEEEVTAIMKRCWNEDPSERPDFTTEIVE-------SVRKGEKCLRPSLSE-LTCEEEVTAIMKRCWNEDPSERPDFT  104 (116)
Q Consensus        33 ~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~-------~l~~~~~~~~p~~~~-~~~~~~l~~l~~~Cw~~~p~~Rp~~~  104 (116)
                      .+.+.||||||.++|++.-+..|+-  .+.+       ++..+..    .+|. ...++.+.++++.|...||.+||+..
T Consensus       218 i~ertDIWSLGCtLYa~mf~~sPfe--~~~~~GgSlaLAv~n~q~----s~P~~~~yse~l~~lik~mlqvdP~qRP~i~  291 (302)
T KOG2345|consen  218 ITERTDIWSLGCTLYAMMFGESPFE--RIYQQGGSLALAVQNAQI----SIPNSSRYSEALHQLIKSMLQVDPNQRPTIP  291 (302)
T ss_pred             cccccchhhhhHHHHHHHHcCCcch--HHhhcCCeEEEeeecccc----ccCCCCCccHHHHHHHHHHhcCCcccCCCHH
Confidence            4567899999999999887777643  2222       1222221    1121 24778899999999999999999999


Q ss_pred             HHHHHHHHhh
Q psy12612        105 TLKAAIRKLN  114 (116)
Q Consensus       105 ~i~~~l~~~~  114 (116)
                      +++..++++.
T Consensus       292 ~ll~~~d~Li  301 (302)
T KOG2345|consen  292 ELLSKLDDLI  301 (302)
T ss_pred             HHHHHHHhhc
Confidence            9999998764

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.13  E-value=2.7e-11  Score=75.73  Aligned_cols=96  Identities=11%  Similarity=0.029  Sum_probs=59.8

Q ss_pred             eeecCCCCCCHHHHHHHHh--cCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCCCCC
Q psy12612          2 RVELSDLRILRDEIVESVR--KGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPSL   76 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~--~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~p~~   76 (116)
                      .+|++|||++.........  ....+.+|+.   ..++.++|+||+|+++|++..+..+...  ....+........|. 
T Consensus       123 ~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~--~~~~~~~~~~~~~~~-  199 (237)
T cd05576         123 HIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVEC--HPSGINTHTTLNIPE-  199 (237)
T ss_pred             CEEEecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc--CchhcccccccCCcc-
Confidence            4799999987532111000  0112456664   2356789999999999998877644221  111111111122232 


Q ss_pred             CccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         77 SELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        77 ~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                         .++..+.+++.+|++.||++|++.
T Consensus       200 ---~~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         200 ---WVSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             ---cCCHHHHHHHHHHccCCHHHhcCC
Confidence               577889999999999999999996

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.12  E-value=4.9e-11  Score=78.38  Aligned_cols=107  Identities=7%  Similarity=-0.013  Sum_probs=63.7

Q ss_pred             eeecCCCCCCHHHHHHHH-hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC--
Q psy12612          2 RVELSDLRILRDEIVESV-RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK--   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~--   70 (116)
                      .+||+|||+++....... ..+ ..+.+|+.    ..++.++|+||||+++|++..+..|...   ......+.....  
T Consensus       158 ~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  237 (345)
T cd07877         158 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP  237 (345)
T ss_pred             CEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            589999999864211110 011 12445664    2356789999999999999887665321   111111111000  


Q ss_pred             --------------------CCCCCCC----ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 --------------------CLRPSLS----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 --------------------~~~p~~~----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                          ...|...    ....+.++.+++.+|+..+|.+||+..+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  299 (345)
T cd07877         238 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  299 (345)
T ss_pred             CHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence                                0001100    0124667899999999999999999998864

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0574|consensus

Probab=99.10  E-value=2.8e-11  Score=77.64  Aligned_cols=107  Identities=11%  Similarity=0.154  Sum_probs=68.7

Q ss_pred             eeecCCCCCCHHHHHHHHhc----CC-CCCCCCcC---cccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIVESVRK----GE-KCLRPNLS---ELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~----g~-~~~~p~~~---~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~   73 (116)
                      ..|++|||.+-.-.......    |. -+++|++-   -|+|.+||||+|++.-|+..++-|..+-.-++++-..--.+.
T Consensus       167 ~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PP  246 (502)
T KOG0574|consen  167 IAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPP  246 (502)
T ss_pred             hhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCC
Confidence            46999999986422221111    22 25677763   389999999999999988766544332111222211111223


Q ss_pred             CCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         74 PSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        74 p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      |.+. +...+.++.+.+++|+-..|++|-+..+++.
T Consensus       247 PTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  247 PTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             CCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence            4443 2457778899999999999999999887754

>KOG0032|consensus

Probab=99.10  E-value=1.5e-10  Score=77.17  Aligned_cols=105  Identities=14%  Similarity=0.127  Sum_probs=74.6

Q ss_pred             eeecCCCCCCHHHHH----HHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC-
Q psy12612          2 RVELSDLRILRDEIV----ESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK-   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~-   70 (116)
                      ++|++|||++.....    ..+.+...+.+|++   ..|+...||||+|+.+|-+..+..|+..   ......+..+.- 
T Consensus       177 ~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~  256 (382)
T KOG0032|consen  177 RIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFD  256 (382)
T ss_pred             cEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCC
Confidence            689999999963221    11111224667886   3578899999999999999888877654   234445555543 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      -..+.+  ...+....+++..+...||..|++..+++.
T Consensus       257 f~~~~w--~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  257 FTSEPW--DDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             CCCCCc--cccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence            122222  357888999999999999999999998865

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.10  E-value=3e-11  Score=79.02  Aligned_cols=106  Identities=13%  Similarity=0.155  Sum_probs=65.6

Q ss_pred             eeecCCCCCCHHHHH-----HHHhcCC-CCCCCCcC--------cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHH
Q psy12612          2 RVELSDLRILRDEIV-----ESVRKGE-KCLRPNLS--------ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~~~~~g~-~~~~p~~~--------~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~   64 (116)
                      ++||+|||++..-..     .....|. .+.+||+.        .++.++||||||+++|++..+..|...   .+....
T Consensus       140 ~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~  219 (332)
T cd05623         140 HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK  219 (332)
T ss_pred             CEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            589999998753111     0011122 45677741        357789999999999999998888543   133334


Q ss_pred             HhcCC-CCCCCCCCccchHHHHHHHHHHhccCC--CCCCCCHHHHHH
Q psy12612         65 VRKGE-KCLRPSLSELTCEEEVTAIMKRCWNED--PSERPDFTTLKA  108 (116)
Q Consensus        65 l~~~~-~~~~p~~~~~~~~~~l~~l~~~Cw~~~--p~~Rp~~~~i~~  108 (116)
                      +.... +...|.. ...++.++.+|+.+|...+  +..|+++.++..
T Consensus       220 i~~~~~~~~~p~~-~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~  265 (332)
T cd05623         220 IMNHKERFQFPAQ-VTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ  265 (332)
T ss_pred             HhCCCccccCCCc-cccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence            43322 1222221 1257888999999987543  444678888754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.09  E-value=3.2e-11  Score=80.11  Aligned_cols=105  Identities=10%  Similarity=0.100  Sum_probs=65.5

Q ss_pred             eeecCCCCCCHHHHH----H-HHhcC-CCCCCCCcC-------cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIV----E-SVRKG-EKCLRPNLS-------ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~-~~~~g-~~~~~p~~~-------~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||++..-..    . ....| ..+.+||..       .++.++||||||+++|++..+..|...   ......+
T Consensus       180 ~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i  259 (371)
T cd05622         180 HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI  259 (371)
T ss_pred             CEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            589999999853110    0 01112 235677751       256789999999999999998877543   1333444


Q ss_pred             hcCCC-CCCCCCCccchHHHHHHHHHHhccCCCC--CCCCHHHHHH
Q psy12612         66 RKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPS--ERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~--~Rp~~~~i~~  108 (116)
                      ..... ...|.  ....+.++.+++..|...++.  .|+++.+|..
T Consensus       260 ~~~~~~~~~~~--~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~  303 (371)
T cd05622         260 MNHKNSLTFPD--DNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  303 (371)
T ss_pred             HcCCCcccCCC--cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhc
Confidence            43222 21221  114778899999999974333  2778888765

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.09  E-value=1.7e-10  Score=75.32  Aligned_cols=29  Identities=24%  Similarity=0.552  Sum_probs=25.5

Q ss_pred             chHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         80 TCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        80 ~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .++..+.+|+.+||..||++||++.+++.
T Consensus       279 ~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         279 TFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             hhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            35677899999999999999999999854

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.07  E-value=6.3e-11  Score=78.24  Aligned_cols=81  Identities=14%  Similarity=0.145  Sum_probs=54.0

Q ss_pred             CCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC-CCCCCCCccchHHHHHHHHHHhccCCC
Q psy12612         25 CLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDP   97 (116)
Q Consensus        25 ~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p   97 (116)
                      +.+||+   ..++.++||||||+++|++..+..|...   .+....+..... ...|.  ...+++++.+++.+|+. +|
T Consensus       205 y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~--~~~~s~~~~~li~~ll~-~p  281 (364)
T cd05599         205 YIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPD--EVPLSPEAKDLIKRLCC-EA  281 (364)
T ss_pred             ccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCC--CCCCCHHHHHHHHHHcc-CH
Confidence            456664   2367889999999999999998877543   233333433221 11121  11467889999999996 99


Q ss_pred             CCCCC---HHHHHH
Q psy12612         98 SERPD---FTTLKA  108 (116)
Q Consensus        98 ~~Rp~---~~~i~~  108 (116)
                      .+|++   ..+++.
T Consensus       282 ~~R~~~~~~~~ll~  295 (364)
T cd05599         282 ERRLGNNGVNEIKS  295 (364)
T ss_pred             hhcCCCCCHHHHhc
Confidence            99998   666643

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0585|consensus

Probab=99.05  E-value=2.7e-10  Score=76.52  Aligned_cols=104  Identities=17%  Similarity=0.264  Sum_probs=69.7

Q ss_pred             eeecCCCCCCHH-------HHHHHHh--cCC-CCCCCCc--C---c-c-cCHHHHHHHHHHhcccCCCCCCCChH---HH
Q psy12612          2 RVELSDLRILRD-------EIVESVR--KGE-KCLRPNL--S---E-L-TCEEEVTAIMKRCWNEDPSERPDFTT---EI   61 (116)
Q Consensus         2 ~vKi~Dfgls~~-------~~~~~~~--~g~-~~~~p~~--~---~-~-~~~~dv~s~g~~~we~~~~~~p~~~~---~~   61 (116)
                      +|||+|||.+..       .....+.  .|. ..++||.  .   . | ..+.||||+|+++|.+.-++.|+++.   ++
T Consensus       248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l  327 (576)
T KOG0585|consen  248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL  327 (576)
T ss_pred             cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH
Confidence            699999998752       2222222  233 2457774  1   1 1 24679999999999999999998873   23


Q ss_pred             HHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         62 VESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        62 ~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...+.+. .+.-|..+  +..+.+.+||.+.+..||+.|-+..+|..
T Consensus       328 ~~KIvn~-pL~fP~~p--e~~e~~kDli~~lL~KdP~~Ri~l~~ik~  371 (576)
T KOG0585|consen  328 FDKIVND-PLEFPENP--EINEDLKDLIKRLLEKDPEQRITLPDIKL  371 (576)
T ss_pred             HHHHhcC-cccCCCcc--cccHHHHHHHHHHhhcChhheeehhhhee
Confidence            3333221 22233211  46788999999999999999999988753

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.04  E-value=7.5e-11  Score=78.28  Aligned_cols=81  Identities=16%  Similarity=0.111  Sum_probs=53.4

Q ss_pred             CCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC-CCCCCCCccchHHHHHHHHHHhccCCC
Q psy12612         25 CLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDP   97 (116)
Q Consensus        25 ~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p   97 (116)
                      +.+||.   ..++.++||||||+++|++..+..|...   .+....+..... ...|.  ...++.+..+++.+++ .+|
T Consensus       210 y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~--~~~~s~~~~~li~~l~-~~p  286 (376)
T cd05598         210 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPS--QAKLSREASDLILRLC-CGA  286 (376)
T ss_pred             ccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCC--CCCCCHHHHHHHHHHh-cCH
Confidence            556764   2367789999999999999988877543   123333332221 11111  1246788889999876 499


Q ss_pred             CCCC---CHHHHHH
Q psy12612         98 SERP---DFTTLKA  108 (116)
Q Consensus        98 ~~Rp---~~~~i~~  108 (116)
                      .+|+   +..++..
T Consensus       287 ~~R~~~~t~~ell~  300 (376)
T cd05598         287 EDRLGKNGADEIKA  300 (376)
T ss_pred             hhcCCCCCHHHHhC
Confidence            9999   7787754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0587|consensus

Probab=99.03  E-value=1.1e-10  Score=82.83  Aligned_cols=107  Identities=13%  Similarity=0.163  Sum_probs=77.2

Q ss_pred             eeecCCCCCCHHHHHHHHh----cCCC-CCCCCc--------CcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVESVR----KGEK-CLRPNL--------SELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~----~g~~-~~~p~~--------~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~   68 (116)
                      .||+.|||+|.+-......    .|+. +++|++        ..|+..+|+||+|++.-|+.-+.-|.++..-..++-..
T Consensus       161 ~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I  240 (953)
T KOG0587|consen  161 EVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI  240 (953)
T ss_pred             cEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC
Confidence            6999999999753222211    1332 567776        23788899999999999988887776653344455455


Q ss_pred             CCCCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 EKCLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~~~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      -|.++|.+. +.....++.+.|..|+..|-.+||+..+++.
T Consensus       241 pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  241 PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            555566554 3467788999999999999999999988754

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.03  E-value=1.7e-10  Score=75.87  Aligned_cols=106  Identities=8%  Similarity=-0.005  Sum_probs=63.1

Q ss_pred             eeecCCCCCCHHHHHHHH-hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCChH----HHHHHHhcCC--
Q psy12612          2 RVELSDLRILRDEIVESV-RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFTT----EIVESVRKGE--   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~~----~~~~~l~~~~--   69 (116)
                      ++||+|||++........ ..+ ..+.+|+.    ..++.++|+||+|+++|++..+..|....    .....+....  
T Consensus       156 ~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  235 (343)
T cd07880         156 ELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTP  235 (343)
T ss_pred             CEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            589999999863211000 011 12345653    22567899999999999988876664320    1111111000  


Q ss_pred             ---------------------CCCCCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         70 ---------------------KCLRPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        70 ---------------------~~~~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                                           ...+..+.  ...++..+.+++.+|++.+|++||+..+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l  296 (343)
T cd07880         236 SKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEAL  296 (343)
T ss_pred             CHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHh
Confidence                                 00000000  014667789999999999999999999987

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.02  E-value=2.1e-10  Score=75.00  Aligned_cols=106  Identities=14%  Similarity=0.155  Sum_probs=63.3

Q ss_pred             eeecCCCCCCHHHHH-----HHHhcC-CCCCCCCcC--------cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHH
Q psy12612          2 RVELSDLRILRDEIV-----ESVRKG-EKCLRPNLS--------ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~~~~~g-~~~~~p~~~--------~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~   64 (116)
                      ++||+|||++..-..     .....| ..+.+||..        .++.++||||+|+++|++..+..|...   .+....
T Consensus       140 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~  219 (331)
T cd05597         140 HIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK  219 (331)
T ss_pred             CEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHH
Confidence            589999998742110     011112 245667641        246689999999999999998887543   133333


Q ss_pred             HhcCC-CCCCCCCCccchHHHHHHHHHHhccC--CCCCCCCHHHHHH
Q psy12612         65 VRKGE-KCLRPSLSELTCEEEVTAIMKRCWNE--DPSERPDFTTLKA  108 (116)
Q Consensus        65 l~~~~-~~~~p~~~~~~~~~~l~~l~~~Cw~~--~p~~Rp~~~~i~~  108 (116)
                      +.... ....|... ..++.++.+++.+|+..  ++..|++..+++.
T Consensus       220 i~~~~~~~~~~~~~-~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~  265 (331)
T cd05597         220 IMNHKEHFQFPPDV-TDVSEEAKDLIRRLICSPETRLGRNGLQDFKD  265 (331)
T ss_pred             HHcCCCcccCCCcc-CCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence            33222 11112111 14678899999986643  4444778887754

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.01  E-value=6.7e-10  Score=78.85  Aligned_cols=104  Identities=13%  Similarity=0.077  Sum_probs=66.8

Q ss_pred             eecCCCCCCHHHHHHH--Hh----cCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCC
Q psy12612          3 VELSDLRILRDEIVES--VR----KGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGE   69 (116)
Q Consensus         3 vKi~Dfgls~~~~~~~--~~----~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~   69 (116)
                      +++.|||.++......  ..    .|. .+.+||+   ..++.++||||||+++||+..+..|+..   .++...+....
T Consensus       517 ~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~  596 (669)
T cd05610         517 KIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRD  596 (669)
T ss_pred             cccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcC
Confidence            4667888775321100  00    122 3556764   2367899999999999999888776432   23343333222


Q ss_pred             CCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 KCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       ...|... ..++..+.+++..||..+|.+||++.+++.
T Consensus       597 -~~~p~~~-~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~  633 (669)
T cd05610         597 -IPWPEGE-EKLSVNAQNAIEILLTMDPTKRAGLKELKQ  633 (669)
T ss_pred             -CCCCccc-ccCCHHHHHHHHHHcccChhHCcCHHHHHh
Confidence             1122211 156788899999999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.00  E-value=2.8e-10  Score=79.38  Aligned_cols=74  Identities=7%  Similarity=-0.084  Sum_probs=42.5

Q ss_pred             CHHHHHHHHHHhcccCCCCCCCChH--HHHHHHhcC-CC----------CCCCCCCc-----cchHHHHHHHHHHhccCC
Q psy12612         35 CEEEVTAIMKRCWNEDPSERPDFTT--EIVESVRKG-EK----------CLRPSLSE-----LTCEEEVTAIMKRCWNED   96 (116)
Q Consensus        35 ~~~dv~s~g~~~we~~~~~~p~~~~--~~~~~l~~~-~~----------~~~p~~~~-----~~~~~~l~~l~~~Cw~~~   96 (116)
                      .++||||+|+++||+.....+.-..  ++...+... ..          ...+.+..     +......++|+.+|+..|
T Consensus       358 ~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d  437 (566)
T PLN03225        358 DRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK  437 (566)
T ss_pred             CCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence            3459999999999987544433221  111112111 10          00010000     011233558999999999


Q ss_pred             CCCCCCHHHHHH
Q psy12612         97 PSERPDFTTLKA  108 (116)
Q Consensus        97 p~~Rp~~~~i~~  108 (116)
                      |.+|||..+++.
T Consensus       438 P~kR~ta~e~L~  449 (566)
T PLN03225        438 GRQRISAKAALA  449 (566)
T ss_pred             cccCCCHHHHhC
Confidence            999999999865

>KOG4645|consensus

Probab=99.00  E-value=4.7e-10  Score=82.54  Aligned_cols=103  Identities=16%  Similarity=0.196  Sum_probs=75.1

Q ss_pred             eeecCCCCCCHH-----H-HHHHHhc--CC-CCCCCCcCcc------cCHHHHHHHHHHhcccCCCCCCCCh----HHHH
Q psy12612          2 RVELSDLRILRD-----E-IVESVRK--GE-KCLRPNLSEL------TCEEEVTAIMKRCWNEDPSERPDFT----TEIV   62 (116)
Q Consensus         2 ~vKi~Dfgls~~-----~-~~~~~~~--g~-~~~~p~~~~~------~~~~dv~s~g~~~we~~~~~~p~~~----~~~~   62 (116)
                      -+|.+|||-+..     + +...++.  |. -+++||+-.-      --..||||+|..+-|+.+++||...    -+++
T Consensus      1372 ~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIM 1451 (1509)
T KOG4645|consen 1372 LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIM 1451 (1509)
T ss_pred             cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHH
Confidence            379999997632     1 1112211  33 4778986221      2357999999999999999999532    2788


Q ss_pred             HHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         63 ESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        63 ~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..|..|..+.-|.    ....+=.+.+..|+..||++|-+..+|++
T Consensus      1452 y~V~~gh~Pq~P~----~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1452 YHVAAGHKPQIPE----RLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             hHHhccCCCCCch----hhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence            8999998555554    68888899999999999999988777654

>KOG0616|consensus

Probab=99.00  E-value=1.4e-10  Score=73.88  Aligned_cols=94  Identities=14%  Similarity=0.210  Sum_probs=69.2

Q ss_pred             eeecCCCCCCHHHH--HHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEI--VESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~--~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~   73 (116)
                      .+||+|||++....  ...++....+.+||+   ..|+...|-|+||+..||+..+.-|+++   .++.+.+..|.--. 
T Consensus       182 ~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~f-  260 (355)
T KOG0616|consen  182 HIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKF-  260 (355)
T ss_pred             cEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccC-
Confidence            58999999996421  122233335778886   3578899999999999999999888665   36777777766432 


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCC
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSER  100 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~R  100 (116)
                      |+    ..+.++..|+..-+..|-.+|
T Consensus       261 P~----~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  261 PS----YFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             Cc----ccCHHHHHHHHHHHhhhhHhh
Confidence            33    577888999999888887777

>KOG0611|consensus

Probab=99.00  E-value=1.3e-09  Score=72.66  Aligned_cols=101  Identities=10%  Similarity=0.167  Sum_probs=68.4

Q ss_pred             eeecCCCCCCHHHHH-HHHhc--CC-CCCCCCc---Cccc-CHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIV-ESVRK--GE-KCLRPNL---SELT-CEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-~~~~~--g~-~~~~p~~---~~~~-~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||||+.-.. +.+++  |. -+..|++   ..|. ...|.||+|+++|-+..+..|+-.   ..++.++.+|..
T Consensus       191 NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY  270 (668)
T KOG0611|consen  191 NIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY  270 (668)
T ss_pred             CeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc
Confidence            589999999985322 12221  33 3556775   1232 347999999999998877766432   367777777654


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      -. |     ..|.+..-||+-.+-.||+.|-|..+|..
T Consensus       271 rE-P-----~~PSdA~gLIRwmLmVNP~RRATieDiAs  302 (668)
T KOG0611|consen  271 RE-P-----ETPSDASGLIRWMLMVNPERRATIEDIAS  302 (668)
T ss_pred             cC-C-----CCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence            32 2     23455567888888899999999998864

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.98  E-value=9.9e-11  Score=77.77  Aligned_cols=105  Identities=9%  Similarity=0.086  Sum_probs=65.4

Q ss_pred             eeecCCCCCCHHHHHH-H----HhcC-CCCCCCCcC-------cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVE-S----VRKG-EKCLRPNLS-------ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~----~~~g-~~~~~p~~~-------~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      .+||+|||++...... .    ...| ..+.+||..       .++.++|+||+|+++|++..+..|...   ......+
T Consensus       180 ~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i  259 (370)
T cd05621         180 HLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI  259 (370)
T ss_pred             CEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            5899999998531100 0    0112 235677741       156789999999999999998877543   1333344


Q ss_pred             hcCCC-CCCCCCCccchHHHHHHHHHHhccCCCC--CCCCHHHHHH
Q psy12612         66 RKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPS--ERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~--~Rp~~~~i~~  108 (116)
                      ..... ...|.  ....+..+.+++..|+..++.  .|++..+++.
T Consensus       260 ~~~~~~~~~p~--~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~  303 (370)
T cd05621         260 MDHKNSLNFPE--DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ  303 (370)
T ss_pred             HhCCcccCCCC--cccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence            33222 22221  014677889999999975443  3889988765

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.98  E-value=7.1e-10  Score=72.34  Aligned_cols=28  Identities=21%  Similarity=0.500  Sum_probs=25.1

Q ss_pred             hHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         81 CEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        81 ~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .++++.+++.+||..||++|||+.+++.
T Consensus       279 ~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         279 FSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             cCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence            4567889999999999999999999865

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0580|consensus

Probab=98.97  E-value=8e-10  Score=68.60  Aligned_cols=102  Identities=17%  Similarity=0.169  Sum_probs=69.9

Q ss_pred             eeecCCCCCCHHHHH--HHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIV--ESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      .+||+|||-|-..-.  .....| .-+..||.   ...+...|+|++|+.|+|+.-+..|+-+   .+....+.+.. ..
T Consensus       162 ~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~-~~  240 (281)
T KOG0580|consen  162 ELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVD-LK  240 (281)
T ss_pred             CeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcc-cc
Confidence            479999998842211  111112 23456664   2357789999999999998887666433   24445554432 22


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      -|.    .++.+..+||.+|...+|.+|.+..+++.
T Consensus       241 ~p~----~is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  241 FPS----TISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             CCc----ccChhHHHHHHHHhccCccccccHHHHhh
Confidence            333    68899999999999999999999999875

>KOG0604|consensus

Probab=98.94  E-value=3.8e-10  Score=72.23  Aligned_cols=105  Identities=10%  Similarity=0.160  Sum_probs=72.3

Q ss_pred             eeecCCCCCCHHHHH-HHHhcC-C--CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-------HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV-ESVRKG-E--KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-------TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-~~~~~g-~--~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-------~~~~~~l~~   67 (116)
                      .+||+|||+++.... ..+.+. +  .+.+|++   ..|+...|+||+|+++|-+..+--|+++       ..+...++.
T Consensus       202 ~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~  281 (400)
T KOG0604|consen  202 PLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRT  281 (400)
T ss_pred             ceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhc
Confidence            589999999974321 112221 1  2456665   2478889999999999987776555543       145566776


Q ss_pred             CCCC-CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEKC-LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~~-~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      |+.. +.|.  .+.+++..+++|+.-+..+|++|-+..++++
T Consensus       282 gqy~FP~pE--Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  282 GQYEFPEPE--WSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             cCccCCChh--HhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            6652 2222  2356778889999999999999999999875

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.94  E-value=2.5e-10  Score=74.71  Aligned_cols=106  Identities=16%  Similarity=0.171  Sum_probs=63.8

Q ss_pred             eeecCCCCCCHHHHH-----HHHhcC-CCCCCCCc--------CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHH
Q psy12612          2 RVELSDLRILRDEIV-----ESVRKG-EKCLRPNL--------SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~~~~~g-~~~~~p~~--------~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~   64 (116)
                      ++||+|||++.....     .....| ..+.+||.        ..++.++|+||||+++|++..+..|...   .+....
T Consensus       140 ~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~  219 (331)
T cd05624         140 HIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK  219 (331)
T ss_pred             CEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHH
Confidence            589999999753110     011112 24566764        1356789999999999999998888543   133333


Q ss_pred             Hhc-CCCCCCCCCCccchHHHHHHHHHHhccCCCCC--CCCHHHHHH
Q psy12612         65 VRK-GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSE--RPDFTTLKA  108 (116)
Q Consensus        65 l~~-~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~--Rp~~~~i~~  108 (116)
                      +.. ..+...|... ..++.++.+++.+|+..++.+  |+++.++..
T Consensus       220 i~~~~~~~~~p~~~-~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~  265 (331)
T cd05624         220 IMNHEERFQFPSHI-TDVSEEAKDLIQRLICSRERRLGQNGIEDFKK  265 (331)
T ss_pred             HHcCCCcccCCCcc-ccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence            332 2222222211 246788999999998755433  456766643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.93  E-value=2.9e-10  Score=75.70  Aligned_cols=80  Identities=13%  Similarity=0.115  Sum_probs=50.7

Q ss_pred             CCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCC-CCCCCCCCccchHHHHHHHHHHhccCCC
Q psy12612         25 CLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGE-KCLRPSLSELTCEEEVTAIMKRCWNEDP   97 (116)
Q Consensus        25 ~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~-~~~~p~~~~~~~~~~l~~l~~~Cw~~~p   97 (116)
                      +.+||+   ..++.++||||+|+++||+..+..|...   .+....+.... ....|.  ....+++..+++.++. .+|
T Consensus       214 Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~-~~p  290 (382)
T cd05625         214 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPP--QAKLSPEASDLIIKLC-RGP  290 (382)
T ss_pred             cCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCC--cccCCHHHHHHHHHHc-cCH
Confidence            556775   3467889999999999999998877543   12222332222 122221  1145677788776653 589


Q ss_pred             CCCCC---HHHHH
Q psy12612         98 SERPD---FTTLK  107 (116)
Q Consensus        98 ~~Rp~---~~~i~  107 (116)
                      .+|++   ..+|.
T Consensus       291 ~~R~~~~~~~ei~  303 (382)
T cd05625         291 EDRLGKNGADEIK  303 (382)
T ss_pred             hHcCCCCCHHHHh
Confidence            99987   66664

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.93  E-value=3.9e-10  Score=74.51  Aligned_cols=80  Identities=14%  Similarity=0.129  Sum_probs=51.0

Q ss_pred             CCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCC-CCCCCCCCccchHHHHHHHHHHhccCCC
Q psy12612         25 CLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGE-KCLRPSLSELTCEEEVTAIMKRCWNEDP   97 (116)
Q Consensus        25 ~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~-~~~~p~~~~~~~~~~l~~l~~~Cw~~~p   97 (116)
                      +.+||+   ..++.++|+||||+++|++..+..|...   .+....+.... ...-|.  ....+.+..+|+.++. .+|
T Consensus       202 Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~-~~p  278 (360)
T cd05627         202 YIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPP--EVPISEKAKDLILRFC-TDS  278 (360)
T ss_pred             ccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCC--CCCCCHHHHHHHHHhc-cCh
Confidence            556764   3467889999999999999998877543   23334444322 111121  0135678888888755 499


Q ss_pred             CCCCC---HHHHH
Q psy12612         98 SERPD---FTTLK  107 (116)
Q Consensus        98 ~~Rp~---~~~i~  107 (116)
                      .+|++   +.++.
T Consensus       279 ~~R~~~~~~~ei~  291 (360)
T cd05627         279 ENRIGSNGVEEIK  291 (360)
T ss_pred             hhcCCCCCHHHHh
Confidence            99985   55554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.91  E-value=5.3e-10  Score=74.29  Aligned_cols=81  Identities=11%  Similarity=0.112  Sum_probs=52.5

Q ss_pred             CCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCC-CCCCCCCCccchHHHHHHHHHHhccCCC
Q psy12612         25 CLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGE-KCLRPSLSELTCEEEVTAIMKRCWNEDP   97 (116)
Q Consensus        25 ~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~-~~~~p~~~~~~~~~~l~~l~~~Cw~~~p   97 (116)
                      +.+||.   ..++.++||||||+++||+..+..|+..   .+....+.... ....|.  ...++.++.+++.+|.. +|
T Consensus       214 y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~dli~~lL~-~~  290 (377)
T cd05629         214 YIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPD--DIHLSVEAEDLIRRLIT-NA  290 (377)
T ss_pred             ccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCC--CCCCCHHHHHHHHHHhc-CH
Confidence            556664   2367889999999999999988777532   13333333322 122221  01467889999999997 66


Q ss_pred             CCC---CCHHHHHH
Q psy12612         98 SER---PDFTTLKA  108 (116)
Q Consensus        98 ~~R---p~~~~i~~  108 (116)
                      .+|   ++..+++.
T Consensus       291 ~~r~~r~~~~~~l~  304 (377)
T cd05629         291 ENRLGRGGAHEIKS  304 (377)
T ss_pred             hhcCCCCCHHHHhc
Confidence            665   58887754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0696|consensus

Probab=98.88  E-value=3.3e-09  Score=70.85  Aligned_cols=96  Identities=16%  Similarity=0.257  Sum_probs=67.1

Q ss_pred             eeecCCCCCCHHHHHHHHhc----CC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESVRK----GE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~----g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+||||..+.+.....+    |. .+.+|++   .+|..+.|.|+||+++||+..++-|.-.   .++..++..-..
T Consensus       488 HiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv  567 (683)
T KOG0696|consen  488 HIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV  567 (683)
T ss_pred             ceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC
Confidence            68999999998766433322    22 3678886   4578889999999999999998876433   356666654332


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCC
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPD  102 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~  102 (116)
                       .-|.    ..+.+..++...-+-..|.+|-.
T Consensus       568 -syPK----slSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  568 -SYPK----SLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             -cCcc----cccHHHHHHHHHHhhcCCccccC
Confidence             2233    56677777777777777877743

>KOG0660|consensus

Probab=98.87  E-value=2.9e-09  Score=69.19  Aligned_cols=106  Identities=15%  Similarity=0.105  Sum_probs=66.1

Q ss_pred             eeecCCCCCCHHHHH---HHHhcCC---C-CCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh------------
Q psy12612          2 RVELSDLRILRDEIV---ESVRKGE---K-CLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT------------   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~---~~~~~g~---~-~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~------------   58 (116)
                      .+|||||||++....   ..-.++|   | +-+||+    ..|+...||||.|.++=|+..++ |-|.            
T Consensus       163 ~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gk-plFpG~d~v~Ql~lI~  241 (359)
T KOG0660|consen  163 DLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGK-PLFPGKDYVHQLQLIL  241 (359)
T ss_pred             CEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCC-CCCCCCchHHHHHHHH
Confidence            369999999985321   1111233   2 345765    46899999999999998866553 3221            


Q ss_pred             -------HHHHHHHhc-------CCCCCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         59 -------TEIVESVRK-------GEKCLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        59 -------~~~~~~l~~-------~~~~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                             .+.+..+..       ...+..|..+.    ...++...+|+++.+..||.+|.|.++.+.
T Consensus       242 ~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  242 ELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             HhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence                   122222220       00122333331    256778889999999999999999998754

>KOG1151|consensus

Probab=98.85  E-value=3e-10  Score=76.32  Aligned_cols=101  Identities=18%  Similarity=0.291  Sum_probs=65.2

Q ss_pred             eeecCCCCCCHH---HHHHHH------h--cC-CCCCCCCc-------CcccCHHHHHHHHHHhcccCCCCCCCCh----
Q psy12612          2 RVELSDLRILRD---EIVESV------R--KG-EKCLRPNL-------SELTCEEEVTAIMKRCWNEDPSERPDFT----   58 (116)
Q Consensus         2 ~vKi~Dfgls~~---~~~~~~------~--~g-~~~~~p~~-------~~~~~~~dv~s~g~~~we~~~~~~p~~~----   58 (116)
                      -+||+|||||.-   +.+..+      .  .| |-+..|+.       +..+++.||||+|+++|....++.|+-.    
T Consensus       611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ  690 (775)
T KOG1151|consen  611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ  690 (775)
T ss_pred             eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH
Confidence            479999999962   111111      1  12 22344542       4578999999999999998888888533    


Q ss_pred             HHHHH--HHhcCCC---CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         59 TEIVE--SVRKGEK---CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        59 ~~~~~--~l~~~~~---~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                      ..++.  .+.+...   +.+|     .+..+..+.|++|++...++|-...++.
T Consensus       691 QdILqeNTIlkAtEVqFP~KP-----vVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  691 QDILQENTILKATEVQFPPKP-----VVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             HHHHhhhchhcceeccCCCCC-----ccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            12221  1222221   3344     4678889999999999999888777664

>KOG0586|consensus

Probab=98.84  E-value=9.2e-10  Score=75.51  Aligned_cols=103  Identities=14%  Similarity=0.126  Sum_probs=68.0

Q ss_pred             CeeecCCCCCCHHHHHHH-Hhc--CC-CCCCCCcC---cc-cCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCC
Q psy12612          1 MRVELSDLRILRDEIVES-VRK--GE-KCLRPNLS---EL-TCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGE   69 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~~~~-~~~--g~-~~~~p~~~---~~-~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~   69 (116)
                      |++||+|||+|..-.... +++  |. .+.+||+.   +| ....|+|++|+.+|.+..+..|+-.   .++...+..|.
T Consensus       192 mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk  271 (596)
T KOG0586|consen  192 MNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGK  271 (596)
T ss_pred             cceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeee
Confidence            679999999997432211 211  22 34456652   23 3468999999999999988888553   12223333322


Q ss_pred             CCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 KCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .. .|-    ....+..+|+.+-+-.+|.+|++.++|+.
T Consensus       272 ~r-Ip~----~ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  272 YR-IPF----YMSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             ec-ccc----eeechhHHHHHHhhccCccccCCHHHhhh
Confidence            11 122    45667789999999999999999999875

>KOG0605|consensus

Probab=98.81  E-value=5.1e-09  Score=71.13  Aligned_cols=71  Identities=14%  Similarity=0.100  Sum_probs=50.5

Q ss_pred             ccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC-CCCCCCCccchHHHHHHHHHHhccCCCCCCCC---HHH
Q psy12612         33 LTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPD---FTT  105 (116)
Q Consensus        33 ~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~---~~~  105 (116)
                      |...+|.||+|.+++|+.-+-.|+.+   .+....+..... +..|.  ...+..+..+||.+|.. ||.+|-.   +.|
T Consensus       365 Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~--~~~~s~eA~DLI~rll~-d~~~RLG~~G~~E  441 (550)
T KOG0605|consen  365 YGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE--EVDLSDEAKDLITRLLC-DPENRLGSKGAEE  441 (550)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC--cCcccHHHHHHHHHHhc-CHHHhcCcccHHH
Confidence            67788999999999999887666544   355555555433 22332  12577899999999998 9999865   455


Q ss_pred             H
Q psy12612        106 L  106 (116)
Q Consensus       106 i  106 (116)
                      |
T Consensus       442 I  442 (550)
T KOG0605|consen  442 I  442 (550)
T ss_pred             H
Confidence            4

>KOG0690|consensus

Probab=98.80  E-value=2.7e-09  Score=69.32  Aligned_cols=96  Identities=15%  Similarity=0.235  Sum_probs=69.4

Q ss_pred             eeecCCCCCCHHHHHHHHh----cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESVR----KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~----~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+||||.++++...-.    .| ..+.+|++   ..|.-..|.|.+|+.+||+..++.|.+.   ..+.+.+..+..
T Consensus       306 HIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~  385 (516)
T KOG0690|consen  306 HIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL  385 (516)
T ss_pred             ceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc
Confidence            6899999999987643211    12 24677886   3477789999999999999999999775   234444433321


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCC
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPD  102 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~  102 (116)
                       .-|.    ...++...|+..-+..||.+|-.
T Consensus       386 -kFPr----~ls~eAktLLsGLL~kdP~kRLG  412 (516)
T KOG0690|consen  386 -KFPR----TLSPEAKTLLSGLLKKDPKKRLG  412 (516)
T ss_pred             -cCCc----cCCHHHHHHHHHHhhcChHhhcC
Confidence             1232    57788899999999999999854

>KOG1027|consensus

Probab=98.70  E-value=9.1e-09  Score=73.08  Aligned_cols=103  Identities=17%  Similarity=0.284  Sum_probs=65.5

Q ss_pred             CeeecCCCCCCHH-----HHHHHHh--cC-CCCCCCCcC---cccCHHHHHHHHHHhcccCCCCCCCChHHHH--HHHhc
Q psy12612          1 MRVELSDLRILRD-----EIVESVR--KG-EKCLRPNLS---ELTCEEEVTAIMKRCWNEDPSERPDFTTEIV--ESVRK   67 (116)
Q Consensus         1 ~~vKi~Dfgls~~-----~~~~~~~--~g-~~~~~p~~~---~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~--~~l~~   67 (116)
                      +++||+|||++..     .......  .| ..+.+||..   .-+.+.||+|+|..++...+++..+|.....  .++..
T Consensus       648 ~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~  727 (903)
T KOG1027|consen  648 LRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT  727 (903)
T ss_pred             eeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc
Confidence            4899999999852     1122221  12 246778752   1245789999999998887764444441221  23333


Q ss_pred             CCC-CC--CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEK-CL--RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~-~~--~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      |.. +.  .|.   .++  +..+||.+..+.+|..||+..+++.
T Consensus       728 ~~~~L~~L~~~---~d~--eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  728 GNYTLVHLEPL---PDC--EAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             CccceeeeccC---chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence            433 21  221   123  7789999999999999999998864

>KOG1026|consensus

Probab=98.65  E-value=6.2e-08  Score=68.83  Aligned_cols=55  Identities=35%  Similarity=0.761  Sum_probs=50.7

Q ss_pred             CCCCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612          8 LRILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus         8 fgls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ||+|++++++.++.|..+..|+    +|+..||++++.||...|.+||+|. +|...+..
T Consensus       707 ~glSn~EVIe~i~~g~lL~~Pe----~CP~~vY~LM~~CW~~~P~~RPsF~-eI~~~L~~  761 (774)
T KOG1026|consen  707 YGLSNQEVIECIRAGQLLSCPE----NCPTEVYSLMLECWNENPKRRPSFK-EIHSRLQA  761 (774)
T ss_pred             cccchHHHHHHHHcCCcccCCC----CCCHHHHHHHHHHhhcCcccCCCHH-HHHHHHHH
Confidence            6899999999999999999999    9999999999999999999999996 77777765

>KOG0197|consensus

Probab=98.59  E-value=1.5e-07  Score=63.71  Aligned_cols=54  Identities=35%  Similarity=0.815  Sum_probs=47.8

Q ss_pred             CCCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612          9 RILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus         9 gls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      |+++.+++..+..|+|+.+|+    .|+..||.++..||+..|.+||+|. .+...+..
T Consensus       407 ~msn~ev~~~le~GyRlp~P~----~CP~~vY~lM~~CW~~~P~~RPtF~-~L~~~l~~  460 (468)
T KOG0197|consen  407 GMSNEEVLELLERGYRLPRPE----GCPDEVYELMKSCWHEDPEDRPTFE-TLREVLED  460 (468)
T ss_pred             CCCHHHHHHHHhccCcCCCCC----CCCHHHHHHHHHHhhCCcccCCCHH-HHHHHHHH
Confidence            478889999999999999999    9999999999999999999999995 55555543

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.56  E-value=3.7e-08  Score=59.44  Aligned_cols=75  Identities=12%  Similarity=0.275  Sum_probs=53.2

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcCCCCCCCCcC----cccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKGEKCLRPNLS----ELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g~~~~~p~~~----~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~   72 (116)
                      +++|+|||++......     .......+..|+..    .++...|+|++|..++++                       
T Consensus       131 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------  187 (215)
T cd00180         131 KVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------  187 (215)
T ss_pred             cEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------
Confidence            5789999987532111     01111223445431    345789999999999987                       


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAA  109 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~  109 (116)
                                ..+.+++..|+..+|++||+..+++..
T Consensus       188 ----------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 ----------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             ----------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence                      568899999999999999999998753

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0671|consensus

Probab=98.55  E-value=5.3e-09  Score=68.62  Aligned_cols=106  Identities=13%  Similarity=0.106  Sum_probs=64.5

Q ss_pred             eeecCCCCCCHHHHH--HHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HH---HHHHHh----
Q psy12612          2 RVELSDLRILRDEIV--ESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TE---IVESVR----   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~---~~~~l~----   66 (116)
                      .|||-|||-+..+-.  ..+.+...+-+||+   ..++.++||||+|.++.|+..+..-+..   .+   +++.+.    
T Consensus       250 ~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P  329 (415)
T KOG0671|consen  250 AIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIP  329 (415)
T ss_pred             ceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCc
Confidence            589999999864322  12222333557776   3468999999999999998877653211   11   111111    


Q ss_pred             --------------cCCCC-----------------CCCCC----CccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 --------------KGEKC-----------------LRPSL----SELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 --------------~~~~~-----------------~~p~~----~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                    +| ++                 .+|.-    ..+.-..++.+|++..+..||.+|.|+.|++.
T Consensus       330 ~~mi~r~~~~Kyf~~~-rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  330 SRMIKKTRKEKYFRRG-RLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             HHHhhhhhhHhhhhcc-cccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence                          01 11                 11100    00112235889999999999999999999864

>KOG4236|consensus

Probab=98.54  E-value=1.3e-08  Score=69.93  Aligned_cols=104  Identities=12%  Similarity=0.092  Sum_probs=70.8

Q ss_pred             eeecCCCCCCHH---HHHHHHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-HHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRD---EIVESVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-TEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~---~~~~~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-~~~~~~l~~~~~~~~   73 (116)
                      +|||||||+++-   ....+.-.|. .+.+||+   .-|+-.-|+||.|++.|-..++..|+.. +++-.++.+..-+..
T Consensus       705 QvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyP  784 (888)
T KOG4236|consen  705 QVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYP  784 (888)
T ss_pred             ceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccC
Confidence            689999999972   1111111233 4667876   3478888999999999998888887543 466667766554433


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCCCHHHH
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL  106 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i  106 (116)
                      | -|...+.++..+||..-++..=.+|-+....
T Consensus       785 p-~PW~eis~~AidlIn~LLqVkm~kRysvdk~  816 (888)
T KOG4236|consen  785 P-NPWSEISPEAIDLINNLLQVKMRKRYSVDKS  816 (888)
T ss_pred             C-CchhhcCHHHHHHHHHHHHHHHHHhcchHhh
Confidence            3 2334677777888888887777777776554

>KOG0659|consensus

Probab=98.49  E-value=1.1e-07  Score=60.21  Aligned_cols=106  Identities=9%  Similarity=0.092  Sum_probs=62.4

Q ss_pred             eeecCCCCCCHHHHH-HHHh---cCCC-CCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHH---HHH
Q psy12612          2 RVELSDLRILRDEIV-ESVR---KGEK-CLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEI---VES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-~~~~---~g~~-~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~---~~~   64 (116)
                      .+||+||||++.--. ....   --.| +-+||+    ..|....|+||.|.++=|+.-+ .|.|.     +|+   ...
T Consensus       139 ~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr-~P~fpG~sDidQL~~If~~  217 (318)
T KOG0659|consen  139 QLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLR-VPFFPGDSDIDQLSKIFRA  217 (318)
T ss_pred             cEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHcc-CCCCCCCchHHHHHHHHHH
Confidence            589999999974210 0000   1123 335775    3588899999999998775433 34332     121   112


Q ss_pred             HhcCCCCCCCCC-----------------C--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         65 VRKGEKCLRPSL-----------------S--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        65 l~~~~~~~~p~~-----------------~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +........|.+                 .  ...++.+..+|+...|..||.+|.+.++.+.
T Consensus       218 LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~  280 (318)
T KOG0659|consen  218 LGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK  280 (318)
T ss_pred             cCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence            211111111111                 0  0135667789999999999999999998764

>KOG1345|consensus

Probab=98.49  E-value=1.3e-07  Score=60.28  Aligned_cols=103  Identities=16%  Similarity=0.054  Sum_probs=57.6

Q ss_pred             eeecCCCCCCHHHH--HHHHhcCCCCCCCCc----C----cccCHHHHHHHHHHhcccCCCCCCCChH-----HHHHH--
Q psy12612          2 RVELSDLRILRDEI--VESVRKGEKCLRPNL----S----ELTCEEEVTAIMKRCWNEDPSERPDFTT-----EIVES--   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~--~~~~~~g~~~~~p~~----~----~~~~~~dv~s~g~~~we~~~~~~p~~~~-----~~~~~--   64 (116)
                      ||||||||+++..-  +..+..-..+..|+.    .    .-+..+|+|.||++++...++..|.-..     ...+.  
T Consensus       161 rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~  240 (378)
T KOG1345|consen  161 RVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQ  240 (378)
T ss_pred             EEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHH
Confidence            89999999997421  122211112334442    1    1245689999999999888887774320     11111  


Q ss_pred             HhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHH
Q psy12612         65 VRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTT  105 (116)
Q Consensus        65 l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~  105 (116)
                      -..+.-+..|.. -....+....+.++-+..++++|-...+
T Consensus       241 w~~rk~~~~P~~-F~~fs~~a~r~Fkk~lt~~~~drcki~~  280 (378)
T KOG1345|consen  241 WLKRKNPALPKK-FNPFSEKALRLFKKSLTPRFKDRCKIWT  280 (378)
T ss_pred             HhcccCccCchh-hcccCHHHHHHHHHhcCCcccccchhHH
Confidence            111111212210 0235567778888889999998844433

>KOG0658|consensus

Probab=98.47  E-value=5.8e-08  Score=63.38  Aligned_cols=107  Identities=11%  Similarity=0.098  Sum_probs=64.1

Q ss_pred             CeeecCCCCCCHHHHHHHHhcC---CC-CCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHH---HHH
Q psy12612          1 MRVELSDLRILRDEIVESVRKG---EK-CLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEI---VES   64 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~~~~~~~g---~~-~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~---~~~   64 (116)
                      ..+||||||-++--+...-...   .| +-+||+    ..|+++.||||.|..+=|+.-++ |-|.     .++   ...
T Consensus       163 g~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~-plFpG~s~~dQL~eIik~  241 (364)
T KOG0658|consen  163 GVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQ-PLFPGDSSVDQLVEIIKV  241 (364)
T ss_pred             CeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCC-cccCCCCHHHHHHHHHHH
Confidence            3689999998853211110011   13 345665    46999999999999998865543 3222     122   111


Q ss_pred             Hh--------c--CC--CCCCCCCC--------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         65 VR--------K--GE--KCLRPSLS--------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        65 l~--------~--~~--~~~~p~~~--------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +.        .  ..  .-..|.+.        ....+++..+++.+++..+|.+|-+..+++.
T Consensus       242 lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  242 LGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             hCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence            11        0  00  00112221        1247789999999999999999998777653

>KOG0663|consensus

Probab=98.46  E-value=1.3e-07  Score=61.58  Aligned_cols=104  Identities=14%  Similarity=0.147  Sum_probs=60.0

Q ss_pred             eeecCCCCCCHHHHHHHHhcCC-------CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh-----H---HHH
Q psy12612          2 RVELSDLRILRDEIVESVRKGE-------KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT-----T---EIV   62 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g~-------~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~---~~~   62 (116)
                      -+||+||||+|.-- ..+ ..+       -+-+|++    ..|+.+.|+||+|.++=|+.... |-|.     .   .+.
T Consensus       215 ~lKiaDFGLAR~yg-sp~-k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~k-Plf~G~sE~dQl~~If  291 (419)
T KOG0663|consen  215 ILKIADFGLAREYG-SPL-KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQK-PLFPGKSEIDQLDKIF  291 (419)
T ss_pred             cEEecccchhhhhc-CCc-ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcC-CCCCCCchHHHHHHHH
Confidence            37999999998521 111 011       1234554    45899999999999987754332 2221     1   122


Q ss_pred             HHHhcCCC-----------------------CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         63 ESVRKGEK-----------------------CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        63 ~~l~~~~~-----------------------~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.....                       ..+..++....++.-.+|+..-+..||.+|-|.++.++
T Consensus       292 ~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  292 KLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             HHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence            22211111                       11222222124456678999999999999999988653

>KOG0614|consensus

Probab=98.42  E-value=4.7e-07  Score=62.13  Aligned_cols=92  Identities=15%  Similarity=0.214  Sum_probs=64.0

Q ss_pred             eeecCCCCCCHHHHHHHHhcCC---------CCCCCCc--C-cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVESVRKGE---------KCLRPNL--S-ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g~---------~~~~p~~--~-~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~   66 (116)
                      -+||-|||+++.     +..|.         .+.+|++  . --+...|.|++|+.++|+..+.-|+-.   ....+.+.
T Consensus       558 y~KLVDFGFAKk-----i~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL  632 (732)
T KOG0614|consen  558 YLKLVDFGFAKK-----IGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL  632 (732)
T ss_pred             ceEEeehhhHHH-----hccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH
Confidence            379999999853     33332         3556665  1 135678999999999999888765322   34556666


Q ss_pred             cCCC-CCCCCCCccchHHHHHHHHHHhccCCCCCCCC
Q psy12612         67 KGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPD  102 (116)
Q Consensus        67 ~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~  102 (116)
                      +|.. ..-|.    .++....+||.+-...+|.+|-.
T Consensus       633 kGid~i~~Pr----~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  633 KGIDKIEFPR----RITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             hhhhhhhccc----ccchhHHHHHHHHHhcCcHhhhc
Confidence            6655 33444    67777888998877789999976

>KOG0576|consensus

Probab=98.41  E-value=3.5e-07  Score=64.23  Aligned_cols=103  Identities=17%  Similarity=0.261  Sum_probs=69.7

Q ss_pred             eeecCCCCCCHHHHHHHHh-----cCC-CCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHH-
Q psy12612          2 RVELSDLRILRDEIVESVR-----KGE-KCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESV-   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~-----~g~-~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l-   65 (116)
                      .||++|||.+.+ +...+.     -|. .+++|++      ..|+..+|+|+.|+..-|+...+-|-|+.   +.+... 
T Consensus       150 DvklaDfgvsaq-itati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmT  228 (829)
T KOG0576|consen  150 DVKLADFGVSAQ-ITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMT  228 (829)
T ss_pred             ceeecccCchhh-hhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhh
Confidence            489999999864 222221     133 3567876      24888999999999988877777777752   222222 


Q ss_pred             hcCCCCCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         66 RKGEKCLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        66 ~~~~~~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                      +.++.  .|.+. .....+.++++++.|.-.+|++||+...++
T Consensus       229 kS~~q--pp~lkDk~kws~~fh~fvK~altknpKkRptaeklL  269 (829)
T KOG0576|consen  229 KSGFQ--PPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLL  269 (829)
T ss_pred             ccCCC--CCcccCCccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence            22332  23332 135677899999999999999999987654

>KOG0986|consensus

Probab=98.23  E-value=3e-07  Score=62.15  Aligned_cols=97  Identities=14%  Similarity=0.157  Sum_probs=65.7

Q ss_pred             eeecCCCCCCHHHHH-HHHh--cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-------HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV-ESVR--KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-------TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-~~~~--~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-------~~~~~~l~~   67 (116)
                      +|+|||.||+.+-.- +.+.  .| ..+++||+   ..|+.+.|.|++|..+||+..+..|+-.       +++-..+..
T Consensus       325 hvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~  404 (591)
T KOG0986|consen  325 HVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE  404 (591)
T ss_pred             CeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc
Confidence            689999999853111 1111  23 25789987   3589999999999999999998887432       133333322


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                      ... .-|    +..+++..+|.+.-+..||++|-.+
T Consensus       405 ~~~-ey~----~kFS~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  405 DPE-EYS----DKFSEEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             chh-hcc----cccCHHHHHHHHHHHccCHHHhccC
Confidence            111 111    2688899999999999999998654

>KOG0612|consensus

Probab=98.20  E-value=6.4e-07  Score=66.01  Aligned_cols=103  Identities=21%  Similarity=0.262  Sum_probs=63.7

Q ss_pred             eeecCCCCCC----HHHHH-HHHhcCC-CCCCCCc--------CcccCHHHHHHHHHHhcccCCCCCCCChHHHHH---H
Q psy12612          2 RVELSDLRIL----RDEIV-ESVRKGE-KCLRPNL--------SELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE---S   64 (116)
Q Consensus         2 ~vKi~Dfgls----~~~~~-~~~~~g~-~~~~p~~--------~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~---~   64 (116)
                      ++||+|||-.    .+..+ ..+.-|. -+..|++        ..|....|.||+|+.+||+..+.-|++...+..   .
T Consensus       213 HikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~K  292 (1317)
T KOG0612|consen  213 HIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGK  292 (1317)
T ss_pred             cEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHH
Confidence            6899999943    11111 1112233 2456664        236777899999999999999999988743333   2


Q ss_pred             Hhc-CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCC---HHHHH
Q psy12612         65 VRK-GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPD---FTTLK  107 (116)
Q Consensus        65 l~~-~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~---~~~i~  107 (116)
                      +.+ .....-|.  ...++.+..+||++-. .+|+.|-.   ..+|.
T Consensus       293 Im~hk~~l~FP~--~~~VSeeakdLI~~ll-~~~e~RLgrngiedik  336 (1317)
T KOG0612|consen  293 IMNHKESLSFPD--ETDVSEEAKDLIEALL-CDREVRLGRNGIEDIK  336 (1317)
T ss_pred             HhchhhhcCCCc--ccccCHHHHHHHHHHh-cChhhhcccccHHHHH
Confidence            322 12222231  1268899999999855 46676665   66554

>KOG0667|consensus

Probab=98.19  E-value=3.1e-07  Score=63.67  Aligned_cols=54  Identities=11%  Similarity=0.005  Sum_probs=38.9

Q ss_pred             eeecCCCCCCHHHH---HHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCC
Q psy12612          2 RVELSDLRILRDEI---VESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDF   57 (116)
Q Consensus         2 ~vKi~Dfgls~~~~---~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~   57 (116)
                      +|||.|||.|..+-   +..+++- -+-+||+   ..|+.+.||||||.++-|+..+ .|-|
T Consensus       329 ~vKVIDFGSSc~~~q~vytYiQSR-fYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG-~PLf  388 (586)
T KOG0667|consen  329 RIKVIDFGSSCFESQRVYTYIQSR-FYRAPEVILGLPYDTAIDMWSLGCILAELFTG-EPLF  388 (586)
T ss_pred             ceeEEecccccccCCcceeeeecc-ccccchhhccCCCCCccceeehhhhHHhHhcC-cccc
Confidence            69999999997542   2222221 2457887   4689999999999999998777 4544

>KOG0594|consensus

Probab=98.16  E-value=2.8e-06  Score=55.34  Aligned_cols=105  Identities=11%  Similarity=0.113  Sum_probs=60.8

Q ss_pred             eeecCCCCCCHHHHHH------HHhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHH---HH
Q psy12612          2 RVELSDLRILRDEIVE------SVRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEI---VE   63 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~------~~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~---~~   63 (116)
                      .+||+|||+++.....      .+.++ -+-+||+    ..|+...||||+|.++-|+..+ +|-|.     .++   .+
T Consensus       158 ~lKlaDFGlAra~~ip~~~yt~evvTl-WYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~-~~LFpG~se~~ql~~If~  235 (323)
T KOG0594|consen  158 VLKLADFGLARAFSIPMRTYTPEVVTL-WYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTR-RPLFPGDSEIDQLFRIFR  235 (323)
T ss_pred             cEeeeccchHHHhcCCcccccccEEEe-eccCHHHhcCCCcCCCCcchHhHHHHHHHHHhC-CCCCCCCcHHHHHHHHHH
Confidence            5799999999842210      01011 1334554    2488899999999999998764 34333     121   11


Q ss_pred             HHhcCCCC-------------CCCCCC-c-------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         64 SVRKGEKC-------------LRPSLS-E-------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        64 ~l~~~~~~-------------~~p~~~-~-------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .+......             .-|... +       ....++..+++..+...+|.+|-|.+..+.
T Consensus       236 ~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~  301 (323)
T KOG0594|consen  236 LLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT  301 (323)
T ss_pred             HcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc
Confidence            11110000             001111 0       012246788999999999999999887764

>KOG0196|consensus

Probab=98.14  E-value=3.5e-06  Score=60.44  Aligned_cols=53  Identities=25%  Similarity=0.686  Sum_probs=48.2

Q ss_pred             CCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         10 ILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        10 ls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ||+.++++.+..|||+..|.    +|+..+|.++.-||+.+-..||.|. ++...+.+
T Consensus       838 mSNQdVIkaIe~gyRLPpPm----DCP~aL~qLMldCWqkdR~~RP~F~-qiV~~lDk  890 (996)
T KOG0196|consen  838 MSNQDVIKAIEQGYRLPPPM----DCPAALYQLMLDCWQKDRNRRPKFA-QIVSTLDK  890 (996)
T ss_pred             cchHHHHHHHHhccCCCCCC----CCcHHHHHHHHHHHHHHhhcCCCHH-HHHHHHHH
Confidence            89999999999999999999    9999999999999999999999997 76665544

>KOG4158|consensus

Probab=98.13  E-value=2.5e-06  Score=57.30  Aligned_cols=106  Identities=15%  Similarity=0.201  Sum_probs=68.3

Q ss_pred             eecCCCC--CCHHHH-------HHHHhcC--CCCCCCCcCc---------ccCHHHHHHHHHHhcccCCCCCCCChH-HH
Q psy12612          3 VELSDLR--ILRDEI-------VESVRKG--EKCLRPNLSE---------LTCEEEVTAIMKRCWNEDPSERPDFTT-EI   61 (116)
Q Consensus         3 vKi~Dfg--ls~~~~-------~~~~~~g--~~~~~p~~~~---------~~~~~dv~s~g~~~we~~~~~~p~~~~-~~   61 (116)
                      +-|+|||  |+.+..       ...+..|  ..+++||+..         ...++|.|+.|.+.||++....|++.. +.
T Consensus       384 LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem  463 (598)
T KOG4158|consen  384 LVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM  463 (598)
T ss_pred             EEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh
Confidence            4689999  333211       1223333  2467787621         235799999999999999999898751 21


Q ss_pred             HHHHhcCCC-CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         62 VESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        62 ~~~l~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      .-..+. ++ ..-|.++. .||+.+.+|+..-+..||++|++..--.+.|
T Consensus       464 ~L~~r~-Yqe~qLPalp~-~vpp~~rqlV~~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  464 LLDTRT-YQESQLPALPS-RVPPVARQLVFDLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             eechhh-hhhhhCCCCcc-cCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence            111122 22 22343433 7999999999999999999999976444433

>KOG0670|consensus

Probab=98.11  E-value=2.1e-06  Score=59.17  Aligned_cols=52  Identities=10%  Similarity=-0.002  Sum_probs=35.2

Q ss_pred             eeecCCCCCCHH----HHHHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCC
Q psy12612          2 RVELSDLRILRD----EIVESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSER   54 (116)
Q Consensus         2 ~vKi~Dfgls~~----~~~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~   54 (116)
                      .+||||||-+..    ++...+.+- -+-+|++   ..|+++.|+||.|+++||+.+++-
T Consensus       575 iLKLCDfGSA~~~~eneitPYLVSR-FYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkI  633 (752)
T KOG0670|consen  575 ILKLCDFGSASFASENEITPYLVSR-FYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKI  633 (752)
T ss_pred             eeeeccCccccccccccccHHHHHH-hccCcceeecCcccCCccceeeceeeEEeeccce
Confidence            579999997642    222222111 1346775   468999999999999999877653

>KOG0607|consensus

Probab=98.10  E-value=1.8e-06  Score=56.33  Aligned_cols=104  Identities=12%  Similarity=0.133  Sum_probs=67.5

Q ss_pred             eecCCCCCCHHHHHH---------HHhc--C-CCCCCCCc--------CcccCHHHHHHHHHHhcccCCCCCCCCh----
Q psy12612          3 VELSDLRILRDEIVE---------SVRK--G-EKCLRPNL--------SELTCEEEVTAIMKRCWNEDPSERPDFT----   58 (116)
Q Consensus         3 vKi~Dfgls~~~~~~---------~~~~--g-~~~~~p~~--------~~~~~~~dv~s~g~~~we~~~~~~p~~~----   58 (116)
                      ||||||.|....-..         .+.+  | ...++|++        ..|+...|.||+|+++|-+.++--|+..    
T Consensus       218 vKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~  297 (463)
T KOG0607|consen  218 VKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGA  297 (463)
T ss_pred             eeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCC
Confidence            899999986421000         0111  1 13567775        2378889999999999977666544321    


Q ss_pred             --------------HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         59 --------------TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        59 --------------~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                                    +.+.+.+..|... -|.-....++.+..+|+..-+..++.+|-+..+++
T Consensus       298 dCGWdrGe~Cr~CQ~~LFesIQEGkYe-FPdkdWahIS~eakdlisnLlvrda~~rlsa~~vl  359 (463)
T KOG0607|consen  298 DCGWDRGEVCRVCQNKLFESIQEGKYE-FPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVL  359 (463)
T ss_pred             cCCccCCCccHHHHHHHHHHHhccCCc-CChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhcc
Confidence                          2566778877643 23222235777888999998889999998776654

>KOG4278|consensus

Probab=98.09  E-value=8.3e-06  Score=57.71  Aligned_cols=56  Identities=29%  Similarity=0.636  Sum_probs=47.0

Q ss_pred             cCCCCCCH------HHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHH
Q psy12612          5 LSDLRILR------DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESV   65 (116)
Q Consensus         5 i~Dfgls~------~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l   65 (116)
                      |+-+||+.      .+++..+..|||+..|+    .|+..||.++..||...|..||.|. ++..++
T Consensus       459 IATYGMsPYPGidlSqVY~LLEkgyRM~~Pe----GCPpkVYeLMraCW~WsPsDRPsFa-eiHqaf  520 (1157)
T KOG4278|consen  459 IATYGMSPYPGIDLSQVYGLLEKGYRMDGPE----GCPPKVYELMRACWNWSPSDRPSFA-EIHQAF  520 (1157)
T ss_pred             HHhcCCCCCCCccHHHHHHHHhccccccCCC----CCCHHHHHHHHHHhcCCcccCccHH-HHHHHH
Confidence            56677774      56788889999999999    9999999999999999999999996 444433

>KOG0600|consensus

Probab=98.08  E-value=2.4e-06  Score=58.37  Aligned_cols=105  Identities=9%  Similarity=0.083  Sum_probs=61.9

Q ss_pred             eeecCCCCCCHHHHHHH---HhcC--CC-CCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHH--HHH
Q psy12612          2 RVELSDLRILRDEIVES---VRKG--EK-CLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEI--VES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g--~~-~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~--~~~   64 (116)
                      .+||+||||++.-....   +...  .. +-.||+    ..|+...|+||.|.++-|++.++ |-+.     +|+  +..
T Consensus       256 ~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gk-PI~~G~tEveQl~kIfk  334 (560)
T KOG0600|consen  256 VLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGK-PILQGRTEVEQLHKIFK  334 (560)
T ss_pred             CEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCC-CCcCCccHHHHHHHHHH
Confidence            58999999997311110   1111  11 224565    35889999999999999987764 4332     111  111


Q ss_pred             Hh-cC------------CCCCCCCCCc--------cchHHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         65 VR-KG------------EKCLRPSLSE--------LTCEEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        65 l~-~~------------~~~~~p~~~~--------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                      +. ..            ....+|..+-        ...+....+|+...+..||++|.|..+.+
T Consensus       335 lcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL  398 (560)
T KOG0600|consen  335 LCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSAL  398 (560)
T ss_pred             HhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHh
Confidence            11 00            0011221110        13556677899999999999999988765

>KOG1290|consensus

Probab=98.01  E-value=4.5e-06  Score=56.97  Aligned_cols=53  Identities=13%  Similarity=0.211  Sum_probs=37.2

Q ss_pred             CeeecCCCCCCHH---HHHHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCC
Q psy12612          1 MRVELSDLRILRD---EIVESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSER   54 (116)
Q Consensus         1 ~~vKi~Dfgls~~---~~~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~   54 (116)
                      ++|||+|||=+..   ....-+++- -+-+||+   ..|++++||||++.++||+.++..
T Consensus       391 i~vKIaDlGNACW~~khFT~DIQTR-QYRapEVllGsgY~~~ADiWS~AC~~FELaTGDy  449 (590)
T KOG1290|consen  391 IRVKIADLGNACWVHKHFTEDIQTR-QYRAPEVLLGSGYSTSADIWSTACMAFELATGDY  449 (590)
T ss_pred             eeEEEeeccchhhhhhhhchhhhhh-hccCcceeecCCCCCchhHHHHHHHHHHhhcCce
Confidence            5899999997653   222333321 2345665   458999999999999999877653

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.01  E-value=7e-06  Score=56.99  Aligned_cols=71  Identities=11%  Similarity=-0.088  Sum_probs=42.9

Q ss_pred             HHHHHHHHHhcccCCCCCCCCh------HHH------HHHHhcCCCCCCCCCC-ccchHHHHHHHHHHhccCCC---CCC
Q psy12612         37 EEVTAIMKRCWNEDPSERPDFT------TEI------VESVRKGEKCLRPSLS-ELTCEEEVTAIMKRCWNEDP---SER  100 (116)
Q Consensus        37 ~dv~s~g~~~we~~~~~~p~~~------~~~------~~~l~~~~~~~~p~~~-~~~~~~~l~~l~~~Cw~~~p---~~R  100 (116)
                      .|+||+|++++++.....+.+.      .+.      ....+. .......++ .+.+++..++|+.++...+|   .+|
T Consensus       413 ~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~-~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~R  491 (507)
T PLN03224        413 FDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM-YKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGR  491 (507)
T ss_pred             cchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh-hcccCCCcccccccChHHHHHHHHHhccCCCCcccC
Confidence            5999999999998765542221      011      000000 011111222 12467888999999998765   689


Q ss_pred             CCHHHHHH
Q psy12612        101 PDFTTLKA  108 (116)
Q Consensus       101 p~~~~i~~  108 (116)
                      +|.++++.
T Consensus       492 lSa~eaL~  499 (507)
T PLN03224        492 LSVGQALS  499 (507)
T ss_pred             CCHHHHhC
Confidence            99999864

>KOG0695|consensus

Probab=97.94  E-value=6.9e-06  Score=54.17  Aligned_cols=95  Identities=15%  Similarity=0.219  Sum_probs=59.8

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----------HHHH-
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----------TEIV-   62 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----------~~~~-   62 (116)
                      ++|++|+||.++.+..     .......+.+|++   .+|..+.|.|++|+.++|+..++.|.--          ++.+ 
T Consensus       389 hikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylf  468 (593)
T KOG0695|consen  389 HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLF  468 (593)
T ss_pred             ceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHH
Confidence            5899999998765321     1111224667876   3577889999999999999888776311          1222 


Q ss_pred             HH-HhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCC
Q psy12612         63 ES-VRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPD  102 (116)
Q Consensus        63 ~~-l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~  102 (116)
                      .. +++..|.++      ..+-....+++.-++.||.+|-.
T Consensus       469 qvilekqiripr------slsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  469 QVILEKQIRIPR------SLSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             HHHhhhcccccc------eeehhhHHHHHHhhcCCcHHhcC
Confidence            22 233333322      33334456777888899998854

>KOG0603|consensus

Probab=97.94  E-value=7.1e-06  Score=57.24  Aligned_cols=95  Identities=13%  Similarity=0.221  Sum_probs=65.1

Q ss_pred             eeecCCCCCCHHHHHHHHhcC-CCCCCCCcCc-ccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCCCCCCcc
Q psy12612          2 RVELSDLRILRDEIVESVRKG-EKCLRPNLSE-LTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPSLSEL   79 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g-~~~~~p~~~~-~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~p~~~~~   79 (116)
                      ++|+.|||+++..+...+..| +.+++|++.. .....|.|+||++.+++..+.-|... ++...+...... -|.    
T Consensus       135 hi~~tdfglske~v~~~~~cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~-~~~~~Il~~~~~-~p~----  208 (612)
T KOG0603|consen  135 HIKLTDFGLSKEAVKEKIACGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG-DTMKRILKAELE-MPR----  208 (612)
T ss_pred             ccccCCchhhhHhHhhhhcccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch-HHHHHHhhhccC-Cch----
Confidence            589999999997766555444 4677888743 46678999999999999999888775 666666543321 222    


Q ss_pred             chHHHHHHHHHHhccCCCCCCCC
Q psy12612         80 TCEEEVTAIMKRCWNEDPSERPD  102 (116)
Q Consensus        80 ~~~~~l~~l~~~Cw~~~p~~Rp~  102 (116)
                      ........++..-...+|..|--
T Consensus       209 ~l~~~a~~~~~~l~~r~p~nrLg  231 (612)
T KOG0603|consen  209 ELSAEARSLFRQLFKRNPENRLG  231 (612)
T ss_pred             hhhHHHHHHHHHHHhhCHHHHhc
Confidence            45555566666666666655543

>KOG4250|consensus

Probab=97.92  E-value=1.1e-06  Score=61.89  Aligned_cols=55  Identities=18%  Similarity=0.212  Sum_probs=38.2

Q ss_pred             eecCCCCCCHHHHHH-HHh--cCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCC
Q psy12612          3 VELSDLRILRDEIVE-SVR--KGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDF   57 (116)
Q Consensus         3 vKi~Dfgls~~~~~~-~~~--~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~   57 (116)
                      =||+|||.++.--.. ...  -|. .+..|++    ..|+...|.||||+++|+..++.+|+-
T Consensus       163 yKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~  225 (732)
T KOG4250|consen  163 YKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI  225 (732)
T ss_pred             EeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence            499999999741110 111  132 3566765    347888999999999999999998853

>KOG1033|consensus

Probab=97.91  E-value=7.2e-06  Score=56.18  Aligned_cols=100  Identities=13%  Similarity=0.194  Sum_probs=58.7

Q ss_pred             eeecCCCCCCHHHH---------HHHH-hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-HHHHHHHh
Q psy12612          2 RVELSDLRILRDEI---------VESV-RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~---------~~~~-~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-~~~~~~l~   66 (116)
                      .+||+||||.....         ..+. ..|. .++.|+-   ..|+.+.|||++|.+++|+...-...+. ......++
T Consensus       394 q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r  473 (516)
T KOG1033|consen  394 QLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIR  473 (516)
T ss_pred             hhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhh
Confidence            47999999853211         1111 1232 4667763   4588999999999999986542111121 12334455


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTT  105 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~  105 (116)
                      .|..   |+.-..+.| +-+.++++..+..|.+||++.+
T Consensus       474 ~g~i---p~~~~~d~p-~e~~ll~~lls~~p~~RP~~~~  508 (516)
T KOG1033|consen  474 DGII---PPEFLQDYP-EEYTLLQQLLSPSPEERPSAIE  508 (516)
T ss_pred             cCCC---ChHHhhcCc-HHHHHHHHhcCCCcccCchHHH
Confidence            5542   211111333 3467999999999999995543

>KOG0200|consensus

Probab=97.78  E-value=7.7e-05  Score=53.07  Aligned_cols=51  Identities=39%  Similarity=0.903  Sum_probs=42.9

Q ss_pred             HHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         12 RDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        12 ~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ..++...+..|+++.+|+    .|..++|.++..||...|..||+|. ++...+..
T Consensus       528 ~~~l~~~l~~G~r~~~P~----~c~~eiY~iM~~CW~~~p~~RP~F~-~~~~~~~~  578 (609)
T KOG0200|consen  528 TEELLEFLKEGNRMEQPE----HCSDEIYDLMKSCWNADPEDRPTFS-ECVEFFEK  578 (609)
T ss_pred             HHHHHHHHhcCCCCCCCC----CCCHHHHHHHHHHhCCCcccCCCHH-HHHHHHHH
Confidence            445667888999999999    9999999999999999999999997 55554443

>KOG1024|consensus

Probab=97.71  E-value=9.6e-05  Score=49.78  Aligned_cols=50  Identities=28%  Similarity=0.622  Sum_probs=42.8

Q ss_pred             HHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         12 RDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        12 ~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+....+..|+|+..|.    +|+..+|..+..||...|.+||+|. ++...+.
T Consensus       504 PfEm~~ylkdGyRlaQP~----NCPDeLf~vMacCWallpeeRPsf~-Qlv~cLs  553 (563)
T KOG1024|consen  504 PFEMEHYLKDGYRLAQPF----NCPDELFTVMACCWALLPEERPSFS-QLVICLS  553 (563)
T ss_pred             HHHHHHHHhccceecCCC----CCcHHHHHHHHHHHhcCcccCCCHH-HHHHHHH
Confidence            455667788899999998    9999999999999999999999996 7665554

>KOG4257|consensus

Probab=97.67  E-value=2.1e-05  Score=55.63  Aligned_cols=46  Identities=28%  Similarity=0.771  Sum_probs=39.1

Q ss_pred             CCCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCCh
Q psy12612          9 RILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFT   58 (116)
Q Consensus         9 gls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~   58 (116)
                      |+.+.+++..+..|.|+..|+    +|+.-+|+++..||..+|.+||.|.
T Consensus       595 gvkNsDVI~~iEnGeRlP~P~----nCPp~LYslmskcWayeP~kRPrft  640 (974)
T KOG4257|consen  595 GVKNSDVIGHIENGERLPCPP----NCPPALYSLMSKCWAYEPSKRPRFT  640 (974)
T ss_pred             cccccceEEEecCCCCCCCCC----CCChHHHHHHHHHhccCcccCCcHH
Confidence            445555666677788888888    9999999999999999999999996

>KOG1025|consensus

Probab=97.64  E-value=0.00015  Score=52.91  Aligned_cols=53  Identities=34%  Similarity=0.657  Sum_probs=45.1

Q ss_pred             CCCCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHH
Q psy12612          8 LRILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESV   65 (116)
Q Consensus         8 fgls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l   65 (116)
                      ||++..++.+.+..|.|+..|+    .|..|||..++.||.+++..||.|. ++...+
T Consensus       902 ~gi~~~eI~dlle~geRLsqPp----iCtiDVy~~mvkCwmid~~~rp~fk-el~~~f  954 (1177)
T KOG1025|consen  902 DGIPAEEIPDLLEKGERLSQPP----ICTIDVYMVMVKCWMIDADSRPTFK-ELAEEF  954 (1177)
T ss_pred             CCCCHHHhhHHHhccccCCCCC----CccHHHHHHHHHHhccCcccCccHH-HHHHHH
Confidence            4577788888888999999999    9999999999999999999999996 544433

>KOG0669|consensus

Probab=97.63  E-value=9.1e-05  Score=47.28  Aligned_cols=26  Identities=19%  Similarity=0.335  Sum_probs=21.8

Q ss_pred             HHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         83 EEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        83 ~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ++..+||......||.+|+...+..+
T Consensus       289 ~~a~dLle~ll~~DP~kR~~ad~aln  314 (376)
T KOG0669|consen  289 DEALDLLEKLLKLDPTKRIDADQALN  314 (376)
T ss_pred             hhHHHHHHHHhccCcccCcchHhhhc
Confidence            35668999999999999999887754

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=97.57  E-value=3.9e-05  Score=46.99  Aligned_cols=55  Identities=15%  Similarity=0.079  Sum_probs=34.7

Q ss_pred             eeecCCCCCCHHHHHH------HHhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCC
Q psy12612          2 RVELSDLRILRDEIVE------SVRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPD   56 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~------~~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~   56 (116)
                      ++||+|||++......      .......+..|+.    ..++.++|+|+||+++|++..+..|.
T Consensus       136 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf  200 (225)
T smart00221      136 LVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPF  200 (225)
T ss_pred             CEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCc
Confidence            5899999987532111      0111112344443    23466899999999999998876654

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0610|consensus

Probab=97.56  E-value=0.00021  Score=48.14  Aligned_cols=73  Identities=14%  Similarity=0.122  Sum_probs=50.7

Q ss_pred             CCCCCcCc---ccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH-hcCCC-CCCCCCCccchHHHHHHHHHHhccCC
Q psy12612         25 CLRPNLSE---LTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV-RKGEK-CLRPSLSELTCEEEVTAIMKRCWNED   96 (116)
Q Consensus        25 ~~~p~~~~---~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l-~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~   96 (116)
                      +.+||+-.   -....|.|+||+.+||+..+.-|+-.   ++.+.+| .+... +..|     .......+||++-+..|
T Consensus       301 YlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~-----~vs~~akDLIr~LLvKd  375 (459)
T KOG0610|consen  301 YLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP-----EVSSAAKDLIRKLLVKD  375 (459)
T ss_pred             cccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC-----cchhHHHHHHHHHhccC
Confidence            55666521   24568999999999999988877543   2444443 33222 2222     46688899999999999


Q ss_pred             CCCCCC
Q psy12612         97 PSERPD  102 (116)
Q Consensus        97 p~~Rp~  102 (116)
                      |.+|-.
T Consensus       376 P~kRlg  381 (459)
T KOG0610|consen  376 PSKRLG  381 (459)
T ss_pred             hhhhhc
Confidence            999988

>KOG0606|consensus

Probab=97.54  E-value=7.5e-05  Score=55.40  Aligned_cols=97  Identities=13%  Similarity=0.132  Sum_probs=63.4

Q ss_pred             eeecCCCCCCHHHHH----------------HHHhcC---C-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh
Q psy12612          2 RVELSDLRILRDEIV----------------ESVRKG---E-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----------------~~~~~g---~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~   58 (116)
                      ++|++||||+.....                +...++   . .+.+|++   .-|..+.|.|++|++.||..-+..|.|.
T Consensus       181 hiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffG  260 (1205)
T KOG0606|consen  181 HIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG  260 (1205)
T ss_pred             cccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccC
Confidence            579999998853211                111111   1 2445554   2377889999999999999998888876


Q ss_pred             ---HHHHHHHhcCCC--CCCCCCCccchHHHHHHHHHHhccCCCCCCCC
Q psy12612         59 ---TEIVESVRKGEK--CLRPSLSELTCEEEVTAIMKRCWNEDPSERPD  102 (116)
Q Consensus        59 ---~~~~~~l~~~~~--~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~  102 (116)
                         ++++..+-....  ++.-    ...+++...++.+-+..+|..|--
T Consensus       261 dtpeelfg~visd~i~wpE~d----ea~p~Ea~dli~~LL~qnp~~Rlg  305 (1205)
T KOG0606|consen  261 DTPEELFGQVISDDIEWPEED----EALPPEAQDLIEQLLRQNPLCRLG  305 (1205)
T ss_pred             CCHHHHHhhhhhhhccccccC----cCCCHHHHHHHHHHHHhChHhhcc
Confidence               244444433222  2221    146788899999999999988854

>KOG0664|consensus

Probab=97.48  E-value=1.6e-05  Score=51.13  Aligned_cols=48  Identities=13%  Similarity=0.005  Sum_probs=31.4

Q ss_pred             eeecCCCCCCHHHHHH-------HHhcCCCCCCCCc----CcccCHHHHHHHHHHhcccC
Q psy12612          2 RVELSDLRILRDEIVE-------SVRKGEKCLRPNL----SELTCEEEVTAIMKRCWNED   50 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-------~~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~   50 (116)
                      .+|||||||++.+-..       .+.+. .+-+||+    ..|+...||||.|.++=|+.
T Consensus       194 vLKICDFGLARvee~d~~~hMTqEVVTQ-YYRAPEiLMGaRhYs~AvDiWSVGCIFaELL  252 (449)
T KOG0664|consen  194 ILKICDFGLARTWDQRDRLNMTHEVVTQ-YYRAPELLMGARRYTGAVDIWSVGCIFAELL  252 (449)
T ss_pred             eEEecccccccccchhhhhhhHHHHHHH-HhccHHHhhcchhhcCccceehhhHHHHHHH
Confidence            4799999999743211       11111 2345665    34788999999998876643

>KOG0199|consensus

Probab=97.46  E-value=0.00033  Score=50.44  Aligned_cols=48  Identities=35%  Similarity=0.814  Sum_probs=41.5

Q ss_pred             CCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHH
Q psy12612         10 ILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIV   62 (116)
Q Consensus        10 ls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~   62 (116)
                      ....++.+.+..|.++.+|+    .|+.|||+++..||...+..||+|. .+.
T Consensus       319 ~~g~qIL~~iD~~erLpRPk----~csedIY~imk~cWah~paDRptFs-air  366 (1039)
T KOG0199|consen  319 CRGIQILKNIDAGERLPRPK----YCSEDIYQIMKNCWAHNPADRPTFS-AIR  366 (1039)
T ss_pred             CCHHHHHHhccccccCCCCC----CChHHHHHHHHHhccCCccccccHH-HHH
Confidence            44556778888888999999    9999999999999999999999997 443

>KOG1095|consensus

Probab=97.25  E-value=0.00066  Score=50.66  Aligned_cols=50  Identities=34%  Similarity=0.690  Sum_probs=40.8

Q ss_pred             CCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHH
Q psy12612         10 ILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVES   64 (116)
Q Consensus        10 ls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~   64 (116)
                      .++.++...+..|.|+..|.    .|+..+|.++..||...|..||+|. .+++.
T Consensus       908 ~~n~~v~~~~~~ggRL~~P~----~CP~~ly~lM~~CW~~~pe~RP~F~-~i~~q  957 (1025)
T KOG1095|consen  908 RSNFEVLLDVLEGGRLDPPS----YCPEKLYQLMLQCWKHDPEDRPSFR-TIVEQ  957 (1025)
T ss_pred             cchHHHHHHHHhCCccCCCC----CCChHHHHHHHHHccCChhhCccHH-HHHhh
Confidence            34566766666666999998    9999999999999999999999996 45443

>KOG0666|consensus

Probab=97.22  E-value=0.0001  Score=48.33  Aligned_cols=49  Identities=22%  Similarity=0.087  Sum_probs=31.9

Q ss_pred             eeecCCCCCCHHHH--HHHHhcCC------CCCCCCc----CcccCHHHHHHHHHHhcccC
Q psy12612          2 RVELSDLRILRDEI--VESVRKGE------KCLRPNL----SELTCEEEVTAIMKRCWNED   50 (116)
Q Consensus         2 ~vKi~Dfgls~~~~--~~~~~~g~------~~~~p~~----~~~~~~~dv~s~g~~~we~~   50 (116)
                      +|||+||||++.-.  .....++.      -+-+||+    ..|+...|||++|.+.=|+.
T Consensus       174 ~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElL  234 (438)
T KOG0666|consen  174 RVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELL  234 (438)
T ss_pred             eeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHH
Confidence            79999999998421  11111111      1346775    34889999999999876643

>KOG0590|consensus

Probab=97.19  E-value=0.00038  Score=49.59  Aligned_cols=107  Identities=14%  Similarity=0.067  Sum_probs=62.3

Q ss_pred             eeecCCCCCCHH-----HHHHHHhcC----CCCCCCCc---Cccc-CHHHHHHHHHHhcccCCCCCCCCh----H-HHHH
Q psy12612          2 RVELSDLRILRD-----EIVESVRKG----EKCLRPNL---SELT-CEEEVTAIMKRCWNEDPSERPDFT----T-EIVE   63 (116)
Q Consensus         2 ~vKi~Dfgls~~-----~~~~~~~~g----~~~~~p~~---~~~~-~~~dv~s~g~~~we~~~~~~p~~~----~-~~~~   63 (116)
                      .+||+|||.+.-     +-......|    ..+.+||.   .+|. -..||||.|+.+..+..++.|.-.    . +...
T Consensus       458 ~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~  537 (601)
T KOG0590|consen  458 ILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT  537 (601)
T ss_pred             ceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh
Confidence            589999997631     110112222    23556775   2343 357999999998777666555321    0 1011


Q ss_pred             HHhcCCC-CC-CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         64 SVRKGEK-CL-RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        64 ~l~~~~~-~~-~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ....+.+ .. -|.-.....+.+...+|.+-++.+|.+|-+.++|+.
T Consensus       538 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  538 NNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             hccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            1111111 11 111011257788899999999999999999999975

>KOG0662|consensus

Probab=96.96  E-value=0.0014  Score=39.98  Aligned_cols=106  Identities=11%  Similarity=0.132  Sum_probs=59.5

Q ss_pred             eeecCCCCCCHHHHH--HHHhcC--CCCCCC-Cc----CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHH---HHH
Q psy12612          2 RVELSDLRILRDEIV--ESVRKG--EKCLRP-NL----SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEI---VES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~~g--~~~~~p-~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~---~~~   64 (116)
                      .+|++|||+++.--+  ......  .-+.+| .+    .-|+.+.|+||-|.++=|+....+|-|.     .++   ...
T Consensus       139 elkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~  218 (292)
T KOG0662|consen  139 ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL  218 (292)
T ss_pred             cEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHH
Confidence            479999999974211  011000  112233 22    3478999999999999998888888664     122   222


Q ss_pred             HhcCCCCCCCCC------------Cc----cc----hHHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         65 VRKGEKCLRPSL------------SE----LT----CEEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        65 l~~~~~~~~p~~------------~~----~~----~~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                      +........|.+            ++    +.    .+..=.+|+++-...+|.+|-+.++.+
T Consensus       219 lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaal  281 (292)
T KOG0662|consen  219 LGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAAL  281 (292)
T ss_pred             hCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHh
Confidence            222111111211            11    11    112235677888888899998877654

>KOG0665|consensus

Probab=96.92  E-value=0.00019  Score=46.94  Aligned_cols=48  Identities=8%  Similarity=0.041  Sum_probs=33.4

Q ss_pred             eeecCCCCCCHHHHHHHHhcCC---C-CCCCCc---CcccCHHHHHHHHHHhccc
Q psy12612          2 RVELSDLRILRDEIVESVRKGE---K-CLRPNL---SELTCEEEVTAIMKRCWNE   49 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g~---~-~~~p~~---~~~~~~~dv~s~g~~~we~   49 (116)
                      .+||+|||+++.+-.....+.+   | +-+|++   ..|....||||.|.++=|+
T Consensus       156 ~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEl  210 (369)
T KOG0665|consen  156 TLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL  210 (369)
T ss_pred             heeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHH
Confidence            4799999999876444333333   2 346775   2377889999999988664

>KOG0608|consensus

Probab=96.51  E-value=0.0022  Score=46.05  Aligned_cols=34  Identities=9%  Similarity=0.030  Sum_probs=26.1

Q ss_pred             CCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh
Q psy12612         25 CLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT   58 (116)
Q Consensus        25 ~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~   58 (116)
                      +.+||+   .-|+..+|.|+.|++++|+.-++-|+.+
T Consensus       837 yiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~  873 (1034)
T KOG0608|consen  837 YIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLA  873 (1034)
T ss_pred             ccChHHhcccCccccchhhHhhHHHHHHhhCCCCccC
Confidence            556665   2377889999999999999888766543

>KOG0668|consensus

Probab=96.50  E-value=0.0028  Score=40.20  Aligned_cols=106  Identities=15%  Similarity=0.106  Sum_probs=62.5

Q ss_pred             eecCCCCCCHHHHH---HHHhcCCCCC-CCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHH--------
Q psy12612          3 VELSDLRILRDEIV---ESVRKGEKCL-RPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEI--------   61 (116)
Q Consensus         3 vKi~Dfgls~~~~~---~~~~~g~~~~-~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~--------   61 (116)
                      ++|-|.||+..-..   ..+....|+. -||+    ..|+.+-|+||||..+=++.-.+.|+|.     .++        
T Consensus       172 LrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLG  251 (338)
T KOG0668|consen  172 LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLG  251 (338)
T ss_pred             eeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhC
Confidence            57889999842110   1122223333 3664    4578889999999988777777777663     111        


Q ss_pred             ----HHHHhcCCCCCCCCC----------------Cc---cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         62 ----VESVRKGEKCLRPSL----------------SE---LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        62 ----~~~l~~~~~~~~p~~----------------~~---~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                          ..-+.+-.....|.+                .+   .-.+++..+++.+-+..|-.+|+|.+|.+.
T Consensus       252 t~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  252 TDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             hHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence                111111110111111                11   124477888999999999999999988764

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=96.31  E-value=0.0065  Score=38.50  Aligned_cols=49  Identities=31%  Similarity=0.896  Sum_probs=33.9

Q ss_pred             CHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHH
Q psy12612         11 LRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVES   64 (116)
Q Consensus        11 s~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~   64 (116)
                      ...++...+..+.++..|.    .++.+++++...||..+|.+||++. ++...
T Consensus       210 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~C~~~~p~~RPs~~-~i~~~  258 (259)
T PF07714_consen  210 DNEEIIEKLKQGQRLPIPD----NCPKDIYSLIQQCWSHDPEKRPSFQ-EILQE  258 (259)
T ss_dssp             CHHHHHHHHHTTEETTSBT----TSBHHHHHHHHHHT-SSGGGS--HH-HHHHH
T ss_pred             ccccccccccccccceecc----chhHHHHHHHHHHcCCChhhCcCHH-HHHhc
Confidence            4445555565666555555    7889999999999999999999995 66654

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG1240|consensus

Probab=95.70  E-value=0.019  Score=43.86  Aligned_cols=76  Identities=17%  Similarity=0.078  Sum_probs=51.7

Q ss_pred             ccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCCCCCCccc-hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy12612         33 LTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPSLSELT-CEEEVTAIMKRCWNEDPSERPDFTTLKAA  109 (116)
Q Consensus        33 ~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~p~~~~~~-~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~  109 (116)
                      .+.+-||+|.|...-|++..++|.|...-+-..+.|.. ..|..-... -+..+.+|+....+.||++|-+..+.+..
T Consensus       215 L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~-~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  215 LTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNA-DDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             cChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCc-cCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            36678999999999999999999885222223344432 111100001 12368899999999999999999887654

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=95.68  E-value=0.046  Score=34.87  Aligned_cols=52  Identities=35%  Similarity=0.707  Sum_probs=36.5

Q ss_pred             CCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         10 ILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        10 ls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .+..++...+..+.....|.    .++..++.+...||..++.+||++. ++...+.
T Consensus       230 ~~~~~~~~~i~~~~~~~~~~----~~~~~~~~l~~~c~~~~p~~Rp~~~-~i~~~l~  281 (283)
T cd05048         230 FSNQEVIEMIRSRQLLPCPE----DCPARVYALMIECWNEIPARRPRFK-DIHTRLR  281 (283)
T ss_pred             CCHHHHHHHHHcCCcCCCcc----cCCHHHHHHHHHHccCChhhCcCHH-HHHHHHh
Confidence            34444444444444333333    6778999999999999999999996 7877764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0192|consensus

Probab=95.68  E-value=0.052  Score=36.64  Aligned_cols=41  Identities=39%  Similarity=0.826  Sum_probs=32.1

Q ss_pred             cCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         21 KGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        21 ~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .+.|+..|.    .+...+.+++..||..++..||+|. ++...+.
T Consensus       261 ~~~Rp~~p~----~~~~~l~~l~~~CW~~dp~~RP~f~-ei~~~l~  301 (362)
T KOG0192|consen  261 GGLRPPIPK----ECPPHLSSLMERCWLVDPSRRPSFL-EIVSRLE  301 (362)
T ss_pred             cCCCCCCCc----cCCHHHHHHHHHhCCCCCCcCCCHH-HHHHHHH
Confidence            445555555    6889999999999999999999996 6655444

>KOG1152|consensus

Probab=95.67  E-value=0.0055  Score=43.54  Aligned_cols=56  Identities=13%  Similarity=0.052  Sum_probs=35.6

Q ss_pred             eeecCCCCCCHHHHH---HHHhcCCCCCCCCcC---cc-cCHHHHHHHHHHhcccCCCCCCCC
Q psy12612          2 RVELSDLRILRDEIV---ESVRKGEKCLRPNLS---EL-TCEEEVTAIMKRCWNEDPSERPDF   57 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~---~~~~~g~~~~~p~~~---~~-~~~~dv~s~g~~~we~~~~~~p~~   57 (116)
                      -|||-|||-+...-.   ........+.+||+.   .| ..+-|||++|+.+|-+...+.|.+
T Consensus       708 ~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  708 FVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             eEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            379999998742100   000011135677762   22 456799999999999888887765

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=94.89  E-value=0.13  Score=32.77  Aligned_cols=32  Identities=44%  Similarity=0.867  Sum_probs=27.9

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++..+..+...||+.+|.+||++. ++...++
T Consensus       250 ~~~~~~~~li~~cl~~~p~~RP~~~-~i~~~l~  281 (283)
T cd05091         250 DCPAWVYTLMLECWNEFPSRRPRFK-DIHSRLR  281 (283)
T ss_pred             CCCHHHHHHHHHHhCCCcccCCCHH-HHHHHhh
Confidence            6788899999999999999999996 7777664

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=94.60  E-value=0.19  Score=31.91  Aligned_cols=32  Identities=28%  Similarity=0.762  Sum_probs=27.1

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++..+..+...||...+.+||++. ++...+.
T Consensus       232 ~~~~~~~~li~~c~~~~p~~RP~~~-~i~~~l~  263 (266)
T cd05064         232 NCPNLLHQLMLDCWQKERGERPRFS-QIHSILS  263 (266)
T ss_pred             CCCHHHHHHHHHHcCCCchhCCCHH-HHHHHHH
Confidence            6778899999999999999999995 7776654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=94.59  E-value=0.19  Score=31.59  Aligned_cols=33  Identities=33%  Similarity=0.716  Sum_probs=28.3

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .++.+++.+...||..++..||++. .+...+.+
T Consensus       222 ~~~~~l~~li~~~~~~~p~~Rp~~~-~i~~~l~~  254 (257)
T cd05116         222 RCPPEMYDLMKLCWTYGVDERPGFA-VVELRLRN  254 (257)
T ss_pred             CCCHHHHHHHHHHhccCchhCcCHH-HHHHHHhc
Confidence            5778999999999999999999996 77776654

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=94.56  E-value=0.21  Score=32.02  Aligned_cols=32  Identities=34%  Similarity=0.834  Sum_probs=26.7

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+..++.++..||...|.+||++. ++...++
T Consensus       256 ~~~~~l~~li~~~l~~~p~~Rpt~~-el~~~l~  287 (288)
T cd05050         256 NCPLELYNLMRLCWSKLPSDRPSFA-SINRILQ  287 (288)
T ss_pred             CCCHHHHHHHHHHcccCcccCCCHH-HHHHHhh
Confidence            5667899999999999999999986 7776554

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=94.52  E-value=0.17  Score=31.91  Aligned_cols=33  Identities=36%  Similarity=0.798  Sum_probs=28.1

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .+..+++.+...||...+.+||++. ++...++.
T Consensus       222 ~~~~~l~~li~~c~~~~~~~Rp~~~-~i~~~l~~  254 (257)
T cd05115         222 ECPPEMYALMKDCWIYKWEDRPNFA-KVEERMRT  254 (257)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHhh
Confidence            6678999999999999999999996 77776654

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=94.14  E-value=0.19  Score=31.94  Aligned_cols=107  Identities=13%  Similarity=0.120  Sum_probs=60.4

Q ss_pred             eeecCCCCCCHHHHH----------HHHhcCC-CCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCCh------
Q psy12612          2 RVELSDLRILRDEIV----------ESVRKGE-KCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFT------   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----------~~~~~g~-~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~------   58 (116)
                      .+|++|||+++....          .....|. .+..|+.      ..++...|+|++|+.+++...+..|...      
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~  219 (384)
T COG0515         140 VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSA  219 (384)
T ss_pred             eEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcccc
Confidence            479999998752110          0111121 2344542      1346789999999998887666655211      


Q ss_pred             -HHHHHHHhcCCCC-CCCCCCc---cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         59 -TEIVESVRKGEKC-LRPSLSE---LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        59 -~~~~~~l~~~~~~-~~p~~~~---~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       .+....+...... ..+....   ......+.+++..|...+|..|.+......
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  274 (384)
T COG0515         220 TSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS  274 (384)
T ss_pred             HHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence             1233333332211 1111111   011256789999999999999999876554

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=94.10  E-value=0.012  Score=38.41  Aligned_cols=61  Identities=13%  Similarity=0.043  Sum_probs=36.1

Q ss_pred             ccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc-CCCCCCCCCCccchHHHHHHHHHHhccCCCCCC
Q psy12612         33 LTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK-GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSER  100 (116)
Q Consensus        33 ~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~-~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~R  100 (116)
                      ++.+.|.|++|+.+|.+..+..|.-. ........ .....+      +.|+.+..||..-+..+|.+|
T Consensus       227 ~t~~~DaW~LG~~ly~lWC~~lPf~~-~~~~~~~~~~f~~C~------~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  227 YTFATDAWQLGITLYSLWCGRLPFGL-SSPEADPEWDFSRCR------DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             E-HHHHHHHHHHHHHHHHHSS-STCC-CGGGSTSGGGGTTSS---------HHHHHHHHHHT-SSGGGS
T ss_pred             eeeccCHHHHHHHHHHHHHccCCCCC-CCccccccccchhcC------CcCHHHHHHHHHHccCCcccC
Confidence            57788999999999887777666432 00000000 001111      478889999999999999887

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=94.07  E-value=0.23  Score=31.73  Aligned_cols=33  Identities=30%  Similarity=0.743  Sum_probs=27.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .+..+++.++..||...|..||++. ++...+..
T Consensus       235 ~~~~~~~~li~~c~~~~p~~Rps~~-el~~~l~~  267 (279)
T cd05111         235 ICTIDVYMVMVKCWMIDENVRPTFK-ELANEFTR  267 (279)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHH
Confidence            5678999999999999999999996 66665544

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0194|consensus

Probab=93.89  E-value=0.32  Score=34.17  Aligned_cols=55  Identities=24%  Similarity=0.591  Sum_probs=43.8

Q ss_pred             CCCCHHHHHHHH-hcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612          8 LRILRDEIVESV-RKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus         8 fgls~~~~~~~~-~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .|+...++...+ ..++++..|.    ..+.++..+...||...+..||++. ++...+..
T Consensus       364 ~g~~~~~v~~kI~~~~~r~~~~~----~~p~~~~~~~~~c~~~~p~~R~tm~-~i~~~l~~  419 (474)
T KOG0194|consen  364 PGMKNYEVKAKIVKNGYRMPIPS----KTPKELAKVMKQCWKKDPEDRPTMS-TIKKKLEA  419 (474)
T ss_pred             CCCCHHHHHHHHHhcCccCCCCC----CCHHHHHHHHHHhccCChhhccCHH-HHHHHHHH
Confidence            356666777777 6788888887    8899999999999999999999996 55555544

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=93.41  E-value=0.44  Score=30.43  Aligned_cols=32  Identities=38%  Similarity=0.933  Sum_probs=26.8

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .+..++.+++..||...+.+||++. ++...+.
T Consensus       250 ~~~~~~~~li~~cl~~~p~~Rp~~~-~i~~~l~  281 (283)
T cd05090         250 DCPPRMYSLMTECWQEGPSRRPRFK-DIHTRLR  281 (283)
T ss_pred             CCCHHHHHHHHHHcccCcccCcCHH-HHHHHhh
Confidence            5678899999999999999999996 6766553

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=93.27  E-value=0.37  Score=30.26  Aligned_cols=31  Identities=32%  Similarity=0.802  Sum_probs=25.1

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHH
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESV   65 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l   65 (116)
                      ..+..+..+...||...|.+||++. +++..+
T Consensus       225 ~~~~~~~~li~~c~~~~p~~Rps~~-~l~~~l  255 (256)
T cd05114         225 LASMTVYEVMYSCWHEKPEGRPTFA-ELLRAI  255 (256)
T ss_pred             CCCHHHHHHHHHHccCCcccCcCHH-HHHHhh
Confidence            3456799999999999999999985 666543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=93.16  E-value=0.42  Score=30.66  Aligned_cols=33  Identities=36%  Similarity=0.971  Sum_probs=27.3

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ....++.+|...||...|.+||++. ++...+.+
T Consensus       253 ~~~~~~~~~i~~cl~~~P~~Rp~~~-~i~~~l~~  285 (290)
T cd05045         253 NCSEEMYNLMLTCWKQEPDKRPTFA-DISKELEK  285 (290)
T ss_pred             CCCHHHHHHHHHHccCCcccCCCHH-HHHHHHHH
Confidence            5667899999999999999999986 77766654

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG1094|consensus

Probab=93.04  E-value=0.25  Score=35.71  Aligned_cols=36  Identities=28%  Similarity=0.738  Sum_probs=29.9

Q ss_pred             CCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHH
Q psy12612         25 CLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESV   65 (116)
Q Consensus        25 ~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l   65 (116)
                      +.+|.    -|+..+|.++..||..++.+||+|. ++...+
T Consensus       766 l~~P~----~cp~~lyelml~Cw~~es~~RPsFe-~lh~~l  801 (807)
T KOG1094|consen  766 LSRPP----ACPQGLYELMLRCWRRESEQRPSFE-QLHLFL  801 (807)
T ss_pred             ccCCC----cCcHHHHHHHHHHhchhhhcCCCHH-HHHHHH
Confidence            45566    8999999999999999999999995 665444

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=92.97  E-value=0.57  Score=29.56  Aligned_cols=33  Identities=36%  Similarity=0.858  Sum_probs=27.3

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .....++.++..||...+..||++. ++...+.+
T Consensus       234 ~~~~~~~~li~~c~~~~p~~Rp~~~-~i~~~l~~  266 (268)
T cd05063         234 DCPSAVYQLMLQCWQQDRARRPRFV-DIVNLLDK  266 (268)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHh
Confidence            5678899999999999999999986 77766543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=92.88  E-value=0.45  Score=31.06  Aligned_cols=32  Identities=34%  Similarity=0.770  Sum_probs=26.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .+..++..+...||...+..||++. +++..+.
T Consensus       235 ~~~~~~~~li~~cl~~~p~~Rps~~-~l~~~l~  266 (316)
T cd05108         235 ICTIDVYMIMVKCWMIDADSRPKFR-ELIIEFS  266 (316)
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHH-HHHHHHH
Confidence            5678999999999999999999996 5555443

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=92.84  E-value=0.53  Score=29.84  Aligned_cols=32  Identities=38%  Similarity=0.952  Sum_probs=26.8

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++.++..++..||...+.+||++. ++...+.
T Consensus       245 ~~~~~~~~li~~~l~~~p~~Rpt~~-~l~~~l~  276 (277)
T cd05032         245 NCPDKLLELMRMCWQYNPKMRPTFL-EIVSSLK  276 (277)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHH-HHHHHhc
Confidence            5678899999999999999999986 7776553

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=92.82  E-value=0.56  Score=29.45  Aligned_cols=32  Identities=34%  Similarity=0.920  Sum_probs=26.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++..+..+...||...|.+||++. ++...+.
T Consensus       228 ~~~~~~~~~i~~~l~~~p~~Rpt~~-~l~~~L~  259 (261)
T cd05148         228 KCPQEIYKIMLECWAAEPEDRPSFK-ALREELD  259 (261)
T ss_pred             CCCHHHHHHHHHHcCCCchhCcCHH-HHHHHHh
Confidence            5667888999999999999999986 7776654

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=92.69  E-value=0.63  Score=29.38  Aligned_cols=32  Identities=38%  Similarity=0.910  Sum_probs=26.6

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+..++.+...||...|.+||++. ++...+.
T Consensus       229 ~~~~~~~~li~~cl~~~p~~Rp~~~-~l~~~l~  260 (263)
T cd05052         229 GCPPKVYELMRACWQWNPSDRPSFA-EIHQAFE  260 (263)
T ss_pred             CCCHHHHHHHHHHccCCcccCCCHH-HHHHHHH
Confidence            5678899999999999999999986 7766654

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=92.68  E-value=0.61  Score=29.49  Aligned_cols=33  Identities=27%  Similarity=0.749  Sum_probs=26.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ....++..+...||...|.+||++. ++...+.+
T Consensus       238 ~~~~~~~~li~~~l~~~p~~Rps~~-~l~~~l~~  270 (272)
T cd05075         238 DCLDGLYSLMSSCWLLNPKDRPSFE-TLRCELEK  270 (272)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHh
Confidence            4567788999999999999999885 77766543

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=92.64  E-value=0.5  Score=30.58  Aligned_cols=33  Identities=36%  Similarity=0.946  Sum_probs=26.8

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .+..+++.+...||...|.+||++. +++..+.+
T Consensus       263 ~~~~~~~~li~~cl~~~p~~Rps~~-e~l~~l~~  295 (304)
T cd05101         263 NCTNELYMMMRDCWHAIPSHRPTFK-QLVEDLDR  295 (304)
T ss_pred             CCCHHHHHHHHHHcccChhhCCCHH-HHHHHHHH
Confidence            5678899999999999999999885 66666543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=92.59  E-value=0.61  Score=29.43  Aligned_cols=32  Identities=34%  Similarity=0.881  Sum_probs=26.8

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||...+.+||++. ++...+.
T Consensus       232 ~~~~~l~~li~~cl~~~p~~Rp~~~-ei~~~l~  263 (266)
T cd05033         232 DCPSALYQLMLDCWQKDRNERPTFS-QIVSTLD  263 (266)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHH
Confidence            5677899999999999999999985 7776654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=92.56  E-value=0.56  Score=29.44  Aligned_cols=34  Identities=35%  Similarity=0.912  Sum_probs=28.1

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcC
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKG   68 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~   68 (116)
                      .++..++.++..||...|.+||++. ++...+...
T Consensus       222 ~~~~~l~~li~~cl~~~p~~Rp~~~-~l~~~l~~~  255 (257)
T cd05060         222 ECPQEIYSIMLSCWKYRPEDRPTFS-ELESTFRRD  255 (257)
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHH-HHHHHHHhc
Confidence            5667889999999999999999986 777776653

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=92.53  E-value=0.56  Score=29.51  Aligned_cols=32  Identities=38%  Similarity=0.905  Sum_probs=26.2

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+..+.++...||...|.+||++. ++...++
T Consensus       227 ~~~~~~~~li~~~l~~~p~~Rp~~~-~l~~~l~  258 (260)
T cd05067         227 NCPEELYELMRLCWKEKPEERPTFE-YLRSVLE  258 (260)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHH-HHHHHhh
Confidence            4567899999999999999999985 6666554

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=92.47  E-value=0.72  Score=28.99  Aligned_cols=32  Identities=38%  Similarity=0.854  Sum_probs=26.3

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||...+.+||++. ++...++
T Consensus       228 ~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~  259 (261)
T cd05072         228 NCPDELYDIMKTCWKEKAEERPTFD-YLQSVLD  259 (261)
T ss_pred             CCCHHHHHHHHHHccCCcccCcCHH-HHHHHHh
Confidence            4567899999999999999999996 7766654

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=92.30  E-value=0.61  Score=29.42  Aligned_cols=32  Identities=38%  Similarity=0.928  Sum_probs=26.6

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .+..+++.+...||..+|.+||++. ++...+.
T Consensus       239 ~~~~~~~~li~~~l~~~p~~Rp~~~-e~~~~l~  270 (273)
T cd05035         239 DCLDELYDLMYSCWRADPKDRPTFT-KLREVLE  270 (273)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHH
Confidence            5667899999999999999999986 7766654

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=92.29  E-value=0.78  Score=28.93  Aligned_cols=32  Identities=41%  Similarity=1.003  Sum_probs=26.8

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.+++.++..||...|.+||++. ++...+.
T Consensus       237 ~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~  268 (269)
T cd05044         237 NCPDKIYQLMTNCWAQDPSERPTFD-RIQEILQ  268 (269)
T ss_pred             cchHHHHHHHHHHcCCCcccCCCHH-HHHHHHh
Confidence            4567899999999999999999996 7776654

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=92.20  E-value=0.75  Score=29.21  Aligned_cols=32  Identities=41%  Similarity=0.850  Sum_probs=26.8

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+..+.++...||..+|.+||+.. +++..+.
T Consensus       248 ~~~~~~~~li~~~l~~~p~~Rp~~~-eil~~l~  279 (280)
T cd05049         248 TCPSEVYDIMLGCWKRDPQQRINIK-DIHERLQ  279 (280)
T ss_pred             CCCHHHHHHHHHHcCCCcccCCCHH-HHHHHhh
Confidence            5678899999999999999999985 7776653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=91.94  E-value=0.78  Score=29.30  Aligned_cols=32  Identities=38%  Similarity=0.800  Sum_probs=26.7

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++..++++...||..+|.+||+.. ++...+.
T Consensus       248 ~~~~~~~~li~~cl~~~P~~Rp~~~-~l~~~l~  279 (280)
T cd05092         248 TCPPEVYAIMQGCWQREPQQRMVIK-DIHSRLQ  279 (280)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHH-HHHHHHh
Confidence            5678899999999999999999985 7766553

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=91.88  E-value=0.75  Score=29.28  Aligned_cols=33  Identities=39%  Similarity=0.973  Sum_probs=27.0

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .++.++.++...||..++.+||++. ++...+..
T Consensus       243 ~~~~~~~~li~~~l~~~p~~Rps~~-~~~~~l~~  275 (280)
T cd05043         243 NCPDELFAVMACCWALDPEERPSFS-QLVQCLTD  275 (280)
T ss_pred             cCCHHHHHHHHHHcCCChhhCCCHH-HHHHHHHH
Confidence            4567899999999999999999986 77766654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=91.76  E-value=0.86  Score=28.81  Aligned_cols=32  Identities=34%  Similarity=0.850  Sum_probs=26.2

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||+..+.+||++. ++...+.
T Consensus       233 ~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~  264 (267)
T cd05066         233 DCPAALHQLMLDCWQKDRNERPKFE-QIVSILD  264 (267)
T ss_pred             CCCHHHHHHHHHHcccCchhCCCHH-HHHHHHH
Confidence            4567889999999999999999986 7766554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=91.58  E-value=0.77  Score=29.13  Aligned_cols=32  Identities=44%  Similarity=1.074  Sum_probs=26.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ....+++.+...||...|.+||++. +++..+.
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rps~~-~il~~l~  266 (270)
T cd05047         235 NCDDEVYDLMRQCWREKPYERPSFA-QILVSLN  266 (270)
T ss_pred             cCCHHHHHHHHHHcccChhhCCCHH-HHHHHHH
Confidence            4567899999999999999999996 6766554

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=91.52  E-value=0.93  Score=28.47  Aligned_cols=33  Identities=30%  Similarity=0.854  Sum_probs=26.9

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ..+..++++...||...|.+||+.. +++..+.+
T Consensus       226 ~~~~~~~~li~~cl~~~p~~Rp~~~-~il~~l~~  258 (262)
T cd05058         226 YCPDPLYEVMLSCWHPKPEMRPTFS-ELVSRIEQ  258 (262)
T ss_pred             cCCHHHHHHHHHHcCCChhhCCCHH-HHHHHHHH
Confidence            3457899999999999999999986 77766654

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=91.33  E-value=1  Score=28.73  Aligned_cols=33  Identities=30%  Similarity=0.786  Sum_probs=27.0

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .+..++..+...||...+..||++. ++...+..
T Consensus       235 ~~~~~~~~~~~~~l~~~p~~Rp~~~-~l~~~l~~  267 (279)
T cd05057         235 ICTIDVYMVLVKCWMIDAESRPTFK-ELINEFSK  267 (279)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHH-HHHHHHHH
Confidence            5668899999999999999999986 66665554

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG1164|consensus

Probab=91.27  E-value=1.8  Score=28.70  Aligned_cols=81  Identities=14%  Similarity=0.142  Sum_probs=47.8

Q ss_pred             ccCHHHHHHHHHHhcccCCCCCCCCh-H--HHHHHHhc-CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         33 LTCEEEVTAIMKRCWNEDPSERPDFT-T--EIVESVRK-GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        33 ~~~~~dv~s~g~~~we~~~~~~p~~~-~--~~~~~l~~-~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .+...|+||++-.+-++..+..|.-. +  .....+.. ......... ...++.++.+++..+=..+...+|....+..
T Consensus       214 ~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~  292 (322)
T KOG1164|consen  214 QGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRF-GDLKPEEFAKILEYIDSLDYEDKPDYEKLAE  292 (322)
T ss_pred             cCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccc-cCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence            35678999988887776666556321 0  01111111 111111100 0135677788888777789999999999988


Q ss_pred             HHHHhh
Q psy12612        109 AIRKLN  114 (116)
Q Consensus       109 ~l~~~~  114 (116)
                      .++...
T Consensus       293 ~l~~~~  298 (322)
T KOG1164|consen  293 LLKDVF  298 (322)
T ss_pred             HHHHHH
Confidence            776543

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=91.22  E-value=1  Score=28.35  Aligned_cols=32  Identities=38%  Similarity=0.877  Sum_probs=26.3

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ....++..+...||...|.+||++. ++...++
T Consensus       228 ~~~~~~~~li~~~l~~~P~~Rp~~~-~l~~~l~  259 (261)
T cd05068         228 GCPKELYDIMLDCWKEDPDDRPTFE-TLQWKLE  259 (261)
T ss_pred             cCCHHHHHHHHHHhhcCcccCCCHH-HHHHHHh
Confidence            5667889999999999999999986 7766554

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=91.19  E-value=1.2  Score=28.35  Aligned_cols=35  Identities=34%  Similarity=0.711  Sum_probs=28.0

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCC
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGE   69 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~   69 (116)
                      .+..++..+...||..++..||++. +++..+....
T Consensus       235 ~~~~~~~~li~~~l~~dp~~Rp~~~-~l~~~l~~~~  269 (279)
T cd05109         235 ICTIDVYMIMVKCWMIDSECRPRFR-ELVDEFSRMA  269 (279)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHHhh
Confidence            4567899999999999999999996 7776665443

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>PHA02988 hypothetical protein; Provisional

Probab=90.99  E-value=1.2  Score=28.69  Aligned_cols=33  Identities=27%  Similarity=0.588  Sum_probs=27.3

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .++..+..+...||+.+|..||++. +++..+..
T Consensus       246 ~~~~~l~~li~~cl~~dp~~Rps~~-ell~~l~~  278 (283)
T PHA02988        246 DCPLEIKCIVEACTSHDSIKRPNIK-EILYNLSL  278 (283)
T ss_pred             cCcHHHHHHHHHHhcCCcccCcCHH-HHHHHHHH
Confidence            5667888999999999999999996 77766653

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=90.86  E-value=1.2  Score=28.57  Aligned_cols=33  Identities=39%  Similarity=1.014  Sum_probs=27.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .+..++..+...||...|.+||+.. +++..+..
T Consensus       258 ~~~~~~~~li~~~l~~~p~~Rps~~-eil~~l~~  290 (293)
T cd05053         258 NCTQELYHLMRDCWHEVPSQRPTFK-QLVEDLDR  290 (293)
T ss_pred             CCCHHHHHHHHHHcccCcccCcCHH-HHHHHHHH
Confidence            5678999999999999999999885 77776654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=90.80  E-value=1.1  Score=28.29  Aligned_cols=31  Identities=42%  Similarity=0.863  Sum_probs=25.0

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHH
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESV   65 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l   65 (116)
                      .....+..+...||...+.+||+.. +++..+
T Consensus       225 ~~~~~~~~li~~cl~~~p~~Rp~~~-~ll~~~  255 (256)
T cd05113         225 LASEKVYAIMYSCWHEKAEERPTFQ-QLLSSI  255 (256)
T ss_pred             CCCHHHHHHHHHHcCCCcccCCCHH-HHHHhh
Confidence            4457889999999999999999985 666544

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=90.75  E-value=1  Score=29.00  Aligned_cols=34  Identities=32%  Similarity=0.690  Sum_probs=27.8

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcC
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKG   68 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~   68 (116)
                      ..+.++..+...||...|.+||+.. ++...+...
T Consensus       249 ~~~~~~~~li~~~l~~~P~~Rpt~~-~v~~~l~~~  282 (291)
T cd05094         249 VCPKEVYDIMLGCWQREPQQRLNIK-EIYKILHAL  282 (291)
T ss_pred             cCCHHHHHHHHHHcccChhhCcCHH-HHHHHHHHH
Confidence            4567899999999999999999985 777766554

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=90.68  E-value=1.1  Score=28.83  Aligned_cols=33  Identities=33%  Similarity=0.726  Sum_probs=26.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ..+.++.++...||...|.+||++. ++...+..
T Consensus       246 ~~~~~l~~li~~~l~~~p~~Rpt~~-~v~~~l~~  278 (288)
T cd05093         246 TCPKEVYDLMLGCWQREPHMRLNIK-EIHSLLQN  278 (288)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHH-HHHHHHHH
Confidence            4567899999999999999999985 66555543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=90.64  E-value=1.2  Score=29.01  Aligned_cols=33  Identities=36%  Similarity=0.977  Sum_probs=26.6

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .+..++..+...||...+.+||+.. +++..+..
T Consensus       260 ~~~~~l~~li~~cl~~~p~~Rps~~-~ll~~l~~  292 (314)
T cd05099         260 NCTHELYMLMRECWHAVPTQRPTFK-QLVEALDK  292 (314)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHH
Confidence            5677899999999999999999885 66655543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=90.53  E-value=1.4  Score=27.99  Aligned_cols=32  Identities=38%  Similarity=0.944  Sum_probs=26.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+..+..++..||...+.+||++. +++..+.
T Consensus       245 ~~~~~~~~~i~~cl~~~p~~Rps~~-~vl~~l~  276 (277)
T cd05036         245 GCPGPVYRIMTDCWQHTPEDRPNFA-TILERIQ  276 (277)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHH-HHHHHhh
Confidence            4567889999999999999999986 7776653

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=90.51  E-value=1.4  Score=27.62  Aligned_cols=32  Identities=38%  Similarity=0.910  Sum_probs=25.6

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||...+.+||++. ++...+.
T Consensus       228 ~~~~~~~~~i~~~l~~~p~~Rp~~~-~l~~~l~  259 (261)
T cd05034         228 NCPEELYDLMLQCWDKDPEERPTFE-YLQSFLE  259 (261)
T ss_pred             CCCHHHHHHHHHHcccCcccCCCHH-HHHHHHh
Confidence            4567899999999999999999885 6665543

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=90.26  E-value=1.4  Score=28.62  Aligned_cols=33  Identities=30%  Similarity=0.765  Sum_probs=26.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .+..++..+...||...+..||++. ++...+..
T Consensus       235 ~~~~~~~~li~~c~~~~p~~Rp~~~-~l~~~l~~  267 (303)
T cd05110         235 ICTIDVYMVMVKCWMIDADSRPKFK-ELAAEFSR  267 (303)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHH
Confidence            4567899999999999999999986 66555443

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=90.12  E-value=1.3  Score=27.96  Aligned_cols=32  Identities=31%  Similarity=0.835  Sum_probs=25.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++.++..+...||...+.+||++. ++...+.
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~  266 (269)
T cd05065         235 DCPTALHQLMLDCWQKDRNARPKFG-QIVSTLD  266 (269)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHH
Confidence            5667888899999999999999885 6666554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=89.97  E-value=1.5  Score=28.35  Aligned_cols=32  Identities=38%  Similarity=0.992  Sum_probs=25.9

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ....++..++..||...|.+||++. ++...+.
T Consensus       242 ~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~  273 (297)
T cd05089         242 NCDDEVYELMRQCWRDRPYERPPFA-QISVQLS  273 (297)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHH
Confidence            4667899999999999999999996 6655444

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=89.95  E-value=1.7  Score=27.11  Aligned_cols=31  Identities=35%  Similarity=1.021  Sum_probs=25.6

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHH
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESV   65 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l   65 (116)
                      ..+.++.++...||...|.+||++. ++...+
T Consensus       218 ~~~~~~~~li~~~l~~~p~~Rp~~~-~l~~~l  248 (250)
T cd05085         218 KCPDDVYKVMQRCWDYKPENRPKFS-ELQKEL  248 (250)
T ss_pred             CCCHHHHHHHHHHcccCcccCCCHH-HHHHHh
Confidence            5668999999999999999999986 666544

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=89.93  E-value=1.5  Score=27.85  Aligned_cols=32  Identities=34%  Similarity=0.925  Sum_probs=26.1

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++..+.++...||+..+.+||++. +++..+.
T Consensus       245 ~~~~~~~~li~~~l~~~p~~Rps~~-e~l~~l~  276 (277)
T cd05062         245 NCPDMLFELMRMCWQYNPKMRPSFL-EIISSIK  276 (277)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHH-HHHHHhh
Confidence            4567789999999999999999986 7766653

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=89.89  E-value=1.3  Score=27.51  Aligned_cols=31  Identities=42%  Similarity=1.017  Sum_probs=25.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHH
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESV   65 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l   65 (116)
                      ..+.++..+...||...+.+||+.. +++..+
T Consensus       231 ~~~~~~~~li~~~l~~~p~~Rps~~-~l~~~l  261 (262)
T cd00192         231 YCPDELYELMLSCWQLDPEDRPTFS-ELVERL  261 (262)
T ss_pred             cCChHHHHHHHHHccCCcccCcCHH-HHHHhh
Confidence            5678899999999999999999885 666554

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=89.89  E-value=1.5  Score=27.76  Aligned_cols=33  Identities=36%  Similarity=0.895  Sum_probs=26.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .++..+..+...||...|.+||+.. ++...+..
T Consensus       232 ~~~~~~~~li~~~l~~~P~~Rpt~~-~~~~~l~~  264 (270)
T cd05056         232 NCPPTLYSLMTKCWAYDPSKRPRFT-ELKAQLSD  264 (270)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHH
Confidence            5677899999999999999999885 66665543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=89.64  E-value=1.6  Score=28.31  Aligned_cols=33  Identities=36%  Similarity=0.968  Sum_probs=26.2

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ....++..++..||...+.+||++. +++..+..
T Consensus       266 ~~~~~~~~li~~~l~~~p~~Rps~~-evl~~l~~  298 (307)
T cd05098         266 NCTNELYMMMRDCWHAVPSQRPTFK-QLVEDLDR  298 (307)
T ss_pred             cCCHHHHHHHHHHcccChhhCcCHH-HHHHHHHH
Confidence            5677889999999999999999885 66655543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=89.60  E-value=0.019  Score=36.36  Aligned_cols=40  Identities=13%  Similarity=0.039  Sum_probs=21.6

Q ss_pred             eecCCCCCCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHh
Q psy12612          3 VELSDLRILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRC   46 (116)
Q Consensus         3 vKi~Dfgls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~   46 (116)
                      ++|.|||.+..-.......-+.+.+.    |..++|+|+||+++
T Consensus       173 i~liDfg~~~~~~e~~a~d~~vler~----y~~~~di~~lg~~~  212 (232)
T PRK10359        173 LRIIDLSGKRCTAQRKAKDRIDLERH----YGIKNEIKDLGYYL  212 (232)
T ss_pred             EEEEECCCcccccchhhHHHHHHHhH----hcccccccceeEee
Confidence            68999997753211110000111122    25679999999864

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=89.55  E-value=1  Score=30.85  Aligned_cols=33  Identities=36%  Similarity=0.802  Sum_probs=27.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ....++..+...||+..+..||++. +++..++.
T Consensus       366 ~~~~~l~~li~~cl~~~P~~RPs~~-ell~~L~~  398 (401)
T cd05107         366 HASDEIYEIMQKCWEEKFEIRPDFS-QLVHLVGD  398 (401)
T ss_pred             CCCHHHHHHHHHHcCCChhHCcCHH-HHHHHHHH
Confidence            4567899999999999999999996 77776653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=89.52  E-value=0.99  Score=30.45  Aligned_cols=33  Identities=39%  Similarity=0.872  Sum_probs=27.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ..+.++..+...||..+|.+||++. +++..+++
T Consensus       341 ~~~~~l~~li~~cl~~dP~~RPs~~-eil~~l~~  373 (375)
T cd05104         341 CAPSEMYDIMKSCWDADPLKRPTFK-QIVQLIEQ  373 (375)
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHH-HHHHHHHh
Confidence            4567899999999999999999996 77777653

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=89.51  E-value=1.6  Score=28.78  Aligned_cols=33  Identities=39%  Similarity=0.985  Sum_probs=27.0

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .+...++.+...||...+.+||++. +++..+..
T Consensus       260 ~~~~~l~~li~~cl~~~p~~Rps~~-ell~~l~~  292 (334)
T cd05100         260 NCTHELYMIMRECWHAVPSQRPTFK-QLVEDLDR  292 (334)
T ss_pred             CCCHHHHHHHHHHcccChhhCcCHH-HHHHHHHH
Confidence            5567899999999999999999986 66666554

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=89.13  E-value=2  Score=27.02  Aligned_cols=32  Identities=44%  Similarity=0.917  Sum_probs=24.9

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||...|.+||++. ++...+.
T Consensus       227 ~~~~~~~~~i~~~l~~~p~~Rp~~~-~l~~~L~  258 (260)
T cd05073         227 NCPEELYNIMMRCWKNRPEERPTFE-YIQSVLD  258 (260)
T ss_pred             cCCHHHHHHHHHHcccCcccCcCHH-HHHHHHh
Confidence            4556788999999999999999885 6665553

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=89.07  E-value=1.9  Score=26.97  Aligned_cols=32  Identities=41%  Similarity=0.934  Sum_probs=26.2

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.+++.+...||...|.+||++. ++...+.
T Consensus       223 ~~~~~~~~li~~~l~~~p~~Rp~~~-~l~~~l~  254 (256)
T cd05039         223 GCPPEVYKVMKDCWELDPAKRPTFK-QLREQLA  254 (256)
T ss_pred             CCCHHHHHHHHHHhccChhhCcCHH-HHHHHHh
Confidence            4567899999999999999999985 7776654

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=89.05  E-value=1.7  Score=27.32  Aligned_cols=31  Identities=35%  Similarity=0.848  Sum_probs=25.1

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHH
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESV   65 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l   65 (116)
                      .++..+..++..||...+.+||++. +++..+
T Consensus       225 ~~~~~~~~li~~cl~~~p~~Rpt~~-~~l~~l  255 (256)
T cd05059         225 LAPTEVYTIMYSCWHEKPEDRPAFK-KLLSQL  255 (256)
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHH-HHHHHh
Confidence            4567899999999999999999985 666543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=88.54  E-value=1.4  Score=29.09  Aligned_cols=33  Identities=39%  Similarity=0.827  Sum_probs=26.9

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ....++..+...||..+|.+||++. +++..+..
T Consensus       301 ~~~~~l~~li~~cl~~dp~~RPs~~-el~~~l~~  333 (338)
T cd05102         301 NATPEIYRIMLACWQGDPKERPTFS-ALVEILGD  333 (338)
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHH-HHHHHHHH
Confidence            4567899999999999999999986 77766553

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=88.42  E-value=2.1  Score=26.80  Aligned_cols=32  Identities=34%  Similarity=0.811  Sum_probs=26.6

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++..+..+...||...|.+||++. ++...+.
T Consensus       223 ~~~~~~~~li~~~l~~~p~~Rpt~~-~l~~~l~  254 (256)
T cd05082         223 GCPPVVYDVMKQCWHLDAATRPSFL-QLREQLE  254 (256)
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHH-HHHHHHh
Confidence            4567899999999999999999986 7776654

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=88.40  E-value=2.2  Score=26.72  Aligned_cols=32  Identities=31%  Similarity=0.903  Sum_probs=25.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+..+..+...||...+..||++. ++...+.
T Consensus       221 ~~~~~~~~li~~~l~~~p~~Rp~~~-~l~~~l~  252 (254)
T cd05083         221 GCPADVYVLMTSCWETEPKKRPSFH-KLREKLE  252 (254)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHc
Confidence            4556788899999999999999885 7766554

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=88.25  E-value=2.8  Score=26.37  Aligned_cols=32  Identities=41%  Similarity=0.895  Sum_probs=24.7

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+..+..+...||...|.+||+.. ++...++
T Consensus       227 ~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~  258 (260)
T cd05069         227 GCPESLHELMKLCWKKDPDERPTFE-YIQSFLE  258 (260)
T ss_pred             ccCHHHHHHHHHHccCCcccCcCHH-HHHHHHh
Confidence            4456788888899999999999885 6666554

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=87.95  E-value=2.8  Score=26.36  Aligned_cols=32  Identities=31%  Similarity=0.809  Sum_probs=24.9

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+..+.++...||...|.+||++. ++...+.
T Consensus       227 ~~~~~~~~li~~~l~~~p~~Rpt~~-~l~~~l~  258 (260)
T cd05070         227 DCPISLHELMLQCWKKDPEERPTFE-YLQSFLE  258 (260)
T ss_pred             cCCHHHHHHHHHHcccCcccCcCHH-HHHHHHh
Confidence            4567788899999999999999885 6655543

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=87.67  E-value=1.4  Score=30.18  Aligned_cols=33  Identities=36%  Similarity=0.836  Sum_probs=27.2

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ..+.++..++..||..+|.+||++. ++...+..
T Consensus       364 ~~~~~l~~li~~cl~~dP~~RPt~~-~l~~~l~~  396 (400)
T cd05105         364 HATQEVYDIMVKCWNSEPEKRPSFL-HLSDIVES  396 (400)
T ss_pred             cCCHHHHHHHHHHCccCHhHCcCHH-HHHHHHHH
Confidence            5667899999999999999999986 67666654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=87.54  E-value=2.5  Score=26.38  Aligned_cols=31  Identities=35%  Similarity=0.973  Sum_probs=25.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHH
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESV   65 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l   65 (116)
                      ..+..+..+...||...+.+||++. ++...+
T Consensus       220 ~~~~~~~~li~~~l~~~p~~Rps~~-~~~~~l  250 (252)
T cd05084         220 LCPDAVYRLMERCWEYDPGQRPSFS-TVHQEL  250 (252)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHH-HHHHHH
Confidence            4567889999999999999999986 666654

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=87.34  E-value=3.7  Score=26.32  Aligned_cols=35  Identities=40%  Similarity=0.854  Sum_probs=28.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCC
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGE   69 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~   69 (116)
                      ..+..+..++..||...+.+||++. ++++.+.+..
T Consensus       245 ~~~~~~~~li~~~l~~~p~~Rps~~-~ll~~l~~~~  279 (288)
T cd05061         245 NCPERVTDLMRMCWQFNPKMRPTFL-EIVNLLKDDL  279 (288)
T ss_pred             CCCHHHHHHHHHHcCCChhHCcCHH-HHHHHHHhhc
Confidence            4567899999999999999999985 7877776644

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=87.06  E-value=2.6  Score=26.88  Aligned_cols=33  Identities=52%  Similarity=1.051  Sum_probs=27.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ..+.++.++...||...+.+||++. ++...+..
T Consensus       250 ~~~~~~~~li~~cl~~~p~~Rpt~~-ei~~~l~~  282 (284)
T cd05081         250 GCPAEIYAIMKECWNNDPSQRPSFS-ELALQVEA  282 (284)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHH-HHHHHHHh
Confidence            5667899999999999999999985 77766643

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=86.97  E-value=1.8  Score=28.73  Aligned_cols=32  Identities=38%  Similarity=0.825  Sum_probs=26.2

Q ss_pred             CHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         35 CEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        35 ~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ...++..++..||...|.+||++. +++..+..
T Consensus       307 ~~~~~~~~~~~cl~~~p~~Rps~~-eil~~l~~  338 (343)
T cd05103         307 TTPEMYQTMLDCWHGEPSQRPTFS-ELVEHLGN  338 (343)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHH-HHHHHHHH
Confidence            456899999999999999999986 77766643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=86.63  E-value=2.8  Score=27.19  Aligned_cols=32  Identities=44%  Similarity=1.074  Sum_probs=25.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ....++..+...||...|.+||+.. +++..+.
T Consensus       247 ~~~~~~~~li~~~l~~~p~~Rp~~~-~il~~l~  278 (303)
T cd05088         247 NCDDEVYDLMRQCWREKPYERPSFA-QILVSLN  278 (303)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHH
Confidence            4567889999999999999999986 6655443

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=86.61  E-value=3  Score=26.03  Aligned_cols=30  Identities=30%  Similarity=0.878  Sum_probs=24.4

Q ss_pred             CHHHHHHHHHHhcccCCCCCCCChHHHHHHH
Q psy12612         35 CEEEVTAIMKRCWNEDPSERPDFTTEIVESV   65 (116)
Q Consensus        35 ~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l   65 (116)
                      .+..++.+...||...|.+||++. +++..+
T Consensus       226 ~~~~~~~l~~~~l~~~p~~Rp~~~-~~l~~l  255 (256)
T cd05112         226 ASQSVYELMQHCWKERPEDRPSFS-LLLHQL  255 (256)
T ss_pred             CCHHHHHHHHHHcccChhhCCCHH-HHHHhh
Confidence            457799999999999999999985 666543

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=86.37  E-value=3.4  Score=26.10  Aligned_cols=32  Identities=31%  Similarity=0.853  Sum_probs=25.3

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ....++..++..||...|..||++. ++...+.
T Consensus       239 ~~~~~~~~l~~~~l~~~p~~Rps~~-~~~~~l~  270 (273)
T cd05074         239 DCLEDVYELMCQCWSPEPKCRPSFQ-HLRDQLE  270 (273)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHH
Confidence            4457888999999999999999885 6766654

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=85.84  E-value=2.9  Score=26.03  Aligned_cols=29  Identities=48%  Similarity=1.151  Sum_probs=23.7

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHH
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVE   63 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~   63 (116)
                      ..+.+++.+...||...+.+||+.. +++.
T Consensus       228 ~~~~~~~~~i~~~l~~~p~~Rpt~~-~ll~  256 (258)
T smart00219      228 NCPPEIYKLMLQCWAEDPEDRPTFS-ELVE  256 (258)
T ss_pred             cCCHHHHHHHHHHCcCChhhCcCHH-HHHh
Confidence            4677889999999999999999875 6554

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=85.30  E-value=3.1  Score=26.39  Aligned_cols=33  Identities=36%  Similarity=0.990  Sum_probs=27.2

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .++..+..++..||...|..||++. ++...+..
T Consensus       250 ~~~~~~~~li~~cl~~~p~~Rpt~~-ei~~~l~~  282 (284)
T cd05038         250 SCPDEVYDLMKLCWEAEPQDRPSFA-DLILIVDR  282 (284)
T ss_pred             cCCHHHHHHHHHHhccChhhCCCHH-HHHHHHhh
Confidence            5667899999999999999999986 77766643

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=85.24  E-value=2.5  Score=26.97  Aligned_cols=33  Identities=30%  Similarity=0.832  Sum_probs=27.1

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .++..+..+...||+..|..||++. +++..+..
T Consensus       248 ~~~~~~~~li~~cl~~~p~~Rps~~-~i~~~l~~  280 (283)
T cd05080         248 NCPQEVYILMKNCWETEAKFRPTFR-SLIPILKE  280 (283)
T ss_pred             CCCHHHHHHHHHHhccChhhCCCHH-HHHHHHHH
Confidence            4567899999999999999999996 77766654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	116
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		9e-05
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		1e-04
1fvr_A	327	Tie2 Kinase Domain Length = 327		1e-04
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		1e-04
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		1e-04
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-04
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		1e-04
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-04
2pl0_A	289	Lck Bound To Imatinib Length = 289		1e-04
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		1e-04
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		1e-04
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		1e-04
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		1e-04
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		1e-04
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-04
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		1e-04
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		2e-04
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		2e-04
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		2e-04
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-04
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		2e-04
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		2e-04
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		2e-04
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-04
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		2e-04
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		2e-04
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		3e-04
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		3e-04
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		3e-04
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		6e-04
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		7e-04
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		6e-04
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		8e-04
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		6e-04

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
            E+ E + +G +  +P    L C++EV  +M++CW E P ERP F  +  ++ ++
Sbjct: 238 AELYEKLPQGYRLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 288

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
            E+ E + +G +  +P    L C++EV  +M++CW E P ERP F  +  ++ ++
Sbjct: 245 AELYEKLPQGYRLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 295

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
            E+ E + +G +  +P    L C++EV  +M++CW E P ERP F  +  ++ ++
Sbjct: 248 AELYEKLPQGYRLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +
Sbjct: 213 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 259

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +
Sbjct: 214 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 260

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +
Sbjct: 219 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 265

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +
Sbjct: 227 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 273

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +
Sbjct: 224 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 270

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +
Sbjct: 228 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 274

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +
Sbjct: 218 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +
Sbjct: 218 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +
Sbjct: 220 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 266

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +
Sbjct: 218 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +
Sbjct: 224 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 270

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +
Sbjct: 223 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 269

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +
Sbjct: 226 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 272

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +
Sbjct: 218 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 58  TTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
            +E+V  V +G +  RP L+  T    +  IM  CW+E P +RP F  L ++I  L
Sbjct: 211 NSEVVLKVSQGHRLYRPHLASDT----IYQIMYSCWHELPEKRPTFQQLLSSIEPL 262

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESV 65
           E++ ++ +G +  RP      C EE+  IM RCW   P ERP F  E ++SV
Sbjct: 377 EVIRALERGYRMPRPE----NCPEELYNIMMRCWKNRPEERPTF--EYIQSV 422

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E++ ++ +G +  RP      C EE+  IM RCW   P ERP F  +++ +
Sbjct: 377 EVIRALERGYRMPRPE----NCPEELYNIMMRCWKNRPEERPTFEYIQSVL 423

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 30  LSELTCEEEVTAIMKRCW-----NEDPSERPDFT-TEIVESVRKGEKCLRPSLSELTCEE 83
            S+ + + ++ A     W      + P ER  FT +E  E + +G +  RP L+     E
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMPYER--FTNSETAEHIAQGLRLYRPHLAS----E 233
Query: 84  EVTAIMKRCWNEDPSERPDFTTLKAAI 110
           +V  IM  CW+E   ERP F  L + I
Sbjct: 234 KVYTIMYSCWHEKADERPTFKILLSNI 260

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 30  LSELTCEEEVTAIMKRCW-----NEDPSERPDFT-TEIVESVRKGEKCLRPSLSELTCEE 83
            S+ + + ++ A     W      + P ER  FT +E  E + +G +  RP L+     E
Sbjct: 186 YSKFSSKSDIWAFGVLMWEIYSLGKMPYER--FTNSETAEHIAQGLRLYRPHLAS----E 239
Query: 84  EVTAIMKRCWNEDPSERPDFTTLKAAI 110
           +V  IM  CW+E   ERP F  L + I
Sbjct: 240 KVYTIMYSCWHEKADERPTFKILLSNI 266

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 30  LSELTCEEEVTAIMKRCW-----NEDPSERPDFT-TEIVESVRKGEKCLRPSLSELTCEE 83
            S+ + + ++ A     W      + P ER  FT +E  E + +G +  RP L+     E
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMPYER--FTNSETAEHIAQGLRLYRPHLAS----E 233
Query: 84  EVTAIMKRCWNEDPSERPDFTTLKAAI 110
           +V  IM  CW+E   ERP F  L + I
Sbjct: 234 KVYTIMYSCWHEKADERPTFKILLSNI 260

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 30  LSELTCEEEVTAIMKRCW-----NEDPSERPDFT-TEIVESVRKGEKCLRPSLSELTCEE 83
            S+ + + ++ A     W      + P ER  FT +E  E + +G +  RP L+     E
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYSLGKMPYER--FTNSETAEHIAQGLRLYRPHLAS----E 248
Query: 84  EVTAIMKRCWNEDPSERPDFTTLKAAI 110
           +V  IM  CW+E   ERP F  L + I
Sbjct: 249 KVYTIMYSCWHEKADERPTFKILLSNI 275

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 30  LSELTCEEEVTAIMKRCW-----NEDPSERPDFT-TEIVESVRKGEKCLRPSLSELTCEE 83
            S+ + + ++ A     W      + P ER  FT +E  E + +G +  RP L+     E
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIYSLGKMPYER--FTNSETAEHIAQGLRLYRPHLAS----E 228
Query: 84  EVTAIMKRCWNEDPSERPDFTTLKAAI 110
           +V  IM  CW+E   ERP F  L + I
Sbjct: 229 KVYTIMYSCWHEKADERPTFKILLSNI 255

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 30  LSELTCEEEVTAIMKRCW-----NEDPSERPDFT-TEIVESVRKGEKCLRPSLSELTCEE 83
            S+ + + ++ A     W      + P ER  FT +E  E + +G +  RP L+     E
Sbjct: 179 YSKFSSKSDIWAFGVLMWEIYSLGKMPYER--FTNSETAEHIAQGLRLYRPHLAS----E 232
Query: 84  EVTAIMKRCWNEDPSERPDFTTLKAAI 110
           +V  IM  CW+E   ERP F  L + I
Sbjct: 233 KVYTIMYSCWHEKADERPTFKILLSNI 259

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 30  LSELTCEEEVTAIMKRCW-----NEDPSERPDFT-TEIVESVRKGEKCLRPSLSELTCEE 83
            S+ + + ++ A     W      + P ER  FT +E  E + +G +  RP L+     E
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYSLGKMPYER--FTNSETAEHIAQGLRLYRPHLAS----E 248
Query: 84  EVTAIMKRCWNEDPSERPDFTTLKAAI 110
           +V  IM  CW+E   ERP F  L + I
Sbjct: 249 KVYTIMYSCWHEKADERPTFKILLSNI 275

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 52  SERPDFTTE---IVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA 108
            ++P F  E   ++  + KG++  +P L    C   +  +M RCW+ DPS+RP FT L  
Sbjct: 223 GKQPFFWLENKDVIGVLEKGDRLPKPDL----CPPVLYTLMTRCWDYDPSDRPRFTELVC 278
Query: 109 AIRKLNKI 116
           ++  + ++
Sbjct: 279 SLSDVYQM 286

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 52  SERPDFTTE---IVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA 108
            ++P F  E   ++  + KG++  +P L    C   +  +M RCW+ DPS+RP FT L  
Sbjct: 207 GKQPFFWLENKDVIGVLEKGDRLPKPDL----CPPVLYTLMTRCWDYDPSDRPRFTELVC 262
Query: 109 AIRKLNKI 116
           ++  + ++
Sbjct: 263 SLSDVYQM 270

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 52  SERPDFTTE---IVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA 108
            ++P F  E   ++  + KG++  +P L    C   +  +M RCW+ DPS+RP FT L  
Sbjct: 211 GKQPFFWLENKDVIGVLEKGDRLPKPDL----CPPVLYTLMTRCWDYDPSDRPRFTELVC 266
Query: 109 AIRKLNKI 116
           ++  + ++
Sbjct: 267 SLSDVYQM 274

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESV 65
           E++ ++ +G +  RP      C EE+  IM RCW   P ERP F  E ++SV
Sbjct: 220 EVIRALERGYRMPRPE----NCPEELYNIMMRCWKNRPEERPTF--EYIQSV 265

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E++ ++ +G +  RP      C EE+  IM RCW   P ERP F  +++ +
Sbjct: 220 EVIRALERGYRMPRPE----NCPEELYNIMMRCWKNRPEERPTFEYIQSVL 266

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESV 65
           E++ ++ +G +  RP      C EE+  IM RCW   P ERP F  E ++SV
Sbjct: 393 EVIRALERGYRMPRPE----NCPEELYNIMMRCWKNRPEERPTF--EYIQSV 438

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           E++ ++ +G +  RP      C EE+  IM RCW   P ERP F  +++ +
Sbjct: 393 EVIRALERGYRMPRPE----NCPEELYNIMMRCWKNRPEERPTFEYIQSVL 439

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 58  TTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK 107
             EI   +  G +  +P      C EEV  +M +CW+ DP +RP FT L+
Sbjct: 245 NAEIYNYLIGGNRLKQPP----ECMEEVYDLMYQCWSADPKQRPSFTCLR 290

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	116
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	8e-12
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-11
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-10
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-08
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-09
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-08
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-09
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-09
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	4e-09
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-08
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	6e-09
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-09
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-07
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	8e-09
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-07
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	8e-09
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-07
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-08
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-08
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	4e-07
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-08
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-08
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-07
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-08
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-07
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-08
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-07
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-08
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-07
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-08
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-08
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-08
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-07
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-08
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-07
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-08
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-07
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-08
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-07
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-08
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-08
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-08
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	7e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-08
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-08
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	6e-07
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-08
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-07
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-08
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	8e-08
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-08
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	7e-07
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-08
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-07
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-07
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-08
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-07
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-08
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-07
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-08
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-07
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-08
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	7e-08
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-08
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-07
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-08
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-07
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-07
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-08
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	5e-08
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-08
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	8e-07
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-08
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-07
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	4e-08
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	6e-08
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-08
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	8e-07
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-08
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-07
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	5e-08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	8e-07
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	5e-08
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	5e-07
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	6e-08
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	9e-07
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-08
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-06
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	6e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	5e-07
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	6e-08
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-07
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	7e-08
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-06
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	7e-08
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-06
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	7e-08
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	9e-07
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	7e-08
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-07
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	7e-08
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-06
4aoj_A	329	High affinity nerve growth factor receptor; transf	8e-08
4aoj_A	329	High affinity nerve growth factor receptor; transf	8e-07
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-08
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-07
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-07
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-07
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-06
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-07
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	7e-06
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-07
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-06
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-07
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-06
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	8e-07
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	5e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-05
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-06
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-06
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-06
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-05
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-05
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	5e-04
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-05
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-04

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 59.3 bits (144), Expect = 8e-12
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNKI 116
            I+  +  G   ++P+LS++   +E++ I+  CW  +  ERP FT L   + KL K 
Sbjct: 250 AIIWQMGTG---MKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 57.4 bits (139), Expect = 3e-11
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 5/66 (7%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCL 72
           + I+  +  G   ++PNLS++   +E++ I+  CW  +  ERP F T++++ + K  K  
Sbjct: 249 EAIIWQMGTG---MKPNLSQIGMGKEISDILLFCWAFEQEERPTF-TKLMDMLEKLPKRN 304

Query: 73  RPSLSE 78
           R  LS 
Sbjct: 305 R-RLSH 309

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 54.6 bits (132), Expect = 3e-10
 Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 5/97 (5%)

Query: 6   SDLRILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESV 65
            ++      I+ +V  G    RP L +    + + ++M RCW++DPS+RP    EIV+ +
Sbjct: 204 DEIGGPAFRIMWAVHNG---TRPPLIK-NLPKPIESLMTRCWSKDPSQRPSM-EEIVKIM 258

Query: 66  RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPD 102
               +    +   L    + +         +P     
Sbjct: 259 THLMRYFPGADEPLQYPCQHSLPPGEDGRVEPYVDFA 295

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 61  IVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNKI 116
           I+ +V  G    RP L +    + + ++M RCW++DPS+RP    +   ++ +  +
Sbjct: 213 IMWAVHNG---TRPPLIK-NLPKPIESLMTRCWSKDPSQRPSMEEI---VKIMTHL 261

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 51.9 bits (125), Expect = 3e-09
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)

Query: 60  EIVESVRKGEKCLRPSLSEL--TCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           +I+E V +G   L P LS++   C + +  +M  C  +   ERP F  + A I +L +
Sbjct: 233 QIIEMVGRGS--LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 50.0 bits (120), Expect = 1e-08
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 5/55 (9%)

Query: 12  RDEIVESVRKGEKCLRPNLSEL--TCEEEVTAIMKRCWNEDPSERPDFTTEIVES 64
           RD+I+E V +G   L P+LS++   C + +  +M  C  +   ERP F   I+  
Sbjct: 231 RDQIIEMVGRGS--LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSF-PRILAE 282

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 51.5 bits (124), Expect = 4e-09
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           EI   + KGE+  +P +    C  +V  IM++CW  D   RP F  L     K+
Sbjct: 227 EISSILEKGERLPQPPI----CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 48.4 bits (116), Expect = 6e-08
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           EI   + KGE+  +P +    C  +V  IM++CW  D   RP F  E++    K
Sbjct: 227 EISSILEKGERLPQPPI----CTIDVYMIMRKCWMIDADSRPKF-RELIIEFSK 275

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 50.7 bits (122), Expect = 6e-09
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 6/57 (10%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNKI 116
            +   V      L   +   TC E    +M+ CWN DP  RP FT +   + +L  I
Sbjct: 221 AVAYGV--AMNKLALPIPS-TCPEPFAKLMEDCWNPDPHSRPSFTNI---LDQLTTI 271

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
            +   V      L   +   TC E    +M+ CWN DP  RP F T I++
Sbjct: 221 AVAYGV--AMNKLALPIPS-TCPEPFAKLMEDCWNPDPHSRPSF-TNILD 266

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 50.8 bits (122), Expect = 8e-09
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
             ++E ++   +  RP      C +E+  IM  CWN + ++RP F  L   + ++
Sbjct: 239 FHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 45.7 bits (109), Expect = 4e-07
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
            ++E ++   +  RP+     C +E+  IM  CWN + ++RP F  
Sbjct: 240 HLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRD 281

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 50.8 bits (122), Expect = 8e-09
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
             ++E ++   +  RP      C +E+  IM  CWN + ++RP F  L   + ++
Sbjct: 270 FHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 46.2 bits (110), Expect = 3e-07
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
            ++E ++   +  RP+     C +E+  IM  CWN + ++RP F  
Sbjct: 271 HLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRD 312

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 50.8 bits (122), Expect = 8e-09
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
             + E + +GE+  RP      C  EV  +MK CW  + S RP F  L   ++ +
Sbjct: 258 LRLTELLERGERLPRPD----KCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 6/64 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT--EIVESVRKGEKC 71
            + E + +GE+  RP+     C  EV  +MK CW  + S RP F     I+++V +  + 
Sbjct: 259 RLTELLERGERLPRPD----KCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314

Query: 72  LRPS 75
             PS
Sbjct: 315 QAPS 318

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 50.4 bits (121), Expect = 1e-08
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           + ++E + +G++   P      C  EV  +MK CW   P +RP F+ L   +  L
Sbjct: 251 SRLLELLEEGQRLPAPP----ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 45.8 bits (109), Expect = 4e-07
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
            ++E + +G++   P      C  EV  +MK CW   P +RP F+ 
Sbjct: 252 RLLELLEEGQRLPAPP----ACPAEVHELMKLCWAPSPQDRPSFSA 293

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 50.4 bits (121), Expect = 1e-08
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           T +V ++++G++   P      C +EV  +M++CW   PS R  F  L      L
Sbjct: 250 TRLVNTLKEGKRLPCPP----NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 45.8 bits (109), Expect = 4e-07
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
            +V ++++G++   P      C +EV  +M++CW   PS R  F   ++E    
Sbjct: 251 RLVNTLKEGKRLPCPP----NCPDEVYQLMRKCWEFQPSNRTSF-QNLIEGFEA 299

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 50.0 bits (120), Expect = 1e-08
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)

Query: 22  GEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
            E+ LRP + E  C   +  +++ CW+ DP +RP F + IV+
Sbjct: 243 REEGLRPTIPE-DCPPRLRNVIELCWSGDPKKRPHF-SYIVK 282

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 50.0 bits (120), Expect = 1e-08
 Identities = 14/49 (28%), Positives = 31/49 (63%), Gaps = 4/49 (8%)

Query: 68  GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNKI 116
            E+ LRP++ E  C   +  +++ CW+ DP +RP F+ +   +++L+++
Sbjct: 243 REEGLRPTIPE-DCPPRLRNVIELCWSGDPKKRPHFSYI---VKELSEL 287

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 50.0 bits (120), Expect = 1e-08
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           EI   +  G +  +P      C EEV  +M +CW+ DP +RP FT L+  +  +
Sbjct: 247 EIYNYLIGGNRLKQPP----ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 9/73 (12%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           EI   +  G +  +P      C EEV  +M +CW+ DP +RP F T +   +      + 
Sbjct: 247 EIYNYLIGGNRLKQPP----ECMEEVYDLMYQCWSADPKQRPSF-TCLRMELEN----IL 297

Query: 74  PSLSELTCEEEVT 86
             LS L+  ++  
Sbjct: 298 GHLSVLSTSQDPL 310

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 50.3 bits (120), Expect = 1e-08
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E++  + +G++   P      C  E+ A+M  CW     +RPDF T++  +R  
Sbjct: 547 EVMAFIEQGKRMECPP----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 46.5 bits (110), Expect = 3e-07
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
           E++  + +G++   P      C  E+ A+M  CW     +RPDF T
Sbjct: 547 EVMAFIEQGKRMECPP----ECPPELYALMSDCWIYKWEDRPDFLT 588

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+   + KGE+   P+     C  E+  +M  CW  D   RP F  ++  +R  
Sbjct: 228 EVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 4/46 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
           E+   + KGE+   P      C  E+  +M  CW  D   RP F  
Sbjct: 228 EVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVENRPGFAA 269

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 50.3 bits (120), Expect = 1e-08
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+++ V +G +   P      C E +  +M +CW ++P ERP F  L+A +   
Sbjct: 472 EVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 47.2 bits (112), Expect = 1e-07
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           E+++ V +G +   P      C E +  +M +CW ++P ERP F   +  
Sbjct: 472 EVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTF-EYLQA 516

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           EI   V    + LRP +        V+ +MK C NEDP++RP F   IV  + K
Sbjct: 218 EIGMKV--ALEGLRPTIPP-GISPHVSKLMKICMNEDPAKRPKF-DMIVPILEK 267

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 49.9 bits (120), Expect = 2e-08
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNKI 116
           EI   V    + LRP++        V+ +MK C NEDP++RP F  +   +  L K+
Sbjct: 218 EIGMKV--ALEGLRPTIPP-GISPHVSKLMKICMNEDPAKRPKFDMI---VPILEKM 268

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 49.8 bits (119), Expect = 2e-08
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+++ V +G +   P      C E +  +M +CW ++P ERP F  L+A +   
Sbjct: 389 EVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 47.1 bits (112), Expect = 2e-07
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           E+++ V +G +   P      C E +  +M +CW ++P ERP F   +  
Sbjct: 389 EVLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTF-EYLQA 433

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 49.7 bits (119), Expect = 2e-08
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E++ ++ +G +  RP      C EE+  IM RCW   P ERP F  +++ +   
Sbjct: 393 EVIRALERGYRMPRPE----NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 46.6 bits (111), Expect = 2e-07
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           E++ ++ +G +  RP      C EE+  IM RCW   P ERP F   I  
Sbjct: 393 EVIRALERGYRMPRPE----NCPEELYNIMMRCWKNRPEERPTF-EYIQS 437

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 49.7 bits (119), Expect = 2e-08
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           ++V  V KG K   P      C   V  +MK CW+ D + RP F  L+  +  +
Sbjct: 394 DVVPRVEKGYKMDAPD----GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 46.2 bits (110), Expect = 3e-07
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVES 64
           ++V  V KG K   P+     C   V  +MK CW+ D + RP F  ++ E 
Sbjct: 394 DVVPRVEKGYKMDAPD----GCPPAVYDVMKNCWHLDAATRPTF-LQLREQ 439

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           +  E V KG +   P L    C + V  +M++CW  +P +RP F+T+   ++ + K
Sbjct: 323 QTREFVEKGGRLPCPEL----CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 6/59 (10%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT--EIVESVRKGEK 70
           +  E V KG +   P L    C + V  +M++CW  +P +RP F+T  + ++S+RK  +
Sbjct: 323 QTREFVEKGGRLPCPEL----CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRHR 377

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           ++V +V  G KC R  +       +V AI++ CW  +P +RP F   I++ +R 
Sbjct: 246 QVVAAV--GFKCKRLEIPR-NLNPQVAAIIEGCWTNEPWKRPSF-ATIMDLLRP 295

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 49.2 bits (118), Expect = 2e-08
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           ++V +V  G KC R  +       +V AI++ CW  +P +RP F T+   +R L K
Sbjct: 246 QVVAAV--GFKCKRLEIPR-NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           +++ SV +G +   P      C   +  +M  CW++D ++RP F+ + + +  L
Sbjct: 262 DVISSVEEGYRLPAPM----GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 45.4 bits (108), Expect = 7e-07
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 5/50 (10%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           +++ SV +G +   P      C   +  +M  CW++D ++RP F ++IV 
Sbjct: 262 DVISSVEEGYRLPAPM----GCPHALHQLMLDCWHKDRAQRPRF-SQIVS 306

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           EI   + KGE+  +P +    C  +V  IM +CW  D   RP F  L     K+
Sbjct: 227 EISSILEKGERLPQPPI----CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 13/93 (13%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           EI   + KGE+  +P +    C  +V  IM +CW  D   RP F  E++       K  R
Sbjct: 227 EISSILEKGERLPQPPI----CTIDVYMIMVKCWMIDADSRPKF-RELIIEF---SKMAR 278

Query: 74  PSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
                L  + +     +R     P++   +  L
Sbjct: 279 DPQRYLVIQGD-----ERMHLPSPTDSNFYRAL 306

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+ + + KGE+  +P +    C  +V  +M +CW  D + RP F  L     ++
Sbjct: 225 EVPDLLEKGERLAQPQI----CTIDVYMVMVKCWMIDENIRPTFKELANEFTRM 274

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 45.4 bits (108), Expect = 6e-07
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           E+ + + KGE+  +P +    C  +V  +M +CW  D + RP F  E+     +
Sbjct: 225 EVPDLLEKGERLAQPQI----CTIDVYMVMVKCWMIDENIRPTF-KELANEFTR 273

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 49.2 bits (118), Expect = 2e-08
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+ + +  G +  +P      C +E+  IM  CW  DP +RP F+ L+  + KL
Sbjct: 257 EMYDYLLHGHRLKQPE----DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 8/61 (13%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           E+ + +  G +  +P      C +E+  IM  CW  DP +RP F + +   +   EK L 
Sbjct: 257 EMYDYLLHGHRLKQPE----DCLDELYEIMYSCWRTDPLDRPTF-SVLRLQL---EKLLE 308

Query: 74  P 74
            
Sbjct: 309 S 309

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 49.2 bits (118), Expect = 2e-08
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           ++  + +++G + L P         E+  IMK CW+ DP +RP F  +   I K 
Sbjct: 255 SKFYKMIKEGFRMLSPE----HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 48.0 bits (115), Expect = 8e-08
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 8/66 (12%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           +  + +++G + L P         E+  IMK CW+ DP +RP F  +IV+ +   EK + 
Sbjct: 256 KFYKMIKEGFRMLSPE----HAPAEMYDIMKTCWDADPLKRPTF-KQIVQLI---EKQIS 307

Query: 74  PSLSEL 79
            S + +
Sbjct: 308 ESTNHI 313

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           ++V  V KG K   P      C   V  +MK CW+ D + RP F  L+  +  +
Sbjct: 222 DVVPRVEKGYKMDAPDG----CPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 45.3 bits (108), Expect = 7e-07
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVES 64
           ++V  V KG K   P+     C   V  +MK CW+ D + RP F  ++ E 
Sbjct: 222 DVVPRVEKGYKMDAPDG----CPPAVYEVMKNCWHLDAAMRPSF-LQLREQ 267

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 49.3 bits (118), Expect = 2e-08
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+ + +++G +  +PS     C  E+  +M+ CW+  PS+RP F  L   + ++
Sbjct: 301 ELFKLLKEGHRMDKPS----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 47.0 bits (112), Expect = 2e-07
 Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 5/52 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVES 64
           +E+ + +++G +  +P+     C  E+  +M+ CW+  PS+RP F  ++VE 
Sbjct: 300 EELFKLLKEGHRMDKPS----NCTNELYMMMRDCWHAVPSQRPTF-KQLVED 346

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 49.2 bits (117), Expect = 3e-08
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E    +++G +   P         E+   M  CW+ +PS+RP F+ L   +  L
Sbjct: 304 EFCRRLKEGTRMRAPDY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 47.6 bits (113), Expect = 1e-07
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 8/62 (12%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           E    +++G +   P+        E+   M  CW+ +PS+RP F +E+VE +      L+
Sbjct: 304 EFCRRLKEGTRMRAPDY----TTPEMYQTMLDCWHGEPSQRPTF-SELVEHL---GNLLQ 355

Query: 74  PS 75
            +
Sbjct: 356 AN 357

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 49.4 bits (118), Expect = 3e-08
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           ++ E + K  +  RP      C E+V  +M+ CW  +PS+RP F  +  A   +
Sbjct: 427 QVYELLEKDYRMERPEG----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 46.7 bits (111), Expect = 2e-07
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           ++ E + K  +  RP      C E+V  +M+ CW  +PS+RP F  EI +
Sbjct: 427 QVYELLEKDYRMERPEG----CPEKVYELMRACWQWNPSDRPSF-AEIHQ 471

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E++  + +G++   P      C  E+ A+M  CW     +RPDF T++  +R  
Sbjct: 221 EVMAFIEQGKRMECPP----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 45.3 bits (108), Expect = 5e-07
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           E++  + +G++   P      C  E+ A+M  CW     +RPDF   + + +R 
Sbjct: 221 EVMAFIEQGKRMECPP----ECPPELYALMSDCWIYKWEDRPDF-LTVEQRMRA 269

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E++  VR G     P      C  E+  +M+ CW++ P++RP F ++   ++++
Sbjct: 284 EVIYYVRDGNILACPE----NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 46.2 bits (110), Expect = 3e-07
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           E++  VR G     P      C  E+  +M+ CW++ P++RP F   I   +++
Sbjct: 284 EVIYYVRDGNILACPE----NCPLELYNLMRLCWSKLPADRPSF-CSIHRILQR 332

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 49.4 bits (118), Expect = 3e-08
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           +I   + +G + L+P      C + +  +M +CW+     RP F+ L + I  +
Sbjct: 304 DITVYLLQGRRLLQPE----YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 48.2 bits (115), Expect = 7e-08
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           +I   + +G + L+P      C + +  +M +CW+     RP F +E+V  +        
Sbjct: 304 DITVYLLQGRRLLQPE----YCPDPLYEVMLKCWHPKAEMRPSF-SELVSRI---SAIFS 355

Query: 74  PSLSE 78
             + E
Sbjct: 356 TFIGE 360

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
            +   ++ G +  RP      C EE+  +M +CW ++P +RP F  +   + K+
Sbjct: 260 RLFNLLKTGHRMERPD----NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 46.1 bits (110), Expect = 3e-07
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 5/50 (10%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
            +   ++ G +  RP+     C EE+  +M +CW ++P +RP F  +I +
Sbjct: 260 RLFNLLKTGHRMERPD----NCSEEMYRLMLQCWKQEPDKRPVF-ADISK 304

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           ++   + +G +  +P      C + +  +M++CW  DP+ RP F  L   + ++
Sbjct: 236 DLTHFLAQGRRLPQPE----YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 8/65 (12%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           ++   + +G +  +P      C + +  +M++CW  DP+ RP F   +V  V   E+ + 
Sbjct: 236 DLTHFLAQGRRLPQPE----YCPDSLYQVMQQCWEADPAVRPTF-RVLVGEV---EQIVS 287

Query: 74  PSLSE 78
             L +
Sbjct: 288 ALLGD 292

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+ + +++G +  +P+     C  E+  +M+ CW+  PS+RP F  L   + ++
Sbjct: 267 ELFKLLKEGHRMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCL 72
           +E+ + +++G +  +P      C  E+  +M+ CW+  PS+RP F  ++VE +   ++ L
Sbjct: 266 EELFKLLKEGHRMDKPA----NCTNELYMMMRDCWHAVPSQRPTF-KQLVEDL---DRIL 317

Query: 73  RPSLSE 78
             + +E
Sbjct: 318 TLTTNE 323

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 48.8 bits (117), Expect = 4e-08
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           +I   + +G + L+P      C + +  +M +CW+     RP F+ L + I  +
Sbjct: 240 DITVYLLQGRRLLQPE----YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 48.4 bits (116), Expect = 5e-08
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           +I   + +G + L+P      C + +  +M +CW+     RP F +E+V  +        
Sbjct: 240 DITVYLLQGRRLLQPE----YCPDPLYEVMLKCWHPKAEMRPSF-SELVSRI---SAIFS 291

Query: 74  PSLSE 78
             + E
Sbjct: 292 TFIGE 296

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+V  V +G +  RP L      + +  IM  CW+E P +RP F  L ++I  L
Sbjct: 213 EVVLKVSQGHRLYRPHL----ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 44.9 bits (107), Expect = 8e-07
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 6/59 (10%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT--EIVESVRKGEK 70
           E+V  V +G +  RP+L      + +  IM  CW+E P +RP F      +E +R+ +K
Sbjct: 213 EVVLKVSQGHRLYRPHL----ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDK 267

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 48.8 bits (117), Expect = 4e-08
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E    +++G +   P         E+   M  CW+ +PS+RP F+ L   +  L
Sbjct: 259 EFCRRLKEGTRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 46.9 bits (112), Expect = 1e-07
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 8/65 (12%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           E    +++G +   P+        E+   M  CW+ +PS+RP F +E+VE +      L+
Sbjct: 259 EFCRRLKEGTRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTF-SELVEHL---GNLLQ 310

Query: 74  PSLSE 78
            +  +
Sbjct: 311 ANAQQ 315

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 48.8 bits (117), Expect = 4e-08
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 8/66 (12%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           +++  V +G    +P+     C + +  +M+ CW  +P  RP F  EI+ S+   ++ + 
Sbjct: 248 QVLRFVMEGGLLDKPD----NCPDMLFELMRMCWQYNPKMRPSF-LEIISSI---KEEME 299

Query: 74  PSLSEL 79
           P   E+
Sbjct: 300 PGFREV 305

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 48.1 bits (115), Expect = 6e-08
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           +++  V +G    +P      C + +  +M+ CW  +P  RP F  + ++I++ 
Sbjct: 248 QVLRFVMEGGLLDKPD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+VE +  G +  +P L        V  IM  CW E P +RP F+ L   + ++
Sbjct: 213 EVVEDISTGFRLYKPRL----ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 44.9 bits (107), Expect = 8e-07
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
           E+VE +  G +  +P L        V  IM  CW E P +RP F+ 
Sbjct: 213 EVVEDISTGFRLYKPRL----ASTHVYQIMNHCWRERPEDRPAFSR 254

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 48.8 bits (117), Expect = 4e-08
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
              + ++ G K  +P        EE+  IM+ CW  D  +RP F  L + +   
Sbjct: 283 NFYKLIQNGFKMDQPF----YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 46.1 bits (110), Expect = 3e-07
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 5/50 (10%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
              + ++ G K  +P        EE+  IM+ CW  D  +RP F   +  
Sbjct: 283 NFYKLIQNGFKMDQPF----YATEEIYIIMQSCWAFDSRKRPSF-PNLTS 327

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           +++  + KG++  +P L    C   +  +M RCW+ DPS+RP FT L  ++  +
Sbjct: 222 DVIGVLEKGDRLPKPDL----CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 44.9 bits (107), Expect = 8e-07
 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 5/54 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           +++  + KG++  +P+L    C   +  +M RCW+ DPS+RP F TE+V S+  
Sbjct: 222 DVIGVLEKGDRLPKPDL----CPPVLYTLMTRCWDYDPSDRPRF-TELVCSLSD 270

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 48.4 bits (116), Expect = 5e-08
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 59  TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           TE++E + +G    RP      C +EV  +M  CW  +P +R +   +   +  L
Sbjct: 242 TEVIECITQGRVLERPR----VCPKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 45.3 bits (108), Expect = 5e-07
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           E++E + +G    RP      C +EV  +M  CW  +P +R +   EI + +  
Sbjct: 243 EVIECITQGRVLERPR----VCPKEVYDVMLGCWQREPQQRLNI-KEIYKILHA 291

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 48.0 bits (115), Expect = 6e-08
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           ++ E + K  +  RP      C E+V  +M+ CW  +PS+RP F  +  A   +
Sbjct: 220 QVYELLEKDYRMERPEG----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 44.5 bits (106), Expect = 9e-07
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
           ++ E + K  +  RP      C E+V  +M+ CW  +PS+RP F  
Sbjct: 220 QVYELLEKDYRMERPEG----CPEKVYELMRACWQWNPSDRPSFAE 261

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 48.1 bits (115), Expect = 6e-08
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+++++  G +   P      C   +  +M +CW ++ + RP F  + + + KL
Sbjct: 258 EVMKAINDGFRLPTPM----DCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           E+++++  G +   P      C   +  +M +CW ++ + RP F  +IV  + K
Sbjct: 258 EVMKAINDGFRLPTPM----DCPSAIYQLMMQCWQQERARRPKF-ADIVSILDK 306

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 48.3 bits (115), Expect = 6e-08
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           +++  +  GE+   P      C   + ++M +CW  DPS RP FT LKA +  +
Sbjct: 600 DVIGRIENGERLPMPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 45.6 bits (108), Expect = 5e-07
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           +++  +  GE+   P      C   + ++M +CW  DPS RP F TE+   +  
Sbjct: 600 DVIGRIENGERLPMPP----NCPPTLYSLMTKCWAYDPSRRPRF-TELKAQLST 648

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 48.0 bits (115), Expect = 6e-08
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+ E + +G +  +P      C++EV  +M++CW E P ERP F  +  ++ ++
Sbjct: 249 ELYEKLPQGYRLEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 10/87 (11%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           E+ E + +G +  +P      C++EV  +M++CW E P ERP F  +I+ S+    + L 
Sbjct: 249 ELYEKLPQGYRLEKPL----NCDDEVYDLMRQCWREKPYERPSF-AQILVSL---NRMLE 300

Query: 74  --PSLSELTCEEEVTAIMKRCWNEDPS 98
              +    T  E+ T     C  E+ +
Sbjct: 301 ERKTYVNTTLYEKFTYAGIDCSAEEAA 327

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 48.0 bits (115), Expect = 7e-08
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +   
Sbjct: 218 EVIQNLERGYRMVRPDN----CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVES 64
           E+++++ +G + +RP+     C EE+  +M+ CW E P +RP F   +   
Sbjct: 218 EVIQNLERGYRMVRPDN----CPEELYQLMRLCWKERPEDRPTF-DYLRSV 263

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 48.2 bits (115), Expect = 7e-08
 Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 10/91 (10%)

Query: 32  ELTCEEEVTAIM---KRCWNEDPSERPDFTTEIVESVRKGEKCLRPSL----SELTCEEE 84
           E+        I+   +  +++     P +         K    LRPS     S   C  +
Sbjct: 244 EVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK---LRPSFPNRWSSDECLRQ 300

Query: 85  VTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           +  +M  CW  +P+ R     +K  + K+++
Sbjct: 301 MGKLMTECWAHNPASRLTALRVKKTLAKMSE 331

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 43.6 bits (103), Expect = 3e-06
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 7/59 (11%)

Query: 13  DEIVESVRKGEKCLRP----NLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           +++ E V    K LRP      S   C  ++  +M  CW  +P+ R      + +++ K
Sbjct: 273 EDMREIV--CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTA-LRVKKTLAK 328

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 48.0 bits (115), Expect = 7e-08
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           +++  +  GE+   P      C   + ++M +CW  DPS RP FT LKA +  +
Sbjct: 225 DVIGRIENGERLPMPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 44.9 bits (107), Expect = 9e-07
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           +++  +  GE+   P      C   + ++M +CW  DPS RP F TE+   +  
Sbjct: 225 DVIGRIENGERLPMPP----NCPPTLYSLMTKCWAYDPSRRPRF-TELKAQLST 273

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 48.0 bits (115), Expect = 7e-08
 Identities = 11/54 (20%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           +  + V+ G +  +P+       + + +IM+ CW  +P+ RP F  + + +++ 
Sbjct: 275 KFYKLVKDGYQMAQPA----FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 13/66 (19%), Positives = 29/66 (43%), Gaps = 8/66 (12%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           +  + V+ G +  +P        + + +IM+ CW  +P+ RP F  +I   +   ++  +
Sbjct: 275 KFYKLVKDGYQMAQPA----FAPKNIYSIMQACWALEPTHRPTF-QQICSFL---QEQAQ 326

Query: 74  PSLSEL 79
               E 
Sbjct: 327 EDRRER 332

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 48.0 bits (115), Expect = 7e-08
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E  E + +G +  RP L      E+V  IM  CW+E   ERP F  L + I  +
Sbjct: 229 ETAEHIAQGLRLYRPHL----ASEKVYTIMYSCWHEKADERPTFKILLSNILDV 278

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
           E  E + +G +  RP+L      E+V  IM  CW+E   ERP F  
Sbjct: 229 ETAEHIAQGLRLYRPHL----ASEKVYTIMYSCWHEKADERPTFKI 270

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 47.7 bits (114), Expect = 8e-08
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E ++ + +G +  RP      C  EV AIM+ CW  +P +R     + A ++ L
Sbjct: 268 EAIDCITQGRELERPR----ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 45.0 bits (107), Expect = 8e-07
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           E ++ + +G +  RP      C  EV AIM+ CW  +P +R     ++   ++ 
Sbjct: 268 EAIDCITQGRELERPR----ACPPEVYAIMRGCWQREPQQRHSI-KDVHARLQA 316

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 47.7 bits (114), Expect = 8e-08
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+ + +++G +  +P+     C  E+  +M+ CW+  PS+RP F  L   + ++
Sbjct: 313 ELFKLLKEGHRMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 46.2 bits (110), Expect = 3e-07
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 5/51 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           +E+ + +++G +  +P      C  E+  +M+ CW+  PS+RP F  ++VE
Sbjct: 312 EELFKLLKEGHRMDKPA----NCTNELYMMMRDCWHAVPSQRPTF-KQLVE 357

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 47.0 bits (112), Expect = 2e-07
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           +++++V +G +   P      C   +  +M  CW +D + RP F  + + + KL
Sbjct: 258 DVIKAVDEGYRLPPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 44.3 bits (105), Expect = 1e-06
 Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 8/93 (8%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           +++++V +G +   P      C   +  +M  CW +D + RP F  +IV  +   +K +R
Sbjct: 258 DVIKAVDEGYRLPPPM----DCPAALYQLMLDCWQKDRNNRPKF-EQIVSIL---DKLIR 309

Query: 74  PSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
              S                ++   +   F T 
Sbjct: 310 NPGSLKIITSAAARPSNLLLDQSNVDITTFRTT 342

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E++E V  G +   P      C   V  IM +CW   P +RP+F  +   I   
Sbjct: 253 EVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 8/60 (13%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           E++E V  G +   P      C   V  IM +CW   P +RP+F   I+E +   E C +
Sbjct: 253 EVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNF-AIILERI---EYCTQ 304

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 8/54 (14%), Positives = 18/54 (33%), Gaps = 6/54 (11%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
             ++      +   P         E+  ++  C + +P  RP F  +   +  L
Sbjct: 226 RKLQFYEDRHQLPAP------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 42.3 bits (100), Expect = 7e-06
 Identities = 7/46 (15%), Positives = 15/46 (32%), Gaps = 6/46 (13%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
             ++      +   P         E+  ++  C + +P  RP F  
Sbjct: 226 RKLQFYEDRHQLPAP------KAAELANLINNCMDYEPDHRPSFRA 265

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 46.6 bits (111), Expect = 2e-07
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E++E V  G +   P      C   V  IM +CW   P +RP+F  +   I   
Sbjct: 294 EVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 8/60 (13%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           E++E V  G +   P      C   V  IM +CW   P +RP+F   I+E +   E C +
Sbjct: 294 EVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNF-AIILERI---EYCTQ 345

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 45.7 bits (109), Expect = 4e-07
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK 112
           ++VE +R  +    P      C   V A+M  CWNE PS RP F  + + +R 
Sbjct: 238 DVVEMIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 286

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVES 64
           ++VE +R  +    P+     C   V A+M  CWNE PS RP F  +I   
Sbjct: 238 DVVEMIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRF-KDIHSR 283

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 45.0 bits (107), Expect = 8e-07
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 1/62 (1%)

Query: 54  RPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
            PD+    ++        L        C      I  RC + DP +RP F  L+  +  L
Sbjct: 222 DPDYLPRTMDFGLNVRGFLDRYCPP-NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL 280

Query: 114 NK 115
             
Sbjct: 281 RM 282

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 42.7 bits (101), Expect = 5e-06
 Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)

Query: 23  EKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
              L        C      I  RC + DP +RP F  ++  
Sbjct: 237 RGFLDRYCPP-NCPPSFFPITVRCCDLDPEKRPSF-VKLEH 275

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 5/56 (8%)

Query: 60  EIVESV-RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN 114
           +I+  + ++GE+  RP      C +++  +M +CW   P +RP F  L+  + +  
Sbjct: 232 QILHKIDKEGERLPRPED----CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 14  EIVESV-RKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT 59
           +I+  + ++GE+  RP      C +++  +M +CW   P +RP F  
Sbjct: 232 QILHKIDKEGERLPRPED----CPQDIYNVMVQCWAHKPEDRPTFVA 274

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 43.6 bits (103), Expect = 2e-06
 Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 44  KRCWNEDPSERPDFTTEIVESVRKGEKCLRPSLSELT----CEEEVTAIMKRCWNEDPSE 99
           +  + +     P    E+ + V   E+ LRP++            +  IM+ CW  + + 
Sbjct: 264 QLPYYDLVPSDPSVE-EMRKVV--CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 320

Query: 100 RPDFTTLKAAIRKLNK 115
           R     +K  + +L++
Sbjct: 321 RLTALRIKKTLSQLSQ 336

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 40.9 bits (96), Expect = 2e-05
 Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 7/59 (11%)

Query: 13  DEIVESVRKGEKCLRPNLSELT----CEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           +E+ + V   E+ LRPN+            +  IM+ CW  + + R      I +++ +
Sbjct: 278 EEMRKVV--CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA-LRIKKTLSQ 333

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 42.7 bits (101), Expect = 4e-06
 Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 10/90 (11%)

Query: 32  ELTCEEEVTAI---MKRCWNEDPSERPDFTTEIVESVRKGEKCLRPSL----SELTCEEE 84
           E+        I    K  + +     P F  ++ + V       RP++            
Sbjct: 215 EVARRMVSNGIVEDYKPPFYDVVPNDPSFE-DMRKVV--CVDQQRPNIPNRWFSDPTLTS 271

Query: 85  VTAIMKRCWNEDPSERPDFTTLKAAIRKLN 114
           +  +MK CW ++PS R     +K  + K++
Sbjct: 272 LAKLMKECWYQNPSARLTALRIKKTLTKID 301

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 7/59 (11%)

Query: 13  DEIVESVRKGEKCLRP----NLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           +++ + V       RP              +  +MK CW ++PS R      I +++ K
Sbjct: 244 EDMRKVV--CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA-LRIKKTLTK 299

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 41.4 bits (97), Expect = 2e-05
 Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 17/92 (18%)

Query: 42  IMKRCWNEDPSERPD-----FTTEI-----VESVRK--GEKCLRPSLSELTCEEEVT--- 86
           I  RC +  P E        F TE+      E ++     +  RP   E   E  +    
Sbjct: 228 IFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRS 287

Query: 87  --AIMKRCWNEDPSERPDFTTLKAAIRKLNKI 116
               ++ CW++D   R      +  + +L  I
Sbjct: 288 LKETIEDCWDQDAEARLTAQXAEERMAELMMI 319

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 37.1 bits (86), Expect = 5e-04
 Identities = 8/41 (19%), Positives = 14/41 (34%), Gaps = 5/41 (12%)

Query: 22  GEKCLRPNLSELTCEEEVT-----AIMKRCWNEDPSERPDF 57
             +  RP   E   E  +        ++ CW++D   R   
Sbjct: 266 SREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTA 306

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 4/52 (7%)

Query: 68  GEKCLRPSLSELTCEEEVTA----IMKRCWNEDPSERPDFTTLKAAIRKLNK 115
             K  RP L +   +    A     ++ CW+ D   R     +   I ++ +
Sbjct: 267 VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 7/59 (11%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTA----IMKRCWNEDPSERPDFTTEIVESVRK 67
           +++ E V    K  RP L +   +    A     ++ CW+ D   R      + E + +
Sbjct: 260 EDMQEVV--VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA-GCVGERITQ 315

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	116
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.95
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.95
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.94
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.93
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.93
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.87
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.84
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.84
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.84
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.83
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.83
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.82
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.82
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.81
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.81
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.8
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.8
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.78
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.78
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.78
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.78
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.78
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.78
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.78
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.78
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.77
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.77
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.77
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.77
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.77
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.77
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.77
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.77
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.76
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.76
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.76
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.76
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.76
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.75
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.75
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.75
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.74
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.74
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.74
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.74
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.74
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.74
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.74
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.74
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.73
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.73
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.73
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.72
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.72
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.72
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.72
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.71
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.71
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.71
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.71
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.71
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.71
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.71
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.71
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.7
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.7
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.69
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.69
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.69
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.69
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.69
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.69
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.69
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.69
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.69
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.69
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.68
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.68
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.68
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.68
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.67
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.67
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.67
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.67
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.67
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.66
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.66
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.66
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.65
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.65
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.65
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.65
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.65
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.64
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.64
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.64
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.64
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.64
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.64
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.63
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.63
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.63
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.63
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.63
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.62
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.62
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.62
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.62
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.61
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.61
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.61
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.61
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.61
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.61
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.61
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.61
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.6
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.6
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.6
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.6
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.6
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.6
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.6
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.6
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.6
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.6
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.59
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.59
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.59
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.59
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.59
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.58
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.58
3bhy_A	283	Death-associated protein kinase 3; death associate	99.58
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.58
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.58
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.57
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.57
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.57
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.57
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.57
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.57
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.57
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.57
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.56
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.56
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.56
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.56
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.56
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.56
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.56
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.56
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.56
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.56
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.56
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.55
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.55
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.55
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.55
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.55
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.55
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.55
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.55
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.55
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.54
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.54
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.54
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.54
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.54
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.53
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.53
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.53
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.53
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.53
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.53
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.52
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.52
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.51
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.51
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.51
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.51
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.51
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.5
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.5
3niz_A	311	Rhodanese family protein; structural genomics, str	99.5
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.5
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.5
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.5
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.5
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.49
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.49
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.49
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.49
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.49
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.49
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.48
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.48
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.48
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.48
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.48
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.48
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.48
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.48
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.48
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.48
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.48
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.47
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.47
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.47
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.47
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.47
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.47
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.47
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.47
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.47
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.47
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.47
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.46
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.46
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.46
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.46
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.46
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.46
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.45
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.45
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.45
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.45
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.45
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.44
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.44
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.44
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.43
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.43
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.42
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.42
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.41
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.4
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.39
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.38
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.37
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.36
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.34
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.33
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.32
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.31
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.29
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.28
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.23
3uqc_A	286	Probable conserved transmembrane protein; structur	99.17
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.95
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	97.71
4aoj_A	329	High affinity nerve growth factor receptor; transf	97.48
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	97.34
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	96.81
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	96.06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	95.96
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	95.89
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	95.84
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	95.53
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	95.47
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	95.39
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	95.36
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	94.55
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	94.31
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	93.63
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	93.28
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	93.2
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	93.04
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	92.93
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	92.78
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	92.66
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	92.46
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	92.23
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	92.09
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	91.98
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	91.97
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	91.92
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	91.74
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	91.72
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	91.66
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	91.31
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	91.02
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	90.88
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	90.33
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	90.33
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	90.31
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	90.27
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	90.22
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	90.14
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	89.31
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	89.02
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	88.93
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	88.78
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	88.62
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	88.37
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	88.34
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	88.3
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	87.88
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	87.7
3pls_A	298	Macrophage-stimulating protein receptor; protein k	86.86
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	86.77
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	86.5
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	86.32
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	86.27
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	85.96
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	85.34
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	84.94
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	84.87
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	84.14
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	84.08
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	83.81
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	83.46
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	83.45
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	83.17
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	82.65
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	82.27
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	81.13

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.95  E-value=9.6e-29  Score=158.68  Aligned_cols=110  Identities=24%  Similarity=0.442  Sum_probs=85.4

Q ss_pred             eeecCCCCCCHHHHHHH---Hh---cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCC-CCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES---VR---KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPS-ERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~---~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~-~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++.-....   ..   .| .++++||.   ..|+.++||||||+++||+.+. ..|+..   .++...+..
T Consensus       183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~  262 (308)
T 4gt4_A          183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN  262 (308)
T ss_dssp             CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHT
T ss_pred             CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            69999999986421110   00   11 24678885   4689999999999999999884 555332   477888888


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.+++.|.    .|+.++++||.+||+.||++||+|.+|+..|+.+..
T Consensus       263 ~~~~~~p~----~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n  306 (308)
T 4gt4_A          263 RQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN  306 (308)
T ss_dssp             TCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred             CCCCCCcc----cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence            88776665    899999999999999999999999999999987643

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.95  E-value=5.8e-28  Score=156.26  Aligned_cols=111  Identities=25%  Similarity=0.487  Sum_probs=83.2

Q ss_pred             CeeecCCCCCCHHHHH---HHHh---cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          1 MRVELSDLRILRDEIV---ESVR---KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~~---~~~~---~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      .++||+|||+++.-..   ....   .| ..+++||.   ..|+.++||||||+++||+.+ ++.|+..   .++...+.
T Consensus       195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~  274 (329)
T 4aoj_A          195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT  274 (329)
T ss_dssp             TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHH
T ss_pred             CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            4799999999974211   1111   12 24778886   458899999999999999988 5666432   46777888


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+.++..|.    .|++++.+||.+||+.||++||||.+|+..|+.+.+
T Consensus       275 ~g~~~~~p~----~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          275 QGRELERPR----ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             HTCCCCCCT----TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             cCCCCCCcc----cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence            888777776    799999999999999999999999999999998764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.94  E-value=8.3e-28  Score=153.81  Aligned_cols=110  Identities=24%  Similarity=0.472  Sum_probs=86.9

Q ss_pred             eeecCCCCCCHHHHHHHH---h---cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVESV---R---KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~---~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++.......   .   .| .++++||.   ..|+.++||||||+++||+.+ ++.|+..   .++...+..
T Consensus       166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~  245 (299)
T 4asz_A          166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ  245 (299)
T ss_dssp             CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH
T ss_pred             cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            699999999974321110   0   12 24778886   458999999999999999988 5656432   477888888


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.++..|.    .|+.++++||.+||+.||++||||++|+..|+.+.+
T Consensus       246 ~~~~~~p~----~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~  289 (299)
T 4asz_A          246 GRVLQRPR----TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK  289 (299)
T ss_dssp             TCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCc----cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            88776666    799999999999999999999999999999988754

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.93  E-value=8.2e-28  Score=156.77  Aligned_cols=110  Identities=24%  Similarity=0.400  Sum_probs=85.6

Q ss_pred             eeecCCCCCCHHHHH--HHHh----cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV--ESVR----KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~----~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~----~~~~~~l~   66 (116)
                      +|||+|||+++.-..  ....    .| .++++||.   ..|+.++||||||+++||+.+ +..|+..    ..+...+.
T Consensus       223 ~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~  302 (353)
T 4ase_A          223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK  302 (353)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH
T ss_pred             CEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHH
Confidence            699999999963111  0011    12 24778886   458999999999999999988 4555322    35677788


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+.++..|.    .+++++++||.+||+.||++||||.+|+..|+.+.+
T Consensus       303 ~g~~~~~p~----~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          303 EGTRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             HTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCCCCCCCc----cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence            888777776    799999999999999999999999999999988754

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.93  E-value=6.5e-26  Score=145.40  Aligned_cols=112  Identities=18%  Similarity=0.280  Sum_probs=81.5

Q ss_pred             eeecCCCCCCHHHH----HHHH--hcC-CCCCCCCcC------cccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHH
Q psy12612          2 RVELSDLRILRDEI----VESV--RKG-EKCLRPNLS------ELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~----~~~~--~~g-~~~~~p~~~------~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~   64 (116)
                      +|||+|||+|+...    ....  ..| ..+++||+.      .|+.++||||||+++||+.+++.|+..    ..+...
T Consensus       170 ~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~  249 (307)
T 3omv_A          170 TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM  249 (307)
T ss_dssp             EEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH
T ss_pred             cEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHH
Confidence            69999999985311    1111  123 357888852      378899999999999999998877532    245556


Q ss_pred             HhcCCCCCC-CCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         65 VRKGEKCLR-PSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        65 l~~~~~~~~-p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +..+...+. +.++ ..|+.++.+||.+||+.||++||||.+|+..|+.+.
T Consensus       250 ~~~~~~~p~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~  299 (307)
T 3omv_A          250 VGRGYASPDLSKLY-KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ  299 (307)
T ss_dssp             HHTTCCCCCSTTSC-TTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred             HhcCCCCCCccccc-ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            666654322 2222 378999999999999999999999999999988775

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.87  E-value=1.1e-23  Score=135.06  Aligned_cols=115  Identities=17%  Similarity=0.247  Sum_probs=73.7

Q ss_pred             CeeecCCCCCCHHHHH--------HHHhcCC-CCCCCCcC---------cccCHHHHHHHHHHhcccCCCCC--------
Q psy12612          1 MRVELSDLRILRDEIV--------ESVRKGE-KCLRPNLS---------ELTCEEEVTAIMKRCWNEDPSER--------   54 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~~--------~~~~~g~-~~~~p~~~---------~~~~~~dv~s~g~~~we~~~~~~--------   54 (116)
                      .++||+|||+++....        .....|. .+++||+.         .|+.++||||||+++||+.++..        
T Consensus       145 ~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~  224 (303)
T 3hmm_A          145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY  224 (303)
T ss_dssp             SCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCC
T ss_pred             CCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccc
Confidence            3699999999852100        0011132 57788852         35678999999999999765422        


Q ss_pred             --CCCh--------HHHHHHHh-cCCCCCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         55 --PDFT--------TEIVESVR-KGEKCLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        55 --p~~~--------~~~~~~l~-~~~~~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                        |...        .++...+. .+.++..|... ...++..+.+||.+||+.||++||||.+|+..|+.+.+
T Consensus       225 ~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          225 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             CCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence              2111        13333332 23333222211 12356789999999999999999999999999988753

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.84  E-value=1.1e-21  Score=131.43  Aligned_cols=110  Identities=23%  Similarity=0.421  Sum_probs=83.1

Q ss_pred             eeecCCCCCCHHHHHHH-Hhc-CCCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVES-VRK-GEKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~-g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      ++||+|||+++...... ... ...+.+||.   ..++.++||||||+++||+.+ +..|...   .++...+..+.++.
T Consensus       327 ~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~  406 (450)
T 1k9a_A          327 VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD  406 (450)
T ss_dssp             CEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCC
T ss_pred             CEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            58999999986321111 111 124667775   347889999999999999987 5544321   25677788888766


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .|.    .++.++.+||.+||..||.+||+|.+|+..|+.+.+
T Consensus       407 ~p~----~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~  445 (450)
T 1k9a_A          407 APD----GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT  445 (450)
T ss_dssp             CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCC----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            665    799999999999999999999999999999998764

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.84  E-value=3.9e-22  Score=127.05  Aligned_cols=104  Identities=20%  Similarity=0.253  Sum_probs=75.7

Q ss_pred             eeecCCCCCCHHHHHHHHh--cCC-CCCCCCc--CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVESVR--KGE-KCLRPNL--SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~--~g~-~~~~p~~--~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~~~~   72 (116)
                      +|||+|||+++........  .|. .+++||+  ..|+.++||||||+++||+.++..|+..    .++...+..+..+.
T Consensus       170 ~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~  249 (290)
T 3fpq_A          170 SVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA  249 (290)
T ss_dssp             CEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG
T ss_pred             CEEEEeCcCCEeCCCCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCC
Confidence            6899999999631111111  132 4778886  4589999999999999999998887532    35556666665322


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .  + +..+++++.+|+.+||..||++|||+.+++.
T Consensus       250 ~--~-~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          250 S--F-DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             G--G-GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             C--C-CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1  1 1257788999999999999999999999864

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.84  E-value=1.9e-21  Score=126.58  Aligned_cols=103  Identities=14%  Similarity=0.193  Sum_probs=77.6

Q ss_pred             eeecCCCCCCHH----HHHHHHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRD----EIVESVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~----~~~~~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      +|||+|||+++.    ........|. .+++||+   ..|+.++||||+|+++||+..+..|+..   .+++..+..+..
T Consensus       163 ~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~  242 (350)
T 4b9d_A          163 TVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF  242 (350)
T ss_dssp             CEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC
T ss_pred             CEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC
Confidence            699999999852    1111112243 5788886   3578899999999999999998877543   356666666654


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +..+.    .++.++.+|+.+||..||++|||+.+++.
T Consensus       243 ~~~~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          243 PPVSL----HYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCc----cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            33333    68899999999999999999999999864

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.83  E-value=3.1e-21  Score=129.30  Aligned_cols=110  Identities=24%  Similarity=0.439  Sum_probs=83.7

Q ss_pred             eeecCCCCCCHHHH--HHHHhcCC----CCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEI--VESVRKGE----KCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~--~~~~~~g~----~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||+++...  ......+.    .+.+||.   ..++.++||||||+++||+.+ +..|...   .++...+..+
T Consensus       322 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~  401 (454)
T 1qcf_A          322 VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG  401 (454)
T ss_dssp             CEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT
T ss_pred             cEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            68999999986311  11111121    3567775   347889999999999999988 5555321   3677778888


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+...|.    .++.++.+||.+||..||++||+|.+|+..|+.+..
T Consensus       402 ~~~~~~~----~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          402 YRMPRPE----NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             CCCCCCC----CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence            8766665    799999999999999999999999999999998754

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.83  E-value=8.1e-22  Score=129.37  Aligned_cols=110  Identities=25%  Similarity=0.461  Sum_probs=81.5

Q ss_pred             eeecCCCCCCHHHHHHHH--hcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVESV--RKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++.......  ..+     ..+.+||.   ..++.++||||||+++||+.+ +..|...   .++...+..
T Consensus       251 ~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~  330 (377)
T 3cbl_A          251 VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK  330 (377)
T ss_dssp             CEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHT
T ss_pred             cEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            589999999863111000  001     12566764   347889999999999999987 4444321   356667777


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.+...|.    .++.++.+||.+||+.||++||+|.+|+..|+.+.+
T Consensus       331 ~~~~~~~~----~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          331 GGRLPCPE----LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             TCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCC----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence            77766665    689999999999999999999999999999998753

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.82  E-value=2.2e-20  Score=129.20  Aligned_cols=109  Identities=21%  Similarity=0.412  Sum_probs=82.7

Q ss_pred             eeecCCCCCCHHH----H-HHHHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDE----I-VESVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~----~-~~~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||+++..    . ......+   ..+.+||.   ..++.++||||||+++||+.+ +..|...   .++...+.
T Consensus       474 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~  553 (613)
T 2ozo_A          474 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE  553 (613)
T ss_dssp             EEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH
T ss_pred             cEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Confidence            6899999998631    1 1111111   24667775   357889999999999999987 5555322   46778888


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+.++..|.    .++.++.+||.+||..+|.+||+|.+|+..|+.+.
T Consensus       554 ~~~~~~~p~----~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~  597 (613)
T 2ozo_A          554 QGKRMECPP----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  597 (613)
T ss_dssp             TTCCCCCCT----TCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             cCCCCCCCC----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            888766665    79999999999999999999999999999998764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.82  E-value=1e-20  Score=126.76  Aligned_cols=110  Identities=22%  Similarity=0.359  Sum_probs=81.7

Q ss_pred             eeecCCCCCCHHHHHH--HHhc---C-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE--SVRK---G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~---g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||+++.....  ....   + ..+.+||.   ..++.++||||||+++||+.+ +..|...   .++...+..+
T Consensus       318 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~  397 (452)
T 1fmk_A          318 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG  397 (452)
T ss_dssp             CEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT
T ss_pred             CEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            6899999998642111  1111   1 23567775   347889999999999999988 4444321   3677778888


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .++..|.    .++.++.+||.+||..+|++||+|.+|...|+.+..
T Consensus       398 ~~~~~~~----~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          398 YRMPCPP----ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             CCCCCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            8766665    799999999999999999999999999999988753

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.81  E-value=3.4e-21  Score=124.82  Aligned_cols=110  Identities=11%  Similarity=0.145  Sum_probs=76.7

Q ss_pred             eeecCCCCCCHH----HHHHHH-h----cCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRD----EIVESV-R----KGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~----~~~~~~-~----~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      +|||+|||+++.    ...... .    .|. .+++||+   ..|+.++||||+|+++||+.++..|+..   .++...+
T Consensus       189 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i  268 (336)
T 4g3f_A          189 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKI  268 (336)
T ss_dssp             CEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHH
T ss_pred             EEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH
Confidence            599999999852    111111 1    132 4678886   3588999999999999999988877532   1344445


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      ..+.... +.+++ .+++++.+++.+||..||.+|||+.||+..|...
T Consensus       269 ~~~~~~~-~~~~~-~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          269 ASEPPPI-REIPP-SCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             HHSCCGG-GGSCT-TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HcCCCCc-hhcCc-cCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            4443211 11222 6889999999999999999999999998877654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.81  E-value=2.2e-20  Score=127.46  Aligned_cols=110  Identities=23%  Similarity=0.387  Sum_probs=83.0

Q ss_pred             eeecCCCCCCHHHH--HHHHhcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEI--VESVRKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~--~~~~~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||+++...  ......+    ..+.+||.   ..++.++||||||+++||+.. +..|...   .++...+..+
T Consensus       401 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~  480 (535)
T 2h8h_A          401 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG  480 (535)
T ss_dssp             CEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTT
T ss_pred             cEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            68999999986311  1111111    13566764   347889999999999999998 4444322   3677788888


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .++..|.    .++.++.+||.+||..||++||+|.+|+..|+.+..
T Consensus       481 ~~~~~~~----~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          481 YRMPCPP----ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             CCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             CCCCCCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            8766665    799999999999999999999999999999988753

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=3.4e-20  Score=121.66  Aligned_cols=109  Identities=22%  Similarity=0.457  Sum_probs=76.4

Q ss_pred             eeecCCCCCCHHHHHHH---H--hcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVES---V--RKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~--~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l   65 (116)
                      ++||+|||+++......   .  ..+    ..+.+||.   ..++.++||||||+++|++..+..|.|.    .++...+
T Consensus       230 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~  309 (373)
T 3c1x_A          230 TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL  309 (373)
T ss_dssp             CEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHH
T ss_pred             CEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHH
Confidence            68999999986321110   0  011    13566764   3468899999999999999886666553    2455566


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ..+.+...|.    .++.++.++|.+||..+|.+||++.+|+..|+.+.
T Consensus       310 ~~~~~~~~p~----~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~  354 (373)
T 3c1x_A          310 LQGRRLLQPE----YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  354 (373)
T ss_dssp             HTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HcCCCCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            7777665555    78999999999999999999999999999998875

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.80  E-value=1.1e-19  Score=126.16  Aligned_cols=109  Identities=21%  Similarity=0.428  Sum_probs=82.3

Q ss_pred             eeecCCCCCCHHH----H-HHHHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDE----I-VESVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~----~-~~~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||+++.-    . ......+   ..+.+||.   ..++.++||||||+++||+.+ +..|...   .++...+.
T Consensus       507 ~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~  586 (635)
T 4fl3_A          507 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE  586 (635)
T ss_dssp             EEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred             CEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            6899999998631    1 1111111   23567775   357889999999999999987 6555432   36777888


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+.+...|.    .++.++.+||..||..||++||++.+|+..|+.+.
T Consensus       587 ~~~~~~~p~----~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~  630 (635)
T 4fl3_A          587 KGERMGCPA----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  630 (635)
T ss_dssp             TTCCCCCCT----TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             cCCCCCCCC----CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            888766665    79999999999999999999999999999998874

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.78  E-value=1.1e-19  Score=115.35  Aligned_cols=110  Identities=20%  Similarity=0.400  Sum_probs=77.3

Q ss_pred             eeecCCCCCCHHHHHH----HHh-cC---CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------------
Q psy12612          2 RVELSDLRILRDEIVE----SVR-KG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------------   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~-~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------------   58 (116)
                      ++||+|||++......    ... .+   ..+.+||.   ..++.++||||||+++|++.++..|...            
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~  231 (295)
T 3ugc_A          152 RVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND  231 (295)
T ss_dssp             EEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTT
T ss_pred             eEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCc
Confidence            6899999998632111    111 11   12566764   3468899999999999998876655332            


Q ss_pred             -------HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         59 -------TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        59 -------~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                             ..+...+..+.+...|.    .++.++.+||.+||+.||++||++.+|+..|+.+.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~  291 (295)
T 3ugc_A          232 KQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  291 (295)
T ss_dssp             CCTHHHHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccchhHHHHHHHHhccCcCCCCc----CcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence                   02334445555554554    789999999999999999999999999999998753

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.78  E-value=1.4e-19  Score=118.41  Aligned_cols=109  Identities=24%  Similarity=0.409  Sum_probs=80.5

Q ss_pred             eeecCCCCCCHHHHHHHH-hc-----C-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVESV-RK-----G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-~~-----g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      .+||+|||+++....... ..     | ..+.+||.   ..++.++||||||+++|++.+ +..|...   .++...+..
T Consensus       222 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~  301 (367)
T 3l9p_A          222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS  301 (367)
T ss_dssp             CEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT
T ss_pred             eEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            489999999864321110 00     1 12556764   346889999999999999987 4444322   366677777


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.+...|.    .++.++.+|+.+||+.+|.+||++.+|+..|+.+.
T Consensus       302 ~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~  344 (367)
T 3l9p_A          302 GGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  344 (367)
T ss_dssp             TCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCc----cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            77655554    78899999999999999999999999999998764

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.78  E-value=2e-19  Score=117.97  Aligned_cols=109  Identities=23%  Similarity=0.452  Sum_probs=75.2

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||+++.....     ....+   ..+.+||.   ..++.++||||||+++||+.. +..|...   .++...+.
T Consensus       185 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~  264 (373)
T 2qol_A          185 VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD  264 (373)
T ss_dssp             CEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHH
T ss_pred             CEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            6899999998632111     11111   13667775   346889999999999999776 6666432   35666777


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+.+...+.    .++.++.+||.+||+.+|.+||++.+|+..|+.+.
T Consensus       265 ~~~~~~~~~----~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~  308 (373)
T 2qol_A          265 EGYRLPPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI  308 (373)
T ss_dssp             TTEECCCCT----TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCCCCCCc----cccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence            766554444    68899999999999999999999999999998874

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.78  E-value=2.4e-19  Score=113.44  Aligned_cols=102  Identities=13%  Similarity=0.092  Sum_probs=71.6

Q ss_pred             eeecCCCCCCHHHHHHH---HhcCC-CCCCCCc---Ccc-cCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES---VRKGE-KCLRPNL---SEL-TCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g~-~~~~p~~---~~~-~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++......   ...|. .+++||.   ..| +.++||||+|+++|++.++..|+..   .++...+..+..
T Consensus       150 ~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~  229 (275)
T 3hyh_A          150 NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY  229 (275)
T ss_dssp             CEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             CEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC
Confidence            68999999996422111   11233 4678886   233 4689999999999999998887543   355566665543


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      . .|.    .+++++.+|+.+|+..||++|||+.+++.
T Consensus       230 ~-~p~----~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          230 T-LPK----FLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             C-CCT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             C-CCC----CCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            2 232    68899999999999999999999999875

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.78  E-value=1.8e-19  Score=116.36  Aligned_cols=110  Identities=22%  Similarity=0.435  Sum_probs=80.9

Q ss_pred             eeecCCCCCCHHHHHH------HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE------SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~------~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||++......      ....+ ..+.+||.   ..++.++||||||+++|++.+ +..|...   .++...+..
T Consensus       212 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  291 (343)
T 1luf_A          212 VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRD  291 (343)
T ss_dssp             CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT
T ss_pred             eEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhC
Confidence            6899999998642110      00011 12556664   346889999999999999988 5556433   356666777


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.....|.    .++.++.+|+.+||..+|.+||++.+|+..|+.+.+
T Consensus       292 ~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          292 GNILACPE----NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             TCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             CCcCCCCC----CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence            76544444    688999999999999999999999999999998753

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.78  E-value=5.4e-20  Score=120.55  Aligned_cols=110  Identities=22%  Similarity=0.458  Sum_probs=80.7

Q ss_pred             eeecCCCCCCHHHHH----HHHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV----ESVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++....    .....+   ..+.+||.   ..++.++||||||+++||+.. +..|...   .++...+..
T Consensus       241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~  320 (370)
T 2psq_A          241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE  320 (370)
T ss_dssp             CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT
T ss_pred             CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc
Confidence            589999999852100    000111   13566764   346889999999999999887 5444321   356667777


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.+...|.    .++.++.++|.+||..+|.+||++.+|+..|+.+..
T Consensus       321 ~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          321 GHRMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             TCCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            77655554    789999999999999999999999999999998753

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.78  E-value=1.7e-20  Score=126.94  Aligned_cols=109  Identities=23%  Similarity=0.452  Sum_probs=80.7

Q ss_pred             eeecCCCCCCHHHHHHH--HhcC----CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES--VRKG----EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      ++||+|||+++......  ...+    ..+.+||.   ..++.++||||||+++||+.+...+.|.    .++...+..+
T Consensus       356 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~  435 (495)
T 1opk_A          356 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD  435 (495)
T ss_dssp             CEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT
T ss_pred             cEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            58999999985311000  0011    13556664   3478899999999999999884333332    2566777778


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+...|.    .++.++.+||.+||..||.+||++.+|+..|+.+.
T Consensus       436 ~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          436 YRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             CCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             CCCCCCC----CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            7766665    79999999999999999999999999999998764

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=8.3e-19  Score=113.37  Aligned_cols=110  Identities=21%  Similarity=0.456  Sum_probs=77.8

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||++......     ....+   ..+.+||.   ..++.++||||||+++|++.. +..|...   .++...+.
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~  264 (333)
T 1mqb_A          185 VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN  264 (333)
T ss_dssp             CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH
T ss_pred             cEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH
Confidence            6899999998642111     01111   13556764   346788999999999999877 6666432   35666777


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+.+...|.    .++.++.+|+.+||+.+|.+||++.+|+..|+.+.+
T Consensus       265 ~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  309 (333)
T 1mqb_A          265 DGFRLPTPM----DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  309 (333)
T ss_dssp             TTCCCCCCT----TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCcCCCcc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            776554444    688999999999999999999999999999988753

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.77  E-value=3.1e-19  Score=115.04  Aligned_cols=109  Identities=24%  Similarity=0.359  Sum_probs=79.6

Q ss_pred             eeecCCCCCCHHHHH------HHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV------ESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~------~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++....      .....+ ..+.+||.   ..++.++||||||+++|++.+ +..|...   .++...+..
T Consensus       155 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  234 (327)
T 3poz_A          155 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK  234 (327)
T ss_dssp             EEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT
T ss_pred             CEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHc
Confidence            689999999863210      011111 13566764   346889999999999999888 5555322   256666777


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.+...|.    .++.++.+++.+||..+|.+||++.+++..|+.+.
T Consensus       235 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          235 GERLPQPP----ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             TCCCCCCT----TBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCc----cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            76655554    68899999999999999999999999999998765

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.77  E-value=7.5e-19  Score=112.63  Aligned_cols=110  Identities=23%  Similarity=0.404  Sum_probs=74.4

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHh-cCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVR-KGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~-~~~   69 (116)
                      ++||+|||+++......    ...| ..+.+||.   ..++.++||||||+++|++..+..|...   .++...+. ...
T Consensus       177 ~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~  256 (309)
T 3p86_A          177 TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK  256 (309)
T ss_dssp             CEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCC
T ss_pred             cEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC
Confidence            68999999986322111    1112 23566764   3367899999999999999888777543   23444443 333


Q ss_pred             CCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         70 KCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        70 ~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +...|.    .++.++.+|+.+||..+|.+||++.+|++.|+.+.+
T Consensus       257 ~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          257 RLEIPR----NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             CCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             CCCCCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            333343    688999999999999999999999999999988754

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.77  E-value=2.7e-20  Score=121.01  Aligned_cols=105  Identities=18%  Similarity=0.180  Sum_probs=74.7

Q ss_pred             eeecCCCCCCHHHHHH--H--HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE--S--VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~--~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      +|||+|||+++.-...  .  ...|. .+++||+   ..|+.++||||+|+++||+..+..|+..   .+++..+..+..
T Consensus       208 ~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~  287 (346)
T 4fih_A          208 RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP  287 (346)
T ss_dssp             CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC
T ss_pred             CEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC
Confidence            6899999998531000  0  01122 3678886   3589999999999999999998888654   245556655442


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...+.  ...+++++.+|+.+||..||++|||+.+++.
T Consensus       288 ~~~~~--~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          288 PRLKN--LHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             CCCSC--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCCc--cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11111  1267899999999999999999999999864

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.77  E-value=2e-19  Score=115.83  Aligned_cols=110  Identities=20%  Similarity=0.382  Sum_probs=80.7

Q ss_pred             eeecCCCCCCHHHH-------HHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEI-------VESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~-------~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||+++...       .........+.+||.   ..++.++||||||+++|++.+ +..|...   .++...+..
T Consensus       153 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~  232 (325)
T 3kex_A          153 QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK  232 (325)
T ss_dssp             CEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHT
T ss_pred             eEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHc
Confidence            58999999985310       011111124566765   346889999999999999888 6655432   256667777


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.+...|.    .++.++.+++.+||..||.+||++.+++..|+.+.+
T Consensus       233 ~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          233 GERLAQPQ----ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             TCBCCCCT----TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             CCCCCCCC----cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            76655555    688889999999999999999999999999988753

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.77  E-value=4.4e-19  Score=112.03  Aligned_cols=109  Identities=26%  Similarity=0.436  Sum_probs=73.0

Q ss_pred             eeecCCCCCCHHHHHHH---H--hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES---V--RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~--~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||++.......   .  ..+ ..+.+||.   ..++.++||||||+++|++.. +..|...   .++...+..+
T Consensus       154 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~  233 (281)
T 1mp8_A          154 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG  233 (281)
T ss_dssp             EEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT
T ss_pred             CEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcC
Confidence            68999999986421111   1  111 13566764   346788999999999999876 5444321   2556667666


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+...|.    .++.++.+++.+||+.||.+||++.++...|+.+.
T Consensus       234 ~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  275 (281)
T 1mp8_A          234 ERLPMPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  275 (281)
T ss_dssp             CCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            6544443    68899999999999999999999999999998874

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.77  E-value=5.8e-19  Score=111.28  Aligned_cols=110  Identities=23%  Similarity=0.411  Sum_probs=76.6

Q ss_pred             eeecCCCCCCHHHHHHH-HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVES-VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      ++||+|||++....... ...+ ..+.+||.   ..++.++||||||+++|++.+ +..|...   .++...+..+.+..
T Consensus       155 ~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~  234 (278)
T 1byg_A          155 VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD  234 (278)
T ss_dssp             CEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCC
T ss_pred             cEEEeeccccccccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCC
Confidence            58999999986432111 1112 23566765   346789999999999999987 5544321   25566666665544


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .|.    .+++++.+++.+||+.||.+||++.+++..|+.+.+
T Consensus       235 ~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~  273 (278)
T 1byg_A          235 APD----GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  273 (278)
T ss_dssp             CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             Ccc----cCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence            443    688999999999999999999999999999988753

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.77  E-value=1.8e-19  Score=116.18  Aligned_cols=110  Identities=20%  Similarity=0.409  Sum_probs=81.0

Q ss_pred             eeecCCCCCCHHHHHHHH----hc---C-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVESV----RK---G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~---g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||++........    ..   + ..+.+||.   ..++.++||||||+++|++.. +..|...   .++...+.
T Consensus       189 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~  268 (325)
T 3kul_A          189 VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE  268 (325)
T ss_dssp             CEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH
T ss_pred             CEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH
Confidence            689999999852111000    00   1 12556765   346789999999999999887 6666432   36666777


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+.+...|.    .++.++.+||..||..||.+||++.+|+..|+.+.+
T Consensus       269 ~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~  313 (325)
T 3kul_A          269 EGYRLPAPM----GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR  313 (325)
T ss_dssp             TTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCCCCCCCC----CcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            776655554    789999999999999999999999999999998754

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.76  E-value=1.7e-18  Score=110.80  Aligned_cols=110  Identities=20%  Similarity=0.345  Sum_probs=76.0

Q ss_pred             eeecCCCCCCHHHHHHH-HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVES-VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~~~~l~~~~~~   71 (116)
                      .+||+|||++....... ...| ..+.+||.   ..++.++||||||+++|++..+..|...     ..+...+..+.+.
T Consensus       144 ~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~  223 (307)
T 2eva_A          144 VLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP  223 (307)
T ss_dssp             EEEECCCCC------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCC
T ss_pred             EEEEcccccccccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCC
Confidence            37999999986421111 1112 24566765   3468899999999999999888777431     1344445555543


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      ..+.    .++.++.+|+.+||..||.+||++.+++..|+.+.+
T Consensus       224 ~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  263 (307)
T 2eva_A          224 PLIK----NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR  263 (307)
T ss_dssp             CCBT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred             Cccc----ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            3333    688999999999999999999999999999988754

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.76  E-value=8e-19  Score=112.69  Aligned_cols=109  Identities=27%  Similarity=0.423  Sum_probs=75.4

Q ss_pred             eeecCCCCCCHHHHHHH---H---hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES---V---RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~---~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||++.......   .   ..+ ..+.+||.   ..++.++||||||+++|++.. +..|...   .++...+..
T Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~  254 (323)
T 3qup_A          175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG  254 (323)
T ss_dssp             CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT
T ss_pred             CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc
Confidence            68999999986421110   0   011 13556664   346889999999999999888 4444322   245566666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.....|.    .++.++.+|+.+||..||.+||++.++...|+.+.
T Consensus       255 ~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l  297 (323)
T 3qup_A          255 GNRLKQPP----ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL  297 (323)
T ss_dssp             TCCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCC----ccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            65544444    68899999999999999999999999999998875

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.76  E-value=1.6e-18  Score=109.90  Aligned_cols=114  Identities=19%  Similarity=0.339  Sum_probs=75.3

Q ss_pred             eeecCCCCCCHHHHH-------HHHhcCCCCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHH
Q psy12612          2 RVELSDLRILRDEIV-------ESVRKGEKCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-------~~~~~g~~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~   64 (116)
                      ++||+|||++.....       ........+.+||.      ..++.++||||||+++|++..+..|...    ..+...
T Consensus       158 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~  237 (289)
T 3og7_A          158 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM  237 (289)
T ss_dssp             EEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHH
T ss_pred             CEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHH
Confidence            689999999863211       01111223556664      2356789999999999998887776432    345555


Q ss_pred             HhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         65 VRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        65 l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +..+.....+.-....++.++.+|+.+||+.+|.+||++.+|+..|+.+.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          238 VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             hcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            555543222211123688999999999999999999999999999998754

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.76  E-value=1.1e-19  Score=120.79  Aligned_cols=105  Identities=18%  Similarity=0.180  Sum_probs=75.0

Q ss_pred             eeecCCCCCCHHHHHH--H--HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE--S--VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~--~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      +|||+|||+++.-...  .  ...|. .+++||+   ..|+.++||||+|+++||+..+..|+..   .+++..+..+..
T Consensus       285 ~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~  364 (423)
T 4fie_A          285 RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP  364 (423)
T ss_dssp             CEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC
T ss_pred             CEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC
Confidence            6999999998531000  0  00122 4678886   3589999999999999999999888654   255556655442


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...+.  ...+++++.+|+.+||..||++||++.+++.
T Consensus       365 ~~~~~--~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          365 PRLKN--LHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             CCCSC--TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCcc--cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11111  1268899999999999999999999999864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.76  E-value=9.1e-19  Score=111.99  Aligned_cols=109  Identities=23%  Similarity=0.424  Sum_probs=75.8

Q ss_pred             eeecCCCCCCHHHHHH------HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE------SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~------~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      ++||+|||++......      ....+ ..+.+|+.   ..++.++||||||+++|++..+..+.|.    .++...+..
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  264 (313)
T 3brb_A          185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH  264 (313)
T ss_dssp             CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT
T ss_pred             cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHc
Confidence            6899999998642111      01111 12455654   2367899999999999999884443332    245556666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.+...|.    .++.++.+++.+||..+|.+||++.+|+..|+.+.
T Consensus       265 ~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~  307 (313)
T 3brb_A          265 GHRLKQPE----DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL  307 (313)
T ss_dssp             TCCCCCBT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCc----cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            66544443    68899999999999999999999999999998875

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.75  E-value=1.4e-18  Score=112.09  Aligned_cols=109  Identities=24%  Similarity=0.391  Sum_probs=77.1

Q ss_pred             eeecCCCCCCHHHHHH----HHhc--CC-CCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE----SVRK--GE-KCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~--g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||++......    ....  +. .+.+||.   ..++.++||||||+++|++.. +..|...   .++...+..
T Consensus       155 ~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~  234 (327)
T 3lzb_A          155 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK  234 (327)
T ss_dssp             EEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT
T ss_pred             CEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc
Confidence            6899999998632110    1111  11 3556664   346889999999999999888 5555322   256666767


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.+...|.    .++.++.+++.+||..||.+||++.+++..|+.+.
T Consensus       235 ~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  277 (327)
T 3lzb_A          235 GERLPQPP----ICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             TCCCCCCT----TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCc----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            66555554    68899999999999999999999999999998875

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.75  E-value=2.1e-19  Score=115.10  Aligned_cols=101  Identities=14%  Similarity=0.198  Sum_probs=72.6

Q ss_pred             eeecCCCCCCHHHHHHHH----hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESV----RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      +|||+|||+++.......    ..|. .+++||.   ..|+.++||||+|+++||+.++..|+..   .++...+.++..
T Consensus       164 ~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~  243 (304)
T 3ubd_A          164 HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL  243 (304)
T ss_dssp             CEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             CEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCC
Confidence            689999999964221111    1122 3678885   4588999999999999999998888543   356666665542


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCC-----HHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPD-----FTTLK  107 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~-----~~~i~  107 (116)
                       ..|.    .+++++.+|+.+||..||++||+     +++|+
T Consensus       244 -~~p~----~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil  280 (304)
T 3ubd_A          244 -GMPQ----FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIK  280 (304)
T ss_dssp             -CCCT----TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHH
T ss_pred             -CCCC----cCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHH
Confidence             2333    68899999999999999999998     45664

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.75  E-value=1.4e-18  Score=109.07  Aligned_cols=110  Identities=24%  Similarity=0.468  Sum_probs=80.3

Q ss_pred             eeecCCCCCCHHHHHHHH--hcCC----CCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVESV--RKGE----KCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g~----~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||++........  ..+.    .+.+||.   ..++.++||||+|+++|++.. +..|...   .++...+..+
T Consensus       144 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~  223 (269)
T 4hcu_A          144 VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG  223 (269)
T ss_dssp             CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT
T ss_pred             CEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC
Confidence            589999999863111111  1111    2556765   346789999999999999987 5555322   3566667777


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+...|.    .++.++.+++.+||..+|.+||++.+++..|+.+.+
T Consensus       224 ~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          224 FRLYKPR----LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccCCCCC----cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            6555554    678899999999999999999999999999998754

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.74  E-value=4.1e-19  Score=116.68  Aligned_cols=109  Identities=22%  Similarity=0.433  Sum_probs=79.8

Q ss_pred             eeecCCCCCCHHHHH----HHHhc--C-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIV----ESVRK--G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~~~~~--g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||++.....    .....  + ..+.+||.   ..++.++||||||+++|++.. +..|...   .++...+..
T Consensus       229 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~  308 (382)
T 3tt0_A          229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE  308 (382)
T ss_dssp             CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT
T ss_pred             cEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            689999999852100    00000  1 12456664   336789999999999999887 5555322   366677777


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.+...|.    .++.++.+|+.+||+.+|++||++.+|+..|+.+.
T Consensus       309 ~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  351 (382)
T 3tt0_A          309 GHRMDKPS----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  351 (382)
T ss_dssp             TCCCCCCS----SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            77655554    78999999999999999999999999999998875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.74  E-value=1.6e-18  Score=109.99  Aligned_cols=109  Identities=21%  Similarity=0.407  Sum_probs=78.9

Q ss_pred             eeecCCCCCCHHHHH-------HHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV-------ESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-------~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||++.....       .....+ ..+.+||.   ..++.++||||||+++|++.+ +..|...   .++...+.
T Consensus       155 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~  234 (291)
T 1xbb_A          155 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE  234 (291)
T ss_dssp             EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred             cEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            589999999852100       000111 23556664   245778999999999999988 6665432   35666677


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+.+...|.    .++.++.+++.+||+.||.+||++.+++..|+.+.
T Consensus       235 ~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  278 (291)
T 1xbb_A          235 KGERMGCPA----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  278 (291)
T ss_dssp             TTCCCCCCT----TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             cCCCCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            766554444    68899999999999999999999999999998875

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.74  E-value=7.6e-19  Score=112.41  Aligned_cols=100  Identities=14%  Similarity=0.155  Sum_probs=64.2

Q ss_pred             eeecCCCCCCHHHHHH----H------------HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH--
Q psy12612          2 RVELSDLRILRDEIVE----S------------VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT--   59 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~------------~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~--   59 (116)
                      +|||+|||+++.-...    .            ...|. .+++||.   ..|+.++||||+|+++||+..   |....  
T Consensus       156 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~  232 (299)
T 4g31_A          156 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME  232 (299)
T ss_dssp             CEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH
T ss_pred             cEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH
Confidence            6899999998631110    0            00133 4678886   358899999999999999864   43321  


Q ss_pred             --HHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         60 --EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        60 --~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        ..+..+..+.   .|+... ...++..+|+.+||+.||.+|||+.+|+.
T Consensus       233 ~~~~~~~~~~~~---~p~~~~-~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          233 RVRTLTDVRNLK---FPPLFT-QKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHHHHHHTTC---CCHHHH-HHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHhcCC---CCCCCc-ccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence              2223333333   222111 34456788999999999999999999865

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.74  E-value=2e-18  Score=108.29  Aligned_cols=108  Identities=23%  Similarity=0.380  Sum_probs=71.8

Q ss_pred             eeecCCCCCCHHHHHH--HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcC-CCC
Q psy12612          2 RVELSDLRILRDEIVE--SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKG-EKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~-~~~   71 (116)
                      ++||+|||++......  ....| ..+.+||.   ..++.++||||||+++|++..+..|...   ......+... ...
T Consensus       154 ~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  233 (271)
T 3dtc_A          154 ILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL  233 (271)
T ss_dssp             CEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCC
T ss_pred             ceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCC
Confidence            4899999998632111  11112 23556664   3467899999999999999888777543   1333333332 223


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      ..|.    .++.++.+++.+||+.+|.+||++.++++.|+.+
T Consensus       234 ~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          234 PIPS----TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             CCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             CCCc----ccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            3333    6889999999999999999999999999988754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.74  E-value=2e-18  Score=108.00  Aligned_cols=110  Identities=24%  Similarity=0.468  Sum_probs=79.5

Q ss_pred             eeecCCCCCCHHHHHHHHh--cCC----CCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVESVR--KGE----KCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~--~g~----~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||++.........  .+.    .+.+||.   ..++.++||||+|+++|++.. +..|...   .++...+..+
T Consensus       142 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~  221 (267)
T 3t9t_A          142 VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG  221 (267)
T ss_dssp             CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT
T ss_pred             CEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Confidence            5899999998531111111  111    2556664   346778999999999999988 4544322   3566667777


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+...|.    .++.++.+++.+||..+|.+||++.+++..|+.+.+
T Consensus       222 ~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          222 FRLYKPR----LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CcCCCCc----cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            6555554    678899999999999999999999999999998753

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.74  E-value=2.9e-18  Score=119.42  Aligned_cols=109  Identities=27%  Similarity=0.447  Sum_probs=79.2

Q ss_pred             eeecCCCCCCHHH----HHH-HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDE----IVE-SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~----~~~-~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||+++..    ... ....+ ..+.+||.   ..++.++||||||+++||+.. +..|...   .++...+..+
T Consensus       529 ~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~  608 (656)
T 2j0j_A          529 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG  608 (656)
T ss_dssp             EEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHT
T ss_pred             CEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Confidence            6899999998521    111 11112 24667775   346889999999999999876 4444322   3566677777


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+...|.    .++.++.+||.+||..||.+||++.+|+..|+.+.
T Consensus       609 ~~~~~~~----~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          609 ERLPMPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             CCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCc----cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            6654554    78999999999999999999999999999998874

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.74  E-value=1.4e-18  Score=109.69  Aligned_cols=110  Identities=25%  Similarity=0.477  Sum_probs=78.9

Q ss_pred             eeecCCCCCCHHHHHH---HHhc--C-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE---SVRK--G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~--g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||++......   ....  + ..+.+||.   ..++.++||||||+++|++.+ +..|...   .++...+..+
T Consensus       151 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~  230 (281)
T 3cc6_A          151 CVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG  230 (281)
T ss_dssp             EEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHT
T ss_pred             cEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcC
Confidence            5899999987531111   1111  1 12556664   346788999999999999987 6666432   2455566666


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+...|.    .+++.+.+++.+||..+|.+||++.+++..|+.+.+
T Consensus       231 ~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          231 DRLPKPD----LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             CCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCC----CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence            6544444    688999999999999999999999999999988753

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.74  E-value=5.8e-19  Score=114.67  Aligned_cols=110  Identities=22%  Similarity=0.367  Sum_probs=79.7

Q ss_pred             eeecCCCCCCHHHHH------HHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV------ESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~------~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||++.....      .....| ..+.+||.   ..++.++||||||+++|++.+ +..|...    ..+...+.
T Consensus       231 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  310 (359)
T 3vhe_A          231 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK  310 (359)
T ss_dssp             CEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH
T ss_pred             cEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHH
Confidence            589999999852100      000011 13566764   346889999999999999987 6555322    34556666


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+.....|.    .+++++.+++.+||+.||.+||++.+|+..|+.+.+
T Consensus       311 ~~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  355 (359)
T 3vhe_A          311 EGTRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  355 (359)
T ss_dssp             HTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCCCCCCCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            666555554    688999999999999999999999999999998764

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.73  E-value=1e-18  Score=111.07  Aligned_cols=110  Identities=21%  Similarity=0.411  Sum_probs=79.2

Q ss_pred             eeecCCCCCCHHHH-------HHHH-hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHH
Q psy12612          2 RVELSDLRILRDEI-------VESV-RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~-------~~~~-~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l   65 (116)
                      ++||+|||++....       .... ..+ ..+.+||.   ..++.++||||+|+++|++..+..|.+.    .++...+
T Consensus       166 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~  245 (298)
T 3f66_A          166 TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL  245 (298)
T ss_dssp             CEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHH
T ss_pred             CEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH
Confidence            68999999874210       0000 011 12456664   3467899999999999998886666553    2455556


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      ..+.+...|.    .++.++.+++.+||+.+|.+||++.+++..|+.+..
T Consensus       246 ~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  291 (298)
T 3f66_A          246 LQGRRLLQPE----YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  291 (298)
T ss_dssp             HTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcCCCCCCCc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            6666555554    688999999999999999999999999999998753

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.73  E-value=2.7e-18  Score=108.41  Aligned_cols=109  Identities=26%  Similarity=0.445  Sum_probs=79.8

Q ss_pred             eeecCCCCCCHHHHHHHH--hcCC----CCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVESV--RKGE----KCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g~----~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||++........  ..+.    .+.+||.   ..++.++||||+|+++|++.+ +..|...   .+....+..+
T Consensus       158 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~  237 (283)
T 3gen_A          158 VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG  237 (283)
T ss_dssp             CEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT
T ss_pred             CEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc
Confidence            689999999853111111  1111    2556664   346789999999999999987 5555322   3556667777


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+...|.    .++..+.+++.+||+.+|.+||++.+++..|..+.
T Consensus       238 ~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~  279 (283)
T 3gen_A          238 LRLYRPH----LASEKVYTIMYSCWHEKADERPTFKILLSNILDVM  279 (283)
T ss_dssp             CCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCCCCC----cCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence            6655554    67889999999999999999999999999998875

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.73  E-value=4.7e-19  Score=112.43  Aligned_cols=110  Identities=19%  Similarity=0.408  Sum_probs=79.1

Q ss_pred             eeecCCCCCCHHHHHHHHhc--------C-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVESVRK--------G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~--------g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l   65 (116)
                      ++||+|||++..........        + ..+.+|+.   ..++.++||||||+++|++..+..|.+.    .++...+
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~  241 (298)
T 3pls_A          162 TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL  241 (298)
T ss_dssp             CEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHH
T ss_pred             cEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHh
Confidence            68999999985211100000        0 11334443   2357889999999999999887777553    2455666


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      ..+.....|.    .++.++.+++.+||..+|.+||++.+++..|+.+.+
T Consensus       242 ~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~  287 (298)
T 3pls_A          242 AQGRRLPQPE----YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS  287 (298)
T ss_dssp             HTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcCCCCCCCc----cchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            6666554454    688999999999999999999999999999988753

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.72  E-value=4.5e-18  Score=109.47  Aligned_cols=109  Identities=23%  Similarity=0.393  Sum_probs=78.4

Q ss_pred             eeecCCCCCCHHHHHHH--Hhc----C-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES--VRK----G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~----g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||++.......  ...    | ..+.+||.   ..++.++||||||+++|++.+ +..|...   .++...+..
T Consensus       181 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  260 (327)
T 2yfx_A          181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS  260 (327)
T ss_dssp             CEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT
T ss_pred             eEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhc
Confidence            48999999986421111  111    1 13556764   346789999999999999987 4444321   356666766


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.+...+.    .++..+.+++.+||..||.+||++.+|+..|..+.
T Consensus       261 ~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~  303 (327)
T 2yfx_A          261 GGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  303 (327)
T ss_dssp             TCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCC----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence            66544444    68899999999999999999999999999988764

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.72  E-value=2.5e-18  Score=110.82  Aligned_cols=109  Identities=21%  Similarity=0.410  Sum_probs=76.9

Q ss_pred             eeecCCCCCCHHHHHHH--HhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVES--VRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||++.......  ...+     ..+.+||.   ..++.++||||||+++|++.+ +..|...    ..+...+.
T Consensus       202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  281 (333)
T 2i1m_A          202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK  281 (333)
T ss_dssp             EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHH
T ss_pred             eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHh
Confidence            58999999985311100  0001     12556664   346889999999999999987 4444321    24445555


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+.....|.    .++.++.+|+.+||+.||.+||++.+|+..|+.+.
T Consensus       282 ~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  325 (333)
T 2i1m_A          282 DGYQMAQPA----FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA  325 (333)
T ss_dssp             HTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCCCCCCC----CCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence            565544444    67899999999999999999999999999998764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.72  E-value=1.2e-17  Score=106.70  Aligned_cols=110  Identities=17%  Similarity=0.261  Sum_probs=72.7

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~~~~l~~~   68 (116)
                      ++||+|||++......     .......+.+||.   ..++.++||||||+++|++..+..|...     ..+...+..+
T Consensus       174 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  253 (310)
T 2wqm_A          174 VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC  253 (310)
T ss_dssp             CEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTT
T ss_pred             CEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcc
Confidence            5899999998632111     1111123556664   3467899999999999999888877543     1344455544


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ....   ++...++.++.+|+.+||..||.+||++.+|+..|+.+.
T Consensus       254 ~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~  296 (310)
T 2wqm_A          254 DYPP---LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH  296 (310)
T ss_dssp             CSCC---CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCC---CcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            4322   222368899999999999999999999999999998875

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.72  E-value=1.7e-18  Score=109.49  Aligned_cols=108  Identities=16%  Similarity=0.355  Sum_probs=74.2

Q ss_pred             eeecCCCCCCHHHHHHHH-hcC-CCCCCCCcC-----cccCHHHHHHHHHHhcccCCCCCCCCh-----HHHHHHH-hcC
Q psy12612          2 RVELSDLRILRDEIVESV-RKG-EKCLRPNLS-----ELTCEEEVTAIMKRCWNEDPSERPDFT-----TEIVESV-RKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-~~g-~~~~~p~~~-----~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~~~~l-~~~   68 (116)
                      ++||+|||++........ ..| ..+.+||..     .++.++||||+|+++|++..+..|...     ......+ ..+
T Consensus       167 ~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~  246 (287)
T 4f0f_A          167 CAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG  246 (287)
T ss_dssp             CEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSC
T ss_pred             eEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccC
Confidence            489999999862111000 011 235677752     256789999999999999887777432     1222232 334


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .+...|.    .+++++.+++.+||+.||.+||++.+++..|+.+
T Consensus       247 ~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          247 LRPTIPE----DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             CCCCCCc----ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            3333333    6889999999999999999999999999988764

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.71  E-value=1.9e-18  Score=111.57  Aligned_cols=110  Identities=22%  Similarity=0.448  Sum_probs=78.9

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES----VRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||++.......    ...+   ..+.+||.   ..++.++||||||+++|++.. +..|...   .++...+..
T Consensus       195 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  274 (334)
T 2pvf_A          195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE  274 (334)
T ss_dssp             CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH
T ss_pred             CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhc
Confidence            58999999985211000    0001   12456664   346789999999999999887 5555322   356666666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.+...|.    .++.++.+++.+||..+|.+||++.+|+..|+.+.+
T Consensus       275 ~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          275 GHRMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             TCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            66544444    688999999999999999999999999999988753

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.71  E-value=2.1e-18  Score=108.69  Aligned_cols=109  Identities=22%  Similarity=0.411  Sum_probs=78.9

Q ss_pred             eeecCCCCCCHHHHHHH--Hhc---C-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES--VRK---G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~---g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||++.......  ...   + ..+.+||.   ..++.++||||||+++|++.. +..|...   .++...+..+
T Consensus       147 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  226 (279)
T 1qpc_A          147 SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG  226 (279)
T ss_dssp             CEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT
T ss_pred             CEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc
Confidence            68999999985211000  000   1 12456664   346788999999999999988 4444321   3566677777


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+...|.    .++.++.+++.+||..+|++||++.+|...|+.+.
T Consensus       227 ~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  268 (279)
T 1qpc_A          227 YRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (279)
T ss_dssp             CCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCCCcc----cccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            6555554    78899999999999999999999999999998875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.71  E-value=3.1e-18  Score=108.35  Aligned_cols=106  Identities=14%  Similarity=0.271  Sum_probs=74.4

Q ss_pred             eecCCCCCCHHHHH-HHHhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCCCCCC
Q psy12612          3 VELSDLRILRDEIV-ESVRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGEKCLR   73 (116)
Q Consensus         3 vKi~Dfgls~~~~~-~~~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~~~~~   73 (116)
                      +||+|||++..... ........+.+||.    ..++.++||||||+++|++..+..|.+.    ...........  ..
T Consensus       160 ~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~--~~  237 (289)
T 4fvq_A          160 IKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRH--QL  237 (289)
T ss_dssp             EEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC--CC
T ss_pred             eeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccC--CC
Confidence            89999999853211 11222334667774    3367899999999999999887666554    12222222222  12


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      |.    ..+.++.+|+.+||+.||.+||++.+++..|+.+.
T Consensus       238 ~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~  274 (289)
T 4fvq_A          238 PA----PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF  274 (289)
T ss_dssp             CC----CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred             CC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            22    45677899999999999999999999999998775

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=3.6e-18  Score=110.45  Aligned_cols=109  Identities=25%  Similarity=0.371  Sum_probs=78.5

Q ss_pred             eeecCCCCCCHHHHHHH--HhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVES--VRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||++.......  ...+     ..+.+||.   ..++.++||||||+++|++.+ +..|...    ..+...+.
T Consensus       210 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  289 (344)
T 1rjb_A          210 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ  289 (344)
T ss_dssp             EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH
T ss_pred             cEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHh
Confidence            68999999985211000  0011     12566764   346889999999999999987 5555322    24555566


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+.+...|.    .++.++.+|+.+||..||.+||++.+|+..|+.+.
T Consensus       290 ~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  333 (344)
T 1rjb_A          290 NGFKMDQPF----YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL  333 (344)
T ss_dssp             TTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             cCCCCCCCC----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            665554454    68899999999999999999999999999998765

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.71  E-value=3.8e-18  Score=109.81  Aligned_cols=109  Identities=22%  Similarity=0.458  Sum_probs=78.5

Q ss_pred             eeecCCCCCCHHHHH---HHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIV---ESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~---~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++.....   .....+ ..+.+||.   ..++.++||||||+++|++.+ +..|...   .++...+..+.+
T Consensus       180 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~  259 (327)
T 1fvr_A          180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR  259 (327)
T ss_dssp             CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred             eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCC
Confidence            589999999752100   011111 23556664   346789999999999999987 6555332   355666666665


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ...|.    .++.++.+|+.+||..+|.+||++.+++..|+.+.
T Consensus       260 ~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  299 (327)
T 1fvr_A          260 LEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  299 (327)
T ss_dssp             CCCCT----TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            44444    68899999999999999999999999999998764

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=2.9e-18  Score=108.53  Aligned_cols=109  Identities=20%  Similarity=0.385  Sum_probs=79.1

Q ss_pred             eeecCCCCCCHHHHHHHH-----hc--C-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVESV-----RK--G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-----~~--g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||++........     ..  + ..+.+||.   ..++.++||||||+++|++.+ +..|...   .++...+.
T Consensus       148 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~  227 (287)
T 1u59_A          148 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE  227 (287)
T ss_dssp             EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH
T ss_pred             CEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHh
Confidence            589999999852100000     00  0 12455654   346789999999999999987 6655322   35666777


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+.+...|.    .++.++.+++.+||..+|.+||++.+++..|+.+.
T Consensus       228 ~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  271 (287)
T 1u59_A          228 QGKRMECPP----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  271 (287)
T ss_dssp             TTCCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCcCCCCC----CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            776554444    78999999999999999999999999999998764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.71  E-value=2.2e-18  Score=110.07  Aligned_cols=109  Identities=23%  Similarity=0.470  Sum_probs=78.4

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES----VRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||++.......    ...+   ..+.+||.   ..++.++||||+|+++|++.. +..|...   .++...+..
T Consensus       188 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  267 (314)
T 2ivs_A          188 KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT  267 (314)
T ss_dssp             EEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT
T ss_pred             CEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhc
Confidence            68999999985211000    0001   12455664   336789999999999999988 5555322   255666666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.....|.    .++.++.+|+.+||+.||.+||++.+|+..|+.+.
T Consensus       268 ~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          268 GHRMERPD----NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             TCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCcCCCCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            66554554    68899999999999999999999999999998875

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.71  E-value=1.7e-18  Score=108.61  Aligned_cols=110  Identities=26%  Similarity=0.447  Sum_probs=78.9

Q ss_pred             eeecCCCCCCHHHHHHHH--hcCC----CCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVESV--RKGE----KCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g~----~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||++........  ..+.    .+.+||.   ..++.++||||+|+++|++.+ +..|...   .+....+..+
T Consensus       142 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~  221 (268)
T 3sxs_A          142 CVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG  221 (268)
T ss_dssp             CEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT
T ss_pred             CEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC
Confidence            689999998752110000  0111    2456664   246789999999999999987 5555322   3555566666


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .....|.    .++.++.+++.+||+.+|.+||++.+++..|+.+.+
T Consensus       222 ~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          222 HRLYRPH----LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             CCCCCCC----cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            6655554    578899999999999999999999999999988753

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.70  E-value=1.5e-18  Score=111.68  Aligned_cols=112  Identities=14%  Similarity=0.261  Sum_probs=72.1

Q ss_pred             eeecCCCCCCHHHHHHH----H--hcC-CCCCCCCc--------CcccCHHHHHHHHHHhcccCCCCCCCCh--------
Q psy12612          2 RVELSDLRILRDEIVES----V--RKG-EKCLRPNL--------SELTCEEEVTAIMKRCWNEDPSERPDFT--------   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~--~~g-~~~~~p~~--------~~~~~~~dv~s~g~~~we~~~~~~p~~~--------   58 (116)
                      ++||+|||+++......    .  ..| ..+.+||.        ..++.++||||||+++|++.++..|...        
T Consensus       169 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~  248 (322)
T 3soc_A          169 TACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP  248 (322)
T ss_dssp             CEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCT
T ss_pred             eEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccc
Confidence            68999999984210000    0  011 13456664        1245578999999999998887555310        


Q ss_pred             -----------HHHHHHHhcCCCCCCCCCC----ccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         59 -----------TEIVESVRKGEKCLRPSLS----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        59 -----------~~~~~~l~~~~~~~~p~~~----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                                 ..+...+.....  +|.++    ...++.++.+||.+||+.||++|||+.+|+..|+.+.+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          249 FEEEIGQHPSLEDMQEVVVHKKK--RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             THHHHCSSCCHHHHHHHHTTSCC--CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhhhhccCCchhhhhhhhhcccC--CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                       123333322221  22222    12466779999999999999999999999999998764

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.70  E-value=2.5e-18  Score=110.41  Aligned_cols=109  Identities=19%  Similarity=0.348  Sum_probs=77.1

Q ss_pred             eeecCCCCCCHHHHH-------HHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH-----------
Q psy12612          2 RVELSDLRILRDEIV-------ESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT-----------   59 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-------~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~-----------   59 (116)
                      ++||+|||++.....       .....+ ..+.+||.   ..++.++||||||+++|++..+..|....           
T Consensus       172 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~  251 (318)
T 3lxp_A          172 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA  251 (318)
T ss_dssp             CEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSC
T ss_pred             CEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhccc
Confidence            589999999852100       000111 12456664   34677899999999999998887664320           


Q ss_pred             -------HHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         60 -------EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        60 -------~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                             .+...+..+.+...|.    .++.++.+|+.+||+.||.+||++.+++..|+.+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  309 (318)
T 3lxp_A          252 QGQMTVLRLTELLERGERLPRPD----KCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH  309 (318)
T ss_dssp             CHHHHHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHhcccCCCCCc----cccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence                   2334445555544444    78899999999999999999999999999998875

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.69  E-value=6.4e-18  Score=108.36  Aligned_cols=109  Identities=22%  Similarity=0.431  Sum_probs=77.7

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC---CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES----VRKG---EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g---~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||++.......    ...+   ..+.+||.   ..++.++||||||+++|++.. +..|...   .++...+..
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  255 (322)
T 1p4o_A          176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME  255 (322)
T ss_dssp             CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT
T ss_pred             eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHc
Confidence            68999999986321110    0011   12556764   346789999999999999987 4444322   355566666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.....|.    .++.++.+++.+||..+|.+||++.+++..|+.+.
T Consensus       256 ~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~  298 (322)
T 1p4o_A          256 GGLLDKPD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  298 (322)
T ss_dssp             TCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             CCcCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence            65444444    68899999999999999999999999999987653

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.69  E-value=1.4e-17  Score=105.27  Aligned_cols=110  Identities=20%  Similarity=0.437  Sum_probs=75.5

Q ss_pred             eeecCCCCCCHHHH-------HHHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEI-------VESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~-------~~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||++....       ......+ ..+.+||.   ..++.++||||||+++|++.. +..|...   .++...+.
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~  238 (291)
T 1u46_A          159 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID  238 (291)
T ss_dssp             EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH
T ss_pred             CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHH
Confidence            58999999874210       0001111 13556664   346789999999999999988 5555432   24455554


Q ss_pred             cC-CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KG-EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~-~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .. .....+.    .++.++.+++.+||..+|.+||++.+++..|+.+.+
T Consensus       239 ~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          239 KEGERLPRPE----DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             TSCCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             ccCCCCCCCc----CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence            43 3233333    688999999999999999999999999999987653

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.69  E-value=1.4e-18  Score=113.46  Aligned_cols=113  Identities=12%  Similarity=0.040  Sum_probs=72.9

Q ss_pred             eeecCCCCCCHHHHHHHHh-----------cCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHH
Q psy12612          2 RVELSDLRILRDEIVESVR-----------KGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIV   62 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~-----------~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~   62 (116)
                      ++||+|||+++.-......           .|. .+.+||.   ..++.++||||||+++|++..+..|+..    ....
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~  271 (364)
T 3op5_A          192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV  271 (364)
T ss_dssp             CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred             eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence            6899999998521100000           021 3456664   2368899999999999999888777542    1111


Q ss_pred             HHHhcCCCCCC-----CCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         63 ESVRKGEKCLR-----PSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        63 ~~l~~~~~~~~-----p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ...........     +.++...++.++.++|..||..+|.+||++.+|...|+.+.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~  328 (364)
T 3op5_A          272 RDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL  328 (364)
T ss_dssp             HHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence            11111111000     00011257899999999999999999999999999988764

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.69  E-value=1.6e-18  Score=111.62  Aligned_cols=109  Identities=18%  Similarity=0.373  Sum_probs=75.7

Q ss_pred             eeecCCCCCCHHHHHHH-----Hh--cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH-----------
Q psy12612          2 RVELSDLRILRDEIVES-----VR--KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT-----------   59 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~--~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~-----------   59 (116)
                      ++||+|||++.......     ..  .+ ..+.+||.   ..++.++||||||+++|++.++..|....           
T Consensus       183 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~  262 (326)
T 2w1i_A          183 RVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND  262 (326)
T ss_dssp             EEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTT
T ss_pred             cEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccc
Confidence            68999999985210000     00  01 12455664   23678999999999999988876553210           


Q ss_pred             --------HHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         60 --------EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        60 --------~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                              .+...+..+.+...|.    .++.++.+||.+||..||.+||++.+|+..|+.+.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~  321 (326)
T 2w1i_A          263 KQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  321 (326)
T ss_dssp             CCTHHHHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cchhhhHHHHHHHhhcCCCCCCCC----cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                    2233444455444444    78899999999999999999999999999998875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.69  E-value=5.4e-18  Score=107.82  Aligned_cols=110  Identities=23%  Similarity=0.403  Sum_probs=77.5

Q ss_pred             eeecCCCCCCHHHHHHH----H---hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCC-------------
Q psy12612          2 RVELSDLRILRDEIVES----V---RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDF-------------   57 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~---~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~-------------   57 (116)
                      ++||+|||++.......    .   ..|. .+.+||.   ..++.++||||+|+++|++..+..|..             
T Consensus       164 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  243 (302)
T 4e5w_A          164 QVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPT  243 (302)
T ss_dssp             EEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSC
T ss_pred             CEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCc
Confidence            68999999985210000    0   0011 1456664   346778999999999999988765421             


Q ss_pred             -h----HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         58 -T----TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        58 -~----~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                       .    ..+...+..+.+...|.    .++.++.+|+.+||+.||.+||++.++++.|+.+.+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~  302 (302)
T 4e5w_A          244 HGQMTVTRLVNTLKEGKRLPCPP----NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK  302 (302)
T ss_dssp             CGGGHHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             ccccCHHHHHHHHhccCCCCCCC----CCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence             1    13444555565544444    688999999999999999999999999999998764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.69  E-value=2.1e-18  Score=109.47  Aligned_cols=112  Identities=14%  Similarity=0.091  Sum_probs=73.5

Q ss_pred             eeecCCCCCCHHHHHHHH-----------hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------HH
Q psy12612          2 RVELSDLRILRDEIVESV-----------RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------TE   60 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-----------~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------~~   60 (116)
                      ++||+|||++........           ..| ..+.+||.   ..++.++||||||+++|++..+..|...      .+
T Consensus       149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  228 (298)
T 1csn_A          149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ  228 (298)
T ss_dssp             CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred             eEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH
Confidence            499999999852110000           001 13455654   2367899999999999998887777432      12


Q ss_pred             HHHHHhcCCC-CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         61 IVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        61 ~~~~l~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ....+..+.. ...+.+. ..++.++.+|+.+||+.+|.+||++.+|...|+.+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~  282 (298)
T 1csn_A          229 KYERIGEKKQSTPLRELC-AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL  282 (298)
T ss_dssp             HHHHHHHHHHHSCHHHHT-TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHhhccCccHHHHH-hhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence            3333322211 1111111 157889999999999999999999999999998875

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.69  E-value=2.6e-17  Score=103.59  Aligned_cols=105  Identities=15%  Similarity=0.169  Sum_probs=75.4

Q ss_pred             eeecCCCCCCHHHH-----HHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEI-----VESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~-----~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++....     .........+.+||.   ..++.++||||||+++|++..+..|...   .++...+..+..
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~  233 (279)
T 2w5a_A          154 NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF  233 (279)
T ss_dssp             CEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             CEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccc
Confidence            58999999875311     111122234667775   3467889999999999999887766432   355566666664


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI  110 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l  110 (116)
                      ...|.    .++.++.+++.+||..+|.+||++.+|+..+
T Consensus       234 ~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          234 RRIPY----RYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             ccCCc----ccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence            43343    6889999999999999999999999997643

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.69  E-value=1.4e-17  Score=106.54  Aligned_cols=79  Identities=25%  Similarity=0.369  Sum_probs=61.1

Q ss_pred             ccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q psy12612         33 LTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAA  109 (116)
Q Consensus        33 ~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~  109 (116)
                      ++.++||||||+++|++..+..|...   ..+...+..+.....+   ...++.++.+++.+||..+|.+||++.+++..
T Consensus       220 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          220 FSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLS---QIGMGKEISDILLFCWAFEQEERPTFTKLMDM  296 (319)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCC---CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCC---cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            57789999999999999888777432   3455566665543222   22577889999999999999999999999999


Q ss_pred             HHHhh
Q psy12612        110 IRKLN  114 (116)
Q Consensus       110 l~~~~  114 (116)
                      |+.+.
T Consensus       297 l~~l~  301 (319)
T 2y4i_B          297 LEKLP  301 (319)
T ss_dssp             HTTC-
T ss_pred             HHHHH
Confidence            88765

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.69  E-value=6e-18  Score=108.11  Aligned_cols=110  Identities=25%  Similarity=0.408  Sum_probs=78.5

Q ss_pred             eeecCCCCCCHHHHHHH--Hhc----C-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVES--VRK----G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~----g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||++.......  ...    | ..+.+||.   ..++.++||||||+++|++.+ +..|...    ..+...+.
T Consensus       186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~  265 (316)
T 2xir_A          186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK  265 (316)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHH
T ss_pred             CEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhc
Confidence            58999999885211000  000    1 12556664   346789999999999999987 5555321    35556666


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+.+...|.    .+++++.+++.+||+.+|.+||++.+|+..|+.+.+
T Consensus       266 ~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  310 (316)
T 2xir_A          266 EGTRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  310 (316)
T ss_dssp             HTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCccCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            666544444    688899999999999999999999999999988753

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.69  E-value=4.9e-18  Score=107.86  Aligned_cols=110  Identities=17%  Similarity=0.337  Sum_probs=70.9

Q ss_pred             eeecCCCCCCHHHHHHHHh--------cCC-CCCCCCcC---------cccCHHHHHHHHHHhcccCCC----------C
Q psy12612          2 RVELSDLRILRDEIVESVR--------KGE-KCLRPNLS---------ELTCEEEVTAIMKRCWNEDPS----------E   53 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~--------~g~-~~~~p~~~---------~~~~~~dv~s~g~~~we~~~~----------~   53 (116)
                      ++||+|||++.........        .|. .+.+||..         .++.++||||||+++|++..+          .
T Consensus       151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~  230 (301)
T 3q4u_A          151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK  230 (301)
T ss_dssp             CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccc
Confidence            6899999998421000000        111 34566641         234689999999999998776          5


Q ss_pred             CCCCh--------HHHHHHHhcCCCCCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         54 RPDFT--------TEIVESVRKGEKCLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        54 ~p~~~--------~~~~~~l~~~~~~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .|...        ..+...+....  .+|.++.    ..++.++.+|+.+||+.||.+||++.+|+..|+.+
T Consensus       231 ~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          231 PPFYDVVPNDPSFEDMRKVVCVDQ--QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHTTSC--CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccccCCCCcchhhhhHHHhccC--CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            55422        12222222222  1222221    24778899999999999999999999999999876

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.68  E-value=2.7e-17  Score=104.99  Aligned_cols=109  Identities=28%  Similarity=0.437  Sum_probs=76.7

Q ss_pred             eeecCCCCCCHHHHHHH--HhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVES--VRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||++.......  ...+     ..+.+||.   ..++.++||||||+++|++.+ +..|...    ..+...+.
T Consensus       183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  262 (313)
T 1t46_A          183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK  262 (313)
T ss_dssp             EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHH
T ss_pred             CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhc
Confidence            68999999875211000  0001     12556664   346789999999999999987 5544321    24455555


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+.+...+.    .++.++.+|+.+||..||.+||++.+++..|+.+.
T Consensus       263 ~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  306 (313)
T 1t46_A          263 EGFRMLSPE----HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (313)
T ss_dssp             HTCCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCCCCCcc----cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            565544443    68899999999999999999999999999998764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.68  E-value=1.4e-17  Score=106.72  Aligned_cols=104  Identities=18%  Similarity=0.241  Sum_probs=73.1

Q ss_pred             eeecCCCCCCHHHH---HHHHhcCC-CCCCCCc--CcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCCCC
Q psy12612          2 RVELSDLRILRDEI---VESVRKGE-KCLRPNL--SELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPS   75 (116)
Q Consensus         2 ~vKi~Dfgls~~~~---~~~~~~g~-~~~~p~~--~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~p~   75 (116)
                      ++||+|||++....   ......|. .+.+||.  ..++.++||||||+++|++..+..+.+.......+..+...  +.
T Consensus       195 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~--~~  272 (311)
T 3p1a_A          195 RCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLP--PE  272 (311)
T ss_dssp             CEEECCCTTCEECC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCC--HH
T ss_pred             CEEEccceeeeecccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCC--cc
Confidence            58999999974211   11111122 4567775  35788999999999999998887766654555555554421  11


Q ss_pred             CCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         76 LSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        76 ~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ++ ..++.++.+++.+||..||++||++.+++.
T Consensus       273 ~~-~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          273 FT-AGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HH-TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cc-cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            11 257889999999999999999999999875

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.68  E-value=5.5e-18  Score=106.78  Aligned_cols=103  Identities=17%  Similarity=0.210  Sum_probs=71.8

Q ss_pred             eeecCCCCCCHHHHHHHHhcCC-CCCCCCcC----cccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCCCCC
Q psy12612          2 RVELSDLRILRDEIVESVRKGE-KCLRPNLS----ELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPSL   76 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g~-~~~~p~~~----~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~p~~   76 (116)
                      ++||+|||++..........|. .+.+||..    .++.++||||||+++|++..+..+.........+..+.....|. 
T Consensus       172 ~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-  250 (289)
T 1x8b_A          172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQGRLPRIPQ-  250 (289)
T ss_dssp             CEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHTTCCCCCSS-
T ss_pred             EEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHcCCCCCCCc-
Confidence            5899999987531100011121 34566641    23568999999999999988765544334555666665444443 


Q ss_pred             CccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         77 SELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        77 ~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                         .++.++.+++.+||..||.+||++.+++.
T Consensus       251 ---~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          251 ---VLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             ---CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---ccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence               68899999999999999999999999864

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.68  E-value=2.1e-17  Score=106.28  Aligned_cols=109  Identities=12%  Similarity=0.096  Sum_probs=64.7

Q ss_pred             eeecCCCCCCHHHH--------------HH-H-HhcC-CCCCCCCcC------cccCHHHHHHHHHHhcccCCCCCCCCh
Q psy12612          2 RVELSDLRILRDEI--------------VE-S-VRKG-EKCLRPNLS------ELTCEEEVTAIMKRCWNEDPSERPDFT   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~~--------------~~-~-~~~g-~~~~~p~~~------~~~~~~dv~s~g~~~we~~~~~~p~~~   58 (116)
                      ++||+|||++....              .. . ...| ..+.+||..      .++.++||||||+++|++..+..|...
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~  255 (337)
T 3ll6_A          176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED  255 (337)
T ss_dssp             CEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            68999999874200              00 0 0112 235667742      256799999999999999888877543


Q ss_pred             HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         59 TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        59 ~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ......+........+.    .++..+.+|+.+||+.||.+||++.+++..|+.+.
T Consensus       256 ~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~  307 (337)
T 3ll6_A          256 GAKLRIVNGKYSIPPHD----TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA  307 (337)
T ss_dssp             ----------CCCCTTC----CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhHHHhhcCcccCCccc----ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            22222222222222222    56677899999999999999999999999998764

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.67  E-value=4.8e-18  Score=107.68  Aligned_cols=112  Identities=13%  Similarity=0.126  Sum_probs=72.1

Q ss_pred             eeecCCCCCCHHHHHHHH-----------hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------HH
Q psy12612          2 RVELSDLRILRDEIVESV-----------RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------TE   60 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-----------~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------~~   60 (116)
                      ++||+|||++........           ..| ..+.+||.   ..++.++||||||+++|++..+..|...      .+
T Consensus       146 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  225 (296)
T 3uzp_A          146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  225 (296)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred             eEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhh
Confidence            589999999852100000           011 12455654   2367899999999999998887766431      01


Q ss_pred             HHHHHhcCCC-CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         61 IVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        61 ~~~~l~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ....+..+.. ...+.+. ..++.++.+++.+||+.||.+||++.+|...|+.+.
T Consensus       226 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  279 (296)
T 3uzp_A          226 KYERISEKKMSTPIEVLC-KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             HHHHHHHHHHHSCHHHHT-TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             hhhhhcccccCCchHHHH-hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence            2222222111 1110000 157889999999999999999999999999998875

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.67  E-value=6.6e-18  Score=106.76  Aligned_cols=109  Identities=23%  Similarity=0.420  Sum_probs=77.5

Q ss_pred             eeecCCCCCCHHHHHHHH-----hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVESV-----RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-----~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      ++||+|||++........     ..+ ..+.+||.   ..++.++||||+|+++|++..+..+.|.    .++...+...
T Consensus       149 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~  228 (288)
T 3kfa_A          149 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD  228 (288)
T ss_dssp             CEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT
T ss_pred             CEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcc
Confidence            589999998853110000     000 12456664   3467899999999999999883333332    2556666666


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+...|.    .++.++.+|+.+||..||.+||++.+++..|+.+.
T Consensus       229 ~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~  270 (288)
T 3kfa_A          229 YRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  270 (288)
T ss_dssp             CCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCC----CCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence            6555554    78899999999999999999999999999988764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.67  E-value=2.9e-17  Score=105.77  Aligned_cols=114  Identities=16%  Similarity=0.262  Sum_probs=70.6

Q ss_pred             eeecCCCCCCHHH----HHHHHh----cCC-CCCCCCcC---cccC------HHHHHHHHHHhcccCCC----------C
Q psy12612          2 RVELSDLRILRDE----IVESVR----KGE-KCLRPNLS---ELTC------EEEVTAIMKRCWNEDPS----------E   53 (116)
Q Consensus         2 ~vKi~Dfgls~~~----~~~~~~----~g~-~~~~p~~~---~~~~------~~dv~s~g~~~we~~~~----------~   53 (116)
                      ++||+|||++...    ......    .|. .+.+||..   .+..      ++||||||+++|++..+          .
T Consensus       180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~  259 (337)
T 3mdy_A          180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ  259 (337)
T ss_dssp             CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccc
Confidence            6899999998421    111110    121 35566641   1122      48999999999998766          4


Q ss_pred             CCCCh--------HHHHHHHhc-CCCCCCCC-CCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         54 RPDFT--------TEIVESVRK-GEKCLRPS-LSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        54 ~p~~~--------~~~~~~l~~-~~~~~~p~-~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .|...        ..+...+.. ..+...|. .....++.++.+|+.+||+.||.+||++.+|+..|+.+.+
T Consensus       260 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  331 (337)
T 3mdy_A          260 LPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE  331 (337)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence            44321        122332322 22222221 1123688899999999999999999999999999998753

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.67  E-value=3.4e-17  Score=105.56  Aligned_cols=114  Identities=12%  Similarity=0.177  Sum_probs=71.5

Q ss_pred             eeecCCCCCCHHH---------H-HHHH--hcCC-CCCCCCcC----------cccCHHHHHHHHHHhcccCCCCCCCCh
Q psy12612          2 RVELSDLRILRDE---------I-VESV--RKGE-KCLRPNLS----------ELTCEEEVTAIMKRCWNEDPSERPDFT   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~---------~-~~~~--~~g~-~~~~p~~~----------~~~~~~dv~s~g~~~we~~~~~~p~~~   58 (116)
                      ++||+|||++..-         . ....  ..|. .+.+||..          .++.++||||||+++|++..+..|.+.
T Consensus       158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  237 (336)
T 3g2f_A          158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP  237 (336)
T ss_dssp             CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred             cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence            6899999998420         0 0000  0122 35567641          244679999999999998766554321


Q ss_pred             ---------------------HHHHHHHhc-CCCCCCCCC-C-ccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         59 ---------------------TEIVESVRK-GEKCLRPSL-S-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        59 ---------------------~~~~~~l~~-~~~~~~p~~-~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                                           ..+...+.. ..+...|.. . ...++.++.+||.+||..||.+|||+.+++..|+.+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             TSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence                                 122222222 222222211 1 1236778999999999999999999999999999876


Q ss_pred             c
Q psy12612        115 K  115 (116)
Q Consensus       115 ~  115 (116)
                      .
T Consensus       318 ~  318 (336)
T 3g2f_A          318 M  318 (336)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.67  E-value=1.7e-17  Score=103.87  Aligned_cols=76  Identities=25%  Similarity=0.428  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHhcccCCCCCCCCh---HHH-HHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         36 EEEVTAIMKRCWNEDPSERPDFT---TEI-VESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        36 ~~dv~s~g~~~we~~~~~~p~~~---~~~-~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      ++||||||+++|++..+..|...   .+. ......+.+...|.    .++.++.+++.+||+.||.+||++.+++..|+
T Consensus       191 ~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~  266 (271)
T 3kmu_A          191 SADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPP----GISPHVSKLMKICMNEDPAKRPKFDMIVPILE  266 (271)
T ss_dssp             HHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            79999999999999888777532   223 23334454444443    68899999999999999999999999999999


Q ss_pred             Hhhc
Q psy12612        112 KLNK  115 (116)
Q Consensus       112 ~~~~  115 (116)
                      .+.+
T Consensus       267 ~l~~  270 (271)
T 3kmu_A          267 KMQD  270 (271)
T ss_dssp             HHCC
T ss_pred             Hhhc
Confidence            8753

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.66  E-value=5.4e-18  Score=107.40  Aligned_cols=112  Identities=13%  Similarity=0.116  Sum_probs=71.2

Q ss_pred             eeecCCCCCCHHHHHHHH-----------hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------HH
Q psy12612          2 RVELSDLRILRDEIVESV-----------RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------TE   60 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-----------~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------~~   60 (116)
                      ++||+|||++........           ..| ..+.+||.   ..++.++||||||+++|++..+..|...      .+
T Consensus       146 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  225 (296)
T 4hgt_A          146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  225 (296)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred             eEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh
Confidence            589999999852100000           001 12345553   2357799999999999998877766432      01


Q ss_pred             HHHHHhcCCC-CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         61 IVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        61 ~~~~l~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ....+..... ...+.+ ...++.++.+|+.+||+.+|++||++.+|++.|+.+.
T Consensus       226 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~  279 (296)
T 4hgt_A          226 KYERISEKKMSTPIEVL-CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             HHHHHHHHHHHSCHHHH-TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             hhhhhhcccccchhhhh-hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence            2222211111 111000 0156889999999999999999999999999998875

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.66  E-value=1.5e-16  Score=103.10  Aligned_cols=103  Identities=17%  Similarity=0.267  Sum_probs=67.8

Q ss_pred             eeecCCCCCCHHH---HH---HHHhcCC-CCCCCCc--------------CcccCHHHHHHHHHHhcccCCCCCCCCh--
Q psy12612          2 RVELSDLRILRDE---IV---ESVRKGE-KCLRPNL--------------SELTCEEEVTAIMKRCWNEDPSERPDFT--   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~---~~---~~~~~g~-~~~~p~~--------------~~~~~~~dv~s~g~~~we~~~~~~p~~~--   58 (116)
                      ++||+|||+++..   ..   .....|. .+.+||.              ..++.++||||||+++|++..+..|...  
T Consensus       145 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  224 (343)
T 3dbq_A          145 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  224 (343)
T ss_dssp             EEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             cEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh
Confidence            5899999998521   11   1111232 4567764              2357789999999999999888777532  


Q ss_pred             ---HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         59 ---TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        59 ---~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                         ..+...+........|.    .++.++.+|+.+||..||.+||++.+++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          225 NQISKLHAIIDPNHEIEFPD----IPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             SHHHHHHHHHCTTSCCCCCC----CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hHHHHHHHHhcCCcccCCcc----cCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence               12222222222233333    56788999999999999999999999865

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.66  E-value=2.7e-18  Score=110.24  Aligned_cols=100  Identities=12%  Similarity=0.085  Sum_probs=72.7

Q ss_pred             eeecCCCCCCHHHHH--H--HH--hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIV--E--SV--RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~--~~--~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~   68 (116)
                      +|||+|||+++.-..  .  ..  ..|. .+++||+   ..|+.++||||+|+++|++..+..|+..   .++...+.++
T Consensus       170 ~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~  249 (311)
T 4aw0_A          170 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL  249 (311)
T ss_dssp             CEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             CEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence            689999999862100  0  00  0132 3677886   3578899999999999999998887543   3566666655


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL  106 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i  106 (116)
                      .. .-|.    .+++++.+|+.+|+..||++|||..++
T Consensus       250 ~~-~~p~----~~s~~~~dli~~lL~~dp~~R~t~~e~  282 (311)
T 4aw0_A          250 EY-DFPE----KFFPKARDLVEKLLVLDATKRLGCEEM  282 (311)
T ss_dssp             CC-CCCT----TCCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred             CC-CCCc----ccCHHHHHHHHHHccCCHhHCcChHHH
Confidence            42 2232    678899999999999999999999876

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.65  E-value=2.4e-16  Score=100.86  Aligned_cols=110  Identities=14%  Similarity=0.163  Sum_probs=75.0

Q ss_pred             eeecCCCCCCHH---------HHH--H--HHhcC-CCCCCCCcC------cccCHHHHHHHHHHhcccCCCCCCCCh---
Q psy12612          2 RVELSDLRILRD---------EIV--E--SVRKG-EKCLRPNLS------ELTCEEEVTAIMKRCWNEDPSERPDFT---   58 (116)
Q Consensus         2 ~vKi~Dfgls~~---------~~~--~--~~~~g-~~~~~p~~~------~~~~~~dv~s~g~~~we~~~~~~p~~~---   58 (116)
                      ++||+|||++..         ...  .  ....| ..+.+||..      .++.++||||||+++|++..+..|...   
T Consensus       172 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  251 (317)
T 2buj_A          172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ  251 (317)
T ss_dssp             CEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH
T ss_pred             CEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc
Confidence            589999997631         110  0  11122 246678752      257899999999999999888776421   


Q ss_pred             --HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         59 --TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        59 --~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                        ..+...+........+.    .++.++.+|+.+||..||.+||++.+++..|+.+.+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          252 KGDSVALAVQNQLSIPQSP----RHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             TTSCHHHHHHCC--CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             ccchhhHHhhccCCCCccc----cCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence              02223333333222222    578899999999999999999999999999988754

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.65  E-value=1.4e-18  Score=111.02  Aligned_cols=82  Identities=18%  Similarity=0.290  Sum_probs=59.0

Q ss_pred             CCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---------HHHHHHhcCCCCCCCCCCccchHHHHHHHHHHh
Q psy12612         25 CLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---------EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRC   92 (116)
Q Consensus        25 ~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---------~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~C   92 (116)
                      +.+||.   ..++.++||||||+++|++..+..|....         .....+..    ..|.    .+++++.+++.+|
T Consensus       188 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~l~~li~~~  259 (310)
T 3s95_A          188 WMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR----YCPP----NCPPSFFPITVRC  259 (310)
T ss_dssp             GCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH----TCCT----TCCTTHHHHHHHH
T ss_pred             eeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc----cCCC----CCCHHHHHHHHHH
Confidence            456664   34688999999999999987665543210         11111111    1122    5788899999999


Q ss_pred             ccCCCCCCCCHHHHHHHHHHhh
Q psy12612         93 WNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        93 w~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      |+.||++||++.++...|+.+.
T Consensus       260 l~~dP~~Rps~~~l~~~L~~l~  281 (310)
T 3s95_A          260 CDLDPEKRPSFVKLEHWLETLR  281 (310)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999998875

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.65  E-value=1.8e-17  Score=107.90  Aligned_cols=104  Identities=17%  Similarity=0.249  Sum_probs=70.4

Q ss_pred             eeecCCCCCCHHHHHHHHhcCC-CCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESVRKGE-KCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g~-~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||++..........|. .+.+||.      ..++.++||||||+++|++..+..|...   ......+..+.. 
T Consensus       192 ~~kL~DfG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~-  270 (348)
T 1u5q_A          192 LVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-  270 (348)
T ss_dssp             EEEECCCTTCBSSSSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-
T ss_pred             CEEEeeccCceecCCCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-
Confidence            6899999998521000000111 3556663      2468899999999999999988877543   133333433332 


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        |.+....++..+.+++.+||..+|.+||++.+++.
T Consensus       271 --~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          271 --PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             --CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             --CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence              22222268889999999999999999999999864

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.65  E-value=4.7e-18  Score=110.27  Aligned_cols=112  Identities=13%  Similarity=0.047  Sum_probs=72.1

Q ss_pred             eeecCCCCCCHHHHHH-----------HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHH
Q psy12612          2 RVELSDLRILRDEIVE-----------SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIV   62 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----------~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~   62 (116)
                      ++||+|||+++.-...           ....| ..+.+||.   ..++.++||||||+++|++..+..|...    ....
T Consensus       191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~  270 (345)
T 2v62_A          191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV  270 (345)
T ss_dssp             SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred             cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence            6899999998521000           00012 23556664   2368899999999999999888777522    1111


Q ss_pred             HHHhcCCCCCCCCC-----CccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         63 ESVRKGEKCLRPSL-----SELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        63 ~~l~~~~~~~~p~~-----~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      ...........|..     +...++.++.+++.+||..||++||++.+|+..|+.+
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          271 QTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             HHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred             HHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence            11111111111110     0115778999999999999999999999999988764

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.64  E-value=5.6e-17  Score=105.41  Aligned_cols=113  Identities=12%  Similarity=0.096  Sum_probs=72.8

Q ss_pred             eeecCCCCCCHHHHHHH-----------HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHH
Q psy12612          2 RVELSDLRILRDEIVES-----------VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEI   61 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----------~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~   61 (116)
                      ++||+|||++..-....           ...|. .+.+||.   ..++.++||||||+++|++..+..|...     ..+
T Consensus       199 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  278 (352)
T 2jii_A          199 QVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDI  278 (352)
T ss_dssp             EEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred             eEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHH
Confidence            69999999985211000           00111 3455654   2467899999999999998887777432     122


Q ss_pred             HHHHh---cCCC-CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         62 VESVR---KGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        62 ~~~l~---~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .....   .... ...+......++.++.+|+.+||..||.+||++.+|+..|+.+.
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  335 (352)
T 2jii_A          279 MKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL  335 (352)
T ss_dssp             HHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence            22221   1111 11111111246899999999999999999999999999998775

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.64  E-value=1.9e-16  Score=103.06  Aligned_cols=106  Identities=8%  Similarity=0.014  Sum_probs=68.3

Q ss_pred             eeecCCCCCCHHHHHHH---HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES---VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~~   70 (116)
                      ++||+|||+++......   ...| ..+.+||.   ..++.++||||||+++|++..+..|...    ..+...+..+..
T Consensus       189 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~  268 (349)
T 2w4o_A          189 PLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY  268 (349)
T ss_dssp             CEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC
T ss_pred             CEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC
Confidence            58999999986421111   1112 23566765   2468899999999999999888877543    124445554433


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...+.. ...++.++.+|+.+||..||++||++.+++.
T Consensus       269 ~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          269 YFISPW-WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             CCCTTT-TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ccCCch-hhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            211111 1257889999999999999999999999865

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.64  E-value=3.3e-16  Score=99.81  Aligned_cols=106  Identities=12%  Similarity=0.164  Sum_probs=73.8

Q ss_pred             eeecCCCCCCHHH---HHHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDE---IVESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~---~~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      ++||+|||++...   ..........+.+||.   ..++.++||||+|+++|++..+..|...   .++...+..+....
T Consensus       147 ~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~  226 (304)
T 2jam_A          147 KIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEF  226 (304)
T ss_dssp             CEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCC
T ss_pred             CEEEccCCcceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            5899999987521   1111112234667875   2467899999999999999888777533   34555666554322


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..... ..++.++.+++.+||..||.+||++.+++.
T Consensus       227 ~~~~~-~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          227 ESPFW-DDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             CTTTT-TTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             Ccccc-ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            21111 257889999999999999999999999865

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.64  E-value=4.2e-17  Score=102.74  Aligned_cols=107  Identities=13%  Similarity=0.247  Sum_probs=74.7

Q ss_pred             eeecCCCCCCHHHHHHH---HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-HHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIVES---VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-TEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-~~~~~~l~~~~~~~~   73 (116)
                      ++||+|||++.......   ...| ..+.+||.   ..++.++||||||+++|++..+..|.+. ......+..+.   .
T Consensus       160 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~---~  236 (284)
T 2a19_B          160 QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGI---I  236 (284)
T ss_dssp             EEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTC---C
T ss_pred             CEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhccc---c
Confidence            68999999874210000   0011 12445654   2368899999999999999988777543 13333444332   2


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.    .++.++.+++.+||..||.+||++.+++..|..+.+
T Consensus       237 ~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          237 SD----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             CT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             cc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            22    577889999999999999999999999999988754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.64  E-value=5.7e-18  Score=109.18  Aligned_cols=112  Identities=13%  Similarity=0.140  Sum_probs=72.2

Q ss_pred             eeecCCCCCCHHHHHHHH-----------hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------HH
Q psy12612          2 RVELSDLRILRDEIVESV-----------RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------TE   60 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-----------~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------~~   60 (116)
                      ++||+|||++..-.....           ..| ..+.+||.   ..++.++||||||+++|++..+..|...      .+
T Consensus       148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~  227 (330)
T 2izr_A          148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKE  227 (330)
T ss_dssp             SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHH
T ss_pred             eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHH
Confidence            399999999853100000           011 23456664   2367899999999999999887777532      12


Q ss_pred             HHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         61 IVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        61 ~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ....+..+.....+......+| ++.+++..||+.+|.+||++.+|...|+.+.
T Consensus       228 ~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~  280 (330)
T 2izr_A          228 RYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF  280 (330)
T ss_dssp             HHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence            2333322221111110001366 9999999999999999999999999988764

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.64  E-value=2.3e-17  Score=106.21  Aligned_cols=109  Identities=20%  Similarity=0.394  Sum_probs=76.2

Q ss_pred             eeecCCCCCCHHHHHHH----Hh---cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------------
Q psy12612          2 RVELSDLRILRDEIVES----VR---KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------------   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~---~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------------   58 (116)
                      ++||+|||++.......    ..   .| ..+.+||.   ..++.++||||||+++|++..+..|...            
T Consensus       165 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~  244 (327)
T 3lxl_A          165 HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE  244 (327)
T ss_dssp             EEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC--
T ss_pred             CEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccc
Confidence            68999999985210000    00   01 01455664   3367899999999999999888766432            


Q ss_pred             ------HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         59 ------TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        59 ------~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                            ..+...+..+.+...|.    .++.++.+|+.+||+.||.+||++.+++..|+.+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  302 (327)
T 3lxl_A          245 RDVPALSRLLELLEEGQRLPAPP----ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW  302 (327)
T ss_dssp             --CCHHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred             cccccHHHHHHHhhcccCCCCCC----cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                  12334445555444444    68899999999999999999999999999998764

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.63  E-value=1.7e-17  Score=112.17  Aligned_cols=112  Identities=15%  Similarity=0.133  Sum_probs=72.6

Q ss_pred             eeecCCCCCCHHHHHHH-----------HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------HH
Q psy12612          2 RVELSDLRILRDEIVES-----------VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------TE   60 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----------~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------~~   60 (116)
                      ++||+|||++.......           ...| ..+.+||.   ..++.++||||||+++|++..+..|+..      .+
T Consensus       144 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~  223 (483)
T 3sv0_A          144 QVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ  223 (483)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH
T ss_pred             eEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHH
Confidence            58999999985211000           0011 13455554   2467899999999999999888777432      12


Q ss_pred             HHHHHhcCCC-CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         61 IVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        61 ~~~~l~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ....+..... .....+. ..++.++.+||..||..+|++||++.+|...|+.+.
T Consensus       224 ~~~~i~~~~~~~~~~~l~-~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~  277 (483)
T 3sv0_A          224 KYEKISEKKVATSIEALC-RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF  277 (483)
T ss_dssp             HHHHHHHHHHHSCHHHHH-TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHhhccccccHHHHh-cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            2222221110 0000000 157889999999999999999999999999998874

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.63  E-value=3.3e-16  Score=103.62  Aligned_cols=105  Identities=12%  Similarity=0.187  Sum_probs=70.9

Q ss_pred             eeecCCCCCCHHHH----HHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH-------HHHHHHhc
Q psy12612          2 RVELSDLRILRDEI----VESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT-------EIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~----~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~-------~~~~~l~~   67 (116)
                      ++||+|||+++...    .........+.+||+   ..++.++||||||+++|++..+..|+...       .+...+..
T Consensus       202 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~  281 (400)
T 1nxk_A          202 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM  281 (400)
T ss_dssp             CEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH
T ss_pred             cEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc
Confidence            58999999985211    111111224667876   34788999999999999998877775321       13344444


Q ss_pred             CCC-CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +.. ...+.  ...++.++.+||.+||..||.+||++.+|+.
T Consensus       282 ~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          282 GQYEFPNPE--WSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             TCCCCCTTT--TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CcccCCCcc--cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            432 22221  1257889999999999999999999999975

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.63  E-value=1.6e-16  Score=104.76  Aligned_cols=103  Identities=17%  Similarity=0.248  Sum_probs=68.5

Q ss_pred             eeecCCCCCCHHHH---HHHHh---cCC-CCCCCCcC--------------cccCHHHHHHHHHHhcccCCCCCCCCh--
Q psy12612          2 RVELSDLRILRDEI---VESVR---KGE-KCLRPNLS--------------ELTCEEEVTAIMKRCWNEDPSERPDFT--   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~~---~~~~~---~g~-~~~~p~~~--------------~~~~~~dv~s~g~~~we~~~~~~p~~~--   58 (116)
                      ++||+|||+++.-.   .....   .|. .+.+||+.              .++.++||||||+++|++..+..|...  
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~  271 (390)
T 2zmd_A          192 MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  271 (390)
T ss_dssp             CEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             eEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh
Confidence            58999999985211   11111   122 35677741              367789999999999999888777532  


Q ss_pred             --HHHHHHHhcC-CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         59 --TEIVESVRKG-EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        59 --~~~~~~l~~~-~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        ...+..+..+ .....|.    ..+.++.+|+.+||..||.+||++.+++.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          272 NQISKLHAIIDPNHEIEFPD----IPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             CHHHHHHHHHCTTSCCCCCC----CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHhCccccCCCCc----cchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence              1223333332 2233333    46788999999999999999999999864

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.63  E-value=3.5e-16  Score=100.06  Aligned_cols=103  Identities=16%  Similarity=0.233  Sum_probs=67.5

Q ss_pred             eeecCCCCCCHHHHHH------HHhcC-CCCCCCCcC--------------cccCHHHHHHHHHHhcccCCCCCCCCh--
Q psy12612          2 RVELSDLRILRDEIVE------SVRKG-EKCLRPNLS--------------ELTCEEEVTAIMKRCWNEDPSERPDFT--   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~------~~~~g-~~~~~p~~~--------------~~~~~~dv~s~g~~~we~~~~~~p~~~--   58 (116)
                      ++||+|||++......      ....| ..+.+||..              .++.++||||||+++|++..+..|...  
T Consensus       164 ~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  243 (313)
T 3cek_A          164 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  243 (313)
T ss_dssp             EEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             eEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence            5899999998521110      11112 235566641              356789999999999999888777432  


Q ss_pred             --HHHHHHHh-cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         59 --TEIVESVR-KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        59 --~~~~~~l~-~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        ......+. .......|.    .++.++.+++.+||..||.+||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          244 NQISKLHAIIDPNHEIEFPD----IPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             SHHHHHHHHHCTTSCCCCCC----CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHhcccccCCcc----cchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence              11222222 222233333    56788999999999999999999999875

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.62  E-value=2.2e-17  Score=113.49  Aligned_cols=106  Identities=12%  Similarity=0.096  Sum_probs=74.6

Q ss_pred             eeecCCCCCCHHHHHHH---HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVES---VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||+++.-....   ...|. .+++||+   ..|+.++||||+|+++|++..+..|+..   .+++..+..+...
T Consensus       295 ~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~  374 (573)
T 3uto_A          295 ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN  374 (573)
T ss_dssp             CEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC
T ss_pred             CEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCC
Confidence            58999999986310000   01132 3567875   3478899999999999999888877543   3566666665432


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.. ...++.++.+||.+||..||.+||++.+++.
T Consensus       375 ~~~~~-~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          375 MDDSA-FSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             CCSGG-GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCccc-ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            21111 1257889999999999999999999999875

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.62  E-value=6.4e-17  Score=103.08  Aligned_cols=103  Identities=15%  Similarity=0.170  Sum_probs=68.7

Q ss_pred             eeecCCCCCCHHHHHHHH----hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHh-cCC
Q psy12612          2 RVELSDLRILRDEIVESV----RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVR-KGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~-~~~   69 (116)
                      ++||+|||++........    ..|. .+.+||.   ..++.++||||+|+++|++..+..|...   ......+. .+.
T Consensus       154 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  233 (297)
T 3fxz_A          154 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT  233 (297)
T ss_dssp             CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS
T ss_pred             CEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            689999998742100000    0111 2456664   3468899999999999999888877543   12222222 222


Q ss_pred             C-CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 K-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      . ...|    ..++..+.+++.+||..||.+||++.+++.
T Consensus       234 ~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          234 PELQNP----EKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             CCCSCG----GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCCCc----cccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            1 2222    268889999999999999999999999864

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.62  E-value=3.2e-16  Score=99.07  Aligned_cols=103  Identities=14%  Similarity=0.219  Sum_probs=64.3

Q ss_pred             eeecCCCCCCHHHHHH---HHhcCC-CCCCCCc-------CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVE---SVRKGE-KCLRPNL-------SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~g~-~~~~p~~-------~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~~~~l   65 (116)
                      ++||+|||++......   ....|. .+.+||.       ..++.++||||+|+++|++..+..|...     ..+...+
T Consensus       148 ~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  227 (290)
T 3fme_A          148 QVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV  227 (290)
T ss_dssp             CEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHH
T ss_pred             CEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHh
Confidence            6899999998632111   111222 3556664       1357789999999999999887776431     1233333


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .......    +...++.++.+++.+||..||.+||++.+++.
T Consensus       228 ~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          228 EEPSPQL----PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HSCCCCC----CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ccCCCCc----ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            3332222    22268899999999999999999999999865

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.61  E-value=3.7e-16  Score=103.85  Aligned_cols=106  Identities=10%  Similarity=0.114  Sum_probs=70.8

Q ss_pred             eeecCCCCCCHH----HHHHHHhcCCCCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRD----EIVESVRKGEKCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~----~~~~~~~~g~~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      ++||+|||+++.    ...........+.+||.      ..++.++||||||+++|++..+..|...    ..+...+..
T Consensus       280 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~  359 (419)
T 3i6u_A          280 LIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS  359 (419)
T ss_dssp             CEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHT
T ss_pred             eEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhc
Confidence            589999999852    11111222235678885      2356789999999999998887766422    134455555


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +.....|... ..++.++.+|+.+||..||.+||++.+++.
T Consensus       360 ~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          360 GKYNFIPEVW-AEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             TCCCCCHHHH-TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCCchhh-cccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            5433222111 147788999999999999999999999875

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.61  E-value=5.9e-16  Score=97.98  Aligned_cols=105  Identities=11%  Similarity=0.111  Sum_probs=68.2

Q ss_pred             eeecCCCCCCHHHHH---HHHhcC-CCCCCCCc--CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIV---ESVRKG-EKCLRPNL--SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~---~~~~~g-~~~~~p~~--~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      ++||+|||++.....   .....| ..+.+||.  ..++.++||||||+++|++..+..|...   .++...........
T Consensus       165 ~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~  244 (285)
T 3is5_A          165 PIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNY  244 (285)
T ss_dssp             CEEECCCCCCCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             CEEEEeeecceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCccc
Confidence            589999999852111   111112 23556664  3467899999999999999888777532   23333333332211


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...  ....++++.+|+.+||..||.+||++.+++.
T Consensus       245 ~~~--~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          245 AVE--CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             CC----CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             ccc--cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            111  1136788999999999999999999999874

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.61  E-value=1.2e-15  Score=99.71  Aligned_cols=104  Identities=13%  Similarity=0.229  Sum_probs=65.4

Q ss_pred             eeecCCCCCCHHHHHHH---HhcC-CCCCCCCc---CcccCH-HHHHHHHHHhcccCCCCCCCCh-------HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVES---VRKG-EKCLRPNL---SELTCE-EEVTAIMKRCWNEDPSERPDFT-------TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g-~~~~~p~~---~~~~~~-~dv~s~g~~~we~~~~~~p~~~-------~~~~~~l~   66 (116)
                      ++||+|||+++......   ...| ..+.+||.   ..++.+ +||||+|+++|++..+..|...       ..+...+.
T Consensus       156 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~  235 (361)
T 3uc3_A          156 RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL  235 (361)
T ss_dssp             CEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHH
T ss_pred             eEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh
Confidence            48999999987422211   1112 24567774   233444 8999999999999888777542       13333333


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .........   ..++.++.+|+.+||..||.+|||+.+++.
T Consensus       236 ~~~~~~~~~---~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          236 SVKYSIPDD---IRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             TTCCCCCTT---SCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             cCCCCCCCc---CCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence            322211111   157889999999999999999999999865

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.61  E-value=1.1e-15  Score=98.75  Aligned_cols=105  Identities=10%  Similarity=0.039  Sum_probs=70.0

Q ss_pred             eeecCCCCCCHHH-------HH-HHHhcCC-CCCCCCc-----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHH
Q psy12612          2 RVELSDLRILRDE-------IV-ESVRKGE-KCLRPNL-----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~-------~~-~~~~~g~-~~~~p~~-----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~   64 (116)
                      ++||+|||++..-       .. .....|. .+.+||.     ..++.++||||||+++|++..+..|...   .+....
T Consensus       208 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  287 (345)
T 3hko_A          208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQ  287 (345)
T ss_dssp             CEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             eEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHH
Confidence            6899999998521       00 0111122 3556764     3467899999999999999888777532   233344


Q ss_pred             HhcCCC-CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         65 VRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        65 l~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +..+.. ...|.  ...++.++.+|+.+||..+|.+||++.+++.
T Consensus       288 ~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          288 VLNKKLCFENPN--YNVLSPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             HHHCCCCTTSGG--GGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             HHhcccccCCcc--cccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            433332 22221  1247789999999999999999999999875

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.61  E-value=3.8e-16  Score=100.66  Aligned_cols=106  Identities=11%  Similarity=0.118  Sum_probs=69.9

Q ss_pred             eeecCCCCCCHHHH----HHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEI----VESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~----~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||++....    .........+.+||.   ..++.++||||||+++|++..+..|...   .+....+......
T Consensus       172 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~  251 (327)
T 3lm5_A          172 DIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVD  251 (327)
T ss_dssp             CEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             cEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccc
Confidence            58999999985211    111111123556664   3467899999999999999888777532   2333344433321


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.. ...++..+.+++.+||..||.+||++.+++.
T Consensus       252 ~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          252 YSEET-FSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             CCTTT-TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cCchh-hcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            11111 1257889999999999999999999999864

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.61  E-value=5.6e-16  Score=99.64  Aligned_cols=107  Identities=16%  Similarity=0.246  Sum_probs=62.1

Q ss_pred             eeecCCCCCCHHHHH---HHHhcC-CCCCCCCcC-------cccCHHHHHHHHHHhcccCCCCCCCCh-HHHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEIV---ESVRKG-EKCLRPNLS-------ELTCEEEVTAIMKRCWNEDPSERPDFT-TEIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~---~~~~~g-~~~~~p~~~-------~~~~~~dv~s~g~~~we~~~~~~p~~~-~~~~~~l~~~~   69 (116)
                      ++||+|||++.....   .....| ..+.+||..       .++.++||||||+++|++..+..|... ......+....
T Consensus       164 ~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  243 (327)
T 3aln_A          164 NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV  243 (327)
T ss_dssp             EEEECCCSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCC
T ss_pred             CEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHh
Confidence            689999999853211   111112 235677752       267899999999999999888777432 12222232222


Q ss_pred             CCCCCCCCc---cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 KCLRPSLSE---LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~~~~p~~~~---~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ....+.++.   ..++.++.+|+.+||..||.+||++.+|+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          244 KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            222222221   257889999999999999999999999864

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.61  E-value=5.5e-16  Score=99.16  Aligned_cols=111  Identities=18%  Similarity=0.161  Sum_probs=69.4

Q ss_pred             eeecCCCCCCHHHHHHHH-----hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEIVESV-----RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-----~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~   69 (116)
                      ++||+|||++........     ..| ..+.+||.   ..++.++||||||+++|++..+..|...   ..+...+....
T Consensus       172 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  251 (309)
T 2h34_A          172 FAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAI  251 (309)
T ss_dssp             CEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCC
T ss_pred             CEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCC
Confidence            589999999864221110     112 23567775   2356789999999999999888777543   12223333322


Q ss_pred             CCCCCCCCccchHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHhh
Q psy12612         70 KCLRPSLSELTCEEEVTAIMKRCWNEDPSERP-DFTTLKAAIRKLN  114 (116)
Q Consensus        70 ~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-~~~~i~~~l~~~~  114 (116)
                      .  .+......++.++.+++.+||..||++|| ++.++...|+...
T Consensus       252 ~--~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l  295 (309)
T 2h34_A          252 P--RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL  295 (309)
T ss_dssp             C--CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred             C--CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence            1  11111126888999999999999999999 9999999888754

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.60  E-value=1.4e-16  Score=102.78  Aligned_cols=112  Identities=19%  Similarity=0.359  Sum_probs=72.3

Q ss_pred             eeecCCCCCCHHHHHHHH--------hcC-CCCCCCCcC---------cccCHHHHHHHHHHhcccCCC----------C
Q psy12612          2 RVELSDLRILRDEIVESV--------RKG-EKCLRPNLS---------ELTCEEEVTAIMKRCWNEDPS----------E   53 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--------~~g-~~~~~p~~~---------~~~~~~dv~s~g~~~we~~~~----------~   53 (116)
                      ++||+|||++........        ..| ..+.+||..         .++.++||||||+++|++..+          .
T Consensus       185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~  264 (342)
T 1b6c_B          185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ  264 (342)
T ss_dssp             CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence            589999999842100000        011 124566641         123579999999999998876          4


Q ss_pred             CCCCh--------HHHHHHHhcCCCCCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         54 RPDFT--------TEIVESVRKGEKCLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        54 ~p~~~--------~~~~~~l~~~~~~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .|...        ..+...+....  .+|.++.    ..++..+.+|+.+||..||++||++.+|+..|+.+.+
T Consensus       265 ~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~  336 (342)
T 1b6c_B          265 LPYYDLVPSDPSVEEMRKVVCEQK--LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  336 (342)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHTTSC--CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCccccCcCcccHHHHHHHHHHHH--hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence            45432        13333333222  2233221    2567789999999999999999999999999998753

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.60  E-value=3.1e-16  Score=100.69  Aligned_cols=106  Identities=10%  Similarity=0.114  Sum_probs=72.1

Q ss_pred             eeecCCCCCCHH----HHHHHHhcCCCCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRD----EIVESVRKGEKCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~----~~~~~~~~g~~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      ++||+|||++..    ...........+.+||.      ..++.++||||||+++|++..+..|...    ..+...+..
T Consensus       155 ~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  234 (322)
T 2ycf_A          155 LIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS  234 (322)
T ss_dssp             CEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHH
T ss_pred             eEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHh
Confidence            489999998842    11222222335667774      2367899999999999998887766432    134444555


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +.....|... ..++.++.+++.+||..||.+||++.+++.
T Consensus       235 ~~~~~~~~~~-~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          235 GKYNFIPEVW-AEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             TCCCCCHHHH-TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CccccCchhh-hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            4432222111 157789999999999999999999999864

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.60  E-value=2.9e-16  Score=101.27  Aligned_cols=105  Identities=13%  Similarity=0.191  Sum_probs=64.6

Q ss_pred             eeecCCCCCCHH-----HHHHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----------HHHHH
Q psy12612          2 RVELSDLRILRD-----EIVESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----------TEIVE   63 (116)
Q Consensus         2 ~vKi~Dfgls~~-----~~~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----------~~~~~   63 (116)
                      ++||+|||++..     ...........+.+||.   ..++.++||||+|+++|++..+..|...          .++..
T Consensus       147 ~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~  226 (325)
T 3kn6_A          147 EIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMK  226 (325)
T ss_dssp             EEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHH
T ss_pred             cEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHH
Confidence            689999999852     11111111223567775   3468899999999999999887776432          13455


Q ss_pred             HHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         64 SVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        64 ~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                      .+..+.....+.. ...++.++.+|+.+||..||.+||++.+++
T Consensus       227 ~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~~dP~~Rpt~~ell  269 (325)
T 3kn6_A          227 KIKKGDFSFEGEA-WKNVSQEAKDLIQGLLTVDPNKRLKMSGLR  269 (325)
T ss_dssp             HHTTTCCCCCSHH-HHTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred             HHHcCCCCCCccc-ccCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence            5555543222110 124778999999999999999999998875

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.60  E-value=2e-15  Score=95.67  Aligned_cols=80  Identities=15%  Similarity=0.159  Sum_probs=56.3

Q ss_pred             CCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCC
Q psy12612         25 CLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNED   96 (116)
Q Consensus        25 ~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~   96 (116)
                      +.+||.    ..++.++||||||+++|++..   |...    .++...+........+.++ ...+..+.+++.+||..|
T Consensus       196 y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~d  271 (303)
T 1zy4_A          196 YVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFD-DNKMKVEKKIIRLLIDHD  271 (303)
T ss_dssp             TSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCC-TTTSHHHHHHHHHHTCSS
T ss_pred             ccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCcccc-ccchHHHHHHHHHHHhcC
Confidence            556664    246889999999999999876   3321    1344445444332223222 256788999999999999


Q ss_pred             CCCCCCHHHHHH
Q psy12612         97 PSERPDFTTLKA  108 (116)
Q Consensus        97 p~~Rp~~~~i~~  108 (116)
                      |.+||++.+++.
T Consensus       272 p~~Rps~~~ll~  283 (303)
T 1zy4_A          272 PNKRPGARTLLN  283 (303)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             cccCcCHHHHhC
Confidence            999999999875

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.60  E-value=4.7e-16  Score=98.89  Aligned_cols=112  Identities=10%  Similarity=0.119  Sum_probs=72.2

Q ss_pred             eeecCCCCCCHHHHH------HHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HH-HHHHHhcC
Q psy12612          2 RVELSDLRILRDEIV------ESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TE-IVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~------~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~-~~~~l~~~   68 (116)
                      ++||+|||++.....      ........+.+||.   ..++.++||||+|+++|++..+..|...   .. ....+...
T Consensus       149 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~  228 (294)
T 4eqm_A          149 TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDS  228 (294)
T ss_dssp             CEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSC
T ss_pred             CEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhcc
Confidence            589999999852110      01111224566764   3357789999999999999888777533   12 22222222


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERP-DFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-~~~~i~~~l~~~~  114 (116)
                      .....+.+. ..++..+.+++.+||+.||.+|| +++++...|..+.
T Consensus       229 ~~~~~~~~~-~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          229 VPNVTTDVR-KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             CCCHHHHSC-TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             CCCcchhcc-cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence            111101111 25788999999999999999998 8899988887653

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.60  E-value=7.6e-16  Score=103.91  Aligned_cols=105  Identities=14%  Similarity=0.159  Sum_probs=73.6

Q ss_pred             eeecCCCCCCHHHHH-HHH--hcC-CCCCCCCc--CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIV-ESV--RKG-EKCLRPNL--SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-~~~--~~g-~~~~~p~~--~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      ++||+|||++..... ...  ..| ..+.+||+  ..++.++||||+|+++|++..+..|...   .++...+..+....
T Consensus       162 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  241 (486)
T 3mwu_A          162 DIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF  241 (486)
T ss_dssp             CEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCS
T ss_pred             CEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            589999999852100 001  112 23567776  3478899999999999999888777543   35566666654322


Q ss_pred             -CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 -RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 -~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       .|.  ...++.++.+|+.+||..+|.+|||+.+++.
T Consensus       242 ~~~~--~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          242 DLPQ--WRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             CSGG--GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCcc--cCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence             121  1257889999999999999999999999876

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.60  E-value=1.3e-15  Score=97.31  Aligned_cols=105  Identities=17%  Similarity=0.291  Sum_probs=68.2

Q ss_pred             eeecCCCCCCHHHHHHHH---hcC-CCCCCCCcC--------cccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVESV---RKG-EKCLRPNLS--------ELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g-~~~~~p~~~--------~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l   65 (116)
                      ++||+|||++........   ..| ..+.+||..        .++.++||||||+++|++..+..|...    .+....+
T Consensus       163 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  242 (318)
T 2dyl_A          163 QIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV  242 (318)
T ss_dssp             CEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH
T ss_pred             CEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHH
Confidence            589999999853211111   112 235566641        357789999999999999887766432    2344444


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.....|.  ...++.++.+++.+||..||.+||++.+|+.
T Consensus       243 ~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          243 LQEEPPLLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             HHSCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             hccCCCCCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            4444322221  1257899999999999999999999999865

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.60  E-value=1.9e-16  Score=100.24  Aligned_cols=104  Identities=20%  Similarity=0.236  Sum_probs=71.1

Q ss_pred             eeecCCCCCCHHHHHHHH--hcC-CCCCCCCc--CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVESV--RKG-EKCLRPNL--SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g-~~~~~p~~--~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~~~~   72 (116)
                      ++||+|||++........  ..| ..+.+||.  ..++.++||||+|+++|++..+..|...    .++...+..+....
T Consensus       170 ~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  249 (290)
T 1t4h_A          170 SVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA  249 (290)
T ss_dssp             CEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG
T ss_pred             CEEEeeCCCcccccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCcc
Confidence            589999999852110000  012 23556775  3468899999999999999887777432    24455555554321


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .  + ....++++.+++.+||..||.+||++.+++.
T Consensus       250 ~--~-~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          250 S--F-DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             G--G-GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             c--c-CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            1  1 1246688999999999999999999999875

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.60  E-value=2.4e-16  Score=105.61  Aligned_cols=105  Identities=15%  Similarity=0.132  Sum_probs=73.1

Q ss_pred             eeecCCCCCCHHHHHHHH----hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESV----RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++........    ..|. .+.+||.   ..++.++||||+|+++|++..+..|...   .++...+..+..
T Consensus       151 ~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~  230 (444)
T 3soa_A          151 AVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY  230 (444)
T ss_dssp             CEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC
T ss_pred             cEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCC
Confidence            589999999842110000    0111 3556765   3478899999999999999888777543   355666666543


Q ss_pred             C-CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 C-LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~-~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      . ..+..  ..+++++.+|+.+||..||.+||++.+++.
T Consensus       231 ~~~~~~~--~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          231 DFPSPEW--DTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             CCCTTTT--TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCcccc--ccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            2 22211  257889999999999999999999999865

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.60  E-value=2.8e-16  Score=101.58  Aligned_cols=102  Identities=17%  Similarity=0.189  Sum_probs=70.8

Q ss_pred             eeecCCCCCCHHHHHH-HH--hcCC-CCCCCCc---Ccc-cCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVE-SV--RKGE-KCLRPNL---SEL-TCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~--~~g~-~~~~p~~---~~~-~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++..... ..  ..|. .+.+||.   ..+ +.++||||+|+++|++..+..|...   .++...+..+..
T Consensus       152 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~  231 (328)
T 3fe3_A          152 NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY  231 (328)
T ss_dssp             CEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             CEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            6899999998632110 00  1122 3556765   223 3689999999999999888777432   355555555543


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      . .|.    .++.++.+|+.+||..||.+|||+.+++.
T Consensus       232 ~-~p~----~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          232 R-IPF----YMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             C-CCT----TSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             C-CCC----CCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            2 232    57889999999999999999999999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.59  E-value=8.9e-16  Score=96.73  Aligned_cols=102  Identities=15%  Similarity=0.187  Sum_probs=69.3

Q ss_pred             eeecCCCCCCHHHHH--HHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIV--ESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      ++||+|||++.....  .....| ..+.+||.   ..++.++||||+|+++|++..+..|...   .+....+...... 
T Consensus       147 ~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-  225 (279)
T 3fdn_A          147 ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-  225 (279)
T ss_dssp             CEEECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC-
T ss_pred             CEEEEeccccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCC-
Confidence            589999998742111  111112 23556664   2357789999999999998887776432   2444444443322 


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .|.    .++.++.+|+.+||..+|.+||++.+|+.
T Consensus       226 ~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          226 FPD----FVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             CCT----TSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCC----cCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            233    57889999999999999999999999975

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.59  E-value=1.9e-17  Score=108.58  Aligned_cols=101  Identities=11%  Similarity=-0.061  Sum_probs=66.9

Q ss_pred             eeecCCCCCCHHHHHH-HHhcCCCCCCCCc---C-----------cccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE-SVRKGEKCLRPNL---S-----------ELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~~~g~~~~~p~~---~-----------~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ++||+|||+++..-.. ....|..+.+||.   .           .++.++||||||+++|++..+..|...........
T Consensus       244 ~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~  323 (377)
T 3byv_A          244 GVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSE  323 (377)
T ss_dssp             CEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSG
T ss_pred             CEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchh
Confidence            6899999998631100 0011234567775   2           47889999999999999998877754311111111


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..  ...+.    .++.++.+||.+||..||.+||++.+++.
T Consensus       324 ~~--~~~~~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          324 WI--FRSCK----NIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             GG--GSSCC----CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             hh--hhhcc----CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            00  11111    58899999999999999999999999875

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.59  E-value=1.6e-16  Score=102.30  Aligned_cols=104  Identities=20%  Similarity=0.268  Sum_probs=70.3

Q ss_pred             eeecCCCCCCHHHHHHH----HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++.......    ...|. .+.+||.   ..++.++||||||+++|++..+..|...   .+....+..+..
T Consensus       179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  258 (321)
T 2c30_A          179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP  258 (321)
T ss_dssp             CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC
T ss_pred             cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC
Confidence            68999999874210000    00111 2456664   3467899999999999999988877543   234444444332


Q ss_pred             CCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                         |.+. ...++.++.+++.+||..||.+||++.+++.
T Consensus       259 ---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          259 ---PKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             ---CCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ---CCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence               2111 1257789999999999999999999999875

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.59  E-value=5.7e-16  Score=104.42  Aligned_cols=105  Identities=12%  Similarity=0.084  Sum_probs=73.9

Q ss_pred             eeecCCCCCCHHH----HHHHHhcCCCCCCCCc--CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDE----IVESVRKGEKCLRPNL--SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~----~~~~~~~g~~~~~p~~--~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      ++||+|||++..-    ..........+.+||.  ..++.++||||+|+++|++..+..|...   .++...+..+....
T Consensus       167 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  246 (484)
T 3nyv_A          167 NIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF  246 (484)
T ss_dssp             CEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             cEEEEeeeeeEEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            5899999987531    0111111224667775  4578899999999999999888777432   35666666654321


Q ss_pred             -CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 -RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 -~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       .|.  ...++.++.+|+.+||..+|.+|||+.+++.
T Consensus       247 ~~~~--~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          247 ELPQ--WKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             CSGG--GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCcc--cccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence             121  1257889999999999999999999999865

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.59  E-value=2.8e-15  Score=97.56  Aligned_cols=104  Identities=15%  Similarity=0.263  Sum_probs=68.7

Q ss_pred             eeecCCCCCCHHHHHHHH--hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHH-----------
Q psy12612          2 RVELSDLRILRDEIVESV--RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEI-----------   61 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~-----------   61 (116)
                      ++||+|||++........  ..| ..+.+||.   ..++.++||||||+++|++..+..|...   .++           
T Consensus       170 ~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  249 (360)
T 3eqc_A          170 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD  249 (360)
T ss_dssp             CEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------
T ss_pred             CEEEEECCCCcccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccccccc
Confidence            589999999964321111  112 23566764   3468899999999999998887766421   111           


Q ss_pred             -------------------------------HHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         62 -------------------------------VESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        62 -------------------------------~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                                     ...+..+.   .+..+...++.++.+|+.+||..||.+|||+.+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          250 AAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEP---PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             ------------------------CCCHHHHHHHHHHSC---CCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccC---CCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                                           11122222   122222357788999999999999999999999865

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.58  E-value=3.5e-16  Score=100.46  Aligned_cols=114  Identities=14%  Similarity=0.218  Sum_probs=73.2

Q ss_pred             eeecCCCCCCHHHHH-H--HH---hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH------HHH---
Q psy12612          2 RVELSDLRILRDEIV-E--SV---RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT------EIV---   62 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-~--~~---~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~------~~~---   62 (116)
                      ++||+|||++..... .  ..   ..| ..+.+||.   ..++.++||||||+++|++..+..|....      ...   
T Consensus       177 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~  256 (321)
T 2qkw_B          177 VPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA  256 (321)
T ss_dssp             CEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHT
T ss_pred             CEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHh
Confidence            689999999852100 0  00   001 23556664   34688999999999999988777664320      111   


Q ss_pred             -HHHhcCC--CCCCCCCC---ccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         63 -ESVRKGE--KCLRPSLS---ELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        63 -~~l~~~~--~~~~p~~~---~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                       .....+.  ....+.+.   ...++..+.+++.+||+.||++||++.+++..|+.+.+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          257 VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             HHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence             1111111  11112111   12577889999999999999999999999999988754

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.58  E-value=6.4e-16  Score=97.86  Aligned_cols=103  Identities=13%  Similarity=0.172  Sum_probs=67.5

Q ss_pred             eeecCCCCCCHHHH--HHHH--hcC-CCCCCCCcC-----cccCHHHHHHHHHHhcccCCCCCCCCh----H-HHHHHHh
Q psy12612          2 RVELSDLRILRDEI--VESV--RKG-EKCLRPNLS-----ELTCEEEVTAIMKRCWNEDPSERPDFT----T-EIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~--~~~~--~~g-~~~~~p~~~-----~~~~~~dv~s~g~~~we~~~~~~p~~~----~-~~~~~l~   66 (116)
                      ++||+|||++....  ....  ..| ..+.+||..     .++.++||||||+++|++..+..|...    . .......
T Consensus       161 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  240 (295)
T 2clq_A          161 VLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM  240 (295)
T ss_dssp             CEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHH
T ss_pred             CEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcc
Confidence            58999999885210  0001  012 135566641     257789999999999999888777532    1 1111111


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .......|.    .++.++.+++.+||..||.+||++.+++.
T Consensus       241 ~~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          241 FKVHPEIPE----SMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HCCCCCCCT----TSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             ccccccccc----cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            222222232    68899999999999999999999999864

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.58  E-value=6.3e-16  Score=97.44  Aligned_cols=106  Identities=14%  Similarity=0.147  Sum_probs=70.2

Q ss_pred             eeecCCCCCCHHH----HHHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDE----IVESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~----~~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||++...    ..........+.+||.   ..++.++||||||+++|++..+..|...   .+....+..+...
T Consensus       150 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  229 (283)
T 3bhy_A          150 RIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD  229 (283)
T ss_dssp             CEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC
T ss_pred             ceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccC
Confidence            6899999988521    1111111123556664   3467899999999999999888777433   2444444444322


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.. ...++..+.+++.+||..||.+||++.+++.
T Consensus       230 ~~~~~-~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          230 FDEEY-FSNTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             CCHHH-HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             Ccchh-cccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence            11110 1257788999999999999999999999976

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.58  E-value=1.2e-16  Score=103.11  Aligned_cols=106  Identities=13%  Similarity=0.130  Sum_probs=70.7

Q ss_pred             eeecCCCCCCHHHHHH-HH--hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVE-SV--RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~--~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||++...... ..  ..| ..+.+||.   ..++.++||||||+++|++..+..|...   .+....+......
T Consensus       156 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~  235 (326)
T 2y0a_A          156 RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE  235 (326)
T ss_dssp             CEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCC
T ss_pred             CEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCC
Confidence            6899999998521000 00  012 13556664   3468899999999999999888877543   2444444443321


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.. ...++..+.+++.+||..||.+||++.+++.
T Consensus       236 ~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          236 FEDEY-FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             CCHHH-HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cCccc-cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            11110 1257788999999999999999999999875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.58  E-value=1.7e-15  Score=96.25  Aligned_cols=105  Identities=13%  Similarity=0.215  Sum_probs=69.7

Q ss_pred             eeecCCCCCCHHHHHHHH----hcC-CCCCCCCc--------CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVESV----RKG-EKCLRPNL--------SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g-~~~~~p~~--------~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||++........    ..| ..+.+||.        ..++.++||||||+++|++..+..|...   ......+
T Consensus       155 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  234 (302)
T 2j7t_A          155 DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI  234 (302)
T ss_dssp             CEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             CEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH
Confidence            589999999754322111    112 23556663        2357799999999999999888777432   2333334


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.....  .....++.++.+++.+||..||.+||++.+++.
T Consensus       235 ~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          235 AKSDPPTL--LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             HHSCCCCC--SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             hccCCccc--CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            33332111  112267889999999999999999999999864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.57  E-value=3.4e-16  Score=98.72  Aligned_cols=105  Identities=13%  Similarity=0.110  Sum_probs=70.7

Q ss_pred             eeecCCCCCCHHHHHHHH---hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESV---RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||++........   ..| ..+.+||.   ..++.++||||+|+++|++..+..|...   .++...+..+...
T Consensus       146 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~  225 (284)
T 3kk8_A          146 AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD  225 (284)
T ss_dssp             CEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             cEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc
Confidence            489999999842100000   011 12445654   2368899999999999999888877543   2445555544432


Q ss_pred             -CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 -LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 -~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       ..+.  ...+++++.+++.+||..||++||++.+++.
T Consensus       226 ~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          226 YPSPE--WDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             CCTTT--TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCchh--hcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence             1211  1257889999999999999999999999865

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.57  E-value=3.1e-16  Score=102.52  Aligned_cols=106  Identities=14%  Similarity=0.118  Sum_probs=72.4

Q ss_pred             eeecCCCCCCHHHHHHHH---hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESV---RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      .+||+|||++........   ..|. .+.+||.   ..++.++||||+|+++|++..+..|...   .++...+..+...
T Consensus       169 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~  248 (362)
T 2bdw_A          169 AVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD  248 (362)
T ss_dssp             CEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             CEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC
Confidence            489999999853110000   0121 3556765   2478899999999999999988877543   3455556555432


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      . |......++.++.+|+.+||..||.+||++.+++.
T Consensus       249 ~-~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          249 Y-PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             C-CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             C-CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            1 11111257889999999999999999999998864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.57  E-value=3e-15  Score=94.03  Aligned_cols=102  Identities=11%  Similarity=0.122  Sum_probs=68.1

Q ss_pred             eeecCCCCCCHHH----HHHHHhcCCCCCCCCcC---c-ccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDE----IVESVRKGEKCLRPNLS---E-LTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~----~~~~~~~g~~~~~p~~~---~-~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++...    ..........+.+||..   . .+.++||||||+++|++..+..|...   .++...+..+..
T Consensus       149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  228 (276)
T 2h6d_A          149 NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF  228 (276)
T ss_dssp             CEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             CEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc
Confidence            5899999987521    11111111235677752   1 25689999999999998887766432   244555554432


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      . .|.    .++.++.+++.+||..||.+||++.+++.
T Consensus       229 ~-~~~----~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          229 Y-IPE----YLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             C-CCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             c-Cch----hcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            2 232    57889999999999999999999999976

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.57  E-value=2.8e-15  Score=94.93  Aligned_cols=107  Identities=8%  Similarity=0.027  Sum_probs=66.8

Q ss_pred             eeecCCCCCCHHHHH--HH--HhcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH-h--
Q psy12612          2 RVELSDLRILRDEIV--ES--VRKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV-R--   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~--~~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l-~--   66 (116)
                      ++||+|||++.....  ..  ...| ..+.+||.    ..++.++||||+|+++|++..+..|...   .+....+ .  
T Consensus       138 ~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  217 (288)
T 1ob3_A          138 ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL  217 (288)
T ss_dssp             CEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             CEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence            589999999864210  01  1112 23567774    2368899999999999999887766432   1222221 1  


Q ss_pred             -cCCCCCCC----------CC------C----ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 -KGEKCLRP----------SL------S----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 -~~~~~~~p----------~~------~----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       .......|          .+      +    ...++.++.+|+.+||..||++||++.+++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          218 GTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             CCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence             11000000          00      0    0246788999999999999999999999864

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.57  E-value=2.7e-16  Score=100.11  Aligned_cols=103  Identities=16%  Similarity=0.256  Sum_probs=70.4

Q ss_pred             eeecCCCCCCHHHHHHHHh----cCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESVR----KGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~----~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++.........    .|. .+.+||.   ..++.++||||||+++|++..+..|...   .+....+..+..
T Consensus       157 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  236 (303)
T 3a7i_A          157 EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP  236 (303)
T ss_dssp             CEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC
T ss_pred             CEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCC
Confidence            5899999998421000000    011 2445554   2467899999999999999888776432   244444544443


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...+.    .++.++.+|+.+||..+|.+||++.+++.
T Consensus       237 ~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~  270 (303)
T 3a7i_A          237 PTLEG----NYSKPLKEFVEACLNKEPSFRPTAKELLK  270 (303)
T ss_dssp             CCCCS----SCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCCcc----ccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            32232    68889999999999999999999999865

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.57  E-value=4.9e-16  Score=99.02  Aligned_cols=113  Identities=17%  Similarity=0.292  Sum_probs=72.1

Q ss_pred             eeecCCCCCCHHHHH--HHH----hcC-CCCCCCCc--CcccCHHHHHHHHHHhcccCCCCCCCCh-------HHHHHHH
Q psy12612          2 RVELSDLRILRDEIV--ESV----RKG-EKCLRPNL--SELTCEEEVTAIMKRCWNEDPSERPDFT-------TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~----~~g-~~~~~p~~--~~~~~~~dv~s~g~~~we~~~~~~p~~~-------~~~~~~l   65 (116)
                      ++||+|||++.....  ...    ..| ..+.+||.  ..++.++||||||+++|++..+..|...       ..+...+
T Consensus       171 ~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  250 (307)
T 2nru_A          171 TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI  250 (307)
T ss_dssp             CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHH
T ss_pred             cEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHh
Confidence            689999998752100  000    001 12445554  3468899999999999998877666321       1233333


Q ss_pred             hcCCCC----CCCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         66 RKGEKC----LRPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        66 ~~~~~~----~~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ......    ..+.+.  ...++..+.+++.+||+.+|.+||++.+++..|+.+.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          251 EDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             hhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            222110    000010  1256788999999999999999999999999999875

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.57  E-value=3.6e-16  Score=100.36  Aligned_cols=104  Identities=13%  Similarity=0.196  Sum_probs=67.3

Q ss_pred             eeecCCCCCCHHHHHH----HHhcCC-CCCCCCc--------CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVE----SVRKGE-KCLRPNL--------SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g~-~~~~p~~--------~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||++......    ....|. .+.+||.        ..++.++||||||+++|++..+..|...   ......+
T Consensus       167 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  246 (326)
T 2x7f_A          167 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI  246 (326)
T ss_dssp             CEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             CEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh
Confidence            5899999998532110    011122 3556664        1357789999999999999888777533   1223333


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .....   |.+....++..+.+++.+||..||.+||++.+++.
T Consensus       247 ~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          247 PRNPA---PRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHSCC---CCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hcCcc---ccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            33221   21212267899999999999999999999999875

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.57  E-value=1.6e-16  Score=104.79  Aligned_cols=106  Identities=12%  Similarity=0.111  Sum_probs=71.5

Q ss_pred             eeecCCCCCCHHHHHHH---HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVES---VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||++.......   ...|. .+.+||.   ..++.++||||||+++|++..+..|...   .+....+..+...
T Consensus       189 ~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~  268 (387)
T 1kob_A          189 SVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE  268 (387)
T ss_dssp             CEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC
T ss_pred             ceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence            58999999985310000   01122 3556765   2367899999999999999988777543   2444455444322


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.. ...++.++.+++.+||..||.+||++.+++.
T Consensus       269 ~~~~~-~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          269 FDEDA-FSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             CCSST-TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCccc-cccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            12111 1257889999999999999999999999875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.56  E-value=1e-15  Score=102.33  Aligned_cols=102  Identities=15%  Similarity=0.258  Sum_probs=71.4

Q ss_pred             eeecCCCCCCHHHHH--HHHh--cCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIV--ESVR--KGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~--~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++....  ....  .|. .+.+||.   ..++.++||||||+++|++..+..|...   .++...+.....
T Consensus       287 ~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~  366 (446)
T 4ejn_A          287 HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI  366 (446)
T ss_dssp             CEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             CEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCC
Confidence            689999999863111  1111  122 3567775   3478899999999999999888877543   244444444332


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      . .|.    .+++++.+|+.+||..||.+||     ++.+++.
T Consensus       367 ~-~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          367 R-FPR----TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             C-CCT----TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             C-CCc----cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            2 232    5788999999999999999999     9998864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.56  E-value=1.3e-15  Score=97.49  Aligned_cols=109  Identities=16%  Similarity=0.168  Sum_probs=66.7

Q ss_pred             eeecCCCCCCHHHHHH--H------HhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE--S------VRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~------~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||++..-...  .      ......+.+||.   ..++.++||||||+++|++..+..|...   .+.......
T Consensus       154 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~  233 (311)
T 3ork_A          154 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR  233 (311)
T ss_dssp             CEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc
Confidence            5899999998632110  0      011224566765   3467899999999999999888777532   122222222


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHH-HHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK-AAIR  111 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~-~~l~  111 (116)
                      .... .+......++.++.+++.+||+.||.+||+..+++ ..+.
T Consensus       234 ~~~~-~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  277 (311)
T 3ork_A          234 EDPI-PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV  277 (311)
T ss_dssp             CCCC-CHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             CCCC-CcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence            2211 11100125788999999999999999999765544 3443

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.56  E-value=6.4e-15  Score=98.31  Aligned_cols=107  Identities=16%  Similarity=0.170  Sum_probs=66.4

Q ss_pred             eeecCCCCCCHH----H-HHH-H--HhcC-CCCCCCCc----------CcccCHHHHHHHHHHhcccCC-CCCCCCh--H
Q psy12612          2 RVELSDLRILRD----E-IVE-S--VRKG-EKCLRPNL----------SELTCEEEVTAIMKRCWNEDP-SERPDFT--T   59 (116)
Q Consensus         2 ~vKi~Dfgls~~----~-~~~-~--~~~g-~~~~~p~~----------~~~~~~~dv~s~g~~~we~~~-~~~p~~~--~   59 (116)
                      ++||+|||++..    . ... .  ...| ..+.+||+          ..++.++||||||+++|++.+ +..|...  .
T Consensus       166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~  245 (434)
T 2rio_A          166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS  245 (434)
T ss_dssp             EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred             EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence            689999998742    1 000 0  1112 24566764          236789999999999999987 5555322  1


Q ss_pred             HHHHHHhcCCCCCC-CCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         60 EIVESVRKGEKCLR-PSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        60 ~~~~~l~~~~~~~~-p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .....+........ +.+....++.++.+|+.+||..||.+||++.+|+.
T Consensus       246 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          246 RESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hHHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            11222222222111 11112256788999999999999999999999864

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.56  E-value=1.5e-16  Score=102.04  Aligned_cols=80  Identities=14%  Similarity=0.141  Sum_probs=55.5

Q ss_pred             CCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCC
Q psy12612         25 CLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSER  100 (116)
Q Consensus        25 ~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~R  100 (116)
                      +.+||.   ..++.++||||+|+++|++..+..|... ......+..+..+..+    ...++++.+|+.+||+.||.+|
T Consensus       242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R  317 (332)
T 3qd2_B          242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLF----TQKYPQEHMMVQDMLSPSPTER  317 (332)
T ss_dssp             GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHH----HHHCHHHHHHHHHHHCSSGGGS
T ss_pred             ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCccc----ccCChhHHHHHHHHccCCCCcC
Confidence            456664   3468899999999999998876554322 1233333333321111    1456778999999999999999


Q ss_pred             CCHHHHHH
Q psy12612        101 PDFTTLKA  108 (116)
Q Consensus       101 p~~~~i~~  108 (116)
                      |++.+++.
T Consensus       318 ps~~~~l~  325 (332)
T 3qd2_B          318 PEATDIIE  325 (332)
T ss_dssp             CCHHHHHH
T ss_pred             CCHHHHhh
Confidence            99999875

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.56  E-value=1.6e-15  Score=98.07  Aligned_cols=106  Identities=13%  Similarity=0.166  Sum_probs=60.2

Q ss_pred             eeecCCCCCCHHHHH---HHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HH----HHHHhcC
Q psy12612          2 RVELSDLRILRDEIV---ESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EI----VESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~---~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~----~~~l~~~   68 (116)
                      .+||+|||++.....   ........+.+||.   ..++.++||||||+++|++..+..|....   .+    ...+..+
T Consensus       169 ~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  248 (336)
T 3fhr_A          169 VLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG  248 (336)
T ss_dssp             CEEECCCTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------
T ss_pred             eEEEeccccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcc
Confidence            489999999852111   11111223567775   34677899999999999998887775431   11    1111111


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ... .|......++.++.+|+.+||..||.+||++.+++.
T Consensus       249 ~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          249 QYG-FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             --C-CCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ccc-cCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            111 111111257889999999999999999999999976

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.56  E-value=2.2e-16  Score=103.33  Aligned_cols=106  Identities=10%  Similarity=0.095  Sum_probs=72.0

Q ss_pred             eeecCCCCCCHHHHHHH-H--hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVES-V--RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~--~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||++....... .  ..|. .+.+||+   ..++.++||||+|+++|++..+..|+..   .++...+..+...
T Consensus       157 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~  236 (361)
T 2yab_A          157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD  236 (361)
T ss_dssp             CEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC
T ss_pred             CEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC
Confidence            68999999985210000 0  0111 2456664   2468899999999999999888777543   3555566555432


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.. ...++.++.+++.+||..||.+||++.+++.
T Consensus       237 ~~~~~-~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          237 FDEEF-FSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             CCHHH-HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCchh-ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            22111 1257788999999999999999999999864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.56  E-value=5.3e-15  Score=95.37  Aligned_cols=102  Identities=16%  Similarity=0.248  Sum_probs=68.1

Q ss_pred             eeecCCCCCCHHHHHHH-Hh---cCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES-VR---KGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~---~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++....... ..   .|. .+.+||.   ..++.++||||||+++|++..+..|...   .++...+..+..
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~  238 (327)
T 3a62_A          159 HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL  238 (327)
T ss_dssp             CEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC
T ss_pred             cEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC
Confidence            58999999986432211 11   122 3566764   3468899999999999999888777543   244445544432


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      . .|.    .++.++.+|+.+||..||.+||     ++.+++.
T Consensus       239 ~-~p~----~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          239 N-LPP----YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             C-CCT----TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             C-CCC----CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            2 222    5788999999999999999999     6667653

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.56  E-value=4.2e-16  Score=99.07  Aligned_cols=104  Identities=12%  Similarity=0.147  Sum_probs=68.7

Q ss_pred             eeecCCCCCCHHHHHH-HH---hcCC-CCCCCCcCc------ccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE-SV---RKGE-KCLRPNLSE------LTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~---~~g~-~~~~p~~~~------~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~   67 (116)
                      ++||+|||++...... ..   ..|. .+.+||...      ++.++||||||+++|++..+..|...   ..+...+..
T Consensus       175 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~  254 (298)
T 2zv2_A          175 HIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKS  254 (298)
T ss_dssp             CEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhc
Confidence            6899999998521000 00   0111 356677521      35678999999999999888777543   233344443


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +... .|.  ...++.++.+|+.+||..||.+||++.+++.
T Consensus       255 ~~~~-~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          255 QALE-FPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             CCCC-CCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ccCC-CCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            3221 111  0157889999999999999999999999864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.56  E-value=2.9e-16  Score=102.16  Aligned_cols=106  Identities=16%  Similarity=0.145  Sum_probs=71.7

Q ss_pred             eeecCCCCCCHHHHHHHH----hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh--HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESV----RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT--TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~--~~~~~~l~~~~~~   71 (116)
                      .+||+|||++........    ..|. .+.+||.   ..++.++||||+|+++|++..+..|...  .++...+..+...
T Consensus       171 ~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~  250 (351)
T 3c0i_A          171 PVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYK  250 (351)
T ss_dssp             CEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCC
T ss_pred             cEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCC
Confidence            489999999853110000    0111 2456664   3468899999999999999988877543  3445555554432


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.. ...++.++.+|+.+||..||.+||++.+++.
T Consensus       251 ~~~~~-~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          251 MNPRQ-WSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             CCHHH-HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCccc-cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            22110 0257789999999999999999999999864

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.56  E-value=2e-15  Score=96.38  Aligned_cols=107  Identities=19%  Similarity=0.113  Sum_probs=65.3

Q ss_pred             eeecCCCCCCHH----H-HHHHHhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc--
Q psy12612          2 RVELSDLRILRD----E-IVESVRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK--   67 (116)
Q Consensus         2 ~vKi~Dfgls~~----~-~~~~~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~--   67 (116)
                      ++||+|||++..    . ..........+.+||.    ..++.++||||+|+++|++..+..|...   .+....+..  
T Consensus       140 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  219 (311)
T 4agu_A          140 VIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTL  219 (311)
T ss_dssp             CEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             CEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            589999998842    1 1111111123556764    3468899999999999999887766432   111111111  


Q ss_pred             ------------------CCCCCCCCC-Cc-----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 ------------------GEKCLRPSL-SE-----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ------------------~~~~~~p~~-~~-----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                        +.....+.- ..     ..++.++.+|+.+||..||.+|||+.+++.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          220 GDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             CSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             cccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence                              111111100 00     146778999999999999999999999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.56  E-value=6.1e-16  Score=97.87  Aligned_cols=106  Identities=11%  Similarity=0.085  Sum_probs=71.1

Q ss_pred             eeecCCCCCCHHHHH----HHHhcCCCCCCCCc--CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIV----ESVRKGEKCLRPNL--SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~~~~~g~~~~~p~~--~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      ++||+|||++.....    ........+.+||.  ..++.++||||||+++|++..+..|...   .++...+..+....
T Consensus       162 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  241 (287)
T 2wei_A          162 DIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF  241 (287)
T ss_dssp             CEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             cEEEeccCcceeecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            589999998752100    00000112455654  3368899999999999999887777543   34555565554321


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ... ....++.++.+++.+||..+|.+||++.+++.
T Consensus       242 ~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          242 DLP-QWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             CSG-GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             Cch-hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            111 01257889999999999999999999999976

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.55  E-value=7.2e-16  Score=104.25  Aligned_cols=105  Identities=16%  Similarity=0.130  Sum_probs=72.6

Q ss_pred             eeecCCCCCCHHHHHHHH---hcCC-CCCCCCc--CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVESV---RKGE-KCLRPNL--SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g~-~~~~p~~--~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      .+||+|||++..-.....   ..|. .+.+||+  ..++.++||||+|+++|++..+..|...   .++...+..+....
T Consensus       177 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  256 (494)
T 3lij_A          177 LIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTF  256 (494)
T ss_dssp             CEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC
T ss_pred             cEEEEECCCCeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            489999999852100000   0121 3556665  3478899999999999999888777432   35666666654322


Q ss_pred             -CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 -RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 -~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       .|..  ..++.++.+|+.+||..+|.+|||+.+++.
T Consensus       257 ~~~~~--~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          257 DSPEW--KNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             CSGGG--TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             Cchhc--ccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence             2211  257889999999999999999999999864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.55  E-value=3.6e-15  Score=95.19  Aligned_cols=107  Identities=10%  Similarity=-0.057  Sum_probs=67.7

Q ss_pred             eeecCCCCCCHHHHH----HHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC-
Q psy12612          2 RVELSDLRILRDEIV----ESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK-   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~-   70 (116)
                      ++||+|||++.....    ........+.+||.   ..++.++||||+|+++|++..+..|...   .+....+..... 
T Consensus       158 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~  237 (308)
T 3g33_A          158 TVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL  237 (308)
T ss_dssp             CEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             CEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            589999999852110    00111123566764   3468899999999999999988777532   122222221100 


Q ss_pred             CCCCCCC---------------------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLS---------------------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~---------------------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .....++                     ...++.++.+|+.+|+..||++|||+.+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            0000000                     0146788999999999999999999999864

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.55  E-value=3.5e-16  Score=101.60  Aligned_cols=106  Identities=10%  Similarity=0.145  Sum_probs=72.0

Q ss_pred             eeecCCCCCCHHHHHHH--H--hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES--V--RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~--~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------~~~~~~l~~   67 (116)
                      ++||+|||++.......  .  ..| ..+.+||.   ..++.++||||+|+++|++..+..|...      .++...+..
T Consensus       158 ~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~  237 (342)
T 2qr7_A          158 SIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS  237 (342)
T ss_dssp             GEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHH
T ss_pred             eEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHcc
Confidence            48999999985210000  0  011 13556665   2367889999999999998887776431      356666666


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +......... ..++.++.+|+.+||..||.+||++.+++.
T Consensus       238 ~~~~~~~~~~-~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          238 GKFSLSGGYW-NSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             CCCCCCSTTT-TTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCcccCcccc-ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            5543221111 257889999999999999999999998864

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.55  E-value=1.6e-16  Score=103.12  Aligned_cols=105  Identities=12%  Similarity=0.071  Sum_probs=66.9

Q ss_pred             eeecCCCCCCHHHHHHH-H--hcC-CCCCCCCcC---cc-cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIVES-V--RKG-EKCLRPNLS---EL-TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~--~~g-~~~~~p~~~---~~-~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~   73 (116)
                      ++||+|||+++...... .  ..| ..+.+||..   .+ +.++||||+|+++|++..+..|... .....+........
T Consensus       146 ~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~-~~~~~~~~~i~~~~  224 (336)
T 3h4j_B          146 NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD-EFIPNLFKKVNSCV  224 (336)
T ss_dssp             CEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBC-SSSTTCBCCCCSSC
T ss_pred             CEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHcCC
Confidence            68999999985311000 0  012 235677752   22 5689999999999999888777432 11111111111111


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..++ ..+++++.+|+.+||..||.+|||+.+|+.
T Consensus       225 ~~~p-~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          225 YVMP-DFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             CCCC-TTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             CCCc-ccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            1111 157889999999999999999999999864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.55  E-value=1.5e-15  Score=100.53  Aligned_cols=107  Identities=10%  Similarity=0.007  Sum_probs=67.6

Q ss_pred             eeecCCCCCCHHHHHHHH--------hcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVESV--------RKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--------~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||+++.-.....        ..|. .+.+||+    ..|+.++||||+|+++||+..+..|+..   .+.+..+
T Consensus       196 ~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I  275 (398)
T 4b99_A          196 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI  275 (398)
T ss_dssp             CEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHH
T ss_pred             CEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            689999999863111100        0122 3667885    2368899999999999999988776532   1233332


Q ss_pred             hcCCC-C---------------------CCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEK-C---------------------LRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~-~---------------------~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..... +                     .....+.    ..++++..+|+.+|+..||.+|||..+++.
T Consensus       276 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          276 MMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             HHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            21110 0                     0000000    135678899999999999999999999864

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.55  E-value=4.2e-15  Score=95.82  Aligned_cols=107  Identities=7%  Similarity=-0.054  Sum_probs=66.3

Q ss_pred             eeecCCCCCCHHHHH--HH--Hhc-CCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc-C
Q psy12612          2 RVELSDLRILRDEIV--ES--VRK-GEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK-G   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~--~~~-g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~-~   68 (116)
                      ++||+|||++.....  ..  ... ...+.+||.    ..++.++||||+|+++|++..+..|...   .+....+.. .
T Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~  254 (329)
T 3gbz_A          175 VLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL  254 (329)
T ss_dssp             EEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred             eEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHh
Confidence            489999999863211  00  111 223567774    2368899999999999999887766432   122222211 1


Q ss_pred             CCCCCCCCC------------------------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 EKCLRPSLS------------------------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~~~~~p~~~------------------------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.....+                        ...++.++.+|+.+||..||.+||++.+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          255 GLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             CCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            101000000                        0115678899999999999999999999865

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.55  E-value=4.4e-16  Score=100.03  Aligned_cols=106  Identities=10%  Similarity=0.099  Sum_probs=70.8

Q ss_pred             eeecCCCCCCHHHHHHH-H--hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVES-V--RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~--~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||++....... .  ..|. .+.+||.   ..++.++||||||+++|++..+..|...   .+....+..+...
T Consensus       157 ~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~  236 (321)
T 2a2a_A          157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD  236 (321)
T ss_dssp             CEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC
T ss_pred             CEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc
Confidence            68999999985210000 0  0011 2455654   3467899999999999999888877543   2445555544322


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.+. ..++..+.+++.+||..||.+||++.+++.
T Consensus       237 ~~~~~~-~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          237 FDEEFF-SHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             CCHHHH-TTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             cChhhh-cccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            221110 257788999999999999999999999875

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.55  E-value=1.6e-15  Score=98.95  Aligned_cols=97  Identities=16%  Similarity=0.207  Sum_probs=68.4

Q ss_pred             eeecCCCCCCHHHH----HHHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEI----VESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~----~~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++...    ......| ..+.+||+   ..++.++|+||+|+++|++..+..|...   .++...+..+..
T Consensus       162 ~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~  241 (353)
T 3txo_A          162 HCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV  241 (353)
T ss_dssp             CEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             CEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence            68999999985311    1111112 24667775   2478899999999999999888777543   355566655543


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                      . .|.    ..+.++.+|+.+|+..||.+||+.
T Consensus       242 ~-~p~----~~~~~~~~li~~lL~~dP~~R~~~  269 (353)
T 3txo_A          242 V-YPT----WLHEDATGILKSFMTKNPTMRLGS  269 (353)
T ss_dssp             C-CCT----TSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             C-CCC----CCCHHHHHHHHHHhhhCHHHccCC
Confidence            2 232    578889999999999999999998

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.55  E-value=6.3e-16  Score=101.43  Aligned_cols=106  Identities=12%  Similarity=0.102  Sum_probs=70.7

Q ss_pred             eeecCCCCCCHHHHHH-H--HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVE-S--VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~--~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||+++..... .  ...|. .+.+||.   ..++.++||||||+++|++..+..|...   .+.+..+..+...
T Consensus       227 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  306 (373)
T 2x4f_A          227 QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD  306 (373)
T ss_dssp             EEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC
T ss_pred             cEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Confidence            6899999998521000 0  00121 3556664   3467799999999999999888777543   2344444443321


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+. ....++.++.+|+.+||..||.+||++.+++.
T Consensus       307 ~~~~-~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          307 LEDE-EFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             SCSG-GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CChh-hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            1111 01257889999999999999999999999976

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.54  E-value=4.3e-15  Score=99.17  Aligned_cols=106  Identities=11%  Similarity=0.093  Sum_probs=64.5

Q ss_pred             eeecCCCCCCHHHHH-----HH--HhcCC-CCCCCCcC------cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHH
Q psy12612          2 RVELSDLRILRDEIV-----ES--VRKGE-KCLRPNLS------ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~~--~~~g~-~~~~p~~~------~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~   64 (116)
                      ++||+|||+++....     ..  ...|. .+.+||..      .++.++||||||+++|++..+..+.|.   ......
T Consensus       161 ~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~  240 (432)
T 3p23_A          161 KAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI  240 (432)
T ss_dssp             CEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH
T ss_pred             eEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH
Confidence            578999998742110     11  11122 46678752      245689999999999999884333332   122222


Q ss_pred             HhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         65 VRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        65 l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +...... ....+....+..+.+|+.+||+.||.+||++.+++.
T Consensus       241 ~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          241 LLGACSL-DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             HTTCCCC-TTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HhccCCc-cccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            2222111 111111245667889999999999999999999873

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.54  E-value=1.2e-15  Score=100.63  Aligned_cols=113  Identities=13%  Similarity=0.155  Sum_probs=73.5

Q ss_pred             eeecCCCCCCHHHHHHHH---hcC-CCCCCCCc-----------CcccCHHHHHHHHHHhcccCCCCCCCCh-------H
Q psy12612          2 RVELSDLRILRDEIVESV---RKG-EKCLRPNL-----------SELTCEEEVTAIMKRCWNEDPSERPDFT-------T   59 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g-~~~~~p~~-----------~~~~~~~dv~s~g~~~we~~~~~~p~~~-------~   59 (116)
                      ++||+|||+++.......   ..| ..+.+||.           ..++.++||||||+++|++..+..|+..       .
T Consensus       154 ~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~  233 (396)
T 4eut_A          154 VYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK  233 (396)
T ss_dssp             EEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCH
T ss_pred             eEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchH
Confidence            489999999852100000   012 23556664           2356789999999999998887776321       2


Q ss_pred             HHHHHHhcCCCCCCC---------------CCC-----ccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         60 EIVESVRKGEKCLRP---------------SLS-----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        60 ~~~~~l~~~~~~~~p---------------~~~-----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +++..+..+.....+               .++     ....+..+.+++.+||..||++||++.++...+..+.
T Consensus       234 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il  308 (396)
T 4eut_A          234 EVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (396)
T ss_dssp             HHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence            444444443321000               000     1246778899999999999999999999999888764

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.54  E-value=8.3e-17  Score=103.42  Aligned_cols=111  Identities=14%  Similarity=0.164  Sum_probs=70.2

Q ss_pred             eeecCCCCCCHHHHHHH--Hh---cCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH--------HHHHH
Q psy12612          2 RVELSDLRILRDEIVES--VR---KGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT--------EIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~---~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~--------~~~~~   64 (116)
                      ++||+|||++.......  ..   .|. .+.+||.   ..++.++||||||+++|++..+..|....        .....
T Consensus       172 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  251 (326)
T 3uim_A          172 EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW  251 (326)
T ss_dssp             CEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHH
T ss_pred             CEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHH
Confidence            68999999985210000  00   011 2456664   34678999999999999998888775321        01111


Q ss_pred             Hhc---CCC---CCCCCCC---ccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy12612         65 VRK---GEK---CLRPSLS---ELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK  112 (116)
Q Consensus        65 l~~---~~~---~~~p~~~---~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~  112 (116)
                      +..   ...   ...+.+.   ....+.++.+++.+||+.||.+||++.+|+..|+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             HTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             HHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            111   110   1111111   12456789999999999999999999999999875

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.54  E-value=4.9e-15  Score=96.97  Aligned_cols=84  Identities=11%  Similarity=0.098  Sum_probs=55.0

Q ss_pred             CCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc-----------------------------
Q psy12612         25 CLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK-----------------------------   67 (116)
Q Consensus        25 ~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~-----------------------------   67 (116)
                      +.+||+    ..|+.++||||+|++++|+..+..|.+.    .+.+..+..                             
T Consensus       212 Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~  291 (361)
T 4f9c_A          212 FRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDL  291 (361)
T ss_dssp             GCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCH
T ss_pred             ccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhh
Confidence            567875    2478899999999999999998888653    111111100                             


Q ss_pred             --------CCCCCCCCC-----------C-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 --------GEKCLRPSL-----------S-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 --------~~~~~~p~~-----------~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                              +.....|.+           . ...++++..+|+.+|+..||++|+|..+++.
T Consensus       292 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~  352 (361)
T 4f9c_A          292 RKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALL  352 (361)
T ss_dssp             HHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             hHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                    000000100           0 0146678899999999999999999999864

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.54  E-value=6.2e-17  Score=105.89  Aligned_cols=107  Identities=12%  Similarity=-0.057  Sum_probs=67.7

Q ss_pred             eeecCCCCCCHHHHHH--HHhcCCCCCCCCc-----CcccCHHHHHHHHHHhcccCCCCCCCChH--HHHHHHhc---C-
Q psy12612          2 RVELSDLRILRDEIVE--SVRKGEKCLRPNL-----SELTCEEEVTAIMKRCWNEDPSERPDFTT--EIVESVRK---G-   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~g~~~~~p~~-----~~~~~~~dv~s~g~~~we~~~~~~p~~~~--~~~~~l~~---~-   68 (116)
                      ++||+|||+++..-..  ....+..+.+||.     ..++.++||||||+++|++..+..|....  ........   . 
T Consensus       232 ~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~  311 (371)
T 3q60_A          232 RLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRV  311 (371)
T ss_dssp             CEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTS
T ss_pred             CEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhh
Confidence            6899999998531100  1112234667775     24688999999999999998877664431  00000000   0 


Q ss_pred             CCCCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 EKCLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~~~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .......++ ...++.++.+||.+||..||++||++.+++.
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          312 PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             CCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             ccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            000011111 1267899999999999999999999999854

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.53  E-value=2.5e-15  Score=96.07  Aligned_cols=106  Identities=11%  Similarity=0.103  Sum_probs=68.6

Q ss_pred             eeecCCCCCCHHHHHH---------HH--hcCC-CCCCCCc--------CcccCHHHHHHHHHHhcccCCCCCCCCh---
Q psy12612          2 RVELSDLRILRDEIVE---------SV--RKGE-KCLRPNL--------SELTCEEEVTAIMKRCWNEDPSERPDFT---   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---------~~--~~g~-~~~~p~~--------~~~~~~~dv~s~g~~~we~~~~~~p~~~---   58 (116)
                      .+||+|||++......         ..  ..|. .+.+||.        ..++.++||||||+++|++..+..|...   
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~  231 (316)
T 2ac3_A          152 PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG  231 (316)
T ss_dssp             SEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCC
T ss_pred             ceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccc
Confidence            4899999998532110         00  0122 3566764        1267789999999999998887766421   


Q ss_pred             ---------------HHHHHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         59 ---------------TEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        59 ---------------~~~~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                     ..+...+..+... .|......++.++.+|+.+||..||.+||++.+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          232 SDCGWDRGEACPACQNMLFESIQEGKYE-FPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             SCSCC----CCHHHHHHHHHHHHHCCCC-CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccccccccccchhHHHHHHHHHhccCcc-cCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence                           1344455544321 111001247788999999999999999999999875

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.53  E-value=1.6e-16  Score=102.37  Aligned_cols=106  Identities=8%  Similarity=0.086  Sum_probs=71.6

Q ss_pred             eeecCCCCCCHHHHHHH---HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVES---VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||++..-....   ...|. .+.+||.   ..++.++||||+|+++|++..+..|...   .++...+..+...
T Consensus       142 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~  221 (321)
T 1tki_A          142 TIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT  221 (321)
T ss_dssp             CEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC
T ss_pred             CEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCC
Confidence            58999999985210000   00111 2456664   2357899999999999999888777543   3555555554432


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+. ....++.++.+++.+||..||.+||++.+++.
T Consensus       222 ~~~~-~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          222 FDEE-AFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             CCHH-HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CChh-hhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1110 01257889999999999999999999999875

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.53  E-value=2.6e-15  Score=97.43  Aligned_cols=102  Identities=15%  Similarity=0.236  Sum_probs=71.2

Q ss_pred             eeecCCCCCCHHHHHHHH----hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESV----RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++.......    ..| ..+.+||.   ..++.++|+||+|+++|++..+..|...   .++...+..+..
T Consensus       143 ~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~  222 (337)
T 1o6l_A          143 HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI  222 (337)
T ss_dssp             CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             CEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCC
Confidence            589999999863110000    011 13567775   3478899999999999999888877543   244445544332


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                       ..|.    .++.++.+|+.+||..||.+||     ++.+|+.
T Consensus       223 -~~p~----~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          223 -RFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             -CCCT----TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             -CCCC----CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence             2232    5788999999999999999999     8888754

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.53  E-value=1.2e-15  Score=102.92  Aligned_cols=102  Identities=12%  Similarity=0.117  Sum_probs=71.1

Q ss_pred             eeecCCCCCCHHHHHHH---HhcCC-CCCCCCcC---cc-cCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES---VRKGE-KCLRPNLS---EL-TCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g~-~~~~p~~~---~~-~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++......   ...|. .+.+||..   .+ +.++||||+|+++|++..+..|...   ..+...+..+..
T Consensus       154 ~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~  233 (476)
T 2y94_A          154 NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF  233 (476)
T ss_dssp             CEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCC
T ss_pred             CeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCc
Confidence            68999999985311000   00121 35566641   22 5689999999999999887776432   355566665543


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      . .|.    .+++++.+|+.+||..||.+||++.+|+.
T Consensus       234 ~-~p~----~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          234 Y-TPQ----YLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             C-CCT----TCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             C-CCc----cCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            2 233    57889999999999999999999999975

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.53  E-value=7.8e-16  Score=96.87  Aligned_cols=102  Identities=13%  Similarity=0.162  Sum_probs=57.6

Q ss_pred             eeecCCCCCCHHH----H-HHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDE----I-VESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~----~-~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++...    . .........+.+||.   ..++.++||||||+++|++..+..|...   .+....+.... 
T Consensus       150 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-  228 (278)
T 3cok_A          150 NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLAD-  228 (278)
T ss_dssp             CEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSC-
T ss_pred             CEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcc-
Confidence            6899999987421    0 011111123566775   2356789999999999998877766432   12222221111 


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...|.    .++.++.+++.+||..||.+||++.+++.
T Consensus       229 ~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          229 YEMPS----FLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             CCCCT----TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cCCcc----ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            11222    57889999999999999999999999864

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.53  E-value=4.4e-16  Score=100.06  Aligned_cols=99  Identities=15%  Similarity=0.174  Sum_probs=66.5

Q ss_pred             eeecCCCCCCHHHHHHHH--hcCC-CCCCCCc---Cc-ccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCCC
Q psy12612          2 RVELSDLRILRDEIVESV--RKGE-KCLRPNL---SE-LTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRP   74 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g~-~~~~p~~---~~-~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~p   74 (116)
                      ++||+|||++........  ..|. .+.+||.   .. ++.++||||||+++|++..+..|.....   .+..+.... +
T Consensus       188 ~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~---~~~~~~~~~-~  263 (320)
T 3a99_A          188 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE---EIIRGQVFF-R  263 (320)
T ss_dssp             EEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---HHHHCCCCC-S
T ss_pred             CEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh---hhhcccccc-c
Confidence            689999999852100000  0111 2456664   12 2567899999999999998887755311   222222222 2


Q ss_pred             CCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         75 SLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        75 ~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .    .++.++.+|+.+||..||.+||++.+|+.
T Consensus       264 ~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          264 Q----RVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             S----CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             c----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            2    57889999999999999999999999875

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.52  E-value=7.8e-15  Score=96.02  Aligned_cols=107  Identities=8%  Similarity=-0.040  Sum_probs=64.0

Q ss_pred             eeecCCCCCCHHHHHHHH---hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESV---RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||++........   ..| ..+.+||.   ..++.++||||+|+++|++..+..|...   .+....+......
T Consensus       165 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~  244 (371)
T 2xrw_A          165 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT  244 (371)
T ss_dssp             CEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCC
T ss_pred             CEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            689999999864221111   112 23566765   3468899999999999999888766432   1222222221111


Q ss_pred             C------------------CCCC--------------Cc-----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 L------------------RPSL--------------SE-----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~------------------~p~~--------------~~-----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .                  .|..              +.     ...+.++.+|+.+|+..||.+|||+.+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          245 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             CCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence            0                  0100              00     012567899999999999999999999875

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.52  E-value=1.6e-15  Score=96.48  Aligned_cols=102  Identities=14%  Similarity=0.213  Sum_probs=69.8

Q ss_pred             eeecCCCCCCHHHHHH--H----HhcC-CCCCCCCcC-----cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE--S----VRKG-EKCLRPNLS-----ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~----~~~g-~~~~~p~~~-----~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||++......  .    ...| ..+.+||..     .++.++||||||+++|++..+..|...   .++...+.
T Consensus       147 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~  226 (305)
T 2wtk_C          147 TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIG  226 (305)
T ss_dssp             CEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             cEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHh
Confidence            5899999998521000  0    0001 124456541     135689999999999999888777432   24555555


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .+... .|.    .++.++.+++.+||..||.+||++.+++.
T Consensus       227 ~~~~~-~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          227 KGSYA-IPG----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             HCCCC-CCS----SSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             cCCCC-CCC----ccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            55432 222    68899999999999999999999999975

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.51  E-value=1.3e-15  Score=103.28  Aligned_cols=106  Identities=13%  Similarity=0.073  Sum_probs=72.6

Q ss_pred             eeecCCCCCCHHHHHHH-H--hcCC-CCCCCCc--CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVES-V--RKGE-KCLRPNL--SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~--~~g~-~~~~p~~--~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      ++||+|||++....... .  ..|. .+.+||.  ..++.++||||+|+++|++..+..|...   .++...+..+....
T Consensus       187 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  266 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF  266 (504)
T ss_dssp             SEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             cEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            58999999985210000 0  0121 3456664  3478899999999999999888777432   35666666654322


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ... ....++.++.+|+.+||..||.+|||+.+++.
T Consensus       267 ~~~-~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          267 DFN-DWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             CHH-HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             Ccc-ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            110 01257789999999999999999999999864

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.51  E-value=7.7e-16  Score=96.86  Aligned_cols=106  Identities=13%  Similarity=0.128  Sum_probs=70.0

Q ss_pred             eeecCCCCCCHHHHHHHH---hcC-CCCCCCCc--CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVESV---RKG-EKCLRPNL--SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g-~~~~~p~~--~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      ++||+|||++........   ..| ..+.+||.  ..++.++||||+|+++|++..+..|...   .++...+..+....
T Consensus       147 ~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  226 (277)
T 3f3z_A          147 PLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTF  226 (277)
T ss_dssp             CEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             cEEEEecccceeccCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            589999998842100000   011 12455654  3368899999999999999887776432   34555555554321


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       |.-....++.++.+++.+||+.||.+||++.+++.
T Consensus       227 -~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          227 -PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             -CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             -CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence             11001147789999999999999999999999864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.51  E-value=9.6e-16  Score=99.05  Aligned_cols=102  Identities=19%  Similarity=0.259  Sum_probs=69.4

Q ss_pred             eeecCCCCCCHHHHHHH----HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++.......    ...| ..+.+||.   ..++.++||||||+++|++..+..|...   .+....+..+..
T Consensus       179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  258 (335)
T 2owb_A          179 EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY  258 (335)
T ss_dssp             CEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC
T ss_pred             CEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCC
Confidence            68999999985210000    0011 12455654   2367899999999999999887777432   234444444332


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      . .|.    .++.++.+|+.+||..||.+||++.+++.
T Consensus       259 ~-~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          259 S-IPK----HINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             C-CCT----TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             C-CCc----cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            2 232    57889999999999999999999999865

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.51  E-value=1.6e-15  Score=96.17  Aligned_cols=107  Identities=10%  Similarity=0.068  Sum_probs=67.1

Q ss_pred             eeecCCCCCCHHHHHH--HH--hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc-
Q psy12612          2 RVELSDLRILRDEIVE--SV--RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK-   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~--~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~-   67 (116)
                      ++||+|||++......  ..  ..| ..+.+||.    ..++.++||||+|+++|++..+..|.+.    .+....+.. 
T Consensus       139 ~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~  218 (292)
T 3o0g_A          139 ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL  218 (292)
T ss_dssp             CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHH
T ss_pred             CEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHH
Confidence            5899999998521000  00  001 12456664    2268899999999999999988888653    122222211 


Q ss_pred             -CCC--CCC------------CC------CC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 -GEK--CLR------------PS------LS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 -~~~--~~~------------p~------~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       +..  ...            +.      +.  ...++.++.+|+.+|+..||.+|||+.+++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          219 LGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence             000  000            00      00  0146788999999999999999999999865

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.51  E-value=1.1e-14  Score=92.75  Aligned_cols=93  Identities=11%  Similarity=0.158  Sum_probs=62.4

Q ss_pred             eeecCCCCCCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHH---HhcCCCCCCCCCCc
Q psy12612          2 RVELSDLRILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVES---VRKGEKCLRPSLSE   78 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~---l~~~~~~~~p~~~~   78 (116)
                      ++||+|||++....      +        ..++.++||||+|+++|++..+..|.........   +..........++.
T Consensus       158 ~~kl~Dfg~a~~~~------~--------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  223 (299)
T 3m2w_A          158 ILKLTDFGFAKETT------G--------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN  223 (299)
T ss_dssp             CEEECCCTTCEECT------T--------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCH
T ss_pred             cEEEeccccccccc------c--------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCc
Confidence            58999999984210      0        1247899999999999999888777653111111   11111111111221


Q ss_pred             ---cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         79 ---LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        79 ---~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                         ..++.++.+++.+||..||.+||++.+++.
T Consensus       224 ~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          224 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence               257889999999999999999999999875

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.50  E-value=8.4e-16  Score=100.51  Aligned_cols=105  Identities=15%  Similarity=0.112  Sum_probs=69.5

Q ss_pred             eeecCCCCCCHHHHHH-HH--hcCC-CCCCCCcC---------cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVE-SV--RKGE-KCLRPNLS---------ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~--~~g~-~~~~p~~~---------~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||++..-... ..  ..|. .+.+||..         .++.++||||||+++|++..+..|...   ......+
T Consensus       238 ~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i  317 (365)
T 2y7j_A          238 QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI  317 (365)
T ss_dssp             CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            6899999987421000 00  0111 24556531         357789999999999999988877543   2444445


Q ss_pred             hcCCCC-CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKC-LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~-~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+... ..|.  ...++.++.+++.+||..||.+||++.+++.
T Consensus       318 ~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          318 MEGQYQFSSPE--WDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             HHTCCCCCHHH--HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HhCCCCCCCcc--cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            444321 1111  1256788999999999999999999999875

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.50  E-value=6.5e-15  Score=93.47  Aligned_cols=107  Identities=10%  Similarity=0.158  Sum_probs=67.0

Q ss_pred             eeecCCCCCCHHHH-----H-H---HHhcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHH
Q psy12612          2 RVELSDLRILRDEI-----V-E---SVRKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~-----~-~---~~~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~   64 (116)
                      ++||+|||++....     . .   ....| ..+.+||.    ..++.++||||||+++|++..+..|...   ......
T Consensus       159 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  238 (303)
T 2vwi_A          159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML  238 (303)
T ss_dssp             CEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH
T ss_pred             CEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH
Confidence            58999999874210     0 0   01112 23566764    2368899999999999999887776432   122222


Q ss_pred             HhcCCCCCCCC-C----CccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         65 VRKGEKCLRPS-L----SELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        65 l~~~~~~~~p~-~----~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...+.....+. .    ....++.++.+|+.+||..||.+||++.+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          239 TLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             HHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            22221111000 0    01257788999999999999999999999875

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.50  E-value=7.9e-15  Score=93.96  Aligned_cols=107  Identities=11%  Similarity=-0.025  Sum_probs=65.3

Q ss_pred             eeecCCCCCCHHHH---HHHH-hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---H----HHHHHH
Q psy12612          2 RVELSDLRILRDEI---VESV-RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---T----EIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~---~~~~-~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~----~~~~~l   65 (116)
                      ++||+|||++....   .... ..| ..+.+||.    ..++.++||||+|+++|++..+..|...   .    .+...+
T Consensus       157 ~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~  236 (311)
T 3niz_A          157 ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL  236 (311)
T ss_dssp             CEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHH
T ss_pred             CEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHH
Confidence            58999999985210   0000 111 23556764    2468899999999999998887766422   1    122211


Q ss_pred             hcCCCCCCCC-------------------CC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPS-------------------LS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~-------------------~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ........+.                   ..  ...++.++.+|+.+|+..||.+|||+.+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          237 GTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             CCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            1111000000                   00  0135578899999999999999999999875

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.50  E-value=1.2e-15  Score=98.26  Aligned_cols=104  Identities=16%  Similarity=0.112  Sum_probs=66.3

Q ss_pred             eeecCCCCCCHHHHHH---H---HhcCC-CCCCCCc---Cc-ccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE---S---VRKGE-KCLRPNL---SE-LTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~---~~~g~-~~~~p~~---~~-~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||++..-...   .   ...|. .+.+||.   .. ++.++||||+|+++|++..+..|...    ........
T Consensus       143 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~  222 (323)
T 3tki_A          143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK  222 (323)
T ss_dssp             CEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH
T ss_pred             CEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh
Confidence            5899999998521000   0   00111 2456664   12 25679999999999999887776432    12222222


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .......+   ...++.++.+|+.+||..||.+||++.+++.
T Consensus       223 ~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          223 EKKTYLNP---WKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             TTCTTSTT---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cccccCCc---cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            22221111   1257889999999999999999999999864

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.50  E-value=1.3e-13  Score=88.42  Aligned_cols=110  Identities=15%  Similarity=0.156  Sum_probs=70.5

Q ss_pred             eeecCCCCCCHHHHHHHH---hcCC-CCCCCCc-----------CcccCHHHHHHHHHHhcccCCCCCCCCh-------H
Q psy12612          2 RVELSDLRILRDEIVESV---RKGE-KCLRPNL-----------SELTCEEEVTAIMKRCWNEDPSERPDFT-------T   59 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g~-~~~~p~~-----------~~~~~~~dv~s~g~~~we~~~~~~p~~~-------~   59 (116)
                      ++||+|||++..-.....   ..|. .+.+||.           ..++.++||||||+++|++..+..|+..       .
T Consensus       154 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  233 (319)
T 4euu_A          154 VYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK  233 (319)
T ss_dssp             EEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCH
T ss_pred             eEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhH
Confidence            489999999852100000   0011 2445553           2367899999999999999888776421       2


Q ss_pred             HHHHHHhcCCCCC---------------------CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy12612         60 EIVESVRKGEKCL---------------------RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK  112 (116)
Q Consensus        60 ~~~~~l~~~~~~~---------------------~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~  112 (116)
                      ++...+..+....                     ...+ ....+..+.+++.+||..||++||++.+++....+
T Consensus       234 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d  306 (319)
T 4euu_A          234 EVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSL-SRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD  306 (319)
T ss_dssp             HHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSS-CHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHhcCCCcccchhhhcccCCccccCccCCccccc-chhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence            3444443322110                     0011 12467788999999999999999999999887654

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.50  E-value=3e-15  Score=98.39  Aligned_cols=84  Identities=11%  Similarity=0.022  Sum_probs=54.4

Q ss_pred             CCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC-CC------------------------
Q psy12612         25 CLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK-CL------------------------   72 (116)
Q Consensus        25 ~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~-~~------------------------   72 (116)
                      +.+||+    ..++.++||||+|+++|++..+..|+..   .+.+..+..... +.                        
T Consensus       196 y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  275 (388)
T 3oz6_A          196 YRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVE  275 (388)
T ss_dssp             GCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC
T ss_pred             cCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCccccc
Confidence            556764    3478899999999999999887766432   111221111000 00                        


Q ss_pred             ------CCCC-----------CccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 ------RPSL-----------SELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ------~p~~-----------~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                            ...+           +...+++++.+|+.+||..||.+|||+.+++.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~  328 (388)
T 3oz6_A          276 IRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALK  328 (388)
T ss_dssp             -----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhC
Confidence                  0000           00146778999999999999999999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.50  E-value=1.8e-15  Score=95.99  Aligned_cols=102  Identities=19%  Similarity=0.253  Sum_probs=69.1

Q ss_pred             eeecCCCCCCHHHHHHH----HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++.......    ...|. .+.+||.   ..++.++||||+|+++|++..+..|...   .+....+..+..
T Consensus       153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  232 (294)
T 2rku_A          153 EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY  232 (294)
T ss_dssp             CEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC
T ss_pred             CEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccC
Confidence            68999999985310000    00111 2445654   2357899999999999999887776432   234444444332


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       ..|.    .++..+.+++.+||..||++||++.+++.
T Consensus       233 -~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          233 -SIPK----HINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             -CCCT----TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             -CCcc----ccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence             2232    57889999999999999999999999865

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.49  E-value=2.9e-15  Score=97.56  Aligned_cols=102  Identities=15%  Similarity=0.217  Sum_probs=71.1

Q ss_pred             eeecCCCCCCHHHHHHH-HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIVES-VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~   73 (116)
                      ++||+|||++....... ...| ..+.+||.   ..++.++|+||||+++|++..+..|...   .++...+..+... .
T Consensus       179 ~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~  257 (350)
T 1rdq_E          179 YIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-F  257 (350)
T ss_dssp             CEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-C
T ss_pred             CEEEcccccceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCC-C
Confidence            58999999985210000 0011 13556664   3468899999999999999888777543   3555566655422 2


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERPD-----FTTLKA  108 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~-----~~~i~~  108 (116)
                      |.    .++.++.+|+.+||..||.+||+     +.+|..
T Consensus       258 p~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             CT----TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             CC----CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence            32    68899999999999999999998     777753

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.49  E-value=3.3e-15  Score=95.46  Aligned_cols=104  Identities=13%  Similarity=0.238  Sum_probs=67.5

Q ss_pred             eeecCCCCCCHHHHHHHHh----cCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESVR----KGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~----~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++.........    .|. .+.+||.   ..++.++||||||+++|++..+..|...   ......+.....
T Consensus       163 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  242 (314)
T 3com_A          163 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPP  242 (314)
T ss_dssp             CEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC
T ss_pred             CEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC
Confidence            5899999998421000000    011 2445554   2367889999999999999888777543   122223333221


Q ss_pred             CCCCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                         +.+. +..++.++.+|+.+||..||.+||++.+++.
T Consensus       243 ---~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          243 ---PTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             ---CCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ---cccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence               1111 1257889999999999999999999999864

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.49  E-value=1.5e-14  Score=97.31  Aligned_cols=107  Identities=10%  Similarity=0.024  Sum_probs=63.3

Q ss_pred             eeecCCCCCCHHHHHH---HHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc--CC
Q psy12612          2 RVELSDLRILRDEIVE---SVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK--GE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~--~~   69 (116)
                      ++||+|||+++.....   ....|. .+.+||+   ..|+.++||||+|+++|++..+..|+..   .+.+..+..  |.
T Consensus       202 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~  281 (464)
T 3ttj_A          202 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT  281 (464)
T ss_dssp             CEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred             CEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            6899999999743211   001122 3556765   3478899999999999998877666432   111111111  00


Q ss_pred             C----------------CCCCC---CC-----c-----------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 K----------------CLRPS---LS-----E-----------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~----------------~~~p~---~~-----~-----------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .                ...|.   ..     +           ...+.++.+|+.+|+..||++|||+.+++.
T Consensus       282 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          282 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             CCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0                00000   00     0           001567899999999999999999999865

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.49  E-value=1.3e-14  Score=93.37  Aligned_cols=107  Identities=7%  Similarity=0.023  Sum_probs=65.9

Q ss_pred             eeecCCCCCCHHHH-----HHHHhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEI-----VESVRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~-----~~~~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~   69 (116)
                      ++||+|||++....     .........+.+||.    ..++.++||||+|+++|++..+..|...   .+....+....
T Consensus       138 ~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~  217 (324)
T 3mtl_A          138 ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL  217 (324)
T ss_dssp             CEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             CEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            68999999874211     011111223556764    2468899999999999999887766432   12222222111


Q ss_pred             C-CC---CCCCC---------------------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 K-CL---RPSLS---------------------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~-~~---~p~~~---------------------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      . +.   .|...                     ...++.++.+|+.+|+..||.+|||+.+++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          218 GTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             CCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            0 00   11000                     0135678899999999999999999999864

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.49  E-value=2.8e-15  Score=94.68  Aligned_cols=102  Identities=11%  Similarity=0.097  Sum_probs=68.5

Q ss_pred             eeecCCCCCCHHHHHH--HHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVE--SVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      ++||+|||++......  ....|. .+.+||.   ..++.++||||||+++|++..+..|...   .+....+..+.. .
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~  230 (284)
T 2vgo_A          152 ELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL-K  230 (284)
T ss_dssp             CEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC-C
T ss_pred             CEEEecccccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcccc-C
Confidence            5899999987421000  000111 2445554   2357889999999999998887776432   234444444332 2


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .|.    .++.++.+++.+||..||.+||++.+++.
T Consensus       231 ~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          231 FPP----FLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             CCT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCC----cCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            222    57889999999999999999999999875

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.49  E-value=6e-15  Score=96.11  Aligned_cols=102  Identities=17%  Similarity=0.184  Sum_probs=67.7

Q ss_pred             eeecCCCCCCHHH----HHHH-HhcC-CCCCCCCcC-----cccCHHHHHHHHHHhcccCCCCCCCCh-------HHHHH
Q psy12612          2 RVELSDLRILRDE----IVES-VRKG-EKCLRPNLS-----ELTCEEEVTAIMKRCWNEDPSERPDFT-------TEIVE   63 (116)
Q Consensus         2 ~vKi~Dfgls~~~----~~~~-~~~g-~~~~~p~~~-----~~~~~~dv~s~g~~~we~~~~~~p~~~-------~~~~~   63 (116)
                      ++||+|||+++.-    .... ...| ..+.+||..     .++.++||||||+++|++..+..|...       ..+..
T Consensus       197 ~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~  276 (355)
T 1vzo_A          197 HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR  276 (355)
T ss_dssp             CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH
T ss_pred             cEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHH
Confidence            6899999987421    0000 0112 245677751     257889999999999999887777431       23333


Q ss_pred             HHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         64 SVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        64 ~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      .+..... ..|.    .++..+.+|+.+||..||.+||     ++.+++.
T Consensus       277 ~~~~~~~-~~~~----~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~  321 (355)
T 1vzo_A          277 RILKSEP-PYPQ----EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  321 (355)
T ss_dssp             HHHHCCC-CCCT----TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             HHhccCC-CCCc----ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence            4433322 2222    5788899999999999999999     8888764

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.48  E-value=5.1e-15  Score=95.32  Aligned_cols=102  Identities=14%  Similarity=0.141  Sum_probs=70.0

Q ss_pred             eeecCCCCCCHHHHHH-HHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIVE-SVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~   73 (116)
                      ++||+|||++...... ....|. .+.+||.   ..++.++|+||+|+++|++..+..|...   .+....+..+.. ..
T Consensus       144 ~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~  222 (318)
T 1fot_A          144 HIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL-RF  222 (318)
T ss_dssp             CEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC-CC
T ss_pred             CEEEeecCcceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CC
Confidence            6899999998531000 000121 3556664   3468899999999999999888777543   244444544432 22


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      |.    ..+.++.+|+.+|+..||.+||     +..+|..
T Consensus       223 p~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          223 PP----FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             CT----TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CC----CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence            32    5788999999999999999999     7787753

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.48  E-value=1.7e-15  Score=98.05  Aligned_cols=99  Identities=15%  Similarity=0.133  Sum_probs=67.0

Q ss_pred             eeecCCCCCCHHHHHHHH---hcCC-CCCCCCc---Ccc-cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIVESV---RKGE-KCLRPNL---SEL-TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g~-~~~~p~~---~~~-~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~   73 (116)
                      ++||+|||++........   ..|. .+.+||.   ..+ +.++||||||+++|++..+..|...  ....+..  ....
T Consensus       168 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~--~~~~~~~--~~~~  243 (335)
T 3dls_A          168 TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE--LEETVEA--AIHP  243 (335)
T ss_dssp             CEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS--GGGGTTT--CCCC
T ss_pred             cEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh--HHHHHhh--ccCC
Confidence            689999999852100000   0121 3556664   223 6689999999999999988877653  1111111  1222


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      |.    .++.++.+|+.+||..||.+||++.+++.
T Consensus       244 ~~----~~~~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          244 PY----LVSKELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             SS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             Cc----ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            32    57889999999999999999999999875

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.48  E-value=3.4e-15  Score=93.71  Aligned_cols=104  Identities=16%  Similarity=0.108  Sum_probs=66.8

Q ss_pred             eeecCCCCCCHHHHHH---HH---hcC-CCCCCCCcC---c-ccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE---SV---RKG-EKCLRPNLS---E-LTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~---~~g-~~~~~p~~~---~-~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||++......   ..   ..| ..+.+||..   . ++.++||||||+++|++..+..|...    ......+.
T Consensus       143 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  222 (276)
T 2yex_A          143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK  222 (276)
T ss_dssp             CEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH
T ss_pred             CEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh
Confidence            5899999998521000   00   011 125567652   2 25679999999999998887776432    12233333


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .......+   ...++.++.+|+.+||..||.+||++.+|+.
T Consensus       223 ~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          223 EKKTYLNP---WKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             TTCTTSTT---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hcccccCc---hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            32221111   1257889999999999999999999999864

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.48  E-value=3e-15  Score=97.55  Aligned_cols=106  Identities=12%  Similarity=0.090  Sum_probs=65.0

Q ss_pred             eeecCCCCCCHHHHHHH-HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---------HHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES-VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---------EIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---------~~~~~l~~   67 (116)
                      ++||+|||++....... ...| ..+.+||.   ..++.++||||||+++|++..+..|....         ..+..+..
T Consensus       176 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  255 (373)
T 1q8y_A          176 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE  255 (373)
T ss_dssp             EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred             eEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHH
Confidence            68999999985210000 0011 12456664   34688999999999999998887664320         11111110


Q ss_pred             --CCCC------------------------------------CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 --GEKC------------------------------------LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 --~~~~------------------------------------~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        +..+                                    ....++ ...+.++.+|+.+||..||.+||++.+++.
T Consensus       256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFS-KDEAKEISDFLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCC-HHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCC-cchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence              0000                                    000011 146778999999999999999999999865

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.48  E-value=1.4e-14  Score=92.94  Aligned_cols=107  Identities=8%  Similarity=-0.010  Sum_probs=66.7

Q ss_pred             eeecCCCCCCHHHHHHHHh---cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC-
Q psy12612          2 RVELSDLRILRDEIVESVR---KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK-   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~---~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~-   70 (116)
                      ++||+|||++.........   .| ..+.+||.   ..++.++||||||+++|++..+..|...   .+....+..... 
T Consensus       158 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~  237 (326)
T 1blx_A          158 QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL  237 (326)
T ss_dssp             CEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             CEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCC
Confidence            5899999998521100000   11 13456664   3468899999999999999887766432   122222211000 


Q ss_pred             C-------------------CCCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 C-------------------LRPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~-------------------~~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +                   ....+.  ...++.++.+|+.+||..||.+||++.+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            0                   000000  0257788999999999999999999999874

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.48  E-value=2.7e-15  Score=96.38  Aligned_cols=107  Identities=12%  Similarity=-0.013  Sum_probs=65.6

Q ss_pred             eeecCCCCCCHHHHHHH-HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC-
Q psy12612          2 RVELSDLRILRDEIVES-VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL-   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~-   72 (116)
                      ++||+|||++....... ...|. .+.+||.   ..++.++||||||+++|++..+..|...   .+....+....... 
T Consensus       175 ~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p  254 (339)
T 1z57_A          175 DIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLP  254 (339)
T ss_dssp             CEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCC
T ss_pred             CceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            48999999985311000 00111 2456664   2468899999999999998887766432   12222221100000 


Q ss_pred             --------------------------------------CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 --------------------------------------RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 --------------------------------------~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                                            .........+.++.+|+.+||..||.+||++.+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          255 KHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence                                                  000001145678999999999999999999999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.48  E-value=4e-15  Score=97.73  Aligned_cols=98  Identities=11%  Similarity=0.171  Sum_probs=68.3

Q ss_pred             eeecCCCCCCHHHHHHH----HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++......    ...|. .+.+||+   ..++.++|+||||+++||+..+..|...   .++...+..+..
T Consensus       177 ~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~  256 (373)
T 2r5t_A          177 HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL  256 (373)
T ss_dssp             CEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCC
T ss_pred             CEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc
Confidence            68999999986421100    00121 3556664   3468899999999999999988877543   245555554432


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFT  104 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~  104 (116)
                      .. |.    .++.++.+|+.+||..||.+||+..
T Consensus       257 ~~-~~----~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          257 QL-KP----NITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             CC-CS----SSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             CC-CC----CCCHHHHHHHHHHcccCHHhCCCCC
Confidence            22 22    5788999999999999999999974

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.48  E-value=5.6e-15  Score=95.23  Aligned_cols=105  Identities=20%  Similarity=0.142  Sum_probs=64.6

Q ss_pred             eeecCCCCCCHHHHHH----HHhcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHh---
Q psy12612          2 RVELSDLRILRDEIVE----SVRKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVR---   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~---   66 (116)
                      ++||+|||++......    ....|. .+.+||.    ..++.++||||+|+++|++..+..|...   .+....+.   
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  241 (331)
T 4aaa_A          162 VVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCL  241 (331)
T ss_dssp             CEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             cEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence            5899999998642111    111122 3556764    2467899999999999999888766432   11111111   


Q ss_pred             -----------------cCCCCCCCCCC--------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 -----------------KGEKCLRPSLS--------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 -----------------~~~~~~~p~~~--------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                       .+.+  .|.+.        ...++.++.+|+.+||..||.+||++.+++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          242 GNLIPRHQELFNKNPVFAGVR--LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             CSCCHHHHHHHHHCGGGTTCC--CCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             CCCChhhhhHhhhcccccccc--CccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                             0111  01110        0146788999999999999999999988864

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.48  E-value=2.7e-14  Score=94.37  Aligned_cols=107  Identities=14%  Similarity=0.025  Sum_probs=63.7

Q ss_pred             eeecCCCCCCHHHHH-----H---HHhcCCCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh-----------
Q psy12612          2 RVELSDLRILRDEIV-----E---SVRKGEKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT-----------   58 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-----~---~~~~g~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~-----------   58 (116)
                      ++||+|||+++....     .   .......+.+||+    ..++.++||||||+++|++..+..|...           
T Consensus       170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~  249 (405)
T 3rgf_A          170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY  249 (405)
T ss_dssp             CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCC
T ss_pred             cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccc
Confidence            689999999863211     0   1111123567774    2368899999999999998877665421           


Q ss_pred             -HHHHHHHhc-CCCCCCCCCCc--------------------------------cchHHHHHHHHHHhccCCCCCCCCHH
Q psy12612         59 -TEIVESVRK-GEKCLRPSLSE--------------------------------LTCEEEVTAIMKRCWNEDPSERPDFT  104 (116)
Q Consensus        59 -~~~~~~l~~-~~~~~~p~~~~--------------------------------~~~~~~l~~l~~~Cw~~~p~~Rp~~~  104 (116)
                       .+.+..+.. ...+....+..                                ...+.++.+|+.+|+..||.+|||+.
T Consensus       250 ~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~  329 (405)
T 3rgf_A          250 HHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE  329 (405)
T ss_dssp             CHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHH
T ss_pred             hHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence             011111111 00000000000                                01256788999999999999999999


Q ss_pred             HHHH
Q psy12612        105 TLKA  108 (116)
Q Consensus       105 ~i~~  108 (116)
                      +++.
T Consensus       330 e~L~  333 (405)
T 3rgf_A          330 QAMQ  333 (405)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            9864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.48  E-value=7.3e-16  Score=100.24  Aligned_cols=107  Identities=11%  Similarity=-0.010  Sum_probs=64.7

Q ss_pred             eeecCCCCCCHHHHHHH-HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIVES-VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~   73 (116)
                      ++||+|||++....... ...|. .+.+||.   ..++.++||||+|+++|++..+..|...   .+....+........
T Consensus       200 ~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p  279 (360)
T 3llt_A          200 GIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIP  279 (360)
T ss_dssp             CEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCC
T ss_pred             CEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCC
Confidence            58999999985311000 00111 2456664   3468899999999999999888776432   122222222111000


Q ss_pred             -------------------------CCCCc----------------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         74 -------------------------PSLSE----------------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        74 -------------------------p~~~~----------------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                               |.-..                ...++.+.+|+.+||+.||.+|||+.+++.
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          280 KNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             HHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence                                     00000                011256779999999999999999999864

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.48  E-value=2.2e-15  Score=100.45  Aligned_cols=55  Identities=5%  Similarity=-0.176  Sum_probs=36.6

Q ss_pred             eeecCCCCCCHHHHHHH-HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCC
Q psy12612          2 RVELSDLRILRDEIVES-VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPD   56 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~   56 (116)
                      .+||+|||++....... ...| ..+.+||.   ..++.++||||||+++|++..+..|.
T Consensus       240 ~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf  299 (429)
T 3kvw_A          240 GIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL  299 (429)
T ss_dssp             CEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ceEEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCC
Confidence            38999999985311000 0011 12556765   34788999999999999998876553

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.47  E-value=1.1e-13  Score=92.76  Aligned_cols=29  Identities=17%  Similarity=0.258  Sum_probs=26.2

Q ss_pred             chHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         80 TCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        80 ~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.++.+|+.+|+..||.+|||+.+++.
T Consensus       368 ~~s~~~~dLl~~mL~~dP~~R~t~~e~L~  396 (458)
T 3rp9_A          368 ASSADAIHLLKRMLVFNPNKRITINECLA  396 (458)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence            35788999999999999999999999875

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.47  E-value=5.2e-15  Score=103.04  Aligned_cols=101  Identities=15%  Similarity=0.138  Sum_probs=70.2

Q ss_pred             eeecCCCCCCHHHHHHH--HhcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh------HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES--VRKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT------TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~------~~~~~~l~~~   68 (116)
                      +|||+|||+++.-....  ...|. .+++||+    ..|+.++|+||+|+++||+..+..|+..      .++...+...
T Consensus       330 ~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~  409 (689)
T 3v5w_A          330 HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM  409 (689)
T ss_dssp             CEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC
T ss_pred             CEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Confidence            68999999985310000  01132 4678885    1378999999999999999998888643      1333333333


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCC-----HHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPD-----FTTLK  107 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~-----~~~i~  107 (116)
                      . ...|.    .+++++.+|+.+|+..||.+|++     +.+|.
T Consensus       410 ~-~~~p~----~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~  448 (689)
T 3v5w_A          410 A-VELPD----SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK  448 (689)
T ss_dssp             C-CCCCT----TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred             C-CCCCc----cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence            2 22233    68899999999999999999998     56664

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.47  E-value=1.1e-14  Score=101.87  Aligned_cols=97  Identities=16%  Similarity=0.237  Sum_probs=69.7

Q ss_pred             eeecCCCCCCHHHHHHHH----hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESV----RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++.......    ..| ..+.+||+   ..|+.++|+||||+++||+..+..|+..   .++...+..+..
T Consensus       480 ~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~  559 (674)
T 3pfq_A          480 HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV  559 (674)
T ss_dssp             CEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCC
T ss_pred             cEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Confidence            689999999863111000    012 23567775   3578999999999999999988777543   356666665442


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                      . .|.    .++.++.+|+.+||..||.+|+++
T Consensus       560 ~-~p~----~~s~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          560 A-YPK----SMSKEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             C-CCT----TSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred             C-CCc----cCCHHHHHHHHHHccCCHHHCCCC
Confidence            2 233    688999999999999999999997

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.47  E-value=3e-14  Score=95.02  Aligned_cols=29  Identities=7%  Similarity=0.176  Sum_probs=26.4

Q ss_pred             chHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         80 TCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        80 ~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .+++++.+|+.+||..||.+|||+.+++.
T Consensus       333 ~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  361 (432)
T 3n9x_A          333 SISDDGINLLESMLKFNPNKRITIDQALD  361 (432)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            46788999999999999999999999865

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.47  E-value=1.4e-15  Score=99.85  Aligned_cols=56  Identities=5%  Similarity=-0.161  Sum_probs=37.4

Q ss_pred             eeecCCCCCCHHHHHHH-HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCC
Q psy12612          2 RVELSDLRILRDEIVES-VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDF   57 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~   57 (116)
                      ++||+|||++....... ...|. .+.+||.   ..++.++||||||+++|++..+..|..
T Consensus       199 ~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~  259 (382)
T 2vx3_A          199 AIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS  259 (382)
T ss_dssp             CEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cEEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            58999999985310000 00111 2456664   246889999999999999988877643

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.47  E-value=4.7e-15  Score=95.89  Aligned_cols=107  Identities=12%  Similarity=0.020  Sum_probs=65.4

Q ss_pred             eeecCCCCCCHHHHHHH-HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC-
Q psy12612          2 RVELSDLRILRDEIVES-VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL-   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~-   72 (116)
                      ++||+|||++....... ...|. .+.+||.   ..++.++||||||+++|++..+..|...   .+....+....... 
T Consensus       180 ~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p  259 (355)
T 2eu9_A          180 SIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIP  259 (355)
T ss_dssp             CEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             cEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCc
Confidence            58999999985311000 00111 2456664   3468899999999999999888776432   12222211110000 


Q ss_pred             -------------------------------------CC-CCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 -------------------------------------RP-SLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 -------------------------------------~p-~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                                           .. .......+.++.+|+.+||..||.+||++.+++.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          260 SHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             HHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                                                 00 0001134568899999999999999999999863

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.47  E-value=6.1e-15  Score=95.39  Aligned_cols=106  Identities=16%  Similarity=0.124  Sum_probs=69.9

Q ss_pred             eeecCCCCCCHHHHHHHH--hcC-CCCCCCCcC----cccC-HHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCC
Q psy12612          2 RVELSDLRILRDEIVESV--RKG-EKCLRPNLS----ELTC-EEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g-~~~~~p~~~----~~~~-~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~   69 (116)
                      ++||+|||++........  ..| ..+.+||..    .++. ++||||||+++|++..+..|...    .++...+..+.
T Consensus       190 ~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~  269 (348)
T 2pml_X          190 RVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKN  269 (348)
T ss_dssp             CEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCC
T ss_pred             cEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccC
Confidence            589999999853100000  011 135567752    2344 89999999999998887766432    35556665543


Q ss_pred             CCCCCCC---------------CccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 KCLRPSL---------------SELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~~~~p~~---------------~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .. .|.-               ....++.++.+|+.+||..||.+||++.+++.
T Consensus       270 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          270 IE-YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             CC-CCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cC-CccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            21 1100               00257889999999999999999999999865

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.47  E-value=1e-15  Score=101.63  Aligned_cols=100  Identities=10%  Similarity=-0.051  Sum_probs=64.1

Q ss_pred             eeecCCCCCCHHHHHH-HHhcCCCCCCCCcC-------------cccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVE-SVRKGEKCLRPNLS-------------ELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~~~g~~~~~p~~~-------------~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ++||+|||+++..-.. ....|..+.+||..             .++.++||||||+++|++..+..|............
T Consensus       249 ~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~  328 (413)
T 3dzo_A          249 GVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEW  328 (413)
T ss_dssp             CEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGG
T ss_pred             eEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHH
Confidence            5899999997531100 00112345566642             256699999999999999988877553111000000


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                      .. ...+     .++.++.+||.+||..||++||++.+++
T Consensus       329 ~~-~~~~-----~~~~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          329 IF-RSCK-----NIPQPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             GG-SSCC-----CCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             HH-hhcc-----cCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            00 0111     5778999999999999999999966553

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.47  E-value=9.5e-15  Score=96.29  Aligned_cols=101  Identities=17%  Similarity=0.273  Sum_probs=68.5

Q ss_pred             eeecCCCCCCHHHHHHH---HhcCC-CCCCCCcC------cccCHHHHHHHHHHhcccCCCCCCCCh------HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVES---VRKGE-KCLRPNLS------ELTCEEEVTAIMKRCWNEDPSERPDFT------TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g~-~~~~p~~~------~~~~~~dv~s~g~~~we~~~~~~p~~~------~~~~~~l   65 (116)
                      ++||+|||++..-....   ...|. .+.+||+.      .++.++|+||||+++|++..+..|...      .++...+
T Consensus       153 ~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~  232 (384)
T 4fr4_A          153 HVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF  232 (384)
T ss_dssp             CEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH
T ss_pred             CEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH
Confidence            68999999985210000   00121 35677752      267899999999999999888777531      2344444


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCC-HHHHH
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPD-FTTLK  107 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~-~~~i~  107 (116)
                      .... ...|.    .++.++.+|+.+||..||.+||+ +.+|.
T Consensus       233 ~~~~-~~~p~----~~s~~~~~li~~lL~~dP~~R~s~~~~l~  270 (384)
T 4fr4_A          233 ETTV-VTYPS----AWSQEMVSLLKKLLEPNPDQRFSQLSDVQ  270 (384)
T ss_dssp             HHCC-CCCCT----TSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred             hhcc-cCCCC----cCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence            4333 22233    68899999999999999999998 66664

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.47  E-value=7.1e-15  Score=93.24  Aligned_cols=105  Identities=13%  Similarity=0.106  Sum_probs=69.0

Q ss_pred             eeecCCCCCCHHHHHHH-H--hcC-CCCCCCCc---------CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVES-V--RKG-EKCLRPNL---------SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~--~~g-~~~~~p~~---------~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||++....... .  ..| ..+.+||.         ..++.++||||||+++|++..+..|...   ......+
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~  241 (298)
T 1phk_A          162 NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI  241 (298)
T ss_dssp             CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             cEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHH
Confidence            58999999874210000 0  001 12345553         1357799999999999999888777532   2444445


Q ss_pred             hcCCCC-CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKC-LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~-~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+... ..+.  ...++.++.+++.+||..||.+||++.+++.
T Consensus       242 ~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          242 MSGNYQFGSPE--WDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HHTCCCCCTTT--GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             hcCCcccCccc--ccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            444332 1121  1257889999999999999999999999864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.47  E-value=7.8e-15  Score=97.06  Aligned_cols=97  Identities=13%  Similarity=0.206  Sum_probs=65.3

Q ss_pred             eeecCCCCCCHHHHHHHH----hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------------HHH
Q psy12612          2 RVELSDLRILRDEIVESV----RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------------TEI   61 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------------~~~   61 (116)
                      ++||+|||+++.......    ..| ..+.+||+   ..++.++|+||+|+++|++..+..|...            ..+
T Consensus       191 ~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~  270 (396)
T 4dc2_A          191 HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL  270 (396)
T ss_dssp             CEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHH
T ss_pred             CEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHH
Confidence            689999999863110000    011 13556665   3478899999999999999888777521            123


Q ss_pred             HHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         62 VESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        62 ~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                      ...+..+. ...|.    .++.++.+|+.+||..||.+||+.
T Consensus       271 ~~~i~~~~-~~~p~----~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          271 FQVILEKQ-IRIPR----SLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             HHHHHHCC-CCCCT----TSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             HHHHhccc-cCCCC----cCCHHHHHHHHHHhcCCHhHcCCC
Confidence            33443332 22333    578899999999999999999984

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.46  E-value=8.6e-15  Score=93.50  Aligned_cols=99  Identities=17%  Similarity=0.172  Sum_probs=65.7

Q ss_pred             eeecCCCCCCHHHHHHHH--hcC-CCCCCCCc---Ccc-cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCCC
Q psy12612          2 RVELSDLRILRDEIVESV--RKG-EKCLRPNL---SEL-TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRP   74 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g-~~~~~p~~---~~~-~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~p   74 (116)
                      ++||+|||++........  ..| ..+.+||.   ..+ +.++||||||+++|++..+..|....  ..... .. ...+
T Consensus       178 ~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~-~~-~~~~  253 (312)
T 2iwi_A          178 CAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD--QEILE-AE-LHFP  253 (312)
T ss_dssp             EEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH--HHHHH-TC-CCCC
T ss_pred             eEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh--HHHhh-hc-cCCc
Confidence            589999999752100000  011 12455664   122 34799999999999999887775431  12222 21 1122


Q ss_pred             CCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         75 SLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        75 ~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .    .++.++.+++.+||..+|++||++.+++.
T Consensus       254 ~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          254 A----HVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             T----TSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             c----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            2    57889999999999999999999999975

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.46  E-value=1.4e-15  Score=98.99  Aligned_cols=101  Identities=12%  Similarity=0.263  Sum_probs=69.9

Q ss_pred             eeecCCCCCCHHHHHHHH----hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESV----RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++.......    ..|. .+.+||.   ..++.++|+||+|+++|++..+..|...   .++...+..+..
T Consensus       156 ~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~  235 (345)
T 1xjd_A          156 HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP  235 (345)
T ss_dssp             CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             CEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCC
Confidence            689999999853110000    0111 2456664   3468899999999999999888777543   355555555432


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHH-HHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFT-TLK  107 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~-~i~  107 (116)
                      . .|.    .++.++.+|+.+||..||.+||++. +|.
T Consensus       236 ~-~p~----~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          236 F-YPR----WLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             C-CCT----TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             C-CCc----ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            2 232    5788999999999999999999986 553

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.46  E-value=1.1e-14  Score=94.92  Aligned_cols=97  Identities=16%  Similarity=0.239  Sum_probs=67.2

Q ss_pred             eeecCCCCCCHHHHHHHH----hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESV----RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++........    ..|. .+.+||+   ..++.++|+||||+++||+..+..|...   .++...+..+..
T Consensus       159 ~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~  238 (353)
T 2i0e_A          159 HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV  238 (353)
T ss_dssp             CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             cEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Confidence            689999999863110000    0111 2556664   3468899999999999999888777543   355555555432


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                      . .|.    .++.++.+|+.+||..||.+||++
T Consensus       239 ~-~p~----~~s~~~~~li~~lL~~dP~~R~~~  266 (353)
T 2i0e_A          239 A-YPK----SMSKEAVAICKGLMTKHPGKRLGC  266 (353)
T ss_dssp             C-CCT----TSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred             C-CCC----CCCHHHHHHHHHHhhcCHHHcCCC
Confidence            2 232    688999999999999999999964

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.46  E-value=3.9e-15  Score=95.53  Aligned_cols=107  Identities=9%  Similarity=0.050  Sum_probs=66.4

Q ss_pred             eeecCCCCCCHHHHHH--HH--hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc--
Q psy12612          2 RVELSDLRILRDEIVE--SV--RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK--   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~--~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~--   67 (116)
                      ++||+|||++......  ..  ..| ..+.+||.    ..++.++||||||+++|++..+..|...   .+....+..  
T Consensus       146 ~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  225 (317)
T 2pmi_A          146 QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIM  225 (317)
T ss_dssp             CEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             CEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence            6899999998531000  00  011 13556764    2368899999999999999888766432   122222211  


Q ss_pred             CCC--CC----------CCCC---------------CccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEK--CL----------RPSL---------------SELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~--~~----------~p~~---------------~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +..  ..          .+.+               ....++.++.+++.+||..||.+||++.+++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          226 GTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             CSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            100  00          0000               00146678999999999999999999999864

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.46  E-value=1.2e-13  Score=89.69  Aligned_cols=107  Identities=7%  Similarity=-0.005  Sum_probs=66.9

Q ss_pred             eeecCCCCCCHHHHHHHH-hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc-----
Q psy12612          2 RVELSDLRILRDEIVESV-RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK-----   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~-----   67 (116)
                      ++||+|||++........ ..| ..+.+||.    ..++.++||||+|+++|++..+..|...   .+.+..+..     
T Consensus       164 ~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~  243 (353)
T 3coi_A          164 ELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP  243 (353)
T ss_dssp             CEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBC
T ss_pred             cEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            689999999863211111 112 23566764    3467889999999999999888776432   112211111     


Q ss_pred             -------------------CCCCCCCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 -------------------GEKCLRPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 -------------------~~~~~~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                         .....++.+.  ...++.++.+|+.+||..||.+||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          244 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             CHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                               0001111111  0257789999999999999999999999864

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.46  E-value=6.4e-14  Score=91.69  Aligned_cols=107  Identities=8%  Similarity=0.025  Sum_probs=65.3

Q ss_pred             eeecCCCCCCHHHHHHHH-hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc--CC-
Q psy12612          2 RVELSDLRILRDEIVESV-RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK--GE-   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~--~~-   69 (116)
                      ++||+|||++........ ..| ..+.+||.    ..++.++||||||+++|++..+..|...   .+....+..  +. 
T Consensus       182 ~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~  261 (371)
T 4exu_A          182 ELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP  261 (371)
T ss_dssp             CEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             CEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence            689999999964221111 112 23556764    3468899999999999999887776432   122211111  00 


Q ss_pred             ---------------------CCCCCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 ---------------------KCLRPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ---------------------~~~~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                           ......+.  ...+++++.+|+.+||..||.+||++.+++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          262 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             CHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             cHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence                                 00000000  0146788999999999999999999999864

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.45  E-value=1.7e-14  Score=92.05  Aligned_cols=107  Identities=10%  Similarity=-0.036  Sum_probs=66.3

Q ss_pred             eeecCCCCCCHHHHH--HHHh-----cC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV--ESVR-----KG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~-----~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||++.....  ....     .+ ..+.+|+.    ..++.++||||||+++|++..+..|...   .+....+.
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~  238 (320)
T 2i6l_A          159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL  238 (320)
T ss_dssp             EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            689999999852110  0000     11 12456663    3467889999999999999887776432   12222221


Q ss_pred             cCCC---------------------CCCCCCC----ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEK---------------------CLRPSLS----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~---------------------~~~p~~~----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ....                     ...+..+    ...++.++.+++.+||..||.+||++.+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            1110                     0001000    0147789999999999999999999999965

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.45  E-value=5.3e-15  Score=95.10  Aligned_cols=107  Identities=13%  Similarity=0.055  Sum_probs=66.1

Q ss_pred             eeecCCCCCCHHHHHH---HHhcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----H-H--------
Q psy12612          2 RVELSDLRILRDEIVE---SVRKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----T-E--------   60 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~-~--------   60 (116)
                      ++||+|||++......   ....|. .+.+||.    ..++.++||||+|+++|++..+..|.+.    . .        
T Consensus       169 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~  248 (330)
T 3nsz_A          169 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL  248 (330)
T ss_dssp             EEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHH
T ss_pred             EEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhc
Confidence            6899999998521000   000111 2445654    2368899999999999999888777632    0 1        


Q ss_pred             ----HHHHHhcCCCCCCCC-------------------CCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         61 ----IVESVRKGEKCLRPS-------------------LSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        61 ----~~~~l~~~~~~~~p~-------------------~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                          +...+........|.                   .....++.++.+|+.+||..||.+|||+.+++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          249 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             CHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                111111111100000                   001136789999999999999999999999875

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.45  E-value=3.3e-15  Score=97.07  Aligned_cols=107  Identities=10%  Similarity=-0.033  Sum_probs=66.0

Q ss_pred             eeecCCCCCCHHHHHHH---HhcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES---VRKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||++.......   ...| ..+.+||.    ..++.++||||||+++|++..+..|...   ......+.....
T Consensus       170 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  249 (360)
T 3e3p_A          170 TLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG  249 (360)
T ss_dssp             EEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             cEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcC
Confidence            68999999985211000   0011 12456664    2368899999999999999888776432   122222211000


Q ss_pred             -CC------------------CCCCC--------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 -CL------------------RPSLS--------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 -~~------------------~p~~~--------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       +.                  ....+        ....+.++.+|+.+||..||.+||++.+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence             00                  00000        0125788999999999999999999999864

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.45  E-value=9.2e-15  Score=96.00  Aligned_cols=107  Identities=14%  Similarity=0.042  Sum_probs=66.4

Q ss_pred             eeecCCCCCCHHHHHHHH---hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---H-HHHHHHhc-C
Q psy12612          2 RVELSDLRILRDEIVESV---RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---T-EIVESVRK-G   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~-~~~~~l~~-~   68 (116)
                      ++||+|||++..-.....   ..| ..+.+||.    ..++.++||||+|+++|++..+..|...   . .+...+.. |
T Consensus       180 ~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g  259 (383)
T 3eb0_A          180 TLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMG  259 (383)
T ss_dssp             EEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             cEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence            689999999852100000   011 12556764    2378899999999999999887766432   1 22221111 0


Q ss_pred             C-------------C-CCCCCCC--------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 E-------------K-CLRPSLS--------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~-------------~-~~~p~~~--------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .             . ...|.+.        +..++.++.+|+.+||..||.+|||+.+++.
T Consensus       260 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          260 TPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             CCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            0             0 0011110        1146788999999999999999999999864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.45  E-value=6.3e-15  Score=95.61  Aligned_cols=107  Identities=10%  Similarity=0.015  Sum_probs=64.7

Q ss_pred             eeecCCCCCCHHHHH------HHH--hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIV------ESV--RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~------~~~--~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||++..-..      ...  ..| ..+.+||.    ..++.++||||||+++|++..+..|...   ......+
T Consensus       162 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  241 (351)
T 3mi9_A          162 VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI  241 (351)
T ss_dssp             CEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             CEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            589999999842100      000  001 12456663    2368899999999999999887766432   1222222


Q ss_pred             hcCCCCCCCCC-Ccc--------------------------chHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPSL-SEL--------------------------TCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~~-~~~--------------------------~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ........+.. +..                          ..++++.+|+.+||..||.+||++.+++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          242 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             HHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            22111111110 000                          01566889999999999999999999865

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.44  E-value=1.2e-14  Score=94.22  Aligned_cols=107  Identities=9%  Similarity=-0.003  Sum_probs=64.9

Q ss_pred             eeecCCCCCCHHHHHHH-H---hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc--
Q psy12612          2 RVELSDLRILRDEIVES-V---RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK--   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~---~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~--   67 (116)
                      ++||+|||++....... .   ..| ..+.+||.    ..++.++||||||+++|++..+..|...   .+.+..+..  
T Consensus       150 ~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~  229 (346)
T 1ua2_A          150 VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETL  229 (346)
T ss_dssp             CEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred             CEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHc
Confidence            68999999985310000 0   011 12456664    2367889999999999998876544321   122222211  


Q ss_pred             CC--CCCC---------------CCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GE--KCLR---------------PSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~--~~~~---------------p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +.  ....               |..+.    ..++.++.+|+.+||..||.+|||+.+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          230 GTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             CCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence            11  0000               11110    245688999999999999999999999864

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.44  E-value=4.3e-15  Score=97.40  Aligned_cols=106  Identities=9%  Similarity=0.011  Sum_probs=64.9

Q ss_pred             eeecCCCCCCHHHHHHH-HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---------HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVES-VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---------TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---------~~~~~~l~~   67 (116)
                      ++||+|||++....... ...|. .+.+||.   ..++.++||||||+++|++..+..|...         ......+..
T Consensus       234 ~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~  313 (397)
T 1wak_A          234 KVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIE  313 (397)
T ss_dssp             CEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHH
T ss_pred             ceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHH
Confidence            69999999985311000 00111 2456664   3468899999999999998887766421         111111110


Q ss_pred             --CCCC-------------------------CCC-----------CCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 --GEKC-------------------------LRP-----------SLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 --~~~~-------------------------~~p-----------~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        +..+                         ..|           .+ ....+.++.+|+.+||..||.+||++.+++.
T Consensus       314 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          314 LLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEW-SQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             HHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCC-CHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             hcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhccc-chhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence              1000                         000           00 0135677899999999999999999999874

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.44  E-value=5e-14  Score=91.67  Aligned_cols=106  Identities=8%  Similarity=0.016  Sum_probs=63.4

Q ss_pred             eeecCCCCCCHHHHHHHH---hcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc---
Q psy12612          2 RVELSDLRILRDEIVESV---RKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK---   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~---   67 (116)
                      ++||+|||++........   ..|. .+.+||.    ..++.++||||+|+++|++..+..|...   .+....+..   
T Consensus       172 ~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~  251 (362)
T 3pg1_A          172 DITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVG  251 (362)
T ss_dssp             CEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             CEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence            589999999963221111   1121 2456764    3468899999999999999887766432   122221111   


Q ss_pred             ---------------------CCCCCCCCCC----ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 ---------------------GEKCLRPSLS----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ---------------------~~~~~~p~~~----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                           ... ..+...    ....++.+.+|+.+||..||.+||++.+++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          252 TPKIEDVVMFSSPSARDYLRNSLS-NVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             CCCHHHHHHTSCHHHHHHTTTCCC-CCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCChHHhhhccchhhhHHHHhhcc-cCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence                                 000 001000    0145678999999999999999999999864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.43  E-value=9.3e-15  Score=95.02  Aligned_cols=97  Identities=13%  Similarity=0.217  Sum_probs=64.8

Q ss_pred             eeecCCCCCCHHHHHHH--H--hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------------HHH
Q psy12612          2 RVELSDLRILRDEIVES--V--RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------------TEI   61 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~--~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------------~~~   61 (116)
                      ++||+|||+++......  .  ..|. .+.+||.   ..++.++|+||+|+++|++..+..|...            ..+
T Consensus       148 ~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  227 (345)
T 3a8x_A          148 HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL  227 (345)
T ss_dssp             CEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH
T ss_pred             CEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH
Confidence            68999999986311000  0  0111 2456664   3468899999999999998887776521            123


Q ss_pred             HHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         62 VESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        62 ~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                      ...+..+. ...|.    .++.++.+|+.+||..||.+||+.
T Consensus       228 ~~~i~~~~-~~~p~----~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          228 FQVILEKQ-IRIPR----SLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             HHHHHHCC-CCCCT----TSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             HHHHHcCC-CCCCC----CCCHHHHHHHHHHhcCCHhHCCCC
Confidence            33343332 22232    578899999999999999999995

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.43  E-value=1.7e-14  Score=95.23  Aligned_cols=107  Identities=13%  Similarity=0.059  Sum_probs=66.4

Q ss_pred             eeecCCCCCCHHHHHHHH---hcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc-C
Q psy12612          2 RVELSDLRILRDEIVESV---RKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK-G   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~-~   68 (116)
                      ++||+|||+++.......   ..|. .+.+||.    ..++.++||||+|+++|++..+..|+..    .++...+.. |
T Consensus       180 ~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g  259 (394)
T 4e7w_A          180 VLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLG  259 (394)
T ss_dssp             EEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             cEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence            689999999853100000   0011 2556764    2478899999999999999888776432    112111110 0


Q ss_pred             C--------------CCCCCCCC--------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 E--------------KCLRPSLS--------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 ~--------------~~~~p~~~--------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .              ....|.+.        ...+++++.+|+.+||..||.+||++.+++.
T Consensus       260 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          260 TPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             CCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence            0              00001100        0136788999999999999999999999864

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.42  E-value=2.4e-14  Score=95.19  Aligned_cols=107  Identities=15%  Similarity=0.050  Sum_probs=66.7

Q ss_pred             eeecCCCCCCHHHHHHHH---hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc-C
Q psy12612          2 RVELSDLRILRDEIVESV---RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK-G   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~-~   68 (116)
                      .+||+|||+++.-.....   ..| ..+.+||+    ..++.++||||||+++||+..+..|+..    .++...+.. |
T Consensus       195 ~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg  274 (420)
T 1j1b_A          195 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG  274 (420)
T ss_dssp             EEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             eEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence            479999999852100000   011 13556774    2478899999999999999888766432    122222111 0


Q ss_pred             -------------CC-CCCCCCC--------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 -------------EK-CLRPSLS--------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 -------------~~-~~~p~~~--------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                   +. ...|.+.        ....+.++.+|+.+||..||.+||++.+++.
T Consensus       275 ~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          275 TPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             SCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence                         00 0111110        0145788999999999999999999999864

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.42  E-value=2.7e-14  Score=93.54  Aligned_cols=107  Identities=8%  Similarity=0.036  Sum_probs=61.0

Q ss_pred             eeecCCCCCCHHHHHHHH-hcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc--CCC
Q psy12612          2 RVELSDLRILRDEIVESV-RKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK--GEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~--~~~   70 (116)
                      ++||+|||+++....... ..|. .+.+||.    ..++.++||||+|+++|++..+..|...   .+.+..+..  |..
T Consensus       170 ~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p  249 (367)
T 2fst_X          170 ELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP  249 (367)
T ss_dssp             CEEECC---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSC
T ss_pred             CEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            689999999874221111 1122 3566764    3468899999999999999887766432   111211111  000


Q ss_pred             --------------------CCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 --------------------CLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 --------------------~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                          ...+....    ..+++++.+|+.+|+..||.+||++.+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          250 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             CHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence                                00111110    135678899999999999999999999864

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.40  E-value=3.9e-14  Score=91.76  Aligned_cols=107  Identities=10%  Similarity=-0.049  Sum_probs=64.7

Q ss_pred             eeecCCCCCCHHH----HHHHHh----------cCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---H
Q psy12612          2 RVELSDLRILRDE----IVESVR----------KGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---T   59 (116)
Q Consensus         2 ~vKi~Dfgls~~~----~~~~~~----------~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~   59 (116)
                      ++||+|||++...    ......          .|. .+.+||.    ..++.++||||||+++|++..+..|...   .
T Consensus       150 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  229 (353)
T 2b9h_A          150 DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR  229 (353)
T ss_dssp             CEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             cEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH
Confidence            5899999988421    000000          011 2456763    3467899999999999998877666432   1


Q ss_pred             HHHHHHhc--CCC-----------------------CCCCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         60 EIVESVRK--GEK-----------------------CLRPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        60 ~~~~~l~~--~~~-----------------------~~~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +....+..  +..                       .....+.  ...++.++.+|+.+||..||.+||++.+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             HHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            11111110  000                       0000000  0146788999999999999999999999865

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.39  E-value=2.1e-14  Score=93.67  Aligned_cols=107  Identities=7%  Similarity=0.023  Sum_probs=65.3

Q ss_pred             eeecCCCCCCHHHHHHHHh-------cCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVESVR-------KGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~-------~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||++.........       .|. .+.+||.    ..++.++||||+|+++|++..+..|...   .+....+.
T Consensus       166 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  245 (364)
T 3qyz_A          166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL  245 (364)
T ss_dssp             CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHH
T ss_pred             CEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHH
Confidence            5899999998521100000       111 2456664    2368899999999999998887766422   11111111


Q ss_pred             c--CC--------------------CCCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 K--GE--------------------KCLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~--~~--------------------~~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .  +.                    .......+.    ..++.++.+|+.+|+..||.+||++.+++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             HHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0  00                    000000100    146788999999999999999999999864

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.38  E-value=6.2e-14  Score=95.96  Aligned_cols=97  Identities=18%  Similarity=0.223  Sum_probs=66.5

Q ss_pred             eeecCCCCCCHHHHHHHH-h---cCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-------HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVESV-R---KGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-------TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-~---~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-------~~~~~~l~   66 (116)
                      ++||+|||++..-..... .   .|. .+.+||+   ..++.++|+||||+++||+..+..|+..       .++...+.
T Consensus       327 ~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~  406 (543)
T 3c4z_A          327 NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL  406 (543)
T ss_dssp             CEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHH
T ss_pred             CEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHh
Confidence            689999999853100000 0   122 3566765   3478899999999999999887777532       24444444


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDF  103 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~  103 (116)
                      .+.. ..|.    .++.++.+|+.+||..||.+||++
T Consensus       407 ~~~~-~~p~----~~s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          407 EQAV-TYPD----KFSPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             HCCC-CCCT----TSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred             hccc-CCCc----ccCHHHHHHHHHhccCCHhHCCCC
Confidence            4332 2232    688999999999999999999976

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.37  E-value=5.6e-14  Score=91.96  Aligned_cols=107  Identities=9%  Similarity=0.018  Sum_probs=66.8

Q ss_pred             eeecCCCCCCHHHHHHHH-hcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc--CC-
Q psy12612          2 RVELSDLRILRDEIVESV-RKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK--GE-   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~--~~-   69 (116)
                      ++||+|||+++....... ..|. .+.+||.    ..++.++||||+|+++|++..+..|...   .+.+..+..  |. 
T Consensus       166 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~  245 (367)
T 1cm8_A          166 ELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP  245 (367)
T ss_dssp             CEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred             CEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            689999999863100000 0011 2456764    3478899999999999999887766432   111111111  10 


Q ss_pred             ---------------------CCCCCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 ---------------------KCLRPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ---------------------~~~~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                           ......+.  ...+++++.+|+.+|+..||.+|||+.+++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          246 PAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             CHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence                                 00011111  0146788999999999999999999999865

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.36  E-value=4.5e-14  Score=93.77  Aligned_cols=105  Identities=10%  Similarity=0.094  Sum_probs=69.7

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcCC-CCCCCCcC-------cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVES-----VRKGE-KCLRPNLS-------ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g~-~~~~p~~~-------~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||++.......     ...|. .+.+||+.       .++.++|+||||+++|++..+..|...   .++...+
T Consensus       206 ~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i  285 (410)
T 3v8s_A          206 HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI  285 (410)
T ss_dssp             CEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred             CEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHH
Confidence            68999999985210000     00121 35667651       167899999999999999998887543   2344444


Q ss_pred             hcCCC-CCCCCCCccchHHHHHHHHHHhccCCCCC--CCCHHHHHH
Q psy12612         66 RKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSE--RPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~--Rp~~~~i~~  108 (116)
                      ..+.. ...|..  ..++.++.+|+.+|+..+|.+  ||++.+|..
T Consensus       286 ~~~~~~~~~p~~--~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          286 MNHKNSLTFPDD--NDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             HTHHHHCCCCTT--CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             HhccccccCCCc--ccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            43221 111210  157889999999999988888  999999864

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.34  E-value=8e-14  Score=95.94  Aligned_cols=102  Identities=16%  Similarity=0.178  Sum_probs=68.7

Q ss_pred             eeecCCCCCCHHHHHHHH---hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-------HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVESV---RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-------TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-------~~~~~~l~~   67 (116)
                      ++||+|||++........   ..|. .+.+||+   ..++.++|+||||+++|++..+..|...       .++...+..
T Consensus       324 ~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~  403 (576)
T 2acx_A          324 HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE  403 (576)
T ss_dssp             CEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH
T ss_pred             CeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc
Confidence            689999999852100000   0121 3566765   3478899999999999999887776432       234444443


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      ... ..|.    .++.++.+|+.+||..||.+||     ++.+|..
T Consensus       404 ~~~-~~p~----~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          404 VPE-EYSE----RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             CCC-CCCT----TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             ccc-cCCc----cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            322 1222    6889999999999999999999     6677753

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.33  E-value=3.5e-14  Score=94.35  Aligned_cols=105  Identities=15%  Similarity=0.156  Sum_probs=67.5

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcCC-CCCCCCcC----------cccCHHHHHHHHHHhcccCCCCCCCCh---HHHH
Q psy12612          2 RVELSDLRILRDEIVES-----VRKGE-KCLRPNLS----------ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIV   62 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g~-~~~~p~~~----------~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~   62 (116)
                      ++||+|||++.......     ...|. .+.+||+.          .|+.++|+||||+++||+..+..|...   .++.
T Consensus       200 ~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~  279 (412)
T 2vd5_A          200 HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETY  279 (412)
T ss_dssp             CEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH
T ss_pred             CEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHH
Confidence            68999999985211000     00122 35667742          368899999999999999988877543   2344


Q ss_pred             HHHhcCC-CCCCCCCCccchHHHHHHHHHHhccCCCCCC---CCHHHHHH
Q psy12612         63 ESVRKGE-KCLRPSLSELTCEEEVTAIMKRCWNEDPSER---PDFTTLKA  108 (116)
Q Consensus        63 ~~l~~~~-~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~R---p~~~~i~~  108 (116)
                      ..+.... ....|.+. ..++.++.+||.+||. +|.+|   |++.+|..
T Consensus       280 ~~i~~~~~~~~~p~~~-~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          280 GKIVHYKEHLSLPLVD-EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             HHHHTHHHHCCCC-----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             HHHHhcccCcCCCccc-cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            4443321 12222211 2588999999999998 99998   58888753

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.32  E-value=6.1e-14  Score=91.49  Aligned_cols=107  Identities=10%  Similarity=0.024  Sum_probs=68.5

Q ss_pred             eeecCCCCCCHHHH-H--HHH---hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEI-V--ESV---RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~-~--~~~---~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~   71 (116)
                      ++||+|||++..-. .  ...   ..| ..+.+||.   ..++.++||||||+++|++..+..|... .... .......
T Consensus       221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~-~~~~-~~~~~~~  298 (365)
T 3e7e_A          221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK-NEGG-ECKPEGL  298 (365)
T ss_dssp             TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE-EETT-EEEECSC
T ss_pred             CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc-CCCC-ceeechh
Confidence            58999999995210 0  000   012 23567775   3478999999999999999998888653 1000 0000011


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHhh
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSER-PDFTTLKAAIRKLN  114 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~R-p~~~~i~~~l~~~~  114 (116)
                      .+..    ..++.+.+++..|++.+|.+| |++.++...|+.+.
T Consensus       299 ~~~~----~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l  338 (365)
T 3e7e_A          299 FRRL----PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF  338 (365)
T ss_dssp             CTTC----SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred             cccc----CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence            1111    356778899999999999998 56788877776653

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.31  E-value=5.7e-13  Score=87.57  Aligned_cols=107  Identities=20%  Similarity=0.229  Sum_probs=62.4

Q ss_pred             eeecCCCCCCHHHHHH----HH-------hcC-CCCCCCCc-----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHH
Q psy12612          2 RVELSDLRILRDEIVE----SV-------RKG-EKCLRPNL-----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEI   61 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~~-------~~g-~~~~~p~~-----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~   61 (116)
                      ++||+|||++......    ..       ..| ..+.+||.     ..++.++||||+|+++|++..+..|...   .+.
T Consensus       166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  245 (389)
T 3gni_B          166 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM  245 (389)
T ss_dssp             CEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH
T ss_pred             CEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence            6899999986321000    00       001 12456664     2468899999999999998887766432   011


Q ss_pred             HHHHhcCCCC----------------------------------------CCCCCC-ccchHHHHHHHHHHhccCCCCCC
Q psy12612         62 VESVRKGEKC----------------------------------------LRPSLS-ELTCEEEVTAIMKRCWNEDPSER  100 (116)
Q Consensus        62 ~~~l~~~~~~----------------------------------------~~p~~~-~~~~~~~l~~l~~~Cw~~~p~~R  100 (116)
                      ...+..+...                                        ..+..+ ...++.++.+|+.+||..||.+|
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  325 (389)
T 3gni_B          246 LLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDAR  325 (389)
T ss_dssp             HHHC--------------------------------------------------------CCHHHHHHHHHHTCSCTTTS
T ss_pred             HHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccC
Confidence            1111110000                                        000000 11466789999999999999999


Q ss_pred             CCHHHHHH
Q psy12612        101 PDFTTLKA  108 (116)
Q Consensus       101 p~~~~i~~  108 (116)
                      |++.+++.
T Consensus       326 pta~ell~  333 (389)
T 3gni_B          326 PSASTLLN  333 (389)
T ss_dssp             CCHHHHTT
T ss_pred             CCHHHHhc
Confidence            99999864

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.29  E-value=3.3e-13  Score=94.24  Aligned_cols=105  Identities=12%  Similarity=0.049  Sum_probs=62.3

Q ss_pred             eeecCCCCCCHHHHHHHH---hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH-HHHH----------
Q psy12612          2 RVELSDLRILRDEIVESV---RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT-EIVE----------   63 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~-~~~~----------   63 (116)
                      .+||+|||++........   ..| ..+.+||.   ..++.++||||||+++|++..+..|.... ....          
T Consensus       162 ~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~  241 (676)
T 3qa8_A          162 IHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSN  241 (676)
T ss_dssp             EEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC----
T ss_pred             eEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccc
Confidence            489999999853110000   011 23567775   34688999999999999999988876421 0000          


Q ss_pred             -HH-----hcCCC-----CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHH
Q psy12612         64 -SV-----RKGEK-----CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL  106 (116)
Q Consensus        64 -~l-----~~~~~-----~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i  106 (116)
                       ..     ..+..     ...|.--....+..+.+++..||..||.+||++.++
T Consensus       242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence             00     00100     111111112478899999999999999999998763

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.28  E-value=1.8e-13  Score=91.56  Aligned_cols=106  Identities=11%  Similarity=0.153  Sum_probs=69.0

Q ss_pred             eeecCCCCCCHHHHHHHH-----hcCC-CCCCCCcC--------cccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHH
Q psy12612          2 RVELSDLRILRDEIVESV-----RKGE-KCLRPNLS--------ELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVES   64 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-----~~g~-~~~~p~~~--------~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~   64 (116)
                      ++||+|||+++.......     ..|. .+.+||+.        .++.++||||||+++||+..+..|...   .+....
T Consensus       213 ~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~  292 (437)
T 4aw2_A          213 HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK  292 (437)
T ss_dssp             CEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred             CEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHh
Confidence            689999999852110000     0122 35677742        368899999999999999988887543   234444


Q ss_pred             HhcCC-CCCCCCCCccchHHHHHHHHHHhccCCCCC--CCCHHHHHH
Q psy12612         65 VRKGE-KCLRPSLSELTCEEEVTAIMKRCWNEDPSE--RPDFTTLKA  108 (116)
Q Consensus        65 l~~~~-~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~--Rp~~~~i~~  108 (116)
                      +.... +...|... ..+++++.+|+.+|+..+|++  ||++.+|+.
T Consensus       293 i~~~~~~~~~p~~~-~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          293 IMNHKERFQFPTQV-TDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             HHTHHHHCCCCSSC-CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             hhhccccccCCccc-ccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            43321 12222211 157889999999998777777  999998864

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.23  E-value=1.1e-12  Score=91.90  Aligned_cols=103  Identities=13%  Similarity=0.101  Sum_probs=63.3

Q ss_pred             eeecCCCCCCHHHHHHHHhcC-CCCCCCCc--CcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCCCCCCc
Q psy12612          2 RVELSDLRILRDEIVESVRKG-EKCLRPNL--SELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPSLSE   78 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g-~~~~~p~~--~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~p~~~~   78 (116)
                      ++||+|||++..........| ..+.+||.  ..++.++||||||+++|++..+..|... .    ...+.   ....+.
T Consensus       219 ~~kl~DFG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~-~----~~~~~---~~~~~~  290 (681)
T 2pzi_A          219 QLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNG-R----YVDGL---PEDDPV  290 (681)
T ss_dssp             CEEECCCTTCEETTCCSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETT-E----ECSSC---CTTCHH
T ss_pred             cEEEEecccchhcccCCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcc-c----ccccc---cccccc
Confidence            589999999853110000112 24667875  2247789999999999998776444321 1    00111   011111


Q ss_pred             cchHHHHHHHHHHhccCCCCCCCC-HHHHHHHHHH
Q psy12612         79 LTCEEEVTAIMKRCWNEDPSERPD-FTTLKAAIRK  112 (116)
Q Consensus        79 ~~~~~~l~~l~~~Cw~~~p~~Rp~-~~~i~~~l~~  112 (116)
                      ...+..+.+|+.+||..||.+||+ ..++...+..
T Consensus       291 ~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          291 LKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             HHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             cccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            134578899999999999999996 4555555544

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.17  E-value=6.3e-12  Score=79.75  Aligned_cols=81  Identities=11%  Similarity=0.062  Sum_probs=55.3

Q ss_pred             ccCHHHHHHHHHHhcccCCCCCCCChHHHHHHH----hcCCCCCCC-CCCccchHHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         33 LTCEEEVTAIMKRCWNEDPSERPDFTTEIVESV----RKGEKCLRP-SLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        33 ~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l----~~~~~~~~p-~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                      ++.++||||||+++|++.++..|+........+    ........+ .-....++.++.+++.+||+.||.+| |+.+++
T Consensus       179 ~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~  257 (286)
T 3uqc_A          179 ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLL  257 (286)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHH
Confidence            388999999999999998887764421000001    100111110 00012588899999999999999999 999999


Q ss_pred             HHHHHhh
Q psy12612        108 AAIRKLN  114 (116)
Q Consensus       108 ~~l~~~~  114 (116)
                      ..|+.+.
T Consensus       258 ~~L~~~~  264 (286)
T 3uqc_A          258 NLMQQAT  264 (286)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9998764

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.95  E-value=5.5e-10  Score=72.04  Aligned_cols=100  Identities=13%  Similarity=0.073  Sum_probs=59.0

Q ss_pred             eeecCCCCCCHHHHHHHHhcCC-CCCCCCc--CcccCHHHHHHHHHH-hcccCCCCCCCCh----HHHHHHHhcCCC-CC
Q psy12612          2 RVELSDLRILRDEIVESVRKGE-KCLRPNL--SELTCEEEVTAIMKR-CWNEDPSERPDFT----TEIVESVRKGEK-CL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g~-~~~~p~~--~~~~~~~dv~s~g~~-~we~~~~~~p~~~----~~~~~~l~~~~~-~~   72 (116)
                      ++||+|||+++... .....|. .+.+||+  ...+.++||||++.. .++..++..|...    ..+...+..... ..
T Consensus       220 ~vkL~DFG~a~~~~-~~~~~gt~~y~aPE~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  298 (336)
T 2vuw_A          220 QVSIIDYTLSRLER-DGIVVFCDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT  298 (336)
T ss_dssp             EEEECCCTTCBEEE-TTEEECCCCTTCSGGGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS
T ss_pred             eEEEeeccccEecC-CCcEEEeecccChhhhcCCCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCc
Confidence            79999999996311 0111233 4678886  234678999998777 5666666555322    112223332211 11


Q ss_pred             CCCCC-ccchHHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         73 RPSLS-ELTCEEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        73 ~p~~~-~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                      .+..+ ...+++++.+|+.+|+..|     |..+++
T Consensus       299 ~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          299 KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             ccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence            11111 1257889999999999866     787776

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=97.71  E-value=6.9e-05  Score=48.12  Aligned_cols=54  Identities=35%  Similarity=0.648  Sum_probs=44.8

Q ss_pred             CCCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612          9 RILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus         9 gls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      |++..++...+..|.++..|.    .++.+++.++..||+.+|.+||+|. ++...++.
T Consensus       250 ~~~~~~~~~~i~~~~~~~~p~----~~~~~~~~li~~C~~~dP~~RPs~~-ei~~~L~a  303 (308)
T 4gt4_A          250 GYSNQDVVEMIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFK-DIHSRLRA  303 (308)
T ss_dssp             TCCHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHT
T ss_pred             CCCHHHHHHHHHcCCCCCCcc----cchHHHHHHHHHHcCCChhHCcCHH-HHHHHHHh
Confidence            455666777777777776777    8899999999999999999999996 88888765

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=97.48  E-value=0.00031  Score=45.53  Aligned_cols=54  Identities=26%  Similarity=0.688  Sum_probs=44.4

Q ss_pred             CCCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612          9 RILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus         9 gls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      +++..++...+..|.++..|.    .++.+++.++..||+.+|.+||++. ++...++.
T Consensus       263 ~~~~~~~~~~i~~g~~~~~p~----~~~~~~~~li~~cl~~dP~~RPs~~-ei~~~L~~  316 (329)
T 4aoj_A          263 QLSNTEAIDCITQGRELERPR----ACPPEVYAIMRGCWQREPQQRHSIK-DVHARLQA  316 (329)
T ss_dssp             SSCHHHHHHHHHHTCCCCCCT----TCCHHHHHHHHHHCCSSTTTSCCHH-HHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCCCCcc----cccHHHHHHHHHHcCcChhHCcCHH-HHHHHHHH
Confidence            566677777777888777777    8889999999999999999999996 77766654

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=97.34  E-value=0.00036  Score=44.62  Aligned_cols=54  Identities=28%  Similarity=0.661  Sum_probs=43.7

Q ss_pred             CCCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612          9 RILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus         9 gls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      |++..++...+..|.++..|.    .++.+++.++..||+.+|.+||++. ++...+++
T Consensus       233 ~~~~~~~~~~i~~~~~~~~p~----~~~~~~~~li~~cl~~dP~~RPs~~-~i~~~L~~  286 (299)
T 4asz_A          233 QLSNNEVIECITQGRVLQRPR----TCPQEVYELMLGCWQREPHMRKNIK-GIHTLLQN  286 (299)
T ss_dssp             TSCHHHHHHHHHHTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCCCCCc----cchHHHHHHHHHHcCCChhHCcCHH-HHHHHHHH
Confidence            466677777787888777777    8889999999999999999999996 66655543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=96.81  E-value=0.0016  Score=42.56  Aligned_cols=48  Identities=31%  Similarity=0.711  Sum_probs=38.3

Q ss_pred             HHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         14 EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        14 ~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .+...+..|.++..|.    .++.+++.++..||+.+|.+||++. +++..+.
T Consensus       296 ~~~~~i~~g~~~~~p~----~~~~~~~~li~~c~~~dP~~RPt~~-eil~~L~  343 (353)
T 4ase_A          296 EFCRRLKEGTRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTFS-ELVEHLG  343 (353)
T ss_dssp             HHHHHHHHTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             HHHHHHHcCCCCCCCc----cCCHHHHHHHHHHcCcChhHCcCHH-HHHHHHH
Confidence            3455666777777776    7889999999999999999999996 7776654

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=96.06  E-value=0.00011  Score=50.85  Aligned_cols=49  Identities=10%  Similarity=-0.023  Sum_probs=16.1

Q ss_pred             eeecCCCCCCHHHH------HHHHhcCCCCCCCCc--CcccCHHHHHHHHHHhcccCC
Q psy12612          2 RVELSDLRILRDEI------VESVRKGEKCLRPNL--SELTCEEEVTAIMKRCWNEDP   51 (116)
Q Consensus         2 ~vKi~Dfgls~~~~------~~~~~~g~~~~~p~~--~~~~~~~dv~s~g~~~we~~~   51 (116)
                      +|||+|||+++...      ...+.+ ..+++||.  ..+...+|+|++|+..+++..
T Consensus       377 ~vKL~DFGlAr~~~~~~~~~~t~vGT-p~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~  433 (569)
T 4azs_A          377 HARLIDFGSIVTTPQDCSWPTNLVQS-FFVFVNELFAENKSWNGFWRSAPVHPFNLPQ  433 (569)
T ss_dssp             CEEECCCTTEESCC---CCSHHHHHH-HHHHHHHHC-----------------CCCCT
T ss_pred             CEEEeecccCeeCCCCCccccCceec-hhhccHHHhCCCCCCcccccccccchhhhcc
Confidence            69999999875210      011111 11233443  123556899999988777543

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=95.96  E-value=0.015  Score=39.07  Aligned_cols=55  Identities=33%  Similarity=0.688  Sum_probs=43.1

Q ss_pred             CCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCC
Q psy12612         10 ILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGE   69 (116)
Q Consensus        10 ls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~   69 (116)
                      ++..++...+..+.++..|.    .++.+++.+...||..+|.+||++. ++...+..-.
T Consensus       389 ~~~~~~~~~i~~~~~~~~~~----~~~~~l~~li~~cl~~dp~~RPt~~-~i~~~L~~~~  443 (454)
T 1qcf_A          389 MSNPEVIRALERGYRMPRPE----NCPEELYNIMMRCWKNRPEERPTFE-YIQSVLDDFY  443 (454)
T ss_dssp             CCHHHHHHHHHHTCCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHTSS
T ss_pred             CCHHHHHHHHHcCCCCCCCC----CCCHHHHHHHHHHccCChhHCcCHH-HHHHHHHHHH
Confidence            44555666666677666666    7889999999999999999999996 8888777644

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=95.89  E-value=0.016  Score=37.89  Aligned_cols=52  Identities=29%  Similarity=0.686  Sum_probs=38.4

Q ss_pred             CCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         10 ILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        10 ls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ++..++...+..+.++..|.    .++.+++.+...||..+|.+||++. ++...+.
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~Rps~~-~i~~~L~  370 (377)
T 3cbl_A          319 LSNQQTREFVEKGGRLPCPE----LCPDAVFRLMEQCWAYEPGQRPSFS-TIYQELQ  370 (377)
T ss_dssp             SCHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCCCCC----CCCHHHHHHHHHHcCCCchhCcCHH-HHHHHHH
Confidence            34444555556666655565    6788999999999999999999986 6666554

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=95.84  E-value=0.03  Score=37.53  Aligned_cols=56  Identities=25%  Similarity=0.614  Sum_probs=42.5

Q ss_pred             CCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCC
Q psy12612         10 ILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEK   70 (116)
Q Consensus        10 ls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~   70 (116)
                      ++..++...+..+.++..|.    .++.+++.+...||..+|.+||++. ++...+..-..
T Consensus       385 ~~~~~~~~~i~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~Rpt~~-~l~~~L~~~~~  440 (452)
T 1fmk_A          385 MVNREVLDQVERGYRMPCPP----ECPESLHDLMCQCWRKEPEERPTFE-YLQAFLEDYFT  440 (452)
T ss_dssp             CCHHHHHHHHHTTCCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHTTTS
T ss_pred             CCHHHHHHHHHcCCCCCCCC----CCCHHHHHHHHHHccCChhhCcCHH-HHHHHHHHHhc
Confidence            44455556666666665565    7788999999999999999999996 88887776544

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=95.53  E-value=0.044  Score=37.26  Aligned_cols=50  Identities=34%  Similarity=0.685  Sum_probs=38.2

Q ss_pred             HHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCC
Q psy12612         15 IVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGE   69 (116)
Q Consensus        15 ~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~   69 (116)
                      +...+..+.++..|.    .++.+++.+...||..+|.+||++. ++...+....
T Consensus       428 ~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~-el~~~L~~~~  477 (495)
T 1opk_A          428 VYELLEKDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFA-EIHQAFETMF  477 (495)
T ss_dssp             HHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHTSC
T ss_pred             HHHHHHcCCCCCCCC----CCCHHHHHHHHHHcCcChhHCcCHH-HHHHHHHHHH
Confidence            344444555555555    7788999999999999999999996 8888887644

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=95.47  E-value=0.014  Score=39.10  Aligned_cols=48  Identities=35%  Similarity=0.729  Sum_probs=36.1

Q ss_pred             HHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         14 EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        14 ~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ++...+..|+++..|.    .++.+++.+...||..+|.+||++. ++...+.
T Consensus       394 ~~~~~i~~~~~~~~p~----~~~~~l~~li~~cl~~dp~~Rpt~~-~l~~~L~  441 (450)
T 1k9a_A          394 DVVPRVEKGYKMDAPD----GCPPAVYDVMKNCWHLDAATRPTFL-QLREQLE  441 (450)
T ss_dssp             THHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             HHHHHHHcCCCCCCCC----cCCHHHHHHHHHHcCCChhHCcCHH-HHHHHHH
Confidence            3444555566555555    7889999999999999999999996 6666554

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=95.39  E-value=0.053  Score=37.25  Aligned_cols=56  Identities=25%  Similarity=0.614  Sum_probs=43.3

Q ss_pred             CCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCC
Q psy12612         10 ILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEK   70 (116)
Q Consensus        10 ls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~   70 (116)
                      +...++...+..++++..|.    .++.+++.+...||..++.+||++. ++...+..-..
T Consensus       468 ~~~~~~~~~i~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPt~~-~l~~~L~~~~~  523 (535)
T 2h8h_A          468 MVNREVLDQVERGYRMPCPP----ECPESLHDLMCQCWRKEPEERPTFE-YLQAFLEDYFT  523 (535)
T ss_dssp             CCHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHTSSC
T ss_pred             CCHHHHHHHHHcCCCCCCCC----CCCHHHHHHHHHHcCCChhHCcCHH-HHHHHHHHHhh
Confidence            44555666666676665565    7788999999999999999999996 88888876544

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=95.36  E-value=0.034  Score=38.90  Aligned_cols=50  Identities=28%  Similarity=0.624  Sum_probs=37.7

Q ss_pred             HHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         12 RDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        12 ~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..++...+..|.++..|.    .++.+++.++..||..++.+||++. ++...+.
T Consensus       545 ~~~~~~~i~~~~~~~~p~----~~~~~l~~li~~cl~~dP~~RPs~~-~l~~~L~  594 (613)
T 2ozo_A          545 GPEVMAFIEQGKRMECPP----ECPPELYALMSDCWIYKWEDRPDFL-TVEQRMR  594 (613)
T ss_dssp             SHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHTTCSSTTTSCCHH-HHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCC----cCCHHHHHHHHHHcCCChhHCcCHH-HHHHHHH
Confidence            344555666666665565    7889999999999999999999996 6655554

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=94.55  E-value=0.1  Score=36.77  Aligned_cols=51  Identities=29%  Similarity=0.602  Sum_probs=38.3

Q ss_pred             CHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         11 LRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        11 s~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      +..++...+..+.++..|.    .++.+++.+...||..++.+||++. ++...+.
T Consensus       577 ~~~~~~~~i~~~~~~~~p~----~~~~~l~~li~~cl~~dP~~RPs~~-~l~~~L~  627 (635)
T 4fl3_A          577 KGSEVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVENRPGFA-AVELRLR  627 (635)
T ss_dssp             CHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSTTTSCCHH-HHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCCCC----CCCHHHHHHHHHHcCCCHhHCcCHH-HHHHHHH
Confidence            3444555566666555555    7788999999999999999999996 7766654

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=94.31  E-value=0.17  Score=32.45  Aligned_cols=32  Identities=25%  Similarity=0.599  Sum_probs=27.6

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      +++.+++.+...||+.+|.+||++. +++..+.
T Consensus       265 ~~~~~l~~li~~cl~~dP~~RPs~~-ei~~~Le  296 (307)
T 3omv_A          265 NCPKAMKRLVADCVKKVKEERPLFP-QILSSIE  296 (307)
T ss_dssp             TSCHHHHHHHHHHTCSSSTTSCCHH-HHHHHHH
T ss_pred             cchHHHHHHHHHHcCCCHhHCcCHH-HHHHHHH
Confidence            6778999999999999999999996 7766654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=93.63  E-value=0.23  Score=31.68  Aligned_cols=48  Identities=25%  Similarity=0.712  Sum_probs=33.4

Q ss_pred             HHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         14 EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        14 ~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ++...+..+.+...+.    .++.++..+...||..++..||++. +++..+.
T Consensus       258 ~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~-~l~~~L~  305 (333)
T 1mqb_A          258 EVMKAINDGFRLPTPM----DCPSAIYQLMMQCWQQERARRPKFA-DIVSILD  305 (333)
T ss_dssp             HHHHHHHTTCCCCCCT----TCBHHHHHHHHHHTCSSTTTSCCHH-HHHHHHH
T ss_pred             HHHHHHHCCCcCCCcc----cCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHH
Confidence            3344444444433343    6678899999999999999999986 6665554

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=93.28  E-value=0.3  Score=30.36  Aligned_cols=32  Identities=31%  Similarity=0.742  Sum_probs=26.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||..++.+||++. ++...+.
T Consensus       244 ~~~~~l~~li~~~l~~dp~~Rps~~-~l~~~L~  275 (291)
T 1xbb_A          244 GCPREMYDLMNLCWTYDVENRPGFA-AVELRLR  275 (291)
T ss_dssp             TCCHHHHHHHHHHTCSSTTTSCCHH-HHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHH
Confidence            5678899999999999999999985 6665554

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=93.20  E-value=0.2  Score=31.84  Aligned_cols=53  Identities=28%  Similarity=0.632  Sum_probs=37.0

Q ss_pred             HHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCC
Q psy12612         12 RDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGE   69 (116)
Q Consensus        12 ~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~   69 (116)
                      ..++...+..+.....|.    .++.++..+...||..++.+||++. ++...+....
T Consensus       282 ~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~-~~~~~L~~~~  334 (343)
T 1luf_A          282 HEEVIYYVRDGNILACPE----NCPLELYNLMRLCWSKLPADRPSFC-SIHRILQRMC  334 (343)
T ss_dssp             HHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHHTT
T ss_pred             hHHHHHHHhCCCcCCCCC----CCCHHHHHHHHHHcccCcccCCCHH-HHHHHHHHHH
Confidence            334444444444333344    6678999999999999999999986 7777776543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=93.04  E-value=0.21  Score=31.81  Aligned_cols=50  Identities=28%  Similarity=0.697  Sum_probs=34.3

Q ss_pred             HHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         13 DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        13 ~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .++...+..+.+...|.    .++.++..+...||..++.+||++. +++..+..
T Consensus       261 ~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~-eil~~L~~  310 (325)
T 3kul_A          261 RDVISSVEEGYRLPAPM----GCPHALHQLMLDCWHKDRAQRPRFS-QIVSVLDA  310 (325)
T ss_dssp             HHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCC----CcCHHHHHHHHHHccCChhhCcCHH-HHHHHHHH
Confidence            33344444444443444    6778899999999999999999986 66665543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=92.93  E-value=0.24  Score=32.21  Aligned_cols=48  Identities=35%  Similarity=0.798  Sum_probs=34.0

Q ss_pred             HHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         14 EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        14 ~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ++...+..+.+...|.    .++.++..+...||..++.+||++. +++..+.
T Consensus       294 ~~~~~i~~~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~-eil~~l~  341 (367)
T 3l9p_A          294 EVLEFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFA-IILERIE  341 (367)
T ss_dssp             HHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             HHHHHHHcCCCCCCCc----cCCHHHHHHHHHHcCCCHhHCcCHH-HHHHHHH
Confidence            3344444444444444    6778899999999999999999986 6666554

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=92.78  E-value=0.17  Score=33.03  Aligned_cols=48  Identities=27%  Similarity=0.695  Sum_probs=32.9

Q ss_pred             HHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         14 EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        14 ~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ++...+..+.+...+.    .++..+..+...||..++..||++. +++..+.
T Consensus       258 ~~~~~i~~~~~~~~~~----~~~~~l~~li~~cl~~dp~~RPs~~-~i~~~L~  305 (373)
T 2qol_A          258 DVIKAVDEGYRLPPPM----DCPAALYQLMLDCWQKDRNNRPKFE-QIVSILD  305 (373)
T ss_dssp             HHHHHHHTTEECCCCT----TCBHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             HHHHHHHcCCCCCCCc----cccHHHHHHHHHHhCcChhhCcCHH-HHHHHHH
Confidence            3334444444333333    6778999999999999999999986 6655443

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=92.66  E-value=0.2  Score=31.22  Aligned_cols=42  Identities=31%  Similarity=0.799  Sum_probs=31.9

Q ss_pred             hcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         20 RKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        20 ~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.+...|.    .++.++..+...||..+|.+||++. ++...+.
T Consensus       246 ~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~-el~~~L~  287 (295)
T 3ugc_A          246 KNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFR-DLALRVD  287 (295)
T ss_dssp             HTTCCCCCCT----TCCHHHHHHHHHHSCSSGGGSCCHH-HHHHHHH
T ss_pred             hccCcCCCCc----CcCHHHHHHHHHHcCCChhhCCCHH-HHHHHHH
Confidence            3344444455    6788999999999999999999986 6666554

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=92.46  E-value=0.17  Score=32.96  Aligned_cols=32  Identities=38%  Similarity=0.970  Sum_probs=26.7

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .+..+++.+...||..++.+||++. +++..+.
T Consensus       329 ~~~~~l~~li~~~l~~dP~~Rpt~~-ell~~L~  360 (370)
T 2psq_A          329 NCTNELYMMMRDCWHAVPSQRPTFK-QLVEDLD  360 (370)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHH
Confidence            6678899999999999999999985 6666554

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=92.23  E-value=0.33  Score=29.76  Aligned_cols=32  Identities=31%  Similarity=0.810  Sum_probs=26.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||..+|.+||++. +++..+.
T Consensus       231 ~~~~~~~~li~~~l~~~p~~Rps~~-~ll~~l~  262 (269)
T 4hcu_A          231 LASTHVYQIMNHCWRERPEDRPAFS-RLLRQLA  262 (269)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             cCCHHHHHHHHHHccCCcccCcCHH-HHHHHHH
Confidence            5567899999999999999999985 6666554

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=92.09  E-value=0.2  Score=31.84  Aligned_cols=32  Identities=34%  Similarity=0.770  Sum_probs=26.7

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .+..++..+...||..++.+||++. +++..+.
T Consensus       243 ~~~~~~~~li~~~l~~~p~~Rps~~-ell~~l~  274 (327)
T 3poz_A          243 ICTIDVYMIMVKCWMIDADSRPKFR-ELIIEFS  274 (327)
T ss_dssp             TBCHHHHHHHHHHTCSCGGGSCCHH-HHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhhCCCHH-HHHHHHH
Confidence            5678999999999999999999986 6665554

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=91.98  E-value=0.36  Score=29.72  Aligned_cols=32  Identities=34%  Similarity=0.886  Sum_probs=25.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||..++.+||++. ++...+.
T Consensus       234 ~~~~~l~~li~~~l~~~p~~Rps~~-~l~~~l~  265 (279)
T 1qpc_A          234 NCPEELYQLMRLCWKERPEDRPTFD-YLRSVLE  265 (279)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             cccHHHHHHHHHHhccChhhCCCHH-HHHHHHH
Confidence            5677899999999999999999885 5555443

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=91.97  E-value=0.34  Score=31.59  Aligned_cols=49  Identities=31%  Similarity=0.838  Sum_probs=34.2

Q ss_pred             HHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         14 EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        14 ~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ++...+..+.+...|.    .+..++..+...||..++.+||++. +++..+..
T Consensus       301 ~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~-ell~~L~~  349 (382)
T 3tt0_A          301 ELFKLLKEGHRMDKPS----NCTNELYMMMRDCWHAVPSQRPTFK-QLVEDLDR  349 (382)
T ss_dssp             HHHHHHHTTCCCCCCS----SCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCc----cCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHH
Confidence            3334444444444444    6778999999999999999999986 66665543

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=91.92  E-value=0.14  Score=33.54  Aligned_cols=33  Identities=27%  Similarity=0.790  Sum_probs=27.2

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .++.+++.+...||..++.+||++. +++..+..
T Consensus       320 ~~~~~l~~li~~cl~~dp~~RPs~~-ell~~L~~  352 (373)
T 3c1x_A          320 YCPDPLYEVMLKCWHPKAEMRPSFS-ELVSRISA  352 (373)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHH
Confidence            5678899999999999999999986 66655543

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=91.74  E-value=0.38  Score=29.68  Aligned_cols=45  Identities=33%  Similarity=0.718  Sum_probs=31.6

Q ss_pred             HHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         17 ESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        17 ~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+..+.....|.    ..+.++..+...||..++.+||++. +++..+.
T Consensus       232 ~~~~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~-~ll~~L~  276 (283)
T 3gen_A          232 EHIAQGLRLYRPH----LASEKVYTIMYSCWHEKADERPTFK-ILLSNIL  276 (283)
T ss_dssp             HHHHTTCCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHH-HHHHHHH
T ss_pred             HHHhcccCCCCCC----cCCHHHHHHHHHHccCChhHCcCHH-HHHHHHH
Confidence            3344444334444    5667899999999999999999985 6666654

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=91.72  E-value=0.32  Score=30.16  Aligned_cols=32  Identities=34%  Similarity=0.765  Sum_probs=25.9

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||..++.+||++. ++...+.
T Consensus       237 ~~~~~l~~li~~~l~~~p~~Rps~~-~l~~~l~  268 (287)
T 1u59_A          237 ECPPELYALMSDCWIYKWEDRPDFL-TVEQRMR  268 (287)
T ss_dssp             TCCHHHHHHHHHTTCSSGGGSCCHH-HHHHHHH
T ss_pred             CcCHHHHHHHHHHcCCChhhCcCHH-HHHHHHH
Confidence            6678899999999999999999885 5555443

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=91.66  E-value=0.46  Score=29.05  Aligned_cols=34  Identities=29%  Similarity=0.696  Sum_probs=28.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcC
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKG   68 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~   68 (116)
                      ..+.++..+...||..+|.+||++. +++..+..-
T Consensus       229 ~~~~~l~~li~~~l~~~p~~Rps~~-~ll~~L~~l  262 (268)
T 3sxs_A          229 LASDTIYQIMYSCWHELPEKRPTFQ-QLLSSIEPL  262 (268)
T ss_dssp             TSCHHHHHHHHHTTCSSGGGSCCHH-HHHHHHGGG
T ss_pred             cChHHHHHHHHHHcCCChhhCcCHH-HHHHHHHHh
Confidence            5567899999999999999999985 888877653

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=91.31  E-value=0.49  Score=28.86  Aligned_cols=32  Identities=31%  Similarity=0.810  Sum_probs=25.9

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||..+|.+||++. +++..+.
T Consensus       229 ~~~~~l~~li~~~l~~~p~~Rps~~-~ll~~L~  260 (267)
T 3t9t_A          229 LASTHVYQIMNHCWRERPEDRPAFS-RLLRQLA  260 (267)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             cCcHHHHHHHHHHccCChhhCcCHH-HHHHHHH
Confidence            5567889999999999999999885 6666554

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=91.02  E-value=0.58  Score=29.45  Aligned_cols=35  Identities=31%  Similarity=0.831  Sum_probs=29.6

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCC
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGE   69 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~   69 (116)
                      ..+.++..+...||..+|..||++. +++..+....
T Consensus       264 ~~~~~l~~li~~~l~~dp~~Rps~~-e~l~~L~~~~  298 (322)
T 1p4o_A          264 NCPDMLFELMRMCWQYNPKMRPSFL-EIISSIKEEM  298 (322)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHGGGS
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHHhh
Confidence            5678899999999999999999985 8888876543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=90.88  E-value=0.5  Score=30.07  Aligned_cols=32  Identities=38%  Similarity=0.970  Sum_probs=26.2

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .+..++..+...||..++.+||++. +++..+.
T Consensus       283 ~~~~~l~~li~~~l~~dp~~Rps~~-ell~~L~  314 (334)
T 2pvf_A          283 NCTNELYMMMRDCWHAVPSQRPTFK-QLVEDLD  314 (334)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHH-HHHHHHH
Confidence            5678899999999999999999885 6665554

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=90.33  E-value=0.23  Score=31.52  Aligned_cols=33  Identities=30%  Similarity=0.735  Sum_probs=26.9

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .+..++..+...||..++..||++. +++..+..
T Consensus       241 ~~~~~~~~li~~~l~~dp~~Rps~~-el~~~l~~  273 (325)
T 3kex_A          241 ICTIDVYMVMVKCWMIDENIRPTFK-ELANEFTR  273 (325)
T ss_dssp             TBCTTTTHHHHHHTCSCTTTSCCHH-HHHHHHHH
T ss_pred             cCcHHHHHHHHHHcCCChhhCcCHH-HHHHHHHH
Confidence            4566888999999999999999986 77666543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=90.33  E-value=0.4  Score=29.62  Aligned_cols=32  Identities=38%  Similarity=0.910  Sum_probs=25.7

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++.++..+...||..+|.+||++. ++...+.
T Consensus       241 ~~~~~l~~li~~~l~~~p~~Rps~~-~l~~~l~  272 (281)
T 1mp8_A          241 NCPPTLYSLMTKCWAYDPSRRPRFT-ELKAQLS  272 (281)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHH-HHHHHHH
Confidence            5677889999999999999999885 6665554

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=90.31  E-value=0.4  Score=30.03  Aligned_cols=32  Identities=34%  Similarity=0.956  Sum_probs=26.1

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||..+|.+||++. ++...+.
T Consensus       276 ~~~~~~~~li~~~l~~dp~~Rps~~-~l~~~l~  307 (314)
T 2ivs_A          276 NCSEEMYRLMLQCWKQEPDKRPVFA-DISKDLE  307 (314)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHH-HHHHHHH
Confidence            5678899999999999999999885 6666554

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=90.27  E-value=0.39  Score=30.62  Aligned_cols=33  Identities=36%  Similarity=0.823  Sum_probs=27.1

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ..+.++..+...||..+|.+||++. +++..+..
T Consensus       243 ~~~~~l~~li~~~l~~dp~~Rps~~-ell~~L~~  275 (327)
T 3lzb_A          243 ICTIDVYMIMRKCWMIDADSRPKFR-ELIIEFSK  275 (327)
T ss_dssp             TBCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHH-HHHHHHHH
Confidence            5677899999999999999999986 66665543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=90.22  E-value=0.42  Score=29.50  Aligned_cols=33  Identities=45%  Similarity=0.956  Sum_probs=26.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ..+.++..+...||..+|.+||++. +++..+..
T Consensus       238 ~~~~~l~~li~~~l~~~p~~Rps~~-ell~~L~~  270 (281)
T 3cc6_A          238 LCPPVLYTLMTRCWDYDPSDRPRFT-ELVCSLSD  270 (281)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             CCCHHHHHHHHHHccCCchhCcCHH-HHHHHHHH
Confidence            4567889999999999999999885 66666543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=90.14  E-value=0.51  Score=29.90  Aligned_cols=32  Identities=34%  Similarity=0.877  Sum_probs=26.9

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++.++..+...||..+|.+||++. +++..+.
T Consensus       287 ~~~~~l~~li~~cl~~dP~~Rps~~-el~~~L~  318 (326)
T 2w1i_A          287 GCPDEIYMIMTECWNNNVNQRPSFR-DLALRVD  318 (326)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSCCHH-HHHHHHH
T ss_pred             cccHHHHHHHHHHcCCChhhCcCHH-HHHHHHH
Confidence            6778999999999999999999985 6666554

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=89.31  E-value=0.69  Score=32.73  Aligned_cols=32  Identities=38%  Similarity=0.910  Sum_probs=26.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++.++..+...||..+|.+||++. ++...+.
T Consensus       616 ~~~~~l~~li~~~l~~dP~~RPs~~-el~~~L~  647 (656)
T 2j0j_A          616 NCPPTLYSLMTKCWAYDPSRRPRFT-ELKAQLS  647 (656)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             cccHHHHHHHHHHcCCChhHCcCHH-HHHHHHH
Confidence            6678899999999999999999986 6665554

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=89.02  E-value=0.7  Score=29.18  Aligned_cols=32  Identities=34%  Similarity=0.854  Sum_probs=26.7

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++.++..+...||..+|.+||++. +++..+.
T Consensus       275 ~~~~~l~~li~~~l~~dP~~Rps~~-ell~~L~  306 (318)
T 3lxp_A          275 KCPAEVYHLMKNCWETEASFRPTFE-NLIPILK  306 (318)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             cccHHHHHHHHHHcCCCcccCcCHH-HHHHHHH
Confidence            6778999999999999999999986 6665544

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=88.93  E-value=0.56  Score=28.88  Aligned_cols=32  Identities=34%  Similarity=0.802  Sum_probs=26.1

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+..+..+...||..+|..||++. ++...+.
T Consensus       238 ~~~~~l~~li~~~l~~~p~~Rps~~-~l~~~L~  269 (278)
T 1byg_A          238 GCPPAVYEVMKNCWHLDAAMRPSFL-QLREQLE  269 (278)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             cCCHHHHHHHHHHhcCChhhCCCHH-HHHHHHH
Confidence            5667899999999999999999885 6666554

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=88.78  E-value=0.72  Score=28.68  Aligned_cols=43  Identities=30%  Similarity=0.825  Sum_probs=31.6

Q ss_pred             HhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         19 VRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        19 ~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      +..+.+...|.    ..+.++..+...||+.+|.+||++. ++++.+.
T Consensus       256 ~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~-~ll~~L~  298 (302)
T 4e5w_A          256 LKEGKRLPCPP----NCPDEVYQLMRKCWEFQPSNRTSFQ-NLIEGFE  298 (302)
T ss_dssp             HHTTCCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHH-HHHHHHH
T ss_pred             HhccCCCCCCC----CCCHHHHHHHHHHcCCCCCCCCCHH-HHHHHHH
Confidence            33444444444    6678899999999999999999985 7776654

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=88.62  E-value=0.83  Score=28.89  Aligned_cols=32  Identities=44%  Similarity=1.074  Sum_probs=26.2

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||..+|.+||+.. +++..+.
T Consensus       265 ~~~~~l~~li~~~l~~dp~~Rps~~-ell~~L~  296 (327)
T 1fvr_A          265 NCDDEVYDLMRQCWREKPYERPSFA-QILVSLN  296 (327)
T ss_dssp             TBCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHH-HHHHHHH
Confidence            5678899999999999999999885 6665544

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=88.37  E-value=0.57  Score=29.13  Aligned_cols=33  Identities=27%  Similarity=0.790  Sum_probs=26.5

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ..+.++..+...||..+|.+||++. +++..+..
T Consensus       256 ~~~~~l~~li~~~l~~~p~~Rps~~-ell~~L~~  288 (298)
T 3f66_A          256 YCPDPLYEVMLKCWHPKAEMRPSFS-ELVSRISA  288 (298)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHH
Confidence            4567899999999999999999885 66665543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=88.34  E-value=1.2  Score=28.16  Aligned_cols=32  Identities=38%  Similarity=0.950  Sum_probs=26.2

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++.++..+...||..++.+||++. +++..+.
T Consensus       269 ~~~~~l~~li~~~l~~dp~~Rps~~-~ll~~l~  300 (327)
T 2yfx_A          269 NCPGPVYRIMTQCWQHQPEDRPNFA-IILERIE  300 (327)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHH-HHHHHHH
Confidence            5677899999999999999999986 6665544

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=88.30  E-value=0.64  Score=29.30  Aligned_cols=32  Identities=41%  Similarity=0.890  Sum_probs=25.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ....++..+...||..+|.+||++. ++...+.
T Consensus       263 ~~~~~l~~li~~~l~~dp~~Rps~~-~l~~~l~  294 (323)
T 3qup_A          263 ECMEEVYDLMYQCWSADPKQRPSFT-CLRMELE  294 (323)
T ss_dssp             TCCHHHHHHHHHTTCSSGGGSCCHH-HHHHHHH
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHH-HHHHHHH
Confidence            5567899999999999999999875 5555544

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=87.88  E-value=0.22  Score=31.63  Aligned_cols=30  Identities=20%  Similarity=0.453  Sum_probs=24.5

Q ss_pred             HHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         36 EEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        36 ~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ...++.++..||..+|.+||++. ++...+.
T Consensus       264 ~~~l~~li~~cl~~dP~~RPt~~-ei~~~L~  293 (303)
T 3hmm_A          264 LRVMAKIMRECWYANGAARLTAL-RIKKTLS  293 (303)
T ss_dssp             HHHHHHHHHTTCCSSGGGSCCHH-HHHHHHH
T ss_pred             HHHHHHHHHHHcccCHhHCcCHH-HHHHHHH
Confidence            34688999999999999999996 6666554

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=87.70  E-value=0.65  Score=29.13  Aligned_cols=33  Identities=36%  Similarity=0.830  Sum_probs=26.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ....++..+...||..+|..||++. ++...+..
T Consensus       273 ~~~~~l~~li~~~l~~dp~~Rps~~-~l~~~L~~  305 (313)
T 3brb_A          273 DCLDELYEIMYSCWRTDPLDRPTFS-VLRLQLEK  305 (313)
T ss_dssp             TCCHHHHHHHHHTTCSSGGGSCCHH-HHHHHHHH
T ss_pred             cccHHHHHHHHHHcCCChhhCcCHH-HHHHHHHH
Confidence            5567899999999999999999885 66665543

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=86.86  E-value=0.96  Score=28.02  Aligned_cols=32  Identities=34%  Similarity=0.904  Sum_probs=25.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||..+|.+||++. +++..+.
T Consensus       252 ~~~~~l~~li~~~l~~~p~~Rps~~-~ll~~l~  283 (298)
T 3pls_A          252 YCPDSLYQVMQQCWEADPAVRPTFR-VLVGEVE  283 (298)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             cchHHHHHHHHHHccCChhhCcCHH-HHHHHHH
Confidence            4567889999999999999999885 5555544

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=86.77  E-value=1.2  Score=28.21  Aligned_cols=33  Identities=33%  Similarity=0.837  Sum_probs=28.2

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .++.++..+...||..+|.+||++. +++..+..
T Consensus       268 ~~~~~l~~li~~~l~~dP~~Rps~~-ell~~L~~  300 (327)
T 3lxl_A          268 ACPAEVHELMKLCWAPSPQDRPSFS-ALGPQLDM  300 (327)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             cccHHHHHHHHHHcCCChhhCcCHH-HHHHHHHH
Confidence            6678899999999999999999986 77776664

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=86.50  E-value=1.2  Score=28.28  Aligned_cols=34  Identities=29%  Similarity=0.601  Sum_probs=28.1

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcC
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKG   68 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~   68 (116)
                      ..+.++..+...||..+|.+||++. ++...+...
T Consensus       299 ~~~~~l~~li~~~l~~dp~~Rps~~-~l~~~l~~~  332 (344)
T 1rjb_A          299 YATEEIYIIMQSCWAFDSRKRPSFP-NLTSFLGCQ  332 (344)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCCchhCcCHH-HHHHHHHHH
Confidence            5678899999999999999999986 777766543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=86.32  E-value=1.6  Score=27.38  Aligned_cols=32  Identities=38%  Similarity=0.888  Sum_probs=26.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||..++.+||++. +++..+.
T Consensus       228 ~~~~~l~~li~~~l~~dp~~Rps~~-ell~~L~  259 (307)
T 2eva_A          228 NLPKPIESLMTRCWSKDPSQRPSME-EIVKIMT  259 (307)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             ccCHHHHHHHHHHhcCChhhCcCHH-HHHHHHH
Confidence            5667899999999999999999986 6666554

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=86.27  E-value=1.5  Score=26.68  Aligned_cols=33  Identities=42%  Similarity=0.718  Sum_probs=26.9

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ..+.++..+...||..+|..||++. +++..+..
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rps~~-~il~~L~~  267 (271)
T 3kmu_A          235 GISPHVSKLMKICMNEDPAKRPKFD-MIVPILEK  267 (271)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHH
Confidence            5667899999999999999999885 77766653

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=85.96  E-value=1.3  Score=28.02  Aligned_cols=32  Identities=28%  Similarity=0.749  Sum_probs=25.6

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||..+|..||++. ++...+.
T Consensus       291 ~~~~~l~~li~~~l~~~p~~Rps~~-~l~~~L~  322 (333)
T 2i1m_A          291 FAPKNIYSIMQACWALEPTHRPTFQ-QICSFLQ  322 (333)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             CCCHHHHHHHHHHhccChhhCcCHH-HHHHHHH
Confidence            4567889999999999999999885 6665554

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=85.34  E-value=1.3  Score=27.35  Aligned_cols=33  Identities=39%  Similarity=0.925  Sum_probs=26.3

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ..+.++..+...|+..++.+||++. +++..+..
T Consensus       236 ~~~~~l~~li~~~l~~dp~~Rps~~-~~~~~l~~  268 (288)
T 3kfa_A          236 GCPEKVYELMRACWQWNPSDRPSFA-EIHQAFET  268 (288)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             CCCHHHHHHHHHHhCCChhhCcCHH-HHHHHHHH
Confidence            5667899999999999999999885 66665543

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=84.94  E-value=1.6  Score=27.29  Aligned_cols=32  Identities=38%  Similarity=0.797  Sum_probs=25.3

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ....++..+...||..+|.+||++. +++..+.
T Consensus       275 ~~~~~l~~li~~~l~~dp~~Rps~~-ell~~L~  306 (316)
T 2xir_A          275 YTTPEMYQTMLDCWHGEPSQRPTFS-ELVEHLG  306 (316)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHH
Confidence            4567889999999999999999885 6666554

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=84.87  E-value=2  Score=26.49  Aligned_cols=32  Identities=31%  Similarity=0.886  Sum_probs=27.3

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||..+|.+||++. +++..+.
T Consensus       254 ~~~~~l~~li~~~l~~dp~~Rps~~-~ll~~L~  285 (287)
T 4f0f_A          254 DCPPRLRNVIELCWSGDPKKRPHFS-YIVKELS  285 (287)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             ccCHHHHHHHHHHhcCChhhCcCHH-HHHHHHH
Confidence            5677899999999999999999985 7777665

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=84.14  E-value=1.7  Score=27.71  Aligned_cols=32  Identities=38%  Similarity=0.797  Sum_probs=25.8

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ....++..+...||..+|.+||++. +++..+.
T Consensus       320 ~~~~~l~~li~~~l~~dP~~Rps~~-ell~~L~  351 (359)
T 3vhe_A          320 YTTPEMYQTMLDCWHGEPSQRPTFS-ELVEHLG  351 (359)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHH-HHHHHHH
Confidence            4567888999999999999999885 6766654

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=84.08  E-value=3.1  Score=25.31  Aligned_cols=32  Identities=44%  Similarity=1.038  Sum_probs=27.1

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++.++..+...||..+|.+||++. ++++.+.
T Consensus       238 ~~~~~~~~li~~~l~~~p~~Rps~~-e~l~~L~  269 (271)
T 3dtc_A          238 TCPEPFAKLMEDCWNPDPHSRPSFT-NILDQLT  269 (271)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             ccCHHHHHHHHHHhcCCcccCcCHH-HHHHHHh
Confidence            5667899999999999999999985 7877765

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=83.81  E-value=1.9  Score=26.86  Aligned_cols=32  Identities=41%  Similarity=0.884  Sum_probs=25.1

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+.++..+...||..+|.+||++. +++..+.
T Consensus       272 ~~~~~l~~li~~~l~~dp~~Rps~~-ell~~L~  303 (313)
T 1t46_A          272 HAPAEMYDIMKTCWDADPLKRPTFK-QIVQLIE  303 (313)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCCchhCcCHH-HHHHHHH
Confidence            4567888899999999999999875 6666554

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=83.45  E-value=2.8  Score=25.74  Aligned_cols=34  Identities=24%  Similarity=0.800  Sum_probs=28.3

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcC
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKG   68 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~   68 (116)
                      ..+.++..+...||..++.+||++. ++...+...
T Consensus       249 ~~~~~l~~li~~~l~~~p~~Rps~~-~l~~~l~~~  282 (291)
T 1u46_A          249 DCPQDIYNVMVQCWAHKPEDRPTFV-ALRDFLLEA  282 (291)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHHH
T ss_pred             CcCHHHHHHHHHHccCCcccCcCHH-HHHHHHHHh
Confidence            5678899999999999999999985 777776653

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=83.17  E-value=1.8  Score=27.26  Aligned_cols=33  Identities=33%  Similarity=0.827  Sum_probs=27.2

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      ..+.++..+...||..+|.+||++. +++..+..
T Consensus       263 ~~~~~l~~li~~~l~~dP~~Rps~~-~ll~~L~~  295 (309)
T 3p86_A          263 NLNPQVAAIIEGCWTNEPWKRPSFA-TIMDLLRP  295 (309)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHH-HHHHHHHH
Confidence            5667899999999999999999986 77666554

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=82.65  E-value=2  Score=26.26  Aligned_cols=30  Identities=30%  Similarity=0.488  Sum_probs=24.3

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHH
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVES   64 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~   64 (116)
                      ..+.++..+...||..++.+||++. +++..
T Consensus       239 ~~~~~l~~li~~~l~~~p~~Rps~~-~ll~~  268 (279)
T 2w5a_A          239 RYSDELNEIITRMLNLKDYHRPSVE-EILEN  268 (279)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHH-HHHTS
T ss_pred             ccCHHHHHHHHHHcCCCcccCCCHH-HHHhC
Confidence            5667889999999999999999885 66543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=82.27  E-value=3.2  Score=25.91  Aligned_cols=35  Identities=29%  Similarity=0.618  Sum_probs=28.4

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCC
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGE   69 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~   69 (116)
                      ..+.++..+...||..++.+||++. +++..+....
T Consensus       267 ~~~~~l~~li~~~l~~~p~~Rpt~~-~l~~~l~~l~  301 (319)
T 2y4i_B          267 GMGKEISDILLFCWAFEQEERPTFT-KLMDMLEKLP  301 (319)
T ss_dssp             SCCTTHHHHHHHHHCSSTTTSCCHH-HHHHHHTTC-
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHH-HHHHHHHHHH
Confidence            4566889999999999999999985 8888776543

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=81.13  E-value=4.7  Score=24.89  Aligned_cols=33  Identities=24%  Similarity=0.695  Sum_probs=27.3

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .++.++..+...||..++.+||++. +++..+..
T Consensus       253 ~~~~~l~~li~~~l~~~p~~Rps~~-ell~~L~~  285 (289)
T 3og7_A          253 NCPKRMKRLMAECLKKKRDERPSFP-RILAEIEE  285 (289)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCCCHH-HHHHHHHH
Confidence            4567899999999999999999985 77777654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	116
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	9e-07
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	8e-06
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-06
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	7e-06
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-06
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	7e-06
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-06
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-05
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-06
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-06
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-06
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-05
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-06
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-05
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-06
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	6e-04
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	6e-06
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	9e-06
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-05
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-05
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-04
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-05
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-05
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-05
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-04
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-05
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-05
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-05
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-05
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-05
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	8e-05
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-05
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-04
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-05
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	5e-04
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-05
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-04
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-04
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-05
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-04
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	8e-05
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-04
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-04
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	6e-04
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-04
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-04
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-04
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-04
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-04
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	0.002
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	0.004

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 9e-07
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 4/52 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR 111
           E++  + +G++   P      C  E+ A+M  CW     +RPDF T++  +R
Sbjct: 220 EVMAFIEQGKRMECPP----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 8e-06
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR 66
            E++  + +G++   P      C  E+ A+M  CW     +RPDF   + + +R
Sbjct: 219 PEVMAFIEQGKRMECPP----ECPPELYALMSDCWIYKWEDRPDF-LTVEQRMR 267

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 2e-06
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 4/63 (6%)

Query: 51  PSERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
                   +E+VE +  G +  +P L        V  IM  CW E P +RP F+ L   +
Sbjct: 201 IPYENRSNSEVVEDISTGFRLYKPRL----ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 256

Query: 111 RKL 113
            ++
Sbjct: 257 AEI 259

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 7e-06
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTT------EIVES 64
            E+VE +  G +  +P L        V  IM  CW E P +RP F+       EI ES
Sbjct: 209 SEVVEDISTGFRLYKPRL----ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 2e-06
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           +I   + +G + L+P      C + +  +M +CW+     RP F+ L + I  +
Sbjct: 242 DITVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 7e-06
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLR 73
           +I   + +G + L+P      C + +  +M +CW+     RP F +E+V  +        
Sbjct: 242 DITVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRPSF-SELVSRI---SAIFS 293

Query: 74  PSLSE 78
             + E
Sbjct: 294 TFIGE 298

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 3e-06
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 4/52 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR 111
           E+   + KGE+   P+     C  E+  +M  CW  D   RP F  ++  +R
Sbjct: 218 EVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVENRPGFAAVELRLR 265

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 2e-05
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 5/51 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
            E+   + KGE+   P      C  E+  +M  CW  D   RP F   +  
Sbjct: 217 SEVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVENRPGF-AAVEL 262

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 3e-06
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E  E + +G +  RP L      E+V  IM  CW+E   ERP F  L + I  +
Sbjct: 209 ETAEHIAQGLRLYRPHL----ASEKVYTIMYSCWHEKADERPTFKILLSNILDV 258

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 5e-06
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR 66
            E  E + +G +  RP+L      E+V  IM  CW+E   ERP F   ++ ++ 
Sbjct: 208 SETAEHIAQGLRLYRPHL----ASEKVYTIMYSCWHEKADERPTF-KILLSNIL 256

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (98), Expect = 3e-06
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 53  ERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK 112
             P     + + V + EK  +    +  C   V  +MK CW+ D + RP F  L+  +  
Sbjct: 198 RVPYPRIPLKDVVPRVEKGYKMDAPD-GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 256

Query: 113 L 113
           +
Sbjct: 257 I 257

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 4e-05
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
            ++V  V KG K   P+     C   V  +MK CW+ D + RP F  ++ E
Sbjct: 207 KDVVPRVEKGYKMDAPD----GCPPAVYEVMKNCWHLDAAMRPSF-LQLRE 252

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 4e-06
 Identities = 15/65 (23%), Positives = 26/65 (40%)

Query: 51  PSERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
           P    +   +I+  V +G      S     C + +  +M  C  +   ERP F  + A+I
Sbjct: 208 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267

Query: 111 RKLNK 115
             L +
Sbjct: 268 ELLAR 272

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 3e-05
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 12  RDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           RD+I+  V +G      +     C + +  +M  C  +   ERP F  +I+ S+  
Sbjct: 215 RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLF-PQILASIEL 269

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 41.7 bits (97), Expect = 4e-06
 Identities = 15/50 (30%), Positives = 18/50 (36%), Gaps = 2/50 (4%)

Query: 66  RKGEKCLRPSLSELT--CEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           R GEK     L EL     EE    M    N      PD+  L+    K+
Sbjct: 227 RIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 276

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 35.6 bits (81), Expect = 6e-04
 Identities = 13/42 (30%), Positives = 14/42 (33%), Gaps = 2/42 (4%)

Query: 20  RKGEKCLRPNLSELT--CEEEVTAIMKRCWNEDPSERPDFTT 59
           R GEK     L EL     EE    M    N      PD+  
Sbjct: 227 RIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDY 268

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 6e-06
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+++++ +G + +RP      C EE+  +M+ CW E P +RP F  L++ +   
Sbjct: 218 EVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (93), Expect = 2e-05
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
            E+++++ +G + +RP+     C EE+  +M+ CW E P +RP F   +  
Sbjct: 217 PEVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTF-DYLRS 262

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.6 bits (94), Expect = 9e-06
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E++  VR G     P      C  E+  +M+ CW++ P++RP F ++   ++++
Sbjct: 250 EVIYYVRDGNILACPE----NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 299

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.7 bits (89), Expect = 5e-05
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           +E++  VR G     P      C  E+  +M+ CW++ P++RP F   I   +++
Sbjct: 249 EEVIYYVRDGNILACPE----NCPLELYNLMRLCWSKLPADRPSF-CSIHRILQR 298

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 1e-05
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 51  PSERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAI 110
              +     +++  +  GE+   P      C   + ++M +CW  DPS RP FT LKA +
Sbjct: 208 KPFQGVKNNDVIGRIENGERLPMPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 263

Query: 111 RKL 113
             +
Sbjct: 264 STI 266

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 3e-04
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
           ++++  +  GE+   P      C   + ++M +CW  DPS RP F TE+   +  
Sbjct: 216 NDVIGRIENGERLPMPP----NCPPTLYSLMTKCWAYDPSRRPRF-TELKAQLST 265

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 1e-05
 Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 8/68 (11%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCL 72
           ++++  V +G    +P+     C + +  +M+ CW  +P  RP F  EI+ S+   ++ +
Sbjct: 242 EQVLRFVMEGGLLDKPD----NCPDMLFELMRMCWQYNPKMRPSF-LEIISSI---KEEM 293

Query: 73  RPSLSELT 80
            P   E++
Sbjct: 294 EPGFREVS 301

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 9e-05
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           +++  V +G    +P      C + +  +M+ CW  +P  RP F  + ++I++ 
Sbjct: 243 QVLRFVMEGGLLDKPD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 292

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.2 bits (93), Expect = 1e-05
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 2/51 (3%)

Query: 65  VRKGEKCLRPSLSEL--TCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
            R  EK +   +  L      E    +  C +    ++PD++ L+   R L
Sbjct: 226 ERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.6 bits (81), Expect = 5e-04
 Identities = 8/43 (18%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 19  VRKGEKCLRPNLSEL--TCEEEVTAIMKRCWNEDPSERPDFTT 59
            R  EK +   +  L      E    +  C +    ++PD++ 
Sbjct: 226 ERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSY 268

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 1e-05
 Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 4/56 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           E+ E + +G +  +P      C++EV  +M++CW E P ERP F  +  ++ ++ +
Sbjct: 234 ELYEKLPQGYRLEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 285

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 4e-05
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 5/55 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
            E+ E + +G +  +P    L C++EV  +M++CW E P ERP F  +I+ S+ +
Sbjct: 233 AELYEKLPQGYRLEKP----LNCDDEVYDLMRQCWREKPYERPSF-AQILVSLNR 282

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 2e-05
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           EI   + KGE+  +P      C  +V  IM +CW  D   RP F  L     K+ +
Sbjct: 221 EISSILEKGERLPQPP----ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 5e-05
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK 67
            EI   + KGE+  +P      C  +V  IM +CW  D   RP F  E++    K
Sbjct: 220 SEISSILEKGERLPQPP----ICTIDVYMIMVKCWMIDADSRPKF-RELIIEFSK 269

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.4 bits (91), Expect = 3e-05
 Identities = 10/54 (18%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           +++ ++ +  +   P    + C   +  +M  CW +D + RP F  +   + K+
Sbjct: 241 DVINAIEQDYRLPPP----MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 290

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (88), Expect = 8e-05
 Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 8/62 (12%)

Query: 12  RDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKC 71
             +++ ++ +  +   P    + C   +  +M  CW +D + RP F  +IV ++   +K 
Sbjct: 239 NQDVINAIEQDYRLPPP----MDCPSALHQLMLDCWQKDRNHRPKF-GQIVNTL---DKM 290

Query: 72  LR 73
           +R
Sbjct: 291 IR 292

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.3 bits (91), Expect = 3e-05
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           ++ E + K  +  RP      C E+V  +M+ CW  +PS+RP F  +  A   + +
Sbjct: 224 QVYELLEKDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.4 bits (86), Expect = 1e-04
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 12/74 (16%)

Query: 12  RDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKC 71
             ++ E + K  +  RP      C E+V  +M+ CW  +PS+RP F  EI ++       
Sbjct: 222 LSQVYELLEKDYRMERPE----GCPEKVYELMRACWQWNPSDRPSF-AEIHQA------- 269

Query: 72  LRPSLSELTCEEEV 85
                 E +  +EV
Sbjct: 270 FETMFQESSISDEV 283

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 3e-05
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 4/68 (5%)

Query: 46  CWNEDPSERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTT 105
                P        E    +++G +   P         E+   M  CW+ +PS+RP F+ 
Sbjct: 231 SLGASPYPGVKIDEEFCRRLKEGTRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTFSE 286

Query: 106 LKAAIRKL 113
           L   +  L
Sbjct: 287 LVEHLGNL 294

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 5e-04
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 5/53 (9%)

Query: 11  LRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           + +E    +++G +   P+        E+   M  CW+ +PS+RP F +E+VE
Sbjct: 242 IDEEFCRRLKEGTRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTF-SELVE 289

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 4e-05
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+ + +++G +  +PS     C  E+  +M+ CW+  PS+RP F  L   + ++
Sbjct: 245 ELFKLLKEGHRMDKPS----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 1e-04
 Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 5/51 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           +E+ + +++G +  +P+     C  E+  +M+ CW+  PS+RP F  ++VE
Sbjct: 244 EELFKLLKEGHRMDKPS----NCTNELYMMMRDCWHAVPSQRPTF-KQLVE 289

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 5e-05
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 69  EKCLRPSLSELT----CEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK 115
           E+ LRP++            +  IM+ CW  + + R     +K  + +L++
Sbjct: 247 EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 5e-04
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 7/64 (10%)

Query: 10  ILRDEIVESVRKG--EKCLRPNLSELT----CEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           +  D  VE +RK   E+ LRPN+            +  IM+ CW  + + R      I +
Sbjct: 232 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA-LRIKK 290

Query: 64  SVRK 67
           ++ +
Sbjct: 291 TLSQ 294

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 5e-05
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+++ V +G +   P      C E +  +M +CW ++P ERP F  L+A +   
Sbjct: 222 EVLDQVERGYRMPCPP----ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 271

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 3e-04
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 14  EIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
           E+++ V +G +   P      C E +  +M +CW ++P ERP F   +  
Sbjct: 222 EVLDQVERGYRMPCPP----ECPESLHDLMCQCWRKEPEERPTF-EYLQA 266

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 8e-05
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           E+++++  G +   P      C   +  +M +CW ++ + RP F  + + + KL
Sbjct: 221 EVMKAINDGFRLPTPM----DCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 270

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 3e-04
 Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 5/52 (9%)

Query: 12  RDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
             E+++++  G +   P    + C   +  +M +CW ++ + RP F  +IV 
Sbjct: 219 NHEVMKAINDGFRLPTP----MDCPSAIYQLMMQCWQQERARRPKF-ADIVS 265

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 1e-04
 Identities = 12/61 (19%), Positives = 25/61 (40%)

Query: 53  ERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK 112
           + P       + + K +K          C +++  +M +CW   P +RP F  L+  + +
Sbjct: 212 QEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 271

Query: 113 L 113
            
Sbjct: 272 A 272

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 6e-04
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 5/45 (11%)

Query: 19  VRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
            ++GE+  RP      C +++  +M +CW   P +RP F   + +
Sbjct: 228 DKEGERLPRPE----DCPQDIYNVMVQCWAHKPEDRPTF-VALRD 267

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 1e-04
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 4/58 (6%)

Query: 49  EDPSERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTL 106
            +P           + ++ G K  +P        EE+  IM+ CW  D  +RP F  L
Sbjct: 264 VNPYPGIPVDANFYKLIQNGFKMDQPF----YATEEIYIIMQSCWAFDSRKRPSFPNL 317

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 2e-04
 Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 5/52 (9%)

Query: 12  RDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
                + ++ G K  +P        EE+  IM+ CW  D  +RP F   +  
Sbjct: 273 DANFYKLIQNGFKMDQPF----YATEEIYIIMQSCWAFDSRKRPSF-PNLTS 319

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.9 bits (85), Expect = 2e-04
 Identities = 10/55 (18%), Positives = 19/55 (34%)

Query: 53  ERPDFTTEIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK 107
           + P F    + ++    +   P+L      E     +  C  + P +RP    L 
Sbjct: 211 KPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 265

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 3e-04
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL 113
           +  + +++G + L P         E+  IMK CW+ DP +RP F  +   I K 
Sbjct: 256 KFYKMIKEGFRMLSPE----HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 3e-04
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 13  DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVE 63
            +  + +++G + L P         E+  IMK CW+ DP +RP F  +IV+
Sbjct: 255 SKFYKMIKEGFRMLSPE----HAPAEMYDIMKTCWDADPLKRPTF-KQIVQ 300

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (78), Expect = 0.002
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 65  VRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK 107
            R+    ++P+  +     EV  I++ C  ++  ER     L 
Sbjct: 222 YRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 264

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (75), Expect = 0.004
 Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 4/48 (8%)

Query: 60  EIVESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK 107
           E+   +R+G+    P        +E+  I+ R  N     RP    + 
Sbjct: 221 ELAGKIREGKFRRIPY----RYSDELNEIITRMLNLKDYHRPSVEEIL 264

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	116
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.93
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.93
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.92
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.92
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.91
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.91
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.91
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.91
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.91
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.91
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.9
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.9
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.89
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.89
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.89
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.89
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.88
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.88
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.86
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.83
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.83
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.81
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.81
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.81
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.81
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.79
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.76
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.75
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.75
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.74
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.74
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.72
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.72
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.72
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.72
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.7
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.69
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.67
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.67
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.66
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.66
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.65
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.64
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.64
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.62
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.62
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.59
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.57
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.55
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.53
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.51
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.49
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.48
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.46
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.42
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.38
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.35
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.31
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.25
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.18
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	97.16
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	97.16
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	97.14
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	97.14
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	96.86
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	96.83
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	96.75
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	96.7
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	96.5
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	96.34
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	96.24
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	96.03
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	95.96
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	95.96
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	95.93
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	95.86
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	95.82
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	95.8
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	95.31
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	95.25
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	95.1
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	93.09
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	87.63
d1uj8a1	64	Iron-sulfur cluster assembly protein IscX {Escheri	85.58
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	81.27

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.9e-26  Score=145.07  Aligned_cols=111  Identities=18%  Similarity=0.368  Sum_probs=83.6

Q ss_pred             CeeecCCCCCCHHHHH----HHH---hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHH
Q psy12612          1 MRVELSDLRILRDEIV----ESV---RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESV   65 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~~----~~~---~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l   65 (116)
                      .++||+|||+++.-..    ...   ..|. .+.+||.   ..++.++||||||+++||+.+++.|.+.    .++...+
T Consensus       147 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i  226 (283)
T d1mqba_         147 LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI  226 (283)
T ss_dssp             CCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred             CeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHH
Confidence            3699999999964211    111   1122 4678885   4578899999999999999887666543    4677888


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      ..+.++..|.    .++.++.+||.+||+.||++||+|.+|+..|+.+.+
T Consensus       227 ~~~~~~~~~~----~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         227 NDGFRLPTPM----DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             HTTCCCCCCT----TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             hccCCCCCch----hhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            8888766665    799999999999999999999999999999988754

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.3e-26  Score=144.42  Aligned_cols=110  Identities=23%  Similarity=0.445  Sum_probs=82.4

Q ss_pred             eeecCCCCCCHHHHHH--H---HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE--S---VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~---~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      ++||+|||+++.....  .   ...| ..+.+||.   ..|+.++||||||+++||+.+++.|.+.    .++...+..+
T Consensus       139 ~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~  218 (263)
T d1sm2a_         139 VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG  218 (263)
T ss_dssp             CEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHT
T ss_pred             CeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhc
Confidence            6899999999642211  1   1112 24677875   4578999999999999999887666553    3677788888


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .++..|.    .+++++.+||.+||+.||++|||+++|++.|+++.+
T Consensus       219 ~~~~~p~----~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         219 FRLYKPR----LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCcc----ccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            8777776    789999999999999999999999999999998754

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=2.1e-26  Score=145.87  Aligned_cols=111  Identities=22%  Similarity=0.413  Sum_probs=84.9

Q ss_pred             CeeecCCCCCCHHHHHH------HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHh
Q psy12612          1 MRVELSDLRILRDEIVE------SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVR   66 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~~~------~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~   66 (116)
                      +++||+|||+++.-...      ....| ..+.+|+.   ..|+.++||||||+++||+..+..|+|.    .++...+.
T Consensus       177 ~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~  256 (301)
T d1lufa_         177 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR  256 (301)
T ss_dssp             GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred             CcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHH
Confidence            36899999998632110      00111 13556664   4578999999999999999887665443    47778888


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+.++..|.    .+++++.+||.+||+.+|++||||.+|+..|+++.+
T Consensus       257 ~~~~~~~p~----~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~  301 (301)
T d1lufa_         257 DGNILACPE----NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  301 (301)
T ss_dssp             TTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             cCCCCCCCc----cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            888766665    789999999999999999999999999999998754

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=1.5e-25  Score=141.87  Aligned_cols=110  Identities=19%  Similarity=0.388  Sum_probs=78.6

Q ss_pred             CeeecCCCCCCHHHHH----HHH--h---cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHH
Q psy12612          1 MRVELSDLRILRDEIV----ESV--R---KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVE   63 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~~----~~~--~---~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~   63 (116)
                      .++||+|||+++.-..    ...  .   .| ..+++||.   ..|+.++||||||+++||+.+ +..|...   .++..
T Consensus       165 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~  244 (299)
T d1jpaa_         165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN  244 (299)
T ss_dssp             CCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred             CcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            3699999999863211    000  0   11 23567775   357889999999999999987 4555432   46777


Q ss_pred             HHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         64 SVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        64 ~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+..+.++..|.    .++.++.+||.+||+.||++||++.+|+..|+.+.
T Consensus       245 ~i~~~~~~~~~~----~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l  291 (299)
T d1jpaa_         245 AIEQDYRLPPPM----DCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI  291 (299)
T ss_dssp             HHHTTCCCCCCT----TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCc----cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            888888766655    79999999999999999999999999999998874

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.2e-26  Score=144.03  Aligned_cols=111  Identities=22%  Similarity=0.414  Sum_probs=86.5

Q ss_pred             CeeecCCCCCCHHHHHH-----HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          1 MRVELSDLRILRDEIVE-----SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~~~-----~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      .++||+|||+++.-...     ....| ..+.+||.   ..++.++||||||+++||+.++++|.+.    .++...+..
T Consensus       146 ~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~  225 (272)
T d1qpca_         146 LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER  225 (272)
T ss_dssp             SCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT
T ss_pred             cceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            36899999998621000     00112 23667775   4578899999999999999988777654    367778888


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +.++..|.    .++.++.+||.+||+.||++|||+.+|+..|+++..
T Consensus       226 ~~~~~~p~----~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         226 GYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             TCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCCCCCcc----cChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            88776665    799999999999999999999999999999998754

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.3e-25  Score=138.78  Aligned_cols=109  Identities=22%  Similarity=0.425  Sum_probs=81.5

Q ss_pred             eeecCCCCCCHHHHHH--HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVE--SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~--~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~~~~   72 (116)
                      ++||+|||+++.....  .......+.+||.   ..++.++||||||+++||+.+..+|++.    .++...+.++.++.
T Consensus       141 ~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~  220 (262)
T d1byga_         141 VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD  220 (262)
T ss_dssp             CEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCC
T ss_pred             CEeecccccceecCCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            5899999999853211  1112234667775   4578899999999999999886555443    36777888887766


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .|.    .+++++.+|+.+||..||.+||||.+|++.|+.+.
T Consensus       221 ~~~----~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         221 APD----GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCc----cCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            555    78899999999999999999999999999998875

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.3e-25  Score=139.71  Aligned_cols=109  Identities=21%  Similarity=0.407  Sum_probs=82.3

Q ss_pred             eeecCCCCCCHHHH-------HHHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEI-------VESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~-------~~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||+++.-.       ......| .++++||.   ..++.++||||||+++||+.+ +..|...   .++...+.
T Consensus       145 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~  224 (277)
T d1xbba_         145 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE  224 (277)
T ss_dssp             EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred             cccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHH
Confidence            68999999985210       0111112 24678875   457889999999999999877 4555322   46777888


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ++.++..|.    .++.++.+||.+||+.||++||||.+|...|+.+.
T Consensus       225 ~~~~~~~p~----~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~  268 (277)
T d1xbba_         225 KGERMGCPA----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  268 (277)
T ss_dssp             TTCCCCCCT----TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             cCCCCCCCc----ccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHH
Confidence            888766665    79999999999999999999999999998887653

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.7e-25  Score=141.02  Aligned_cols=109  Identities=23%  Similarity=0.345  Sum_probs=83.7

Q ss_pred             eeecCCCCCCHHHH------HHHHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEI------VESVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~------~~~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      ++||+|||+++.-.      ......| ..+.+||.   ..|+.++||||||+++||+.+++.++|.    .++...+..
T Consensus       149 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~  228 (317)
T d1xkka_         149 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK  228 (317)
T ss_dssp             EEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHH
T ss_pred             CeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc
Confidence            68999999986311      0111112 35678875   4578999999999999999885555443    367778888


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.++..|.    .++.++.+||.+||+.||++||||.+|+..|..+.
T Consensus       229 ~~~~~~p~----~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         229 GERLPQPP----ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             TCCCCCCT----TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCc----ccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence            88776665    79999999999999999999999999999887764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.8e-25  Score=139.26  Aligned_cols=115  Identities=18%  Similarity=0.298  Sum_probs=81.1

Q ss_pred             CeeecCCCCCCHHHH----HHHHh--cCC-CCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHH
Q psy12612          1 MRVELSDLRILRDEI----VESVR--KGE-KCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVE   63 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~----~~~~~--~g~-~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~   63 (116)
                      .++||+|||+++...    .....  .|. .+++||.      ..|+.++||||||+++||+.++..|+..    ..+..
T Consensus       141 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~  220 (276)
T d1uwha_         141 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF  220 (276)
T ss_dssp             SSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH
T ss_pred             CCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHH
Confidence            368999999985321    11111  122 4678875      2368899999999999999998887532    24555


Q ss_pred             HHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         64 SVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        64 ~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+..+...+...-....+++++.+||.+||+.||++||||.+|+..|+.+.+
T Consensus       221 ~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         221 MVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             HHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            5666654322111123688999999999999999999999999999998764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.6e-26  Score=142.18  Aligned_cols=108  Identities=21%  Similarity=0.408  Sum_probs=82.0

Q ss_pred             eeecCCCCCCHHHHHH----H---HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCC-CCCCCCh---HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVE----S---VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDP-SERPDFT---TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~---~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~-~~~p~~~---~~~~~~l~   66 (116)
                      ++||+|||+++.-...    .   ...| .++.+||.   ..++.++||||||+++||+.+ +..|+..   .++...+.
T Consensus       147 ~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~  226 (285)
T d1u59a_         147 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE  226 (285)
T ss_dssp             EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH
T ss_pred             ceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            6899999998631100    0   0011 13567775   457889999999999999877 5555321   37778888


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .|.++..|.    .+++++++||.+||+.||++||+|.+|.+.|+..
T Consensus       227 ~~~~~~~p~----~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~  269 (285)
T d1u59a_         227 QGKRMECPP----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  269 (285)
T ss_dssp             TTCCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCCCCCC----cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            888766665    7999999999999999999999999999988765

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.4e-25  Score=137.68  Aligned_cols=109  Identities=27%  Similarity=0.439  Sum_probs=76.6

Q ss_pred             eeecCCCCCCHHHHHH-----HHhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE-----SVRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-----~~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      ++||+|||+++.....     ....| ..+.+|+.   ..|+.++||||||+++||+.+.+.|+|.    .++...+..+
T Consensus       146 ~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~  225 (273)
T d1mp8a_         146 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG  225 (273)
T ss_dssp             EEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT
T ss_pred             cEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence            6899999998642111     11112 24667775   4578899999999999998775444332    3677778888


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+...|.    .+++++.+||.+||+.||++|||+.+|+..|+.+.
T Consensus       226 ~~~~~~~----~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~  267 (273)
T d1mp8a_         226 ERLPMPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  267 (273)
T ss_dssp             CCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCC----CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            7665554    79999999999999999999999999999998874

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.4e-25  Score=138.39  Aligned_cols=108  Identities=25%  Similarity=0.416  Sum_probs=80.9

Q ss_pred             CeeecCCCCCCHHHHHHH--Hh---cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          1 MRVELSDLRILRDEIVES--VR---KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~~~~--~~---~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      .++||+|||+++......  ..   .| ..+.+||.   ..++.++||||||+++||+.+.++++|.    .++...+.+
T Consensus       137 ~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~  216 (258)
T d1k2pa_         137 GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ  216 (258)
T ss_dssp             CCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT
T ss_pred             CcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHh
Confidence            368999999985210000  00   01 12456765   4578899999999999999875444333    467788888


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRK  112 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~  112 (116)
                      +.++..|.    .+++++.+||.+||..||++||||++|+..|.+
T Consensus       217 ~~~~~~p~----~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         217 GLRLYRPH----LASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             TCCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             CCCCCCcc----cccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            88777776    788999999999999999999999999988764

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6.2e-25  Score=139.54  Aligned_cols=109  Identities=21%  Similarity=0.424  Sum_probs=83.8

Q ss_pred             eeecCCCCCCHHHH---HH-HHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEI---VE-SVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~---~~-~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~~   70 (116)
                      .+||+|||+++...   .. .......+.+||.   ..|+.++||||||+++||+..+..|+|.    .++...+.++.+
T Consensus       165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~  244 (309)
T d1fvra_         165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR  244 (309)
T ss_dssp             CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred             ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCC
Confidence            58999999985211   00 1111234566765   4578899999999999999887766553    367777888887


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +..|.    .+++++.+||.+||+.||++||++.+|+..|+++.
T Consensus       245 ~~~~~----~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~  284 (309)
T d1fvra_         245 LEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  284 (309)
T ss_dssp             CCCCT----TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCc----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            66665    79999999999999999999999999999998875

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.1e-25  Score=141.05  Aligned_cols=110  Identities=22%  Similarity=0.388  Sum_probs=78.9

Q ss_pred             eeecCCCCCCHHHHH--HHH----hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV--ESV----RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~----~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~~~~l~   66 (116)
                      ++||+|||+++....  ...    ..| ..+.+||.   ..++.++||||||+++||+.++..+.|.     ..+...+.
T Consensus       172 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~  251 (299)
T d1ywna1         172 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK  251 (299)
T ss_dssp             CEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHH
T ss_pred             cEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            689999999863110  000    012 23667775   4578899999999999998876655442     35667777


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .+.++..|.    .+++++.+||.+||+.||++|||+.+|+..|+.+.+
T Consensus       252 ~~~~~~~~~----~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         252 EGTRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             HTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCCCCCCCc----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            888766665    688999999999999999999999999999998865

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4e-24  Score=134.52  Aligned_cols=109  Identities=22%  Similarity=0.360  Sum_probs=82.4

Q ss_pred             eeecCCCCCCHHHHHH----H-HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVE----S-VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~----~-~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      ++||+|||+++.....    . ...| ..+.+||.   ..++.++||||||+++||+.++++|.+.    .+++..+..+
T Consensus       151 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~  230 (285)
T d1fmka3         151 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG  230 (285)
T ss_dssp             CEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT
T ss_pred             cEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhc
Confidence            6899999998632111    1 1112 24567775   4578899999999999999988777554    3677778877


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+...|.    .+++++.+||.+||+.||++||++++|+..|+.+.
T Consensus       231 ~~~~~~~----~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~  272 (285)
T d1fmka3         231 YRMPCPP----ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  272 (285)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             CCCCCCc----ccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence            7655554    79999999999999999999999999999888754

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=6.7e-25  Score=138.20  Aligned_cols=110  Identities=23%  Similarity=0.421  Sum_probs=84.3

Q ss_pred             eeecCCCCCCHHHHHHH-----HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcC
Q psy12612          2 RVELSDLRILRDEIVES-----VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-----~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~   68 (116)
                      ++||+|||+++......     ...|. .+.+||.   ..|+.++||||||+++||+.+++.|.+.    .++...+..+
T Consensus       153 ~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~  232 (287)
T d1opja_         153 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD  232 (287)
T ss_dssp             CEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT
T ss_pred             cEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC
Confidence            68999999986311000     01122 3567775   4578899999999999999887777553    3566777778


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      .++..|.    .+++++.+||.+||+.||++|||+.+|+..|+.+.+
T Consensus       233 ~~~~~~~----~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         233 YRMERPE----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             CCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             CCCCCCc----cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            7766665    789999999999999999999999999999987653

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=5.3e-25  Score=140.03  Aligned_cols=111  Identities=21%  Similarity=0.420  Sum_probs=83.3

Q ss_pred             CeeecCCCCCCHHHHHHHH-----h---cC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHH
Q psy12612          1 MRVELSDLRILRDEIVESV-----R---KG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVES   64 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~~~~~-----~---~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~   64 (116)
                      +.+||+|||+++.......     .   .| ..+.+|+.   ..++.++||||||+++||+.+++.|++.    .++...
T Consensus       167 ~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~  246 (311)
T d1r0pa_         167 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY  246 (311)
T ss_dssp             CCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHH
T ss_pred             CCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence            3689999999863211100     0   01 12455664   3578899999999999999988887654    245667


Q ss_pred             HhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhhc
Q psy12612         65 VRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLNK  115 (116)
Q Consensus        65 l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~~  115 (116)
                      +..|.++..|.    .+++++.+||.+||+.||++||++.+|+..|+.+.+
T Consensus       247 i~~g~~~~~p~----~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         247 LLQGRRLLQPE----YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             HHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCcc----cCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            77888776665    789999999999999999999999999999988753

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.8e-24  Score=138.19  Aligned_cols=106  Identities=25%  Similarity=0.367  Sum_probs=79.5

Q ss_pred             eeecCCCCCCHHHHHHH--H----hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCC-CCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIVES--V----RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPS-ERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~----~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~-~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||+++......  .    ..| ..+++||.   ..|+.++||||||+++||+.+. ..|+..    ..+...+.
T Consensus       202 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~  281 (325)
T d1rjba_         202 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ  281 (325)
T ss_dssp             EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH
T ss_pred             eEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            69999999986321100  0    011 24677875   4578899999999999999874 544321    34556677


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIR  111 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~  111 (116)
                      .+.++..|.    .+++++.+||.+||+.||++||||++|++.|.
T Consensus       282 ~~~~~~~p~----~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         282 NGFKMDQPF----YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             TTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cCCCCCCCC----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            777766665    78999999999999999999999999999885

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.1e-24  Score=133.32  Aligned_cols=108  Identities=19%  Similarity=0.443  Sum_probs=76.6

Q ss_pred             eeecCCCCCCHHHH--------HHHHhcCCCCCCCCc---CcccCHHHHHHHHHHhcccCCC-CCCCCh---HHHHHHH-
Q psy12612          2 RVELSDLRILRDEI--------VESVRKGEKCLRPNL---SELTCEEEVTAIMKRCWNEDPS-ERPDFT---TEIVESV-   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~--------~~~~~~g~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~-~~p~~~---~~~~~~l-   65 (116)
                      +|||+|||+++.-.        .........+.+|+.   ..++.++||||||+++||+.++ ..|...   .++...+ 
T Consensus       149 ~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~  228 (273)
T d1u46a_         149 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID  228 (273)
T ss_dssp             EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH
T ss_pred             ceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHH
Confidence            68999999986310        011111223556765   3478889999999999999874 444322   2455555 


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      ..+.++..|.    .++.++.+|+.+||+.||++||||.+|.+.|+..
T Consensus       229 ~~~~~~~~~~----~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         229 KEGERLPRPE----DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             TSCCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hCCCCCCCcc----cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            4455555554    7899999999999999999999999999988764

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.7e-24  Score=135.06  Aligned_cols=110  Identities=19%  Similarity=0.383  Sum_probs=82.6

Q ss_pred             CeeecCCCCCCHHHHHH----HHhc--C-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHh
Q psy12612          1 MRVELSDLRILRDEIVE----SVRK--G-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVR   66 (116)
Q Consensus         1 ~~vKi~Dfgls~~~~~~----~~~~--g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~   66 (116)
                      .++||+|||+++.....    ....  | ..+.+|+.   ..++.++||||||+++||+.++..+++.    .++...+.
T Consensus       170 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~  249 (308)
T d1p4oa_         170 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM  249 (308)
T ss_dssp             CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH
T ss_pred             ceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            36999999999632110    0111  1 23555654   3467899999999999999887655543    36777788


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ++.++..|.    .++..+.+||.+||+.+|++|||+.+|+..|++..
T Consensus       250 ~~~~~~~p~----~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~  293 (308)
T d1p4oa_         250 EGGLLDKPD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  293 (308)
T ss_dssp             TTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             hCCCCCCcc----cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            888766665    78999999999999999999999999999887653

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.8e-23  Score=131.34  Aligned_cols=109  Identities=21%  Similarity=0.427  Sum_probs=82.5

Q ss_pred             eeecCCCCCCHHHHHHHH------hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc
Q psy12612          2 RVELSDLRILRDEIVESV------RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~------~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~   67 (116)
                      .+||+|||+++.......      ..| ..+.+|+.   ..|+.++||||||+++||+.+++.+.|.    .++...+..
T Consensus       173 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~  252 (299)
T d1fgka_         173 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE  252 (299)
T ss_dssp             CEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT
T ss_pred             CeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHc
Confidence            589999999863211000      001 13456664   4588999999999999999876555443    367777888


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         68 GEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        68 ~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      +.++..|.    .+++++.+||.+||+.||.+|||+.+|++.|+.+.
T Consensus       253 ~~~~~~p~----~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         253 GHRMDKPS----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             TCCCCCCS----SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCc----cchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence            88766665    78899999999999999999999999999998874

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2e-22  Score=128.04  Aligned_cols=109  Identities=26%  Similarity=0.423  Sum_probs=80.7

Q ss_pred             eeecCCCCCCHHHHH--HHHhcC-----CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh-----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV--ESVRKG-----EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT-----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~--~~~~~g-----~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~-----~~~~~~l~   66 (116)
                      ++||+|||+++....  .....+     ..+.+|+.   ..++.++||||||+++||+.+.+.|.+.     ..+...+.
T Consensus       183 ~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~  262 (311)
T d1t46a_         183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK  262 (311)
T ss_dssp             EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHH
T ss_pred             cccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            589999999863110  001111     12455664   3468899999999999999886666543     24556677


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      .+.++..|.    .++.++.+||.+||+.||++||||.+|+..|+++.
T Consensus       263 ~~~~~~~~~----~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i  306 (311)
T d1t46a_         263 EGFRMLSPE----HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (311)
T ss_dssp             HTCCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCCCCCcc----cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence            787766665    68899999999999999999999999999998653

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=5.8e-22  Score=123.69  Aligned_cols=103  Identities=17%  Similarity=0.193  Sum_probs=76.0

Q ss_pred             eeecCCCCCCHHHH----HHHHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEI----VESVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~----~~~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++.-.    ......|. .+.+||.   ..|+.++||||||+++||+.++..|...   .++...+..+..
T Consensus       152 ~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~  231 (269)
T d2java1         152 NVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF  231 (269)
T ss_dssp             CEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC
T ss_pred             cEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC
Confidence            68999999986411    11111232 4678885   3578899999999999999988877433   356667776664


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ...|.    .+++++.+|+.+||..||.+|||+.+|++
T Consensus       232 ~~~~~----~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         232 RRIPY----RYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCc----ccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            43443    68899999999999999999999999864

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=1.6e-20  Score=118.96  Aligned_cols=106  Identities=14%  Similarity=0.147  Sum_probs=70.5

Q ss_pred             eeecCCCCCCHHHHHHHH---hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESV---RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||+++.......   ..|. .+++||.   ..|+.++||||+|+++|++..+..|+..   .++...+..+...
T Consensus       148 ~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~  227 (307)
T d1a06a_         148 KIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE  227 (307)
T ss_dssp             CEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCC
T ss_pred             eEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC
Confidence            689999999964221111   1132 4678886   3578999999999999999998887543   3555666655442


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+... ..+++++.+|+.+||..||++|||+.+++.
T Consensus       228 ~~~~~~-~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         228 FDSPYW-DDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             CCTTTT-TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCccc-cCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            222211 258899999999999999999999999875

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2e-21  Score=122.99  Aligned_cols=110  Identities=17%  Similarity=0.309  Sum_probs=71.1

Q ss_pred             eeecCCCCCCHHHH--------HHHHhcC-CCCCCCCcC---------cccCHHHHHHHHHHhcccCCCCCCC-------
Q psy12612          2 RVELSDLRILRDEI--------VESVRKG-EKCLRPNLS---------ELTCEEEVTAIMKRCWNEDPSERPD-------   56 (116)
Q Consensus         2 ~vKi~Dfgls~~~~--------~~~~~~g-~~~~~p~~~---------~~~~~~dv~s~g~~~we~~~~~~p~-------   56 (116)
                      ++||+|||+++...        ......| ..+.+||+.         .++.++||||||+++||+.++..|+       
T Consensus       146 ~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~  225 (303)
T d1vjya_         146 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ  225 (303)
T ss_dssp             CEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCC
T ss_pred             CeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccc
Confidence            68999999985210        0111112 246677751         2567899999999999976543221       


Q ss_pred             ---C--------hHHHHHHHhc-CCCCCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         57 ---F--------TTEIVESVRK-GEKCLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        57 ---~--------~~~~~~~l~~-~~~~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                         .        ...+...+.. +.   +|.++.    ..+...+.+||.+||..||++||||.+|+..|+.+.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~  296 (303)
T d1vjya_         226 LPYYDLVPSDPSVEEMRKVVCEQKL---RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHTTSCC---CCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cchhhcccccchHHHHHHHHhcccc---CCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence               1        0122222222 32   333322    235567999999999999999999999999998875

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.9e-21  Score=120.57  Aligned_cols=104  Identities=20%  Similarity=0.238  Sum_probs=75.2

Q ss_pred             eeecCCCCCCHHHHHHHH--hcCC-CCCCCCc--CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVESV--RKGE-KCLRPNL--SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g~-~~~~p~~--~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~~~~~~   72 (116)
                      ++||+|||+++.......  ..|. .+++||.  ..|+.++||||+|+++|++.++..|+..    .++...+..+..+.
T Consensus       153 ~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~  232 (270)
T d1t4ha_         153 SVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA  232 (270)
T ss_dssp             CEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG
T ss_pred             CEEEeecCcceeccCCccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCc
Confidence            689999999963111111  1132 4678886  4588999999999999999998887532    35556666655322


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .  + ...+++++.+||.+||..||++|||+.+|+.
T Consensus       233 ~--~-~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         233 S--F-DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             G--G-GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             c--c-CccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            1  1 1257788999999999999999999999864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=1.2e-21  Score=124.33  Aligned_cols=104  Identities=17%  Similarity=0.249  Sum_probs=73.9

Q ss_pred             eeecCCCCCCHHHHHHHHhcCC-CCCCCCc------CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESVRKGE-KCLRPNL------SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~~~g~-~~~~p~~------~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||++..........|. .+++||+      ..|+.++||||||+++||+..+..|...   .+.+..+..+.. 
T Consensus       153 ~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~-  231 (309)
T d1u5ra_         153 LVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-  231 (309)
T ss_dssp             EEEECCCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-
T ss_pred             CEEEeecccccccCCCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC-
Confidence            6899999998632111111232 3677875      2378899999999999999998888653   244444444443 


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                        |.+....+++++.+||.+||..||.+|||+.+++.
T Consensus       232 --~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         232 --PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             --CCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             --CCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence              22222368899999999999999999999999864

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.7e-20  Score=117.93  Aligned_cols=105  Identities=12%  Similarity=0.198  Sum_probs=73.7

Q ss_pred             eeecCCCCCCHHHH--HHHHh--cCC-CCCCCCc--------CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEI--VESVR--KGE-KCLRPNL--------SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~--~~~~~--~g~-~~~~p~~--------~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||++....  .....  .|. .+.+||+        ..|+.++||||+|+++|++.++..|...   .++...+
T Consensus       148 ~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i  227 (288)
T d2jfla1         148 DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI  227 (288)
T ss_dssp             CEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH
T ss_pred             CEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHH
Confidence            68999999985211  11111  232 3677774        2367899999999999999988777533   2455555


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+..... .. +..+++++.+||.+||+.||++|||+.+|+.
T Consensus       228 ~~~~~~~~-~~-~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         228 AKSEPPTL-AQ-PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             HHSCCCCC-SS-GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HcCCCCCC-Cc-cccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            55543111 11 1268899999999999999999999999865

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.5e-20  Score=115.85  Aligned_cols=102  Identities=15%  Similarity=0.188  Sum_probs=73.9

Q ss_pred             eeecCCCCCCHHHHHHH--HhcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCC
Q psy12612          2 RVELSDLRILRDEIVES--VRKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCL   72 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~   72 (116)
                      ++||+|||++.......  ...| ..+.+||.   ..|+.++||||||+++|++..+..|...   .++...+.++.. .
T Consensus       144 ~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~-~  222 (263)
T d2j4za1         144 ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-T  222 (263)
T ss_dssp             CEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC-C
T ss_pred             CEeecccceeeecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-C
Confidence            68999999985211000  0012 23667775   3478899999999999999998887543   355566655442 2


Q ss_pred             CCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         73 RPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        73 ~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .|.    .+++++.+|+.+||..||++|||+.++++
T Consensus       223 ~p~----~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         223 FPD----FVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             CCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCc----cCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            233    68899999999999999999999999975

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=7.4e-20  Score=115.28  Aligned_cols=105  Identities=12%  Similarity=0.111  Sum_probs=71.1

Q ss_pred             eeecCCCCCCHHHHHHH----HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++.-....    ...|. .+.+||.   ..|+.++||||+|+++|++.++..|+..   .+.+..+..+..
T Consensus       154 ~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~  233 (293)
T d1yhwa1         154 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT  233 (293)
T ss_dssp             CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS
T ss_pred             cEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCC
Confidence            68999999986310000    01122 3567775   3478999999999999999998877543   233333333222


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      . .... +..+++++.+|+.+||..||++|||+.+++.
T Consensus       234 ~-~~~~-~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         234 P-ELQN-PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             C-CCSS-GGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             C-CCCC-cccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1 1111 1268899999999999999999999999864

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.75  E-value=1.6e-20  Score=118.46  Aligned_cols=111  Identities=14%  Similarity=0.116  Sum_probs=71.1

Q ss_pred             eeecCCCCCCHHHHHHHH-----------hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHH
Q psy12612          2 RVELSDLRILRDEIVESV-----------RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVE   63 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-----------~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~   63 (116)
                      +|||+|||+++.-.....           ..| ..+.+||.   ..++.++||||||+++||+.++..|...   .....
T Consensus       144 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~  223 (299)
T d1ckia_         144 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  223 (299)
T ss_dssp             CEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC------
T ss_pred             eeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHH
Confidence            589999999862100000           012 23556664   2478899999999999999888777532   11111


Q ss_pred             HH----hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHh
Q psy12612         64 SV----RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKL  113 (116)
Q Consensus        64 ~l----~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~  113 (116)
                      .+    ........+.+. ..+|+++.++|..||+.+|++||++.+|.+.|+.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~-~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         224 KYERISEKKMSTPIEVLC-KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             -HHHHHHHHHHSCHHHHT-TTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHhhcccCCCChhHhc-cCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            11    111111111111 26889999999999999999999999998888765

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.2e-20  Score=116.35  Aligned_cols=106  Identities=13%  Similarity=0.135  Sum_probs=74.1

Q ss_pred             eeecCCCCCCHHHHHH-HH--hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVE-SV--RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~-~~--~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||++...... ..  ..|. .+.+||.   ..++.++||||+|+++|++.++..|...   .++...+..+...
T Consensus       155 ~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~  234 (293)
T d1jksa_         155 RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE  234 (293)
T ss_dssp             CEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCC
T ss_pred             ceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC
Confidence            5899999998531100 00  0111 3567775   3478999999999999999998887543   3555666655432


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+..+ ..++.++.+|+.+||..||++|||+.+++.
T Consensus       235 ~~~~~~-~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         235 FEDEYF-SNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             CCHHHH-TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCchhc-CCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            221111 257888999999999999999999999865

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.9e-18  Score=109.12  Aligned_cols=104  Identities=15%  Similarity=0.252  Sum_probs=70.2

Q ss_pred             eeecCCCCCCHHHHHHH--HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HH-----------
Q psy12612          2 RVELSDLRILRDEIVES--VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EI-----------   61 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~-----------   61 (116)
                      ++||+|||+++......  ...|. .+.+||+   ..|+.++||||+|+++||+..+..|....   +.           
T Consensus       143 ~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~  222 (322)
T d1s9ja_         143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD  222 (322)
T ss_dssp             CEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------
T ss_pred             CEEEeeCCCccccCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCC
Confidence            68999999998532211  11233 3677876   35889999999999999998887775320   00           


Q ss_pred             -------------------------------HHHHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         62 -------------------------------VESVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        62 -------------------------------~~~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                                     ...+...   ..|.++....+.++.+|+.+||..||.+|||+.+++.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         223 AAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNE---PPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  297 (322)
T ss_dssp             -----------------------CCCCHHHHHHHHHTS---CCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccCCcccccccccccccccccccchhHHHHHhhhhcc---CCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence                                           0001111   1222222346678999999999999999999999965

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4.2e-19  Score=111.56  Aligned_cols=101  Identities=12%  Similarity=0.093  Sum_probs=72.6

Q ss_pred             eeecCCCCCCHH----HHHHH--HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcC
Q psy12612          2 RVELSDLRILRD----EIVES--VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKG   68 (116)
Q Consensus         2 ~vKi~Dfgls~~----~~~~~--~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~   68 (116)
                      ++||+|||+++.    .....  ...|. .+.+||+   ..|+.++||||+|+++|++..+..|+..   .++...+.++
T Consensus       146 ~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~  225 (288)
T d1uu3a_         146 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL  225 (288)
T ss_dssp             CEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT
T ss_pred             eEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC
Confidence            689999999852    11111  11233 4678886   3578899999999999999988877543   3555666555


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHH
Q psy12612         69 EKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLK  107 (116)
Q Consensus        69 ~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~  107 (116)
                      .. ..|.    .+++++.+|+.+||..||++|||+.|+.
T Consensus       226 ~~-~~p~----~~s~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         226 EY-DFPE----KFFPKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             CC-CCCT----TCCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             CC-CCCc----cCCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence            42 2233    6889999999999999999999998864

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.8e-19  Score=112.40  Aligned_cols=104  Identities=17%  Similarity=0.144  Sum_probs=68.8

Q ss_pred             eeecCCCCCCHHHHH---HHH---hcCC-CCCCCCc---Ccc-cCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHh
Q psy12612          2 RVELSDLRILRDEIV---ESV---RKGE-KCLRPNL---SEL-TCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~---~~~---~~g~-~~~~p~~---~~~-~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~   66 (116)
                      ++||+|||+++.-..   ...   ..|. .+++||.   ..+ +.++||||+|+++|++.++..|...    ........
T Consensus       141 ~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~  220 (271)
T d1nvra_         141 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK  220 (271)
T ss_dssp             CEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHH
T ss_pred             CEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHh
Confidence            689999999852100   000   1122 3678885   234 4678999999999999888777432    12223333


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .......+   ...+++++.+|+.+||+.||++|||+.+++.
T Consensus       221 ~~~~~~~~---~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         221 EKKTYLNP---WKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             TTCTTSTT---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cCCCCCCc---cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            32221111   1257889999999999999999999999864

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.72  E-value=2.4e-19  Score=115.33  Aligned_cols=106  Identities=12%  Similarity=0.096  Sum_probs=74.0

Q ss_pred             eeecCCCCCCHHHHHHH---HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVES---VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||+++.-....   ...|. .+++||+   ..|+.++||||+|+++|++.++..|...   .+++..+..+...
T Consensus       164 ~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~  243 (350)
T d1koaa2         164 ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN  243 (350)
T ss_dssp             CEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             eEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence            58999999985310000   01122 4667876   3478899999999999999988877532   3556666555432


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+.. ...+++++.+|+.+||..||++|||+.+++.
T Consensus       244 ~~~~~-~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         244 MDDSA-FSGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             SCCGG-GGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCccc-ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            22211 1257789999999999999999999999875

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.72  E-value=1.7e-19  Score=116.11  Aligned_cols=106  Identities=11%  Similarity=0.113  Sum_probs=73.8

Q ss_pred             eeecCCCCCCHHHHHHHH---hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVESV---RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      +|||+|||++........   ..|. .+.+||+   ..|+.++||||+|+++|++..+..|+..   .+++..+..+...
T Consensus       167 ~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~  246 (352)
T d1koba_         167 SVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE  246 (352)
T ss_dssp             CEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC
T ss_pred             eEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence            689999999853110000   1122 3556765   3478899999999999999998877543   3555566555432


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+... ..+++++.+||.+||..||.+|||+.+++.
T Consensus       247 ~~~~~~-~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         247 FDEDAF-SSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             CCSSTT-TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCcccc-cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            221111 258899999999999999999999999864

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.1e-18  Score=110.32  Aligned_cols=107  Identities=10%  Similarity=0.129  Sum_probs=68.9

Q ss_pred             eeecCCCCCCHHHHHH---HHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH---HHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVE---SVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT---EIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~---~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~---~~~~~l~~~~~~   71 (116)
                      ++||+|||+++.....   ....|. .+.+||+   ..|+.++||||+|+++|++.++..|+...   +....+......
T Consensus       152 ~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~  231 (335)
T d2ozaa1         152 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM  231 (335)
T ss_dssp             CEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCS
T ss_pred             cccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhc
Confidence            5899999998521100   001122 3667886   34789999999999999999988775431   222222221111


Q ss_pred             CCCCCC---ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLS---ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~---~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ....++   ...+++++.+|+.+|+..||++|||+.+++.
T Consensus       232 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         232 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             CSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            111121   1257788999999999999999999999865

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=6.3e-19  Score=109.95  Aligned_cols=99  Identities=16%  Similarity=0.198  Sum_probs=69.0

Q ss_pred             eeecCCCCCCHHHHHHHH--hcCC-CCCCCCc---Ccc-cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCCC
Q psy12612          2 RVELSDLRILRDEIVESV--RKGE-KCLRPNL---SEL-TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRP   74 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~--~~g~-~~~~p~~---~~~-~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~p   74 (116)
                      ++||+|||++........  ..|. .+.+||+   ..+ +.++||||+|+++|++..+..|....   ..+..+....++
T Consensus       149 ~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~---~~i~~~~~~~~~  225 (273)
T d1xwsa_         149 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---EEIIRGQVFFRQ  225 (273)
T ss_dssp             EEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH---HHHHHCCCCCSS
T ss_pred             eEEECccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc---hHHhhcccCCCC
Confidence            689999999852110000  1122 3567775   223 45689999999999999988886542   223333332222


Q ss_pred             CCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         75 SLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        75 ~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                           .+++++.+|+.+||..||++|||+.+++.
T Consensus       226 -----~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         226 -----RVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             -----CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -----CCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                 58899999999999999999999999865

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.67  E-value=2.6e-18  Score=107.42  Aligned_cols=106  Identities=12%  Similarity=0.092  Sum_probs=70.6

Q ss_pred             eeecCCCCCCHHHHHHHH---hcCC-CCCCCCc---------CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDEIVESV---RKGE-KCLRPNL---------SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g~-~~~~p~~---------~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||++..-.....   ..|. .+.+|+.         ..++.++||||+|+++|++..+..|...   ..+...+
T Consensus       148 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i  227 (277)
T d1phka_         148 NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI  227 (277)
T ss_dssp             CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHH
Confidence            689999999852100000   0111 2334543         2357899999999999999998877543   2445555


Q ss_pred             hcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ..+....... ....+++++.+|+.+||..||++||++.+++.
T Consensus       228 ~~~~~~~~~~-~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         228 MSGNYQFGSP-EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             HHTCCCCCTT-TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HhCCCCCCCc-ccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            5554321111 11268899999999999999999999999864

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=4.1e-18  Score=108.21  Aligned_cols=102  Identities=14%  Similarity=0.147  Sum_probs=73.5

Q ss_pred             eeecCCCCCCHHHHH-HHHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIV-ESVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-~~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~   73 (116)
                      ++||+|||+++.... .....|. .+++||.   ..|+.++||||+|+++|++.++..|...   .++...+..+... .
T Consensus       142 ~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~-~  220 (316)
T d1fota_         142 HIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELR-F  220 (316)
T ss_dssp             CEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCC-C
T ss_pred             CEEEecCccceEeccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCC-C
Confidence            689999999853110 0001132 4677876   3478899999999999999998888543   3555666655432 2


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      |.    .+++++.+++.+||..||.+|+     +.++|+.
T Consensus       221 p~----~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         221 PP----FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             CT----TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CC----CCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            32    5788999999999999999996     7888754

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.66  E-value=4.2e-18  Score=109.48  Aligned_cols=102  Identities=15%  Similarity=0.201  Sum_probs=72.8

Q ss_pred             eeecCCCCCCHHHHH-HHHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCCCC
Q psy12612          2 RVELSDLRILRDEIV-ESVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKCLR   73 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~-~~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~~~   73 (116)
                      ++||+|||+++.... .....|. .+++||+   ..|+.++||||+|+++|++.++..|+..   .++...+..+... .
T Consensus       179 ~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~-~  257 (350)
T d1rdqe_         179 YIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-F  257 (350)
T ss_dssp             CEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-C
T ss_pred             CEEeeeceeeeecccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCC-C
Confidence            689999999863100 0001122 3667775   3478899999999999999998888543   3455556555422 2


Q ss_pred             CCCCccchHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q psy12612         74 PSLSELTCEEEVTAIMKRCWNEDPSERP-----DFTTLKA  108 (116)
Q Consensus        74 p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-----~~~~i~~  108 (116)
                      |.    .+++++.+|+.+||..||.+|+     ++.+|+.
T Consensus       258 p~----~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             CT----TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             Cc----cCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            33    6889999999999999999994     8888864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.66  E-value=5e-18  Score=109.66  Aligned_cols=103  Identities=15%  Similarity=0.134  Sum_probs=68.1

Q ss_pred             eeecCCCCCCHHHHHHH--HhcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc--CC
Q psy12612          2 RVELSDLRILRDEIVES--VRKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK--GE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~--~~   69 (116)
                      ++||+|||+++.-....  ...|. .+.+||.    ..|+.++||||+|+++|++.++..|+..   .........  ..
T Consensus       145 ~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~  224 (364)
T d1omwa3         145 HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM  224 (364)
T ss_dssp             CEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSC
T ss_pred             cEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC
Confidence            68999999986311000  01122 3567774    2378899999999999999988877532   111121221  11


Q ss_pred             CCCCCCCCccchHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q psy12612         70 KCLRPSLSELTCEEEVTAIMKRCWNEDPSERPD-----FTTLKA  108 (116)
Q Consensus        70 ~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~-----~~~i~~  108 (116)
                      ....|.    .+++++.+||.+||..||.+||+     +++|+.
T Consensus       225 ~~~~~~----~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         225 AVELPD----SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             CCCCCS----SSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             CCCCCC----CCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            122232    68899999999999999999999     577653

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.3e-17  Score=106.70  Aligned_cols=102  Identities=14%  Similarity=0.222  Sum_probs=72.8

Q ss_pred             eeecCCCCCCHHHHHHH----HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVES----VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++......    ...|. .+.+||+   ..|+.++|+||+|+++||+..+..|...   .++...+..+..
T Consensus       143 ~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~  222 (337)
T d1o6la_         143 HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI  222 (337)
T ss_dssp             CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             CEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCC
Confidence            68999999986321100    01122 3678886   3488999999999999999988777544   345555555442


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPD-----FTTLKA  108 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~-----~~~i~~  108 (116)
                       ..|.    .+++++.+|+.+|+..||.+|++     +.+|+.
T Consensus       223 -~~p~----~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         223 -RFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             -CCCT----TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             -CCCc----cCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence             2233    68889999999999999999995     666653

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.64  E-value=4.7e-18  Score=106.89  Aligned_cols=112  Identities=14%  Similarity=0.100  Sum_probs=73.2

Q ss_pred             eeecCCCCCCHHHHHHH----H-------hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh------HH
Q psy12612          2 RVELSDLRILRDEIVES----V-------RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT------TE   60 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~-------~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~------~~   60 (116)
                      ++||+|||+++......    .       ..| ..+++||.   ..++.++||||||+++||+.++..|...      .+
T Consensus       144 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~  223 (293)
T d1csna_         144 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ  223 (293)
T ss_dssp             CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred             ceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHH
Confidence            58999999985310000    0       012 23566765   3478899999999999999887777531      12


Q ss_pred             HHHHHhcCCC-CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHhh
Q psy12612         61 IVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKAAIRKLN  114 (116)
Q Consensus        61 ~~~~l~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~~l~~~~  114 (116)
                      ....+..... ...+.+. ..+|+++.+++..||..+|++||+++.|...|+++.
T Consensus       224 ~~~~i~~~~~~~~~~~l~-~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~  277 (293)
T d1csna_         224 KYERIGEKKQSTPLRELC-AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL  277 (293)
T ss_dssp             HHHHHHHHHHHSCHHHHT-TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHhccCCCChHHhc-CCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            2222222111 1111111 158899999999999999999999999988887753

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.64  E-value=1.5e-16  Score=99.21  Aligned_cols=111  Identities=17%  Similarity=0.250  Sum_probs=73.9

Q ss_pred             eeecCCCCCCHH----H-HH--HHHhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHH-HHh
Q psy12612          2 RVELSDLRILRD----E-IV--ESVRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVE-SVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~----~-~~--~~~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~-~l~   66 (116)
                      .+||+|||++..    . ..  .....|. .+.+||.   ..++.++||||+|+++|++.++..|+..   .++.. .+.
T Consensus       149 ~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~  228 (277)
T d1o6ya_         149 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR  228 (277)
T ss_dssp             CEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHh
Confidence            579999997631    1 00  1111122 4677875   3478899999999999999998877432   23333 333


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHhh
Q psy12612         67 KGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERP-DFTTLKAAIRKLN  114 (116)
Q Consensus        67 ~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp-~~~~i~~~l~~~~  114 (116)
                      .+...  |......+++++.+++.+||+.||.+|| +++++...|.++.
T Consensus       229 ~~~~~--~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         229 EDPIP--PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             CCCCC--GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             cCCCC--CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            33321  1111126889999999999999999999 8999988887764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.6e-17  Score=105.70  Aligned_cols=101  Identities=12%  Similarity=0.272  Sum_probs=71.6

Q ss_pred             eeecCCCCCCHHHHHHHH----hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCC
Q psy12612          2 RVELSDLRILRDEIVESV----RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEK   70 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~----~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~   70 (116)
                      ++||+|||+++.......    ..|. .+.+||+   ..|+.++||||+|+++|++.++..|..+   .++...+..+..
T Consensus       141 ~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~  220 (320)
T d1xjda_         141 HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP  220 (320)
T ss_dssp             CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             ceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence            689999999853110000    1121 2556765   3578999999999999999998877543   356666665532


Q ss_pred             CCCCCCCccchHHHHHHHHHHhccCCCCCCCCHH-HHH
Q psy12612         71 CLRPSLSELTCEEEVTAIMKRCWNEDPSERPDFT-TLK  107 (116)
Q Consensus        71 ~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~-~i~  107 (116)
                       ..|.    .+++++.+|+.+||..||++||++. +|.
T Consensus       221 -~~p~----~~s~~~~dli~~~L~~dP~~R~s~~~~l~  253 (320)
T d1xjda_         221 -FYPR----WLEKEAKDLLVKLFVREPEKRLGVRGDIR  253 (320)
T ss_dssp             -CCCT----TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             -CCCc----cCCHHHHHHHHHhcccCCCCCcCHHHHHH
Confidence             2233    6889999999999999999999985 563

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=4e-18  Score=108.50  Aligned_cols=106  Identities=8%  Similarity=0.079  Sum_probs=72.0

Q ss_pred             eeecCCCCCCHHHHHHH-H--hcC-CCCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcCCCC
Q psy12612          2 RVELSDLRILRDEIVES-V--RKG-EKCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKGEKC   71 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~--~~g-~~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~~~~   71 (116)
                      ++||+|||+++...... .  ..| ..+.+|+.   ..|+.++||||+|+++|++..+..|+..   .++...+.++...
T Consensus       142 ~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~  221 (321)
T d1tkia_         142 TIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT  221 (321)
T ss_dssp             CEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC
T ss_pred             EEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence            68999999986321100 0  011 12445553   3478899999999999999988877543   3556666655432


Q ss_pred             CCCCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         72 LRPSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        72 ~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .... ....++.++.+|+.+|+..||++|||+.+++.
T Consensus       222 ~~~~-~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         222 FDEE-AFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             CCHH-HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CChh-hccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1110 01247788999999999999999999999975

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.4e-16  Score=99.31  Aligned_cols=107  Identities=9%  Similarity=0.032  Sum_probs=68.9

Q ss_pred             eeecCCCCCCHHHHHHHH---hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc--CC
Q psy12612          2 RVELSDLRILRDEIVESV---RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK--GE   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~--~~   69 (116)
                      ++||+|||+++.......   ..|. .+.+||.   ..|+.++||||+|+++||+..+..|+..   .+.+..+..  +.
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~  233 (305)
T d1blxa_         154 QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL  233 (305)
T ss_dssp             CEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             CeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCC
Confidence            689999999853211111   1122 3567875   4588999999999999999988777532   122222211  00


Q ss_pred             C------------------CCCCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 K------------------CLRPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 ~------------------~~~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .                  .......  ....++++.+|+.+|+..||++|||+.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         234 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            0                  0000000  1246778899999999999999999999865

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.2e-16  Score=100.61  Aligned_cols=107  Identities=8%  Similarity=-0.038  Sum_probs=66.8

Q ss_pred             eeecCCCCCCHHHHHHH--H--hcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcC-
Q psy12612          2 RVELSDLRILRDEIVES--V--RKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKG-   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~--~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~-   68 (116)
                      ++||+|||+++......  .  ..|. .+.+||.    ..|+.++||||+|+++||+..+..|...   .+.+..+.+. 
T Consensus       138 ~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~  217 (299)
T d1ua2a_         138 VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETL  217 (299)
T ss_dssp             CEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred             ccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhc
Confidence            68999999985321100  0  0122 3566774    2368899999999999999887655322   1223222211 


Q ss_pred             -C--C---------------CCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 -E--K---------------CLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 -~--~---------------~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       .  .               ...|..+.    ...++++.+|+.+|+..||++|||+.+++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         218 GTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             CCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence             0  0               00111110    135678999999999999999999999864

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=4e-16  Score=99.18  Aligned_cols=102  Identities=16%  Similarity=0.158  Sum_probs=65.0

Q ss_pred             eeecCCCCCCHHH----HH-HHHhcCC-CCCCCCcC-----cccCHHHHHHHHHHhcccCCCCCCCCh-------HHHHH
Q psy12612          2 RVELSDLRILRDE----IV-ESVRKGE-KCLRPNLS-----ELTCEEEVTAIMKRCWNEDPSERPDFT-------TEIVE   63 (116)
Q Consensus         2 ~vKi~Dfgls~~~----~~-~~~~~g~-~~~~p~~~-----~~~~~~dv~s~g~~~we~~~~~~p~~~-------~~~~~   63 (116)
                      ++||+|||+++.-    .. .....|. .+.+|+..     .++.++||||+|+++|++..+..|+..       ..+..
T Consensus       167 ~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~  246 (322)
T d1vzoa_         167 HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR  246 (322)
T ss_dssp             CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH
T ss_pred             CEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            6899999987421    00 0111122 23445431     256789999999999999888777432       12333


Q ss_pred             HHhcCCCCCCCCCCccchHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q psy12612         64 SVRKGEKCLRPSLSELTCEEEVTAIMKRCWNEDPSERPD-----FTTLKA  108 (116)
Q Consensus        64 ~l~~~~~~~~p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~-----~~~i~~  108 (116)
                      ....+. ...|.    .+++++.+++.+||..||.+||+     .++++.
T Consensus       247 ~~~~~~-~~~~~----~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         247 RILKSE-PPYPQ----EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             HHHHCC-CCCCT----TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             hcccCC-CCCcc----cCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            222222 22232    68899999999999999999995     677753

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.53  E-value=5.1e-15  Score=92.47  Aligned_cols=107  Identities=8%  Similarity=0.035  Sum_probs=65.4

Q ss_pred             eeecCCCCCCHHHHH----HHHhcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc--
Q psy12612          2 RVELSDLRILRDEIV----ESVRKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK--   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~----~~~~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~--   67 (116)
                      .+||+|||++.....    .....|. .+.+|+.    ..++.++||||+|+++||+..+..|..+   .+....+..  
T Consensus       138 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~  217 (286)
T d1ob3a_         138 ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL  217 (286)
T ss_dssp             CEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             CEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhh
Confidence            589999999854211    1111122 2445553    2357899999999999999988766432   122222111  


Q ss_pred             CCC------------------CCCCCCC----ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 GEK------------------CLRPSLS----ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 ~~~------------------~~~p~~~----~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      +..                  ......+    ....+.++.+++.+|+..||++|||++|++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         218 GTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             CCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            000                  0000000    1246678999999999999999999999863

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2.7e-15  Score=94.33  Aligned_cols=107  Identities=11%  Similarity=0.062  Sum_probs=65.2

Q ss_pred             eeecCCCCCCHHHHHHH--H--hcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH-h--
Q psy12612          2 RVELSDLRILRDEIVES--V--RKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV-R--   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~--~--~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l-~--   66 (116)
                      ++||+|||+++......  .  ..|. .+.+||.    ..++.++|+||+|+++|++..+..|...   .+.+..+ .  
T Consensus       140 ~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~  219 (298)
T d1gz8a_         140 AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL  219 (298)
T ss_dssp             CEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             cceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhc
Confidence            58999999986421100  0  0121 2445553    2246789999999999999888777432   1222211 1  


Q ss_pred             -cCCCC-------------CCCCCCc-------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 -KGEKC-------------LRPSLSE-------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 -~~~~~-------------~~p~~~~-------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       .....             ..+....       ...+.++.+|+.+|+..||++|||+.+++.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         220 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             CCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence             10000             0000000       134578899999999999999999999875

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=4.8e-15  Score=93.79  Aligned_cols=107  Identities=9%  Similarity=-0.012  Sum_probs=63.5

Q ss_pred             eeecCCCCCCHHH---HHHHHh-----cCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH
Q psy12612          2 RVELSDLRILRDE---IVESVR-----KGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~---~~~~~~-----~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l   65 (116)
                      ++||+|||+++.-   ......     .|. .+.+||.    ..|+.++||||+|+++|++..+..|...   ......+
T Consensus       155 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i  234 (318)
T d3blha1         155 VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI  234 (318)
T ss_dssp             CEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHH
Confidence            6899999998521   001100     011 2456664    2478899999999999999888766432   1222222


Q ss_pred             hcCCCCCCCCC------------------Cc---------cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 RKGEKCLRPSL------------------SE---------LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~~~~~~~~p~~------------------~~---------~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      ........+..                  ..         ...++++.+||.+|+..||++|||+++++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         235 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             HHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence            11000000000                  00         012446678999999999999999999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=3.1e-15  Score=95.93  Aligned_cols=107  Identities=12%  Similarity=-0.015  Sum_probs=65.7

Q ss_pred             eeecCCCCCCHHHHHHHH---hcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHh----
Q psy12612          2 RVELSDLRILRDEIVESV---RKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVR----   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~----   66 (116)
                      .+||+|||++........   ..|. .+.+|+.    ..|+.++||||+|+++||+..+..|+..   .+.+..+.    
T Consensus       161 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g  240 (350)
T d1q5ka_         161 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG  240 (350)
T ss_dssp             CEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHC
T ss_pred             ceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhC
Confidence            689999999853111000   0111 2445553    3478999999999999999887766422   11111111    


Q ss_pred             -----------cCC-CCCCCCC--------CccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 -----------KGE-KCLRPSL--------SELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 -----------~~~-~~~~p~~--------~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                 ... ....+..        .....++++.+|+.+|+..||++|||+.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         241 TPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             CCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                       000 0000100        01146788999999999999999999999874

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.3e-14  Score=90.61  Aligned_cols=107  Identities=10%  Similarity=0.082  Sum_probs=65.4

Q ss_pred             eeecCCCCCCHHHHHHH----HhcCCC-CCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHHhc-
Q psy12612          2 RVELSDLRILRDEIVES----VRKGEK-CLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESVRK-   67 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~----~~~g~~-~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l~~-   67 (116)
                      ++||+|||++.......    ...+.. ..+|+.    ..++.++||||+|+++||+..+..|.+.    .+....+.. 
T Consensus       139 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~  218 (292)
T d1unla_         139 ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL  218 (292)
T ss_dssp             CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHH
T ss_pred             ceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhh
Confidence            68999999985311000    000111 223332    1257899999999999999999988653    122222221 


Q ss_pred             -CCCC--------------------CCCCC--CccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         68 -GEKC--------------------LRPSL--SELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        68 -~~~~--------------------~~p~~--~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                       +...                    .....  .....++++.+|+.+|+..||.+|||++|++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         219 LGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             1000                    00000  00145678899999999999999999999864

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=8.7e-15  Score=93.59  Aligned_cols=107  Identities=9%  Similarity=0.007  Sum_probs=66.2

Q ss_pred             eeecCCCCCCHHHHHHH-HhcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhc--C--
Q psy12612          2 RVELSDLRILRDEIVES-VRKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRK--G--   68 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~--~--   68 (116)
                      ++||+|||+++...... ...|. .+.+||.    ..++.++||||+|+++|++..+..|...   ...+.....  +  
T Consensus       159 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~  238 (346)
T d1cm8a_         159 ELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP  238 (346)
T ss_dssp             CEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred             ccccccccceeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCC
Confidence            68999999986311000 00111 2456764    2357899999999999999888776432   111111110  0  


Q ss_pred             --------------------CCCCCCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         69 --------------------EKCLRPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        69 --------------------~~~~~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                          .......+.  ...+++++.+|+.+|+..||++|||+.+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~  300 (346)
T d1cm8a_         239 PAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  300 (346)
T ss_dssp             CHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                                000111111  0246678899999999999999999999975

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=5.8e-14  Score=89.78  Aligned_cols=107  Identities=7%  Similarity=-0.014  Sum_probs=64.9

Q ss_pred             eeecCCCCCCHHHHHHHH-------hcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHH-
Q psy12612          2 RVELSDLRILRDEIVESV-------RKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESV-   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-------~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l-   65 (116)
                      ++||+|||++........       ..|. .+.+|++    ..++.++||||+|+++|++..+..|...   ....... 
T Consensus       147 ~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~  226 (345)
T d1pmea_         147 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL  226 (345)
T ss_dssp             CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHh
Confidence            689999999852111100       0111 2456664    2367889999999999999888766432   0111110 


Q ss_pred             h-----------------------cCCCCCCCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 R-----------------------KGEKCLRPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ~-----------------------~~~~~~~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      .                       .-.........  ....+.++.+|+.+|+..||.+|||+.+++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~  294 (345)
T d1pmea_         227 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  294 (345)
T ss_dssp             HHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0                       00000000000  0135567899999999999999999999875

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.35  E-value=3.4e-14  Score=90.18  Aligned_cols=107  Identities=13%  Similarity=0.024  Sum_probs=64.8

Q ss_pred             eeecCCCCCCHHHHHHH---HhcCC-CCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh----HHHHHHH----
Q psy12612          2 RVELSDLRILRDEIVES---VRKGE-KCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT----TEIVESV----   65 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~---~~~g~-~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~----~~~~~~l----   65 (116)
                      .+||+|||+++......   ...|. .+.+||.    ..++.++|+||+|+++|++..+..|...    ......+    
T Consensus       168 ~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~  247 (328)
T d3bqca1         168 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL  247 (328)
T ss_dssp             EEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHH
T ss_pred             eeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHH
Confidence            58999999985210000   00011 2446664    2368899999999999998888777432    0110000    


Q ss_pred             ---------hcCCC------------CCC-------CCCCccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         66 ---------RKGEK------------CLR-------PSLSELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        66 ---------~~~~~------------~~~-------p~~~~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                               .....            ..+       +......+++++.+||.+|+..||.+|||++++++
T Consensus       248 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         248 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                     00000            000       00011246678999999999999999999999865

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=4.6e-13  Score=85.82  Aligned_cols=107  Identities=9%  Similarity=-0.011  Sum_probs=61.4

Q ss_pred             eeecCCCCCCHHHHHHHH---hcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHh-----
Q psy12612          2 RVELSDLRILRDEIVESV---RKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVR-----   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~---~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~-----   66 (116)
                      .+|++|||+++.......   ..|. .+.+||.   ..++.++||||+|+++|++..+..|+..   ......+.     
T Consensus       157 ~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~  236 (355)
T d2b1pa1         157 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT  236 (355)
T ss_dssp             CEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred             ceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccC
Confidence            589999999864322111   1122 3556765   3468899999999999998887655321   11111110     


Q ss_pred             -----------------cCC-CCC------------CCCCC--ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 -----------------KGE-KCL------------RPSLS--ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 -----------------~~~-~~~------------~p~~~--~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                       .+. ...            .+...  ....+.++.+|+.+|+..||++|||+++++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             CCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                             000 000            00000  0124567889999999999999999999864

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.7e-13  Score=87.48  Aligned_cols=107  Identities=7%  Similarity=-0.010  Sum_probs=61.3

Q ss_pred             eeecCCCCCCHHHHHHHH-hcC-CCCCCCCc----CcccCHHHHHHHHHHhcccCCCCCCCCh---HHHHHHHhcC--C-
Q psy12612          2 RVELSDLRILRDEIVESV-RKG-EKCLRPNL----SELTCEEEVTAIMKRCWNEDPSERPDFT---TEIVESVRKG--E-   69 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~~-~~g-~~~~~p~~----~~~~~~~dv~s~g~~~we~~~~~~p~~~---~~~~~~l~~~--~-   69 (116)
                      ++|++|||++........ ..| ..+.+|+.    ..++.++||||+|+++|++..+..|+..   ......+...  . 
T Consensus       159 ~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~  238 (348)
T d2gfsa1         159 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP  238 (348)
T ss_dssp             CEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             cccccccchhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            589999999853111000 001 12445553    2247889999999999999888766422   1111111110  0 


Q ss_pred             -------------------CCCCCCCCc----cchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         70 -------------------KCLRPSLSE----LTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        70 -------------------~~~~p~~~~----~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                                         ....+....    ..+++++.+|+.+|+..||.+|||+.+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         239 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             CHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence                               000111110    146678899999999999999999999875

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.18  E-value=1.5e-12  Score=83.36  Aligned_cols=107  Identities=13%  Similarity=0.086  Sum_probs=63.4

Q ss_pred             eeecCCCCCCHHHHHHH-HhcCC-CCCCCCc---CcccCHHHHHHHHHHhcccCCCCCCCChH----------HHHHHHh
Q psy12612          2 RVELSDLRILRDEIVES-VRKGE-KCLRPNL---SELTCEEEVTAIMKRCWNEDPSERPDFTT----------EIVESVR   66 (116)
Q Consensus         2 ~vKi~Dfgls~~~~~~~-~~~g~-~~~~p~~---~~~~~~~dv~s~g~~~we~~~~~~p~~~~----------~~~~~l~   66 (116)
                      .+|++|||.+....... ...|. .+.+||.   ..++.++|+||+|+++|++..+..|+...          .+...+.
T Consensus       170 ~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~  249 (362)
T d1q8ya_         170 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE  249 (362)
T ss_dssp             EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred             eeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHH
Confidence            48999999985321100 00121 2456664   34688999999999999988776663210          0110000


Q ss_pred             c-CC---------------------CCCCCCCC--------------ccchHHHHHHHHHHhccCCCCCCCCHHHHHH
Q psy12612         67 K-GE---------------------KCLRPSLS--------------ELTCEEEVTAIMKRCWNEDPSERPDFTTLKA  108 (116)
Q Consensus        67 ~-~~---------------------~~~~p~~~--------------~~~~~~~l~~l~~~Cw~~~p~~Rp~~~~i~~  108 (116)
                      . |.                     ........              ....++++.+|+.+|+..||.+|||+++++.
T Consensus       250 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~  327 (362)
T d1q8ya_         250 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  327 (362)
T ss_dssp             HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             HhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            0 00                     00000000              0135677899999999999999999999864

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.16  E-value=0.00039  Score=42.78  Aligned_cols=55  Identities=27%  Similarity=0.650  Sum_probs=43.8

Q ss_pred             CCCCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612          8 LRILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus         8 fgls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .+.+..++...+..+.++..|.    +++.+++++...||+.+|.+||++. ++...+++
T Consensus       244 ~~~~~~e~~~~v~~~~~~~~p~----~~~~~~~~li~~cl~~~P~~RPt~~-ev~~~L~~  298 (301)
T d1lufa_         244 YGMAHEEVIYYVRDGNILACPE----NCPLELYNLMRLCWSKLPADRPSFC-SIHRILQR  298 (301)
T ss_dssp             TTSCHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCCCCCCCc----cchHHHHHHHHHHcCCChhHCcCHH-HHHHHHHH
Confidence            3456667777777787766676    7888999999999999999999996 77776654

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.00029  Score=43.15  Aligned_cols=52  Identities=27%  Similarity=0.602  Sum_probs=40.5

Q ss_pred             CCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         10 ILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        10 ls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ++..++...+..|.++..|.    .++.+++.+...||..+|.+||++. ++.+.++
T Consensus       216 ~~~~~~~~~i~~~~~~~~p~----~~~~~l~~li~~cl~~~p~~RPs~~-~i~~~L~  267 (285)
T d1u59a_         216 MKGPEVMAFIEQGKRMECPP----ECPPELYALMSDCWIYKWEDRPDFL-TVEQRMR  267 (285)
T ss_dssp             CCTHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHH-HHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCCCCC----cCCHHHHHHHHHHcCCCHhHCcCHH-HHHHHHH
Confidence            44455666777777766666    7889999999999999999999996 6665554

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00061  Score=41.46  Aligned_cols=53  Identities=28%  Similarity=0.589  Sum_probs=41.2

Q ss_pred             CCCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612          9 RILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus         9 gls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      |++..++...+..|.++..|.    .++.+++.+...||..+|.+||++. ++...+.
T Consensus       213 ~~~~~~~~~~i~~~~~~~~p~----~~~~~~~~li~~cl~~dp~~RPs~~-~i~~~L~  265 (277)
T d1xbba_         213 GMKGSEVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVENRPGFA-AVELRLR  265 (277)
T ss_dssp             TCCHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSTTTSCCHH-HHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCCCCCc----ccCHHHHHHHHHHcCCCHhHCcCHH-HHHHHhh
Confidence            345566667777777766666    7889999999999999999999986 6655443

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00044  Score=41.70  Aligned_cols=52  Identities=31%  Similarity=0.645  Sum_probs=42.6

Q ss_pred             CCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         10 ILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        10 ls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ++..++...+..+.++..|.    .++..++.|...||..+|.+||++. +++..+.
T Consensus       205 ~~~~~~~~~i~~~~~~~~p~----~~~~~l~~li~~cl~~dP~~RPt~~-eil~~L~  256 (258)
T d1k2pa_         205 FTNSETAEHIAQGLRLYRPH----LASEKVYTIMYSCWHEKADERPTFK-ILLSNIL  256 (258)
T ss_dssp             SCHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHH-HHHHHHH
T ss_pred             CCHHHHHHHHHhCCCCCCcc----cccHHHHHHHHHHccCCHhHCcCHH-HHHHHhh
Confidence            45666777787887777777    7788999999999999999999996 7777664

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.86  E-value=0.0015  Score=40.10  Aligned_cols=53  Identities=21%  Similarity=0.632  Sum_probs=41.0

Q ss_pred             CCCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612          9 RILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus         9 gls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      +.+..++...+..+.++..|.    .++.+++.+...||..+|.+||++. +++..+.
T Consensus       236 ~~~~~~~~~~i~~~~~~~~~~----~~~~~l~~li~~cl~~~P~~RPs~~-ei~~~L~  288 (299)
T d1jpaa_         236 DMTNQDVINAIEQDYRLPPPM----DCPSALHQLMLDCWQKDRNHRPKFG-QIVNTLD  288 (299)
T ss_dssp             TCCHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSTTTSCCHH-HHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCCCCCc----cchHHHHHHHHHHcCCCHhHCcCHH-HHHHHHH
Confidence            345556666677777666665    7888999999999999999999986 7766654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.0017  Score=39.50  Aligned_cols=53  Identities=23%  Similarity=0.656  Sum_probs=41.0

Q ss_pred             CCCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612          9 RILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus         9 gls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      +.+..++...+..|.++..|.    .++..++.+...||..+|.+||++. +++..+.
T Consensus       216 ~~~~~~~~~~i~~~~~~~~~~----~~~~~l~~li~~cl~~~p~~RPt~~-eil~~L~  268 (283)
T d1mqba_         216 ELSNHEVMKAINDGFRLPTPM----DCPSAIYQLMMQCWQQERARRPKFA-DIVSILD  268 (283)
T ss_dssp             TCCHHHHHHHHHTTCCCCCCT----TCBHHHHHHHHHHTCSSTTTSCCHH-HHHHHHH
T ss_pred             cCCHHHHHHHHhccCCCCCch----hhHHHHHHHHHHHCcCCHhHCcCHH-HHHHHHH
Confidence            345556666777777666665    7888999999999999999999986 7766554

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.0013  Score=39.57  Aligned_cols=52  Identities=29%  Similarity=0.682  Sum_probs=40.5

Q ss_pred             CCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         10 ILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        10 ls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .+..++...+..+.++..|.    .++.+++.+...||..+|.+||++. +++..++
T Consensus       206 ~~~~~~~~~i~~~~~~~~p~----~~~~~l~~li~~cl~~~p~~Rps~~-~il~~L~  257 (263)
T d1sm2a_         206 RSNSEVVEDISTGFRLYKPR----LASTHVYQIMNHCWKERPEDRPAFS-RLLRQLA  257 (263)
T ss_dssp             CCHHHHHHHHHHTCCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCCcc----ccCHHHHHHHHHHccCCHhHCcCHH-HHHHHHH
Confidence            34455666677777766676    7788999999999999999999986 7776654

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.0017  Score=40.00  Aligned_cols=55  Identities=25%  Similarity=0.660  Sum_probs=43.1

Q ss_pred             CCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCC
Q psy12612         10 ILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGE   69 (116)
Q Consensus        10 ls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~   69 (116)
                      .+..++...+..+.++..|.    .++..++.++..||..+|..||++. +++..+++..
T Consensus       239 ~~~~~~~~~i~~~~~~~~p~----~~~~~l~~li~~cl~~~P~~RPs~~-~il~~L~~~~  293 (308)
T d1p4oa_         239 LSNEQVLRFVMEGGLLDKPD----NCPDMLFELMRMCWQYNPKMRPSFL-EIISSIKEEM  293 (308)
T ss_dssp             SCHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHGGGS
T ss_pred             CCHHHHHHHHHhCCCCCCcc----cchHHHHHHHHHHcCCChhHCcCHH-HHHHHHHHhc
Confidence            45556666666777666665    7788999999999999999999996 8888876543

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.002  Score=39.68  Aligned_cols=52  Identities=35%  Similarity=0.788  Sum_probs=39.8

Q ss_pred             CCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         10 ILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        10 ls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .+..++...+..|.++..|.    +++.++..|...||+.+|.+||++. +++..+.
T Consensus       230 ~~~~~~~~~i~~~~~~~~~~----~~~~~~~~li~~cl~~dP~~RPs~~-eil~~L~  281 (309)
T d1fvra_         230 MTCAELYEKLPQGYRLEKPL----NCDDEVYDLMRQCWREKPYERPSFA-QILVSLN  281 (309)
T ss_dssp             CCHHHHHHHGGGTCCCCCCT----TBCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             CCHHHHHHHHHhcCCCCCCc----cCCHHHHHHHHHHcCCChhHCcCHH-HHHHHHH
Confidence            44555666666777666665    7788999999999999999999996 6766544

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.002  Score=39.82  Aligned_cols=49  Identities=35%  Similarity=0.692  Sum_probs=37.4

Q ss_pred             HHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHH
Q psy12612         12 RDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESV   65 (116)
Q Consensus        12 ~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l   65 (116)
                      ..++...+..|.++..|.    .++.+++.+...||..+|.+||++. +++..+
T Consensus       219 ~~~~~~~i~~~~~~~~p~----~~~~~~~~li~~cl~~dP~~RPs~~-eil~~l  267 (317)
T d1xkka_         219 ASEISSILEKGERLPQPP----ICTIDVYMIMVKCWMIDADSRPKFR-ELIIEF  267 (317)
T ss_dssp             GGGHHHHHHHTCCCCCCT----TBCHHHHHHHHHHTCSSGGGSCCHH-HHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCc----ccCHHHHHHHHHhCCCChhhCcCHH-HHHHHH
Confidence            344555566677666666    7888999999999999999999986 665544

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.0044  Score=37.40  Aligned_cols=51  Identities=29%  Similarity=0.802  Sum_probs=39.0

Q ss_pred             CHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         11 LRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        11 s~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      +..++...+..+.++..|.    .++.++..+...||+.+|.+||++. ++...+.
T Consensus       215 ~~~~~~~~i~~~~~~~~p~----~~~~~l~~li~~cl~~~P~~Rpt~~-ei~~~L~  265 (272)
T d1qpca_         215 TNPEVIQNLERGYRMVRPD----NCPEELYQLMRLCWKERPEDRPTFD-YLRSVLE  265 (272)
T ss_dssp             CHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             CHHHHHHHHHhcCCCCCcc----cChHHHHHHHHHHcCCCHhHCcCHH-HHHHHhh
Confidence            3445556666677666666    7788999999999999999999986 7766543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.0063  Score=37.16  Aligned_cols=51  Identities=29%  Similarity=0.777  Sum_probs=38.6

Q ss_pred             CHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         11 LRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        11 s~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      +..++...+..|.++..|.    .++.++..+...||+.+|.+||++. +++..+.
T Consensus       242 ~~~~~~~~i~~~~~~~~p~----~~~~~l~~li~~cl~~dP~~Rps~~-eil~~L~  292 (299)
T d1fgka_         242 PVEELFKLLKEGHRMDKPS----NCTNELYMMMRDCWHAVPSQRPTFK-QLVEDLD  292 (299)
T ss_dssp             CHHHHHHHHHTTCCCCCCS----SCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCCCc----cchHHHHHHHHHHccCCHhHCcCHH-HHHHHHH
Confidence            3444555666676666665    6778999999999999999999986 7776654

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.017  Score=35.11  Aligned_cols=59  Identities=25%  Similarity=0.598  Sum_probs=41.7

Q ss_pred             HHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhcCCCCCCCC
Q psy12612         12 RDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRKGEKCLRPS   75 (116)
Q Consensus        12 ~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~~~~~~~p~   75 (116)
                      ..++...+..+.+...|.    .++..+..+...||+.+|.+||++. ++...+..-.....|.
T Consensus       220 ~~~~~~~i~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~Rps~~-~i~~~L~~~~~~~~p~  278 (285)
T d1fmka3         220 NREVLDQVERGYRMPCPP----ECPESLHDLMCQCWRKEPEERPTFE-YLQAFLEDYFTSTEPQ  278 (285)
T ss_dssp             HHHHHHHHHTTCCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHTTTSCSCCC
T ss_pred             HHHHHHHHHhcCCCCCCc----ccCHHHHHHHHHHcccCHhHCcCHH-HHHHHHhhhhcCCCCC
Confidence            344555566665544454    6778899999999999999999996 7877776654433343

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0041  Score=37.42  Aligned_cols=52  Identities=35%  Similarity=0.666  Sum_probs=38.7

Q ss_pred             CCHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         10 ILRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        10 ls~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .+..++...+..+.++..|.    .++..++.+...||..+|.+||++. ++.+.+.
T Consensus       204 ~~~~~~~~~i~~~~~~~~~~----~~~~~~~~li~~cl~~dP~~Rps~~-~l~~~L~  255 (262)
T d1byga_         204 IPLKDVVPRVEKGYKMDAPD----GCPPAVYEVMKNCWHLDAAMRPSFL-QLREQLE  255 (262)
T ss_dssp             SCGGGHHHHHTTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCCCCc----cCCHHHHHHHHHHcccCHhHCcCHH-HHHHHHH
Confidence            33445556666666665555    6778899999999999999999996 7766654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.93  E-value=0.0031  Score=38.86  Aligned_cols=46  Identities=26%  Similarity=0.711  Sum_probs=34.8

Q ss_pred             HHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         16 VESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        16 ~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ...+..|.++..|.    .++.+++.+...||..+|.+||++. +++..++
T Consensus       244 ~~~i~~g~~~~~p~----~~~~~l~~li~~cl~~dP~~RPs~~-ei~~~L~  289 (311)
T d1r0pa_         244 TVYLLQGRRLLQPE----YCPDPLYEVMLKCWHPKAEMRPSFS-ELVSRIS  289 (311)
T ss_dssp             HHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             HHHHHcCCCCCCcc----cCcHHHHHHHHHHcCCCHhHCcCHH-HHHHHHH
Confidence            34445566555555    6778999999999999999999996 6666554

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.0051  Score=37.04  Aligned_cols=49  Identities=31%  Similarity=0.788  Sum_probs=35.5

Q ss_pred             HHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         13 DEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        13 ~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      .++...+..+.++..|.    .++.++..+...||..+|.+||++. ++...+.
T Consensus       216 ~~~~~~i~~~~~~~~~~----~~~~~~~~li~~cl~~dp~~Rps~~-ei~~~L~  264 (273)
T d1mp8a_         216 NDVIGRIENGERLPMPP----NCPPTLYSLMTKCWAYDPSRRPRFT-ELKAQLS  264 (273)
T ss_dssp             GGHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCC----CCCHHHHHHHHHHcCCCHhHCcCHH-HHHHHHH
Confidence            34445555555544444    6778999999999999999999985 6666553

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.82  E-value=0.0088  Score=36.35  Aligned_cols=52  Identities=33%  Similarity=0.680  Sum_probs=39.5

Q ss_pred             CHHHHHHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         11 LRDEIVESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        11 s~~~~~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      +..++...+..+.++..|.    .++.++..|...||+.+|.+||++. ++...+..
T Consensus       221 ~~~~~~~~i~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~Rps~~-ei~~~L~~  272 (287)
T d1opja_         221 DLSQVYELLEKDYRMERPE----GCPEKVYELMRACWQWNPSDRPSFA-EIHQAFET  272 (287)
T ss_dssp             CHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             hHHHHHHHHhcCCCCCCCc----cchHHHHHHHHHHcCCCHhHCcCHH-HHHHHHHH
Confidence            3444555566666666665    7788999999999999999999986 77776654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.80  E-value=0.0083  Score=36.19  Aligned_cols=53  Identities=25%  Similarity=0.740  Sum_probs=37.7

Q ss_pred             CCHHHHHHHH-hcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         10 ILRDEIVESV-RKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        10 ls~~~~~~~~-~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      .+..++...+ ..+.++..|.    .++.++..+...||..+|.+||++. ++.+.+.+
T Consensus       218 ~~~~~~~~~i~~~~~~~~~~~----~~~~~l~~li~~cl~~dp~~RPt~~-ei~~~L~~  271 (273)
T d1u46a_         218 LNGSQILHKIDKEGERLPRPE----DCPQDIYNVMVQCWAHKPEDRPTFV-ALRDFLLE  271 (273)
T ss_dssp             CCHHHHHHHHHTSCCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             cCHHHHHHHHHhCCCCCCCcc----cccHHHHHHHHHHcCCChhHCcCHH-HHHHHHHh
Confidence            3444444444 3344555555    6778999999999999999999996 77776653

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.31  E-value=0.014  Score=35.99  Aligned_cols=46  Identities=28%  Similarity=0.548  Sum_probs=36.0

Q ss_pred             HHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         16 VESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        16 ~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ...+..+.++..|.    .++.++..|...||..+|.+||++. ++++.+.
T Consensus       277 ~~~~~~~~~~~~p~----~~~~~l~~li~~cl~~dP~~RPt~~-ei~~~L~  322 (325)
T d1rjba_         277 YKLIQNGFKMDQPF----YATEEIYIIMQSCWAFDSRKRPSFP-NLTSFLG  322 (325)
T ss_dssp             HHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             HHHHhcCCCCCCCC----cCCHHHHHHHHHHcCCChhHCcCHH-HHHHHHh
Confidence            34445566665565    7788999999999999999999996 8887764

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.013  Score=35.55  Aligned_cols=45  Identities=31%  Similarity=0.724  Sum_probs=33.7

Q ss_pred             HHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         17 ESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        17 ~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..+..|.++..|.    .++.++..+...||+.+|.+||++. +++..+.
T Consensus       248 ~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~Rpt~~-eil~~L~  292 (299)
T d1ywna1         248 RRLKEGTRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTFS-ELVEHLG  292 (299)
T ss_dssp             HHHHHTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             HHHhcCCCCCCCc----cCCHHHHHHHHHHcCCChhHCcCHH-HHHHHHH
Confidence            3444555554454    6778999999999999999999986 7776654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.10  E-value=0.016  Score=35.54  Aligned_cols=46  Identities=35%  Similarity=0.778  Sum_probs=34.8

Q ss_pred             HHHHhcCCCCCCCCcCcccCHHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         16 VESVRKGEKCLRPNLSELTCEEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        16 ~~~~~~g~~~~~p~~~~~~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ...+..+.++..|.    ..+.++..|...||..+|.+||++. +++..+.
T Consensus       258 ~~~i~~~~~~~~~~----~~~~~l~~Li~~cl~~dP~~RPs~~-~il~~L~  303 (311)
T d1t46a_         258 YKMIKEGFRMLSPE----HAPAEMYDIMKTCWDADPLKRPTFK-QIVQLIE  303 (311)
T ss_dssp             HHHHHHTCCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHH
T ss_pred             HHHHhcCCCCCCcc----cccHHHHHHHHHHcCCChhHCcCHH-HHHHHHH
Confidence            34455566555555    6778899999999999999999986 7766554

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.09  E-value=0.085  Score=31.64  Aligned_cols=33  Identities=27%  Similarity=0.646  Sum_probs=27.8

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHHHHHhc
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIVESVRK   67 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~~   67 (116)
                      +++.+++.+...||..+|.+||++. +++..++.
T Consensus       237 ~~~~~l~~li~~cl~~dp~~RPt~~-~il~~Le~  269 (276)
T d1uwha_         237 NCPKAMKRLMAECLKKKRDERPLFP-QILASIEL  269 (276)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHH-HHHHHHHH
T ss_pred             cchHHHHHHHHHHcCCCHhHCcCHH-HHHHHHHH
Confidence            5678999999999999999999986 77766543

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.63  E-value=0.4  Score=28.42  Aligned_cols=28  Identities=29%  Similarity=0.469  Sum_probs=22.6

Q ss_pred             cCHHHHHHHHHHhcccCCCCCCCChHHHH
Q psy12612         34 TCEEEVTAIMKRCWNEDPSERPDFTTEIV   62 (116)
Q Consensus        34 ~~~~dv~s~g~~~we~~~~~~p~~~~~~~   62 (116)
                      ..+.++..|...||+.+|.+||++. +++
T Consensus       237 ~~s~~l~~li~~~L~~dp~~Rps~~-ell  264 (269)
T d2java1         237 RYSDELNEIITRMLNLKDYHRPSVE-EIL  264 (269)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHH-HHH
T ss_pred             ccCHHHHHHHHHHcCCChhHCcCHH-HHH
Confidence            5567888999999999999999875 554

>d1uj8a1 a.159.5.1 (A:13-76) Iron-sulfur cluster assembly protein IscX {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Another 3-helical bundle
superfamily: IscX-like
family: IscX-like
domain: Iron-sulfur cluster assembly protein IscX
species: Escherichia coli [TaxId: 562]

Probab=85.58  E-value=0.59  Score=21.52  Aligned_cols=52  Identities=17%  Similarity=0.298  Sum_probs=36.1

Q ss_pred             HHHHHHHHhcccCCCCCC---CChHHHHHHHhcCCC-CCCCCCCccchHHHHHHHHHHhcc
Q psy12612         38 EVTAIMKRCWNEDPSERP---DFTTEIVESVRKGEK-CLRPSLSELTCEEEVTAIMKRCWN   94 (116)
Q Consensus        38 dv~s~g~~~we~~~~~~p---~~~~~~~~~l~~~~~-~~~p~~~~~~~~~~l~~l~~~Cw~   94 (116)
                      |+..+++.+.+..|..-|   .|. ++...+..-.. -..|.    .|++.+.+-|+.+|-
T Consensus         6 D~~dIA~~L~e~~pdvDP~~irFt-DL~~wV~~L~~F~Ddp~----~~nEkiLEAIQmaWi   61 (64)
T d1uj8a1           6 DSREIGEALYDAYPDLDPKTVRFT-DMHQWICDLEDFDDDPQ----ASNEKILEAILLVWL   61 (64)
T ss_dssp             CHHHHHHHHHHHSTTSCGGGCCHH-HHHHHHHTSTTBCSCGG----GCCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHCCCCCCCEeehH-HHHHHHhcCCCCCCCcc----cccHHHHHHHHHHHh
Confidence            667788888888887766   343 66666654322 23343    799999999999994

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.27  E-value=0.38  Score=29.02  Aligned_cols=30  Identities=20%  Similarity=0.453  Sum_probs=24.3

Q ss_pred             HHHHHHHHHHhcccCCCCCCCChHHHHHHHh
Q psy12612         36 EEEVTAIMKRCWNEDPSERPDFTTEIVESVR   66 (116)
Q Consensus        36 ~~dv~s~g~~~we~~~~~~p~~~~~~~~~l~   66 (116)
                      ..++..++..||..+|.+||++. ++...+.
T Consensus       264 ~~~l~~li~~cl~~dp~~Rps~~-ei~~~L~  293 (303)
T d1vjya_         264 LRVMAKIMRECWYANGAARLTAL-RIKKTLS  293 (303)
T ss_dssp             HHHHHHHHHTTCCSSGGGSCCHH-HHHHHHH
T ss_pred             HHHHHHHHHHHcccCHhHCcCHH-HHHHHHH
Confidence            34688999999999999999986 7766554