RPS-BLAST 2.2.26 [Sep-21-2011]

Database: pdb70 
           27,921 sequences; 6,701,793 total letters

Searching..................................................done

Query= psy12613
         (76 letters)



>1xs0_A Inhibitor of vertebrate lysozyme; alpha beta fold, dimer,
          hydrolase inhibitor; 1.58A {Escherichia coli} SCOP:
          d.233.1.1 PDB: 1gpq_A
          Length = 136

 Score = 26.6 bits (58), Expect = 0.65
 Identities = 7/16 (43%), Positives = 10/16 (62%), Gaps = 1/16 (6%)

Query: 6  AC-PADCGSHFMWFIF 20
          AC P DCGS  +  ++
Sbjct: 56 ACKPHDCGSQRIAVMW 71


  Database: pdb70
    Posted date:  Sep 4, 2012  3:40 AM
  Number of letters in database: 6,701,793
  Number of sequences in database:  27,921
  
Lambda     K      H
   0.331    0.146    0.488 

Gapped
Lambda     K      H
   0.267   0.0528    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,139,885
Number of extensions: 52995
Number of successful extensions: 108
Number of sequences better than 10.0: 1
Number of HSP's gapped: 108
Number of HSP's successfully gapped: 1
Length of query: 76
Length of database: 6,701,793
Length adjustment: 45
Effective length of query: 31
Effective length of database: 5,445,348
Effective search space: 168805788
Effective search space used: 168805788
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 51 (23.9 bits)