BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12613
(76 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9JJL3|SO1B2_MOUSE Solute carrier organic anion transporter family member 1B2 OS=Mus
musculus GN=Slco1b2 PE=1 SV=1
Length = 689
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 2 ATQGACPAD-CGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALG 60
A G CP D C + + ++I +++FF+A G +I R V PE KSL +G +
Sbjct: 516 ARLGECPRDKCKTKYYFYITFQVIISFFTALGSTSLMLILIRSVQPELKSLGMGFHSLVV 575
Query: 61 CGLAFIPGPIIYGALL 76
L I P+ YGAL+
Sbjct: 576 RTLGGILAPVYYGALI 591
>sp|Q9Y6L6|SO1B1_HUMAN Solute carrier organic anion transporter family member 1B1 OS=Homo
sapiens GN=SLCO1B1 PE=1 SV=2
Length = 691
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 2 ATQGACPAD--CGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEAL 59
A G CP D C F +F+ I L FFSA G + ++ + V PE KSL++G +
Sbjct: 519 AHLGECPRDDACTRKFYFFVAIQVLNLFFSALGGTSHVMLIVKIVQPELKSLALGFHSMV 578
Query: 60 GCGLAFIPGPIIYGALL 76
L I PI +GAL+
Sbjct: 579 IRALGGILAPIYFGALI 595
>sp|Q9QZX8|SO1B2_RAT Solute carrier organic anion transporter family member 1B2
OS=Rattus norvegicus GN=Slco1b2 PE=1 SV=2
Length = 687
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 2 ATQGACPA-DCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALG 60
A G CP C +++ ++I + ++FF+A G +I + V PE KSL++G +
Sbjct: 514 AHLGECPRYKCKTNYYFYIILQVTVSFFTAMGSPSLILILMKSVQPELKSLAMGFHSLII 573
Query: 61 CGLAFIPGPIIYGALL 76
L I PI YGA +
Sbjct: 574 RALGGILAPIYYGAFI 589
>sp|Q92959|SO2A1_HUMAN Solute carrier organic anion transporter family member 2A1 OS=Homo
sapiens GN=SLCO2A1 PE=1 SV=2
Length = 643
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 2 ATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGC 61
A G+CP C + IF++ ++ + ++ R V+ E+KS +IG+ L
Sbjct: 502 AKTGSCPVPCAHFLLPAIFLISFVSLIACISHNPLYMMVLRVVNQEEKSFAIGVQFLLMR 561
Query: 62 GLAFIPGPIIYG 73
LA++P P +YG
Sbjct: 562 LLAWLPSPALYG 573
>sp|Q9H2Y9|SO5A1_HUMAN Solute carrier organic anion transporter family member 5A1 OS=Homo
sapiens GN=SLCO5A1 PE=2 SV=2
Length = 848
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 2 ATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGC 61
A G C C + + +F+ ++ F +A + I+ R V E++ ++G+ L
Sbjct: 636 AVSGKCKRTCNTLIPFLVFLF-IVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLR 694
Query: 62 GLAFIPGPIIYGALL 76
LA+IP PI +GA++
Sbjct: 695 TLAYIPTPIYFGAVI 709
>sp|Q9NPD5|SO1B3_HUMAN Solute carrier organic anion transporter family member 1B3 OS=Homo
sapiens GN=SLCO1B3 PE=1 SV=1
Length = 702
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 2 ATQGACPAD--CGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEAL 59
A G CP D C F ++ I + + FSATG ++ + V PE K+L++G +
Sbjct: 519 AHLGECPRDNTCTRKFFIYVAIQVINSLFSATGGTTFILLTVKIVQPELKALAMGFQSMV 578
Query: 60 GCGLAFIPGPIIYGALL 76
L I PI +GAL+
Sbjct: 579 IRTLGGILAPIYFGALI 595
>sp|Q9EPT5|SO2A1_MOUSE Solute carrier organic anion transporter family member 2A1 OS=Mus
musculus GN=Slco2a1 PE=1 SV=2
Length = 643
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 2 ATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGC 61
A G+CP C + IF++ + + ++ R V+ ++KS +IG+ L
Sbjct: 501 AKTGSCPTSCAQLLLPSIFLISFVALIACVSHNPLYMMVLRVVNQDEKSFAIGVQFLLMR 560
Query: 62 GLAFIPGPIIYGALL 76
LA++P P +YG L+
Sbjct: 561 LLAWLPSPSLYGLLI 575
>sp|Q99J94|SO1A6_MOUSE Solute carrier organic anion transporter family member 1A6 OS=Mus
musculus GN=Slco1a6 PE=2 SV=1
Length = 670
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 2 ATQGACPA--DCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEAL 59
A G C DC + +F+ I FF + ++ RC+ E+KSL IG+
Sbjct: 495 AVLGLCKKGPDCANKLQYFLIITVFCCFFYSLATIPGYMVFLRCMKSEEKSLGIGLQAFF 554
Query: 60 GCGLAFIPGPIIYGALL 76
A IP PI +GAL+
Sbjct: 555 MRLFAGIPAPIYFGALI 571
>sp|Q9GMU6|SO1C1_MACFA Solute carrier organic anion transporter family member 1C1
OS=Macaca fascicularis GN=SLCO1C1 PE=2 SV=1
Length = 602
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 5 GACPAD--CGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 62
G C D C F++F+ I + ++ + G I+ RC+ P+ KS ++GI
Sbjct: 429 GRCQKDNGCPQMFLYFLVISVITSYTLSLGGIPGYILLLRCIKPQLKSFALGIYTLSIRV 488
Query: 63 LAFIPGPIIYGALL 76
LA IP P+ +G L+
Sbjct: 489 LAGIPAPVYFGVLI 502
>sp|Q9UIG8|SO3A1_HUMAN Solute carrier organic anion transporter family member 3A1 OS=Homo
sapiens GN=SLCO3A1 PE=1 SV=3
Length = 710
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 5 GACPAD-CGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGL 63
G CP+ C F+ F+ ++C+ + A + + II R VSPE KS ++G+ L L
Sbjct: 525 GKCPSPGCQEAFLTFLCVMCICSLIGAMAQTPSVIILIRTVSPELKSYALGVLFLLLRLL 584
Query: 64 AFIPGPIIYGA 74
FIP P+I+GA
Sbjct: 585 GFIPPPLIFGA 595
>sp|Q9ERB5|SO1C1_MOUSE Solute carrier organic anion transporter family member 1C1 OS=Mus
musculus GN=Slco1c1 PE=1 SV=1
Length = 715
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 5 GACPAD--CGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 62
G C D C F++F+ I + ++ + G I+ RC+ P+ KS ++GI
Sbjct: 542 GRCQKDNGCSQMFLYFLVISVITSYTLSLGGIPGYILLLRCIQPQLKSFALGIYTLAVRV 601
Query: 63 LAFIPGPIIYGALL 76
LA IP P+ +G L+
Sbjct: 602 LAGIPAPVYFGVLI 615
>sp|Q9EPZ7|SO1C1_RAT Solute carrier organic anion transporter family member 1C1
OS=Rattus norvegicus GN=Slco1c1 PE=1 SV=1
Length = 716
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 5 GACPAD--CGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 62
G C D C F++F+ I + ++ + G I+ RC+ P+ KS ++GI
Sbjct: 543 GRCQKDNGCSQMFLYFLVISVITSYTLSLGGIPGYILLLRCIQPQLKSFALGIYTLAVRV 602
Query: 63 LAFIPGPIIYGALL 76
LA IP P+ +G L+
Sbjct: 603 LAGIPAPVYFGVLI 616
>sp|Q99N02|SO3A1_RAT Solute carrier organic anion transporter family member 3A1
OS=Rattus norvegicus GN=Slco3a1 PE=2 SV=1
Length = 710
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 5 GACPAD-CGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGL 63
G CP+ C F+ F+ ++C+ + A + + II R VSPE KS ++G+ L L
Sbjct: 525 GKCPSPGCQEAFLTFLCVMCVCSLIGAMAQTPSVIILIRTVSPELKSYALGVLFLLLRLL 584
Query: 64 AFIPGPIIYGA 74
FIP P+I+GA
Sbjct: 585 GFIPPPLIFGA 595
>sp|Q8R3L5|SO3A1_MOUSE Solute carrier organic anion transporter family member 3A1 OS=Mus
musculus GN=Slco3a1 PE=2 SV=1
Length = 710
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 5 GACPAD-CGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGL 63
G CP+ C F+ F+ ++C+ + A + + II R VSPE KS ++G+ L L
Sbjct: 525 GKCPSPGCQEAFLTFLCVMCVCSLIGAMAQTPSVIILIRTVSPELKSYALGVLFLLLRLL 584
Query: 64 AFIPGPIIYGA 74
FIP P+I+GA
Sbjct: 585 GFIPPPLIFGA 595
>sp|Q8HYW2|SO3A1_BOVIN Solute carrier organic anion transporter family member 3A1 OS=Bos
taurus GN=SLCO3A1 PE=2 SV=1
Length = 710
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 5 GACPAD-CGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGL 63
G CP+ C F+ F+ ++C+ + A + + II R VSPE KS ++G+ L L
Sbjct: 525 GKCPSPGCQEAFLTFLCVMCVCSMIGAMAQTPSVIILIRTVSPELKSYALGVLFLLLRLL 584
Query: 64 AFIPGPIIYGA 74
FIP P+I+GA
Sbjct: 585 GFIPPPLIFGA 595
>sp|O88397|SO1A5_RAT Solute carrier organic anion transporter family member 1A5
OS=Rattus norvegicus GN=Slco1a5 PE=2 SV=2
Length = 670
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 2 ATQGACPA--DCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEAL 59
A G C +C + +F+ + + +F + ++ RC+ PE+KSL IG+
Sbjct: 495 AVLGLCKKGPECANKLQYFLIMSVIGSFIYSITAIPGYMVLLRCIKPEEKSLGIGLHAFC 554
Query: 60 GCGLAFIPGPIIYGALL 76
A IP PI +GAL+
Sbjct: 555 TRVFAGIPAPIYFGALI 571
>sp|Q9NYB5|SO1C1_HUMAN Solute carrier organic anion transporter family member 1C1 OS=Homo
sapiens GN=SLCO1C1 PE=2 SV=1
Length = 712
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 5 GACPAD--CGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 62
G C D C F++F+ I + ++ + G I+ RC+ P+ KS ++GI
Sbjct: 539 GRCQKDNGCPQMFLYFLVISVITSYTLSLGGIPGYILLLRCIKPQLKSFALGIYTLAIRV 598
Query: 63 LAFIPGPIIYGALL 76
LA IP P+ +G L+
Sbjct: 599 LAGIPAPVYFGVLI 612
>sp|Q00910|SO2A1_RAT Solute carrier organic anion transporter family member 2A1
OS=Rattus norvegicus GN=Slco2a1 PE=1 SV=3
Length = 644
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 2 ATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGC 61
A G+CP C + IF++ + ++ R V+ ++KS +IG+ L
Sbjct: 502 AKTGSCPTSCAQLLLPSIFLISFAALIACISHNPLYMMVLRVVNQDEKSFAIGVQFLLMR 561
Query: 62 GLAFIPGPIIYGALL 76
LA++P P +YG L+
Sbjct: 562 LLAWLPAPSLYGLLI 576
>sp|Q9JHI3|SO2B1_RAT Solute carrier organic anion transporter family member 2B1
OS=Rattus norvegicus GN=Slco2b1 PE=1 SV=1
Length = 682
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%)
Query: 3 TQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 62
+ G+C + C + FI ++ L ++ + ++ R V EDK+L++G+ L
Sbjct: 537 SAGSCESACSRLVLPFILLISLGAAVASITHTPSFMLILRGVKKEDKTLAVGMQFMLLRV 596
Query: 63 LAFIPGPIIYGA 74
LA++P P+I+G+
Sbjct: 597 LAWMPSPVIHGS 608
>sp|P46720|SO1A1_RAT Solute carrier organic anion transporter family member 1A1
OS=Rattus norvegicus GN=Slco1a1 PE=1 SV=1
Length = 670
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 2 ATQGACPA--DCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEAL 59
A G C +C + +F+ + +++F + ++ RCV E+KSL +G+
Sbjct: 495 AVLGLCKKGPECANRLQYFLILTIIISFIYSLTAIPGYMVFLRCVKSEEKSLGVGLHTFC 554
Query: 60 GCGLAFIPGPIIYGALL 76
A IP P+ +GAL+
Sbjct: 555 IRVFAGIPAPVYFGALI 571
>sp|Q8K078|SO4A1_MOUSE Solute carrier organic anion transporter family member 4A1 OS=Mus
musculus GN=Slco4a1 PE=1 SV=2
Length = 723
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 2 ATQGACPADCGSH--FMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEAL 59
AT G C + C S + +F++ + F S+ T+ RCVS +S ++GI +
Sbjct: 567 ATAGKCASTCQSKPFLLVLVFVVIIFTFLSSIPALTATL---RCVSDRQRSFALGIQWIV 623
Query: 60 GCGLAFIPGPIIYG 73
L IPGPI +G
Sbjct: 624 VRTLGSIPGPIAFG 637
>sp|G3V0H7|SO1B7_HUMAN Putative solute carrier organic anion transporter family member 1B7
OS=Homo sapiens GN=SLCO1B7 PE=5 SV=1
Length = 640
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 2 ATQGACPAD--CGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEAL 59
A G CP D C + I L F A G +++ R V PE K+L+IG +
Sbjct: 472 AHLGECPRDDACTRKSYVYFVIQVLDAFLCAVGLTSYSVLVIRIVQPELKALAIGFHSMI 531
Query: 60 GCGLAFIPGPIIYGALL 76
L I PI +GAL+
Sbjct: 532 MRSLGGILVPIYFGALI 548
>sp|Q8BXB6|SO2B1_MOUSE Solute carrier organic anion transporter family member 2B1 OS=Mus
musculus GN=Slco2b1 PE=1 SV=1
Length = 683
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 5 GACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLA 64
G+C + C + FI + L ++ + ++ R V EDK+L++G+ L LA
Sbjct: 540 GSCESACSRLVLPFIVLFSLGAGLASITHTPSFMLILRGVKKEDKTLAVGMQFMLLRVLA 599
Query: 65 FIPGPIIYGA 74
++P P+I+G+
Sbjct: 600 WMPSPVIHGS 609
>sp|P46721|SO1A2_HUMAN Solute carrier organic anion transporter family member 1A2 OS=Homo
sapiens GN=SLCO1A2 PE=2 SV=1
Length = 670
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 2 ATQGACPA--DCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEAL 59
A G C DC +F+ + + +F + ++ RC+ E+KSL +G+
Sbjct: 495 AVLGLCDKGPDCSLMLQYFLILSAMSSFIYSLAAIPGYMVLLRCMKSEEKSLGVGLHTFC 554
Query: 60 GCGLAFIPGPIIYGALL 76
A IP PI +GAL+
Sbjct: 555 TRVFAGIPAPIYFGALM 571
>sp|O35913|SO1A4_RAT Solute carrier organic anion transporter family member 1A4
OS=Rattus norvegicus GN=Slco1a4 PE=2 SV=1
Length = 661
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 10 DCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGP 69
DC + +F+ I F + ++ RC+ E+KSL +G+ LA IP P
Sbjct: 504 DCANKLQYFLIIAIFGCFIYSLAGIPGYMVLLRCIKSEEKSLGVGLHAFCIRILAGIPAP 563
Query: 70 IIYGALL 76
I +GAL+
Sbjct: 564 IYFGALI 570
>sp|Q91YY5|SO1A5_MOUSE Solute carrier organic anion transporter family member 1A5 OS=Mus
musculus GN=Slco1a5 PE=2 SV=1
Length = 670
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 2 ATQGACPA--DCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEAL 59
A G C +C + +F+ + + +F + ++ RC+ E+KSL IG+
Sbjct: 495 AVLGLCKKGPECANKLQYFLIMSVIGSFIYSITAIPGYMVLLRCIKSEEKSLGIGLHAFC 554
Query: 60 GCGLAFIPGPIIYGALL 76
A IP PI +GAL+
Sbjct: 555 TRIFAGIPAPIYFGALI 571
>sp|Q8BGD4|SO4C1_MOUSE Solute carrier organic anion transporter family member 4C1 OS=Mus
musculus GN=Slco4c1 PE=2 SV=1
Length = 722
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 2 ATQGACPADCGSH--FMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEAL 59
A G C C + F+ FI + F + T T+ RCV+ +SL++G+ L
Sbjct: 563 AKAGKCRTRCSNLPIFLGIFFITVIFTFMAGTPI---TVSILRCVNHRHRSLALGVQFML 619
Query: 60 GCGLAFIPGPIIYGALL 76
L IPGPII+G ++
Sbjct: 620 LRLLGTIPGPIIFGVII 636
>sp|Q71MB6|SO4C1_RAT Solute carrier organic anion transporter family member 4C1
OS=Rattus norvegicus GN=Slco4c1 PE=1 SV=1
Length = 724
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 2 ATQGACPADCGSH--FMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEAL 59
A G C C + F+ FI + F + T T+ RCV+ +SL++G+ L
Sbjct: 565 ARAGKCKTQCSNLPIFLGIFFITVIFTFMAGTPI---TVSILRCVNHRQRSLALGVQFML 621
Query: 60 GCGLAFIPGPIIYGALL 76
L IPGPII+G +
Sbjct: 622 LRLLGTIPGPIIFGVTI 638
>sp|O94956|SO2B1_HUMAN Solute carrier organic anion transporter family member 2B1 OS=Homo
sapiens GN=SLCO2B1 PE=1 SV=2
Length = 709
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 38/70 (54%)
Query: 5 GACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLA 64
G+C + C + F+ ++ L + + + ++ R V EDK+L++GI LA
Sbjct: 551 GSCDSTCSHLVVPFLLLVSLGSALACLTHTPSFMLILRGVKKEDKTLAVGIQFMFLRILA 610
Query: 65 FIPGPIIYGA 74
++P P+I+G+
Sbjct: 611 WMPSPVIHGS 620
>sp|Q9EP96|SO1A4_MOUSE Solute carrier organic anion transporter family member 1A4 OS=Mus
musculus GN=Slco1a4 PE=2 SV=1
Length = 670
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 10 DCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGP 69
+C + +F+ I + F + G ++ RC+ E+KSL +G+ L IP P
Sbjct: 505 ECANKLQYFLIISIIGCFIFSLGAIPGYMVLLRCMKSEEKSLGVGLHTFCMRILGGIPAP 564
Query: 70 IIYGALL 76
I +GAL+
Sbjct: 565 IYFGALI 571
>sp|Q9QYE2|SO1A6_RAT Solute carrier organic anion transporter family member 1A6
OS=Rattus norvegicus GN=Slco1a6 PE=2 SV=1
Length = 670
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 10 DCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGP 69
DC + +F+ I +FF + +I RC+ E+KSL IG+ L I P
Sbjct: 505 DCANKLQYFLIITVFCSFFYSLSLIPGYMIFLRCMKSEEKSLGIGLQAFCMRILGGILAP 564
Query: 70 IIYGALL 76
I +G L+
Sbjct: 565 IYFGVLI 571
>sp|Q9QXZ6|SO1A1_MOUSE Solute carrier organic anion transporter family member 1A1 OS=Mus
musculus GN=Slco1a1 PE=2 SV=1
Length = 670
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 2 ATQGACPA--DCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEAL 59
A G C +C + +F+ +F + ++ RCV E+KS+ +G+
Sbjct: 495 AVLGLCKKGPECDNKLQYFLIKSVFSSFIFSLAAIPGYMVLLRCVKSEEKSIGVGLHAFF 554
Query: 60 GCGLAFIPGPIIYGALL 76
LA IP P+ +GAL+
Sbjct: 555 IRLLAGIPAPVYFGALI 571
>sp|Q54IV3|DDX42_DICDI Probable ATP-dependent RNA helicase ddx42 OS=Dictyostelium
discoideum GN=ddx42 PE=3 SV=1
Length = 986
Score = 33.9 bits (76), Expect = 0.30, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 31 TGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPII 71
TGRAGNT + + ++P+D S+ + + L F+P +I
Sbjct: 641 TGRAGNTGVAYTLITPKDIHFSVDLIKNLESASQFVPPELI 681
>sp|P70502|SO1A3_RAT Solute carrier organic anion transporter family member 1A3
OS=Rattus norvegicus GN=Slco1a3 PE=2 SV=2
Length = 670
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 10 DCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGP 69
+C + + + + L+ + ++ RC+ E+KSL IGI A IP P
Sbjct: 505 ECTNKLQYLLILSGFLSILYSFAAIPGYMVFLRCIKSEEKSLGIGIHAFCIRVFAGIPAP 564
Query: 70 IIYGALL 76
I +GAL+
Sbjct: 565 IYFGALI 571
>sp|P0CQ98|PRP5_CRYNJ Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=PRP5 PE=3 SV=1
Length = 1072
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 31 TGRAGN--TIIQFRCVSPEDKSLSIGITEALGCGLAFIP 67
TGRAGN T I F ++PE + S+ I AL AFIP
Sbjct: 747 TGRAGNKGTCITF--ITPEQERFSVDIVRALEASKAFIP 783
>sp|P0CQ99|PRP5_CRYNB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=PRP5 PE=3 SV=1
Length = 1072
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 31 TGRAGN--TIIQFRCVSPEDKSLSIGITEALGCGLAFIP 67
TGRAGN T I F ++PE + S+ I AL AFIP
Sbjct: 747 TGRAGNKGTCITF--ITPEQERFSVDIVRALEASKAFIP 783
>sp|B4JW98|CALYP_DROGR Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
grimshawi GN=calypso PE=3 SV=1
Length = 462
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 4 QGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 62
Q P C +H + + + C N G + +SPE+K L+IG T L C
Sbjct: 108 QQVVPNSCATHALLSVLLNCNENNLQLGETLGRLKAHTKGMSPENKGLAIGNTPELACA 166
>sp|Q291J4|CALYP_DROPS Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
pseudoobscura pseudoobscura GN=calypso PE=3 SV=1
Length = 475
Score = 32.3 bits (72), Expect = 0.91, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 4 QGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 62
Q P C +H + + + C N + + +SPE+K L+IG T L C
Sbjct: 123 QQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKVHTKGMSPENKGLAIGNTPELACA 181
>sp|B4GAM2|CALYP_DROPE Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
persimilis GN=calypso PE=3 SV=1
Length = 475
Score = 32.3 bits (72), Expect = 0.91, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 4 QGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 62
Q P C +H + + + C N + + +SPE+K L+IG T L C
Sbjct: 123 QQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKVHTKGMSPENKGLAIGNTPELACA 181
>sp|B3NPV7|CALYP_DROER Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila erecta
GN=calypso PE=3 SV=1
Length = 471
Score = 32.3 bits (72), Expect = 0.91, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 4 QGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 62
Q P C +H + + + C N + + +SPE+K L+IG T L C
Sbjct: 124 QQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKVHTKGMSPENKGLAIGNTPELACA 182
>sp|Q6ZQN7|SO4C1_HUMAN Solute carrier organic anion transporter family member 4C1 OS=Homo
sapiens GN=SLCO4C1 PE=1 SV=1
Length = 724
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 37 TIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYG 73
T+ RCV+ +SL++GI + L IPGPII+G
Sbjct: 599 TVSILRCVNHRQRSLALGIQFMVLRLLGTIPGPIIFG 635
>sp|Q5RFF0|SO4C1_PONAB Solute carrier organic anion transporter family member 4C1 OS=Pongo
abelii GN=SLCO4C1 PE=2 SV=1
Length = 724
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 37 TIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYG 73
T+ RCV+ +SL++GI + L IPGPII+G
Sbjct: 599 TVSILRCVNHRQRSLALGIQFMVLRLLGTIPGPIIFG 635
>sp|B4P6P6|CALYP_DROYA Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila yakuba
GN=calypso PE=3 SV=1
Length = 471
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 4 QGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRC----VSPEDKSLSIGITEAL 59
Q P C +H + + + C N + G+T+ + + +SPE+K L+IG T L
Sbjct: 124 QQVVPNSCATHALLSVLLNCNENNL----QLGDTLSRLKAHTKGMSPENKGLAIGNTPEL 179
Query: 60 GCG 62
C
Sbjct: 180 ACA 182
>sp|B3MIV9|CALYP_DROAN Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
ananassae GN=calypso PE=3 SV=1
Length = 470
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 4 QGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRC----VSPEDKSLSIGITEAL 59
Q P C +H + + + C N + G+T+ + + +SPE+K L+IG T L
Sbjct: 122 QQVVPNSCATHALLSVLLNCNENNL----QLGDTLSRLKAHTKGMSPENKGLAIGNTPEL 177
Query: 60 GCG 62
C
Sbjct: 178 ACA 180
>sp|B4QHH0|CALYP_DROSI Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
simulans GN=calypso PE=3 SV=1
Length = 471
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 4 QGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 62
Q P C +H + + + C N + +SPE+K L+IG T L C
Sbjct: 124 QQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELACA 182
>sp|B4HST0|CALYP_DROSE Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
sechellia GN=calypso PE=3 SV=1
Length = 471
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 4 QGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 62
Q P C +H + + + C N + +SPE+K L+IG T L C
Sbjct: 124 QQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELACA 182
>sp|Q7K5N4|CALYP_DROME Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
melanogaster GN=calypso PE=1 SV=1
Length = 471
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 4 QGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 62
Q P C +H + + + C N + +SPE+K L+IG T L C
Sbjct: 124 QQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELACA 182
>sp|Q4IP34|PRP5_GIBZE Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Gibberella
zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL
31084) GN=PRP5 PE=3 SV=2
Length = 1207
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 31 TGRAGNTIIQFRCVSPEDKSLSIGITEAL 59
TGRAGNT + V+PE ++ + GI +AL
Sbjct: 918 TGRAGNTGVAVTFVTPEQENCAPGIAKAL 946
>sp|B4LQ24|CALYP_DROVI Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila virilis
GN=calypso PE=3 SV=1
Length = 462
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 4 QGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 62
Q P C +H + + + C N + +SPE+K L+IG T L C
Sbjct: 108 QQVVPNSCATHALLSVLLNCNENNLQLGETLSRLKAHTKGMSPENKGLAIGNTPELACA 166
>sp|B4KT51|CALYP_DROMO Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
mojavensis GN=calypso PE=3 SV=1
Length = 461
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 4 QGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 62
Q P C +H + + + C N + +SPE+K L+IG T L C
Sbjct: 108 QQVVPNSCATHALLSVLLNCNENNLQLGETLSRLKAHTKGMSPENKGLAIGNTPELACA 166
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.146 0.488
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,956,396
Number of Sequences: 539616
Number of extensions: 887726
Number of successful extensions: 2806
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2758
Number of HSP's gapped (non-prelim): 52
length of query: 76
length of database: 191,569,459
effective HSP length: 47
effective length of query: 29
effective length of database: 166,207,507
effective search space: 4820017703
effective search space used: 4820017703
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)