BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12614
(708 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q969X6|CIR1A_HUMAN Cirhin OS=Homo sapiens GN=CIRH1A PE=1 SV=1
Length = 686
Score = 312 bits (800), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 219/700 (31%), Positives = 345/700 (49%), Gaps = 40/700 (5%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I C+A +S+RLAVSR D ++EI+++S ++ F G
Sbjct: 1 MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHE- 59
Query: 71 SNSIECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129
S + E L W RLFS GL G + EYD++ LNIK + G W ++ L G
Sbjct: 60 SRATEALCWAEGQRLFSAGLNGEIMEYDLQALNIKYAMDAFGGPIWSMAASPSGSQLLVG 119
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAI 189
E G + LFQI+ + + +E+ DRQ+ RIL +WH SG ++ G + V+D+ G A+
Sbjct: 120 CEDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHPSGTHIAAGSIDYISVFDVKSGSAV 179
Query: 190 HKMSLDKS--SKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTH---K 244
HKM +D+ + VW VAF +D TII+ DS G V+FWD TG VK+H
Sbjct: 180 HKMIVDRQYMGVSKRKCIVWGVAFLSDGTIISVDSAGKVQFWDSATGTL---VKSHLIAN 236
Query: 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304
D+ ++ V++ E+ + TV FQ V S S +Q WVR+ H D
Sbjct: 237 ADVQSIAVADQEDSFVVGTAEGTVFHFQLV---PVTSNSSEKQ----WVRTKPFQHHTHD 289
Query: 305 VKSLALHGNRLYSGGLDSYLSLSYYPPKTLVK-YPCTLAQST-----PVSLAKDIQHVLL 358
V+++A L SGG D++L K VK Y L + T +S +K Q +L
Sbjct: 290 VRTVAHSPTALISGGTDTHLVFRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLF 349
Query: 359 QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418
Q+ HLELW LGS +T N +PL ++ + I CS +S G ++
Sbjct: 350 QFAHHLELWRLGSTVATG----KNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGSWI 405
Query: 419 AYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYI 478
AYST S L+ L+ + D + R+ +PA L ++ +L S DST L S G L+I
Sbjct: 406 AYSTVSRFFLYRLNYEHDNISLKRVSKMPAFLRSAL--QILFSEDSTKLFVASNQGALHI 463
Query: 479 IDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKS--HVVIWKNGQHHASLP 536
+ LS K+ + + + L+ +S ++ + + HV K + H ++P
Sbjct: 464 VQLSGGSFKHLHAFQPQSGTVEAMCLLAVSPDGNWLAASGTSAGVHVYNVKQLKLHCTVP 523
Query: 537 RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQLPV 595
Y P TAMAI P + LV +SD ++ E+ + K +T +SR ++ + WL R P+
Sbjct: 524 AYNFPVTAMAIAPNTNNLVIAHSDQQVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDTPI 583
Query: 596 LGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSSNSTHVIESKV 655
I F P+ I L D C+I+K+ L + + P +N + VI +
Sbjct: 584 THISFHPKRPMHILLHDAYMFCIIDKSLPLPNDKTLLYNPFP------PTNESDVIRRRT 637
Query: 656 --AFHFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPP 693
AF + K L++ L+++ +++V+ + +LPP
Sbjct: 638 AHAFKISKIYKPLLFMDLLDERTLVAVERPLDDIIAQLPP 677
>sp|Q8R2N2|CIR1A_MOUSE Cirhin OS=Mus musculus GN=Cirh1a PE=2 SV=3
Length = 686
Score = 298 bits (764), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 214/700 (30%), Positives = 339/700 (48%), Gaps = 40/700 (5%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I C+A +S+RLAVSR D ++EI+++S ++ F G
Sbjct: 1 MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHE- 59
Query: 71 SNSIECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129
S E L W RLFS GL G + EYD++ LNIK + G W ++ L G
Sbjct: 60 SRGTEALCWAGGQRLFSAGLNGEILEYDLQALNIKYTLDAFGGPIWSMTASPSGSQLLVG 119
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAI 189
E G + LF+++ E + + + DRQ+ RIL WH +G ++ G + V+D+ G I
Sbjct: 120 CEDGSVKLFEVTPEKIQFARNFDRQKSRILSLCWHPAGTHVAAGSLDYISVFDVKSGSII 179
Query: 190 HKMSLDKS--SKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTH---K 244
KM LD+ VW VAF +D T+I+ DS G V+ WD TG + VK+H
Sbjct: 180 RKMVLDRQHLGVTKSRCIVWGVAFLSDGTVISVDSVGKVQLWDSATG---TLVKSHLVAN 236
Query: 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304
D+ ++ V++ E+ + TV FQ + S S +Q WVR+ H D
Sbjct: 237 ADVQSIAVADQEDSFVVGTAEGTVFHFQLV---SMTSNSSEKQ----WVRTKPFQHHTHD 289
Query: 305 VKSLALHGNRLYSGGLDSYLSLSYYPPKTLVK-YPCTLAQST-----PVSLAKDIQHVLL 358
V+++A L SGG D++L + + VK Y L + T +S +K Q +L
Sbjct: 290 VRAVAHSPTALISGGTDTHLVIRPLMERVEVKNYDAALRKITFPHRRLISCSKRRQLLLF 349
Query: 359 QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418
Q+ HLELW LGS +T N +PL ++ + I CS VS G ++
Sbjct: 350 QFAHHLELWRLGSTSATG----KNGDTLPLSKNADHLLHLKTKGPENIICSCVSPCGSWI 405
Query: 419 AYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYI 478
AYST S L+ L + D + R+ LP+ L ++ H+L S DST LL S G L+I
Sbjct: 406 AYSTASRFFLYRLKYERDNISLQRVSKLPSFLRSAL--HILFSEDSTKLLVASNQGSLHI 463
Query: 479 IDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKS--HVVIWKNGQHHASLP 536
+ LS K+ + + + L+ +S ++ + + HV + + H ++P
Sbjct: 464 VHLSEGSFKHLHTFQPQSGTVEAMCLLAVSPDGNWLAASGTSAGVHVYDLHHLKLHCTVP 523
Query: 537 RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQLPV 595
Y P TA+AI P + LV +SD ++ EF + K +T +SR L+ ++ WL R P+
Sbjct: 524 AYNFPVTALAIAPNTNNLVIAHSDQQVFEFSIPEKQYTEWSRSLQKQGFHQLWLQRDTPI 583
Query: 596 LGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDS--SNSTHVIES 653
I F P+ I L D C+I+K+ L + + P D +TH
Sbjct: 584 THISFHPKRPMHILLHDAYMFCIIDKSLPLPNEKTVLYNPLPPKNESDVFLRRTTH---- 639
Query: 654 KVAFHFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPP 693
F + K L++ L+++ +++V+ + +LPP
Sbjct: 640 --GFKMSKIYKPLLFMDLLDERTLVAVERPLDDIIAQLPP 677
>sp|Q06679|UTP4_YEAST U3 small nucleolar RNA-associated protein 4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP4 PE=1
SV=1
Length = 776
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 196/762 (25%), Positives = 331/762 (43%), Gaps = 116/762 (15%)
Query: 16 VHNIKFYAPEPKVINCIACEPKSS---------RLAVSRADQSIEIWDISETPHVDRVFI 66
VH +F P I +A KS+ RLA+ R++ +IEIW+ + V
Sbjct: 33 VHRCRFVDFTPATITSLAFSHKSNINKLTPSDLRLAIGRSNGNIEIWNPRNNWFQEMVIE 92
Query: 67 GDPLSNSIECLTWFND-----RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHK 121
G SIE L W N RLFS G V E+D+ + SG W +S++
Sbjct: 93 GGK-DRSIEGLCWSNVNGESLRLFSIGGSTVVTEWDLATGLPLRNYDCNSGVIWSISIND 151
Query: 122 KKRLLAAGTEQGHINLFQISD-EGLL-YEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAV 178
+ L+ G + G + L IS G+L ++ +L RQ+ R+L AW D+++ GC+ +
Sbjct: 152 SQDKLSVGCDNGTVVLIDISGGPGVLEHDTILMRQEARVLTLAWKKD-DFVIGGCSDGRI 210
Query: 179 RVWDIHK-----GHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGK 232
R+W K G +H M +DK+ K S T VW V + I +GDS G ++FWD +
Sbjct: 211 RIWSAQKNDENMGRLLHTMKVDKAKKES--TLVWSVIYLPRTDQIASGDSTGSIKFWDFQ 268
Query: 233 TGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCF-QRTRKPQVCSTSGPEQGSSV 291
K H D+L LT D NY++ AGVD + F Q T K Q ++
Sbjct: 269 FATLNQSFKAHDADVLCLTTDTDNNYVFSAGVDRKIFQFSQNTNKS---------QKNNR 319
Query: 292 WVRSVNRVIHEGDVKSLALHGNR----LYSGGLDSYL---SLSYYPPKTLVKYPCTLAQS 344
WV S NR++H D++++ + ++ L SGG++ L SL+ + K P S
Sbjct: 320 WVNSSNRLLHGNDIRAICAYQSKGADFLVSGGVEKTLVINSLTSFSNGNYRKMPTVEPYS 379
Query: 345 TPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNA 404
V + K+ + V+ S +++W++G TD S+ N +L+ K++ ++
Sbjct: 380 KNVLVNKEQRLVVSWSESTVKIWTMG----TDSSTEQNY---------KLVCKLTLKDDQ 426
Query: 405 TIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADS 464
I +S DG+ + S ++ L G+K +++++ N L T ++ D+
Sbjct: 427 NISTCSLSPDGQVLVVGRPSTTKVFHLQPVGNKLKVTKLDN---DLLLRTSTKLVKFIDN 483
Query: 465 TLLLAVSLNGPLYIIDLSSLEIK-------YCVDPYKSNLMSDVISLVQMSECKQYIVCA 517
+ ++ S ++I+DL S E + V KS++ I+ + E Q I
Sbjct: 484 SKIVICSCEDDVFIVDLESEEDEKPQEVELLEVTSTKSSIKVPYINRINHLEVDQNIAVI 543
Query: 518 DRKSHVVIWKNGQHHASLP--RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLN------ 569
R VV + + S P R TA+ I+ + ++V + +D++I EF++N
Sbjct: 544 SRGCGVVDILDLKARISKPLARLNNFITAVHINTSRKSVVVITADNKIYEFNMNLNSEAE 603
Query: 570 ----RKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVIN----- 620
T +S+ N P EW + + +GI D ++SS ++ + + I+
Sbjct: 604 NEDSESVLTQWSKNNTDNLPKEWKTLKENCVGIFSDIENSSRLWFWGATWISRIDFDVDF 663
Query: 621 ------KNKSLAHADAKI-----------------------PRLGPKVVSGDSSNSTHVI 651
K K H I L + G+ ST V
Sbjct: 664 PINKRRKQKKRTHEGLTITDESNFMNDEEDDEDDDIDMEISENLNVLLNQGNKIKSTDVQ 723
Query: 652 ---ESKVAFHFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEK 690
ES F F + K L++ ++ E+ ++ NPL+F K
Sbjct: 724 RNEESSGHFFFTDKYKPLLFVDLISSNELAIIERNPLTFHSK 765
>sp|O60161|UTP4_SCHPO U3 small nucleolar RNA-associated protein 4 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=utp4 PE=3 SV=1
Length = 710
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 172/730 (23%), Positives = 312/730 (42%), Gaps = 96/730 (13%)
Query: 16 VHNIKFYAPEPKVINCIACEPKSSR---------LAVSRADQSIEIWDISETPHVDRVFI 66
+H +F P I +A KS + LAV RA +IEIW+ + V
Sbjct: 3 IHRCRFIDYTPSAITAMAFSHKSGQNDSMPNNLLLAVGRASGNIEIWNPRNDWCLKTVLY 62
Query: 67 GDPLSNSIECLTWFND----RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK 122
G + SIE + W RLFS G + E+++ + +G W +++ +
Sbjct: 63 GG-VDRSIEGIVWSTGEEELRLFSIGFSTTITEWNLHTGKPLVNQDSNAGAIWSIAICDE 121
Query: 123 KRLLAAGTEQGHINLFQISD-EGLL-YEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVR 179
+ LA G + G LF IS G++ ++++L RQ RIL + + D+LV GCA ++
Sbjct: 122 TKTLAVGCDDGSCVLFDISGGPGVIEFKRVLMRQTSRILSLDFQTK-DHLVGGCADGVIK 180
Query: 180 VWDIHKGHA--IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQW 237
VWD+ ++ I +M +D++ K + +W V D TI++ DS G V+FW+GK
Sbjct: 181 VWDLSTPNSAIISRMQVDRARK-GEAALIWAVKSLRDGTIVSADSSGAVKFWNGKFFTLS 239
Query: 238 SDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297
K H D L L VS + + ++ +G+D + + R E G WV +
Sbjct: 240 QSFKLHLADALCLGVSANGDMVFSSGIDRKTIQYSR------------EGGKREWVSNSF 287
Query: 298 RVIHEGDVKSLALHGNR----LYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTP----VSL 349
R H DV+ +A+ + L SGG+D + L+ P + + + + P +++
Sbjct: 288 RRFHSHDVRCMAVFECKSLDVLISGGMD--MMLAVIPVRQFNRKNHRMISAVPQRPRMAV 345
Query: 350 AKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCS 409
A + +L + LW +GS R ++K+ + I +
Sbjct: 346 APKARLFMLWNDHEVLLWRIGSPGY------------------RFLLKIVLADEENISHA 387
Query: 410 VVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVL-ISADSTLLL 468
+S DG+ +A S+ +L+ L + ++ +++ +I +L + D L+
Sbjct: 388 AISPDGELIAISSVLRTKLYQLQYSDENVKVETVED---SFLSNIGASLLSFTVDKNKLI 444
Query: 469 AVSLNGPLYIIDLS-----SLEIKYCVDP--------YKSNL--MSDVISLVQMSECKQY 513
VS + +++I+LS LE+ P +SN+ M D I + +S Y
Sbjct: 445 LVSNDSEIFLIELSRLDSRQLEVFELSQPTSKKIAPRQRSNVSSMCDGICSIAVSSDGDY 504
Query: 514 IVCADRKSHVVIWK-NGQHHASLPRYRKPSTAMAIHPTL-STLVTVYSDHRIVEFDLNRK 571
AD ++ + + ++ LPR AMA P + L + +++ EFD+ +
Sbjct: 505 FAVADTVGNIFCYSLSNLTYSELPRVNTYVRAMAFRPDVRGRLAVATAGNQVYEFDVQSR 564
Query: 572 AFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAK 631
+ +S+ TN P E+ G FD + S ++ + + + N L A
Sbjct: 565 KLSEWSKNNSTNMPKEFSQLLDKAFGAFFDSKHPSRFWIWSANWVSFFDLNLQLPAPRAA 624
Query: 632 IPR-----------LGPKVVSGDSSN--STHVIESKVAFHFVRRNKHLVYFGSLNDKEML 678
R L K ++ +SN S + F + + ++ GS+ + E+L
Sbjct: 625 GKRKIEMNATVDGNLNDKKLANANSNGISNYGTGDSRCFWITHKYRPMLLVGSVGNSELL 684
Query: 679 SVQVNPLSFM 688
V+ P++ M
Sbjct: 685 VVE-RPIADM 693
>sp|O13282|TAF5_SCHPO Transcription initiation factor TFIID subunit 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf5 PE=1 SV=1
Length = 643
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 160 CTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD-FTI 217
C +H + Y++TG + R+WD+H+GH++ + V VA D T+
Sbjct: 468 CVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFN-------GHTQPVTAVAIAPDGHTM 520
Query: 218 ITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268
+ DS G + WD TG + ++ H+ +I +L+ S + L G D TV
Sbjct: 521 ASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTV 571
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 35/251 (13%)
Query: 29 INCIACEPKSSRLAVSRA-DQSIEIWDISE----------TPHVDRVFIGDPLSNSIECL 77
+NC+A P S R+ V+ D+ + +W + + T VD V NS E L
Sbjct: 19 VNCLALGPMSGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKF-----NSSEEL 73
Query: 78 TWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINL 137
+ +G G + YD+ I + + C+ H +A+G+ ++ L
Sbjct: 74 ------VVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKL 127
Query: 138 FQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDK 196
+ + +G +Y Q ++ + G +LVT +++WD+ G +
Sbjct: 128 WDVRRKGCIYTYKGHSDQVNMI--KFSPDGKWLVTASEDTTIKLWDLTMGKLFQE----- 180
Query: 197 SSKFSKNTA-VWCVAFCA-DFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE 254
F +T V + F +F + +G S V+FWD +T S + +++
Sbjct: 181 ---FKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDLETFQLVSSTSPGASAVRSISFHP 237
Query: 255 DENYLYCAGVD 265
D +YL+C+ D
Sbjct: 238 DGSYLFCSSQD 248
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 84 LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE 143
+ +GG VN + + + N S + + + + + L+ AG++ G + ++ +
Sbjct: 32 MVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFNSSEELVVAGSQSGTMKIYDLEPA 91
Query: 144 GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIH--KMSLDKSS-- 198
++ + L + I C +H G+++ +G V++WD+ + I+ K D+ +
Sbjct: 92 KIV--RTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVNMI 149
Query: 199 KFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENY 258
KFS + W V D TI + WD G + + K H + + +E +
Sbjct: 150 KFSPD-GKWLVTASEDTTI---------KLWDLTMGKLFQEFKNHTGGVTGIEFHPNE-F 198
Query: 259 LYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297
L +G V F Q+ S++ P G+S VRS++
Sbjct: 199 LLASGSSDRTVQFWDLETFQLVSSTSP--GASA-VRSIS 234
>sp|Q54PE0|PWP2_DICDI Periodic tryptophan protein 2 homolog OS=Dictyostelium discoideum
GN=pwp2 PE=3 SV=1
Length = 922
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 16/213 (7%)
Query: 120 HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA--AA 177
H K +LL G G L+++ LY+ L+ I +A +++G++L GC+
Sbjct: 282 HLKSKLLLVGFSTGQFILYEMPGFNQLYK--LNISSHGISTSAINNTGEWLAFGCSELGQ 339
Query: 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQ 236
+ VW+ I K + ++ NT VA+ D TI TG G V+ W+ +G
Sbjct: 340 LLVWEWRSETYILKQ---QGHSYNMNT----VAYSPDGQTIATGGEDGKVKIWNTTSGYC 392
Query: 237 WSDVKTHKKDILALTVS--EDENYLYCAGVDPTVVCFQ--RTRKPQVCSTSGPEQGSSVW 292
+ H+ + A+ S +N ++ AGVD T+ F R R + + Q S +
Sbjct: 393 YITFTEHEGPVTAVKYSPVSSQNVVFSAGVDGTIRAFDLVRYRNFRTFVSPNKTQFSCLA 452
Query: 293 VRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLS 325
V +I G + S ++ + +G L LS
Sbjct: 453 VDPSGEIIAAGSLDSFEIYVWSVRTGRLTDILS 485
>sp|Q42384|PRL1_ARATH Protein pleiotropic regulatory locus 1 OS=Arabidopsis thaliana
GN=PRL1 PE=1 SV=1
Length = 486
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 96/247 (38%), Gaps = 66/247 (26%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISE-------TPHVDRVFIGDPLSNSIECLTWFN 81
+ +A +P + AD++I+IWD++ T H+++V G +SN +
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVR-GLAVSNR-------H 230
Query: 82 DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141
+FS G D +++ CW L +K R + GH++
Sbjct: 231 TYMFSAG--------DDKQVK-----------CWDLEQNKVIR-----SYHGHLS----- 261
Query: 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAV-RVWDIHKGHAIHKMSLDKSSKF 200
+ C A H + D L+TG +V RVWDI I +S
Sbjct: 262 ---------------GVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALS------G 300
Query: 201 SKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLY 260
NT D ++TG ++FWD + G S + HKK + A+T+ EN
Sbjct: 301 HDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFA 360
Query: 261 CAGVDPT 267
A D T
Sbjct: 361 SASADNT 367
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 18/106 (16%)
Query: 219 TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQ 278
TG + ++ WD TGV + H + + L VS Y++ AG D V C+ +
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKV 252
Query: 279 VCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHG--NRLYSGGLDS 322
+ S G H V LALH + L +GG DS
Sbjct: 253 IRSYHG----------------HLSGVYCLALHPTLDVLLTGGRDS 282
>sp|Q26613|EMAP_STRPU 77 kDa echinoderm microtubule-associated protein
OS=Strongylocentrotus purpuratus GN=EMAP PE=2 SV=1
Length = 686
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 142/362 (39%), Gaps = 46/362 (12%)
Query: 148 EKLLDRQ--QGRILCTAWHSSGD-YLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNT 204
+KL D + Q +L +H D ++T + W+ G + K + K+ K
Sbjct: 233 KKLSDTKSSQDPVLACEYHPMNDEQIITLGKGHIHFWNTTGGKLVKKSGI--FEKYDKPK 290
Query: 205 AVWCVAFCADFTIITGDSGGFVRFWD-GKTGVQWSDVKTHKKDILALTVSEDENYLYCAG 263
V +AF + +ITGDS G + W G T + + + H+ I +L V D L G
Sbjct: 291 FVLSLAFTGNGDVITGDSNGNMYIWGKGNTRISQAILGAHEGGIFSLCVMNDGQILSGGG 350
Query: 264 VDPTVVC----FQRTRKPQVCSTSGP------EQGSSVWVRSVNRVIHEGDVKSLALHGN 313
D V+ +Q++ QV +GP +G +V + I G+ + N
Sbjct: 351 KDKKVILWTADYQQSEVTQVTEATGPVRTLCKGKGEDFYVGTTRNAILSGN---MGGEFN 407
Query: 314 RLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSL---G 370
L + L+ +P + L ++ D ++ + H +W+
Sbjct: 408 TLVQAHTEELWGLALHPTQGLF-----------LTCGYDKNVIMWDFEQHKPMWNKLMED 456
Query: 371 SAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSV--------VSNDGKYVAYST 422
QS + + S + + + + + T+ S DG ++A ++
Sbjct: 457 GCQSAGFHPSGAVVAIGMTSGRWVALDVESQDLITVHTDGKEQHDIIRYSPDGNFLAVAS 516
Query: 423 -ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDL 481
++ + ++S+ +G K S++ S TH+ SADST L + S + L D
Sbjct: 517 HDNYIYIYSVTEEGRK--YSKVGKCSG--HSSFVTHIDWSADSTKLQSNSGDYELLFWDA 572
Query: 482 SS 483
++
Sbjct: 573 AT 574
>sp|O02482|UNC37_CAEEL Transcription factor unc-37 OS=Caenorhabditis elegans GN=unc-37
PE=1 SV=1
Length = 612
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 20/181 (11%)
Query: 148 EKLLDRQQGRILCTAWHSSGDYLV-TGCAAAVRVWDIHKGH-----AIHKMSLDKSSKFS 201
+K ++ G ++C A S + V TG V++WD+ + +++ +
Sbjct: 314 KKKMELNHGEVVCAATISRDNSRVYTGGKGCVKIWDVKESDISGATVVNRPPIASLDCLK 373
Query: 202 KNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC 261
+N C F T++ G V WD T + D++T + AL +S DE L+
Sbjct: 374 ENYIRSCKLFEDGNTLLIGGEASTVALWDLTTETKTLDLETDSQACYALAMSPDEKLLFA 433
Query: 262 AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLD 321
D ++ + K +V + G + G+S L+ G +L+SGGLD
Sbjct: 434 CLADGNILIYDIHNKVKVGTLPGHQDGASCL--------------DLSKDGTKLWSGGLD 479
Query: 322 S 322
+
Sbjct: 480 N 480
Score = 33.5 bits (75), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 84/228 (36%), Gaps = 23/228 (10%)
Query: 50 IEIWDISETPHVDRVFIGDPLSNSIECL--------TWFND--RLFSGGLQGFVNEYDMR 99
++IWD+ E+ + P S++CL F D L GG V +D+
Sbjct: 345 VKIWDVKESDISGATVVNRPPIASLDCLKENYIRSCKLFEDGNTLLIGGEASTVALWDLT 404
Query: 100 RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRIL 159
S C+ L++ ++LL A G+I ++ I ++ + L Q
Sbjct: 405 TETKTLDLETDSQACYALAMSPDEKLLFACLADGNILIYDIHNK--VKVGTLPGHQDGAS 462
Query: 160 CTAWHSSGDYLVT-GCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA-DFTI 217
C G L + G +VR WD+ + + K + V+ + C D +
Sbjct: 463 CLDLSKDGTKLWSGGLDNSVRCWDLAQRKEVAKHDF--------ASQVFSLGCCPNDEWV 514
Query: 218 ITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD 265
G +V TG + + H+ +L+L + + G D
Sbjct: 515 AVGMENNYVEVLS-TTGKEKYQLTQHESCVLSLKFAHSGKFFISTGKD 561
>sp|P38129|TAF5_YEAST Transcription initiation factor TFIID subunit 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1
SV=1
Length = 798
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 160 CTAWHSSGDYLVTGCAAAV-RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I 217
C ++H +G Y+ TG + R+WD+ G ++ V +A C D +
Sbjct: 614 CVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLF-------LGHTAPVISIAVCPDGRWL 666
Query: 218 ITGDSGGFVRFWDGKTGVQWSDVKTHKKD-ILALTVSEDENYLYCAGVDPTV 268
TG G + WD TG + ++ H K+ I +L+ S++ N L G D TV
Sbjct: 667 STGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTV 718
>sp|Q15269|PWP2_HUMAN Periodic tryptophan protein 2 homolog OS=Homo sapiens GN=PWP2 PE=1
SV=2
Length = 919
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 14/226 (6%)
Query: 118 SVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176
+ HKK LL G G +L ++ + L++ + Q I A +SSGD++ GC+
Sbjct: 295 AFHKKSHLLVTGFASGIFHLHELPEFNLIHSLSISDQS--IASVAINSSGDWIAFGCSGL 352
Query: 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG 234
+ VW+ + L + F+ A+ A+ D I+TG G V+ W+ +G
Sbjct: 353 GQLLVWEWQSESYV----LKQQGHFNSMVAL---AYSPDGQYIVTGGDDGKVKVWNTLSG 405
Query: 235 VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCF--QRTRKPQVCSTSGPEQGSSVW 292
+ H + +T + + + +D TV F R R + ++ P Q S V
Sbjct: 406 FCFVTFTEHSSGVTGVTFTATGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRPTQFSCVA 465
Query: 293 VRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYP 338
V + ++ G S + + +G L LS P L P
Sbjct: 466 VDASGEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPISGLCFNP 511
>sp|Q5RFQ3|PWP2_PONAB Periodic tryptophan protein 2 homolog OS=Pongo abelii GN=PWP2 PE=2
SV=1
Length = 918
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 14/226 (6%)
Query: 118 SVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176
+ HKK LL G G +L ++ + L++ + Q I A +SSGD++ GC+
Sbjct: 292 AFHKKSHLLVTGFASGIFHLHELPEFNLIHSLSISDQS--IASVAINSSGDWIAFGCSGL 349
Query: 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG 234
+ VW+ + L + F+ A+ A+ D I+TG G V+ W+ +G
Sbjct: 350 GQLLVWEWQSESYV----LKQQGHFNSMVAL---AYSPDGQYIVTGGDDGKVKVWNTLSG 402
Query: 235 VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCF--QRTRKPQVCSTSGPEQGSSVW 292
+ H + +T + + + +D TV F R R + ++ P Q S V
Sbjct: 403 FCFVTFTEHSSGVTGVTFTATGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRPTQFSCVA 462
Query: 293 VRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYP 338
V + ++ G S + + +G L LS P L P
Sbjct: 463 VDASGEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPISGLCFNP 508
>sp|Q39190|PRL2_ARATH Protein pleiotropic regulator PRL2 OS=Arabidopsis thaliana GN=PRL2
PE=2 SV=2
Length = 479
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 93/245 (37%), Gaps = 67/245 (27%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISE-------TPHVDRVFIGDPLSNSIECLTWFN 81
+ +A +P + AD++I+IWD++ T H+ +V G +SN +
Sbjct: 173 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVR-GLAVSNR-------H 224
Query: 82 DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141
+FS G V CW L +K R + GH++
Sbjct: 225 TYMFSAGDDKQVK-------------------CWDLEQNKVIR-----SYHGHLH----- 255
Query: 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAV-RVWDIHKGHAIHKMSLDKSSKF 200
+ C A H + D ++TG +V RVWDI I + D S F
Sbjct: 256 ---------------GVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLPHD-SDVF 299
Query: 201 SKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLY 260
S +A D +ITG ++FWD + G + + HKK + A+ + EN
Sbjct: 300 S------VLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFV 353
Query: 261 CAGVD 265
A D
Sbjct: 354 SASAD 358
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 29/134 (21%)
Query: 140 ISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHA--IHKMSLDKS 197
S+ L L++R R WH A + + + +GH + ++ D S
Sbjct: 133 FSERNLSTAALMERMPSRWPRPEWH-----------APWKNYRVLQGHLGWVRSVAFDPS 181
Query: 198 SKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDEN 257
+++ FC TG + ++ WD TGV + H + L VS
Sbjct: 182 NEW----------FC------TGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 258 YLYCAGVDPTVVCF 271
Y++ AG D V C+
Sbjct: 226 YMFSAGDDKQVKCW 239
>sp|Q39221|STLP2_ARATH SEC12-like protein 2 OS=Arabidopsis thaliana GN=STL2P PE=1 SV=4
Length = 393
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 21/174 (12%)
Query: 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLV 171
G L+ + + +LAAG E G + +F+ L + + + C + SG +LV
Sbjct: 154 GQQLALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNE--SQAHSSVKCLTFSESGQFLV 211
Query: 172 TGCAAAVRVWDIHKGHAIHKMSLDK-----SSKFSKNTAVWCVAFCADFT-----IITGD 221
+ RVWD++ A+ +S +K S +FS ++A V + A T IIT D
Sbjct: 212 SLGGPVCRVWDVNASAAVASLSKEKDEMFASCRFSVDSAGNEVLYIAANTERGGSIITCD 271
Query: 222 SGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275
+ + W K WS K I A VS D L ++ V+ + TR
Sbjct: 272 T----KLWKRK----WSK-PIKKNSISAFNVSADGKLLAIGTLEGDVLILESTR 316
>sp|O75083|WDR1_HUMAN WD repeat-containing protein 1 OS=Homo sapiens GN=WDR1 PE=1 SV=4
Length = 606
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDP-LSNSIECLTWFNDRLFSG 87
I I+ P S+ L + D++ +IWD+S V +G L + CL W D L S
Sbjct: 237 IYAISWSPDSTHLLSASGDKTSKIWDVSVNSVVSTFPMGSTVLDQQLGCL-WQKDHLLSV 295
Query: 88 GLQGFVNEYDMRRLNIKSSTAVTSG---TCWCLSVHKK--KRLLAAGTEQGHINLF 138
L G++N D R N V G + CL+VHK K + +G+ GHIN +
Sbjct: 296 SLSGYINYLD--RNNPSKPLHVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYW 349
>sp|Q09715|TUP11_SCHPO Transcriptional repressor tup11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup11 PE=1 SV=1
Length = 614
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 158 ILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT- 216
+ C + ++G YL TGC A V+D+ G + + ++S S++ V +AF D
Sbjct: 316 VCCVKFSNNGKYLATGCNQAANVFDVQTGKKLFTLH-EESPDPSRDLYVRTIAFSPDGKY 374
Query: 217 IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268
++TG ++ WD T H++DI +L S + ++ D T
Sbjct: 375 LVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTA 426
Score = 41.2 bits (95), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 19/245 (7%)
Query: 23 APEPK---VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTW 79
+P+P + IA P L D+ I++WD+S T V VF G I L +
Sbjct: 354 SPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLS-TQKVRYVFSGH--EQDIYSLDF 410
Query: 80 FNDRLF--SGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINL 137
++ F SG +D+ + +G +++ + +A G+ I +
Sbjct: 411 SHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVT-AIAISPNDQFIAVGSLDQIIRV 469
Query: 138 FQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC-AAAVRVWDIHKGH-----AIHK 191
+ +S G L E+L ++ + A+ L++G ++VW++ AI
Sbjct: 470 WSVS--GTLVERLEGHKES-VYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKP 526
Query: 192 MSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILAL 250
+ K++ V VA D ++G ++FWD +TG + + HK ++++
Sbjct: 527 EGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISV 586
Query: 251 TVSED 255
S D
Sbjct: 587 CFSPD 591
>sp|Q8BU03|PWP2_MOUSE Periodic tryptophan protein 2 homolog OS=Mus musculus GN=Pwp2 PE=1
SV=1
Length = 919
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 14/224 (6%)
Query: 120 HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--A 177
HKK LL G G +L ++ + L++ + Q R+ A +SSGD++ GC+
Sbjct: 297 HKKTHLLVTGFASGIFHLHELPEFNLIHSLSISDQ--RVASVAINSSGDWIAFGCSGMGQ 354
Query: 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ 236
+ VW+ + L + F+ A+ A+ D I+TG G V+ W+ +G
Sbjct: 355 LLVWEWQSESYV----LKQQGHFNSMVAL---AYSPDGQYIVTGGDDGKVKVWNTLSGFC 407
Query: 237 WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCF--QRTRKPQVCSTSGPEQGSSVWVR 294
+ + H + +T + + + + +D TV F R R + ++ P Q S V V
Sbjct: 408 FVTLTEHSSGVTGVTFTTTGHVIVTSSLDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVD 467
Query: 295 SVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYP 338
S ++ G S + + +G L LS P L P
Sbjct: 468 SSGEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPVSGLCFNP 511
>sp|Q9C270|PWP2_NEUCR Periodic tryptophan protein 2 homolog OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=B18D24.40 PE=3 SV=1
Length = 899
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 14/233 (6%)
Query: 111 SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYL 170
S T C + H + LL AG G L+++ D +++ L Q I + SG++L
Sbjct: 254 SATVRCAAFHPESNLLVAGFSNGIFGLYEMPDFNMIHT--LSISQNEIDFVTINKSGEWL 311
Query: 171 VTGCA--AAVRVWDIHKGHAIHKMSLDKSSKF-SKNTAVWCVAFCADFTIITGDSGGFVR 227
G + + VW+ I L + F S N+ V+ I+T G ++
Sbjct: 312 AFGASKLGQLLVWEWQSESYI----LKQQGHFDSMNSLVYS---PDGQRIVTVADDGKIK 364
Query: 228 FWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQ 287
WD ++G H I A S+ N L+ + +D ++ + R + + PE+
Sbjct: 365 VWDTESGFCIVTFTEHTSGITACEFSKKGNVLFTSSLDGSIRAWDLIRYRNFRTFTAPER 424
Query: 288 --GSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYP 338
S + V ++ G V S +H + +G L LS P +L P
Sbjct: 425 LSFSCMAVDPSGEIVAAGSVDSFDIHIWSVQTGQLLDRLSGHEGPVSSLAFAP 477
>sp|Q9Y1C1|EMAP_LYTVA 77 kDa echinoderm microtubule-associated protein (Fragment)
OS=Lytechinus variegatus GN=EMAP PE=2 SV=1
Length = 664
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 136/354 (38%), Gaps = 46/354 (12%)
Query: 155 QGRILCTAWHSSGD-YLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213
Q +L +H D ++T + W+ G + K + K+ K + +AF
Sbjct: 220 QDPVLACEFHPMNDEQIITLGKGHIHFWNTAGGKLVKKSGI--FEKYDKPKFMLSLAFTG 277
Query: 214 DFTIITGDSGGFVRFWD-GKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVC-- 270
+ +ITGDS G + W G T + + + H+ I +L V D L G D VV
Sbjct: 278 NGDVITGDSNGNMYIWGKGNTRISQAVLGAHEGGIFSLCVMNDGQILSGGGKDKKVVLWT 337
Query: 271 --FQRTRKPQVCSTSGP------EQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDS 322
+Q++ QV +GP +G + +V + I GD + L +
Sbjct: 338 ADYQQSETTQVPEATGPVRTLCKGKGENFYVGTTRNAILSGD---MGGDFTTLVQAHTEE 394
Query: 323 YLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSL---GSAQSTDLSS 379
L+ +P + + ++ D +L + H + W+ QS
Sbjct: 395 LWGLALHPTQGMF-----------LTCGYDKNVILWDFEQHTQRWNKFMEDGCQSAGFHP 443
Query: 380 HSNTTGVPLLSFPRLIVKMSAVNNATIRCSV--------VSNDGKYVAYST-ESCVRLHS 430
+ + S + + + + + T+ S +G+Y+A ++ ++ + ++S
Sbjct: 444 SGEVVAIGMTSGRWVALDVESGDLYTVHTDGKEQHDIIRYSPNGEYLAVASHDNYIYIYS 503
Query: 431 LDLDGDK-PQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSS 483
+ G K ++ R S TH+ SADST L + S + L D +
Sbjct: 504 VKETGRKYSKVGRCSG-----HSSFVTHIDWSADSTKLQSNSGDYELLFWDAET 552
>sp|P91341|PWP2_CAEEL Periodic tryptophan protein 2 homolog OS=Caenorhabditis elegans
GN=F55F8.3 PE=3 SV=2
Length = 910
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 139/387 (35%), Gaps = 100/387 (25%)
Query: 120 HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA---- 175
HK+ +LA G I L +I L++ L + RI AW+ +GD+L GC
Sbjct: 282 HKETNILATAFNNGVIVLHEIPSFALVHN--LRVSEMRIQTVAWNLTGDWLAIGCGKGST 339
Query: 176 AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-TGDSGGFVRFWDGKTG 234
A + VW+ + K + + + + D +++ TG G V+ W+ ++
Sbjct: 340 AQLVVWEWQSESYVMKQQ-------AHSLRITTAEYSPDGSLMATGAEDGKVKIWNSRSS 392
Query: 235 VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVC--FQRTRKPQVCSTSGPEQGSSVW 292
H + A+ ++ + A +D TV +R R + P Q +++
Sbjct: 393 FCTVTFDEHTSGVTAVKWTQSGRAILSASLDGTVRAHDLKRYRNFRTLVCPEPTQLATLA 452
Query: 293 VRSVNRVI--------------------------HEGDVKSLALHGNRLYSGGLDSYLSL 326
V ++ HE + S+ +HGN + SG D
Sbjct: 453 VDKAGDLVIAGAKEVFNIYIWSFETGHLLDILSGHESAISSIDIHGNHIVSGSWDRT--- 509
Query: 327 SYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGV 386
+++W++ +Q+ +
Sbjct: 510 -------------------------------------IKMWTIVDSQAETVE-------- 524
Query: 387 PLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLD--LDGDKPQISR-- 442
+S L VK S + +V+++DG + + + L S+D LD D + SR
Sbjct: 525 --VSHEALDVKFSPAGD---EIAVLTSDGVITFFEAKEMINLGSIDTKLDTDPARGSRDT 579
Query: 443 IKNLPAPLFKSIFTHVLISADSTLLLA 469
I A K+ FT + S D LLLA
Sbjct: 580 ITRQSAAKTKT-FTRIRFSPDGNLLLA 605
>sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium
discoideum GN=tupA PE=2 SV=1
Length = 579
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 19/188 (10%)
Query: 158 ILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT- 216
+ C + + G YL TGC + +++D+ G +H +D+S K + + V F D
Sbjct: 284 VCCVNFSNDGKYLATGCNRSAQIYDVDTGKKVHAF-VDESEK-DGDLYIRSVCFSPDGNY 341
Query: 217 IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRK 276
+ TG V+ WD T H+ DI +L S D ++ D + +
Sbjct: 342 LATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKG 401
Query: 277 PQVCSTS------GPEQG-SSVWVRSVNRVIHEGDVKSL-----ALHGNRL--YSGGLDS 322
C+ + GP+ G +SV + R++ G + ++ A G L Y G LDS
Sbjct: 402 K--CAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDS 459
Query: 323 YLSLSYYP 330
S+++ P
Sbjct: 460 VYSVAFSP 467
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 24/241 (9%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLF--S 86
I + P + LA D+++++WDI T + F G L I L + +D F S
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDI-HTKKIQHTFYGHELD--IYSLDYSSDGRFIVS 386
Query: 87 GGLQGFVNEYDMRR----LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD 142
G +D+ + + + +++ RL+AAG+ N+ ++ D
Sbjct: 387 GSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLD---NIVRLWD 443
Query: 143 EGLLYEKLLDRQQGR---ILCTAWHSSGDYLVTGC-AAAVRVWDIHKGHAIHKMSLDKSS 198
Y L+R +G + A+ G L +G ++++WD+ + + +
Sbjct: 444 AQTGY--FLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDL----SGSRSRSRCRA 497
Query: 199 KFSKNTA-VWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDE 256
F+ + V VAF D + +I+G V+FWD + G ++ HK ++++ +S
Sbjct: 498 TFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKN 557
Query: 257 N 257
N
Sbjct: 558 N 558
Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 13/148 (8%)
Query: 126 LAAGTEQGHINLFQISDEGL---LYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVW 181
LA G E + ++ I + + Y LD I + S G ++V+G ++W
Sbjct: 342 LATGAEDKTVKVWDIHTKKIQHTFYGHELD-----IYSLDYSSDGRFIVSGSGDKKAKIW 396
Query: 182 DIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDS-GGFVRFWDGKTGVQWSDV 240
DI KG + + + V VA D ++ S VR WD +TG
Sbjct: 397 DIEKGKCAFTLG---NEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERY 453
Query: 241 KTHKKDILALTVSEDENYLYCAGVDPTV 268
+ H + ++ S D L +D ++
Sbjct: 454 EGHLDSVYSVAFSPDGKSLASGSLDKSL 481
>sp|Q6P6T4|EMAL2_RAT Echinoderm microtubule-associated protein-like 2 OS=Rattus
norvegicus GN=Eml2 PE=1 SV=1
Length = 649
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 135/339 (39%), Gaps = 46/339 (13%)
Query: 158 ILCTAWHSSGDYLVTGCAAA-VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT 216
+L +H + L+ C + + W + G+ + L + K K V CV F
Sbjct: 208 VLVATFHPTDPNLLITCGKSHIYFWSLEGGNLSKRQGLFE--KHEKPKYVLCVTFLEGGD 265
Query: 217 IITGDSGGFVRFWDGKTG--VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVC---- 270
++TGDSGG + W GK G + + H + AL D + G D VV
Sbjct: 266 VVTGDSGGNLYVW-GKGGNRITQEVLGAHDGGVFALCALRDGTLVSGGGRDRRVVLWGSD 324
Query: 271 FQRTRKPQVCSTSGP------EQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYL 324
+ + ++ +V GP +G +++V + I G V + + L G ++
Sbjct: 325 YSKVQEVEVPEDFGPVRTVAEGRGDTLYVGTTRNSILLGSVHTGF---SLLVQGHVEELW 381
Query: 325 SLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELW---------SLGSAQST 375
L+ +P +++ VS +D L +H +W S G S
Sbjct: 382 GLATHP-----------SRAQFVSCGQDKLVHLWSSETHQPVWSRSIEDPARSAGFHPSG 430
Query: 376 DLSSHSNTTGVPLL--SFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLD 432
+ + TG LL + R +V + N I S DG Y+A S ++ V ++++D
Sbjct: 431 SVLAVGTVTGRWLLLDTDTRDLVAIHTDGNEQISVVSFSPDGAYLAVGSHDNLVYVYTVD 490
Query: 433 LDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVS 471
G K +SR+ S TH+ + DST + S
Sbjct: 491 QGGRK--VSRLGKCSG--HSSFITHLDWAQDSTCFVTNS 525
>sp|Q61FW2|SEL10_CAEBR F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis
briggsae GN=sel-10 PE=3 SV=1
Length = 589
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 32/257 (12%)
Query: 74 IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG 133
I C+ ND L +G + + + +K + SG W + + R + +G+
Sbjct: 261 ITCMQIHNDLLVTGSDDNTLKVWSIDDGEVKHTLNGHSGGVWTSQISQCGRYIVSGSTDR 320
Query: 134 HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKM 192
+ +++ D LL+ L + C A ++ LVTG +RVWDI G +H
Sbjct: 321 TVKVWRAEDGFLLH--TLQGHTSTVRCMAMANT--TLVTGSRDCTLRVWDIETG--LHVR 374
Query: 193 SLDKSSKFSKNTAVWCVAFCADFTIITGDSGGF---VRFWDGKTGVQWSDVKTHKKDILA 249
+L AV CV F + + SGG+ V+ WD +G + H + +
Sbjct: 375 TLQ-----GHQAAVRCVQFDGNIVV----SGGYDFTVKIWDAFSGKCLRTLIGHSNRVYS 425
Query: 250 LTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLA 309
L + E E + C+G T + +V S PE + S + + G +
Sbjct: 426 L-LYESERSIVCSGSLDTSI--------RVWDFSRPEGQELIAFLSGHTSLTSG----MQ 472
Query: 310 LHGNRLYSGGLDSYLSL 326
L GN L S DS++ +
Sbjct: 473 LRGNILVSCNADSHVRV 489
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG 88
+ C+A ++ L D ++ +WDI HV R G ++ C+ + + + SGG
Sbjct: 343 VRCMAM--ANTTLVTGSRDCTLRVWDIETGLHV-RTLQGH--QAAVRCVQFDGNIVVSGG 397
Query: 89 LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-EGLLY 147
V +D + S + L ++ ++ +G+ I ++ S EG
Sbjct: 398 YDFTVKIWDAFSGKCLRTLIGHSNRVYSLLYESERSIVCSGSLDTSIRVWDFSRPEG--- 454
Query: 148 EKLLDRQQGRI-LCTAWHSSGDYLVTGCAAA-VRVWDIHKGHAIHKMSLDKSSKFSKNTA 205
++L+ G L + G+ LV+ A + VRVWDI++G IH +S +S A
Sbjct: 455 QELIAFLSGHTSLTSGMQLRGNILVSCNADSHVRVWDIYEGTCIHILSGHRS-------A 507
Query: 206 VWCVAFCADFTIITGDSGGFVRFWDGKTGV 235
+ + + + T G V+ WD + GV
Sbjct: 508 ITSLQWFGRGLVATSSDDGSVKLWDIERGV 537
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 29/121 (23%)
Query: 160 CTAWHSSGDYLVTGCA-AAVRVWDI-----------HKGHAIHKMSLDKSSKFSKNTAVW 207
CT +H + +Y+ TG A VR+WD+ HKG IH ++ + +F
Sbjct: 633 CTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLTFSPNGRF------- 684
Query: 208 CVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPT 267
+ TG + G V WD G+ ++K H + +L S D L +D T
Sbjct: 685 ---------LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNT 735
Query: 268 V 268
V
Sbjct: 736 V 736
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 29/154 (18%)
Query: 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLT 78
++ +A +NC P S+ +A AD+++ +WD+ V R+F G I LT
Sbjct: 621 LRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCV-RIFTGH--KGPIHSLT 677
Query: 79 WFNDRLF--SGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG------- 129
+ + F +G G V +D+ + + T L + +LA+G
Sbjct: 678 FSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVR 737
Query: 130 -----------------TEQGHINLFQISDEGLL 146
T GHINL + S E LL
Sbjct: 738 LWDAVKAFEDLETDDFTTATGHINLPENSQELLL 771
>sp|P53197|CDH1_YEAST APC/C activator protein CDH1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CDH1 PE=1 SV=1
Length = 566
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 49/263 (18%)
Query: 39 SRLAVSRADQSIEIWDISE-------TPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQG 91
S LAV +A+ +EI+D+ + + H+DRV CL+W N L SG
Sbjct: 315 SHLAVGQANGLVEIYDVMKRKCIRTLSGHIDRV----------ACLSWNNHVLTSGSRDH 364
Query: 92 FVNEYDMRRLN-----IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146
+ D+R + I+S T G W ++ +K LA+G +++++ + + +
Sbjct: 365 RILHRDVRMPDPFFETIESHTQEVCGLKWNVADNK----LASGGNDNVVHVYEGTSKSPI 420
Query: 147 YEKLLDRQQGRILCTAW--HSSGDYLVTGCAAA---VRVWDIHKGHAIHKMSLDKSSK-- 199
D + + AW H G L TG A +++W+++ +I +D S+
Sbjct: 421 L--TFDEHKAAVKAMAWSPHKRG-VLATGGGTADRRLKIWNVNT--SIKMSDIDSGSQIC 475
Query: 200 ---FSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDE 256
+SKNT + G S + WD + + +K H +L LT+S D
Sbjct: 476 NMVWSKNTN--------ELVTSHGYSKYNLTLWDCNSMDPIAILKGHSFRVLHLTLSNDG 527
Query: 257 NYLYCAGVDPTVVCFQRTRKPQV 279
+ D T+ ++ KP+
Sbjct: 528 TTVVSGAGDETLRYWKLFDKPKA 550
>sp|Q93794|SEL10_CAEEL F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans
GN=sel-10 PE=1 SV=3
Length = 587
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 115/284 (40%), Gaps = 30/284 (10%)
Query: 45 RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIK 104
RAD+ + W+ + P + + + I C+ +D L +G + + + + +
Sbjct: 232 RADKIEKNWNAN--PIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVM 289
Query: 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWH 164
+ +G W + + R + +G+ + ++ D LL+ L + C A
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHT--LQGHTSTVRCMA-- 345
Query: 165 SSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSG 223
+G LVTG +RVWD+ G + ++ + AV CV F T+++G
Sbjct: 346 MAGSILVTGSRDTTLRVWDVESGRHL-------ATLHGHHAAVRCVQFDG-TTVVSGGYD 397
Query: 224 GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCST 282
V+ W+ TG + H + +L + E E + C+G +D ++ + TR P+
Sbjct: 398 FTVKIWNAHTGRCIRTLTGHNNRVYSL-LFESERSIVCSGSLDTSIRVWDFTR-PEGQEC 455
Query: 283 SGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSL 326
QG H + L GN L S DS++ +
Sbjct: 456 VALLQG------------HTSLTSGMQLRGNILVSCNADSHVRV 487
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG 88
+ C+A S L D ++ +WD+ H+ + ++ C+ + + SGG
Sbjct: 341 VRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLH---GHHAAVRCVQFDGTTVVSGG 395
Query: 89 LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-EGLLY 147
V ++ + + + L ++ ++ +G+ I ++ + EG
Sbjct: 396 YDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC 455
Query: 148 EKLLDRQQGRILCTAWHSSGDYLVTGCAAA-VRVWDIHKGHAIHKMSLDKSSKFSKNTAV 206
LL Q L + G+ LV+ A + VRVWDIH+G +H +S +S A+
Sbjct: 456 VALL--QGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRS-------AI 506
Query: 207 WCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT 242
+ + + T G V+ WD + G D+ T
Sbjct: 507 TSLQWFGRNMVATSSDDGTVKLWDIERGALIRDLVT 542
>sp|P16649|TUP1_YEAST General transcriptional corepressor TUP1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TUP1 PE=1
SV=2
Length = 713
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 92/260 (35%), Gaps = 61/260 (23%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFS 86
I + P LA D+ I IWDI E + + G I L +F D+L S
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDI-ENRKIVMILQGH--EQDIYSLDYFPSGDKLVS 502
Query: 87 GGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146
G V +D+R + ++ G + +AAG+
Sbjct: 503 GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGS---------------- 546
Query: 147 YEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAV 206
LDR AVRVWD G + ++ + S +V
Sbjct: 547 ----LDR-----------------------AVRVWDSETGFLVERLDSENESGTGHKDSV 579
Query: 207 WCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKT------------HKKDILALTVS 253
+ V F D ++++G V+ W+ + SD KT HK +L++ +
Sbjct: 580 YSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT 639
Query: 254 EDENYLYCAGVDPTVVCFQR 273
+++ Y+ D V+ + +
Sbjct: 640 QNDEYILSGSKDRGVLFWDK 659
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 158 ILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNT 204
+ C + + G+YL TGC +V+ + G + ++S D ++ +N+
Sbjct: 347 VCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANNHRNS 393
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 94/236 (39%), Gaps = 20/236 (8%)
Query: 84 LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE 143
L +GG VN + + + N S + C+ + + + AG+ G + L+ +
Sbjct: 36 LATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAA 95
Query: 144 GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSK 202
+L + L + I +H G+YL +G + +++WD+ + + +
Sbjct: 96 KIL--RTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYK-------GH 146
Query: 203 NTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC 261
AV C+AF D + + V+ WD G ++ +H + + +E L
Sbjct: 147 TQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLAS 206
Query: 262 AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSV-----NRVIHEGDVKSLALHG 312
D TV + + + G +G + VRSV ++ G +L ++G
Sbjct: 207 GSADRTVKLWDLEKFNMI----GSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYG 258
Score = 36.6 bits (83), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 165 SSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAF-CADFTIITGDS 222
SSG L TG V +W + K + I MSL +AV C+ F ++ ++ G
Sbjct: 31 SSGRLLATGGEDCRVNIWAVSKPNCI--MSLT-----GHTSAVGCIQFNSSEERVVAGSL 83
Query: 223 GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRK 276
G +R WD + + HK I +L YL VD + + RK
Sbjct: 84 SGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRK 137
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 63/163 (38%), Gaps = 4/163 (2%)
Query: 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSG 87
+ CI R+ S+ +WD+ E + R +G S S + L SG
Sbjct: 65 AVGCIQFNSSEERVVAGSLSGSLRLWDL-EAAKILRTLMGHKASISSLDFHPMGEYLASG 123
Query: 88 GLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLY 147
+ + +D+RR + CL+ + LA+ ++ + L+ + ++
Sbjct: 124 SVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMIT 183
Query: 148 EKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAI 189
E + +H + L +G A V++WD+ K + I
Sbjct: 184 E--FTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMI 224
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 29/121 (23%)
Query: 160 CTAWHSSGDYLVTGCA-AAVRVWDI-----------HKGHAIHKMSLDKSSKFSKNTAVW 207
CT +H + +Y+ TG A VR+WD+ HKG IH ++ + +F
Sbjct: 632 CTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLTFSPNGRF------- 683
Query: 208 CVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPT 267
+ TG + G V WD G+ ++K H + +L S D L +D T
Sbjct: 684 ---------LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNT 734
Query: 268 V 268
V
Sbjct: 735 V 735
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 29/154 (18%)
Query: 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLT 78
++ +A +NC P S+ +A AD+++ +WD+ V R+F G I LT
Sbjct: 620 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV-RIFTGH--KGPIHSLT 676
Query: 79 WF-NDR-LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG------- 129
+ N R L +G G V +D+ + + T L + +LA+G
Sbjct: 677 FSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVR 736
Query: 130 -----------------TEQGHINLFQISDEGLL 146
T GHINL + S E LL
Sbjct: 737 LWDAIKAFEDLETDDFTTATGHINLPENSQELLL 770
>sp|Q12834|CDC20_HUMAN Cell division cycle protein 20 homolog OS=Homo sapiens GN=CDC20
PE=1 SV=2
Length = 499
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 116/261 (44%), Gaps = 28/261 (10%)
Query: 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFS 86
+ I+ +A + + LAV + +++WD+ + R+ S + L+W + L S
Sbjct: 227 EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ---KRLRNMTSHSARVGSLSWNSYILSS 283
Query: 87 GGLQGFVNEYDMR--RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS--D 142
G G ++ +D+R ++ + + + C L R LA+G +N++ + +
Sbjct: 284 GSRSGHIHHHDVRVAEHHVATLSGHSQEVC-GLRWAPDGRHLASGGNDNLVNVWPSAPGE 342
Query: 143 EGLLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAAA---VRVWDIHKGHAIHKMSLDKSS 198
G + + + QG + AW + L TG + +R+W++ G + ++D S
Sbjct: 343 GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL--SAVDAHS 400
Query: 199 KFSKNTAVWCVAFCADFTIITGDSGGFVR----FWDGKTGVQWSDVKTHKKDILALTVSE 254
+ + +W + +I+G GF + W T + +++K H +L+LT+S
Sbjct: 401 QVC--SILWSPHY---KELISGH--GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP 453
Query: 255 DENYLYCAGVDPTV---VCFQ 272
D + A D T+ CF+
Sbjct: 454 DGATVASAAADETLRLWRCFE 474
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 25/190 (13%)
Query: 135 INLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAA-VRVWDIHKGHAIHKMS 193
+ L+ S +L +++ I AW G+YL G ++A V++WD+ + + M+
Sbjct: 206 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 265
Query: 194 LDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQW-SDVKTHKKDILALTV 252
S + V +++ + + + +G G + D + + + H +++ L
Sbjct: 266 -------SHSARVGSLSWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW 317
Query: 253 SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLA--- 309
+ D +L G D V + S P +G WV H+G VK++A
Sbjct: 318 APDGRHLASGGNDNLVNVW----------PSAPGEGG--WVPLQTFTQHQGAVKAVAWCP 365
Query: 310 LHGNRLYSGG 319
N L +GG
Sbjct: 366 WQSNVLATGG 375
>sp|Q62623|CDC20_RAT Cell division cycle protein 20 homolog OS=Rattus norvegicus
GN=Cdc20 PE=1 SV=2
Length = 499
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 115/259 (44%), Gaps = 28/259 (10%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG 88
I+ +A + + LAV ++ +++WD+ + R+ S + L+W + L SG
Sbjct: 229 ISSVAWIKEGNYLAVGTSNAEVQLWDVQQQ---KRLRNMTSHSARVSSLSWNSYILSSGS 285
Query: 89 LQGFVNEYDMR--RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ--ISDEG 144
G ++ +D+R ++ + + + C L R LA+G +N++ + G
Sbjct: 286 RSGHIHHHDVRVAEHHVATLSGHSQEVC-GLRWAPDGRHLASGGNDNIVNVWPSGPGESG 344
Query: 145 LLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAAA---VRVWDIHKGHAIHKMSLDKSSKF 200
+ + + QG + AW + L TG + +R+W++ G + ++D S+
Sbjct: 345 WVPLQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACL--SAVDVHSQV 402
Query: 201 SKNTAVWCVAFCADFTIITGDSGGFVR----FWDGKTGVQWSDVKTHKKDILALTVSEDE 256
+ +W + +I+G GF + W T + +++K H +L+LT+S D
Sbjct: 403 C--SILWSPHY---KELISGH--GFAQNQLVIWKYPTMAKVAELKGHTARVLSLTMSPDG 455
Query: 257 NYLYCAGVDPTV---VCFQ 272
+ A D T+ CF+
Sbjct: 456 ATVASAAADETLRLWRCFE 474
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 12/164 (7%)
Query: 125 LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC-AAAVRVWDI 183
L+AAG G I L+ + + ++ + L + + +H G++ +G +++WDI
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIV--RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Query: 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT 242
K IH V + F D +++G V+ WD G ++ K+
Sbjct: 131 RKKGCIHTYK-------GHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS 183
Query: 243 HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPE 286
H+ I +L E +L G V F ++ + GPE
Sbjct: 184 HEGQIQSLDFHPHE-FLLATGSADRTVKFWDLETFELIGSGGPE 226
>sp|O74319|TAF73_SCHPO Transcription initiation factor TFIID subunit taf73
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf73 PE=1 SV=1
Length = 642
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 9/116 (7%)
Query: 155 QGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213
Q + C ++H + YL TG + R+WD+ G + + + ++ V + A
Sbjct: 487 QNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFN-------AHHSPVSALCMSA 539
Query: 214 D-FTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268
D ++ + D G ++ WD ++ Q H + +L+ S D L G D V
Sbjct: 540 DGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDV 595
Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG 88
++C++ P ++ LA +D + +WD+ T RVF S C++ L S
Sbjct: 490 VDCVSFHPNAAYLATGSSDHTTRMWDV-RTGGTVRVFNAHHSPVSALCMSADGLSLASAD 548
Query: 89 LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141
G + +D+R N S S + LS ++L +G +N + ++
Sbjct: 549 ESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWDLT 601
>sp|Q95RJ9|EBI_DROME F-box-like/WD repeat-containing protein ebi OS=Drosophila
melanogaster GN=ebi PE=1 SV=2
Length = 700
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 19/136 (13%)
Query: 149 KLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKG----------HAIHKMSLDKS 197
++L + + AW+ S D L +G + R+WD+ H I K +
Sbjct: 349 RVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVP 408
Query: 198 SKFSKNTAVWCVAFCADFTIITGDSGGFVRFW--DGKTGVQWSDVKTHKKDILALTVSED 255
S + W C + TG G+ R W DG+ S + HK I AL ++
Sbjct: 409 SNKDVTSLDW---NCDGSLLATGSYDGYARIWKTDGRLA---STLGQHKGPIFALKWNKC 462
Query: 256 ENYLYCAGVDPTVVCF 271
NY+ AGVD T + +
Sbjct: 463 GNYILSAGVDKTTIIW 478
>sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protein C227.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC227.12 PE=4 SV=1
Length = 462
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 101/249 (40%), Gaps = 44/249 (17%)
Query: 114 CWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG 173
C ++ LA G + L++ S L L+ R+ A+H SGDYLV+
Sbjct: 226 CQAWDADSEQLTLATGAADNTVCLWKASQSTPLLR--LEGHLARVGRVAFHPSGDYLVSA 283
Query: 174 CAAAV-RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-TGDSGGFVRFWDG 231
R+WD+H G ++ + + ++ +A D +++ +G + R WD
Sbjct: 284 SFDTTWRLWDVHTG-------VELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDL 336
Query: 232 KTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV----------------------- 268
++G + H + I+A+ S + L + D TV
Sbjct: 337 RSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSD 396
Query: 269 VCFQRTRKPQVCSTSGPEQGSSVW-------VRSVNRVIHEGDVKSLALHGNRLYSGGLD 321
V + + + +TSG + +W ++S+ V HE V S+ +G+R S G D
Sbjct: 397 VRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSM--VGHEEKVMSVDGYGDRFISSGYD 454
Query: 322 SYLSLSYYP 330
+ L +YP
Sbjct: 455 RTIKL-WYP 462
>sp|Q6CB13|MDV1_YARLI Mitochondrial division protein 1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=MDV1 PE=3 SV=1
Length = 565
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 36/227 (15%)
Query: 71 SNSIECLTW---FNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLA 127
S+S+ CL + F + S G+ + +D+ R ++ + + + CL V +LA
Sbjct: 258 SDSVTCLDFDIPFG-TMVSAGMDLGLKVWDLSRGDLVTDLKGHNASVTCLQVDNN--VLA 314
Query: 128 AGTEQGHI---NLFQI------SDEG--LLYEKLLDRQQGRILCTAWHSSGDYLVTGCA- 175
G+ I NL Q+ DEG +LD G I +A H S LV+G A
Sbjct: 315 TGSADATIRVWNLDQVVSNPDAQDEGDDAYTIHVLDSHVGEI--SAIHFSDHTLVSGSAD 372
Query: 176 AAVRVWDIHKGHAIHKMSL-------------DK-SSKFSKNTAVWCVAFCADFTIITGD 221
+R WD++ G + + + D+ + F N C D + TG
Sbjct: 373 KTIRQWDLNTGRCVQTLDVIWANSAQNALYSNDRLRTGFDANAPFIGAVQCRDAALATGT 432
Query: 222 SGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268
+ G VR WD ++G ++ H + L D+ +L D +V
Sbjct: 433 ADGIVRLWDLRSGQVQRTLQGHTAAVTCLQF--DDVHLATGSRDRSV 477
>sp|Q922B6|TRAF7_MOUSE E3 ubiquitin-protein ligase TRAF7 OS=Mus musculus GN=Traf7 PE=1
SV=1
Length = 594
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 117/280 (41%), Gaps = 35/280 (12%)
Query: 46 ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLN-IK 104
+D++I++WD T + G + L +L+SG + +D++ L +
Sbjct: 340 SDKTIKVWDTCTTYKCQKTLEGH--DGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVN 397
Query: 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWH 164
+ A + C +S H +L +G+ + I ++ I L +K L + A
Sbjct: 398 TIRAHDNPVCTLVSSHN---MLFSGSLKA-IKVWDIVGTELKLKKELTGLNHWV--RALV 451
Query: 165 SSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGG 224
++ YL +G +++WDI IH + S +S AV + I+ G
Sbjct: 452 AAQSYLYSGSYQTIKIWDIRTLDCIHVLQTSGGSVYS--IAV------TNHHIVCGTYEN 503
Query: 225 FVRFWDGKTGVQWSDVKTHKKDILALTV--SEDENYLYCAGVDPTVVCFQRTRKPQVCST 282
+ WD ++ Q + H + AL V + D+ ++ A D ++ + + +C+
Sbjct: 504 LIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVW--SMDNMICTQ 561
Query: 283 SGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDS 322
+ + H+G V +LA+ RL+SG +DS
Sbjct: 562 T--------------LLRHQGSVTALAVSRGRLFSGAVDS 587
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 102/249 (40%), Gaps = 27/249 (10%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFND--RLFS 86
+ +A P + LA D ++ +WD++ VF G ++ + + + D + S
Sbjct: 504 VRAVAFSPDGALLASGSDDATVRLWDVAAA-EERAVFEGH--THYVLDIAFSPDGSMVAS 560
Query: 87 GGLQGFVNEYDMRRLNIKSST--AVTSG---TCWCLSVHKKKRLLAAGTEQGHINLFQIS 141
G G R N+ + T AV G + ++ ++A+G+ G I L+ ++
Sbjct: 561 GSRDGTA-----RLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVA 615
Query: 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFS 201
+L ++ A+ G LV G + V +WD+ G A+H F
Sbjct: 616 TG--KERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALH--------TFE 665
Query: 202 KNTA-VWCVAFCADFTII-TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYL 259
+T V VAF D ++ +G +R WD + + ++ H + + ++ + L
Sbjct: 666 GHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTL 725
Query: 260 YCAGVDPTV 268
A D T+
Sbjct: 726 ASASEDGTI 734
>sp|Q6TEN6|WDR91_DANRE WD repeat-containing protein 91 OS=Danio rerio GN=wdr91 PE=1 SV=2
Length = 724
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 30/171 (17%)
Query: 121 KKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA---- 176
K RLL G+ G + L+ + LYE +D RIL A SG V AA
Sbjct: 444 KPDRLLLLGSGVGTVKLYDTDAKKCLYEMTIDDVHPRILSLACSPSGTSFVCSAAAHSGA 503
Query: 177 --------------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD 221
+ +WD + +L+ A+ C AF + ++TG
Sbjct: 504 VMESEPRGSAPVSGQLLLWDTKTVKQQLQFALEPGP-----VAINCTAFNHNGNLLVTGA 558
Query: 222 SGGFVRFWDGK---TGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVV 269
+ G +R +D + + + W K H ++ ++ S DEN ++ G D V
Sbjct: 559 ADGIIRLFDMQRYESALSW---KAHDGEVYSVEFSYDENTVFSIGEDGKFV 606
>sp|Q6CJ50|MDV1_KLULA Mitochondrial division protein 1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=MDV1 PE=3 SV=1
Length = 705
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 170 LVTGCAAA-VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRF 228
L TG VR+WD+ G + + A+ + F + ++TG +R
Sbjct: 570 LATGTKDGIVRLWDLRSGKVVRMLE-------GHTDAITSLQFDS-VNLVTGAMDRSIRI 621
Query: 229 WDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQ-VCSTSGPEQ 287
WD +TG+ SDV +++ I +L D+ + + +PTV + R C PEQ
Sbjct: 622 WDLRTGI-LSDVFAYEQPITSLHFDLDK--IVISNNEPTVKIYNRKDGNHWFCGEDDPEQ 678
Query: 288 GSSVWVRSVNRVIHEG 303
G+ +VR + + EG
Sbjct: 679 GNVDFVRYKHGYLVEG 694
>sp|Q9JJ66|CDC20_MOUSE Cell division cycle protein 20 homolog OS=Mus musculus GN=Cdc20
PE=1 SV=2
Length = 499
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 113/259 (43%), Gaps = 28/259 (10%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG 88
I+ +A + + LAV ++ +++WD+ + R+ S + L+W + L SG
Sbjct: 229 ISSVAWIKEGNYLAVGTSNAEVQLWDVQQQ---KRLRNMTSHSARVSSLSWNSYILSSGS 285
Query: 89 LQGFVNEYDMR--RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ--ISDEG 144
G ++ +D+R ++ + + + C L R LA+G +N++ + G
Sbjct: 286 RSGHIHHHDVRVAEHHVATLSGHSQEVC-GLRWAPDGRHLASGGNDNIVNVWPSGPGESG 344
Query: 145 LLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAAA---VRVWDIHKGHAIHKMSLDKSSKF 200
+ + QG + AW + L TG + +R+W++ G + ++D S+
Sbjct: 345 WAPLQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACL--SAVDVHSQV 402
Query: 201 SKNTAVWCVAFCADFTIITGDSGGFVR----FWDGKTGVQWSDVKTHKKDILALTVSEDE 256
+ +W + +I+G GF + W T + +++K H +L LT+S D
Sbjct: 403 C--SILWSPHY---KELISGH--GFAQNQLVIWKYPTMAKVAELKGHTARVLGLTMSPDG 455
Query: 257 NYLYCAGVDPTV---VCFQ 272
+ A D T+ CF+
Sbjct: 456 ATVASAAADETLRLWRCFE 474
>sp|Q7ZVA0|SMU1_DANRE WD40 repeat-containing protein SMU1 OS=Danio rerio GN=smu1 PE=2
SV=1
Length = 513
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 154 QQGRILCTAWHSSGDYLVTGCAAA-VRVWDIHKGHAIHKMSLDKSSKFSK-NTAVWCVAF 211
Q+ + C + G YLVTG + VW+ G + F + AV C++F
Sbjct: 213 QKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSF 272
Query: 212 CADFTII-TGDSGGFVRFWDGKTGVQWSDV-KTHKKDILALTVSEDENYLYCAGVDPTV 268
D ++ TG G ++ W ++G + H K + L+ S+D + A D T+
Sbjct: 273 SRDTEMLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKDSTQILSASFDQTI 331
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 194 LDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252
L + KF + + V C F D ++TG GF+ W+ TG D+K +D
Sbjct: 205 LARHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQD------ 258
Query: 253 SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW 292
N++ +D V+C +R ++ +T + VW
Sbjct: 259 ----NFMM---MDDAVLCMSFSRDTEMLATGAQDGKIKVW 291
>sp|Q6PBD6|WDR61_XENTR WD repeat-containing protein 61 OS=Xenopus tropicalis GN=wdr61 PE=2
SV=1
Length = 305
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 9/159 (5%)
Query: 115 WCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174
W + + L+ +G+ + +++ SDE L + L+ Q ++ SG+ + +
Sbjct: 24 WGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSS 83
Query: 175 AAA-VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGK 232
A +R+WD+ G I + + W VAF D + TG G V + +
Sbjct: 84 LDAHIRLWDLESGKQIRAID-------AGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVE 136
Query: 233 TGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCF 271
TG + + T K IL++ S D YL +D + F
Sbjct: 137 TGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
>sp|Q6NRT3|SMU1_XENLA WD40 repeat-containing protein SMU1 OS=Xenopus laevis GN=smu1 PE=2
SV=1
Length = 513
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 154 QQGRILCTAWHSSGDYLVTGCAAA-VRVWDIHKGHAIHKMSLDKSSKF-SKNTAVWCVAF 211
Q+ + C + G YLVTG + VW+ G + F + AV C+ F
Sbjct: 213 QKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCF 272
Query: 212 CADFTII-TGDSGGFVRFWDGKTGVQWSDV-KTHKKDILALTVSEDENYLYCAGVDPTV 268
D ++ TG G ++ W ++G + H K + L+ S+D + + A D T+
Sbjct: 273 SRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Score = 37.7 bits (86), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 194 LDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252
L + KF + + V C F D ++TG GF+ W+ TG D+K +D
Sbjct: 205 LSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQD------ 258
Query: 253 SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW 292
N++ +D V+C +R ++ +T + VW
Sbjct: 259 ----NFMM---MDDAVLCMCFSRDTEMLATGAQDGKIKVW 291
>sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b
PE=2 SV=1
Length = 470
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 10/157 (6%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDR---LF 85
+ C P +A D+++ IWDI+ ++ SN ++ FN +
Sbjct: 147 VRCARFSPDGRLIASCSDDKTVRIWDITNRLCINTFVDYKGHSNYVD----FNPMGTCVA 202
Query: 86 SGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL 145
S G+ V +D+R + V + LS H L + G + + + + L
Sbjct: 203 SAGVDSTVKVWDIRTNKLLQHYQVHNAGVNSLSFHPSGNYLLTASNDGTVKILDLLEGRL 262
Query: 146 LYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVW 181
+Y L QG +L A+ SGD +G A V VW
Sbjct: 263 IY--TLHGHQGPVLSVAFSKSGDQFASGATDAQVLVW 297
Score = 33.9 bits (76), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 104/299 (34%), Gaps = 46/299 (15%)
Query: 36 PKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNE 95
P +LA S AD + IW+ R + ++ C+ + SG L ++
Sbjct: 28 PDGKQLASSSADACVMIWNFKPQ---SRAYKYPGHKEAVTCVQFSP----SGHLVASSSK 80
Query: 96 YDMRRL---NIKSSTAVT---SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK 149
RL NIK ++V + C++ ++ I + + + LY
Sbjct: 81 DRTVRLWAPNIKGESSVLKAHTAVVRCVNFSSDGHTFITASDDKSIKAWNLHRQRFLYS- 139
Query: 150 LLDRQQGRILCTAWHSSGDYLVTGCA--AAVRVWDIHKGHAIHKMSLDK--SSKFSKNTA 205
L + C + G L+ C+ VR+WDI I+ K S+ N
Sbjct: 140 -LTEHTNWVRCARFSPDG-RLIASCSDDKTVRIWDITNRLCINTFVDYKGHSNYVDFNPM 197
Query: 206 VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD 265
CVA + V+ WD +T + H + +L+ NYL A D
Sbjct: 198 GTCVA--------SAGVDSTVKVWDIRTNKLLQHYQVHNAGVNSLSFHPSGNYLLTASND 249
Query: 266 PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL--HGNRLYSGGLDS 322
TV + + G H+G V S+A G++ SG D+
Sbjct: 250 GTVKILDLLEGRLIYTLHG----------------HQGPVLSVAFSKSGDQFASGATDA 292
>sp|Q3UKJ7|SMU1_MOUSE WD40 repeat-containing protein SMU1 OS=Mus musculus GN=Smu1 PE=2
SV=2
Length = 513
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 154 QQGRILCTAWHSSGDYLVTGCAAA-VRVWDIHKGHAIHKMSLDKSSKFSK-NTAVWCVAF 211
Q+ + C + G YLVTG + VW+ G + F + AV C+ F
Sbjct: 213 QKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCF 272
Query: 212 CADFTII-TGDSGGFVRFWDGKTGVQWSDV-KTHKKDILALTVSEDENYLYCAGVDPTV 268
D ++ TG G ++ W ++G + H K + L+ S+D + + A D T+
Sbjct: 273 SRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 194 LDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252
L + KF + + V C F D ++TG GF+ W+ TG D+K +D
Sbjct: 205 LSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQD------ 258
Query: 253 SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW 292
N++ +D V+C +R ++ +T + VW
Sbjct: 259 ----NFMM---MDDAVLCMCFSRDTEMLATGAQDGKIKVW 291
>sp|Q2TAY7|SMU1_HUMAN WD40 repeat-containing protein SMU1 OS=Homo sapiens GN=SMU1 PE=1
SV=2
Length = 513
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 154 QQGRILCTAWHSSGDYLVTGCAAA-VRVWDIHKGHAIHKMSLDKSSKFSK-NTAVWCVAF 211
Q+ + C + G YLVTG + VW+ G + F + AV C+ F
Sbjct: 213 QKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCF 272
Query: 212 CADFTII-TGDSGGFVRFWDGKTGVQWSDV-KTHKKDILALTVSEDENYLYCAGVDPTV 268
D ++ TG G ++ W ++G + H K + L+ S+D + + A D T+
Sbjct: 273 SRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 194 LDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252
L + KF + + V C F D ++TG GF+ W+ TG D+K +D
Sbjct: 205 LSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQD------ 258
Query: 253 SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW 292
N++ +D V+C +R ++ +T + VW
Sbjct: 259 ----NFMM---MDDAVLCMCFSRDTEMLATGAQDGKIKVW 291
>sp|Q76B40|SMU1_CRIGR WD40 repeat-containing protein SMU1 OS=Cricetulus griseus GN=SMU1
PE=2 SV=1
Length = 513
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 154 QQGRILCTAWHSSGDYLVTGCAAA-VRVWDIHKGHAIHKMSLDKSSKFSK-NTAVWCVAF 211
Q+ + C + G YLVTG + VW+ G + F + AV C+ F
Sbjct: 213 QKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCF 272
Query: 212 CADFTII-TGDSGGFVRFWDGKTGVQWSDV-KTHKKDILALTVSEDENYLYCAGVDPTV 268
D ++ TG G ++ W ++G + H K + L+ S+D + + A D T+
Sbjct: 273 SRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 194 LDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252
L + KF + + V C F D ++TG GF+ W+ TG D+K +D
Sbjct: 205 LSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQD------ 258
Query: 253 SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW 292
N++ +D V+C +R ++ +T + VW
Sbjct: 259 ----NFMM---MDDAVLCMCFSRDTEMLATGAQDGKIKVW 291
>sp|Q2TBS9|SMU1_BOVIN WD40 repeat-containing protein SMU1 OS=Bos taurus GN=SMU1 PE=2 SV=1
Length = 513
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 154 QQGRILCTAWHSSGDYLVTGCAAA-VRVWDIHKGHAIHKMSLDKSSKFSK-NTAVWCVAF 211
Q+ + C + G YLVTG + VW+ G + F + AV C+ F
Sbjct: 213 QKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCF 272
Query: 212 CADFTII-TGDSGGFVRFWDGKTGVQWSDV-KTHKKDILALTVSEDENYLYCAGVDPTV 268
D ++ TG G ++ W ++G + H K + L+ S+D + + A D T+
Sbjct: 273 SRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 194 LDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252
L + KF + + V C F D ++TG GF+ W+ TG D+K +D
Sbjct: 205 LSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQD------ 258
Query: 253 SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW 292
N++ +D V+C +R ++ +T + VW
Sbjct: 259 ----NFMM---MDDAVLCMCFSRDTEMLATGAQDGKIKVW 291
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 262,108,329
Number of Sequences: 539616
Number of extensions: 10689581
Number of successful extensions: 26706
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 437
Number of HSP's that attempted gapping in prelim test: 25642
Number of HSP's gapped (non-prelim): 1411
length of query: 708
length of database: 191,569,459
effective HSP length: 125
effective length of query: 583
effective length of database: 124,117,459
effective search space: 72360478597
effective search space used: 72360478597
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)