Query psy12614
Match_columns 708
No_of_seqs 860 out of 3834
Neff 11.5
Searched_HMMs 29240
Date Fri Aug 16 23:47:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12614.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12614hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ymu_A WD-40 repeat protein; u 100.0 8.5E-71 2.9E-75 595.9 70.8 524 15-620 5-577 (577)
2 1nr0_A Actin interacting prote 100.0 4E-67 1.4E-71 566.9 65.1 530 23-622 15-610 (611)
3 1nr0_A Actin interacting prote 100.0 8.7E-64 3E-68 540.9 62.9 494 17-569 50-610 (611)
4 2ymu_A WD-40 repeat protein; u 100.0 5.1E-62 1.7E-66 527.2 67.5 485 63-622 10-538 (577)
5 3sfz_A APAF-1, apoptotic pepti 100.0 8.2E-62 2.8E-66 572.4 62.1 549 19-622 608-1248(1249)
6 1pgu_A Actin interacting prote 100.0 1.5E-59 5.3E-64 512.4 58.0 517 17-623 54-614 (615)
7 1pgu_A Actin interacting prote 100.0 2.3E-57 7.9E-62 495.3 64.8 541 23-682 15-612 (615)
8 2oaj_A Protein SNI1; WD40 repe 100.0 2.2E-57 7.4E-62 507.4 63.5 567 14-632 6-792 (902)
9 3sfz_A APAF-1, apoptotic pepti 100.0 6.6E-56 2.2E-60 522.2 52.7 491 18-569 649-1248(1249)
10 2oaj_A Protein SNI1; WD40 repe 100.0 3.2E-51 1.1E-55 457.7 60.2 514 64-625 12-734 (902)
11 3mkq_A Coatomer beta'-subunit; 100.0 2.9E-51 9.9E-56 462.0 51.5 473 15-566 2-501 (814)
12 3mkq_A Coatomer beta'-subunit; 100.0 1.3E-48 4.6E-53 440.2 48.2 462 63-619 7-501 (814)
13 1vyh_C Platelet-activating fac 100.0 2.8E-44 9.4E-49 368.4 39.5 282 20-329 102-409 (410)
14 3ow8_A WD repeat-containing pr 100.0 1.4E-43 4.9E-48 349.8 41.7 285 19-330 25-320 (321)
15 2ynn_A Coatomer subunit beta'; 100.0 3.5E-43 1.2E-47 345.0 41.4 290 15-331 2-302 (304)
16 1got_B GT-beta; complex (GTP-b 100.0 2.8E-42 9.6E-47 344.5 44.9 287 13-328 42-340 (340)
17 4gqb_B Methylosome protein 50; 100.0 2.8E-42 9.7E-47 342.7 35.8 283 23-333 27-333 (344)
18 2pbi_B Guanine nucleotide-bind 100.0 2.5E-41 8.6E-46 339.0 43.0 291 10-328 48-354 (354)
19 3fm0_A Protein CIAO1; WDR39,SG 100.0 6.2E-41 2.1E-45 335.3 42.3 303 16-333 5-337 (345)
20 1vyh_C Platelet-activating fac 100.0 5.3E-41 1.8E-45 344.0 39.6 280 64-431 103-409 (410)
21 4ery_A WD repeat-containing pr 100.0 2.4E-40 8.3E-45 327.1 42.5 285 19-330 16-311 (312)
22 3ow8_A WD repeat-containing pr 100.0 1.5E-40 5.3E-45 328.1 40.9 282 63-432 26-320 (321)
23 4g56_B MGC81050 protein; prote 100.0 1.5E-41 5E-46 340.9 33.2 285 22-332 38-344 (357)
24 3frx_A Guanine nucleotide-bind 100.0 7.8E-40 2.7E-44 323.4 41.2 286 16-331 7-317 (319)
25 3iz6_a 40S ribosomal protein R 100.0 4.5E-41 1.5E-45 341.2 33.0 290 15-332 55-376 (380)
26 1erj_A Transcriptional repress 100.0 1.5E-39 5.2E-44 331.6 42.6 287 24-331 62-389 (393)
27 2xzm_R RACK1; ribosome, transl 100.0 1.4E-39 4.9E-44 325.5 40.1 298 14-331 9-340 (343)
28 1got_B GT-beta; complex (GTP-b 100.0 3.7E-39 1.3E-43 321.9 41.5 284 101-430 45-340 (340)
29 2hes_X YDR267CP; beta-propelle 100.0 5.4E-39 1.8E-43 319.1 41.0 288 18-331 6-328 (330)
30 3fm0_A Protein CIAO1; WDR39,SG 100.0 1E-38 3.5E-43 319.2 42.6 312 63-433 9-335 (345)
31 2ynn_A Coatomer subunit beta'; 100.0 8.3E-39 2.8E-43 313.9 40.2 284 62-371 6-302 (304)
32 1gxr_A ESG1, transducin-like e 100.0 3.7E-39 1.3E-43 322.9 37.9 317 25-432 8-336 (337)
33 1r5m_A SIR4-interacting protei 100.0 2.9E-39 9.9E-44 335.1 38.0 339 23-432 42-424 (425)
34 2pm9_A Protein WEB1, protein t 100.0 5.2E-41 1.8E-45 347.1 22.0 359 27-433 13-414 (416)
35 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.5E-38 2.2E-42 326.2 45.2 322 18-433 110-442 (445)
36 2hes_X YDR267CP; beta-propelle 100.0 2.3E-38 7.7E-43 314.6 39.8 296 63-433 8-328 (330)
37 2pbi_B Guanine nucleotide-bind 100.0 4.2E-38 1.4E-42 315.6 41.1 282 63-430 58-354 (354)
38 3vl1_A 26S proteasome regulato 100.0 7.4E-39 2.5E-43 331.2 36.6 320 27-371 57-419 (420)
39 1r5m_A SIR4-interacting protei 100.0 1.9E-38 6.3E-43 329.0 39.5 343 48-480 25-424 (425)
40 3frx_A Guanine nucleotide-bind 100.0 1.8E-37 6E-42 306.6 41.2 288 102-433 8-317 (319)
41 4ery_A WD repeat-containing pr 100.0 2.1E-37 7.1E-42 306.0 41.7 286 59-432 13-311 (312)
42 3iz6_a 40S ribosomal protein R 100.0 7.2E-39 2.5E-43 325.0 30.1 304 49-433 47-375 (380)
43 2xzm_R RACK1; ribosome, transl 100.0 8.9E-38 3E-42 312.5 36.5 297 63-433 15-340 (343)
44 3v7d_B Cell division control p 100.0 8.7E-37 3E-41 319.9 45.0 333 53-432 105-462 (464)
45 4g56_B MGC81050 protein; prote 100.0 3.1E-38 1.1E-42 316.7 32.5 309 31-433 10-343 (357)
46 4aow_A Guanine nucleotide-bind 100.0 1.4E-36 4.8E-41 304.6 43.0 295 19-332 31-338 (340)
47 3zwl_B Eukaryotic translation 100.0 1.4E-36 4.8E-41 308.4 42.8 288 18-333 24-348 (369)
48 1sq9_A Antiviral protein SKI8; 100.0 1.6E-37 5.5E-42 318.7 36.1 294 13-332 3-396 (397)
49 1erj_A Transcriptional repress 100.0 4.1E-36 1.4E-40 306.2 46.0 307 49-433 41-389 (393)
50 4aow_A Guanine nucleotide-bind 100.0 1.1E-36 3.8E-41 305.3 40.6 313 43-434 9-338 (340)
51 4gqb_B Methylosome protein 50; 100.0 5.5E-37 1.9E-41 304.7 35.3 241 24-275 80-331 (344)
52 1gxr_A ESG1, transducin-like e 100.0 3.4E-36 1.2E-40 301.4 40.8 277 22-329 47-335 (337)
53 1k8k_C P40, ARP2/3 complex 41 100.0 9.1E-37 3.1E-41 310.1 36.4 301 21-332 3-362 (372)
54 3odt_A Protein DOA1; ubiquitin 100.0 4.9E-36 1.7E-40 296.8 39.7 283 17-334 9-299 (313)
55 3dm0_A Maltose-binding peripla 100.0 4.4E-36 1.5E-40 330.2 42.4 286 18-330 374-692 (694)
56 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.5E-35 1.9E-39 304.1 46.7 322 63-481 112-442 (445)
57 3v7d_B Cell division control p 100.0 2.5E-35 8.5E-40 308.9 44.2 314 19-367 114-459 (464)
58 2pm9_A Protein WEB1, protein t 100.0 3.3E-38 1.1E-42 326.0 21.9 356 72-530 13-414 (416)
59 3ei3_B DNA damage-binding prot 100.0 5.1E-36 1.7E-40 305.6 37.6 280 18-331 65-382 (383)
60 2j04_B YDR362CP, TAU91; beta p 100.0 3.3E-38 1.1E-42 329.0 21.5 338 24-433 131-517 (524)
61 2pm7_B Protein transport prote 100.0 2.6E-36 9E-41 295.0 33.7 246 20-275 3-285 (297)
62 1k32_A Tricorn protease; prote 100.0 4.6E-35 1.6E-39 336.1 49.3 504 25-625 13-639 (1045)
63 3gre_A Serine/threonine-protei 100.0 5.4E-37 1.8E-41 318.8 28.5 344 15-430 51-437 (437)
64 4h5i_A Guanine nucleotide-exch 100.0 1.8E-35 6.2E-40 297.4 38.4 280 27-332 15-344 (365)
65 3i2n_A WD repeat-containing pr 100.0 1.4E-36 4.9E-41 306.8 30.2 300 21-332 13-354 (357)
66 3k26_A Polycomb protein EED; W 100.0 2.6E-36 9E-41 306.0 31.6 292 20-330 12-365 (366)
67 3dwl_C Actin-related protein 2 100.0 1.1E-37 3.9E-42 317.2 21.0 295 21-329 6-377 (377)
68 2j04_A TAU60, YPL007P, hypothe 100.0 5.3E-38 1.8E-42 316.6 17.9 314 24-422 13-349 (588)
69 3vl1_A 26S proteasome regulato 100.0 7.1E-36 2.4E-40 308.8 32.6 322 74-433 59-419 (420)
70 4e54_B DNA damage-binding prot 100.0 3E-36 1E-40 312.0 28.6 288 21-334 114-433 (435)
71 3dm0_A Maltose-binding peripla 100.0 1.2E-34 4E-39 318.8 42.0 305 61-432 374-692 (694)
72 1p22_A F-BOX/WD-repeat protein 100.0 5.5E-35 1.9E-39 302.8 37.2 289 19-334 126-417 (435)
73 1sq9_A Antiviral protein SKI8; 100.0 7.3E-35 2.5E-39 298.9 37.3 247 62-333 9-324 (397)
74 3bg1_A Protein SEC13 homolog; 100.0 6.4E-36 2.2E-40 294.9 28.3 249 21-275 8-293 (316)
75 4aez_A CDC20, WD repeat-contai 100.0 1.4E-34 4.7E-39 296.4 36.8 280 24-333 89-382 (401)
76 4h5i_A Guanine nucleotide-exch 100.0 1.4E-35 4.9E-40 298.1 29.0 304 244-626 14-346 (365)
77 2j04_B YDR362CP, TAU91; beta p 100.0 3.1E-36 1.1E-40 314.1 23.9 317 34-372 169-518 (524)
78 3zwl_B Eukaryotic translation 100.0 1.4E-33 4.7E-38 286.3 42.6 301 63-433 26-346 (369)
79 1k32_A Tricorn protease; prote 100.0 3.2E-34 1.1E-38 329.1 42.5 479 17-572 43-639 (1045)
80 3odt_A Protein DOA1; ubiquitin 100.0 1.9E-33 6.5E-38 278.1 41.8 286 54-434 3-297 (313)
81 1k8k_C P40, ARP2/3 complex 41 100.0 3.6E-34 1.2E-38 290.9 37.5 323 64-433 3-361 (372)
82 4ggc_A P55CDC, cell division c 100.0 1.2E-33 4E-38 280.3 39.4 275 29-331 28-315 (318)
83 3jrp_A Fusion protein of prote 100.0 3.7E-34 1.3E-38 291.7 36.6 251 19-275 4-287 (379)
84 3gre_A Serine/threonine-protei 100.0 3.5E-35 1.2E-39 305.2 29.4 357 95-567 47-437 (437)
85 1yfq_A Cell cycle arrest prote 100.0 1.9E-34 6.5E-39 289.3 33.3 280 18-328 3-321 (342)
86 4a11_B DNA excision repair pro 100.0 4.7E-34 1.6E-38 294.1 36.8 331 18-371 35-405 (408)
87 4gga_A P55CDC, cell division c 100.0 1.3E-33 4.3E-38 291.0 38.9 276 29-332 108-396 (420)
88 3ei3_B DNA damage-binding prot 100.0 6.7E-34 2.3E-38 289.9 34.5 280 63-371 67-382 (383)
89 3dwl_C Actin-related protein 2 100.0 7.2E-35 2.5E-39 296.5 25.9 347 106-568 6-377 (377)
90 3f3f_A Nucleoporin SEH1; struc 100.0 2E-33 6.7E-38 282.8 35.9 250 19-275 4-337 (351)
91 3i2n_A WD repeat-containing pr 100.0 1.3E-33 4.5E-38 285.0 33.7 316 57-433 6-353 (357)
92 4e54_B DNA damage-binding prot 100.0 1.7E-34 5.9E-39 298.8 27.7 293 102-433 110-430 (435)
93 2j04_A TAU60, YPL007P, hypothe 100.0 1.9E-35 6.5E-40 298.1 19.0 315 70-518 14-349 (588)
94 3k26_A Polycomb protein EED; W 100.0 2.3E-33 7.9E-38 284.3 34.6 301 63-432 12-365 (366)
95 2pm7_B Protein transport prote 100.0 1.1E-33 3.9E-38 276.2 31.0 245 64-330 4-284 (297)
96 3dw8_B Serine/threonine-protei 100.0 1.1E-33 3.6E-38 295.2 31.9 321 24-370 26-445 (447)
97 3mmy_A MRNA export factor; mRN 100.0 6.1E-33 2.1E-37 281.4 33.0 285 16-329 29-344 (368)
98 4aez_A CDC20, WD repeat-contai 100.0 1.8E-32 6E-37 280.7 35.8 239 24-275 132-380 (401)
99 3bg1_A Protein SEC13 homolog; 100.0 1.5E-33 5.1E-38 278.0 25.0 252 61-330 5-292 (316)
100 4gga_A P55CDC, cell division c 100.0 3.7E-32 1.3E-36 280.0 36.1 243 22-275 143-395 (420)
101 1p22_A F-BOX/WD-repeat protein 100.0 2.4E-32 8.4E-37 282.9 34.8 284 66-434 130-415 (435)
102 4a11_B DNA excision repair pro 100.0 8E-33 2.7E-37 284.9 30.5 316 90-434 22-366 (408)
103 4ggc_A P55CDC, cell division c 100.0 4.5E-31 1.5E-35 261.7 36.4 278 206-572 28-317 (318)
104 3dw8_B Serine/threonine-protei 100.0 4.1E-32 1.4E-36 283.2 29.8 314 72-431 29-444 (447)
105 3jro_A Fusion protein of prote 100.0 8.3E-33 2.8E-37 305.3 23.2 250 20-275 3-285 (753)
106 2aq5_A Coronin-1A; WD40 repeat 100.0 6.8E-32 2.3E-36 276.7 28.1 284 27-335 35-346 (402)
107 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.1E-31 1.8E-35 274.2 35.0 281 27-330 5-390 (450)
108 3f3f_A Nucleoporin SEH1; struc 100.0 6.5E-31 2.2E-35 264.4 32.1 211 63-275 5-249 (351)
109 3jrp_A Fusion protein of prote 100.0 4.2E-31 1.4E-35 269.0 30.6 250 64-331 6-287 (379)
110 1yfq_A Cell cycle arrest prote 100.0 7.3E-31 2.5E-35 263.1 30.7 244 64-332 6-283 (342)
111 2aq5_A Coronin-1A; WD40 repeat 100.0 3.2E-31 1.1E-35 271.6 26.3 244 19-275 74-342 (402)
112 3mmy_A MRNA export factor; mRN 100.0 1.5E-30 5.3E-35 263.7 30.7 302 95-475 23-338 (368)
113 1l0q_A Surface layer protein; 100.0 3.4E-28 1.2E-32 248.5 45.3 262 39-334 3-278 (391)
114 2xyi_A Probable histone-bindin 100.0 1.5E-30 5.3E-35 268.5 28.0 243 21-275 123-410 (430)
115 3vu4_A KMHSV2; beta-propeller 100.0 1.2E-29 4E-34 254.3 32.6 287 21-331 14-336 (355)
116 3bws_A Protein LP49; two-domai 100.0 1.8E-28 6.1E-33 254.4 39.5 274 27-331 123-432 (433)
117 3vu4_A KMHSV2; beta-propeller 100.0 1E-28 3.5E-33 247.5 35.4 308 52-435 3-338 (355)
118 3lrv_A PRE-mRNA-splicing facto 100.0 5.7E-30 2E-34 256.0 26.0 264 31-329 41-331 (343)
119 2xyi_A Probable histone-bindin 100.0 2.1E-29 7.1E-34 260.1 30.7 257 60-333 119-412 (430)
120 3bws_A Protein LP49; two-domai 100.0 4.9E-28 1.7E-32 251.1 38.9 316 25-371 59-432 (433)
121 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.5E-28 8.7E-33 253.8 36.0 304 72-437 5-395 (450)
122 1l0q_A Surface layer protein; 100.0 2.3E-27 7.7E-32 242.4 41.0 261 83-373 4-277 (391)
123 3jro_A Fusion protein of prote 100.0 1.4E-29 4.8E-34 279.5 26.2 253 63-333 3-287 (753)
124 2w18_A PALB2, fancn, partner a 100.0 1.4E-28 4.9E-33 232.5 25.8 180 89-273 155-355 (356)
125 4gq1_A NUP37; propeller, trans 100.0 1.3E-28 4.5E-33 250.5 27.3 259 109-432 87-388 (393)
126 4gq1_A NUP37; propeller, trans 100.0 5.6E-29 1.9E-33 253.2 23.2 241 25-275 88-389 (393)
127 2w18_A PALB2, fancn, partner a 100.0 3.3E-27 1.1E-31 223.2 30.1 270 29-329 42-355 (356)
128 3lrv_A PRE-mRNA-splicing facto 100.0 4.3E-28 1.5E-32 242.3 23.8 259 81-370 48-332 (343)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.1E-27 1.4E-31 240.6 27.9 295 26-353 62-409 (415)
130 1nir_A Nitrite reductase; hemo 100.0 9.4E-26 3.2E-30 237.4 36.4 320 33-373 144-516 (543)
131 1nir_A Nitrite reductase; hemo 100.0 1.9E-25 6.6E-30 235.0 38.7 317 79-433 145-514 (543)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.2E-25 1.4E-29 225.7 32.2 292 72-415 63-409 (415)
133 2ecf_A Dipeptidyl peptidase IV 99.9 7.3E-25 2.5E-29 243.6 34.7 318 26-371 36-459 (741)
134 2ecf_A Dipeptidyl peptidase IV 99.9 4.4E-24 1.5E-28 237.3 31.5 317 72-431 37-457 (741)
135 1xfd_A DIP, dipeptidyl aminope 99.9 1.9E-24 6.7E-29 239.5 28.0 226 27-275 17-289 (723)
136 2z3z_A Dipeptidyl aminopeptida 99.9 2.5E-23 8.5E-28 229.8 34.8 341 74-547 28-452 (706)
137 2z3z_A Dipeptidyl aminopeptida 99.9 1.4E-23 5E-28 231.7 31.0 313 28-371 27-435 (706)
138 3u4y_A Uncharacterized protein 99.9 2.5E-22 8.5E-27 199.8 33.9 282 32-338 3-311 (331)
139 1xfd_A DIP, dipeptidyl aminope 99.9 1.1E-23 3.6E-28 233.6 25.4 345 113-518 18-428 (723)
140 3vgz_A Uncharacterized protein 99.9 2.3E-21 7.8E-26 194.8 36.4 269 26-322 40-335 (353)
141 1ri6_A Putative isomerase YBHE 99.9 2.4E-21 8.3E-26 193.8 35.5 294 39-353 5-334 (343)
142 3u4y_A Uncharacterized protein 99.9 5.9E-21 2E-25 189.8 35.5 267 81-372 10-305 (331)
143 1ri6_A Putative isomerase YBHE 99.9 7.2E-21 2.5E-25 190.3 33.2 246 24-275 35-308 (343)
144 2ojh_A Uncharacterized protein 99.9 7.5E-22 2.6E-26 192.9 20.7 233 19-266 34-293 (297)
145 1pby_B Quinohemoprotein amine 99.9 2.5E-20 8.5E-25 185.9 31.7 264 82-373 2-312 (337)
146 2ojh_A Uncharacterized protein 99.9 3.9E-21 1.3E-25 187.8 24.5 248 44-322 18-293 (297)
147 3vgz_A Uncharacterized protein 99.9 5.6E-20 1.9E-24 184.6 32.9 260 72-359 41-331 (353)
148 1z68_A Fibroblast activation p 99.9 8.1E-22 2.8E-26 218.1 21.2 316 31-373 20-445 (719)
149 1pby_B Quinohemoprotein amine 99.9 1.5E-20 5E-25 187.5 28.3 262 39-333 2-312 (337)
150 3hfq_A Uncharacterized protein 99.9 1.1E-19 3.9E-24 181.7 33.0 247 24-274 37-316 (347)
151 1z68_A Fibroblast activation p 99.9 4.4E-21 1.5E-25 212.2 23.8 188 76-272 20-284 (719)
152 3hfq_A Uncharacterized protein 99.9 4.2E-19 1.4E-23 177.6 35.8 277 40-336 4-324 (347)
153 3scy_A Hypothetical bacterial 99.9 1.4E-18 4.8E-23 174.8 39.2 304 222-601 25-360 (361)
154 3o4h_A Acylamino-acid-releasin 99.9 1.2E-20 4E-25 203.1 24.4 266 26-331 21-315 (582)
155 1jmx_B Amine dehydrogenase; ox 99.9 6.2E-20 2.1E-24 184.0 27.4 280 31-333 4-327 (349)
156 2oit_A Nucleoporin 214KDA; NH2 99.9 1.4E-19 4.7E-24 185.2 30.1 251 18-274 24-332 (434)
157 4a5s_A Dipeptidyl peptidase 4 99.9 6.5E-20 2.2E-24 202.5 29.4 322 27-372 17-450 (740)
158 3scy_A Hypothetical bacterial 99.9 1.2E-18 4.1E-23 175.3 34.3 245 25-274 48-336 (361)
159 3pe7_A Oligogalacturonate lyas 99.9 1.9E-19 6.5E-24 183.3 27.4 290 94-433 13-382 (388)
160 3pe7_A Oligogalacturonate lyas 99.8 3.8E-19 1.3E-23 181.1 24.2 284 17-329 21-380 (388)
161 3o4h_A Acylamino-acid-releasin 99.8 5.2E-19 1.8E-23 190.2 26.2 264 111-483 21-315 (582)
162 1jof_A Carboxy-CIS,CIS-muconat 99.8 8E-19 2.8E-23 176.4 25.3 248 25-275 38-341 (365)
163 2oit_A Nucleoporin 214KDA; NH2 99.8 7.8E-18 2.7E-22 172.3 29.9 251 91-370 23-332 (434)
164 4a5s_A Dipeptidyl peptidase 4 99.8 3.9E-18 1.3E-22 188.2 29.2 306 72-420 17-432 (740)
165 1jmx_B Amine dehydrogenase; ox 99.8 1.1E-17 3.6E-22 167.7 27.5 273 77-373 5-327 (349)
166 3azo_A Aminopeptidase; POP fam 99.8 1.2E-17 4.3E-22 182.7 29.2 286 21-337 18-375 (662)
167 3fvz_A Peptidyl-glycine alpha- 99.8 3.7E-17 1.3E-21 161.5 29.5 239 26-275 23-322 (329)
168 1q7f_A NHL, brain tumor CG1071 99.8 5.9E-16 2E-20 149.9 33.3 238 24-275 27-280 (286)
169 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.6E-16 5.3E-21 159.7 30.1 274 40-333 4-343 (365)
170 2oiz_A Aromatic amine dehydrog 99.8 2.8E-16 9.7E-21 156.7 30.5 283 89-416 29-360 (361)
171 3c5m_A Oligogalacturonate lyas 99.8 3.2E-17 1.1E-21 167.4 22.4 292 94-437 13-386 (396)
172 3azo_A Aminopeptidase; POP fam 99.8 5.1E-16 1.7E-20 169.9 31.0 279 64-373 18-371 (662)
173 2oiz_A Aromatic amine dehydrog 99.7 2.4E-15 8.1E-20 150.1 32.2 289 36-354 13-360 (361)
174 3c5m_A Oligogalacturonate lyas 99.7 3.3E-17 1.1E-21 167.2 19.2 231 29-275 38-329 (396)
175 4a2l_A BT_4663, two-component 99.7 7.3E-12 2.5E-16 139.4 62.0 526 26-622 87-658 (795)
176 1qks_A Cytochrome CD1 nitrite 99.7 8E-14 2.7E-18 145.9 42.3 318 82-433 168-538 (567)
177 3e5z_A Putative gluconolactona 99.7 1.8E-15 6E-20 147.3 27.6 237 19-275 20-286 (296)
178 4a2l_A BT_4663, two-component 99.7 1.4E-11 4.8E-16 137.1 60.7 516 26-622 42-613 (795)
179 2dg1_A DRP35, lactonase; beta 99.7 8E-15 2.7E-19 145.5 30.0 263 27-321 6-300 (333)
180 2z2n_A Virginiamycin B lyase; 99.7 2.8E-13 9.6E-18 132.0 40.2 278 23-331 11-295 (299)
181 2dg1_A DRP35, lactonase; beta 99.7 3.3E-14 1.1E-18 141.0 33.6 243 17-266 35-301 (333)
182 2gop_A Trilobed protease; beta 99.7 1.2E-14 4.3E-19 145.0 30.6 259 27-338 15-337 (347)
183 1qks_A Cytochrome CD1 nitrite 99.7 1.9E-13 6.4E-18 143.1 40.0 318 35-373 164-540 (567)
184 3fvz_A Peptidyl-glycine alpha- 99.7 1.4E-14 4.9E-19 142.9 28.9 239 72-331 24-322 (329)
185 3v9f_A Two-component system se 99.7 1.4E-10 4.8E-15 128.8 63.3 539 27-622 66-655 (781)
186 1q7f_A NHL, brain tumor CG1071 99.7 1.8E-13 6.3E-18 132.2 34.3 231 72-331 30-280 (286)
187 2xdw_A Prolyl endopeptidase; a 99.7 6.4E-15 2.2E-19 161.9 26.8 241 24-275 122-414 (710)
188 3dsm_A Uncharacterized protein 99.7 4.5E-14 1.5E-18 139.0 29.7 266 46-338 15-309 (328)
189 2gop_A Trilobed protease; beta 99.7 3.3E-14 1.1E-18 142.0 27.5 253 73-370 16-330 (347)
190 3e5z_A Putative gluconolactona 99.7 1.4E-13 4.8E-18 133.8 31.0 247 101-373 17-288 (296)
191 2z2n_A Virginiamycin B lyase; 99.6 4.6E-12 1.6E-16 123.3 39.8 277 65-372 10-296 (299)
192 2bkl_A Prolyl endopeptidase; m 99.6 4E-15 1.4E-19 162.9 19.3 238 24-275 118-397 (695)
193 3v9f_A Two-component system se 99.6 1.4E-09 4.9E-14 120.7 63.8 545 15-622 6-610 (781)
194 1rwi_B Serine/threonine-protei 99.6 5.2E-14 1.8E-18 134.9 24.5 235 28-275 25-264 (270)
195 3no2_A Uncharacterized protein 99.6 1.9E-13 6.4E-18 130.2 26.8 212 37-263 4-231 (276)
196 2xdw_A Prolyl endopeptidase; a 99.6 2.8E-13 9.5E-18 148.9 31.8 270 36-333 81-416 (710)
197 2qc5_A Streptogramin B lactona 99.6 8.3E-12 2.8E-16 121.5 37.7 275 24-329 17-298 (300)
198 3no2_A Uncharacterized protein 99.6 1.5E-12 5E-17 124.0 30.6 186 81-275 5-195 (276)
199 3sjl_D Methylamine dehydrogena 99.6 3.4E-12 1.2E-16 124.6 31.5 292 31-352 37-384 (386)
200 3sjl_D Methylamine dehydrogena 99.6 2.5E-12 8.6E-17 125.6 30.3 296 117-463 38-384 (386)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 9.4E-13 3.2E-17 129.2 27.1 241 24-275 15-299 (314)
202 2bkl_A Prolyl endopeptidase; m 99.6 3.4E-13 1.2E-17 147.7 25.7 274 35-337 76-403 (695)
203 3dsm_A Uncharacterized protein 99.6 2.5E-12 8.5E-17 126.5 28.4 258 89-373 15-303 (328)
204 1rwi_B Serine/threonine-protei 99.5 1.4E-12 4.9E-17 124.8 24.3 235 73-333 25-266 (270)
205 2mad_H Methylamine dehydrogena 99.5 6.7E-11 2.3E-15 117.7 35.4 263 81-373 32-352 (373)
206 2qc5_A Streptogramin B lactona 99.5 1.9E-10 6.6E-15 111.7 38.3 269 72-369 20-298 (300)
207 1yr2_A Prolyl oligopeptidase; 99.5 7.5E-13 2.6E-17 146.0 23.0 237 25-275 161-441 (741)
208 3q7m_A Lipoprotein YFGL, BAMB; 99.5 2E-10 6.7E-15 115.7 37.8 307 37-368 52-375 (376)
209 2mad_H Methylamine dehydrogena 99.5 4.9E-10 1.7E-14 111.5 39.2 274 33-337 27-356 (373)
210 3g4e_A Regucalcin; six bladed 99.5 9.5E-11 3.3E-15 113.5 33.3 230 21-264 7-261 (297)
211 3c75_H MADH, methylamine dehyd 99.5 2.8E-11 9.5E-16 120.7 27.2 275 81-433 84-402 (426)
212 1yr2_A Prolyl oligopeptidase; 99.5 1.6E-11 5.5E-16 135.4 28.1 275 35-338 115-448 (741)
213 3hrp_A Uncharacterized protein 99.5 3.6E-11 1.2E-15 121.6 28.3 239 27-273 131-408 (409)
214 2ghs_A AGR_C_1268P; regucalcin 99.4 1.4E-10 4.7E-15 113.9 30.7 228 22-265 44-292 (326)
215 3q7m_A Lipoprotein YFGL, BAMB; 99.4 6.2E-10 2.1E-14 112.1 36.0 300 80-430 52-375 (376)
216 1xip_A Nucleoporin NUP159; bet 99.4 5.9E-12 2E-16 123.6 20.4 178 27-219 38-229 (388)
217 3dr2_A Exported gluconolactona 99.4 4.6E-11 1.6E-15 116.3 26.0 230 20-266 38-298 (305)
218 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 3.4E-10 1.2E-14 110.9 31.7 232 72-332 18-300 (314)
219 3hrp_A Uncharacterized protein 99.4 2.5E-10 8.7E-15 115.3 31.2 233 112-369 131-408 (409)
220 3g4e_A Regucalcin; six bladed 99.4 1.1E-09 3.9E-14 105.8 34.3 213 72-311 13-249 (297)
221 1yiq_A Quinohemoprotein alcoho 99.4 1.1E-09 3.6E-14 118.5 35.2 302 38-358 70-534 (689)
222 3iuj_A Prolyl endopeptidase; h 99.4 2.3E-11 7.9E-16 132.7 22.5 237 23-275 125-405 (693)
223 3c75_H MADH, methylamine dehyd 99.4 1.9E-10 6.6E-15 114.6 26.9 286 36-352 82-423 (426)
224 3hxj_A Pyrrolo-quinoline quino 99.4 1.2E-11 4.3E-16 122.2 18.0 296 78-433 26-324 (330)
225 3hxj_A Pyrrolo-quinoline quino 99.4 2.2E-11 7.5E-16 120.4 19.3 298 31-371 24-324 (330)
226 3dr2_A Exported gluconolactona 99.4 4.9E-10 1.7E-14 109.0 27.4 239 103-368 36-303 (305)
227 1xip_A Nucleoporin NUP159; bet 99.4 2.1E-11 7.3E-16 119.7 17.5 170 72-262 38-231 (388)
228 1kb0_A Quinohemoprotein alcoho 99.3 1.5E-09 5.3E-14 117.0 32.0 302 38-358 77-536 (677)
229 2ghs_A AGR_C_1268P; regucalcin 99.3 1.6E-08 5.4E-13 99.1 35.1 209 72-311 49-279 (326)
230 1mda_H Methylamine dehydrogena 99.3 1.4E-10 4.7E-15 113.8 18.0 256 92-433 47-346 (368)
231 1yiq_A Quinohemoprotein alcoho 99.2 5.1E-09 1.7E-13 113.2 29.7 310 80-420 69-534 (689)
232 2qe8_A Uncharacterized protein 99.2 1.2E-09 4E-14 108.2 22.7 231 27-271 17-317 (343)
233 1kb0_A Quinohemoprotein alcoho 99.2 8.5E-09 2.9E-13 111.2 29.7 237 37-275 127-507 (677)
234 3iuj_A Prolyl endopeptidase; h 99.2 1.8E-09 6.2E-14 117.7 24.3 238 72-338 129-412 (693)
235 2hz6_A Endoplasmic reticulum t 99.2 1.4E-11 4.8E-16 122.9 5.3 199 37-257 8-216 (369)
236 2qe8_A Uncharacterized protein 99.2 6.9E-09 2.4E-13 102.6 24.6 239 112-360 17-309 (343)
237 2iwa_A Glutamine cyclotransfer 99.2 4.5E-08 1.5E-12 90.3 27.9 213 14-233 7-237 (266)
238 2ece_A 462AA long hypothetical 99.2 1.2E-07 4.1E-12 93.1 32.0 224 165-422 93-399 (462)
239 1kv9_A Type II quinohemoprotei 99.1 1E-07 3.6E-12 102.7 34.8 300 38-358 66-517 (668)
240 4a0p_A LRP6, LRP-6, low-densit 99.1 2.1E-05 7.2E-10 83.5 59.7 510 39-622 7-548 (628)
241 3s94_A LRP-6, low-density lipo 99.1 2.3E-05 7.8E-10 83.1 56.2 403 25-481 38-508 (619)
242 3s94_A LRP-6, low-density lipo 99.1 2.8E-05 9.6E-10 82.5 52.9 469 40-572 11-512 (619)
243 2ece_A 462AA long hypothetical 99.1 6.5E-08 2.2E-12 95.0 26.7 229 34-263 89-399 (462)
244 1npe_A Nidogen, entactin; glyc 99.1 8.8E-07 3E-11 83.9 33.5 245 82-354 2-263 (267)
245 1mda_H Methylamine dehydrogena 99.1 1.4E-08 4.7E-13 99.6 21.3 260 49-350 47-365 (368)
246 2ad6_A Methanol dehydrogenase 99.1 4.8E-07 1.6E-11 95.3 34.2 300 38-359 62-524 (571)
247 2hz6_A Endoplasmic reticulum t 99.0 8.3E-11 2.8E-15 117.3 4.0 178 80-275 8-192 (369)
248 3ott_A Two-component system se 99.0 8.9E-05 3E-09 81.8 63.5 519 26-622 62-625 (758)
249 1fwx_A Nitrous oxide reductase 99.0 1.4E-08 4.8E-13 103.4 18.0 215 36-264 99-407 (595)
250 1npe_A Nidogen, entactin; glyc 99.0 1.1E-06 3.6E-11 83.3 30.0 217 27-257 36-263 (267)
251 3nol_A Glutamine cyclotransfer 99.0 1.9E-07 6.5E-12 84.8 22.7 199 15-221 30-243 (262)
252 3nok_A Glutaminyl cyclase; bet 98.9 3.6E-07 1.2E-11 82.9 23.5 188 67-264 50-254 (268)
253 3nol_A Glutamine cyclotransfer 98.9 7.3E-07 2.5E-11 81.0 25.4 192 64-265 36-245 (262)
254 3ott_A Two-component system se 98.9 0.00017 5.6E-09 79.7 50.9 487 72-623 22-545 (758)
255 1flg_A Protein (quinoprotein e 98.9 2.3E-06 8E-11 90.2 33.1 301 38-358 68-545 (582)
256 3nok_A Glutaminyl cyclase; bet 98.9 3.4E-07 1.2E-11 83.0 22.6 186 27-221 55-253 (268)
257 2iwa_A Glutamine cyclotransfer 98.9 8.7E-07 3E-11 81.7 25.8 194 73-275 22-237 (266)
258 1fwx_A Nitrous oxide reductase 98.9 5E-07 1.7E-11 92.2 25.7 261 84-359 18-405 (595)
259 2fp8_A Strictosidine synthase; 98.9 1.1E-06 3.7E-11 86.0 27.6 235 28-275 20-313 (322)
260 3ei3_A DNA damage-binding prot 98.9 0.00028 9.7E-09 80.1 54.3 393 27-479 514-995 (1158)
261 4a0p_A LRP6, LRP-6, low-densit 98.9 0.00016 5.6E-09 76.7 60.2 483 27-574 37-553 (628)
262 1w6s_A Methanol dehydrogenase 98.9 4.2E-06 1.5E-10 87.9 32.5 299 38-358 62-532 (599)
263 1kv9_A Type II quinohemoprotei 98.9 1.2E-06 4E-11 94.5 28.8 237 38-275 117-488 (668)
264 3mbr_X Glutamine cyclotransfer 98.8 7.9E-06 2.7E-10 73.6 27.8 191 64-264 14-223 (243)
265 2ad6_A Methanol dehydrogenase 98.8 5E-06 1.7E-10 87.6 31.0 192 80-275 61-335 (571)
266 3mbr_X Glutamine cyclotransfer 98.8 3.9E-06 1.4E-10 75.6 25.2 188 27-221 21-222 (243)
267 1w6s_A Methanol dehydrogenase 98.8 7.3E-06 2.5E-10 86.2 31.0 193 81-275 62-342 (599)
268 2xbg_A YCF48-like protein; pho 98.8 3.7E-05 1.3E-09 74.9 33.0 275 25-329 34-320 (327)
269 2fp8_A Strictosidine synthase; 98.7 9.6E-06 3.3E-10 79.1 27.9 239 112-371 19-313 (322)
270 2p4o_A Hypothetical protein; p 98.7 9.9E-06 3.4E-10 78.3 27.1 224 27-266 32-279 (306)
271 3qqz_A Putative uncharacterize 98.7 2.3E-05 7.9E-10 71.8 26.7 204 149-369 20-251 (255)
272 1flg_A Protein (quinoprotein e 98.7 4.2E-05 1.4E-09 80.6 31.9 193 80-275 67-355 (582)
273 3ei3_A DNA damage-binding prot 98.6 0.0019 6.3E-08 73.5 60.3 479 91-619 492-1058(1158)
274 3qqz_A Putative uncharacterize 98.6 6.2E-05 2.1E-09 69.0 27.7 218 10-231 9-251 (255)
275 3v65_B Low-density lipoprotein 98.5 9.5E-05 3.2E-09 73.8 29.4 233 27-275 77-318 (386)
276 3v64_C Agrin; beta propeller, 98.5 0.00016 5.5E-09 71.0 30.0 235 25-275 32-275 (349)
277 2p4o_A Hypothetical protein; p 98.5 0.00019 6.3E-09 69.3 29.9 231 102-359 23-275 (306)
278 1ijq_A LDL receptor, low-densi 98.5 0.00025 8.6E-09 68.5 30.6 206 26-241 29-246 (316)
279 3v64_C Agrin; beta propeller, 98.5 0.0002 6.7E-09 70.3 29.6 202 27-241 73-283 (349)
280 3p5b_L Low density lipoprotein 98.5 0.00038 1.3E-08 69.7 31.3 219 25-252 110-339 (400)
281 3tc9_A Hypothetical hydrolase; 98.4 0.00011 3.8E-09 74.4 26.9 151 113-275 138-301 (430)
282 1k3i_A Galactose oxidase precu 98.4 3.8E-05 1.3E-09 83.0 24.2 273 31-320 190-530 (656)
283 4hw6_A Hypothetical protein, I 98.4 0.00017 5.8E-09 73.0 27.4 239 28-274 140-432 (433)
284 3sov_A LRP-6, low-density lipo 98.4 0.00016 5.3E-09 69.8 25.9 203 28-241 36-246 (318)
285 3v65_B Low-density lipoprotein 98.4 0.00014 4.6E-09 72.6 26.3 205 26-242 115-327 (386)
286 2xe4_A Oligopeptidase B; hydro 98.4 1.6E-05 5.4E-10 87.2 20.7 192 28-231 175-398 (751)
287 3tc9_A Hypothetical hydrolase; 98.4 0.00032 1.1E-08 71.0 28.0 239 28-274 138-429 (430)
288 1k3i_A Galactose oxidase precu 98.3 4E-05 1.4E-09 82.8 22.2 260 81-360 198-529 (656)
289 2xbg_A YCF48-like protein; pho 98.3 0.00073 2.5E-08 65.6 28.8 234 26-273 79-320 (327)
290 1ijq_A LDL receptor, low-densi 98.3 0.0028 9.4E-08 61.2 34.7 217 91-332 10-239 (316)
291 4hw6_A Hypothetical protein, I 98.3 0.00027 9.2E-09 71.5 25.7 234 113-370 140-432 (433)
292 3p5b_L Low density lipoprotein 98.2 0.0022 7.5E-08 64.1 30.9 222 39-275 84-320 (400)
293 2xzh_A Clathrin heavy chain 1; 98.2 0.0032 1.1E-07 58.5 29.2 233 31-275 71-332 (365)
294 2xe4_A Oligopeptidase B; hydro 98.2 0.00014 4.7E-09 79.8 23.7 190 113-329 175-398 (751)
295 3sov_A LRP-6, low-density lipo 98.2 0.0014 4.9E-08 63.0 27.6 222 40-275 6-238 (318)
296 3m0c_C LDL receptor, low-densi 98.1 0.0021 7.1E-08 69.9 29.9 207 26-241 423-640 (791)
297 3kya_A Putative phosphatase; s 98.1 0.0041 1.4E-07 62.9 28.8 243 28-275 140-475 (496)
298 1bpo_A Protein (clathrin); cla 98.1 0.01 3.5E-07 57.6 29.5 233 31-275 70-331 (494)
299 3m0c_C LDL receptor, low-densi 98.0 0.0082 2.8E-07 65.2 31.3 232 27-275 385-632 (791)
300 1n7d_A LDL receptor, low-densi 97.9 2.3E-05 7.8E-10 84.6 9.7 216 27-252 406-633 (699)
301 2p9w_A MAL S 1 allergenic prot 97.9 0.0023 7.9E-08 60.3 21.1 162 111-275 12-215 (334)
302 3kya_A Putative phosphatase; s 97.9 0.0058 2E-07 61.8 25.5 240 113-373 140-477 (496)
303 3amr_A 3-phytase; beta-propell 97.9 0.0054 1.8E-07 58.4 23.7 180 82-275 41-263 (355)
304 2ism_A Putative oxidoreductase 97.8 0.0082 2.8E-07 58.8 24.4 232 112-359 31-332 (352)
305 3sre_A PON1, serum paraoxonase 97.8 0.0097 3.3E-07 57.5 24.0 199 333-560 41-287 (355)
306 2vpj_A Kelch-like protein 12; 97.7 0.0074 2.5E-07 57.8 23.0 226 37-275 14-278 (301)
307 2vpj_A Kelch-like protein 12; 97.7 0.0054 1.8E-07 58.7 21.9 222 91-337 31-284 (301)
308 3sre_A PON1, serum paraoxonase 97.7 0.0099 3.4E-07 57.5 23.0 215 16-241 39-308 (355)
309 3amr_A 3-phytase; beta-propell 97.7 0.012 4.2E-07 55.9 23.0 198 31-241 30-272 (355)
310 3ii7_A Kelch-like protein 7; p 97.6 0.023 8E-07 54.4 24.9 224 39-275 13-272 (306)
311 2ism_A Putative oxidoreductase 97.6 0.059 2E-06 52.6 29.8 246 204-471 31-333 (352)
312 3ii7_A Kelch-like protein 7; p 97.6 0.033 1.1E-06 53.3 25.1 230 83-337 14-278 (306)
313 2p9w_A MAL S 1 allergenic prot 97.6 0.012 4.2E-07 55.4 20.8 161 72-234 13-216 (334)
314 2xzh_A Clathrin heavy chain 1; 97.6 0.052 1.8E-06 50.6 30.3 211 132-373 48-292 (365)
315 2xn4_A Kelch-like protein 2; s 97.5 0.02 6.8E-07 54.7 23.1 222 91-338 30-283 (302)
316 2xn4_A Kelch-like protein 2; s 97.4 0.032 1.1E-06 53.2 22.6 225 38-275 16-276 (302)
317 4asc_A Kelch repeat and BTB do 97.4 0.035 1.2E-06 53.3 22.4 227 84-337 8-283 (315)
318 2g8s_A Glucose/sorbosone dehyd 97.4 0.12 4.2E-06 50.3 27.5 151 112-264 18-216 (353)
319 1n7d_A LDL receptor, low-densi 97.4 0.00078 2.7E-08 72.7 11.4 217 131-373 384-616 (699)
320 1zgk_A Kelch-like ECH-associat 97.3 0.031 1.1E-06 53.6 20.9 231 81-337 25-293 (308)
321 1zgk_A Kelch-like ECH-associat 97.3 0.032 1.1E-06 53.4 20.5 228 34-275 21-287 (308)
322 1bpo_A Protein (clathrin); cla 97.2 0.18 6.1E-06 49.1 31.1 211 132-373 47-291 (494)
323 4asc_A Kelch repeat and BTB do 97.2 0.078 2.7E-06 50.9 22.5 208 126-359 8-250 (315)
324 3a9g_A Putative uncharacterize 97.1 0.23 7.8E-06 48.4 30.6 245 203-471 28-330 (354)
325 3pbp_A Nucleoporin NUP82; beta 97.1 0.012 4E-07 57.2 14.9 150 410-566 27-208 (452)
326 2woz_A Kelch repeat and BTB do 97.0 0.13 4.4E-06 49.4 22.5 221 92-337 25-293 (318)
327 3pbp_A Nucleoporin NUP82; beta 97.0 0.11 3.7E-06 50.6 20.9 150 118-271 27-208 (452)
328 2g8s_A Glucose/sorbosone dehyd 97.0 0.25 8.5E-06 48.2 24.1 230 27-263 18-341 (353)
329 1tl2_A L10, protein (tachylect 97.0 0.0064 2.2E-07 53.1 10.6 147 454-617 42-204 (236)
330 2woz_A Kelch repeat and BTB do 96.8 0.23 7.7E-06 47.7 22.3 221 40-275 18-287 (318)
331 3das_A Putative oxidoreductase 96.8 0.37 1.3E-05 46.2 30.0 248 106-359 26-325 (347)
332 1xi4_A Clathrin heavy chain; a 96.8 0.045 1.5E-06 61.7 18.1 233 31-275 70-331 (1630)
333 3das_A Putative oxidoreductase 96.8 0.41 1.4E-05 46.0 28.2 233 16-263 21-326 (347)
334 2be1_A Serine/threonine-protei 96.6 0.054 1.9E-06 51.8 15.5 196 39-238 11-236 (339)
335 3a9g_A Putative uncharacterize 96.5 0.68 2.3E-05 45.0 30.2 232 302-558 28-330 (354)
336 1tl2_A L10, protein (tachylect 96.4 0.057 2E-06 47.2 12.8 147 112-275 41-208 (236)
337 1cru_A Protein (soluble quinop 96.4 0.35 1.2E-05 48.9 20.9 105 111-218 26-158 (454)
338 2uvk_A YJHT; unknown function, 96.2 0.37 1.3E-05 47.1 19.4 229 37-275 19-342 (357)
339 2uvk_A YJHT; unknown function, 96.1 0.26 8.9E-06 48.2 18.0 233 81-336 20-347 (357)
340 3s25_A Hypothetical 7-bladed b 95.9 1.2 4E-05 42.1 25.1 201 306-558 58-280 (302)
341 1xi4_A Clathrin heavy chain; a 95.7 0.98 3.4E-05 51.4 21.2 254 320-622 46-330 (1630)
342 2zwa_A Leucine carboxyl methyl 95.5 0.7 2.4E-05 49.8 19.5 195 36-237 396-639 (695)
343 2be1_A Serine/threonine-protei 95.4 0.024 8.3E-07 54.2 6.7 191 81-275 10-231 (339)
344 3s25_A Hypothetical 7-bladed b 95.4 1.9 6.3E-05 40.7 26.3 207 35-275 22-255 (302)
345 2zwa_A Leucine carboxyl methyl 95.1 1.7 6E-05 46.7 21.0 203 121-337 396-641 (695)
346 2wg3_C Hedgehog-interacting pr 94.7 4.1 0.00014 41.0 24.2 30 341-370 13-44 (463)
347 3qhy_B Beta-lactamase inhibito 92.5 2.2 7.7E-05 39.7 13.7 221 28-275 25-246 (282)
348 3sbq_A Nitrous-oxide reductase 92.4 10 0.00036 38.4 21.7 216 37-264 141-454 (638)
349 4hvt_A Ritya.17583.B, post-pro 92.3 14 0.00047 39.6 23.8 234 29-273 131-428 (711)
350 1cru_A Protein (soluble quinop 92.2 11 0.00036 38.0 31.2 61 203-263 26-98 (454)
351 3qhy_B Beta-lactamase inhibito 91.4 3.9 0.00013 38.0 14.0 223 72-331 24-246 (282)
352 3b7f_A Glycosyl hydrolase, BNR 88.7 19 0.00065 35.2 28.7 218 39-263 23-297 (394)
353 3sbq_A Nitrous-oxide reductase 87.1 28 0.00097 35.4 21.4 230 41-275 73-408 (638)
354 3uc1_A DNA gyrase subunit A; D 81.5 36 0.0012 32.1 19.6 164 455-623 44-228 (327)
355 3q6k_A 43.2 kDa salivary prote 67.7 91 0.0031 30.1 23.3 166 92-262 124-341 (381)
356 3zwu_A Alkaline phosphatase PH 65.7 20 0.00069 37.1 8.8 57 457-517 480-548 (592)
357 3q6k_A 43.2 kDa salivary prote 65.4 1E+02 0.0035 29.8 22.9 147 177-331 124-306 (381)
358 3l6v_A GYRA, DNA gyrase subuni 64.5 1E+02 0.0035 29.6 21.1 158 458-622 51-264 (370)
359 4gq2_M Nucleoporin NUP120; bet 62.2 69 0.0023 35.7 13.0 40 156-195 236-276 (950)
360 1zi0_A DNA gyrase subunit A; b 58.9 1.2E+02 0.004 28.3 21.0 158 458-622 47-225 (307)
361 4gq2_M Nucleoporin NUP120; bet 58.3 80 0.0027 35.2 12.7 39 113-151 237-275 (950)
362 4a9v_A PHOX; hydrolase, beta-p 57.9 35 0.0012 34.9 8.7 60 204-263 476-549 (592)
363 3b7f_A Glycosyl hydrolase, BNR 54.8 1.6E+02 0.0053 28.5 29.8 97 169-271 24-143 (394)
364 4a9v_A PHOX; hydrolase, beta-p 53.4 52 0.0018 33.7 9.1 61 454-518 477-549 (592)
365 1suu_A DNA gyrase subunit A; t 50.0 1.6E+02 0.0056 27.4 22.8 231 36-275 6-283 (312)
366 3f7f_A Nucleoporin NUP120; nuc 49.9 24 0.00082 37.3 6.2 37 73-109 223-259 (729)
367 3no0_A DNA gyrase subunit A; D 48.8 1.6E+02 0.0054 26.9 17.3 150 463-622 79-245 (276)
368 1zi0_A DNA gyrase subunit A; b 48.1 1.7E+02 0.0059 27.1 25.4 229 36-275 1-277 (307)
369 3zwu_A Alkaline phosphatase PH 46.6 50 0.0017 34.2 8.0 58 205-262 477-548 (592)
370 1wp5_A Topoisomerase IV; broke 44.9 2E+02 0.0069 26.9 18.5 160 457-623 43-225 (323)
371 4fhn_B Nucleoporin NUP120; pro 44.5 63 0.0022 37.0 9.3 39 157-195 239-278 (1139)
372 3no0_A DNA gyrase subunit A; D 42.8 2E+02 0.0067 26.2 22.6 194 72-275 24-246 (276)
373 2wg3_C Hedgehog-interacting pr 40.9 2.9E+02 0.0098 27.6 31.0 53 203-255 13-79 (463)
374 3uc1_A DNA gyrase subunit A; D 39.8 2.4E+02 0.0083 26.4 18.8 112 26-141 94-227 (327)
375 4fhn_B Nucleoporin NUP120; pro 33.7 1.4E+02 0.0047 34.2 9.8 30 246-275 239-268 (1139)
376 4h3o_A Lectin; cadmium, plant 29.5 1.7E+02 0.006 21.7 10.9 26 345-371 53-78 (105)
377 3f7f_A Nucleoporin NUP120; nuc 28.9 85 0.0029 33.2 6.3 37 157-195 223-260 (729)
378 3mez_A Mannose-specific lectin 28.4 1.9E+02 0.0065 21.8 7.7 25 408-432 53-77 (111)
379 3kci_A Probable E3 ubiquitin-p 27.2 4.2E+02 0.014 25.4 32.0 280 81-371 10-345 (389)
380 1sqj_A OXG-RCBH, oligoxylogluc 26.6 6.3E+02 0.022 27.2 23.5 235 26-270 14-328 (789)
381 2zux_A YESW protein; beta-prop 23.8 6E+02 0.021 26.0 27.2 228 25-275 177-479 (591)
382 3mez_A Mannose-specific lectin 23.3 2.4E+02 0.0082 21.2 9.2 26 345-370 52-77 (111)
383 1q47_A Semaphorin 3A; beta pro 22.1 2.4E+02 0.0082 28.4 8.0 58 465-525 422-487 (495)
384 1wp5_A Topoisomerase IV; broke 21.8 4.9E+02 0.017 24.2 24.1 230 36-275 3-277 (323)
385 3mez_B Mannose-specific lectin 21.7 2.6E+02 0.0089 21.0 9.2 82 166-272 23-105 (113)
No 1
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=8.5e-71 Score=595.91 Aligned_cols=524 Identities=16% Similarity=0.249 Sum_probs=453.4
Q ss_pred eeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 15 GVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 15 ~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
.+++.+.+.||.+.|+|++|||||++||+|+.|+.|+|||. +++.+. .+.+|. ..|.+++|+ +++|++++.|++
T Consensus 5 ~~~e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~-~l~gh~--~~V~~l~fspdg~~las~~~d~~ 80 (577)
T 2ymu_A 5 GVKERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQ-TLTGHS--SSVWGVAFSPDGQTIASASDDKT 80 (577)
T ss_dssp CCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEE-EEECCS--SCEEEEEECTTSSEEEEEETTSC
T ss_pred CcEEeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEE-EEeCCC--CCEEEEEECCCCCEEEEEeCCCE
Confidence 34556679999999999999999999999999999999995 566665 899999 999999999 899999999999
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEE-------------------------
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLY------------------------- 147 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~------------------------- 147 (708)
|++||+ +++++..+.+|.+.|.+++|+|++++|++++.|+.+++|+........
T Consensus 81 i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 159 (577)
T 2ymu_A 81 VKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASD 159 (577)
T ss_dssp EEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred EEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceeccc
Confidence 999996 578889999999999999999999999999999999999975432110
Q ss_pred -------------EEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 148 -------------EKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 148 -------------~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
......|...|.++.|+|++++|++++.| .|++||. +++.+..+. .+...|.+++|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~-------~~~~~v~~~~~s~ 231 (577)
T 2ymu_A 160 DKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-------GHSSSVRGVAFSP 231 (577)
T ss_dssp TSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE-------CCSSCEEEEEECT
T ss_pred ccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEe-------cCCCCEEEEEECC
Confidence 12233466788999999999999999999 9999995 567776665 3378899999999
Q ss_pred CCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcce
Q psy12614 214 DFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW 292 (708)
Q Consensus 214 ~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~ 292 (708)
+++ +++++.|+.|++||. +++.+..+.+|...|.+++|+|+++.|++++.|+.|++|+... +
T Consensus 232 dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~---------~------- 294 (577)
T 2ymu_A 232 DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG---------Q------- 294 (577)
T ss_dssp TSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS---------C-------
T ss_pred CCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC---------c-------
Confidence 995 999999999999995 5788889999999999999999999999999999999999764 2
Q ss_pred EEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEe
Q psy12614 293 VRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSL 369 (708)
Q Consensus 293 ~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~ 369 (708)
....+.+|...|.+++++ +..+++++.|+.+++|++....+..+..+.....+++++|++++++++ .++.+++|+.
T Consensus 295 -~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~ 373 (577)
T 2ymu_A 295 -LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 373 (577)
T ss_dssp -EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred -EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC
Confidence 466788999999999999 889999999999999999988887777666777889999999999985 7899999995
Q ss_pred cCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEEEEecCCcceeEEeecCCc
Q psy12614 370 GSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHSLDLDGDKPQISRIKNLPA 448 (708)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~ 448 (708)
.. .+......|...|.+++|+|+|++|+++ .|+.|++|+.. .. .+.. +.+
T Consensus 374 ~~----------------------~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~---~~-~~~~---~~~ 424 (577)
T 2ymu_A 374 NG----------------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN---GQ-LLQT---LTG 424 (577)
T ss_dssp TC----------------------CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT---CC-EEEE---EEC
T ss_pred CC----------------------CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC---CC-EEEE---ecC
Confidence 43 3455566889999999999999999985 59999999853 22 2333 556
Q ss_pred ccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEE
Q psy12614 449 PLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIW 526 (708)
Q Consensus 449 ~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw 526 (708)
|.. .|++++|+||+++|++++.|+. +|+.+. +.+..+. +| ...|++++|+||+++||+++.|+.|++|
T Consensus 425 ~~~--~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~---~~~~~~~---~~--~~~v~~~~~spd~~~las~~~d~~i~iw 494 (577)
T 2ymu_A 425 HSS--SVWGVAFSPDDQTIASASDDKTVKLWNRNG---QLLQTLT---GH--SSSVRGVAFSPDGQTIASASDDKTVKLW 494 (577)
T ss_dssp CSS--CEEEEEECTTSSEEEEEETTSEEEEEETTS---CEEEEEE---CC--SSCEEEEEECTTSCEEEEEETTSEEEEE
T ss_pred CCC--CeEEEEECCCCCEEEEEcCCCEEEEEECCC---CEEEEEc---CC--CCCEEEEEEcCCCCEEEEEeCCCEEEEE
Confidence 654 7888999999999999999998 888643 3445554 45 7789999999999999999999999999
Q ss_pred ECC-ceeeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCC
Q psy12614 527 KNG-QHHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDS 605 (708)
Q Consensus 527 ~~~-~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~ 605 (708)
|.. +....+.+|...|++++|+||+++||+++.||.|++||.. ++.. ..+.+|.++|.+++|+|||+
T Consensus 495 ~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~~~~-----------~~~~~h~~~v~~~~fs~dg~ 562 (577)
T 2ymu_A 495 NRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLL-----------QTLTGHSSSVWGVAFSPDGQ 562 (577)
T ss_dssp ETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SCEE-----------EEEECCSSCEEEEEECTTSS
T ss_pred cCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-CCEE-----------EEEcCCCCCEEEEEEcCCCC
Confidence 987 5556899999999999999999999999999999999964 4433 46778999999999999999
Q ss_pred ceEEEEcCeeEEEEe
Q psy12614 606 SLIYLMDDSALCVIN 620 (708)
Q Consensus 606 ~l~~~~~d~~i~~wd 620 (708)
+|++++.|++|++||
T Consensus 563 ~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 563 TIASASSDKTVKLWN 577 (577)
T ss_dssp CEEEEETTSCEEEEC
T ss_pred EEEEEeCCCEEEEeC
Confidence 999999999999997
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4e-67 Score=566.94 Aligned_cols=530 Identities=14% Similarity=0.147 Sum_probs=435.5
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC
Q psy12614 23 APEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR 100 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~ 100 (708)
..+.+.+.+++|+|||++||+++ ++.|+|||+.++.... .+.+|. ..|++++|+ |++||+|+.|++|++||+.+
T Consensus 15 ~~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~-~~~~h~--~~v~~~~~spdg~~lasg~~d~~v~lWd~~~ 90 (611)
T 1nr0_A 15 RTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTE-IYTEHS--HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ 90 (611)
T ss_dssp CCCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCE-EECCCS--SCEEEEEECTTSSEEEEEETTSEEEEEESSS
T ss_pred CcccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCe-EecCCC--CceEEEEECCCCcEEEEEeCCCCEEEeECCC
Confidence 34568889999999999999998 4699999999887776 899999 999999999 99999999999999999975
Q ss_pred C--eEeEEEeecCCceEEEEEecCCCEEEEEeCC----CcEEEEEccCCcEEEEEecccccccEEEEEECCCCC-EEEEe
Q psy12614 101 L--NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ----GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD-YLVTG 173 (708)
Q Consensus 101 ~--~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-~l~~~ 173 (708)
+ .....+.+|.+.|.+++|+||+++||+++.+ +.|++|| .++.. ..+.+|...|.+++|+|++. .|+++
T Consensus 91 ~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~--~~l~gh~~~v~~v~f~p~~~~~l~s~ 166 (611)
T 1nr0_A 91 TTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSN--GNLTGQARAMNSVDFKPSRPFRIISG 166 (611)
T ss_dssp TTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBC--BCCCCCSSCEEEEEECSSSSCEEEEE
T ss_pred CcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCc--ceecCCCCCceEEEECCCCCeEEEEE
Confidence 4 3456788999999999999999999998865 3677776 44444 67889999999999999987 69999
Q ss_pred cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee-------ccc
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK-------THK 244 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~-------~~~ 244 (708)
+.| +|++||..+++....+. +|...|.+++|+|||+ +++++.|+.|++||+.+++.+..+. +|.
T Consensus 167 s~D~~v~lwd~~~~~~~~~l~-------~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~ 239 (611)
T 1nr0_A 167 SDDNTVAIFEGPPFKFKSTFG-------EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS 239 (611)
T ss_dssp ETTSCEEEEETTTBEEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS
T ss_pred eCCCeEEEEECCCCeEeeeec-------cccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccC
Confidence 999 99999998888777664 4488999999999995 8999999999999999999888874 799
Q ss_pred cCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec---cccceEEEEEeCCEEEEEcCC
Q psy12614 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI---HEGDVKSLALHGNRLYSGGLD 321 (708)
Q Consensus 245 ~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~v~~l~~~~~~l~s~~~d 321 (708)
..|.+++|+|++++|++++.|+.|++||+.+ ++ ....+.. +...+..+.+.+..+++++.|
T Consensus 240 ~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~--------~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 303 (611)
T 1nr0_A 240 GSVFGLTWSPDGTKIASASADKTIKIWNVAT--------LK--------VEKTIPVGTRIEDQQLGIIWTKQALVSISAN 303 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTT--------TE--------EEEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEeCCC--------Cc--------eeeeecCCCCccceeEEEEEcCCEEEEEeCC
Confidence 9999999999999999999999999999988 54 3333432 334566777789999999999
Q ss_pred CeEEEEeCCCCce-eecCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE
Q psy12614 322 SYLSLSYYPPKTL-VKYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS 399 (708)
Q Consensus 322 ~~i~iw~~~~~~~-~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (708)
+.+++|+...... ..+.++.....+++++|+|++++++ .|+.|++||+.++. ......
T Consensus 304 ~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~--------------------~~~~~~ 363 (611)
T 1nr0_A 304 GFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI--------------------SNRVFP 363 (611)
T ss_dssp CCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------------------EEECSS
T ss_pred CcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc--------------------eeeecc
Confidence 9999999987653 3344566677899999999999985 89999999998765 222222
Q ss_pred ecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcc----------eeEEe-------------------------e
Q psy12614 400 AVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKP----------QISRI-------------------------K 444 (708)
Q Consensus 400 ~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~----------~~~~~-------------------------~ 444 (708)
..|...|.++++++++.++..+.|+.+++|++....... ....+ .
T Consensus 364 ~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~ 443 (611)
T 1nr0_A 364 DVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLT 443 (611)
T ss_dssp CSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEE
T ss_pred cCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCcee
Confidence 468889999999998876666779999999875421100 00000 0
Q ss_pred cCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCe
Q psy12614 445 NLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSH 522 (708)
Q Consensus 445 ~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~ 522 (708)
.++ + ...+.+++|+|||++||+++.|+. +|++..+....+.. .+| ...|++++|||||++|++++.|++
T Consensus 444 ~~~-~--~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~----~~h--~~~v~~v~fspdg~~las~s~d~~ 514 (611)
T 1nr0_A 444 EVP-I--SYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT----IVH--PAEITSVAFSNNGAFLVATDQSRK 514 (611)
T ss_dssp EEE-C--SSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE----EEC--SSCEEEEEECTTSSEEEEEETTSC
T ss_pred eee-c--CCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec----cCC--CCceEEEEECCCCCEEEEEcCCCC
Confidence 000 1 235678999999999999999999 99998763322232 245 779999999999999999999999
Q ss_pred EEEEECCc-eee--e--cCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcC-CCCee
Q psy12614 523 VVIWKNGQ-HHA--S--LPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSR-QLPVL 596 (708)
Q Consensus 523 i~iw~~~~-~~~--~--~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~ 596 (708)
|++|++.+ ... . +.+|...|.+++|+||+++||+++.|++|++||++++... ....+.+| ...|.
T Consensus 515 v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~---------~~~~~~~h~~~~v~ 585 (611)
T 1nr0_A 515 VIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDH---------PIIIKGAHAMSSVN 585 (611)
T ss_dssp EEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSC---------CEEETTSSTTSCEE
T ss_pred EEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccc---------cchhhccCcccCee
Confidence 99999985 333 2 3449999999999999999999999999999999876532 11245578 89999
Q ss_pred EEEeCCCCCceEEEEcCeeEEEEecC
Q psy12614 597 GIEFDPQDSSLIYLMDDSALCVINKN 622 (708)
Q Consensus 597 ~l~~s~~~~~l~~~~~d~~i~~wd~~ 622 (708)
+++|+||++ |++++.|++|++||+.
T Consensus 586 ~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 586 SVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp EEEEEETTE-EEEEETTSCEEEEECC
T ss_pred EEEEcCCCE-EEEecCCCCEEEEecc
Confidence 999999999 9999999999999983
No 3
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8.7e-64 Score=540.86 Aligned_cols=494 Identities=14% Similarity=0.201 Sum_probs=405.3
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe-EEEEEecCCCCCcEEEEEEe--CCEEEEEcCC---
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH-VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ--- 90 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~-~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d--- 90 (708)
...+.+.+|.+.|++++|+|+|++||+|+.||+|+|||+.+++. +...+.+|. ++|.+++|+ +++|++++.+
T Consensus 50 ~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~--~~v~~v~fs~dg~~l~~~~~~~~~ 127 (611)
T 1nr0_A 50 TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFS--GPVKDISWDSESKRIAAVGEGRER 127 (611)
T ss_dssp SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSS--SCEEEEEECTTSCEEEEEECCSSC
T ss_pred ccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccC--CceEEEEECCCCCEEEEEECCCCc
Confidence 34567889999999999999999999999999999999976433 334788999 999999999 8899988765
Q ss_pred -CcEEEEECCCCeEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCC
Q psy12614 91 -GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD 168 (708)
Q Consensus 91 -~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~ 168 (708)
+.|++|| +++....+.+|...|++++|+|++. .|++++.|++|++||..+++.. ..+.+|...|.+++|+||++
T Consensus 128 ~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~--~~l~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 128 FGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFK--STFGEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp SEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEE--EEECCCSSCEEEEEECTTSS
T ss_pred eeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEe--eeeccccCceEEEEECCCCC
Confidence 3677776 5667778899999999999999987 5999999999999999888776 78899999999999999999
Q ss_pred EEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEE-------
Q psy12614 169 YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSD------- 239 (708)
Q Consensus 169 ~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~------- 239 (708)
+|++++.| +|++||+.+++.+..+.........|...|.+++|+|+|+ +++++.|+.|++||+.+++.+..
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 99999999 9999999999988776421100002488999999999995 99999999999999988765443
Q ss_pred ------------------------------------eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCC
Q psy12614 240 ------------------------------------VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTS 283 (708)
Q Consensus 240 ------------------------------------~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 283 (708)
+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 284 ~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~-------- 355 (611)
T 1nr0_A 284 EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST-------- 355 (611)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--------
T ss_pred cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC--------
Confidence 347889999999999999999999999999999998
Q ss_pred CCCCCCcceEEeEEE-eccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecC----ccCCCCceEEEEcCCcEEE
Q psy12614 284 GPEQGSSVWVRSVNR-VIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYP----CTLAQSTPVSLAKDIQHVL 357 (708)
Q Consensus 284 g~~~~~~~~~~~~~~-~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~----~~~~~~~~~~~s~~~~~l~ 357 (708)
++ ....+ .+|...|.+++++ +..+++++.|+.+++|++.+....... ....+...++++|+++.++
T Consensus 356 ~~--------~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~ 427 (611)
T 1nr0_A 356 GI--------SNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAV 427 (611)
T ss_dssp CC--------EEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEE
T ss_pred Cc--------eeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEE
Confidence 64 22222 5789999999999 778999999999999998775422110 0123446788999998888
Q ss_pred EEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCC
Q psy12614 358 LQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGD 436 (708)
Q Consensus 358 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~ 436 (708)
++.++.+.+|+.. ++... .+...+.+++|+|||++||++. |++|++|++.. .
T Consensus 428 ~~~~~~v~~~~~~-----------------------~~~~~--~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~--~ 480 (611)
T 1nr0_A 428 AACYKHIAIYSHG-----------------------KLTEV--PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSG--A 480 (611)
T ss_dssp EEESSEEEEEETT-----------------------EEEEE--ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEET--T
T ss_pred EEeCceEEEEeCC-----------------------ceeee--ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccC--C
Confidence 8888999999822 22222 3677899999999999999955 99999999985 2
Q ss_pred cceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEE
Q psy12614 437 KPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYI 514 (708)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 514 (708)
. +..+.. .+|.. .|++++|+|||++|++++.|+. +|++.... +.+.. ....+| ...|++++|+|||++|
T Consensus 481 ~--~~~~~~-~~h~~--~v~~v~fspdg~~las~s~d~~v~~w~~~~~~-~~~~~-~~~~~H--~~~V~~v~fspdg~~l 551 (611)
T 1nr0_A 481 S--VSEVKT-IVHPA--EITSVAFSNNGAFLVATDQSRKVIPYSVANNF-ELAHT-NSWTFH--TAKVACVSWSPDNVRL 551 (611)
T ss_dssp E--EEEEEE-EECSS--CEEEEEECTTSSEEEEEETTSCEEEEEGGGTT-EESCC-CCCCCC--SSCEEEEEECTTSSEE
T ss_pred c--eeeeec-cCCCC--ceEEEEECCCCCEEEEEcCCCCEEEEEcCCCC-ceeee-eeeeec--ccceeEEEECCCCCEE
Confidence 2 221111 34543 7888999999999999999999 88887621 22221 112236 8899999999999999
Q ss_pred EEEecCCeEEEEECCce---e-eecCCC-CCCceEEEEcCCCCEEEEEecCCcEEEEEcC
Q psy12614 515 VCADRKSHVVIWKNGQH---H-ASLPRY-RKPSTAMAIHPTLSTLVTVYSDHRIVEFDLN 569 (708)
Q Consensus 515 ~~~~~d~~i~iw~~~~~---~-~~~~~~-~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~ 569 (708)
|+++.|++|++|++.+. . ..+.+| ...|++++|+||++ |++++.|++|++|+++
T Consensus 552 asgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 552 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp EEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred EEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEecc
Confidence 99999999999999842 2 467789 89999999999998 9999999999999974
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.1e-62 Score=527.21 Aligned_cols=485 Identities=16% Similarity=0.248 Sum_probs=412.8
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI 140 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~ 140 (708)
..|+||. +.|++++|+ |++||+++.|++|++||. +++++.++.+|.+.|++++|+||+++||+++.|+.|++||.
T Consensus 10 ~~L~GH~--~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~ 86 (577)
T 2ymu_A 10 NRLEAHS--SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 86 (577)
T ss_dssp EEECCCS--SCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eEECCCC--CcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 4799999 999999999 899999999999999995 77899999999999999999999999999999999999996
Q ss_pred cCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEE---------Eeccc-------------
Q psy12614 141 SDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKM---------SLDKS------------- 197 (708)
Q Consensus 141 ~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~---------~~~~~------------- 197 (708)
. ++.+ ..+.+|...|.+++|+|++++|++++.| .+++|+.......... .....
T Consensus 87 ~-~~~~--~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 163 (577)
T 2ymu_A 87 N-GQLL--QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV 163 (577)
T ss_dssp T-SCEE--EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred C-CCEE--EEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccce
Confidence 5 4554 6788999999999999999999999999 9999997543221110 00000
Q ss_pred -----------CCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecC
Q psy12614 198 -----------SKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD 265 (708)
Q Consensus 198 -----------~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 265 (708)
....+...+.+++++|++. +++++.||.|++||. +++.+..+.+|...|.+++|+|++++|++++.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d 242 (577)
T 2ymu_A 164 KLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 242 (577)
T ss_dssp EEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred eccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCC
Confidence 0003367788999999996 899999999999995 678888999999999999999999999999999
Q ss_pred CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCC
Q psy12614 266 PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQ 343 (708)
Q Consensus 266 g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~ 343 (708)
+.|++|+... + ....+.+|...|.+++|+ +..+++++.|+.+++|+.....+..+.++...
T Consensus 243 ~~i~~w~~~~---------~--------~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~ 305 (577)
T 2ymu_A 243 KTVKLWNRNG---------Q--------LLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSS 305 (577)
T ss_dssp SCEEEECTTS---------C--------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSC
T ss_pred CEEEEEeCCC---------C--------EEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCC
Confidence 9999999754 2 567788999999999999 88999999999999999988777777767777
Q ss_pred CceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc
Q psy12614 344 STPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST 422 (708)
Q Consensus 344 ~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~ 422 (708)
...++++|+++.++++ .++.+++|+..... ......+...+.+++|+|+|++|+++.
T Consensus 306 v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~----------------------~~~~~~~~~~v~~~~~s~~g~~l~~~~ 363 (577)
T 2ymu_A 306 VWGVAFSPDGQTIASASDDKTVKLWNRNGQH----------------------LQTLTGHSSSVWGVAFSPDGQTIASAS 363 (577)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTSCE----------------------EEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCCCe----------------------eEEEeCCCCCEEEEEECCCCCEEEEEe
Confidence 7889999999999874 78999999976532 334457889999999999999999865
Q ss_pred -CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccC
Q psy12614 423 -ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMS 499 (708)
Q Consensus 423 -d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~ 499 (708)
|+.+++|+.. .. .+.. +.+|.. .|++++|+||+++|++++.|+. +|+.. .+.+..+. +| .
T Consensus 364 ~dg~v~~~~~~---~~-~~~~---~~~~~~--~v~~~~~s~dg~~l~~~~~d~~v~~~~~~---~~~~~~~~---~~--~ 426 (577)
T 2ymu_A 364 DDKTVKLWNRN---GQ-LLQT---LTGHSS--SVRGVAFSPDGQTIASASDDKTVKLWNRN---GQLLQTLT---GH--S 426 (577)
T ss_dssp TTSEEEEEETT---CC-EEEE---EECCSS--CEEEEEECTTSSCEEEEETTSEEEEECTT---CCEEEEEE---CC--S
T ss_pred CCCEEEEEcCC---CC-EEEE---ecCCCC--CeEEEEECCCCCEEEEEeCCCEEEEEeCC---CCEEEEec---CC--C
Confidence 9999999953 22 2333 455644 7888999999999999999998 77643 24555554 45 7
Q ss_pred cceEEEEECCCCcEEEEEecCCeEEEEECC-ceeeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhh
Q psy12614 500 DVISLVQMSECKQYIVCADRKSHVVIWKNG-QHHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSR 578 (708)
Q Consensus 500 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 578 (708)
..|++++|+||+++|++++.|+.|++||.. +....+.+|...|++++|+||+++|++++.|+.|++||.. ++..
T Consensus 427 ~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~~---- 501 (577)
T 2ymu_A 427 SSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLL---- 501 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCEE----
T ss_pred CCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCEE----
Confidence 789999999999999999999999999988 4555889999999999999999999999999999999964 4433
Q ss_pred hhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecC
Q psy12614 579 KLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKN 622 (708)
Q Consensus 579 ~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~ 622 (708)
..+.+|...|.+++|+|||++|++++.|+.|++||..
T Consensus 502 -------~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 502 -------QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp -------EEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred -------EEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 4667899999999999999999999999999999964
No 5
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8.2e-62 Score=572.42 Aligned_cols=549 Identities=12% Similarity=0.169 Sum_probs=456.3
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
...+.+|.+.|++++|+|+|++||+|+.||.|+|||+.+++.+. .+.+|. ..|.+++|+ +++|++++.||+|++|
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~-~~~~h~--~~v~~~~~s~~~~~l~s~~~d~~v~vw 684 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLL-DIKAHE--DEVLCCAFSSDDSYIATCSADKKVKIW 684 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-EECCCS--SCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEE-EeccCC--CCEEEEEEecCCCEEEEEeCCCeEEEE
Confidence 34678999999999999999999999999999999999998876 889999 999999999 8999999999999999
Q ss_pred ECCCCeEeEEEeecCCceEEEEEec--CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec
Q psy12614 97 DMRRLNIKSSTAVTSGTCWCLSVHK--KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~s~--~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~ 174 (708)
|+.+++++..+.+|...|.+++|+| ++.++++|+.|+.|++||+.+++.. ..+.+|.+.|.+++|+|++++|++++
T Consensus 685 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~--~~~~~h~~~v~~~~~sp~~~~l~s~s 762 (1249)
T 3sfz_A 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECR--NTMFGHTNSVNHCRFSPDDELLASCS 762 (1249)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEE--EEECCCSSCEEEEEECSSTTEEEEEE
T ss_pred ECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchh--heecCCCCCEEEEEEecCCCEEEEEE
Confidence 9999999999999999999999999 5568999999999999999999887 77889999999999999999999999
Q ss_pred CC-eEEEEEcCCCceEEEEEeccc------------------------------------------------CCCCCcee
Q psy12614 175 AA-AVRVWDIHKGHAIHKMSLDKS------------------------------------------------SKFSKNTA 205 (708)
Q Consensus 175 ~d-~i~iwd~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~ 205 (708)
.| .|++||+.+++....+..... ....+...
T Consensus 763 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 842 (1249)
T 3sfz_A 763 ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHST 842 (1249)
T ss_dssp SSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSC
T ss_pred CCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCc
Confidence 99 999999988876665542110 00033677
Q ss_pred EEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCC
Q psy12614 206 VWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSG 284 (708)
Q Consensus 206 v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g 284 (708)
+.+++|+|++. +++++.+|.|++||+.++..+..+.+|...|.+++|+|++++|++++.||.|++|++...........
T Consensus 843 v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~ 922 (1249)
T 3sfz_A 843 IQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVL 922 (1249)
T ss_dssp CCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSE
T ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecc
Confidence 88999999995 88999999999999999999999999999999999999999999999999999999764100000000
Q ss_pred C-C-------C--------CCcceE-----EeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc-eeecCcc
Q psy12614 285 P-E-------Q--------GSSVWV-----RSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT-LVKYPCT 340 (708)
Q Consensus 285 ~-~-------~--------~~~~~~-----~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~ 340 (708)
. . . ...... .......+...+.+++++ ++++++++.+|.|++|++.+.. ......+
T Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h 1002 (1249)
T 3sfz_A 923 KQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGH 1002 (1249)
T ss_dssp EEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCC
T ss_pred cceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccC
Confidence 0 0 0 000000 000112234678899999 8999999999999999998876 4445556
Q ss_pred CCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEE
Q psy12614 341 LAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVA 419 (708)
Q Consensus 341 ~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 419 (708)
......++++|++++++++ .++.|++|++.++. . . ....+...+.+++++|++.+++
T Consensus 1003 ~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~--------------------~-~-~~~~~~~~v~~~~~~~~~~l~~ 1060 (1249)
T 3sfz_A 1003 KKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGD--------------------Y-V-FLQAHQETVKDFRLLQDSRLLS 1060 (1249)
T ss_dssp SSCCCCEEECSSSSCEEEECSSSBEEEEETTTTE--------------------E-E-CCBCCSSCEEEEEECSSSEEEE
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc--------------------e-E-EEecCCCcEEEEEEcCCCcEEE
Confidence 6778899999999999885 78999999998755 1 1 2347888999999999988777
Q ss_pred EEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCc
Q psy12614 420 YSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNL 497 (708)
Q Consensus 420 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~ 497 (708)
.+.|+.|++||+.++.. ... +.+|.. .|++++|+||++++++++.|+. +|++..+. .+....+|
T Consensus 1061 ~~~dg~v~vwd~~~~~~---~~~---~~~~~~--~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~-----~~~~l~~h- 1126 (1249)
T 3sfz_A 1061 WSFDGTVKVWNVITGRI---ERD---FTCHQG--TVLSCAISSDATKFSSTSADKTAKIWSFDLLS-----PLHELKGH- 1126 (1249)
T ss_dssp EESSSEEEEEETTTTCC---CEE---EECCSS--CCCCEEECSSSSSCEEECCSSCCCEECSSSSS-----CSBCCCCC-
T ss_pred EECCCcEEEEECCCCce---eEE---EcccCC--cEEEEEECCCCCEEEEEcCCCcEEEEECCCcc-----eeeeeccC-
Confidence 78899999999986332 222 445544 6777999999999999999999 89888772 33344566
Q ss_pred cCcceEEEEECCCCcEEEEEecCCeEEEEECCceee--ec---------CCCCCCceEEEEcCCCCEEEEEecCCcEEEE
Q psy12614 498 MSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA--SL---------PRYRKPSTAMAIHPTLSTLVTVYSDHRIVEF 566 (708)
Q Consensus 498 ~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~--~~---------~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vw 566 (708)
...|++++|+|+|++|++++.||.|++||+.+... .+ .+|.+.|++++|+||+++|++++ |.|++|
T Consensus 1127 -~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vw 1203 (1249)
T 3sfz_A 1127 -NGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWW 1203 (1249)
T ss_dssp -SSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES--SSEEEB
T ss_pred -CCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC--CeEEEE
Confidence 88999999999999999999999999999984432 22 57899999999999999999885 899999
Q ss_pred EcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecC
Q psy12614 567 DLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKN 622 (708)
Q Consensus 567 d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~ 622 (708)
|+.+++.. ..+..|...|.+++|+|||++|++++.||.|++|++.
T Consensus 1204 d~~~g~~~-----------~~~~~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1204 NVATGDSS-----------QTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp CSSSCBCC-----------CCCCCSSCCCCCCEECSSSCCEEEECTTCCEEEECCC
T ss_pred ECCCCcee-----------eeeeccCCcccEEEECCCCCEEEEecCCcEEEEEeec
Confidence 99998866 4566788999999999999999999999999999974
No 6
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.5e-59 Score=512.43 Aligned_cols=517 Identities=12% Similarity=0.139 Sum_probs=437.2
Q ss_pred eeeeeccCCCCc-EEEEEEcC--CCCEEEEEeCCCcEEEEeCCCC-------CeEEEEEecCCCCCcEEEEEEe--CCEE
Q psy12614 17 HNIKFYAPEPKV-INCIACEP--KSSRLAVSRADQSIEIWDISET-------PHVDRVFIGDPLSNSIECLTWF--NDRL 84 (708)
Q Consensus 17 ~~~~~~~~h~~~-v~~~~~s~--~~~~la~~~~dg~v~iwd~~~~-------~~~~~~~~~h~~~~~v~~l~~~--~~~l 84 (708)
+..+.+.+|.+. |++++|+| ++++||+|+.||.|+|||+.++ ......+.+|. ..|.+++|+ +++|
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l 131 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLA--GPISDISWDFEGRRL 131 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCS--SCEEEEEECTTSSEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhccc--ccEEEEEEeCCCCEE
Confidence 356678899999 99999999 9999999999999999999754 22334788898 999999999 8899
Q ss_pred EEEcCC----CcEEEEECCCCeEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccc---
Q psy12614 85 FSGGLQ----GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQG--- 156 (708)
Q Consensus 85 ~s~~~d----~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--- 156 (708)
++++.+ +.|.+|| .++.+..+.+|...|.+++|+|+++ ++++++.|+.|++||+.+++.. ..+.+|..
T Consensus 132 ~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~--~~~~~~~~~~~ 207 (615)
T 1pgu_A 132 CVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS--ASDRTHHKQGS 207 (615)
T ss_dssp EEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEE--EEECSSSCTTC
T ss_pred EEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCccee--eeecccCCCCc
Confidence 999887 6888887 6778889999999999999999998 8999999999999999998877 67888988
Q ss_pred cEEEEEECCC-CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCC
Q psy12614 157 RILCTAWHSS-GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKT 233 (708)
Q Consensus 157 ~v~~~~~s~d-~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~ 233 (708)
.|.+++|+|+ +++|++++.| .|++||+.+++.+..+..... .+...|.+++|+ ++. +++++.||.|++||+++
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQE---PVQGGIFALSWL-DSQKFATVGADATIRVWDVTT 283 (615)
T ss_dssp CEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTB---CCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT
T ss_pred eEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccccc---ccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC
Confidence 9999999999 9999999999 999999999998887732100 127889999999 874 99999999999999999
Q ss_pred CeeEEEeecc----ccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEE
Q psy12614 234 GVQWSDVKTH----KKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLA 309 (708)
Q Consensus 234 ~~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~ 309 (708)
++.+..+..+ ...+.++.|+ +++++++++.||.|++||+.+ ++ ....+.+|...|.+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~--------~~--------~~~~~~~~~~~v~~~~ 346 (615)
T 1pgu_A 284 SKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGH--------DE--------VLKTISGHNKGITALT 346 (615)
T ss_dssp TEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTE--------EE--------EEEEECCCSSCEEEEE
T ss_pred CcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCC--------Cc--------EEEEEeCCCCCEEEEE
Confidence 9999888766 4678888886 889999999999999999987 54 6678889999999999
Q ss_pred EeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCC
Q psy12614 310 LHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLL 389 (708)
Q Consensus 310 ~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 389 (708)
| .+ +++++.|+.|++|++. .+. ..+......++++++..++..+.++.+++|++....
T Consensus 347 ~-~~-l~~~~~dg~i~~w~~~--~~~--~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~---------------- 404 (615)
T 1pgu_A 347 V-NP-LISGSYDGRIMEWSSS--SMH--QDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHE---------------- 404 (615)
T ss_dssp T-TT-TEEEETTSCEEETTTT--EEE--CCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEE----------------
T ss_pred e-cC-cEEECCCCeEEEEEch--hhc--CcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCc----------------
Confidence 9 88 9999999999999998 333 435566678888445555555799999999988644
Q ss_pred CCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEE
Q psy12614 390 SFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLA 469 (708)
Q Consensus 390 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~ 469 (708)
....+.+++++|++.+++++.++.+.+|++.. +. .+..+ . + ...+++++|+ +++|++
T Consensus 405 ------------~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~---~-~--~~~~~~~~~~--~~~l~~ 461 (615)
T 1pgu_A 405 ------------FGSQPKVASANNDGFTAVLTNDDDLLILQSFT--GD-IIKSV---R-L--NSPGSAVSLS--QNYVAV 461 (615)
T ss_dssp ------------CSSCEEEEEECSSSEEEEEETTSEEEEEETTT--CC-EEEEE---E-C--SSCEEEEEEC--SSEEEE
T ss_pred ------------ccCCceEEEEcCCCCEEEEeCCCceEEEeccC--Cc-eeeec---c-c--CCCceEEEEc--CCEEEE
Confidence 11267889999999999989999999999754 22 23322 1 2 3367779999 889999
Q ss_pred Eec-CCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCce--eeecCC-CCCCce
Q psy12614 470 VSL-NGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQH--HASLPR-YRKPST 543 (708)
Q Consensus 470 ~~~-dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~-~~~~v~ 543 (708)
++. ++. +|++..+ +... ....+| ...|++++|+|++++|++++.|+.|++||+.+. ...+.+ |...|+
T Consensus 462 ~~~~d~~i~~~~~~~~--~~~~--~~~~~~--~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~ 535 (615)
T 1pgu_A 462 GLEEGNTIQVFKLSDL--EVSF--DLKTPL--RAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKIN 535 (615)
T ss_dssp EETTTSCEEEEETTEE--EEEE--ECSSCC--SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEE
T ss_pred eecCCCeEEEEECCCc--cccc--cccCCc--cCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCcee
Confidence 999 888 7777654 3321 344456 889999999999999999999999999999844 346777 999999
Q ss_pred EEEEcC----------CCCEEEEEecCCcEEEEEcCCC-CCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEc
Q psy12614 544 AMAIHP----------TLSTLVTVYSDHRIVEFDLNRK-AFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMD 612 (708)
Q Consensus 544 ~l~~s~----------d~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~ 612 (708)
+++|+| ++++|++++.||.|++||++++ +.. ..+.+|...|.+++|+|+++ |++++.
T Consensus 536 ~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-----------~~~~~h~~~v~~l~~s~~~~-l~s~~~ 603 (615)
T 1pgu_A 536 AISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKII-----------KALNAHKDGVNNLLWETPST-LVSSGA 603 (615)
T ss_dssp EEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCE-----------EETTSSTTCEEEEEEEETTE-EEEEET
T ss_pred EEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceec-----------hhhhcCccceEEEEEcCCCC-eEEecC
Confidence 999999 9999999999999999999987 433 45778999999999999999 999999
Q ss_pred CeeEEEEecCC
Q psy12614 613 DSALCVINKNK 623 (708)
Q Consensus 613 d~~i~~wd~~~ 623 (708)
|+.|++||++.
T Consensus 604 d~~v~iw~~~~ 614 (615)
T 1pgu_A 604 DACIKRWNVVL 614 (615)
T ss_dssp TSCEEEEEEC-
T ss_pred CceEEEEeeec
Confidence 99999999864
No 7
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.3e-57 Score=495.25 Aligned_cols=541 Identities=16% Similarity=0.141 Sum_probs=448.6
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC----CeEEEEEecCCCCCc-EEEEEEe----CCEEEEEcCCCcE
Q psy12614 23 APEPKVINCIACEPKSSRLAVSRADQSIEIWDISET----PHVDRVFIGDPLSNS-IECLTWF----NDRLFSGGLQGFV 93 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~----~~~~~~~~~h~~~~~-v~~l~~~----~~~l~s~~~d~~i 93 (708)
..|.+.|++++|+|++++||+++ ++.|.|||+.++ +.+. .+.+|. .. |.+++|+ +++|++++.||.|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~-~~~~h~--~~~v~~~~~sp~~~~~~l~s~~~dg~v 90 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVV-QFTGHG--SSVVTTVKFSPIKGSQYLCSGDESGKV 90 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEE-EECTTT--TSCEEEEEECSSTTCCEEEEEETTSEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccce-EEecCC--CceEEEEEECcCCCCCEEEEecCCCEE
Confidence 46889999999999999999998 789999999988 6665 899999 99 9999998 5899999999999
Q ss_pred EEEECCCC--------eEeEEEeecCCceEEEEEecCCCEEEEEeCC----CcEEEEEccCCcEEEEEecccccccEEEE
Q psy12614 94 NEYDMRRL--------NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ----GHINLFQISDEGLLYEKLLDRQQGRILCT 161 (708)
Q Consensus 94 ~vwd~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 161 (708)
++||+.++ +....+..|...|.+++|+|++++|++++.+ +.|++|| .++.. ..+.+|...|.++
T Consensus 91 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~--~~~~~~~~~v~~~ 166 (615)
T 1pgu_A 91 IVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSL--GEVSGHSQRINAC 166 (615)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEE--EECCSCSSCEEEE
T ss_pred EEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcc--eeeecCCccEEEE
Confidence 99999855 6778888999999999999999999999987 6788887 55555 6788999999999
Q ss_pred EECCCCC-EEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCce---eEEEEEEccC-CE-EEEEcCCCcEEEEeCCCC
Q psy12614 162 AWHSSGD-YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNT---AVWCVAFCAD-FT-IITGDSGGFVRFWDGKTG 234 (708)
Q Consensus 162 ~~s~d~~-~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~-l~~~~~dg~i~~wd~~~~ 234 (708)
+|+|+++ .+++++.| .|++||+.+++.+..+... .. .|.+++|+|+ ++ +++++.||.|++||+.++
T Consensus 167 ~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 239 (615)
T 1pgu_A 167 HLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH-------HKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG 239 (615)
T ss_dssp EECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSS-------SCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC
T ss_pred EECCCCCcEEEEEeCCCcEEEEeCCCcceeeeeccc-------CCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 9999998 89999999 9999999999888877633 66 8999999999 85 889999999999999999
Q ss_pred eeEEEe-e---ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc----ccceE
Q psy12614 235 VQWSDV-K---THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH----EGDVK 306 (708)
Q Consensus 235 ~~~~~~-~---~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~v~ 306 (708)
+.+..+ . .|...|.+++|+ ++++|++++.|+.|++||+.+ ++ ....+..+ ...+.
T Consensus 240 ~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~--------~~--------~~~~~~~~~~~~~~~~~ 302 (615)
T 1pgu_A 240 EFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT--------SK--------CVQKWTLDKQQLGNQQV 302 (615)
T ss_dssp CEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT--------TE--------EEEEEECCTTCGGGCEE
T ss_pred CEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC--------Cc--------EEEEEcCCCCcccCcee
Confidence 999998 6 899999999999 999999999999999999998 54 45555555 46788
Q ss_pred EEEEe-CCEEEEEcCCCeEEEEeCCCCc-eeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCC
Q psy12614 307 SLALH-GNRLYSGGLDSYLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTT 384 (708)
Q Consensus 307 ~l~~~-~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 384 (708)
++.+. +..+++++.|+.+++||+.+.. +..+..+......+++ |+ ++..+.++.|++|++. .
T Consensus 303 ~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~--l~~~~~dg~i~~w~~~--~----------- 366 (615)
T 1pgu_A 303 GVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP--LISGSYDGRIMEWSSS--S----------- 366 (615)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT--TEEEETTSCEEETTTT--E-----------
T ss_pred EEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC--cEEECCCCeEEEEEch--h-----------
Confidence 88887 9999999999999999998755 4455555667788888 87 5555799999999876 1
Q ss_pred cccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecC
Q psy12614 385 GVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISAD 463 (708)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d 463 (708)
+ . ..|...|.+++| +++..+++ +.|+.+++|++...... ..+.+++|+|+
T Consensus 367 ----------~-~--~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~---------------~~~~~~~~s~~ 417 (615)
T 1pgu_A 367 ----------M-H--QDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFG---------------SQPKVASANND 417 (615)
T ss_dssp ----------E-E--CCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECS---------------SCEEEEEECSS
T ss_pred ----------h-c--CcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCccc---------------CCceEEEEcCC
Confidence 1 1 578899999999 55556666 66999999999862211 13445899999
Q ss_pred CCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEec-CCeEEEEECCcee---eecCC
Q psy12614 464 STLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADR-KSHVVIWKNGQHH---ASLPR 537 (708)
Q Consensus 464 ~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d~~i~iw~~~~~~---~~~~~ 537 (708)
+.+++++ .++. +|++..+ +.+..+.. ...+++++|+ +++|++++. |+.|++||+.+.. ..+.+
T Consensus 418 ~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~ 486 (615)
T 1pgu_A 418 GFTAVLT-NDDDLLILQSFTG--DIIKSVRL------NSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP 486 (615)
T ss_dssp SEEEEEE-TTSEEEEEETTTC--CEEEEEEC------SSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSC
T ss_pred CCEEEEe-CCCceEEEeccCC--ceeeeccc------CCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCC
Confidence 9988887 4444 7776555 56666642 6689999999 899999999 9999999999433 56788
Q ss_pred CCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhc-CCCCeeEEEeCC----------CCCc
Q psy12614 538 YRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLS-RQLPVLGIEFDP----------QDSS 606 (708)
Q Consensus 538 ~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~s~----------~~~~ 606 (708)
|...|++++|+|++++|++++.||.|++||+.+++.. ..+.+ |...|.+++|+| ++++
T Consensus 487 ~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~-----------~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~ 555 (615)
T 1pgu_A 487 LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK-----------TSRWAFRTSKINAISWKPAEKGANEEEIEEDL 555 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-----------ECCSCCCSSCEEEEEECCCC------CCSCCE
T ss_pred ccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcce-----------eEeecCCCCceeEEEEcCccccccccccCCCE
Confidence 9999999999999999999999999999999988765 34555 999999999999 9999
Q ss_pred eEEEEcCeeEEEEecCCCC-CcccCccccCCCCCCCCCCCCCccccccceeeEEEecCcceEEEeecCCCcEEEEee
Q psy12614 607 LIYLMDDSALCVINKNKSL-AHADAKIPRLGPKVVSGDSSNSTHVIESKVAFHFVRRNKHLVYFGSLNDKEMLSVQV 682 (708)
Q Consensus 607 l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 682 (708)
|++++.|+.|++||+.... +.... ..+......+.+.++.+ ++..+. ++.+.+++.
T Consensus 556 l~~~~~dg~i~iw~~~~~~~~~~~~-----------------~~h~~~v~~l~~s~~~~-l~s~~~--d~~v~iw~~ 612 (615)
T 1pgu_A 556 VATGSLDTNIFIYSVKRPMKIIKAL-----------------NAHKDGVNNLLWETPST-LVSSGA--DACIKRWNV 612 (615)
T ss_dssp EEEEETTSCEEEEESSCTTCCEEET-----------------TSSTTCEEEEEEEETTE-EEEEET--TSCEEEEEE
T ss_pred EEEEcCCCcEEEEECCCCceechhh-----------------hcCccceEEEEEcCCCC-eEEecC--CceEEEEee
Confidence 9999999999999997642 11110 01123355678888888 665543 666666653
No 8
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-57 Score=507.41 Aligned_cols=567 Identities=11% Similarity=0.078 Sum_probs=421.0
Q ss_pred eeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCc
Q psy12614 14 YGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGF 92 (708)
Q Consensus 14 ~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~ 92 (708)
+..+.... .+|++.|++++|+|++++||+|+.||.|+|||..+.+... ...|. .+|.+++|+ +++|++++.|++
T Consensus 6 ~~~~~~~~-~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~--~~~~~--~~V~~l~fspg~~L~S~s~D~~ 80 (902)
T 2oaj_A 6 FSLAETNK-YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVI--KLEDR--SAIKEMRFVKGIYLVVINAKDT 80 (902)
T ss_dssp EEEEEEEE-EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEE--ECSSC--CCEEEEEEETTTEEEEEETTCE
T ss_pred eeeccccc-cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEE--EcCCC--CCEEEEEEcCCCEEEEEECcCe
Confidence 44444433 4899999999999999999999999999999998766543 33566 899999999 889999999999
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE---------EecccccccEEEEEE
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE---------KLLDRQQGRILCTAW 163 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~---------~~~~~~~~~v~~~~~ 163 (708)
|++||+.+++++..+. |.+.|++++|+|++++|++|+.||.|++||+.+++.... ..+.+|.+.|.+++|
T Consensus 81 v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~ 159 (902)
T 2oaj_A 81 VYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQW 159 (902)
T ss_dssp EEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEE
T ss_pred EEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEE
Confidence 9999999999988886 668999999999999999999999999999998876421 134678899999999
Q ss_pred CCC-CCEEEEecCC-eEEEEEcCCCceEEEEEeccc------------CCCCCceeEEEEEEccCCE-EEEEcCCCcEEE
Q psy12614 164 HSS-GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKS------------SKFSKNTAVWCVAFCADFT-IITGDSGGFVRF 228 (708)
Q Consensus 164 s~d-~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~------------~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~ 228 (708)
+|+ +..|++++.| .| +||+++++.+..+..... .. .|...|.+++|+|+|+ +++++.||.|++
T Consensus 160 sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~h~~~V~~v~fspdg~~lasgs~Dg~i~l 237 (902)
T 2oaj_A 160 NPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNE-KRTPKVIQSLYHPNSLHIITIHEDNSLVF 237 (902)
T ss_dssp ETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTS-CBCCCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred ccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccccccccc-ccCCCeEEEEEcCCCCEEEEEECCCeEEE
Confidence 996 4788999999 99 999999998887753300 00 1247799999999995 999999999999
Q ss_pred EeCCCCeeEEE--e---ec-------------cccCeEEEEEe----CCC-CEEEEEecC-----CeEEEEEccCCcccc
Q psy12614 229 WDGKTGVQWSD--V---KT-------------HKKDILALTVS----EDE-NYLYCAGVD-----PTVVCFQRTRKPQVC 280 (708)
Q Consensus 229 wd~~~~~~~~~--~---~~-------------~~~~i~~~~~s----~~~-~~l~~~~~d-----g~i~iw~~~~~~~~~ 280 (708)
||+++++++.. + .. |...|.+++|+ |++ .+|++|+.+ +.+.+|++...+...
T Consensus 238 Wd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~ 317 (902)
T 2oaj_A 238 WDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYS 317 (902)
T ss_dssp EETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGG
T ss_pred EECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCcc
Confidence 99999987653 2 11 34579999996 443 467777665 378899853200000
Q ss_pred cC----------CCCCCCCcceEEeEEEe-ccccceEEEEEe------------CCEEEEEcCCCeEEEEeCCCCc-eee
Q psy12614 281 ST----------SGPEQGSSVWVRSVNRV-IHEGDVKSLALH------------GNRLYSGGLDSYLSLSYYPPKT-LVK 336 (708)
Q Consensus 281 ~~----------~g~~~~~~~~~~~~~~~-~~~~~v~~l~~~------------~~~l~s~~~d~~i~iw~~~~~~-~~~ 336 (708)
.. .++ ....+. .+.+.|..+.+. +..+++++.|+.|++|++.++. ...
T Consensus 318 ~~s~~~~~~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~ 389 (902)
T 2oaj_A 318 ITSYEGMKNYYANPK--------QMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDK 389 (902)
T ss_dssp GCCHHHHHHHHHSCS--------EEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECC
T ss_pred ccchhhhhhhhcCcc--------ceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccc
Confidence 00 011 122222 356777777653 2378889999999999986553 111
Q ss_pred -------c----------------------------------CccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCC
Q psy12614 337 -------Y----------------------------------PCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQS 374 (708)
Q Consensus 337 -------~----------------------------------~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~ 374 (708)
+ .++......++++|++++++++ .|+.|++||+..+..
T Consensus 390 ~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~ 469 (902)
T 2oaj_A 390 ASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDI 469 (902)
T ss_dssp GGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTT
T ss_pred cccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccc
Confidence 0 0111223346778999999985 899999999987641
Q ss_pred CCCCCCCCCCcccCCCCceEEEEEE------ecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCc----------
Q psy12614 375 TDLSSHSNTTGVPLLSFPRLIVKMS------AVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDK---------- 437 (708)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~---------- 437 (708)
......... .+|...|.+++|+|||++||+|. |++|+||++...+..
T Consensus 470 ----------------~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~ 533 (902)
T 2oaj_A 470 ----------------QDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGD 533 (902)
T ss_dssp ----------------TTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC-----------
T ss_pred ----------------cCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcc
Confidence 000111111 16788999999999999999965 999999999874210
Q ss_pred -----------------------------ceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEE
Q psy12614 438 -----------------------------PQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEI 486 (708)
Q Consensus 438 -----------------------------~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~ 486 (708)
..++.+..+.+|.. .|++++||||| +||+++.|+. ||+++.. ..
T Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~--~V~svafSpdG-~lAsgs~D~tv~lwd~~~~--~~ 608 (902)
T 2oaj_A 534 LEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKG--KTSAINNSNIG-FVGIAYAAGSLMLIDRRGP--AI 608 (902)
T ss_dssp ----CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSC--SEEEEEECBTS-EEEEEETTSEEEEEETTTT--EE
T ss_pred cceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCC--cEEEEEecCCc-EEEEEeCCCcEEEEECCCC--eE
Confidence 00122333666755 78899999999 9999999998 8887665 44
Q ss_pred EE--EecCCC-CCccCcceEEEEEC-----CCC---cEEEEEecCCeEEEEEC---Cc--eeeecCCC-----CCCceEE
Q psy12614 487 KY--CVDPYK-SNLMSDVISLVQMS-----ECK---QYIVCADRKSHVVIWKN---GQ--HHASLPRY-----RKPSTAM 545 (708)
Q Consensus 487 ~~--~~~~~~-~~~~~~~i~~~~~s-----~~~---~~l~~~~~d~~i~iw~~---~~--~~~~~~~~-----~~~v~~l 545 (708)
+. .+.... +| ...|++++|+ ||| ++|++|+.|++|++||+ .+ ....+.+| .++|.++
T Consensus 609 ~~~~~~~~~~~gh--~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i 686 (902)
T 2oaj_A 609 IYMENIREISGAQ--SACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKI 686 (902)
T ss_dssp EEEEEGGGTCSSC--CCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEE
T ss_pred EEEeehhHhcccc--ccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEE
Confidence 33 233443 77 8999999999 885 89999999999999999 43 33355444 5788888
Q ss_pred E-Ec----------------------CCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEE---E
Q psy12614 546 A-IH----------------------PTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGI---E 599 (708)
Q Consensus 546 ~-~s----------------------~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l---~ 599 (708)
+ |+ +++.+|+++ +..|+||++.++++. +...+|...+.++ .
T Consensus 687 ~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~-----------~k~~~~~~~~~~v~~~~ 753 (902)
T 2oaj_A 687 DAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKST-----------HKGFKYPLAATGLSYIS 753 (902)
T ss_dssp EEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEE-----------EEECSSCEEEEEEEEEE
T ss_pred EeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccceEEEeCccccce-----------eeEcccceeeeEEEEEE
Confidence 7 66 444444433 778999999998765 2334566666776 5
Q ss_pred ------eCCCCCceEEEEcCeeEEEEecCCCCCcccCcc
Q psy12614 600 ------FDPQDSSLIYLMDDSALCVINKNKSLAHADAKI 632 (708)
Q Consensus 600 ------~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 632 (708)
|++++..|++++.||.|++|++....+....+.
T Consensus 754 ~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~~~~~ 792 (902)
T 2oaj_A 754 TVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSEHI 792 (902)
T ss_dssp EECSSSCEEEEEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred eccccccccCceEEEEEeCCCcEEEEECcchHHHhhccC
Confidence 788999999999999999999976665544443
No 9
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.6e-56 Score=522.22 Aligned_cols=491 Identities=15% Similarity=0.211 Sum_probs=418.4
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcE
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFV 93 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i 93 (708)
.+..+.+|.+.|++++|+|++++||+|+.||.|+|||+.+++.+. .+.+|. ..|.+++|+ +..+++++.|+.|
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~-~~~~~~--~~v~~~~~~~~~~~~~l~sg~~d~~v 725 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH-TYDEHS--EQVNCCHFTNKSNHLLLATGSNDFFL 725 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-EEECCS--SCEEEEEECSSSSCCEEEEEETTSCE
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE-EEcCCC--CcEEEEEEecCCCceEEEEEeCCCeE
Confidence 345678999999999999999999999999999999999999887 899999 999999998 4589999999999
Q ss_pred EEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEE------------------------
Q psy12614 94 NEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK------------------------ 149 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~------------------------ 149 (708)
++||+.+++++..+.+|.+.|++++|+|++++|++++.||.|++||+.+++.....
T Consensus 726 ~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 805 (1249)
T 3sfz_A 726 KLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCS 805 (1249)
T ss_dssp EEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCC
T ss_pred EEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEE
Confidence 99999999999999999999999999999999999999999999999876543211
Q ss_pred -----------------------------ecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCC
Q psy12614 150 -----------------------------LLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSK 199 (708)
Q Consensus 150 -----------------------------~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~ 199 (708)
...+|...|.+++|+|+++++++++.+ .|++||+.++..+..+.
T Consensus 806 ~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~------ 879 (1249)
T 3sfz_A 806 WSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR------ 879 (1249)
T ss_dssp BCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC------
T ss_pred ECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC------
Confidence 112677889999999999999999999 99999999998887776
Q ss_pred CCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCee-----------------------------EEE--------ee
Q psy12614 200 FSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ-----------------------------WSD--------VK 241 (708)
Q Consensus 200 ~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~-----------------------------~~~--------~~ 241 (708)
+|...|.+++|+|+|. +++++.||.|++||+.++.. +.. ..
T Consensus 880 -~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1249)
T 3sfz_A 880 -GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDY 958 (1249)
T ss_dssp -CCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEE
T ss_pred -CCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEE
Confidence 3488999999999995 99999999999999653100 000 01
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEc
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGG 319 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~ 319 (708)
.+...+.+++|+|+++++++|+.+|.|++|++.+ ++ ....+.+|...|.+++|+ ++++++++
T Consensus 959 ~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~--------~~--------~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 1022 (1249)
T 3sfz_A 959 LPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPN--------NR--------VFSSGVGHKKAVRHIQFTADGKTLISSS 1022 (1249)
T ss_dssp ECCSCEEEEEECTTSSEEEEEETTSCCEEEETTT--------TS--------CEEECCCCSSCCCCEEECSSSSCEEEEC
T ss_pred cccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCC--------Cc--------eeeecccCCCceEEEEECCCCCEEEEEc
Confidence 2356789999999999999999999999999998 65 456778999999999999 88999999
Q ss_pred CCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE
Q psy12614 320 LDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS 399 (708)
Q Consensus 320 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (708)
.|+.|++|++.++.......+......++++|++.+++.+.++.+++||+.++. .....
T Consensus 1023 ~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~---------------------~~~~~ 1081 (1249)
T 3sfz_A 1023 EDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGR---------------------IERDF 1081 (1249)
T ss_dssp SSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTC---------------------CCEEE
T ss_pred CCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCc---------------------eeEEE
Confidence 999999999999887766656667788999999998888999999999998866 23344
Q ss_pred ecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--E
Q psy12614 400 AVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--L 476 (708)
Q Consensus 400 ~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i 476 (708)
..|...|.+++|+|+|++++++. |++|++|++..... + ..+.+|.. .|++++|+|||++|++++.||. +
T Consensus 1082 ~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~---~---~~l~~h~~--~v~~~~~s~dg~~lat~~~dg~i~v 1153 (1249)
T 3sfz_A 1082 TCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP---L---HELKGHNG--CVRCSAFSLDGILLATGDDNGEIRI 1153 (1249)
T ss_dssp ECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSC---S---BCCCCCSS--CEEEEEECSSSSEEEEEETTSCCCE
T ss_pred cccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcce---e---eeeccCCC--cEEEEEECCCCCEEEEEeCCCEEEE
Confidence 57889999999999999999865 99999999986332 1 12566655 7888999999999999999998 9
Q ss_pred EEecCCCeEEEEEe------cCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCcee--eecCCCCCCceEEEEc
Q psy12614 477 YIIDLSSLEIKYCV------DPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHH--ASLPRYRKPSTAMAIH 548 (708)
Q Consensus 477 ~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~v~~l~~s 548 (708)
|++.++. .+..+ ....+| ...|++++|+|||++|++++ |.|++||+.+.. ..+..|...|++++|+
T Consensus 1154 wd~~~~~--~~~~~~~~~~~~~~~~~--~~~v~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s 1227 (1249)
T 3sfz_A 1154 WNVSDGQ--LLHSCAPISVEEGTATH--GGWVTDVCFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTNGTNLKKIHVS 1227 (1249)
T ss_dssp EESSSSC--CCCCCCCCC-------C--CSCCCEEEECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCSSCCCCCCEEC
T ss_pred EECCCCc--eEEEecccccccccccc--CceEEEEEECCCCCEEEECC--CeEEEEECCCCceeeeeeccCCcccEEEEC
Confidence 9998773 33222 112345 78899999999999999885 899999999544 3778899999999999
Q ss_pred CCCCEEEEEecCCcEEEEEcC
Q psy12614 549 PTLSTLVTVYSDHRIVEFDLN 569 (708)
Q Consensus 549 ~d~~~l~~~~~dg~i~vwd~~ 569 (708)
||+++|++++.||.|++|++.
T Consensus 1228 ~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1228 PDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp SSSCCEEEECTTCCEEEECCC
T ss_pred CCCCEEEEecCCcEEEEEeec
Confidence 999999999999999999975
No 10
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-51 Score=457.66 Aligned_cols=514 Identities=11% Similarity=0.061 Sum_probs=371.6
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
...||. ..|++++|+ +++||+|+.||+|++||..+.+....+ .|...|.+++|+| +++|++++.|+.|++||+.
T Consensus 12 ~~~gh~--~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 12 NKYGMS--SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEEECS--SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred cccCCC--CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 455888 999999999 899999999999999999988776654 4788999999999 8899999999999999999
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEec------ccCCCCCceeEEEEEEccC
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLD------KSSKFSKNTAVWCVAFCAD 214 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~v~~~~~~~~ 214 (708)
+++.. ..+. |.+.|.+++|+|++++|++|+.| .|++||+.+++.. .+... .... +|...|.+++|+|+
T Consensus 88 ~~~~~--~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~-~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 88 SQKVL--TTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPA-ARLSPIVSIQWNPR 162 (902)
T ss_dssp TCSEE--EEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCSS-SCCCCCCEEEEETT
T ss_pred CCcEE--EEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceeccccccccccc-cCCCCeEEEEEccC
Confidence 99876 4443 66889999999999999999999 9999999988763 22210 0011 44789999999997
Q ss_pred C--EEEEEcCCCcEEEEeCCCCeeEEEeecc------------------ccCeEEEEEeCCCCEEEEEecCCeEEEEEcc
Q psy12614 215 F--TIITGDSGGFVRFWDGKTGVQWSDVKTH------------------KKDILALTVSEDENYLYCAGVDPTVVCFQRT 274 (708)
Q Consensus 215 ~--~l~~~~~dg~i~~wd~~~~~~~~~~~~~------------------~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 274 (708)
+ .+++|+.||.| +||+++++.+..+..| ...|.+++|+|+|++|++++.||.|++||+.
T Consensus 163 ~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 163 DIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN 241 (902)
T ss_dssp EEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred CCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 4 58999999999 9999999988887755 4779999999999999999999999999998
Q ss_pred CCcccccCCCCCCCCcceEEeEE--E---e-------------ccccceEEEEEe-------CCEEEEEcCC-----CeE
Q psy12614 275 RKPQVCSTSGPEQGSSVWVRSVN--R---V-------------IHEGDVKSLALH-------GNRLYSGGLD-----SYL 324 (708)
Q Consensus 275 ~~~~~~~~~g~~~~~~~~~~~~~--~---~-------------~~~~~v~~l~~~-------~~~l~s~~~d-----~~i 324 (708)
+ ++ .... + . .|...|.+++|+ +.++++|+.| ..+
T Consensus 242 ~--------g~--------~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v 305 (902)
T 2oaj_A 242 S--------GH--------MIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSL 305 (902)
T ss_dssp T--------CC--------EEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCE
T ss_pred C--------Cc--------EEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceE
Confidence 8 54 2211 1 1 134579999995 1467777665 378
Q ss_pred EEEeCCC------------------Cc-eeecC-ccCCCCceEEEEc----------CCcE-EEEEcCCeEEEEEecCCC
Q psy12614 325 SLSYYPP------------------KT-LVKYP-CTLAQSTPVSLAK----------DIQH-VLLQYTSHLELWSLGSAQ 373 (708)
Q Consensus 325 ~iw~~~~------------------~~-~~~~~-~~~~~~~~~~~s~----------~~~~-l~~~~~~~i~i~~~~~~~ 373 (708)
.+|++.. .. .+.+. .+......+.+.+ +... ++.+.++.+++|++.++.
T Consensus 306 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~ 385 (902)
T 2oaj_A 306 TMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGI 385 (902)
T ss_dssp EEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCC
T ss_pred EEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCC
Confidence 8888521 11 11111 0122233444433 2334 444688999999986653
Q ss_pred C-CC-CCCCCCCCcccCCCCceEEEE---------------------EEecCCCceEEEEeCCCCcEEEEEc-CCceEEE
Q psy12614 374 S-TD-LSSHSNTTGVPLLSFPRLIVK---------------------MSAVNNATIRCSVVSNDGKYVAYST-ESCVRLH 429 (708)
Q Consensus 374 ~-~~-~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~ 429 (708)
. .. ...+ ..+ ........... ...+|...+.+++|+|+|++|+++. |++|++|
T Consensus 386 ~~~~~~~~~--~~l-~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlW 462 (902)
T 2oaj_A 386 FTDKASLFP--QNL-SWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIY 462 (902)
T ss_dssp EECCGGGSC--GGG-TTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEE
T ss_pred cccccccCC--Ccc-cccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEE
Confidence 1 00 0000 000 00001111111 1234556677789999999999955 9999999
Q ss_pred EEEecCCcc-eeEEeecC-----CcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCe----------E------
Q psy12614 430 SLDLDGDKP-QISRIKNL-----PAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSL----------E------ 485 (708)
Q Consensus 430 ~~~~~~~~~-~~~~~~~~-----~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~----------~------ 485 (708)
|+..+.... ....+. + .+|. ..|++++|+|||++||+++.||. ||++..+.. .
T Consensus 463 d~~~g~~~~~~~~~~~-l~~~~~~~h~--~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~ 539 (902)
T 2oaj_A 463 DASHGDIQDNASFEVN-LSRTLNKAKE--LAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFR 539 (902)
T ss_dssp ESSCCTTTTTBCEEEE-HHHHTTCSSS--CCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CC
T ss_pred ECCCccccCCceEEee-chhhcCCCCC--CceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeee
Confidence 998742110 001100 1 1343 37888999999999999999999 999976521 0
Q ss_pred ------------------------EEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceee-------e
Q psy12614 486 ------------------------IKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA-------S 534 (708)
Q Consensus 486 ------------------------~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-------~ 534 (708)
....+....+| ...|++++||||| +||+|+.|++|+|||+..... .
T Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h--~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~ 616 (902)
T 2oaj_A 540 RFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHAN--KGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIRE 616 (902)
T ss_dssp SCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCC--SCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG
T ss_pred eccccCCccccccccccCCCCCCCccceeEEEEcC--CCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhH
Confidence 01122333456 8899999999999 999999999999999984322 3
Q ss_pred cC-CCCCCceEEEEc-----CCC---CEEEEEecCCcEEEEEc---CCCCCCchhhhhhccCchhhhcC-----CCCeeE
Q psy12614 535 LP-RYRKPSTAMAIH-----PTL---STLVTVYSDHRIVEFDL---NRKAFTTFSRKLETNHPNEWLSR-----QLPVLG 597 (708)
Q Consensus 535 ~~-~~~~~v~~l~~s-----~d~---~~l~~~~~dg~i~vwd~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~ 597 (708)
+. +|.+.|++++|+ ||| ++|++++.|++|++||+ .+|++. ..+.+| .++|.+
T Consensus 617 ~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~-----------~~~~~~~~~~~~~~v~~ 685 (902)
T 2oaj_A 617 ISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFD-----------VQLMDITNVTSKGPIHK 685 (902)
T ss_dssp TCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEE-----------EEEEEEEECCSSCCCCE
T ss_pred hccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEE-----------EEecCceecCCCCceEE
Confidence 43 899999999999 886 89999999999999999 666644 233333 567877
Q ss_pred EE-eC----------------------CCCCceEEEEcCeeEEEEecCCCC
Q psy12614 598 IE-FD----------------------PQDSSLIYLMDDSALCVINKNKSL 625 (708)
Q Consensus 598 l~-~s----------------------~~~~~l~~~~~d~~i~~wd~~~~~ 625 (708)
++ |+ +++..| ++.+..|++|++....
T Consensus 686 i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l--~~~~~~ir~~~~~~~k 734 (902)
T 2oaj_A 686 IDAFSKETKSSCLATIPKMQNLSKGLCIPGIVL--ITGFDDIRLITLGKSK 734 (902)
T ss_dssp EEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEE--EECSSEEEEECTTCCC
T ss_pred EEeEecCCCCcccCCHHHHhccCCCCCCCeEEE--EEeccceEEEeCcccc
Confidence 77 65 344333 3337789999997643
No 11
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.9e-51 Score=461.98 Aligned_cols=473 Identities=11% Similarity=0.141 Sum_probs=383.7
Q ss_pred eeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 15 GVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 15 ~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
+++..+.+.+|++.|++++|+|++++||+|+.||.|+|||+.+++.+. .+.+|. .+|.+++|+ +++|++++.||.
T Consensus 2 ~l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~-~~~~~~--~~v~~~~~s~~~~~l~~~~~dg~ 78 (814)
T 3mkq_A 2 KLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVR-SIQVTE--TPVRAGKFIARKNWIIVGSDDFR 78 (814)
T ss_dssp CCCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-EEECCS--SCEEEEEEEGGGTEEEEEETTSE
T ss_pred CcccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEE-EEecCC--CcEEEEEEeCCCCEEEEEeCCCe
Confidence 455667889999999999999999999999999999999999988876 888999 999999999 999999999999
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC-CCCEEE
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS-SGDYLV 171 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~ 171 (708)
|++||+.+++.+..+.+|.+.|++++|+|++++|++++.||.|++||+.++... ...+.+|...|.+++|+| +++.|+
T Consensus 79 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~ 157 (814)
T 3mkq_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL-EQTFEGHEHFVMCVAFNPKDPSTFA 157 (814)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEE-EEEEECCSSCEEEEEEETTEEEEEE
T ss_pred EEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceE-EEEEcCCCCcEEEEEEEcCCCCEEE
Confidence 999999999999999999999999999999999999999999999999987332 167788999999999999 889999
Q ss_pred EecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc--CCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCe
Q psy12614 172 TGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA--DFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI 247 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i 247 (708)
+++.| .|++||+.++.....+...+ ...+.+++|+| ++. +++++.+|.|++||+.+++.+..+.+|...|
T Consensus 158 ~~~~dg~v~vwd~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v 231 (814)
T 3mkq_A 158 SGCLDRTVKVWSLGQSTPNFTLTTGQ------ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV 231 (814)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECCC------TTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred EEeCCCeEEEEECCCCcceeEEecCC------CCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence 99999 99999999888877776542 57899999999 774 9999999999999999999999999999999
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC-EEEEEcCCCeE
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN-RLYSGGLDSYL 324 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~-~l~s~~~d~~i 324 (708)
.+++|+|++++|++++.||.|++||+.+ ++ ....+..|...+.+++|+ +. .+++++.++.+
T Consensus 232 ~~~~~~~~~~~l~~~~~dg~v~vwd~~~--------~~--------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 295 (814)
T 3mkq_A 232 SFAVFHPTLPIIISGSEDGTLKIWNSST--------YK--------VEKTLNVGLERSWCIATHPTGRKNYIASGFDNGF 295 (814)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTT--------CS--------EEEEECCSSSSEEEEEECTTCGGGEEEEEETTEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCC--------Cc--------EEEEeecCCCcEEEEEEccCCCceEEEEEeCCCE
Confidence 9999999999999999999999999998 66 677888899999999999 33 24555567778
Q ss_pred EEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCC----eEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEe
Q psy12614 325 SLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTS----HLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSA 400 (708)
Q Consensus 325 ~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (708)
.+|++.. ....+.++|+++.++++... .+..-.+..... -..+. ..........
T Consensus 296 ~~~~~~~-----------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~~~ 353 (814)
T 3mkq_A 296 TVLSLGN-----------DEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEE----VEQDE-------PLSLQTKELG 353 (814)
T ss_dssp EEEECSC-----------CSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCC----CCSSS-------CBCCCCEEEC
T ss_pred EEEEcCC-----------CCceeEECCCCCEEEECcccccceeeeeeecccccc----cccCc-------cceeeeecCC
Confidence 8888743 34568889999988875222 121111111000 00000 0011112233
Q ss_pred cCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEE
Q psy12614 401 VNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYI 478 (708)
Q Consensus 401 ~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~ 478 (708)
.+...+.+++|+|+|++++++.++.+.+|++.. .... + ...+++++|+||++++++++.++. +|+
T Consensus 354 ~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~~----~~~~-------~--~~~i~~~~~spdg~~la~~~~~g~v~l~~ 420 (814)
T 3mkq_A 354 SVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALA----WRNK-------A--FGKCQDFVWGPDSNSYALIDETGQIKYYK 420 (814)
T ss_dssp CCSSCCSEEEECTTSSEEEEEETTEEEEEETTT----TEEE-------E--EEECSEEEECTTSSCEEEECTTCCEEEEE
T ss_pred CCccCCceeEECCCCCEEEEecCCEEEEEECcc----cccc-------C--CCceEEEEEeCCCCeEEEEeCCCcEEEEE
Confidence 456678999999999999998899999999642 1111 1 125666999999999999999998 553
Q ss_pred ecCCCeEEEEEecCCCCCccCcceEEEEECCCC---cEEEEEecCCeEEEEECCc--eeeecCCCCCCceEEEEcCCCCE
Q psy12614 479 IDLSSLEIKYCVDPYKSNLMSDVISLVQMSECK---QYIVCADRKSHVVIWKNGQ--HHASLPRYRKPSTAMAIHPTLST 553 (708)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~d~~i~iw~~~~--~~~~~~~~~~~v~~l~~s~d~~~ 553 (708)
...+| ...+.+++|+|++ .+|++++.|+.|++||+.+ ....+..|.. .++|+|||++
T Consensus 421 -------------~~~~~--~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~---~v~~s~dg~~ 482 (814)
T 3mkq_A 421 -------------NFKEV--TSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAK---DVIWSDNGEL 482 (814)
T ss_dssp -------------TTEEC--TTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESSCEE---EEEECTTSSE
T ss_pred -------------CCCCc--cceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEEecCCC---EEEEcCCCCE
Confidence 11233 5678889999998 6889999999999999984 3446666664 9999999999
Q ss_pred EEEE------ecCCcEEEE
Q psy12614 554 LVTV------YSDHRIVEF 566 (708)
Q Consensus 554 l~~~------~~dg~i~vw 566 (708)
|+++ +.++.+.+|
T Consensus 483 la~~~~~~~~~~~~~~~~~ 501 (814)
T 3mkq_A 483 VMIVNTNSNGDEASGYTLL 501 (814)
T ss_dssp EEEEECCCSSCSCSEEEEE
T ss_pred EEEEEcCcccCCceEEEEE
Confidence 9999 555544443
No 12
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.3e-48 Score=440.22 Aligned_cols=462 Identities=15% Similarity=0.164 Sum_probs=375.3
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI 140 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~ 140 (708)
+.+.+|. +.|.+++|+ +++|++++.||.|++||+.+++.+..+.+|.+.|.+++|+|++++|++++.||.|++||+
T Consensus 7 ~~~~~h~--~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 7 KTFSNRS--DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp EEEEEEC--SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eeeecCC--CceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 4889999 999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCc-eEEEEEecccCCCCCceeEEEEEEcc-CCE-
Q psy12614 141 SDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGH-AIHKMSLDKSSKFSKNTAVWCVAFCA-DFT- 216 (708)
Q Consensus 141 ~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~- 216 (708)
.+++.. ..+.+|.+.|.+++|+|++++|++++.| .|++||+.++. ....+. .+...|.+++|+| ++.
T Consensus 85 ~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-------~~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 85 NTGEKV--VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-------GHEHFVMCVAFNPKDPST 155 (814)
T ss_dssp TTCCEE--EEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE-------CCSSCEEEEEEETTEEEE
T ss_pred CCCcEE--EEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc-------CCCCcEEEEEEEcCCCCE
Confidence 999887 6788899999999999999999999999 99999999874 444443 3378899999999 664
Q ss_pred EEEEcCCCcEEEEeCCCCeeEEEeeccc-cCeEEEEEeC--CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE
Q psy12614 217 IITGDSGGFVRFWDGKTGVQWSDVKTHK-KDILALTVSE--DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293 (708)
Q Consensus 217 l~~~~~dg~i~~wd~~~~~~~~~~~~~~-~~i~~~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~ 293 (708)
+++++.||.|++||+.+++....+..+. ..+.+++|+| ++++|++++.||.|++||+.+ ++
T Consensus 156 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~--------~~-------- 219 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT--------KS-------- 219 (814)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT--------TE--------
T ss_pred EEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC--------Cc--------
Confidence 8999999999999999888777776554 8999999999 999999999999999999988 65
Q ss_pred EeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc-eeecCccCCCCceEEEEcCCc--EEEEEcCCeEEEEE
Q psy12614 294 RSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDIQ--HVLLQYTSHLELWS 368 (708)
Q Consensus 294 ~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~~--~l~~~~~~~i~i~~ 368 (708)
....+.+|...|.+++|+ +.++++++.||.|++||+.+.. ...+..+......++++|++. +++++.++.+.+|+
T Consensus 220 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (814)
T 3mkq_A 220 CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLS 299 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEE
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEE
Confidence 567788899999999999 7899999999999999999866 444444455678899999987 67788999999999
Q ss_pred ecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CC-ceEEEEEEec------CCccee
Q psy12614 369 LGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ES-CVRLHSLDLD------GDKPQI 440 (708)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~-~i~i~~~~~~------~~~~~~ 440 (708)
+.... ..++++|+|+.++++. +. ...++..... ......
T Consensus 300 ~~~~~---------------------------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (814)
T 3mkq_A 300 LGNDE---------------------------------PTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLS 346 (814)
T ss_dssp CSCCS---------------------------------CCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBC
T ss_pred cCCCC---------------------------------ceeEECCCCCEEEECcccccceeeeeeecccccccccCccce
Confidence 87643 2467889999998854 22 1222222110 000000
Q ss_pred EEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe
Q psy12614 441 SRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD 518 (708)
Q Consensus 441 ~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 518 (708)
.....+..+ ...+++++|+|+|+++++++ ++. +|++... .... ...+.+++|+|++++||+++
T Consensus 347 ~~~~~~~~~--~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~--~~~~----------~~~i~~~~~spdg~~la~~~ 411 (814)
T 3mkq_A 347 LQTKELGSV--DVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAW--RNKA----------FGKCQDFVWGPDSNSYALID 411 (814)
T ss_dssp CCCEEECCC--SSCCSEEEECTTSSEEEEEE-TTEEEEEETTTT--EEEE----------EEECSEEEECTTSSCEEEEC
T ss_pred eeeecCCCC--ccCCceeEECCCCCEEEEec-CCEEEEEECccc--cccC----------CCceEEEEEeCCCCeEEEEe
Confidence 000001222 22466799999999999988 566 7776543 1111 34678999999999999999
Q ss_pred cCCeEEEEECCceeeecCCCCCCceEEEEcCCC---CEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCe
Q psy12614 519 RKSHVVIWKNGQHHASLPRYRKPSTAMAIHPTL---STLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPV 595 (708)
Q Consensus 519 ~d~~i~iw~~~~~~~~~~~~~~~v~~l~~s~d~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i 595 (708)
.++.|++|+ .+.+|...+.+++|+|++ +.|++++.|+.|++||+.+++.. ..+..|..
T Consensus 412 ~~g~v~l~~------~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~-----------~~~~~~~~-- 472 (814)
T 3mkq_A 412 ETGQIKYYK------NFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLV-----------RRIDVNAK-- 472 (814)
T ss_dssp TTCCEEEEE------TTEECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEE-----------EEESSCEE--
T ss_pred CCCcEEEEE------CCCCccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEE-----------EEEecCCC--
Confidence 999999996 345677889999999998 68999999999999999988765 33444433
Q ss_pred eEEEeCCCCCceEEE------EcCeeEEEE
Q psy12614 596 LGIEFDPQDSSLIYL------MDDSALCVI 619 (708)
Q Consensus 596 ~~l~~s~~~~~l~~~------~~d~~i~~w 619 (708)
.++|+|||++|+++ +.+..+.+|
T Consensus 473 -~v~~s~dg~~la~~~~~~~~~~~~~~~~~ 501 (814)
T 3mkq_A 473 -DVIWSDNGELVMIVNTNSNGDEASGYTLL 501 (814)
T ss_dssp -EEEECTTSSEEEEEECCCSSCSCSEEEEE
T ss_pred -EEEEcCCCCEEEEEEcCcccCCceEEEEE
Confidence 89999999999999 555544444
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.8e-44 Score=368.41 Aligned_cols=282 Identities=13% Similarity=0.231 Sum_probs=264.3
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEE
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYD 97 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd 97 (708)
..+.+|.+.|++++|+|++++||+|+.||+|+|||+.+++... .+.+|. ..|.+++|+ +++|++|+.|++|++||
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~-~l~~h~--~~V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER-TLKGHT--DSVQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCE-EECCCS--SCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE-EEeccC--CcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 4577999999999999999999999999999999999998876 899999 999999999 89999999999999999
Q ss_pred CCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 98 MRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
+.+++++..+.+|...|.+++|+|++++|++|+.|+.|++||+.++... ..+.+|...|.++.|+|++++|++++.|
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~--~~~~~h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE--EEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE--EEEeCCCccEEEEEECCCCCEEEEEcCCC
Confidence 9999999999999999999999999999999999999999999999887 7788999999999999999999999999
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC--------------------C-EEEEEcCCCcEEEEeCCCCe
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD--------------------F-TIITGDSGGFVRFWDGKTGV 235 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~-~l~~~~~dg~i~~wd~~~~~ 235 (708)
.|++||+.+++....+. .|...|.+++|+|+ + .+++|+.|+.|++||+.+++
T Consensus 257 ~v~vwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~ 329 (410)
T 1vyh_C 257 TVRVWVVATKECKAELR-------EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329 (410)
T ss_dssp CEEEEETTTCCEEEEEC-------CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEECCCCceeeEec-------CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 99999999999888775 33888999999996 4 48999999999999999999
Q ss_pred eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC
Q psy12614 236 QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN 313 (708)
Q Consensus 236 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~ 313 (708)
++..+.+|...|.+++|+|++++|++++.||.|++||+.+ ++ ....+.+|...|.+++|+ +.
T Consensus 330 ~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~--------~~--------~~~~~~~h~~~v~~l~~~~~~~ 393 (410)
T 1vyh_C 330 CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN--------KR--------CMKTLNAHEHFVTSLDFHKTAP 393 (410)
T ss_dssp EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTT--------SC--------CCEEEECCSSCEEEEEECSSSS
T ss_pred eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--------Cc--------eEEEEcCCCCcEEEEEEcCCCC
Confidence 9999999999999999999999999999999999999988 65 567788999999999999 78
Q ss_pred EEEEEcCCCeEEEEeC
Q psy12614 314 RLYSGGLDSYLSLSYY 329 (708)
Q Consensus 314 ~l~s~~~d~~i~iw~~ 329 (708)
+|++|+.|+.|++|++
T Consensus 394 ~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 394 YVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CEEEEETTSEEEEEC-
T ss_pred EEEEEeCCCcEEEEeC
Confidence 9999999999999986
No 14
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-43 Score=349.79 Aligned_cols=285 Identities=18% Similarity=0.303 Sum_probs=261.1
Q ss_pred eeeccCCCCcEEEEEEcCC----CCEEEEEeCCCcEEEEeCCCCCe-EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCC
Q psy12614 19 IKFYAPEPKVINCIACEPK----SSRLAVSRADQSIEIWDISETPH-VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQG 91 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~----~~~la~~~~dg~v~iwd~~~~~~-~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~ 91 (708)
.+.+.+|.+.|.+++|+|+ +++||+|+.|++|+|||+.++.. ....+.+|. ..|.+++|+ +..+++++.|+
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~--~~v~~~~~~~~~~~l~s~s~D~ 102 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQ--LGVVSVDISHTLPIAASSSLDA 102 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCS--SCEEEEEECSSSSEEEEEETTS
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCC--CCEEEEEECCCCCEEEEEeCCC
Confidence 3557899999999999985 67999999999999999987654 234789999 999999999 88999999999
Q ss_pred cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEE
Q psy12614 92 FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLV 171 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 171 (708)
+|++||+.+++++..+..|...+.+++|+|++++|++++.|+.|++||+.+++.. ..+..|...|.+++|+|++++|+
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~--~~~~~~~~~v~~~~~spdg~~la 180 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE--YSLDTRGKFILSIAYSPDGKYLA 180 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE--EEEECSSSCEEEEEECTTSSEEE
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee--EEecCCCceEEEEEECCCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999887 56778888999999999999999
Q ss_pred EecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEE
Q psy12614 172 TGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILA 249 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~ 249 (708)
+++.| .|++||+.+++.+..+. .+...|.+++|+|+++ +++++.||.|++||+++++....+.+|...|.+
T Consensus 181 sg~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 253 (321)
T 3ow8_A 181 SGAIDGIINIFDIATGKLLHTLE-------GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLN 253 (321)
T ss_dssp EEETTSCEEEEETTTTEEEEEEC-------CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEcCCCeEEEEECCCCcEEEEEc-------ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEE
Confidence 99999 99999999999888775 3378899999999996 899999999999999999999999999999999
Q ss_pred EEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEE
Q psy12614 250 LTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLS 327 (708)
Q Consensus 250 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw 327 (708)
++|+|++++|++++.|+.|++||+.+ ++ ....+.+|...|.+++|+ +..|++++.|+.|++|
T Consensus 254 ~~~sp~~~~l~s~s~D~~v~iwd~~~--------~~--------~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vw 317 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSDKSVKVWDVGT--------RT--------CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 317 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTT--------TE--------EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCC--------CE--------EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 99999999999999999999999998 65 677888999999999999 7899999999999999
Q ss_pred eCC
Q psy12614 328 YYP 330 (708)
Q Consensus 328 ~~~ 330 (708)
|..
T Consensus 318 d~p 320 (321)
T 3ow8_A 318 DCP 320 (321)
T ss_dssp ECC
T ss_pred eCC
Confidence 973
No 15
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.5e-43 Score=345.05 Aligned_cols=290 Identities=12% Similarity=0.206 Sum_probs=258.2
Q ss_pred eeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 15 GVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 15 ~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
+++..+.+.+|.+.|++++|+|++++||+|+.||.|+|||+.++..+. .+.+|. .+|.+++|+ +++|++++.|++
T Consensus 2 ~l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~-~~~~~~--~~v~~~~~~~~~~~l~s~s~d~~ 78 (304)
T 2ynn_A 2 KLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVR-SIQVTE--TPVRAGKFIARKNWIIVGSDDFR 78 (304)
T ss_dssp CCCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-EEECCS--SCEEEEEEEGGGTEEEEEETTSE
T ss_pred cceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeE-EeeccC--CcEEEEEEeCCCCEEEEECCCCE
Confidence 345566789999999999999999999999999999999999988776 889999 999999999 999999999999
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC-CCCEEE
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS-SGDYLV 171 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~ 171 (708)
|++||+.+++++..+.+|.+.|.+++|+|++++|++|+.|++|++||++++.... ..+.+|...|.+++|+| ++.+|+
T Consensus 79 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~ 157 (304)
T 2ynn_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE-QTFEGHEHFVMCVAFNPKDPSTFA 157 (304)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEE-EEECCCCSCEEEEEECTTCTTEEE
T ss_pred EEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchh-hhhcccCCcEEEEEECCCCCCEEE
Confidence 9999999999999999999999999999999999999999999999999875432 67889999999999999 678999
Q ss_pred EecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc--CC-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCe
Q psy12614 172 TGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA--DF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDI 247 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i 247 (708)
+++.| .|++||+.++.....+... +...+..+.|.| ++ .+++++.|+.|++||+++++++..+.+|...|
T Consensus 158 sgs~D~~v~iwd~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v 231 (304)
T 2ynn_A 158 SGCLDRTVKVWSLGQSTPNFTLTTG------QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV 231 (304)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECC------CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred EEeCCCeEEEEECCCCCccceeccC------CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCE
Confidence 99999 9999999888877666543 267788999987 55 49999999999999999999999999999999
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC--EEEEEcCCCe
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN--RLYSGGLDSY 323 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~--~l~s~~~d~~ 323 (708)
.+++|+|++++|++++.||.|++||..+ ++ ....+..|...+.+++++ +. ++++|+.| .
T Consensus 232 ~~~~~~p~~~~l~s~s~Dg~i~iWd~~~--------~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g 294 (304)
T 2ynn_A 232 SFAVFHPTLPIIISGSEDGTLKIWNSST--------YK--------VEKTLNVGLERSWCIATHPTGRKNYIASGFDN-G 294 (304)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTT--------CC--------EEEEECCSSSSEEEEEECTTCGGGCEEEEETT-E
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCC--------Cc--------eeeeccCCCccEEEEEECCCCCceEEEEecCC-c
Confidence 9999999999999999999999999998 76 677888899999999987 32 46666655 4
Q ss_pred EEEEeCCC
Q psy12614 324 LSLSYYPP 331 (708)
Q Consensus 324 i~iw~~~~ 331 (708)
+.+|++.+
T Consensus 295 ~~~~~~~~ 302 (304)
T 2ynn_A 295 FTVLSLGN 302 (304)
T ss_dssp EEEEECC-
T ss_pred eEEEEecc
Confidence 66776643
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.8e-42 Score=344.52 Aligned_cols=287 Identities=15% Similarity=0.249 Sum_probs=261.0
Q ss_pred ceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC
Q psy12614 13 TYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ 90 (708)
Q Consensus 13 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d 90 (708)
....+..+.+.+|.+.|++++|+|++++||+|+.||.|+|||+.++..+. .+..|. ..|.+++|+ +++|++++.|
T Consensus 42 ~~~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~-~~~~~~--~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVH-AIPLRS--SWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CCCCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE-EEECSS--SCEEEEEECTTSSEEEEEETT
T ss_pred cccchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcce-EeecCC--ccEEEEEECCCCCEEEEEeCC
Confidence 34456677899999999999999999999999999999999999988876 889998 999999999 9999999999
Q ss_pred CcEEEEECCCC----eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC
Q psy12614 91 GFVNEYDMRRL----NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS 166 (708)
Q Consensus 91 ~~i~vwd~~~~----~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d 166 (708)
+.|++||+.++ +....+.+|.+.|.+++|++++. +++++.|+.|++||+.+++.. ..+.+|.+.|.+++|+|+
T Consensus 119 ~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~--~~~~~h~~~v~~~~~~~~ 195 (340)
T 1got_B 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQT--TTFTGHTGDVMSLSLAPD 195 (340)
T ss_dssp CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTT
T ss_pred CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEE--EEEcCCCCceEEEEECCC
Confidence 99999999875 45677889999999999999875 889999999999999999887 778899999999999999
Q ss_pred CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec--
Q psy12614 167 GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT-- 242 (708)
Q Consensus 167 ~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~-- 242 (708)
+++|++++.| .|++||+.++..+..+. .|...|.+++|+|++. +++++.||.|++||+++++.+..+..
T Consensus 196 ~~~l~sg~~d~~v~~wd~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~ 268 (340)
T 1got_B 196 TRLFVSGACDASAKLWDVREGMCRQTFT-------GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN 268 (340)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT
T ss_pred CCEEEEEeCCCcEEEEECCCCeeEEEEc-------CCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCC
Confidence 9999999999 99999999999888775 3488899999999995 99999999999999999988777653
Q ss_pred cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcC
Q psy12614 243 HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGL 320 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~ 320 (708)
+...|.+++|+|++++|++|+.|+.|++||..+ ++ ....+.+|...|.+++|+ +.+|++++.
T Consensus 269 ~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~--------~~--------~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 332 (340)
T 1got_B 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALK--------AD--------RAGVLAGHDNRVSCLGVTDDGMAVATGSW 332 (340)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSEEEEEETTT--------CC--------EEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred cccceEEEEECCCCCEEEEECCCCeEEEEEccc--------Cc--------EeeEeecCCCcEEEEEEcCCCCEEEEEcC
Confidence 335799999999999999999999999999988 65 677889999999999999 789999999
Q ss_pred CCeEEEEe
Q psy12614 321 DSYLSLSY 328 (708)
Q Consensus 321 d~~i~iw~ 328 (708)
|+.|++||
T Consensus 333 D~~i~iWd 340 (340)
T 1got_B 333 DSFLKIWN 340 (340)
T ss_dssp TSCEEEEC
T ss_pred CccEEecC
Confidence 99999996
No 17
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.8e-42 Score=342.74 Aligned_cols=283 Identities=13% Similarity=0.171 Sum_probs=239.5
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----------CCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCC
Q psy12614 23 APEPKVINCIACEPKSSRLAVSRADQSIEIWDISE-----------TPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQ 90 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~-----------~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d 90 (708)
..|+..|.+++|+|||++|++++ |+++++||... ..... ....+. ..|.+++|+ .+.|++++.|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~-~~~~~~--~~v~~~~~s~d~~l~~~s~d 102 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCS-AGVQTE--AGVADLTWVGERGILVASDS 102 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCS-EEEEES--SCEEEEEEETTTEEEEEETT
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceee-eeeccC--CCEEEEEEeCCCeEEEEECC
Confidence 45778899999999999999887 66888887321 11111 233345 789999999 8899999999
Q ss_pred CcEEEEECCCCeEeEE----EeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC
Q psy12614 91 GFVNEYDMRRLNIKSS----TAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS 166 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~----~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d 166 (708)
|+|++||+.+++.+.. +.+|.+.|++++|+|+|++|++|+.|+.|++||+.+++.+ ..+.+|.+.|.+++|+|+
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~--~~~~~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVL--SSYRAHAAQVTCVAASPH 180 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECSS
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE--EEEcCcCCceEEEEecCC
Confidence 9999999999875543 4489999999999999999999999999999999999887 789999999999999999
Q ss_pred CC-EEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-E-EEEEcCCCcEEEEeCCCCeeEEEeec
Q psy12614 167 GD-YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-T-IITGDSGGFVRFWDGKTGVQWSDVKT 242 (708)
Q Consensus 167 ~~-~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~~wd~~~~~~~~~~~~ 242 (708)
+. +|++++.| .|++||+++++....+... .+...+.+++|+|++ + +++|+.||.|++||+++++++..+.+
T Consensus 181 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~ 255 (344)
T 4gqb_B 181 KDSVFLSCSEDNRILLWDTRCPKPASQIGCS-----APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV 255 (344)
T ss_dssp CTTEEEEEETTSCEEEEETTSSSCEEECC---------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC
T ss_pred CCCceeeeccccccccccccccceeeeeecc-----eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC
Confidence 84 78999999 9999999999988877544 335678999999965 4 78899999999999999999999999
Q ss_pred cccCeEEEEEeCCC-CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--C-CEEEEE
Q psy12614 243 HKKDILALTVSEDE-NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--G-NRLYSG 318 (708)
Q Consensus 243 ~~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~-~~l~s~ 318 (708)
|...|.+++|+|++ ++|++++.|+.|++||+.+ ++ ...+.+|.+.|.+++|+ + .+|+++
T Consensus 256 h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~--------~~---------~~~~~~H~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 256 HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL--------SE---------LFRSQAHRDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC--------CE---------EEEECCCSSCEEEEEECSSSTTEEEEE
T ss_pred CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC--------Cc---------EEEEcCCCCCEEEEEEeCCCCeEEEEE
Confidence 99999999999998 5799999999999999988 63 45678999999999998 4 467899
Q ss_pred cCCCeEEEEeCCCCc
Q psy12614 319 GLDSYLSLSYYPPKT 333 (708)
Q Consensus 319 ~~d~~i~iw~~~~~~ 333 (708)
+.|++|++|++.+..
T Consensus 319 s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 319 GWDHQVVHHVVPTEP 333 (344)
T ss_dssp ETTSCEEEEECCC--
T ss_pred cCCCeEEEEECCCCC
Confidence 999999999997654
No 18
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.5e-41 Score=339.01 Aligned_cols=291 Identities=17% Similarity=0.262 Sum_probs=262.4
Q ss_pred CccceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEE
Q psy12614 10 TMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSG 87 (708)
Q Consensus 10 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~ 87 (708)
.+..+.++..+.+.+|.+.|++++|+|++++||+|+.||+|+|||..+++... .+..|. ..|.+++|+ +..|+++
T Consensus 48 ~~~~~~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~-~~~~~~--~~v~~~~~sp~g~~lasg 124 (354)
T 2pbi_B 48 ALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEH-AVTMPC--TWVMACAYAPSGCAIACG 124 (354)
T ss_dssp CCCCCCCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-EEECSS--SCCCEEEECTTSSEEEEE
T ss_pred cccccccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcce-EEecCC--CCEEEEEECCCCCEEEEe
Confidence 34555567778899999999999999999999999999999999999988776 788888 899999999 9999999
Q ss_pred cCCCcEEEEECCCC------eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEE
Q psy12614 88 GLQGFVNEYDMRRL------NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCT 161 (708)
Q Consensus 88 ~~d~~i~vwd~~~~------~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 161 (708)
+.|+.+++|++... .....+.+|.+.|.+++|+|++..|++++.|++|++||+++++.. ..+.+|...|.++
T Consensus 125 ~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~--~~~~~h~~~v~~~ 202 (354)
T 2pbi_B 125 GLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL--QSFHGHGADVLCL 202 (354)
T ss_dssp STTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE--EEEECCSSCEEEE
T ss_pred eCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE--EEEcCCCCCeEEE
Confidence 99999999998653 345677899999999999999999999999999999999999887 7888999999999
Q ss_pred EECC--CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeE
Q psy12614 162 AWHS--SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQW 237 (708)
Q Consensus 162 ~~s~--d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~ 237 (708)
+|+| ++++|++++.| .|++||+++++.+..+. .|...|.+++|+|++. +++++.|+.|++||+++++.+
T Consensus 203 ~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 203 DLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE-------THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV 275 (354)
T ss_dssp EECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec-------CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 9987 57899999999 99999999999888775 3488999999999995 999999999999999998877
Q ss_pred EEeecc--ccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC
Q psy12614 238 SDVKTH--KKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN 313 (708)
Q Consensus 238 ~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~ 313 (708)
..+..+ ...+.+++|+|++++|++++.|+.|++||+.+ ++ ....+.+|...|.+++|+ +.
T Consensus 276 ~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~--------~~--------~~~~l~~h~~~v~~l~~spdg~ 339 (354)
T 2pbi_B 276 AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK--------GS--------RVSILFGHENRVSTLRVSPDGT 339 (354)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTT--------CS--------EEEEECCCSSCEEEEEECTTSS
T ss_pred EEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCC--------Cc--------eEEEEECCCCcEEEEEECCCCC
Confidence 766533 35789999999999999999999999999988 65 667788999999999999 88
Q ss_pred EEEEEcCCCeEEEEe
Q psy12614 314 RLYSGGLDSYLSLSY 328 (708)
Q Consensus 314 ~l~s~~~d~~i~iw~ 328 (708)
+|++++.|+.|++|+
T Consensus 340 ~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 340 AFCSGSWDHTLRVWA 354 (354)
T ss_dssp CEEEEETTSEEEEEC
T ss_pred EEEEEcCCCCEEecC
Confidence 999999999999996
No 19
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.2e-41 Score=335.30 Aligned_cols=303 Identities=15% Similarity=0.225 Sum_probs=251.8
Q ss_pred eeeeeeccCCCC-cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEE--EEEecCCCCCcEEEEEEe--CCEEEEEcCC
Q psy12614 16 VHNIKFYAPEPK-VINCIACEPKSSRLAVSRADQSIEIWDISETPHVD--RVFIGDPLSNSIECLTWF--NDRLFSGGLQ 90 (708)
Q Consensus 16 ~~~~~~~~~h~~-~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~--~~~~~h~~~~~v~~l~~~--~~~l~s~~~d 90 (708)
+..+..+.+|++ .|.+++|+|+|++||+|+.||.|+|||+.++.... ....+|. ..|.+++|+ +++|++++.|
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~--~~v~~~~~sp~g~~l~s~s~D 82 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQ--RTVRKVAWSPCGNYLASASFD 82 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCS--SCEEEEEECTTSSEEEEEETT
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccC--CcEEEEEECCCCCEEEEEECC
Confidence 345667889988 99999999999999999999999999999876432 2346898 999999999 8999999999
Q ss_pred CcEEEEECCCC--eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE-EEEEecccccccEEEEEECCCC
Q psy12614 91 GFVNEYDMRRL--NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL-LYEKLLDRQQGRILCTAWHSSG 167 (708)
Q Consensus 91 ~~i~vwd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~s~d~ 167 (708)
++|++||+.++ +++..+.+|...|.+++|+|++++|++++.|+.|++||+.++.. .....+.+|...|.+++|+|++
T Consensus 83 ~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS
T ss_pred CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC
Confidence 99999998876 46788899999999999999999999999999999999987642 2236788899999999999999
Q ss_pred CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCC-----------
Q psy12614 168 DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG----------- 234 (708)
Q Consensus 168 ~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~----------- 234 (708)
++|++++.| .|++||..+++........ +|...|++++|+|+|+ |++++.|+.|++||....
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~~~~~~~~~-----~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~ 237 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDDWVCCATLE-----GHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGS 237 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC--
T ss_pred CEEEEEeCCCcEEEEEecCCCEEEEEEec-----CCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeecc
Confidence 999999999 9999999887654333332 4588999999999995 999999999999996321
Q ss_pred ----eeEEEeec-cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE-EeEEEeccccceEEE
Q psy12614 235 ----VQWSDVKT-HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV-RSVNRVIHEGDVKSL 308 (708)
Q Consensus 235 ----~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~v~~l 308 (708)
+++..+.+ |...|.+++|+|++..|++++.|+.|++|+... +.....+... ......+|...|.++
T Consensus 238 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~--------~~~~~~~~~~~~~~~~~~h~~~V~~v 309 (345)
T 3fm0_A 238 DPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDP--------NSDPQQPTFSLTAHLHQAHSQDVNCV 309 (345)
T ss_dssp -CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECT--------TSCTTSCCEEEEEEETTSSSSCEEEE
T ss_pred CCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCC--------CCCcceeeEEEEeeecccccCcEeEe
Confidence 23444444 888999999999999999999999999999876 3211112221 223345899999999
Q ss_pred EEe--C-CEEEEEcCCCeEEEEeCCCCc
Q psy12614 309 ALH--G-NRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 309 ~~~--~-~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+|+ + .+|++++.||.|++|++.+..
T Consensus 310 ~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 310 AWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp EECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred EEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 999 3 599999999999999998765
No 20
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.3e-41 Score=344.03 Aligned_cols=280 Identities=15% Similarity=0.236 Sum_probs=255.6
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
.+.+|. .+|++++|+ +.+|++|+.||+|++||+.+++....+.+|.+.|.+++|+|++++|++|+.|++|++||+.
T Consensus 103 ~l~gh~--~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 103 ALSGHR--SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp EEECCS--SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eecccC--CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 788999 999999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEE
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IIT 219 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~ 219 (708)
+++.. ..+.+|...|.+++|+|++++|++++.| .|++||+.++..+..+.. |...|.+++|+|++. +++
T Consensus 181 ~~~~~--~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~-------h~~~v~~~~~~~~g~~l~s 251 (410)
T 1vyh_C 181 GFECI--RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-------HREWVRMVRPNQDGTLIAS 251 (410)
T ss_dssp SSCEE--ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-------CSSCEEEEEECTTSSEEEE
T ss_pred CCcee--EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC-------CCccEEEEEECCCCCEEEE
Confidence 98887 7889999999999999999999999999 999999999999888763 388899999999996 889
Q ss_pred EcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC--------------------CCEEEEEecCCeEEEEEccCCccc
Q psy12614 220 GDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED--------------------ENYLYCAGVDPTVVCFQRTRKPQV 279 (708)
Q Consensus 220 ~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~--------------------~~~l~~~~~dg~i~iw~~~~~~~~ 279 (708)
++.||.|++||+.+++....+.+|...|.+++|+|+ +.+|++|+.|+.|++||+.+
T Consensus 252 ~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~---- 327 (410)
T 1vyh_C 252 CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST---- 327 (410)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT----
T ss_pred EcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC----
Confidence 999999999999999999999999999999999996 67899999999999999998
Q ss_pred ccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEE
Q psy12614 280 CSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVL 357 (708)
Q Consensus 280 ~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 357 (708)
+. ....+.+|...|.+++|+ +.+|++++.|+.|++||+.+..
T Consensus 328 ----~~--------~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~------------------------ 371 (410)
T 1vyh_C 328 ----GM--------CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR------------------------ 371 (410)
T ss_dssp ----TE--------EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC------------------------
T ss_pred ----Cc--------eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc------------------------
Confidence 65 677888999999999999 8899999999999999885432
Q ss_pred EEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEE
Q psy12614 358 LQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSL 431 (708)
Q Consensus 358 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~ 431 (708)
.......|...|++++|+|++.+|+++. |++|++|++
T Consensus 372 -------------------------------------~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 372 -------------------------------------CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp -------------------------------------CCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred -------------------------------------eEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 1122246788899999999999999855 999999986
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.4e-40 Score=327.05 Aligned_cols=285 Identities=18% Similarity=0.268 Sum_probs=258.7
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
...+.+|.+.|++++|+|++++||+|+.||.|+|||..+++... .+.+|. ..|.+++|+ +++|++++.|+.|++|
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~-~~~~h~--~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-TISGHK--LGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-EECCCS--SCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccch-hhccCC--CceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 44678999999999999999999999999999999999988776 889999 999999999 8999999999999999
Q ss_pred ECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 97 DMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
|+.+++++..+.+|...|.+++|+|++++|++++.|+.|++||+.+++.. ..+..|...|.+++|+|++++|++++.|
T Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 93 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL--KTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE--EEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEE--EEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999998876 6788899999999999999999999999
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEE--EEE
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILA--LTV 252 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~--~~~ 252 (708)
.|++||+.+++.+..+... +...+..++|+|+++ +++++.||.|++||+.+++.+..+.+|...+.+ ..+
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 244 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDD------DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 244 (312)
T ss_dssp SCEEEEETTTCCEEEEECCS------SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEE
T ss_pred CcEEEEECCCCceeeEEecc------CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEE
Confidence 9999999999888776543 267899999999995 899999999999999999999998888765432 233
Q ss_pred -eCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEc--CCCeEEEE
Q psy12614 253 -SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGG--LDSYLSLS 327 (708)
Q Consensus 253 -s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~--~d~~i~iw 327 (708)
.+++++|++++.||.|++||+.+ ++ ....+.+|...|.+++|+ +..+++++ .|+.|++|
T Consensus 245 ~~~~~~~l~sg~~dg~i~vwd~~~--------~~--------~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W 308 (312)
T 4ery_A 245 SVTGGKWIVSGSEDNLVYIWNLQT--------KE--------IVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 308 (312)
T ss_dssp ECSSSCEEEECCTTSCEEEEETTT--------CC--------EEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEE
T ss_pred EeCCCcEEEEECCCCEEEEEECCC--------ch--------hhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEe
Confidence 46789999999999999999998 66 677889999999999999 88899886 69999999
Q ss_pred eCC
Q psy12614 328 YYP 330 (708)
Q Consensus 328 ~~~ 330 (708)
+.+
T Consensus 309 ~~d 311 (312)
T 4ery_A 309 KSD 311 (312)
T ss_dssp ECC
T ss_pred cCC
Confidence 864
No 22
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=328.12 Aligned_cols=282 Identities=16% Similarity=0.218 Sum_probs=252.1
Q ss_pred EEEecCCCCCcEEEEEEe------CCEEEEEcCCCcEEEEECCCCeE--eEEEeecCCceEEEEEecCCCEEEEEeCCCc
Q psy12614 63 RVFIGDPLSNSIECLTWF------NDRLFSGGLQGFVNEYDMRRLNI--KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGH 134 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~------~~~l~s~~~d~~i~vwd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~ 134 (708)
+.+.+|. +.|.+++|+ +.+|++|+.|++|++||+.+++. ...+.+|...|.+++|++++.++++++.|+.
T Consensus 26 ~~~~~H~--~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~ 103 (321)
T 3ow8_A 26 KQEQAHD--DAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 103 (321)
T ss_dssp EETTSSS--SCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred eecccCC--CcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 3667899 999999997 45899999999999999987764 4568899999999999999999999999999
Q ss_pred EEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 135 INLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 135 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
|++||+.+++.. ..+..+...+.+++|+|++++|++++.+ .|++||+++++....+... ...+.+++|+|
T Consensus 104 i~lWd~~~~~~~--~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~-------~~~v~~~~~sp 174 (321)
T 3ow8_A 104 IRLWDLENGKQI--KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTR-------GKFILSIAYSP 174 (321)
T ss_dssp EEEEETTTTEEE--EEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECS-------SSCEEEEEECT
T ss_pred EEEEECCCCCEE--EEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCC-------CceEEEEEECC
Confidence 999999999887 6777888889999999999999999999 9999999999988877643 77899999999
Q ss_pred CCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcce
Q psy12614 214 DFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW 292 (708)
Q Consensus 214 ~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~ 292 (708)
+++ +++++.||.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.. ++
T Consensus 175 dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~--------~~------- 239 (321)
T 3ow8_A 175 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH--------AN------- 239 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT--------CC-------
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC--------cc-------
Confidence 996 89999999999999999999999999999999999999999999999999999999988 65
Q ss_pred EEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEec
Q psy12614 293 VRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370 (708)
Q Consensus 293 ~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~ 370 (708)
....+.+|...|.+++|+ +.+|++++.|+.|++||+.+..
T Consensus 240 -~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~------------------------------------- 281 (321)
T 3ow8_A 240 -LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT------------------------------------- 281 (321)
T ss_dssp -EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-------------------------------------
T ss_pred -eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE-------------------------------------
Confidence 667888999999999999 8899999999999999986542
Q ss_pred CCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEE
Q psy12614 371 SAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLD 432 (708)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~ 432 (708)
......+|...|.+++|+|+|++|++ +.|+.|++||..
T Consensus 282 ------------------------~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 282 ------------------------CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ------------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred ------------------------EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 23333467888999999999999998 459999999863
No 23
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.5e-41 Score=340.92 Aligned_cols=285 Identities=15% Similarity=0.189 Sum_probs=239.9
Q ss_pred ccCCCCcEEEEEEcCCCCEEEEEeC------CCcEEEEeCCCCCeE---EEEEecCCCCCcEEEEEEe-CCEEEEEcCCC
Q psy12614 22 YAPEPKVINCIACEPKSSRLAVSRA------DQSIEIWDISETPHV---DRVFIGDPLSNSIECLTWF-NDRLFSGGLQG 91 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~~la~~~~------dg~v~iwd~~~~~~~---~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~ 91 (708)
...|.+.|++++|||||++||+|+. ||.|++|+..++... .....+|. ..|.+++|+ .+.+++++.||
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~--~~V~~~~~s~d~~~l~~s~dg 115 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTE--AGVTDVAWVSEKGILVASDSG 115 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECS--SCEEEEEEETTTEEEEEETTS
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCC--CCEEEEEEcCCCCEEEEECCC
Confidence 4579999999999999999999997 778999998775432 22456788 899999999 77888899999
Q ss_pred cEEEEECCCCeEeE----EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC
Q psy12614 92 FVNEYDMRRLNIKS----STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG 167 (708)
Q Consensus 92 ~i~vwd~~~~~~~~----~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~ 167 (708)
+|++||+.+++... ...+|.+.|++++|+|++++|++|+.|+.|++||+.+++.. ..+.+|...|.+++|+|++
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~--~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVL--KSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTTC
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE--EEEcCCCCCEEEEEEccCC
Confidence 99999999887543 34479999999999999999999999999999999999887 7888999999999999998
Q ss_pred C-EEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEeecc
Q psy12614 168 D-YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDVKTH 243 (708)
Q Consensus 168 ~-~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 243 (708)
. ++++++.| .|++||+++++....+... .+...+.+++|+|++ .+++|+.|+.|++||+++++.+..+.+|
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~-----~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~ 268 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPATRIDFC-----ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVH 268 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCBCBCCCT-----TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCC
T ss_pred CceeeeeccCCceEEEECCCCceeeeeeec-----cccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecc
Confidence 5 78899999 9999999998877665543 347789999999986 3788999999999999999999999999
Q ss_pred ccCeEEEEEeCCC-CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEc
Q psy12614 244 KKDILALTVSEDE-NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGG 319 (708)
Q Consensus 244 ~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~ 319 (708)
...|.+++|+|++ ++|++++.|+.|++||+.+ ++ .....+|.+.|++++|+ +.+|++++
T Consensus 269 ~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~--------~~---------~~~~~~H~~~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 269 SQNITGLAYSYHSSPFLASISEDCTVAVLDADF--------SE---------VFRDLSHRDFVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTS--------CE---------EEEECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC--------Cc---------EeEECCCCCCEEEEEEeCCCCCEEEEEc
Confidence 9999999999987 5789999999999999988 63 34456899999999997 67999999
Q ss_pred CCCeEEEEeCCCC
Q psy12614 320 LDSYLSLSYYPPK 332 (708)
Q Consensus 320 ~d~~i~iw~~~~~ 332 (708)
.|+.|++|++...
T Consensus 332 ~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 332 WDHKVLHHHLPSE 344 (357)
T ss_dssp TTSCEEEEECC--
T ss_pred CCCeEEEEECCCC
Confidence 9999999999653
No 24
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.8e-40 Score=323.42 Aligned_cols=286 Identities=13% Similarity=0.178 Sum_probs=248.4
Q ss_pred eeeeeeccCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCC----eEEEEEecCCCCCcEEEEEEe--CCEEEEEc
Q psy12614 16 VHNIKFYAPEPKVINCIACEPKS-SRLAVSRADQSIEIWDISETP----HVDRVFIGDPLSNSIECLTWF--NDRLFSGG 88 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~~-~~la~~~~dg~v~iwd~~~~~----~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~ 88 (708)
+.....+.+|.+.|++++|+|++ ++|++|+.|++|++||+.... .....+.+|. ..|.+++|+ +++|++++
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~--~~v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHS--HIVQDCTLTADGAYALSAS 84 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCS--SCEEEEEECTTSSEEEEEE
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCc--ccEEEEEECCCCCEEEEEe
Confidence 33445789999999999999965 899999999999999987532 1224789999 999999999 89999999
Q ss_pred CCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC--
Q psy12614 89 LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS-- 166 (708)
Q Consensus 89 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d-- 166 (708)
.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.|+.|++||+..... ..+.+|...|.++.|+|.
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~---~~~~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCL---ATLLGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEE---EEECCCSSCEEEEEECCC--
T ss_pred CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeE---EEEeccCCcEEEEEEccCCC
Confidence 999999999999999999999999999999999999999999999999999976543 678899999999999985
Q ss_pred ----CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEe
Q psy12614 167 ----GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 167 ----~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~ 240 (708)
+..|++++.| .|++||+.+++....+. +|...|.+++|+|+++ +++++.||.|++||+.+++.+..+
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-------~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-------GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETTTTEEEEEEC-------CCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred CCCCccEEEEEeCCCEEEEEECCcchhheeec-------CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 4589999999 99999999988777665 3488999999999995 899999999999999999999888
Q ss_pred eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE--------eccccceEEEEEe-
Q psy12614 241 KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR--------VIHEGDVKSLALH- 311 (708)
Q Consensus 241 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~~~v~~l~~~- 311 (708)
.. ...|.+++|+|++.+|++++. +.+++|++.. +. ....+ ..|...+.+++|+
T Consensus 235 ~~-~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~--------~~--------~~~~~~~~~~~~~~~~~~~v~~~~~sp 296 (319)
T 3frx_A 235 SA-QDEVFSLAFSPNRYWLAAATA-TGIKVFSLDP--------QY--------LVDDLRPEFAGYSKAAEPHAVSLAWSA 296 (319)
T ss_dssp EC-CSCEEEEEECSSSSEEEEEET-TEEEEEEETT--------EE--------EEEEECCCCTTCCGGGCCCEEEEEECT
T ss_pred cC-CCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCc--------Ce--------eeeccCccccccccCcCcceeEEEECC
Confidence 75 478999999999999988875 5699999987 21 12222 2356678999999
Q ss_pred -CCEEEEEcCCCeEEEEeCCC
Q psy12614 312 -GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 312 -~~~l~s~~~d~~i~iw~~~~ 331 (708)
+++|++++.|+.|++|++.+
T Consensus 297 dg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 297 DGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp TSSEEEEEETTSCEEEEEEEE
T ss_pred CCCEEEEeecCceEEEEEEee
Confidence 89999999999999999854
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.5e-41 Score=341.22 Aligned_cols=290 Identities=14% Similarity=0.254 Sum_probs=254.0
Q ss_pred eeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 15 GVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 15 ~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
....++.+.+|.+.|++++|+|++++||+|+.||+|+|||+.+++... .+.+|. ..|.+++|+ +++|++++.|+.
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~-~~~~h~--~~v~~~~~s~~g~~las~~~d~~ 131 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTH-AIKLHC--PWVMECAFAPNGQSVACGGLDSA 131 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE-EEECCC--TTCCCCEECTTSSEEEECCSSSC
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccce-EEecCC--CCEEEEEECCCCCEEEEeeCCCc
Confidence 455667899999999999999999999999999999999999988776 899999 999999999 999999999999
Q ss_pred EEEEECCCCe-------EeEEEeecCCceEEEEEecCC-CEEEEEeCCCcEEEEEccCCcEEEEEec-----ccccccEE
Q psy12614 93 VNEYDMRRLN-------IKSSTAVTSGTCWCLSVHKKK-RLLAAGTEQGHINLFQISDEGLLYEKLL-----DRQQGRIL 159 (708)
Q Consensus 93 i~vwd~~~~~-------~~~~~~~~~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~v~ 159 (708)
|++||+.+.. ....+.+|.+.|.+++|+|++ ..|++|+.|++|++||+.+++.. ..+ .+|...|.
T Consensus 132 v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~--~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 132 CSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRI--SIFGSEFPSGHTADVL 209 (380)
T ss_dssp CEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEE--EEECCCSSSSCCSCEE
T ss_pred EEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEE--EEeecccCCCCccCeE
Confidence 9999987532 345678999999999999974 57999999999999999999876 333 57889999
Q ss_pred EEEECC-CCCEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCe
Q psy12614 160 CTAWHS-SGDYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGV 235 (708)
Q Consensus 160 ~~~~s~-d~~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~ 235 (708)
+++|++ ++++|++++.| .|++||++. ++.+..+. +|...|.+++|+|++. +++++.||.|++||+++++
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH-------GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC-------CCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC-------CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc
Confidence 999977 88999999999 999999974 45555554 4488999999999995 9999999999999999999
Q ss_pred eEEEeeccc-------cCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE----eccccc
Q psy12614 236 QWSDVKTHK-------KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR----VIHEGD 304 (708)
Q Consensus 236 ~~~~~~~~~-------~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~ 304 (708)
.+..+..+. ..|.+++|+|+|++|++|+.||.|++||... ++ ....+ .+|.+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~--------~~--------~~~~~~~~~~~h~~~ 346 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLL--------AE--------MVLNLGTLQNSHEGR 346 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTT--------CC--------EEEEECCSCSSCCCC
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCC--------Cc--------eEEEEecccCCCCCc
Confidence 888776443 2489999999999999999999999999987 54 33333 679999
Q ss_pred eEEEEEe--CCEEEEEcCCCeEEEEeCCCC
Q psy12614 305 VKSLALH--GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 305 v~~l~~~--~~~l~s~~~d~~i~iw~~~~~ 332 (708)
|.+++|+ +.+|++|+.|+.|++|++...
T Consensus 347 v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 347 ISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp CCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred eEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 9999999 899999999999999998754
No 26
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-39 Score=331.62 Aligned_cols=287 Identities=17% Similarity=0.302 Sum_probs=246.8
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCC----------------CCcEEEEEEe--CCEEE
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL----------------SNSIECLTWF--NDRLF 85 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~----------------~~~v~~l~~~--~~~l~ 85 (708)
+|.+.|+|++|+|||++||+|+ ++.++||++.+++.+. .+.+|.. ...|.+++|+ +++|+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVA-RLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEE-EECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEE-EecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 6999999999999999999986 6899999999998776 5655430 1249999999 89999
Q ss_pred EEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC
Q psy12614 86 SGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 86 s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
+++.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++.. ..+. +...+.+++|+|
T Consensus 140 s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~--~~~~-~~~~v~~~~~~~ 216 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS--LTLS-IEDGVTTVAVSP 216 (393)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--EEEE-CSSCEEEEEECS
T ss_pred EEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE--EEEE-cCCCcEEEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999876 3333 567799999999
Q ss_pred -CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCC--------
Q psy12614 166 -SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG-------- 234 (708)
Q Consensus 166 -d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~-------- 234 (708)
++++|++++.| .|++||+.+++.+..+........+|...|.+++|+|+++ +++++.||.|++||+++.
T Consensus 217 ~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 217 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 89999999999 9999999999888776432110014488999999999995 999999999999998753
Q ss_pred ----eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEE
Q psy12614 235 ----VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310 (708)
Q Consensus 235 ----~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~ 310 (708)
.+...+.+|...|.+++|+|++++|++++.|+.|++||..+ ++ ....+.+|...|.++++
T Consensus 297 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~--------~~--------~~~~l~~h~~~v~~v~~ 360 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS--------GN--------PLLMLQGHRNSVISVAV 360 (393)
T ss_dssp ----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTT--------CC--------EEEEEECCSSCEEEEEE
T ss_pred CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCC--------Ce--------EEEEECCCCCCEEEEEe
Confidence 34566788999999999999999999999999999999998 76 67788999999999998
Q ss_pred e--------CCEEEEEcCCCeEEEEeCCC
Q psy12614 311 H--------GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 311 ~--------~~~l~s~~~d~~i~iw~~~~ 331 (708)
+ +++|++++.|+.|++|++..
T Consensus 361 ~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 361 ANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred cCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 7 36899999999999999753
No 27
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.4e-39 Score=325.54 Aligned_cols=298 Identities=14% Similarity=0.189 Sum_probs=242.7
Q ss_pred eeeeeeeeccCCCCcEEEEEE-----cC-CCCEEEEEeCCCcEEEEeCCCCC------eEEEEEecCCCCCcEEEEEEe-
Q psy12614 14 YGVHNIKFYAPEPKVINCIAC-----EP-KSSRLAVSRADQSIEIWDISETP------HVDRVFIGDPLSNSIECLTWF- 80 (708)
Q Consensus 14 ~~~~~~~~~~~h~~~v~~~~~-----s~-~~~~la~~~~dg~v~iwd~~~~~------~~~~~~~~h~~~~~v~~l~~~- 80 (708)
........+.+|.+.|++++| ++ ++++||+|+.|++|+|||+.+++ .....+.+|. ..|.+++|+
T Consensus 9 ~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~--~~V~~~~~~~ 86 (343)
T 2xzm_R 9 IQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHN--HFVSDLALSQ 86 (343)
T ss_dssp EEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCS--SCEEEEEECS
T ss_pred eEeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCC--CceEEEEECC
Confidence 345556789999999999999 77 99999999999999999997642 2334789999 999999999
Q ss_pred -CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEE
Q psy12614 81 -NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRIL 159 (708)
Q Consensus 81 -~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 159 (708)
+.+|++++.|++|++||+.+++++..+.+|...|.+++|+|++++|++++.|+.|++||+.............|...|.
T Consensus 87 ~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 87 ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVS 166 (343)
T ss_dssp STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceee
Confidence 8899999999999999999999999999999999999999999999999999999999998554432122347889999
Q ss_pred EEEECCCC----------CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEE
Q psy12614 160 CTAWHSSG----------DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVR 227 (708)
Q Consensus 160 ~~~~s~d~----------~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~ 227 (708)
+++|+|++ .+|++++.| .|++||. +++....+. .|...|.+++|+|+|+ +++++.||.|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~-------~h~~~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFK-------AHESNVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEE-------CCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEc-------CccccceEEEECCCCCEEEEEcCCCeEE
Confidence 99999987 799999999 9999994 455555554 3478899999999995 99999999999
Q ss_pred EEeCCC-CeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE-----EeEEEecc
Q psy12614 228 FWDGKT-GVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV-----RSVNRVIH 301 (708)
Q Consensus 228 ~wd~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~ 301 (708)
+||+.. ......+. +...|.+++|+|++++++++ .|+.|++|++.+ ++........ ......+|
T Consensus 239 iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 308 (343)
T 2xzm_R 239 IWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMT--------QSKAPVCTIEAEPITKAEGQKGK 308 (343)
T ss_dssp EEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSS--------CCSCSEEECCCCSGGGBTTBCCS
T ss_pred EEECCCCcccceeec-CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCC--------CCCCceEEeecCcchhhhhhcCC
Confidence 999944 44444443 55679999999999877654 588899999987 3200000000 00012368
Q ss_pred ccceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 302 EGDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
...|.+++|+ +.+|++|+.||.|++|++.+
T Consensus 309 ~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 309 NPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp CCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred CCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 8889999999 89999999999999999854
No 28
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.7e-39 Score=321.88 Aligned_cols=284 Identities=17% Similarity=0.312 Sum_probs=249.9
Q ss_pred CeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEE
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVR 179 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~ 179 (708)
.+...++.+|.+.|++++|+|++++|++|+.||.|++||+.+++.. ..+..|...|.+++|+|++++|++++.| .|+
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~ 122 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKV--HAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE--EEEECSSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcc--eEeecCCccEEEEEECCCCCEEEEEeCCCeEE
Confidence 3567788999999999999999999999999999999999998877 6778899999999999999999999999 999
Q ss_pred EEEcCCCce----EEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC
Q psy12614 180 VWDIHKGHA----IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED 255 (708)
Q Consensus 180 iwd~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~ 255 (708)
+|++.++.. ...+. +|...+.++.|++++.+++++.|+.|++||+++++.+..+.+|...|.+++|+|+
T Consensus 123 iw~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 195 (340)
T 1got_B 123 IYNLKTREGNVRVSRELA-------GHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195 (340)
T ss_dssp EEETTTCSBSCEEEEEEE-------CCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EEECccCCCcceeEEEec-------CCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCC
Confidence 999987642 22222 4488999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 256 ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 256 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
++++++++.|+.|++||+.+ +. ....+.+|...|.+++|+ +++|++++.|+.|++||+....
T Consensus 196 ~~~l~sg~~d~~v~~wd~~~--------~~--------~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 196 TRLFVSGACDASAKLWDVRE--------GM--------CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp SSEEEEEETTSCEEEEETTT--------CS--------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCEEEEEeCCCcEEEEECCC--------Ce--------eEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc
Confidence 99999999999999999998 65 677888999999999999 8999999999999999998765
Q ss_pred e-eecC--ccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEE
Q psy12614 334 L-VKYP--CTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCS 409 (708)
Q Consensus 334 ~-~~~~--~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 409 (708)
. ..+. .......+++|+|++++++++ .++.|++||..+.. ......+|...|.++
T Consensus 260 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~---------------------~~~~~~~h~~~v~~~ 318 (340)
T 1got_B 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD---------------------RAGVLAGHDNRVSCL 318 (340)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---------------------EEEEEECCSSCEEEE
T ss_pred EEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc---------------------EeeEeecCCCcEEEE
Confidence 3 2222 112245789999999999985 88999999988755 344556899999999
Q ss_pred EeCCCCcEEEEEc-CCceEEEE
Q psy12614 410 VVSNDGKYVAYST-ESCVRLHS 430 (708)
Q Consensus 410 ~~s~~g~~l~~~~-d~~i~i~~ 430 (708)
+|+|+|++|+++. |+.|++|+
T Consensus 319 ~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 319 GVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECTTSSCEEEEETTSCEEEEC
T ss_pred EEcCCCCEEEEEcCCccEEecC
Confidence 9999999999855 99999996
No 29
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-39 Score=319.10 Aligned_cols=288 Identities=15% Similarity=0.249 Sum_probs=234.0
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe-EEEEE-ec-CCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH-VDRVF-IG-DPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~-~~~~~-~~-h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
..+.+.+|.+.|.+++|+|+ +||+|+.||.|+|||+.++.. ....+ .+ |. ..|.+++|+ +++|++++.|++
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~--~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHK--KAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCC--SCEEEEEECTTSSEEEEEETTSC
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCcc--CCEEEEEECCCCCEEEEEeCCCc
Confidence 45678899999999999998 999999999999999987532 22355 44 88 999999999 899999999999
Q ss_pred EEEEECCC-------CeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCC--cEEEEEecccccccEEEEEE
Q psy12614 93 VNEYDMRR-------LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE--GLLYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 93 i~vwd~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~ 163 (708)
|++||+.. .+++..+.+|...|.+++|+|++++||+|+.|+.|++||+... .......+.+|...|.+++|
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 99999853 4567788999999999999999999999999999999999532 12223678899999999999
Q ss_pred CCCCCEEEEecCC-eEEEEEcCCC--ceEEEEEecccCCCCCceeEEEEEEccC--C-EEEEEcCCCcEEEEeCCCC---
Q psy12614 164 HSSGDYLVTGCAA-AVRVWDIHKG--HAIHKMSLDKSSKFSKNTAVWCVAFCAD--F-TIITGDSGGFVRFWDGKTG--- 234 (708)
Q Consensus 164 s~d~~~l~~~~~d-~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~l~~~~~dg~i~~wd~~~~--- 234 (708)
+|++++|++++.| +|++||..++ +++..+. +|...|++++|+|+ + .+++++.|+.|++||+..+
T Consensus 162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 234 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRIWKDYDDDWECVAVLN-------GHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDED 234 (330)
T ss_dssp CSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-------CCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTT
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc-------CCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcc
Confidence 9999999999999 9999998876 3444443 44889999999998 5 4899999999999998654
Q ss_pred -----eeEEEeec-cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeE-EEecccc-ceE
Q psy12614 235 -----VQWSDVKT-HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSV-NRVIHEG-DVK 306 (708)
Q Consensus 235 -----~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~-~v~ 306 (708)
.....+.. |...|.+++|++++ +|++++.||.|++|+..+ ++ |.... ...+|.. .|.
T Consensus 235 ~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~--------~~------~~~~~~~~~~h~~~~v~ 299 (330)
T 2hes_X 235 DQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVD--------GE------WKVFAKRALCHGVYEIN 299 (330)
T ss_dssp SCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEET--------TE------EEEEEEESCTTTTSCEE
T ss_pred ccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCC--------Cc------eEEEeccccccccceEE
Confidence 34455554 89999999999765 899999999999999987 42 21222 2356776 899
Q ss_pred EEEEe----CCEEEEEcCCCeEEEEeCCC
Q psy12614 307 SLALH----GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 307 ~l~~~----~~~l~s~~~d~~i~iw~~~~ 331 (708)
+++|+ +.+|++++.|+.|++|+++.
T Consensus 300 ~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 300 VVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 99997 56899999999999999864
No 30
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=319.22 Aligned_cols=312 Identities=13% Similarity=0.160 Sum_probs=245.8
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEE---EeecCCceEEEEEecCCCEEEEEeCCCcEEE
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSS---TAVTSGTCWCLSVHKKKRLLAAGTEQGHINL 137 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~---~~~~~~~v~~~~~s~~~~~la~~~~d~~i~i 137 (708)
..+.+|. ...|.+++|+ +++|++++.|++|++||++++..... ..+|...|.+++|+|++++||+|+.|+.|++
T Consensus 9 ~~~~~h~-~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~i 87 (345)
T 3fm0_A 9 GRVPAHP-DSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCI 87 (345)
T ss_dssp EEECCST-TSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eeecCCC-CCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEE
Confidence 4888998 3399999999 99999999999999999998864322 3589999999999999999999999999999
Q ss_pred EEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE
Q psy12614 138 FQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT 216 (708)
Q Consensus 138 wd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 216 (708)
||+..+.......+.+|...|.+++|+|++++|++++.| .|++||+.++.....+.... .|...|.+++|+|++.
T Consensus 88 w~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~----~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN----SHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC----CCCSCEEEEEECSSSS
T ss_pred EEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec----CcCCCeEEEEECCCCC
Confidence 999988665557889999999999999999999999999 99999998775443332221 4488899999999996
Q ss_pred -EEEEcCCCcEEEEeCCCCe--eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCccc-ccCCCCCCCCcce
Q psy12614 217 -IITGDSGGFVRFWDGKTGV--QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQV-CSTSGPEQGSSVW 292 (708)
Q Consensus 217 -l~~~~~dg~i~~wd~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~-~~~~g~~~~~~~~ 292 (708)
+++++.|+.|++||.++++ ....+.+|...|.+++|+|++++|++++.|+.|++|+....... ..... .....|
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~--~~~~~~ 241 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACS--GSDPSW 241 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC-----CEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceee--ccCCcc
Confidence 9999999999999998875 45678899999999999999999999999999999997541100 00000 011234
Q ss_pred EEeEEEec-cccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEe
Q psy12614 293 VRSVNRVI-HEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSL 369 (708)
Q Consensus 293 ~~~~~~~~-~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~ 369 (708)
.....+.+ |...|.+++|+ +..|++++.|+.|++|+.........+
T Consensus 242 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~------------------------------- 290 (345)
T 3fm0_A 242 KCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQP------------------------------- 290 (345)
T ss_dssp EEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSC-------------------------------
T ss_pred ceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCccee-------------------------------
Confidence 44445554 88889999998 788999999999999987543210000
Q ss_pred cCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc-EEEEE-cCCceEEEEEEe
Q psy12614 370 GSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK-YVAYS-TESCVRLHSLDL 433 (708)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~-~d~~i~i~~~~~ 433 (708)
..........+|...|.+++|+|++. +||++ .||+|++|++..
T Consensus 291 ---------------------~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 291 ---------------------TFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp ---------------------CEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred ---------------------eEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 00011222346889999999999984 88874 599999999986
No 31
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.3e-39 Score=313.89 Aligned_cols=284 Identities=16% Similarity=0.210 Sum_probs=249.8
Q ss_pred EEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy12614 62 DRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139 (708)
Q Consensus 62 ~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd 139 (708)
.+++.+|. ..|.+++|+ +++|++++.||+|++||+++++.+..+..|...|.+++|+|++++|++|+.|+.|++||
T Consensus 6 ~~~~~~h~--~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 6 KKTFSNRS--DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp EEEEEEEC--SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred EEeecCCC--CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 35899999 999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc-CC-E
Q psy12614 140 ISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA-DF-T 216 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~ 216 (708)
+.+++.+ ..+.+|.+.|.+++|+|++++|++++.| +|++||++++........ +|...|.+++|+| ++ .
T Consensus 84 ~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~------~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 84 YNTGEKV--VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE------GHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp TTTCCEE--EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC------CCCSCEEEEEECTTCTTE
T ss_pred CCCCcEE--EEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc------ccCCcEEEEEECCCCCCE
Confidence 9999887 7788999999999999999999999999 999999998855543333 3488999999999 44 5
Q ss_pred EEEEcCCCcEEEEeCCCCeeEEEee-ccccCeEEEEEeC--CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE
Q psy12614 217 IITGDSGGFVRFWDGKTGVQWSDVK-THKKDILALTVSE--DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293 (708)
Q Consensus 217 l~~~~~dg~i~~wd~~~~~~~~~~~-~~~~~i~~~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~ 293 (708)
+++|+.|+.|++||+.++.....+. +|...+..+.|+| ++++|++++.|+.|++||+.+ ++
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~--------~~-------- 219 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT--------KS-------- 219 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT--------TE--------
T ss_pred EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC--------Cc--------
Confidence 9999999999999998877655554 5668899999987 778999999999999999998 65
Q ss_pred EeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCce-eecCccCCCCceEEEEcCCc--EEEEEcCCeEEEEE
Q psy12614 294 RSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTL-VKYPCTLAQSTPVSLAKDIQ--HVLLQYTSHLELWS 368 (708)
Q Consensus 294 ~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~-~~~~~~~~~~~~~~~s~~~~--~l~~~~~~~i~i~~ 368 (708)
....+.+|...|.+++|+ +.+|++++.|+.|++||+.+..+ ..+..+.....+++++|++. +++++.++.+.+|+
T Consensus 220 ~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~ 299 (304)
T 2ynn_A 220 CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLS 299 (304)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEE
T ss_pred cceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEE
Confidence 678889999999999999 78999999999999999998764 44443445667889899875 58888999999998
Q ss_pred ecC
Q psy12614 369 LGS 371 (708)
Q Consensus 369 ~~~ 371 (708)
+..
T Consensus 300 ~~~ 302 (304)
T 2ynn_A 300 LGN 302 (304)
T ss_dssp CC-
T ss_pred ecc
Confidence 875
No 32
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.7e-39 Score=322.89 Aligned_cols=317 Identities=16% Similarity=0.211 Sum_probs=270.5
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
|.+.|.+++|+|||+++|++..++.+.+|+........ ...+|. ..|.+++|+ +++|++++ ||.|++||+.+++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~--~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~ 83 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQI-NTLNHG--EVVCAVTISNPTRHVYTGG-KGCVKVWDISHPG 83 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEE-EEECCS--SCCCEEEECSSSSEEEEEC-BSEEEEEETTSTT
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccc-eeccCC--CceEEEEEecCCcEEEEcC-CCeEEEEECCCCC
Confidence 45789999999999999999888888787766654444 455788 999999999 88899988 9999999998865
Q ss_pred E---eEEEe--ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 103 I---KSSTA--VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 103 ~---~~~~~--~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
. ...+. .|...|.+++|+|++++|++++.|+.|++||+.+++......+..|...|.+++|+|++++|++++.+
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 163 (337)
T 1gxr_A 84 NKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG 163 (337)
T ss_dssp CCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC
Confidence 3 33333 78999999999999999999999999999999998855457788899999999999999999999999
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED 255 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~ 255 (708)
.|++||+.+++.+..+.. +...+.+++|+|++. +++++.||.|++||+++++.+..+. +...+.+++|+|+
T Consensus 164 ~v~~~d~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQG-------HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPT 235 (337)
T ss_dssp CEEEEETTTTEEEEEECC-------CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTT
T ss_pred cEEEEeCCCCceeeeeec-------ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCC
Confidence 999999999988887753 378899999999995 8999999999999999998888775 7889999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 256 ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 256 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+++|++++.++.|++|++.+ ++ ...+..|...|.+++|+ +++|++++.|+.+++|++.+..
T Consensus 236 ~~~l~~~~~~~~i~~~~~~~--------~~---------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 236 GEWLAVGMESSNVEVLHVNK--------PD---------KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp SSEEEEEETTSCEEEEETTS--------SC---------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCcEEEEECCC--------CC---------eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 99999999999999999988 53 34567889999999999 8899999999999988885542
Q ss_pred eeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCC
Q psy12614 334 LVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSN 413 (708)
Q Consensus 334 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 413 (708)
. + ....+...+.+++|+|
T Consensus 299 ~------------------------------------------------------------~--~~~~~~~~v~~~~~s~ 316 (337)
T 1gxr_A 299 S------------------------------------------------------------I--FQSKESSSVLSCDISV 316 (337)
T ss_dssp E------------------------------------------------------------E--EEEECSSCEEEEEECT
T ss_pred E------------------------------------------------------------E--EEecCCCcEEEEEECC
Confidence 1 1 1124567899999999
Q ss_pred CCcEEEEE-cCCceEEEEEE
Q psy12614 414 DGKYVAYS-TESCVRLHSLD 432 (708)
Q Consensus 414 ~g~~l~~~-~d~~i~i~~~~ 432 (708)
++++|+++ .||.|++|++.
T Consensus 317 ~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 317 DDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp TSCEEEEEETTSCEEEEEEE
T ss_pred CCCEEEEecCCCeEEEEEEe
Confidence 99999985 49999999974
No 33
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-39 Score=335.09 Aligned_cols=339 Identities=11% Similarity=0.136 Sum_probs=275.2
Q ss_pred cCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeC----CCCCe-----EEEEEec----------CCCCCcEEEEEEe--
Q psy12614 23 APEPKVINCIACEPKSS-RLAVSRADQSIEIWDI----SETPH-----VDRVFIG----------DPLSNSIECLTWF-- 80 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~-~la~~~~dg~v~iwd~----~~~~~-----~~~~~~~----------h~~~~~v~~l~~~-- 80 (708)
..|.+.|++++|+|+++ +||+|+.||.|++||+ .+++. ....+.. |. ..|.+++|+
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~ 119 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTT--NQVTCLAWSHD 119 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------C--BCEEEEEECTT
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCC--CceEEEEEcCC
Confidence 34669999999999999 9999999999999999 88772 2224443 56 799999999
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc---
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR--- 157 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--- 157 (708)
+++|++++.||.|++|| .+++.+..+..|...|.+++|+|++++|++++.|+.|++||+.+++.. ..+..+...
T Consensus 120 ~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~ 196 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM--QHFELKETGGSS 196 (425)
T ss_dssp SSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE--EEECCC------
T ss_pred CCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE--EEeeccccCccc
Confidence 89999999999999999 778888999999999999999999999999999999999999999877 556666655
Q ss_pred ------------EEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC
Q psy12614 158 ------------ILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG 223 (708)
Q Consensus 158 ------------v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d 223 (708)
+.+++|+|++ .+++++.+ .|++||+.+++.+..+.. +...|.+++|+|+++ +++++.|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~d 268 (425)
T 1r5m_A 197 INAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIG-------HHGPISVLEFNDTNKLLLSASDD 268 (425)
T ss_dssp ---------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECC-------CSSCEEEEEEETTTTEEEEEETT
T ss_pred eeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeecc-------CCCceEEEEECCCCCEEEEEcCC
Confidence 8999999986 57778888 999999999988877753 378899999999995 8999999
Q ss_pred CcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc
Q psy12614 224 GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG 303 (708)
Q Consensus 224 g~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 303 (708)
|.|++||+.+++.+..+..|...|.+++|+|++ ++++++.|+.|++||+.+ ++ ....+..|..
T Consensus 269 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~--------~~--------~~~~~~~~~~ 331 (425)
T 1r5m_A 269 GTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ--------NT--------LLALSIVDGV 331 (425)
T ss_dssp SCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT--------TE--------EEEEEECTTC
T ss_pred CEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC--------Cc--------EeEecccCCc
Confidence 999999999999999999999999999999999 999999999999999988 65 6677788999
Q ss_pred ceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCC
Q psy12614 304 DVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHS 381 (708)
Q Consensus 304 ~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~ 381 (708)
.|.+++|+ +.+|++++.|+.|++|++.+....... +. ...++ ++..
T Consensus 332 ~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~--------~~---------~~~~~---~~~~------------ 379 (425)
T 1r5m_A 332 PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRS--------LY---------GNRDG---ILNP------------ 379 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECHHHHC----------------------------------C------------
T ss_pred cEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceee--------ee---------ccccc---ccCc------------
Confidence 99999999 889999999999999999754311110 00 00000 0110
Q ss_pred CCCcccCCCCceEEEEEEecCCC--ceEEEEeCCCCcEEEEE-cCCceEEEEEE
Q psy12614 382 NTTGVPLLSFPRLIVKMSAVNNA--TIRCSVVSNDGKYVAYS-TESCVRLHSLD 432 (708)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~s~~g~~l~~~-~d~~i~i~~~~ 432 (708)
.+.........+.. .|.+++|+|++++|+++ .||.|++|+++
T Consensus 380 ---------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 380 ---------LPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ---------EECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred ---------ccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 01123444455655 99999999999999885 59999999975
No 34
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-41 Score=347.09 Aligned_cols=359 Identities=13% Similarity=0.184 Sum_probs=279.9
Q ss_pred CcEEEEEEcCCCC-EEEEE----------eCCCcEEEEeCCCCCeE-EEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 27 KVINCIACEPKSS-RLAVS----------RADQSIEIWDISETPHV-DRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 27 ~~v~~~~~s~~~~-~la~~----------~~dg~v~iwd~~~~~~~-~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
..|.+++|+|+++ +||+| +.||.|+|||+.++... ......|. ..|.+++|+ +++|++++.||.
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVD--SKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCS--SCEEEEEECSSSSCEEEEESSSC
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecC--CceEEEEECCCCCeEEEEccCCe
Confidence 5688999999997 99999 88999999999987521 01223577 899999999 889999999999
Q ss_pred EEEEECCC----CeEeEEEeecCCceEEEEEecC-CCEEEEEeCCCcEEEEEccCCc------EEE-EEecccccccEEE
Q psy12614 93 VNEYDMRR----LNIKSSTAVTSGTCWCLSVHKK-KRLLAAGTEQGHINLFQISDEG------LLY-EKLLDRQQGRILC 160 (708)
Q Consensus 93 i~vwd~~~----~~~~~~~~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~------~~~-~~~~~~~~~~v~~ 160 (708)
|++||+.+ .+.+..+.+|...|.+++|+|+ +++|++++.|+.|++||+.+++ ... ...+..|...|.+
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVIS 170 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCE
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeE
Confidence 99999998 4588889999999999999998 8999999999999999999876 321 1234678899999
Q ss_pred EEECCC-CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCC---cEEEEeCCC
Q psy12614 161 TAWHSS-GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGG---FVRFWDGKT 233 (708)
Q Consensus 161 ~~~s~d-~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg---~i~~wd~~~ 233 (708)
++|+|+ +.+|++++.| .|++||+.+++.+..+....... ++...+.+++|+|++ .+++++.++ .|++||+++
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNS-GIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN 249 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSS-CCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccccc-ccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC
Confidence 999999 7899999999 99999999999888876542111 226789999999997 488999998 999999998
Q ss_pred C-eeEEEee-ccccCeEEEEEeC-CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEE
Q psy12614 234 G-VQWSDVK-THKKDILALTVSE-DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310 (708)
Q Consensus 234 ~-~~~~~~~-~~~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~ 310 (708)
+ ..+..+. +|...|.+++|+| ++++|++++.|+.|++||+.+ ++ ....+..|...|.+++|
T Consensus 250 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~--------~~--------~~~~~~~~~~~v~~~~~ 313 (416)
T 2pm9_A 250 ANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES--------AE--------QLSQFPARGNWCFKTKF 313 (416)
T ss_dssp TTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS--------CC--------EEEEEECSSSCCCCEEE
T ss_pred CCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC--------Cc--------cceeecCCCCceEEEEE
Confidence 6 6677777 8999999999999 999999999999999999998 76 67788899999999999
Q ss_pred e--C-CEEEEEcCCCeEEEEeCCCCceeecCcc---CCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCC
Q psy12614 311 H--G-NRLYSGGLDSYLSLSYYPPKTLVKYPCT---LAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTT 384 (708)
Q Consensus 311 ~--~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~---~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 384 (708)
+ + .+|++++.|+.|++|++.+......... ........+.+.+..++.... + ..
T Consensus 314 s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------------------~~ 373 (416)
T 2pm9_A 314 APEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEK--P------------------SV 373 (416)
T ss_dssp CTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSC--C------------------CS
T ss_pred CCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccc--c------------------cc
Confidence 9 5 7999999999999999987652221100 000011111111111110000 0 00
Q ss_pred cccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 385 GVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
..+ .....+...+.+++|+|+|++|+++. |+.|+||++.+
T Consensus 374 --------~~~-~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 374 --------FHL-QAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp --------SCC-CCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred --------ccc-cCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 011 11123566778999999999999966 99999999875
No 35
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.5e-38 Score=326.18 Aligned_cols=322 Identities=16% Similarity=0.282 Sum_probs=278.5
Q ss_pred eeeeccCCCCcE-EEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEE
Q psy12614 18 NIKFYAPEPKVI-NCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEY 96 (708)
Q Consensus 18 ~~~~~~~h~~~v-~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vw 96 (708)
..+.+.+|.+.| +| +++++++||+|+.||.|++||+.+++.+. .+.+|. ..|.+++|+++.|++++.||+|++|
T Consensus 110 ~~~~l~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~~-~~~~h~--~~v~~~~~~~~~l~s~~~dg~i~vw 184 (445)
T 2ovr_B 110 SPKVLKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLR-TLVGHT--GGVWSSQMRDNIIISGSTDRTLKVW 184 (445)
T ss_dssp CCEEEECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEE-ECCCCS--SCEEEEEEETTEEEEEETTSCEEEE
T ss_pred eeEEecccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEEE-EEcCCC--CCEEEEEecCCEEEEEeCCCeEEEE
Confidence 345688999875 55 45568999999999999999999998876 899999 9999999999999999999999999
Q ss_pred ECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 97 DMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
|+.+++.+..+.+|...|.+++|+ ++.+++|+.||.|++||+.+++.. ..+.+|...|.+++| +++++++++.|
T Consensus 185 d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~--~~~~~~~~~v~~~~~--~~~~l~~~~~d 258 (445)
T 2ovr_B 185 NAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCL--HVLMGHVAAVRCVQY--DGRRVVSGAYD 258 (445)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEE--EEEECCSSCEEEEEE--CSSCEEEEETT
T ss_pred ECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEE--EEEcCCcccEEEEEE--CCCEEEEEcCC
Confidence 999999999999999999999996 568999999999999999999887 678889999999999 78899999999
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeC
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE 254 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~ 254 (708)
.|++||+.+++.+..+.. +...+.+++| ++ .+++++.||.|++||+++++.+..+.+|...+.++.++
T Consensus 259 g~i~iwd~~~~~~~~~~~~-------~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~- 328 (445)
T 2ovr_B 259 FMVKVWDPETETCLHTLQG-------HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK- 328 (445)
T ss_dssp SCEEEEEGGGTEEEEEECC-------CSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE-
T ss_pred CEEEEEECCCCcEeEEecC-------CCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe-
Confidence 999999999998888763 3788999999 45 59999999999999999999999999999999988874
Q ss_pred CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec---cccceEEEEEeCCEEEEEcCCCeEEEEeCCC
Q psy12614 255 DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI---HEGDVKSLALHGNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 255 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~ 331 (708)
++++++++.||.|++||+.+ ++ ....+.. |...|.+++++++++++++.||.|++||+.+
T Consensus 329 -~~~l~~~~~dg~i~vwd~~~--------~~--------~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 329 -DNILVSGNADSTVKIWDIKT--------GQ--------CLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp -TTEEEEEETTSCEEEEETTT--------CC--------EEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred -CCEEEEEeCCCeEEEEECCC--------Cc--------EEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCC
Confidence 56999999999999999988 65 5566665 8889999999999999999999999999876
Q ss_pred CceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEe
Q psy12614 332 KTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVV 411 (708)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 411 (708)
+...... .... ...+...|.+++|
T Consensus 392 ~~~~~~~-----------------------------~~~~---------------------------~~~~~~~v~~~~~ 415 (445)
T 2ovr_B 392 GEFIRNL-----------------------------VTLE---------------------------SGGSGGVVWRIRA 415 (445)
T ss_dssp CCEEEEE-----------------------------EECT---------------------------TGGGTCEEEEEEE
T ss_pred Cceeeee-----------------------------eccc---------------------------cCCCCceEEEEEe
Confidence 5311100 0000 0246688999999
Q ss_pred CCCCcEEEEEc-CCc----eEEEEEEe
Q psy12614 412 SNDGKYVAYST-ESC----VRLHSLDL 433 (708)
Q Consensus 412 s~~g~~l~~~~-d~~----i~i~~~~~ 433 (708)
+|++.+++++. ||+ +.+||+..
T Consensus 416 s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 416 SNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp CSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred cCCEEEEEEcccCCCCccEEEEEECCC
Confidence 99999999865 887 99999875
No 36
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-38 Score=314.60 Aligned_cols=296 Identities=15% Similarity=0.197 Sum_probs=231.2
Q ss_pred EEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCC--eEeEEE-ee-cCCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy12614 63 RVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRL--NIKSST-AV-TSGTCWCLSVHKKKRLLAAGTEQGHINLF 138 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~--~~~~~~-~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iw 138 (708)
..+.+|. .+|.+++|++++|++++.|++|++||+.++ +....+ .. |.+.|.+++|+|++++||+++.|+.|++|
T Consensus 8 ~~~~~h~--~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw 85 (330)
T 2hes_X 8 KSLKLYK--EKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIW 85 (330)
T ss_dssp EEEECCS--SCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeeccCC--CceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 4889999 999999999669999999999999999875 455555 34 99999999999999999999999999999
Q ss_pred EccCCc-----EEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCC-C---ceEEEEEecccCCCCCceeEEE
Q psy12614 139 QISDEG-----LLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHK-G---HAIHKMSLDKSSKFSKNTAVWC 208 (708)
Q Consensus 139 d~~~~~-----~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~-~---~~~~~~~~~~~~~~~~~~~v~~ 208 (708)
|+.... ......+.+|...|.+++|+|++++|++++.| .|++||+.. + +.+..+. .|...|.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~-------~h~~~v~~ 158 (330)
T 2hes_X 86 AKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ-------EHSQDVKH 158 (330)
T ss_dssp EC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC-------CCSSCEEE
T ss_pred EcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec-------cCCCceEE
Confidence 985321 12236788999999999999999999999999 999999953 2 2333333 44889999
Q ss_pred EEEccCCE-EEEEcCCCcEEEEeCCCC--eeEEEeeccccCeEEEEEeCC--CCEEEEEecCCeEEEEEccCCcccccCC
Q psy12614 209 VAFCADFT-IITGDSGGFVRFWDGKTG--VQWSDVKTHKKDILALTVSED--ENYLYCAGVDPTVVCFQRTRKPQVCSTS 283 (708)
Q Consensus 209 ~~~~~~~~-l~~~~~dg~i~~wd~~~~--~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 283 (708)
++|+|++. +++++.|+.|++||..++ +++..+.+|...|.+++|+|+ +.+|++++.|+.|++|++..
T Consensus 159 v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~-------- 230 (330)
T 2hes_X 159 VIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG-------- 230 (330)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE--------
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC--------
Confidence 99999995 999999999999998776 678889999999999999998 67999999999999999976
Q ss_pred CCCCCCcceEEeEEEec-cccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcC
Q psy12614 284 GPEQGSSVWVRSVNRVI-HEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYT 361 (708)
Q Consensus 284 g~~~~~~~~~~~~~~~~-~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~ 361 (708)
+.......|.....+.. |...|.+++|+ +..|++++.|+.|++|+..++...
T Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~-------------------------- 284 (330)
T 2hes_X 231 DDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWK-------------------------- 284 (330)
T ss_dssp ECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEE--------------------------
T ss_pred CCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceE--------------------------
Confidence 32212233444455554 88999999999 778999999999999987432100
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCC-ceEEEEeCC--CCcEEEEE-cCCceEEEEEEe
Q psy12614 362 SHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNA-TIRCSVVSN--DGKYVAYS-TESCVRLHSLDL 433 (708)
Q Consensus 362 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~s~--~g~~l~~~-~d~~i~i~~~~~ 433 (708)
.+......|.. .|.+++|+| ++++|+++ .|++|++|++..
T Consensus 285 --------------------------------~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 285 --------------------------------VFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp --------------------------------EEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred --------------------------------EEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 11111224555 799999999 78889884 599999999864
No 37
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.2e-38 Score=315.63 Aligned_cols=282 Identities=15% Similarity=0.232 Sum_probs=239.5
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI 140 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~ 140 (708)
..+.+|. ..|.+++|+ +.+|++++.||+|++||..+++....+..|...|.+++|+|++.+||+++.|+.+++|++
T Consensus 58 ~~l~gH~--~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 58 RTLKGHG--NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEECCS--SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEecCCC--CeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 4899999 999999999 899999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCcE----EEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC-
Q psy12614 141 SDEGL----LYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD- 214 (708)
Q Consensus 141 ~~~~~----~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 214 (708)
..... .....+..|.+.|.+++|+|++..|++++.| +|++||+++++.+..+. +|...|.+++|+|+
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~ 208 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH-------GHGADVLCLDLAPSE 208 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-------CCSSCEEEEEECCCS
T ss_pred eccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc-------CCCCCeEEEEEEeCC
Confidence 64310 1114566799999999999999999999999 99999999999988876 33788999999874
Q ss_pred -C-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcce
Q psy12614 215 -F-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW 292 (708)
Q Consensus 215 -~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~ 292 (708)
+ .+++|+.||.|++||+++++++..+.+|...|.+++|+|++++|++++.|+.|++||+.. ++
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~--------~~------- 273 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA--------DR------- 273 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--------TE-------
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC--------Cc-------
Confidence 4 599999999999999999999999999999999999999999999999999999999987 43
Q ss_pred EEeEEEec--cccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEE
Q psy12614 293 VRSVNRVI--HEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWS 368 (708)
Q Consensus 293 ~~~~~~~~--~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~ 368 (708)
....+.. +...+.+++|+ +.+|++++.|+.|++||+.+..
T Consensus 274 -~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~----------------------------------- 317 (354)
T 2pbi_B 274 -EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS----------------------------------- 317 (354)
T ss_dssp -EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS-----------------------------------
T ss_pred -EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc-----------------------------------
Confidence 2222222 22356677777 6777777777777777764321
Q ss_pred ecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEE
Q psy12614 369 LGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHS 430 (708)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~ 430 (708)
......+|...|.+++|+|+|++|+++. |++|++|+
T Consensus 318 --------------------------~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 318 --------------------------RVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp --------------------------EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred --------------------------eEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 2233347889999999999999999855 99999995
No 38
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.4e-39 Score=331.24 Aligned_cols=320 Identities=13% Similarity=0.136 Sum_probs=267.5
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEe
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIK 104 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~ 104 (708)
..+++++|+|++++|++|+.||.|++||+.+++... .+.+|. .+....|+ +++|++++.||.|++||+.+++..
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~-~~~~~~---~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 132 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSK-MLKRAD---YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQR 132 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTT-TSCSCC---EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceee-EEecCC---ceEEEEEecCCCEEEEEECCCCEEEEeCCCccee
Confidence 335589999999999999999999999998865543 344332 33444556 899999999999999999999999
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEc
Q psy12614 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDI 183 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~ 183 (708)
..+.+|.+.|.+++|+|++++|++++.|+.|++||+.+++.. ..+.+|...|.+++|+|++++|++++.| .|++||+
T Consensus 133 ~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 133 EIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP--RTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp EETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC--EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred eecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc--eEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence 888999999999999999999999999999999999998876 6788999999999999999999999999 9999999
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEE---------------------EccCCE-EEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVA---------------------FCADFT-IITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~---------------------~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
.+++.+..+.... .+...+.+++ |+|+++ +++++.||.|++||+++++.+..+.
T Consensus 211 ~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 286 (420)
T 3vl1_A 211 GTGTTIHTFNRKE----NPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLP 286 (420)
T ss_dssp TTTEEEEEECBTT----BTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCCceeEEeecCC----CCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcc
Confidence 9999988886542 2244455554 568885 8899999999999999998777664
Q ss_pred -ccccCeEEEEEeCCCC-EEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec-cccceEEEEEe-CCEEEE
Q psy12614 242 -THKKDILALTVSEDEN-YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI-HEGDVKSLALH-GNRLYS 317 (708)
Q Consensus 242 -~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~v~~l~~~-~~~l~s 317 (708)
.|...|.+++|+|+++ +|++++.||.|++||+.+ ++ . ....+.. |...|.++.+. +.+|++
T Consensus 287 ~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~--------~~----~---~~~~~~~~~~~~v~~~~~~~~~~l~s 351 (420)
T 3vl1_A 287 SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS--------PE----C---PVGEFLINEGTPINNVYFAAGALFVS 351 (420)
T ss_dssp CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC--------TT----S---CSEEEEESTTSCEEEEEEETTEEEEE
T ss_pred cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC--------Cc----C---chhhhhccCCCCceEEEeCCCCEEEE
Confidence 5788999999999998 999999999999999988 53 0 1344444 67789999888 889999
Q ss_pred EcCCCeEEEEeCCCCc----------eeecCccCCCCceEEEEcCCc----EEEEEcCCeEEEEEecC
Q psy12614 318 GGLDSYLSLSYYPPKT----------LVKYPCTLAQSTPVSLAKDIQ----HVLLQYTSHLELWSLGS 371 (708)
Q Consensus 318 ~~~d~~i~iw~~~~~~----------~~~~~~~~~~~~~~~~s~~~~----~l~~~~~~~i~i~~~~~ 371 (708)
++.|+.|++|++.... ...+..+......++|+|+++ +++++.++.+.+|++++
T Consensus 352 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 352 SGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp ETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 9999999999987632 222233455678899999998 77778999999999875
No 39
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-38 Score=329.01 Aligned_cols=343 Identities=16% Similarity=0.194 Sum_probs=271.9
Q ss_pred CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CC-EEEEEcCCCcEEEEEC----CCCe------EeEEEee-----
Q psy12614 48 QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--ND-RLFSGGLQGFVNEYDM----RRLN------IKSSTAV----- 109 (708)
Q Consensus 48 g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~-~l~s~~~d~~i~vwd~----~~~~------~~~~~~~----- 109 (708)
..+.+|++....... ....|. ..|.+++|+ ++ +|++++.||.|++||+ .+++ ....+..
T Consensus 25 ~~~~~~~~~~~~~~~-~~~~~~--~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (425)
T 1r5m_A 25 SIDSSDDLDGFVKIL-KEIVKL--DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALS 101 (425)
T ss_dssp ---------CCCEEC-EEEEEC--SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC
T ss_pred cccccccchhhhhhe-eeeecc--CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccccc
Confidence 346678887655443 445566 899999999 77 9999999999999999 8888 4555554
Q ss_pred -----cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEc
Q psy12614 110 -----TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDI 183 (708)
Q Consensus 110 -----~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~ 183 (708)
|.+.|.+++|+|++++|++++.||.|++|| .+++.. ..+..|...|.+++|+|++++|++++.| .|++||+
T Consensus 102 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 178 (425)
T 1r5m_A 102 ASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALL--NVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNV 178 (425)
T ss_dssp ------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEE--EEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred ccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCee--eeccCCCccEEEEEECCCCCEEEEEecCCeEEEEEC
Confidence 677999999999999999999999999999 555555 6788899999999999999999999999 9999999
Q ss_pred CCCceEEEEEecccCCCCCcee---------------EEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeE
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTA---------------VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDIL 248 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~ 248 (708)
.+++.+..+... ... +.+++|+|++.+++++.+|.|++||+.+++.+..+..|...|.
T Consensus 179 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~ 251 (425)
T 1r5m_A 179 ISGTVMQHFELK-------ETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPIS 251 (425)
T ss_dssp TTTEEEEEECCC----------------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEE
T ss_pred CCCcEEEEeecc-------ccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceE
Confidence 999988887654 333 8899999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEE
Q psy12614 249 ALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLS 327 (708)
Q Consensus 249 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw 327 (708)
+++|+|++++|++++.|+.|++||+.+ ++ ....+..|...|.+++|+ ...+++++.|+.|++|
T Consensus 252 ~~~~~~~~~~l~~~~~d~~i~i~d~~~--------~~--------~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~ 315 (425)
T 1r5m_A 252 VLEFNDTNKLLLSASDDGTLRIWHGGN--------GN--------SQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLW 315 (425)
T ss_dssp EEEEETTTTEEEEEETTSCEEEECSSS--------BS--------CSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEE
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECCC--------Cc--------cceEecCCCccEEEEEECCCCEEEEEeCCCcEEEE
Confidence 999999999999999999999999988 54 456667899999999999 3499999999999999
Q ss_pred eCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceE
Q psy12614 328 YYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIR 407 (708)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 407 (708)
|+.+.. .......+...|.
T Consensus 316 d~~~~~-------------------------------------------------------------~~~~~~~~~~~i~ 334 (425)
T 1r5m_A 316 SLKQNT-------------------------------------------------------------LLALSIVDGVPIF 334 (425)
T ss_dssp ETTTTE-------------------------------------------------------------EEEEEECTTCCEE
T ss_pred ECCCCc-------------------------------------------------------------EeEecccCCccEE
Confidence 885432 2233335678899
Q ss_pred EEEeCCCCcEEEEEc-CCceEEEEEEecCCcc--------------eeEEeecCCcccccceeEEEEEecCCCeEEEEec
Q psy12614 408 CSVVSNDGKYVAYST-ESCVRLHSLDLDGDKP--------------QISRIKNLPAPLFKSIFTHVLISADSTLLLAVSL 472 (708)
Q Consensus 408 ~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~--------------~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~ 472 (708)
+++|+|++++|+++. |+.|++|++....... ....+..+..|.....|++++|+|++++|++++.
T Consensus 335 ~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 414 (425)
T 1r5m_A 335 AGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYS 414 (425)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEES
T ss_pred EEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEec
Confidence 999999999999855 9999999998633000 0001222455421117888999999999999999
Q ss_pred CCc--EEEec
Q psy12614 473 NGP--LYIID 480 (708)
Q Consensus 473 dg~--i~~~~ 480 (708)
||. +|+++
T Consensus 415 dg~i~iw~~~ 424 (425)
T 1r5m_A 415 LQEGSVVAIP 424 (425)
T ss_dssp SSCCEEEECC
T ss_pred CceEEEEeec
Confidence 998 88764
No 40
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.8e-37 Score=306.56 Aligned_cols=288 Identities=14% Similarity=0.223 Sum_probs=245.8
Q ss_pred eEeEEEeecCCceEEEEEecCC-CEEEEEeCCCcEEEEEccCCcE---EEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 102 NIKSSTAVTSGTCWCLSVHKKK-RLLAAGTEQGHINLFQISDEGL---LYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
.+..++.+|.+.|++++|+|++ ++|++|+.|++|++|++..... .....+.+|...|.+++|+|++++|++++.|
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 4566788999999999999965 7999999999999999875321 2236788999999999999999999999999
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED 255 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~ 255 (708)
+|++||+.+++.+..+. +|...|.+++|+|++. +++++.|+.|++||++ ++.+..+.+|...|.+++++|.
T Consensus 88 ~v~~wd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 88 TLRLWDVATGETYQRFV-------GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp EEEEEETTTTEEEEEEE-------CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC
T ss_pred EEEEEECCCCCeeEEEc-------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccC
Confidence 99999999999888876 3488999999999995 9999999999999986 6677888899999999999985
Q ss_pred ------CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEE
Q psy12614 256 ------ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLS 327 (708)
Q Consensus 256 ------~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw 327 (708)
+..+++++.|+.|++||+.+ ++ ....+.+|...|.+++|+ +.+|++++.|+.|++|
T Consensus 160 ~~~~~~~~~l~s~~~d~~i~~wd~~~--------~~--------~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iw 223 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKMVKAWNLNQ--------FQ--------IEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLW 223 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTT--------TE--------EEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred CCCCCCccEEEEEeCCCEEEEEECCc--------ch--------hheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 45899999999999999988 54 566788999999999999 8899999999999999
Q ss_pred eCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE-------e
Q psy12614 328 YYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS-------A 400 (708)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 400 (708)
|+.+...............++|+|++.+++++.+..+++|++.... .+.... .
T Consensus 224 d~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~--------------------~~~~~~~~~~~~~~ 283 (319)
T 3frx_A 224 NLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQY--------------------LVDDLRPEFAGYSK 283 (319)
T ss_dssp ETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEE--------------------EEEEECCCCTTCCG
T ss_pred ECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCe--------------------eeeccCcccccccc
Confidence 9998774333324456788999999999999988999999998643 111111 1
Q ss_pred cCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 401 VNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 401 ~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
.+...+.+++|+|||++|++|. |+.|++|++.+
T Consensus 284 ~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 284 AAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp GGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred CcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 2456789999999999999855 99999999986
No 41
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.1e-37 Score=305.99 Aligned_cols=286 Identities=15% Similarity=0.303 Sum_probs=247.7
Q ss_pred CeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEE
Q psy12614 59 PHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHIN 136 (708)
Q Consensus 59 ~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~ 136 (708)
..+...+.+|. ..|.+++|+ +++|++++.||.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 13 ~~~~~~~~gh~--~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 13 YALKFTLAGHT--KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 90 (312)
T ss_dssp CEEEEEECCCS--SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ceeEEEEcccC--CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEE
Confidence 34556889999 999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC
Q psy12614 137 LFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF 215 (708)
Q Consensus 137 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 215 (708)
+||+.+++.. ..+.+|...|.+++|+|++++|++++.| .|++||+++++.+..+.. +...|.+++|+|++
T Consensus 91 vwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~ 161 (312)
T 4ery_A 91 IWDVSSGKCL--KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-------HSDPVSAVHFNRDG 161 (312)
T ss_dssp EEETTTCCEE--EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEEEEEECTTS
T ss_pred EEECCCCcEE--EEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC-------CCCcEEEEEEcCCC
Confidence 9999999887 6788999999999999999999999999 999999999998887753 37889999999999
Q ss_pred E-EEEEcCCCcEEEEeCCCCeeEEEee-ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE
Q psy12614 216 T-IITGDSGGFVRFWDGKTGVQWSDVK-THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293 (708)
Q Consensus 216 ~-l~~~~~dg~i~~wd~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~ 293 (708)
. +++++.||.|++||+++++.+..+. .+...+..++|+|++++|++++.|+.|++||+.+ ++
T Consensus 162 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~--------~~-------- 225 (312)
T 4ery_A 162 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK--------GK-------- 225 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT--------TE--------
T ss_pred CEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC--------Cc--------
Confidence 5 8999999999999999998877654 4667899999999999999999999999999998 64
Q ss_pred EeEEEeccccceEEE--EEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEE
Q psy12614 294 RSVNRVIHEGDVKSL--ALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWS 368 (708)
Q Consensus 294 ~~~~~~~~~~~v~~l--~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~ 368 (708)
....+.+|...+..+ .+. +.+|++++.|+.|++||+.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~----------------------------------- 270 (312)
T 4ery_A 226 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE----------------------------------- 270 (312)
T ss_dssp EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC-----------------------------------
T ss_pred EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch-----------------------------------
Confidence 556666776554332 222 6788888888888888875432
Q ss_pred ecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE---cCCceEEEEEE
Q psy12614 369 LGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS---TESCVRLHSLD 432 (708)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~---~d~~i~i~~~~ 432 (708)
+.....+|...|.+++|+|++.+++++ .|++|++|+.+
T Consensus 271 --------------------------~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 271 --------------------------IVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp --------------------------EEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred --------------------------hhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 333445788899999999999999985 39999999864
No 42
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.2e-39 Score=325.01 Aligned_cols=304 Identities=15% Similarity=0.236 Sum_probs=245.5
Q ss_pred cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEE
Q psy12614 49 SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLL 126 (708)
Q Consensus 49 ~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 126 (708)
.+..|+..+..... .+.+|. +.|.+++|+ +++|++|+.|++|++||+.+++....+..|...|.+++|+|++++|
T Consensus 47 ~~~~~~~~~~~~~~-~l~gH~--~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~l 123 (380)
T 3iz6_a 47 TAVSFNPTDLVCCR-TLQGHS--GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSV 123 (380)
T ss_dssp GCCCCCCCCCEEEE-EECCCS--SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEE
T ss_pred cccccccceeEEee-cccccc--cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEE
Confidence 45567766655554 899999 999999999 8999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCcEEEEEccCCc-----EEEEEecccccccEEEEEECCCC-CEEEEecCC-eEEEEEcCCCceEEEEEecccCC
Q psy12614 127 AAGTEQGHINLFQISDEG-----LLYEKLLDRQQGRILCTAWHSSG-DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSK 199 (708)
Q Consensus 127 a~~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~ 199 (708)
|+|+.|+.+++||+.+.. ......+.+|.+.|.++.|+|++ ..|++++.| +|++||+.+++.+..+..... .
T Consensus 124 as~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~-~ 202 (380)
T 3iz6_a 124 ACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFP-S 202 (380)
T ss_dssp EECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSS-S
T ss_pred EEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccC-C
Confidence 999999999999987532 11124678999999999999974 579999999 999999999998877643210 0
Q ss_pred CCCceeEEEEEEcc-CC-EEEEEcCCCcEEEEeCC-CCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCC
Q psy12614 200 FSKNTAVWCVAFCA-DF-TIITGDSGGFVRFWDGK-TGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRK 276 (708)
Q Consensus 200 ~~~~~~v~~~~~~~-~~-~l~~~~~dg~i~~wd~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 276 (708)
+|...|.+++|++ ++ .+++|+.||.|++||++ .++.+..+.+|...|.+++|+|++++|++++.||.|++||+.+
T Consensus 203 -~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~- 280 (380)
T 3iz6_a 203 -GHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT- 280 (380)
T ss_dssp -SCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT-
T ss_pred -CCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC-
Confidence 4488899999987 55 48999999999999998 4577888999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCcceEEeEEEeccc-------cceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceE
Q psy12614 277 PQVCSTSGPEQGSSVWVRSVNRVIHE-------GDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPV 347 (708)
Q Consensus 277 ~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 347 (708)
++ ....+..+. ..|.+++|+ +.+|++|+.||.|++||+...
T Consensus 281 -------~~--------~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~--------------- 330 (380)
T 3iz6_a 281 -------GH--------QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA--------------- 330 (380)
T ss_dssp -------TE--------EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC---------------
T ss_pred -------Cc--------EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC---------------
Confidence 54 333333221 235566665 566666666666666665332
Q ss_pred EEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEE---EecCCCceEEEEeCCCCcEEEEEc-C
Q psy12614 348 SLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKM---SAVNNATIRCSVVSNDGKYVAYST-E 423 (708)
Q Consensus 348 ~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~s~~g~~l~~~~-d 423 (708)
+ .+..+ ..+|...|.+++|+|+|++|++|. |
T Consensus 331 -------------------------~--------------------~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 365 (380)
T 3iz6_a 331 -------------------------E--------------------MVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD 365 (380)
T ss_dssp -------------------------C--------------------EEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT
T ss_pred -------------------------c--------------------eEEEEecccCCCCCceEEEEECCCCCEEEEeeCC
Confidence 2 11111 136788999999999999999966 9
Q ss_pred CceEEEEEEe
Q psy12614 424 SCVRLHSLDL 433 (708)
Q Consensus 424 ~~i~i~~~~~ 433 (708)
++|++|++..
T Consensus 366 ~~i~iW~~~~ 375 (380)
T 3iz6_a 366 KNLKIWAFSG 375 (380)
T ss_dssp SCEEEEECCS
T ss_pred CCEEEEecCC
Confidence 9999999875
No 43
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.9e-38 Score=312.51 Aligned_cols=297 Identities=11% Similarity=0.141 Sum_probs=233.9
Q ss_pred EEEecCCCCCcEEEEEE-----e---CCEEEEEcCCCcEEEEECCC-------CeEeEEEeecCCceEEEEEecCCCEEE
Q psy12614 63 RVFIGDPLSNSIECLTW-----F---NDRLFSGGLQGFVNEYDMRR-------LNIKSSTAVTSGTCWCLSVHKKKRLLA 127 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~-----~---~~~l~s~~~d~~i~vwd~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~la 127 (708)
..+.+|. ..|++++| + +++|++|+.|++|++||+.+ +.+...+.+|...|.+++|+|++.+|+
T Consensus 15 ~~l~gH~--~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 15 GILEGHS--DWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEECCS--SCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeccch--hhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 4899999 99999999 3 78999999999999999875 346778889999999999999999999
Q ss_pred EEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeE
Q psy12614 128 AGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAV 206 (708)
Q Consensus 128 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v 206 (708)
+++.|+.|++||+.+++.. ..+.+|...|.+++|+|++++|++++.| .|++||+.. ......... . .+...+
T Consensus 93 s~s~D~~v~lwd~~~~~~~--~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~-~---~~~~~v 165 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTY--KRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEK-E---NHSDWV 165 (343)
T ss_dssp EEETTSEEEEEETTSSCEE--EEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTT-T---SCSSCE
T ss_pred EEcCCCcEEEEECCCCcEE--EEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-Cceeeeecc-c---CCCcee
Confidence 9999999999999999887 6788999999999999999999999999 999999973 333222211 1 347889
Q ss_pred EEEEEccCC-----------EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 207 WCVAFCADF-----------TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 207 ~~~~~~~~~-----------~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.+++|+|++ .+++++.||.|++|| ..++....+.+|...|.+++|+|++++|++++.||.|++||+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred eeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 999999985 489999999999999 45777788899999999999999999999999999999999954
Q ss_pred CcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCc
Q psy12614 276 KPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQ 354 (708)
Q Consensus 276 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~ 354 (708)
.. . ... ...+...|.+++|+ ...+++++.|+.+++|++.+.......
T Consensus 245 --------~~----~---~~~-~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~---------------- 292 (343)
T 2xzm_R 245 --------LT----Y---PQR-EFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVC---------------- 292 (343)
T ss_dssp --------CS----S---CSE-EEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEE----------------
T ss_pred --------Cc----c---cce-eecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceE----------------
Confidence 21 0 111 12345668888888 333445566778888887654311100
Q ss_pred EEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 355 HVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 355 ~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
.+.... ........+|...+.+++|+|+|++|++|. ||.|++|++++
T Consensus 293 -------------~~~~~~-------------------~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 293 -------------TIEAEP-------------------ITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp -------------ECCCCS-------------------GGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred -------------EeecCc-------------------chhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 000000 000000124667899999999999999855 99999999986
No 44
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.7e-37 Score=319.92 Aligned_cols=333 Identities=15% Similarity=0.189 Sum_probs=276.4
Q ss_pred EeCCCCCeEEEEEecCCCCCc-EEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC
Q psy12614 53 WDISETPHVDRVFIGDPLSNS-IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE 131 (708)
Q Consensus 53 wd~~~~~~~~~~~~~h~~~~~-v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~ 131 (708)
|...........+.+|. .. +.++.+++++|++|+.||+|++||+.+++.+..+.+|.+.|++++|+|++ +|++|+.
T Consensus 105 w~~~~~~~~~~~l~~h~--~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~ 181 (464)
T 3v7d_B 105 WYNPKFVPQRTTLRGHM--TSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGST 181 (464)
T ss_dssp HHCTTCCCEEEEEECCS--SSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEET
T ss_pred hcCCCcCcceEEEcCCC--CCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeC
Confidence 43333333445899998 55 68888889999999999999999999999999999999999999999988 9999999
Q ss_pred CCcEEEEEccCCcEEEEEecccccccEEEEEEC--CCCCEEEEecCC-eEEEEEcCCCceEEEEEec-------------
Q psy12614 132 QGHINLFQISDEGLLYEKLLDRQQGRILCTAWH--SSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLD------------- 195 (708)
Q Consensus 132 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s--~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~------------- 195 (708)
||.|++||+.+++.. ..+.+|...|.+++|+ +++++|++++.| .|++||+.++.........
T Consensus 182 dg~i~vwd~~~~~~~--~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (464)
T 3v7d_B 182 DRTVRVWDIKKGCCT--HVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEEN 259 (464)
T ss_dssp TSCEEEEETTTTEEE--EEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGC
T ss_pred CCCEEEEECCCCcEE--EEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCC
Confidence 999999999999877 7788999999999998 688999999999 9999999887644321100
Q ss_pred ------ccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeE
Q psy12614 196 ------KSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268 (708)
Q Consensus 196 ------~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 268 (708)
.. ++...+.++ ++++ .+++++.||.|++||+.+++.+..+.+|...|.+++|+|+++++++++.||.|
T Consensus 260 ~~~~~~~~---~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i 334 (464)
T 3v7d_B 260 PYFVGVLR---GHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTI 334 (464)
T ss_dssp TTEEEEEC---CCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred eEEEEEcc---CccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Confidence 01 336677776 4555 59999999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEE
Q psy12614 269 VCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVS 348 (708)
Q Consensus 269 ~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~ 348 (708)
++||+.+ ++ ....+.+|...|.++++++.++++++.||.|++||+.+...............++
T Consensus 335 ~vwd~~~--------~~--------~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 398 (464)
T 3v7d_B 335 RIWDLEN--------GE--------LMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITT 398 (464)
T ss_dssp EEEETTT--------TE--------EEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEE
T ss_pred EEEECCC--------Cc--------EEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEE
Confidence 9999998 65 6778889999999999999999999999999999999876433332445667789
Q ss_pred EEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceE
Q psy12614 349 LAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVR 427 (708)
Q Consensus 349 ~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~ 427 (708)
+++++++++++.++.|++||+.+++ .+......+...|.+++|+ +..+++++ .++.+.
T Consensus 399 ~~~~~~~l~~~~dg~i~iwd~~~g~--------------------~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~ 457 (464)
T 3v7d_B 399 FYVSDNILVSGSENQFNIYNLRSGK--------------------LVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSF 457 (464)
T ss_dssp EEECSSEEEEEETTEEEEEETTTCC--------------------EEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEE
T ss_pred EEeCCCEEEEecCCeEEEEECCCCc--------------------EEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEE
Confidence 9999999999889999999999877 3443455778899999997 33344444 477766
Q ss_pred EEEEE
Q psy12614 428 LHSLD 432 (708)
Q Consensus 428 i~~~~ 432 (708)
+|-++
T Consensus 458 i~~ld 462 (464)
T 3v7d_B 458 LEILD 462 (464)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 66554
No 45
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.1e-38 Score=316.72 Aligned_cols=309 Identities=13% Similarity=0.150 Sum_probs=227.3
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC------CCcEEEEECCCCe
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL------QGFVNEYDMRRLN 102 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~------d~~i~vwd~~~~~ 102 (708)
.+.+.+++.++...+ +.....|++... ...+|. ..|.+++|+ |.+|++++. |+.|++|+..++.
T Consensus 10 g~d~g~~~~~~~~~g-~~~~~~w~~p~~-----~p~~H~--~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~ 81 (357)
T 4g56_B 10 GVDLGTENLYFQSNG-SSKGSAWGRPVT-----APACME--VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGA 81 (357)
T ss_dssp ------------------------------------CCC--SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC--
T ss_pred CCCCCccceEEecCC-CccccccCCCCC-----Cccccc--CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCC
Confidence 455666666655544 567899998653 345788 999999999 999999997 7889999988875
Q ss_pred Ee----EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE--EecccccccEEEEEECCCCCEEEEecCC
Q psy12614 103 IK----SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE--KLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 103 ~~----~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
+. .....|...|.+++|+|++.+ ++++.||.|++||+.+++.... ....+|.+.|.+++|+|++++|++++.|
T Consensus 82 ~~~~~~~~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d 160 (357)
T 4g56_B 82 PNESLCTAGVQTEAGVTDVAWVSEKGI-LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD 160 (357)
T ss_dssp -CGGGCSEEEECSSCEEEEEEETTTEE-EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred cceeEecccCCCCCCEEEEEEcCCCCE-EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 43 345578899999999999865 5678899999999998765421 2345789999999999999999999999
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEee--ccccCeEEEE
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDVK--THKKDILALT 251 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~--~~~~~i~~~~ 251 (708)
.|++||+++++.+..+.. |...|.+++|+|++ .+++++.||.|++||+++++....+. .+...+.+++
T Consensus 161 g~v~iwd~~~~~~~~~~~~-------h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~ 233 (357)
T 4g56_B 161 FSVKVWDLSQKAVLKSYNA-------HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVT 233 (357)
T ss_dssp SCEEEEETTTTEEEEEECC-------CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEE
T ss_pred CeEEEEECCCCcEEEEEcC-------CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchh
Confidence 999999999998888763 38899999999987 38899999999999999988766543 4677899999
Q ss_pred EeCCC-CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCCeEEEE
Q psy12614 252 VSEDE-NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLS 327 (708)
Q Consensus 252 ~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw 327 (708)
|+|++ .+|++|+.|+.|++||+.+ ++ ....+.+|...|.+++|+ +.+|++++.|++|++|
T Consensus 234 ~sp~~~~~la~g~~d~~i~~wd~~~--------~~--------~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iw 297 (357)
T 4g56_B 234 WHPEKDDTFACGDETGNVSLVNIKN--------PD--------SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVL 297 (357)
T ss_dssp ECTTSTTEEEEEESSSCEEEEESSC--------GG--------GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred hhhcccceEEEeecccceeEEECCC--------Cc--------EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEE
Confidence 99974 6889999999999999988 54 456788999999999998 3679999999999999
Q ss_pred eCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceE
Q psy12614 328 YYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIR 407 (708)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 407 (708)
|+++.. +... .+|...|+
T Consensus 298 d~~~~~-------------------------------------------------------------~~~~-~~H~~~V~ 315 (357)
T 4g56_B 298 DADFSE-------------------------------------------------------------VFRD-LSHRDFVT 315 (357)
T ss_dssp CTTSCE-------------------------------------------------------------EEEE-CCCSSCEE
T ss_pred ECCCCc-------------------------------------------------------------EeEE-CCCCCCEE
Confidence 986542 1221 26788999
Q ss_pred EEEeCC-CCcEEEE-EcCCceEEEEEEe
Q psy12614 408 CSVVSN-DGKYVAY-STESCVRLHSLDL 433 (708)
Q Consensus 408 ~~~~s~-~g~~l~~-~~d~~i~i~~~~~ 433 (708)
+++|+| ++++|++ |.|++|++|++..
T Consensus 316 ~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 316 GVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 999998 7899998 5599999999975
No 46
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.4e-36 Score=304.57 Aligned_cols=295 Identities=16% Similarity=0.220 Sum_probs=248.3
Q ss_pred eeeccCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCe----EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCC
Q psy12614 19 IKFYAPEPKVINCIACEPK-SSRLAVSRADQSIEIWDISETPH----VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQG 91 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~-~~~la~~~~dg~v~iwd~~~~~~----~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~ 91 (708)
...+.||.+.|++++|+|+ +++||+|+.||+|+|||+.+++. ....+.+|. ..|.+++|+ +++|++++.|+
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~--~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS--HFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCS--SCEEEEEECTTSSEEEEEETTS
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCC--CCEEEEEECCCCCEEEEEcccc
Confidence 3468999999999999998 68999999999999999987542 335789999 999999999 89999999999
Q ss_pred cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC--CE
Q psy12614 92 FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG--DY 169 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~--~~ 169 (708)
.|++|+............+...+..+.+++++++|++++.|+.+++||....... .....+|...+..++|++++ .+
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY-TVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE-EECSSSCSSCEEEEEECSCSSSCE
T ss_pred cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceE-EEEeccccCcccceEEccCCCCcE
Confidence 9999999999999999999999999999999999999999999999998876554 25677899999999998875 57
Q ss_pred EEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCe
Q psy12614 170 LVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI 247 (708)
Q Consensus 170 l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i 247 (708)
+++++.| .|++||+.+++.+..+. .|...|.+++|+|+++ +++++.||.|++||+++++.+..+.. ...|
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~-------~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~v 259 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHI-------GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDII 259 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-SSCE
T ss_pred EEEEcCCCEEEEEECCCCceeeEec-------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC-CceE
Confidence 8899999 99999999999888775 3488999999999995 88999999999999999999988874 5689
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEE
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLS 325 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~ 325 (708)
.+++|+|++.+ ++++.|+.|++||+........... .........|...|.+++|+ +++|++|+.||.|+
T Consensus 260 ~~~~~~~~~~~-~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 260 NALCFSPNRYW-LCAATGPSIKIWDLEGKIIVDELKQ-------EVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp EEEEECSSSSE-EEEEETTEEEEEETTTTEEEEEECC-------C-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeeecCCCCce-eeccCCCEEEEEECCCCeEEEeccc-------cceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 99999998855 5566799999999987111100000 01223345788999999999 88999999999999
Q ss_pred EEeCCCC
Q psy12614 326 LSYYPPK 332 (708)
Q Consensus 326 iw~~~~~ 332 (708)
+||+.++
T Consensus 332 iW~~~tG 338 (340)
T 4aow_A 332 VWQVTIG 338 (340)
T ss_dssp EEEEEC-
T ss_pred EEeCCCc
Confidence 9998765
No 47
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=308.37 Aligned_cols=288 Identities=13% Similarity=0.192 Sum_probs=257.4
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEE
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNE 95 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~v 95 (708)
+...+.+|.+.|++++|+|++++||+|+.||.|+|||+.+++.+. .+.+|. ..|.+++|+ +++|++++.||.|++
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~h~--~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLG-TLDGHT--GTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEE-EECCCS--SCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhh-hhhhcC--CcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 344578999999999999999999999999999999999998876 899999 999999999 899999999999999
Q ss_pred EECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC-----CcEEEEEccCCcEE---------EEEecccccc--cEE
Q psy12614 96 YDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ-----GHINLFQISDEGLL---------YEKLLDRQQG--RIL 159 (708)
Q Consensus 96 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~~~---------~~~~~~~~~~--~v~ 159 (708)
||+.+++.+..+. +...|.+++|+|+++++++++.+ +.|++||+..+... ....+..|.+ .+.
T Consensus 101 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 101 WDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp EETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred EECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 9999999998888 88999999999999999999998 99999999865321 0023334555 899
Q ss_pred EEEECCCCCEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCee
Q psy12614 160 CTAWHSSGDYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ 236 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~ 236 (708)
+++|+|++++|++++.+ .|++||+.+ ++.+..+.. +...|.+++|+|++. +++++.||.|++||+.+++.
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL-------HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC-------CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec-------CCCceeEEEECCCCCEEEEecCCceEEEEECCCCce
Confidence 99999999999999999 999999998 666666653 378899999999995 88999999999999999999
Q ss_pred EEEeeccccCeEEEEEeCCCCEEEEEecCC--------------eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccc
Q psy12614 237 WSDVKTHKKDILALTVSEDENYLYCAGVDP--------------TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE 302 (708)
Q Consensus 237 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--------------~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 302 (708)
+..+. +...+.+++|+|+++++++++.++ .+++||..+ ++ ....+.+|.
T Consensus 253 ~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~--------~~--------~~~~~~~~~ 315 (369)
T 3zwl_B 253 LKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF--------EE--------EIGRVQGHF 315 (369)
T ss_dssp EEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT--------CC--------EEEEEECCS
T ss_pred eeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC--------Cc--------chhheeccc
Confidence 88887 788999999999999999999988 899999988 76 677888999
Q ss_pred cceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 303 GDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 303 ~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
..|.+++|+ +++|++++.||.|++|++....
T Consensus 316 ~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 316 GPLNTVAISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEECcccc
Confidence 999999999 8899999999999999997654
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.6e-37 Score=318.67 Aligned_cols=294 Identities=13% Similarity=0.131 Sum_probs=254.7
Q ss_pred ceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC------eEEEEEecCCCCCcEEEEEEe-C----
Q psy12614 13 TYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETP------HVDRVFIGDPLSNSIECLTWF-N---- 81 (708)
Q Consensus 13 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~------~~~~~~~~h~~~~~v~~l~~~-~---- 81 (708)
.......+.+.+|.+.|++++|+| ++||+|+.||.|+|||+.+++ .+. .+.+|. ..|.+++|+ .
T Consensus 3 ~~~~~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~h~--~~v~~~~~~~~~~~~ 77 (397)
T 1sq9_A 3 KVFIATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSY-SHFVHK--SGLHHVDVLQAIERD 77 (397)
T ss_dssp CEEEEEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEE-EEECCT--TCEEEEEEEEEEETT
T ss_pred hhhhhhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcce-EEecCC--CcEEEEEEecccccC
Confidence 344566778999999999999999 799999999999999999987 454 788999 999999999 5
Q ss_pred ----CEEEEEcCCCcEEEEECCCCeE-----eEEEeec-----CCceEEEEEe----cCCCE-EEEEeCCCcEEEEEccC
Q psy12614 82 ----DRLFSGGLQGFVNEYDMRRLNI-----KSSTAVT-----SGTCWCLSVH----KKKRL-LAAGTEQGHINLFQISD 142 (708)
Q Consensus 82 ----~~l~s~~~d~~i~vwd~~~~~~-----~~~~~~~-----~~~v~~~~~s----~~~~~-la~~~~d~~i~iwd~~~ 142 (708)
++|++++.||.|++||+.+++. ...+..| ...|.+++|+ |++++ |++++.||.|++||+.+
T Consensus 78 g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 157 (397)
T 1sq9_A 78 AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHP 157 (397)
T ss_dssp TEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEES
T ss_pred CccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCc
Confidence 6899999999999999999887 8888888 5899999999 99999 99999999999999988
Q ss_pred ------CcEEE---EEec-------ccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCC---
Q psy12614 143 ------EGLLY---EKLL-------DRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSK--- 202 (708)
Q Consensus 143 ------~~~~~---~~~~-------~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~--- 202 (708)
++... ...+ ..|...|.+++|+|++ +|++++.+ .|++||+++++.+..+.... .|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~h~~~ 232 (397)
T 1sq9_A 158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQH----SMINN 232 (397)
T ss_dssp SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC-------CC
T ss_pred cccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccc----ccccc
Confidence 54431 0033 4578899999999999 99999999 99999999999888876411 14
Q ss_pred ceeEEEEEEccCCE-EEEEcCC---CcEEEEeCCCCeeEEEeec-------------cccCeEEEEEeCCCCEEEEEecC
Q psy12614 203 NTAVWCVAFCADFT-IITGDSG---GFVRFWDGKTGVQWSDVKT-------------HKKDILALTVSEDENYLYCAGVD 265 (708)
Q Consensus 203 ~~~v~~~~~~~~~~-l~~~~~d---g~i~~wd~~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~~~~~d 265 (708)
...+.+++|+|++. +++++.| |.|++||+.+++.+..+.+ |...|.+++|+|++++|++++.|
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 312 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 312 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC
Confidence 67899999999995 8899999 9999999999999999998 99999999999999999999999
Q ss_pred CeEEEEEccCCcccccCCCCCCCCcceEEeEEEe------cc---------------ccceEEEEEe--C----------
Q psy12614 266 PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV------IH---------------EGDVKSLALH--G---------- 312 (708)
Q Consensus 266 g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~---------------~~~v~~l~~~--~---------- 312 (708)
|.|++||+.+ ++ ....+. .| ...|.+++|+ +
T Consensus 313 g~i~iwd~~~--------~~--------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~ 376 (397)
T 1sq9_A 313 GKLRFWDVKT--------KE--------RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLN 376 (397)
T ss_dssp SEEEEEETTT--------TE--------EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTS
T ss_pred CeEEEEEcCC--------Cc--------eeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccccccc
Confidence 9999999988 64 566666 67 8999999999 4
Q ss_pred CEEEEEcCCCeEEEEeCCCC
Q psy12614 313 NRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 313 ~~l~s~~~d~~i~iw~~~~~ 332 (708)
.+|++++.|+.|++|++.++
T Consensus 377 ~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 377 ESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CEEEEEETTTEEEEEEEEC-
T ss_pred ceEEEecCCCcEEEEEcCCC
Confidence 69999999999999998654
No 49
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.1e-36 Score=306.22 Aligned_cols=307 Identities=18% Similarity=0.274 Sum_probs=245.2
Q ss_pred cEEEEeCCCCCeEEE---EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCC-----------
Q psy12614 49 SIEIWDISETPHVDR---VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSG----------- 112 (708)
Q Consensus 49 ~v~iwd~~~~~~~~~---~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~----------- 112 (708)
...+|+....+.... ...+|. ..|.+++|+ |++|++++ ++++++|++.+++.+..+..|..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~ 117 (393)
T 1erj_A 41 YYILYNPALPREIDVELHKSLDHT--SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTS 117 (393)
T ss_dssp CEEEECTTSCCCEEEEEEEEEECS--SCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC--------------
T ss_pred eEEEECCCCCcccCceeEEecCCC--CEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCcccccccccccccc
Confidence 455777665443211 223688 999999999 88888876 78999999999998888765532
Q ss_pred -------ceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcC
Q psy12614 113 -------TCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIH 184 (708)
Q Consensus 113 -------~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~ 184 (708)
.|.+++|+|++++||+|+.|+.|++||+.+++.. ..+.+|...|.+++|+|++++|++++.| .|++||+.
T Consensus 118 ~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~--~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~ 195 (393)
T 1erj_A 118 SSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIV--MILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR 195 (393)
T ss_dssp ---CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE--EEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECC
Confidence 4999999999999999999999999999999876 7789999999999999999999999999 99999999
Q ss_pred CCceEEEEEecccCCCCCceeEEEEEEcc-CCE-EEEEcCCCcEEEEeCCCCeeEEEe-------eccccCeEEEEEeCC
Q psy12614 185 KGHAIHKMSLDKSSKFSKNTAVWCVAFCA-DFT-IITGDSGGFVRFWDGKTGVQWSDV-------KTHKKDILALTVSED 255 (708)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~dg~i~~wd~~~~~~~~~~-------~~~~~~i~~~~~s~~ 255 (708)
+++....+.. ...+.+++|+| +++ +++++.||.|++||+++++.+..+ .+|...|.+++|+|+
T Consensus 196 ~~~~~~~~~~--------~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 196 TGQCSLTLSI--------EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp TTEEEEEEEC--------SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred CCeeEEEEEc--------CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 9988777653 56799999999 775 899999999999999999887776 578999999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 256 ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 256 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+++|++++.|+.|++||+.......... ..........+.+|...|.+++++ +.+|++++.|+.|++||+.+..
T Consensus 268 g~~l~s~s~d~~v~~wd~~~~~~~~~~~----~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 268 GQSVVSGSLDRSVKLWNLQNANNKSDSK----TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp SSEEEEEETTSEEEEEEC-------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCCccccc----CCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe
Confidence 9999999999999999998611100000 000011345677888999999998 7889999999999888875432
Q ss_pred eeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCC
Q psy12614 334 LVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSN 413 (708)
Q Consensus 334 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 413 (708)
......+|...|.++++++
T Consensus 344 -------------------------------------------------------------~~~~l~~h~~~v~~v~~~~ 362 (393)
T 1erj_A 344 -------------------------------------------------------------PLLMLQGHRNSVISVAVAN 362 (393)
T ss_dssp -------------------------------------------------------------EEEEEECCSSCEEEEEECS
T ss_pred -------------------------------------------------------------EEEEECCCCCCEEEEEecC
Confidence 2233346888899999875
Q ss_pred ------CCcEEEEE-cCCceEEEEEEe
Q psy12614 414 ------DGKYVAYS-TESCVRLHSLDL 433 (708)
Q Consensus 414 ------~g~~l~~~-~d~~i~i~~~~~ 433 (708)
++.+|+++ .|++|++|++..
T Consensus 363 ~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 363 GSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp SCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred CcCcCCCCCEEEEECCCCcEEECcccc
Confidence 78899985 599999999975
No 50
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.1e-36 Score=305.26 Aligned_cols=313 Identities=13% Similarity=0.168 Sum_probs=245.6
Q ss_pred EEeCCCc--EEEEeCCCCC-eEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCCCe-----EeEEEeecC
Q psy12614 43 VSRADQS--IEIWDISETP-HVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRRLN-----IKSSTAVTS 111 (708)
Q Consensus 43 ~~~~dg~--v~iwd~~~~~-~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~~-----~~~~~~~~~ 111 (708)
+|...|+ +.++...+.+ .++.+|.||. +.|++|+|+ +++|+||+.|++|++||+.+.+ +...+.+|.
T Consensus 9 ~g~d~g~~~~~~~~~~~~~~~l~~tL~GH~--~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~ 86 (340)
T 4aow_A 9 SGVDLGTENLYFQSMMTEQMTLRGTLKGHN--GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 86 (340)
T ss_dssp -----------------CEEEEEEEECCCS--SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCS
T ss_pred cccCCCCccEEEEEccCCceEEEEEECCcc--CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCC
Confidence 4444444 4444444433 2345899999 999999999 5799999999999999987643 567888999
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEE
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIH 190 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~ 190 (708)
..|.+++|+|++++|++++.|+.|++|+....... .....+...+..+.+++++++|++++.| .+++||+.......
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~ 164 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT 164 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE
T ss_pred CCEEEEEECCCCCEEEEEcccccceEEeeccccee--eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEE
Confidence 99999999999999999999999999999988876 5566778889999999999999999999 99999987665443
Q ss_pred EEEecccCCCCCceeEEEEEEccCC---EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCe
Q psy12614 191 KMSLDKSSKFSKNTAVWCVAFCADF---TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPT 267 (708)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~---~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 267 (708)
.... .+...+..++|++++ .+++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.||.
T Consensus 165 ~~~~------~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~ 238 (340)
T 4aow_A 165 VQDE------SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ 238 (340)
T ss_dssp ECSS------SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred EEec------cccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCe
Confidence 3222 347889999999876 2789999999999999999999999999999999999999999999999999
Q ss_pred EEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCce
Q psy12614 268 VVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTP 346 (708)
Q Consensus 268 i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 346 (708)
|++||+.+ ++ ....+. +...|.+++++ +..+++++.|+.|++||+++.....
T Consensus 239 i~iwd~~~--------~~--------~~~~~~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~---------- 291 (340)
T 4aow_A 239 AMLWDLNE--------GK--------HLYTLD-GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVD---------- 291 (340)
T ss_dssp EEEEETTT--------TE--------EEEEEE-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEE----------
T ss_pred EEEEEecc--------Cc--------eeeeec-CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEE----------
Confidence 99999998 53 344444 45678999998 7778888889999999987654211
Q ss_pred EEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCc
Q psy12614 347 VSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESC 425 (708)
Q Consensus 347 ~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~ 425 (708)
.+... ........|...|.+++|+|||++|+++ .||.
T Consensus 292 ---------------------~~~~~---------------------~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~ 329 (340)
T 4aow_A 292 ---------------------ELKQE---------------------VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNL 329 (340)
T ss_dssp ---------------------EECCC----------------------------CCCCCEEEEEECTTSSEEEEEETTSC
T ss_pred ---------------------ecccc---------------------ceeeeccCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 11110 1222234678899999999999999985 5999
Q ss_pred eEEEEEEec
Q psy12614 426 VRLHSLDLD 434 (708)
Q Consensus 426 i~i~~~~~~ 434 (708)
|+||++.++
T Consensus 330 v~iW~~~tG 338 (340)
T 4aow_A 330 VRVWQVTIG 338 (340)
T ss_dssp EEEEEEEC-
T ss_pred EEEEeCCCc
Confidence 999999874
No 51
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.5e-37 Score=304.65 Aligned_cols=241 Identities=13% Similarity=0.155 Sum_probs=209.1
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEE---EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEEC
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVD---RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~---~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~ 98 (708)
.|...|++++|+|++ .|++|+.||+|+|||+.+++.+. ..+.+|. ..|.+++|+ +++|++++.|++|++||+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~--~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHD--DIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCS--SCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCC--CCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 356789999999995 68899999999999999887543 2456899 999999999 899999999999999999
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC-CCEEEEecCC
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS-GDYLVTGCAA 176 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~d 176 (708)
++++++..+.+|.+.|.+++|+|++. +|++++.|+.|++||+++++.........+...+.+++|+|+ +++|++++.|
T Consensus 157 ~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 157 AQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp TTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT
T ss_pred CCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC
Confidence 99999999999999999999999985 789999999999999999987743334456678999999995 5788999999
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-E-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEe
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-T-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s 253 (708)
.|++||+++++.+..+. .|...|++++|+|++ + +++|+.|+.|++||+.+++.+ .+.+|.+.|.+++|+
T Consensus 237 g~v~~wd~~~~~~~~~~~-------~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~s 308 (344)
T 4gqb_B 237 GTVSLVDTKSTSCVLSSA-------VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWS 308 (344)
T ss_dssp SEEEEEESCC--CCEEEE-------CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEEC
T ss_pred CcEEEEECCCCcEEEEEc-------CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEe
Confidence 99999999999988886 348899999999998 4 889999999999999988765 567899999999999
Q ss_pred CCCC-EEEEEecCCeEEEEEccC
Q psy12614 254 EDEN-YLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 254 ~~~~-~l~~~~~dg~i~iw~~~~ 275 (708)
|+++ +|++++.|+.|++|++.+
T Consensus 309 p~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 309 PLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp SSSTTEEEEEETTSCEEEEECCC
T ss_pred CCCCeEEEEEcCCCeEEEEECCC
Confidence 9986 567899999999999987
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.4e-36 Score=301.37 Aligned_cols=277 Identities=15% Similarity=0.304 Sum_probs=246.5
Q ss_pred ccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEE--EEEe--cCCCCCcEEEEEEe--CCEEEEEcCCCcEEE
Q psy12614 22 YAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVD--RVFI--GDPLSNSIECLTWF--NDRLFSGGLQGFVNE 95 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~--~~~~--~h~~~~~v~~l~~~--~~~l~s~~~d~~i~v 95 (708)
..+|.+.|++++|+|++++|++++ ||.|++||+.++.... ..+. +|. ..|.+++|+ +++|++++.|+.|++
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRD--NYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTT--SBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCC--CcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 347999999999999999999998 9999999998764321 1333 777 999999999 889999999999999
Q ss_pred EECCCCe--EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEe
Q psy12614 96 YDMRRLN--IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG 173 (708)
Q Consensus 96 wd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~ 173 (708)
||+.+++ ....+..|...|.+++|+|++++|++++.|+.|++||+.+++.. ..+..|...|.+++|+|++++|+++
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~ 201 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV--RQFQGHTDGASCIDISNDGTKLWTG 201 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCcee--eeeecccCceEEEEECCCCCEEEEE
Confidence 9999987 66778899999999999999999999999999999999998876 6788899999999999999999999
Q ss_pred cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEE
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALT 251 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~ 251 (708)
+.+ .|++||+.+++.+..+.. ...+.+++|+|++. +++++.+|.|++||+.+++.. .+..|...|.+++
T Consensus 202 ~~dg~i~~~d~~~~~~~~~~~~--------~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~ 272 (337)
T 1gxr_A 202 GLDNTVRSWDLREGRQLQQHDF--------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLK 272 (337)
T ss_dssp ETTSEEEEEETTTTEEEEEEEC--------SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEE
T ss_pred ecCCcEEEEECCCCceEeeecC--------CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEE
Confidence 999 999999999988877642 67799999999995 889999999999999887754 5677999999999
Q ss_pred EeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 252 VSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 252 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
|+|++++|++++.||.|++|++.+ ++ .. ....|...|.+++|+ +++|++++.||.|++|++
T Consensus 273 ~~~~~~~l~~~~~dg~i~~~~~~~--------~~--------~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 273 FAYCGKWFVSTGKDNLLNAWRTPY--------GA--------SI-FQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTT--------CC--------EE-EEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEecCCCcEEEEECCC--------Ce--------EE-EEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 999999999999999999999998 64 22 345688999999999 889999999999999986
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.1e-37 Score=310.12 Aligned_cols=301 Identities=14% Similarity=0.207 Sum_probs=248.4
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC--eEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETP--HVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~--~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
++..|.+.|++++|+|++++||+|+.||.|+|||+.+++ .+. .+.+|. ..|.+++|+ +++|++++.||.|++|
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~-~~~~h~--~~v~~~~~~~~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVH-ELKEHN--GQVTGVDWAPDSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEE-EEECCS--SCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeee-eecCCC--CcccEEEEeCCCCEEEEEcCCCeEEEE
Confidence 455699999999999999999999999999999999886 554 888999 999999999 8999999999999999
Q ss_pred ECCCCeEeEEE--eecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE--EEEEecccccccEEEEEECCCCCEEEE
Q psy12614 97 DMRRLNIKSST--AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL--LYEKLLDRQQGRILCTAWHSSGDYLVT 172 (708)
Q Consensus 97 d~~~~~~~~~~--~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~~ 172 (708)
|+.+++....+ ..|...|.+++|+|++++|++++.|+.|++||+..+.. .......+|...|.+++|+|++++|++
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence 99998755444 57899999999999999999999999999999998762 112445678999999999999999999
Q ss_pred ecCC-eEEEEEcC------------------CCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCC
Q psy12614 173 GCAA-AVRVWDIH------------------KGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGK 232 (708)
Q Consensus 173 ~~~d-~i~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~ 232 (708)
++.| .|++||+. .++.+..+. .+...+.+++|+|++. +++++.||.|++||++
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 232 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-------SSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 232 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-------CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecC-------CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 9999 99999954 566666654 3378899999999994 9999999999999999
Q ss_pred CCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC--CcccccCCCCCCC----------------CcceEE
Q psy12614 233 TGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR--KPQVCSTSGPEQG----------------SSVWVR 294 (708)
Q Consensus 233 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~--~~~~~~~~g~~~~----------------~~~~~~ 294 (708)
+++.+..+..|...|.+++|+|++++|+++ .|+.|++|++.. +.-.+...-.... ......
T Consensus 233 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (372)
T 1k8k_C 233 KKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASS 311 (372)
T ss_dssp GTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--
T ss_pred CCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccccccc
Confidence 999999999999999999999999888877 899999999976 2100000000000 000001
Q ss_pred e------EEE-eccccceEEEEEe---C---CEEEEEcCCCeEEEEeCCCC
Q psy12614 295 S------VNR-VIHEGDVKSLALH---G---NRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 295 ~------~~~-~~~~~~v~~l~~~---~---~~l~s~~~d~~i~iw~~~~~ 332 (708)
. ..+ .+|...|.+++|. + .+|++++.||.|++|++.+.
T Consensus 312 ~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 312 EGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp -------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred ccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 0 222 4899999999966 4 89999999999999998654
No 54
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-36 Score=296.76 Aligned_cols=283 Identities=14% Similarity=0.198 Sum_probs=251.6
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEE
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVN 94 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~ 94 (708)
+..+.+.+|.+.|++++| |++++||+|+.||.|++||+.+++... .+..|. ..|.+++|+ +++|++++.||.|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~-~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGT-VVYTGQ--GFLNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEE-EEEECS--SCEEEEEEETTTTEEEEEETTSCEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEE-EeecCC--ccEEEEEECCCCCEEEEecCCCeEE
Confidence 455678999999999999 999999999999999999998877665 888898 999999999 99999999999999
Q ss_pred EEECCCC---eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC-CCCEE
Q psy12614 95 EYDMRRL---NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS-SGDYL 170 (708)
Q Consensus 95 vwd~~~~---~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l 170 (708)
+|++... +....+..|...|.+++| ++++|++++.|+.|++|| .++.. ..+..|...+.+++|+| +++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~--~~~~~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLV--YNLQAHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEE--EEEECCSSCEEEEEEEETTTTEE
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEE--EecccCCCceeEEEEccCCCCEE
Confidence 9998764 567788899999999999 577999999999999999 45544 67778999999999988 99999
Q ss_pred EEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEE
Q psy12614 171 VTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILA 249 (708)
Q Consensus 171 ~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~ 249 (708)
++++.+ .|++|| .++....+... +...+.+++|+|++.+++++.+|.|++||+++++.+..+.+|...|.+
T Consensus 159 ~~~~~d~~i~i~d--~~~~~~~~~~~------~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~ 230 (313)
T 3odt_A 159 LTASADKTIKLWQ--NDKVIKTFSGI------HNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYC 230 (313)
T ss_dssp EEEETTSCEEEEE--TTEEEEEECSS------CSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred EEEECCCCEEEEe--cCceEEEEecc------CcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEE
Confidence 999999 999999 45555555432 388899999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEe
Q psy12614 250 LTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSY 328 (708)
Q Consensus 250 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~ 328 (708)
++|+|++ .|++++.||.|++||+.+ ++ ....+..|...|.+++|+ ...+++++.|+.|++|+
T Consensus 231 ~~~~~~~-~l~~~~~dg~v~iwd~~~--------~~--------~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 231 IKLLPNG-DIVSCGEDRTVRIWSKEN--------GS--------LKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFS 293 (313)
T ss_dssp EEECTTS-CEEEEETTSEEEEECTTT--------CC--------EEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEE
T ss_pred EEEecCC-CEEEEecCCEEEEEECCC--------Cc--------eeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEe
Confidence 9999999 688999999999999998 76 677888999999999999 44478899999999999
Q ss_pred CCCCce
Q psy12614 329 YPPKTL 334 (708)
Q Consensus 329 ~~~~~~ 334 (708)
+.+...
T Consensus 294 ~~~~~~ 299 (313)
T 3odt_A 294 QEKSRW 299 (313)
T ss_dssp SCGGGC
T ss_pred CCCCce
Confidence 987653
No 55
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.4e-36 Score=330.16 Aligned_cols=286 Identities=16% Similarity=0.212 Sum_probs=243.2
Q ss_pred eeeeccCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCC----eEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC
Q psy12614 18 NIKFYAPEPKVINCIACEPKS-SRLAVSRADQSIEIWDISETP----HVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ 90 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~-~~la~~~~dg~v~iwd~~~~~----~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d 90 (708)
....+.+|.+.|++++|+|++ ++|++|+.||+|+|||+.+.. .....+.+|. ..|.+++|+ +++|++++.|
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~--~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHS--HFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCS--SCEEEEEECTTSSEEEEEETT
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCC--CcEEEEEECCCCCEEEEEeCC
Confidence 345688999999999999875 799999999999999997642 2335889999 999999999 8999999999
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEE-EEecccccccEEEEEECCCC--
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLY-EKLLDRQQGRILCTAWHSSG-- 167 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~s~d~-- 167 (708)
|+|++||+.+++....+.+|...|.+++|+|++++|++++.|++|++||........ .....+|...|.+++|+|++
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence 999999999999999999999999999999999999999999999999987654321 11235688899999999987
Q ss_pred CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeecccc
Q psy12614 168 DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKK 245 (708)
Q Consensus 168 ~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~ 245 (708)
..|++++.| .|++||+.+++....+. +|...|++++|+|+++ +++++.||.|++||+.+++.+..+. +..
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~-------~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~ 603 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLA-------GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANS 603 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSS
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEc-------CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCC
Confidence 689999999 99999999998887765 3488999999999995 8999999999999999999988876 457
Q ss_pred CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe-------------------ccccceE
Q psy12614 246 DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-------------------IHEGDVK 306 (708)
Q Consensus 246 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------------------~~~~~v~ 306 (708)
.|.+++|+|++.+|++++ ++.|++||+.+ ++ ....+. .+...+.
T Consensus 604 ~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~--------~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (694)
T 3dm0_A 604 VIHALCFSPNRYWLCAAT-EHGIKIWDLES--------KS--------IVEDLKVDLKAEAEKADNSGPAATKRKVIYCT 666 (694)
T ss_dssp CEEEEEECSSSSEEEEEE-TTEEEEEETTT--------TE--------EEEEECCCCC----------------CCCCEE
T ss_pred cEEEEEEcCCCcEEEEEc-CCCEEEEECCC--------CC--------ChhhhccccccccccccccccccCCceeEEee
Confidence 899999999998877665 66799999988 32 111111 1222478
Q ss_pred EEEEe--CCEEEEEcCCCeEEEEeCC
Q psy12614 307 SLALH--GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 307 ~l~~~--~~~l~s~~~d~~i~iw~~~ 330 (708)
+++|+ +.+|++|+.||.|++|++.
T Consensus 667 ~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 667 SLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred eEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 89999 8999999999999999985
No 56
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.5e-35 Score=304.08 Aligned_cols=322 Identities=19% Similarity=0.329 Sum_probs=269.4
Q ss_pred EEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC
Q psy12614 63 RVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD 142 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~ 142 (708)
..+.+|. ...+.++.+++++|++++.||+|++||+.+++.+..+.+|.+.|++++|+ +++|++|+.||.|++||+.+
T Consensus 112 ~~l~~h~-~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~ 188 (445)
T 2ovr_B 112 KVLKGHD-DHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET 188 (445)
T ss_dssp EEEECST-TSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT
T ss_pred EEecccC-CCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc
Confidence 3789998 33468888889999999999999999999999999999999999999998 56999999999999999999
Q ss_pred CcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEE
Q psy12614 143 EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITG 220 (708)
Q Consensus 143 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~ 220 (708)
++.. ..+.+|...|.++.|+ ++.+++++.| .|++||+.+++.+..+.. +...+.+++| ++ .++++
T Consensus 189 ~~~~--~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~-------~~~~v~~~~~--~~~~l~~~ 255 (445)
T 2ovr_B 189 GECI--HTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMG-------HVAAVRCVQY--DGRRVVSG 255 (445)
T ss_dssp TEEE--EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEEC-------CSSCEEEEEE--CSSCEEEE
T ss_pred CcEE--EEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcC-------CcccEEEEEE--CCCEEEEE
Confidence 9887 7788999999999995 6789999999 999999999999888763 3788999999 44 59999
Q ss_pred cCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec
Q psy12614 221 DSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI 300 (708)
Q Consensus 221 ~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 300 (708)
+.||.|++||+++++.+..+.+|...|.+++| +++++++++.||.|++||+.+ ++ ....+.+
T Consensus 256 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~--------~~--------~~~~~~~ 317 (445)
T 2ovr_B 256 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET--------GN--------CIHTLTG 317 (445)
T ss_dssp ETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTT--------CC--------EEEEECC
T ss_pred cCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCC--------CC--------EEEEEcC
Confidence 99999999999999999999999999999999 788999999999999999998 76 6777889
Q ss_pred cccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCC
Q psy12614 301 HEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSH 380 (708)
Q Consensus 301 ~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~ 380 (708)
|...+.++.++++.+++++.||.|++||+.+..... .+...
T Consensus 318 ~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~-------------------------------~~~~~-------- 358 (445)
T 2ovr_B 318 HQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQ-------------------------------TLQGP-------- 358 (445)
T ss_dssp CCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEE-------------------------------EECST--------
T ss_pred CcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEE-------------------------------EEccC--------
Confidence 999999999999999999999999999986543110 11100
Q ss_pred CCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEEEEecCCcceeEEeecCCcccccceeEEEE
Q psy12614 381 SNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVL 459 (708)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 459 (708)
..+...|.+++++ +++++++ .||.|++|++.+++ .+..+...........|.+++
T Consensus 359 -------------------~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~v~~~~ 414 (445)
T 2ovr_B 359 -------------------NKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE---FIRNLVTLESGGSGGVVWRIR 414 (445)
T ss_dssp -------------------TSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC---EEEEEEECTTGGGTCEEEEEE
T ss_pred -------------------CCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCc---eeeeeeccccCCCCceEEEEE
Confidence 1366789999995 5688875 59999999988632 333321122111144788899
Q ss_pred EecCCCeEEEEecCCc------EEEecC
Q psy12614 460 ISADSTLLLAVSLNGP------LYIIDL 481 (708)
Q Consensus 460 ~s~d~~~l~~~~~dg~------i~~~~~ 481 (708)
|+|++.++++++.||. +|+++.
T Consensus 415 ~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 415 ASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp ECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred ecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 9999999999999995 566543
No 57
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.5e-35 Score=308.88 Aligned_cols=314 Identities=15% Similarity=0.243 Sum_probs=260.5
Q ss_pred eeeccCCCCcE-EEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEE
Q psy12614 19 IKFYAPEPKVI-NCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 19 ~~~~~~h~~~v-~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vw 96 (708)
...+.+|.+.| +|+++ ++++|++|+.||.|++||+.+++.+. .+.+|. +.|.+++|+ +..|++++.||+|++|
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~-~~~~h~--~~V~~l~~~~~~~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLL-QLSGHD--GGVWALKYAHGGILVSGSTDRTVRVW 188 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEE-EECCCS--SCEEEEEECSTTEEEEEETTSCEEEE
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEE-EEeCCC--cCEEEEEEcCCCEEEEEeCCCCEEEE
Confidence 44678898885 66666 56799999999999999999998876 899999 999999999 6699999999999999
Q ss_pred ECCCCeEeEEEeecCCceEEEEEe--cCCCEEEEEeCCCcEEEEEccCCcEE---------------------EEEeccc
Q psy12614 97 DMRRLNIKSSTAVTSGTCWCLSVH--KKKRLLAAGTEQGHINLFQISDEGLL---------------------YEKLLDR 153 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~s--~~~~~la~~~~d~~i~iwd~~~~~~~---------------------~~~~~~~ 153 (708)
|+++++++..+.+|.+.|.+++|+ ++++++++++.|+.|++||+.++... ....+.+
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 999999999999999999999999 57889999999999999999876532 1246778
Q ss_pred ccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeC
Q psy12614 154 QQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDG 231 (708)
Q Consensus 154 ~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~ 231 (708)
|...+.++ +++++++++++.| .|++||+.+++.+..+. .|...|.+++|+|++. +++++.||.|++||+
T Consensus 269 ~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 269 HMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILS-------GHTDRIYSTIYDHERKRCISASMDTTIRIWDL 339 (464)
T ss_dssp CSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred ccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEec-------CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 88888887 5789999999999 99999999999888875 3388899999999984 999999999999999
Q ss_pred CCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe
Q psy12614 232 KTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 232 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
++++.+..+.+|...|.+++|+ +++|++++.||.|++||+.+ +. ... ...+...+..++++
T Consensus 340 ~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~--------~~--------~~~-~~~~~~~~~~~~~~ 400 (464)
T 3v7d_B 340 ENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDAND--------YS--------RKF-SYHHTNLSAITTFY 400 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT--------CC--------EEE-EEECTTCCCEEEEE
T ss_pred CCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCC--------Cc--------eee-eecCCCCccEEEEE
Confidence 9999999999999999999997 47999999999999999998 53 222 22355666777777
Q ss_pred --CCEEEEEcCCCeEEEEeCCCCceee--cCccCCCCceEEEEcCCcEEEEE-cCCeEEEE
Q psy12614 312 --GNRLYSGGLDSYLSLSYYPPKTLVK--YPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELW 367 (708)
Q Consensus 312 --~~~l~s~~~d~~i~iw~~~~~~~~~--~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~ 367 (708)
+.++++++ |+.|++||+.++.+.. ...+......++++ +..+++++ .++.+.+|
T Consensus 401 ~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 401 VSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp ECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred eCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 78888887 9999999999887544 23333444566776 33344443 55655444
No 58
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-38 Score=326.01 Aligned_cols=356 Identities=10% Similarity=0.104 Sum_probs=266.4
Q ss_pred CcEEEEEEe--CC-EEEEE----------cCCCcEEEEECCCCe---EeEEEeecCCceEEEEEecCCCEEEEEeCCCcE
Q psy12614 72 NSIECLTWF--ND-RLFSG----------GLQGFVNEYDMRRLN---IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHI 135 (708)
Q Consensus 72 ~~v~~l~~~--~~-~l~s~----------~~d~~i~vwd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i 135 (708)
..|.+++|+ +. +|+++ +.|+.|++||+.++. ++..+ .|...|.+++|+|++++|++++.|+.|
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeE
Confidence 457788999 55 88898 889999999999876 33333 588999999999999999999999999
Q ss_pred EEEEccC----CcEEEEEecccccccEEEEEECCC-CCEEEEecCC-eEEEEEcCCCc------eEEEEEecccCCCCCc
Q psy12614 136 NLFQISD----EGLLYEKLLDRQQGRILCTAWHSS-GDYLVTGCAA-AVRVWDIHKGH------AIHKMSLDKSSKFSKN 203 (708)
Q Consensus 136 ~iwd~~~----~~~~~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~d-~i~iwd~~~~~------~~~~~~~~~~~~~~~~ 203 (708)
++||+.+ .+.. ..+.+|...|.+++|+|+ +++|++++.| .|++||+.+++ ....+... . .+.
T Consensus 92 ~vw~~~~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-~---~~~ 165 (416)
T 2pm9_A 92 ELYSTNEANNAINSM--ARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS-M---SSV 165 (416)
T ss_dssp EEECCSSTTSCCCEE--EECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS-C---CSS
T ss_pred EEeecccccccccch--hhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccc-c---CCC
Confidence 9999987 3344 778899999999999998 8999999999 99999999876 33222111 1 347
Q ss_pred eeEEEEEEccC-C-EEEEEcCCCcEEEEeCCCCeeEEEeecc------ccCeEEEEEeCCC-CEEEEEecCC---eEEEE
Q psy12614 204 TAVWCVAFCAD-F-TIITGDSGGFVRFWDGKTGVQWSDVKTH------KKDILALTVSEDE-NYLYCAGVDP---TVVCF 271 (708)
Q Consensus 204 ~~v~~~~~~~~-~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~------~~~i~~~~~s~~~-~~l~~~~~dg---~i~iw 271 (708)
..|.+++|+|+ + .+++++.||.|++||+++++.+..+..+ ...|.+++|+|++ .++++++.|+ .|++|
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 88999999998 4 4899999999999999999998888776 7899999999997 6899999998 99999
Q ss_pred EccCCcccccCCCCCCCCcceEEeEEEe-ccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceE
Q psy12614 272 QRTRKPQVCSTSGPEQGSSVWVRSVNRV-IHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPV 347 (708)
Q Consensus 272 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 347 (708)
|+.+ +. .....+. +|...|.+++|+ +.+|++++.|+.|++||+.+..
T Consensus 246 d~~~--------~~-------~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~-------------- 296 (416)
T 2pm9_A 246 DLRN--------AN-------TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE-------------- 296 (416)
T ss_dssp ETTS--------TT-------SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC--------------
T ss_pred eCCC--------CC-------CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc--------------
Confidence 9987 42 0234455 789999999996 7889999999999998875432
Q ss_pred EEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCC-cEEEEEc-CCc
Q psy12614 348 SLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDG-KYVAYST-ESC 425 (708)
Q Consensus 348 ~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~~-d~~ 425 (708)
.......|...|.+++|+|++ .+|+++. |+.
T Consensus 297 -----------------------------------------------~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~ 329 (416)
T 2pm9_A 297 -----------------------------------------------QLSQFPARGNWCFKTKFAPEAPDLFACASFDNK 329 (416)
T ss_dssp -----------------------------------------------EEEEEECSSSCCCCEEECTTCTTEEEECCSSSE
T ss_pred -----------------------------------------------cceeecCCCCceEEEEECCCCCCEEEEEecCCc
Confidence 222333677889999999999 7888854 999
Q ss_pred eEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCcEEEecCCCeEEEEEecCCCCCccCcceEEE
Q psy12614 426 VRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLV 505 (708)
Q Consensus 426 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 505 (708)
|++|++........... ... ........+.+.+..++..+..+. +.+ .....+ ...+..+
T Consensus 330 i~iw~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~--~~~~~~~ 389 (416)
T 2pm9_A 330 IEVQTLQNLTNTLDEQE---TET---KQQESETDFWNNVSREESKEKPSV-FHL-----------QAPTWY--GEPSPAA 389 (416)
T ss_dssp EEEEESCCCCCSSCC----------------------------CCSCCCS-SCC-----------CCCSTT--CCCSCCC
T ss_pred EEEEEccCCCCCccccc---ccc---cccCCccccccccccccccccccc-ccc-----------cCCccc--cCCccce
Confidence 99999987443221111 000 001111334444444442222211 111 223344 6678899
Q ss_pred EECCCCcEEEEEecCCeEEEEECCc
Q psy12614 506 QMSECKQYIVCADRKSHVVIWKNGQ 530 (708)
Q Consensus 506 ~~s~~~~~l~~~~~d~~i~iw~~~~ 530 (708)
+|+|||++||+++.|+.|+||++.+
T Consensus 390 ~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 390 HWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp EEETTTEEECBCTTSSCBCCBCCCC
T ss_pred EEeeCCeEEEEeCCCCeEEEEEecc
Confidence 9999999999999999999999863
No 59
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.1e-36 Score=305.57 Aligned_cols=280 Identities=16% Similarity=0.249 Sum_probs=235.6
Q ss_pred eeeeccCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCeEEEEEe--cCCCCCcEEEEEEe---CCEEEEEcCCC
Q psy12614 18 NIKFYAPEPKVINCIACEPKS-SRLAVSRADQSIEIWDISETPHVDRVFI--GDPLSNSIECLTWF---NDRLFSGGLQG 91 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~-~~la~~~~dg~v~iwd~~~~~~~~~~~~--~h~~~~~v~~l~~~---~~~l~s~~~d~ 91 (708)
..+.+.+|.+.|++++|+|++ ++||+|+.||.|+|||+.+++... .+. +|. ..|.+++|+ +++|++++.|+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTS-FIQGMGPG--DAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEE-EECCCSTT--CBEEEEEEETTEEEEEEEEETTT
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccce-eeecCCcC--CceeEEEeCCCCCCEEEEEeCCC
Confidence 345678999999999999999 999999999999999999887765 444 688 999999998 58999999999
Q ss_pred cEEEEECCCCeEeEEEeec---CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCC
Q psy12614 92 FVNEYDMRRLNIKSSTAVT---SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD 168 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~---~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~ 168 (708)
.|++||+.+ .....+..+ ...|.+++|+|++++|++++.|+.|++||+. ++.. ..+..|...|.+++|+|+++
T Consensus 142 ~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~--~~~~~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 142 ATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEI--FKEKLHKAKVTHAEFNPRCD 217 (383)
T ss_dssp EEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEE--EEEECSSSCEEEEEECSSCT
T ss_pred EEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEE--EEeccCCCcEEEEEECCCCC
Confidence 999999996 555555544 4789999999999999999999999999995 4444 67888999999999999999
Q ss_pred -EEEEecCC-eEEEEEcCC----CceEEEEEecccCCCCCceeEEEEEEcc-CCE-EEEEcCCCcEEEEeCCCCeeEEEe
Q psy12614 169 -YLVTGCAA-AVRVWDIHK----GHAIHKMSLDKSSKFSKNTAVWCVAFCA-DFT-IITGDSGGFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 169 -~l~~~~~d-~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~dg~i~~wd~~~~~~~~~~ 240 (708)
+|++++.| .|++||+.+ +..+..+. +...|.+++|+| ++. +++++.|+.|++||+++++....+
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--------~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEMP--------HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEEE--------CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEec--------CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 99999999 999999998 55555552 278899999999 885 889999999999999988776666
Q ss_pred eccc-----------------cCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec--c
Q psy12614 241 KTHK-----------------KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI--H 301 (708)
Q Consensus 241 ~~~~-----------------~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~ 301 (708)
.+|. ..+..++|+|++++ +++.|+.|++||+.+ ++ ....+.+ |
T Consensus 290 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~--------~~--------~~~~l~~~~~ 351 (383)
T 3ei3_B 290 IIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANS--------GG--------LVHQLRDPNA 351 (383)
T ss_dssp EECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTT--------CC--------EEEEECBTTB
T ss_pred ccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCC--------Cc--------eeeeecCCCC
Confidence 5443 34445667777766 777899999999998 76 5666666 4
Q ss_pred ccceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 302 EGDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
...+..++|+ +.+|++++ |+.|++|++++
T Consensus 352 ~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 352 AGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 5677888999 88999997 99999999864
No 60
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-38 Score=328.98 Aligned_cols=338 Identities=13% Similarity=0.114 Sum_probs=245.4
Q ss_pred CCCCcEEEEEEcCCC---------CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 24 PEPKVINCIACEPKS---------SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~---------~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
.+.+.|.+++|+|++ ++||+|+.++.. . . .+ +..+++++.|++
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~------------------~--~------~~~~~~~laS~s~D~t 184 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD------------------E--P------LNEHLEMFDKEKHSSC 184 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC--------------------------------------------CEE
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccC------------------C--c------cchhhhhhccCCCCce
Confidence 367899999999987 799999866420 0 0 12 567899999999
Q ss_pred EEEEECCCCeEe----EEEeecCCceEEEEEecC------CCEEEEEeCCCcEEEEEccCCcEE---------EEEeccc
Q psy12614 93 VNEYDMRRLNIK----SSTAVTSGTCWCLSVHKK------KRLLAAGTEQGHINLFQISDEGLL---------YEKLLDR 153 (708)
Q Consensus 93 i~vwd~~~~~~~----~~~~~~~~~v~~~~~s~~------~~~la~~~~d~~i~iwd~~~~~~~---------~~~~~~~ 153 (708)
|+|||+.+++.. ..+..|.+.|++++|+|+ +.+||+++.||+|++||+.++... ....+.+
T Consensus 185 I~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~ 264 (524)
T 2j04_B 185 IQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL 264 (524)
T ss_dssp EEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC
T ss_pred EEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc
Confidence 999999887642 446778899999999997 579999999999999999876421 0135678
Q ss_pred ccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCce-EEEEEecccCCCCCceeEEEE--EEccCC-E-EEEEcCCCcEE
Q psy12614 154 QQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHA-IHKMSLDKSSKFSKNTAVWCV--AFCADF-T-IITGDSGGFVR 227 (708)
Q Consensus 154 ~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~-l~~~~~dg~i~ 227 (708)
|...|.+++|++++ .|++|+.| +|++||++++.. ...+. .|...|.++ +|+|++ + +++++.|++|+
T Consensus 265 h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~-------~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk 336 (524)
T 2j04_B 265 ADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQ-------VHDSYILSVSTAYSDFEDTVVSTVAVDGYFY 336 (524)
T ss_dssp TTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEE-------CSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred CCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEee-------cccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence 99999999999865 89999999 999999987743 33343 348889999 578887 5 89999999999
Q ss_pred EEeCCCCeeEEEeecccc--CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccce
Q psy12614 228 FWDGKTGVQWSDVKTHKK--DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDV 305 (708)
Q Consensus 228 ~wd~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v 305 (708)
+||+++++.+..+.+|.. .|.+++|+|+++.+++++.|+.|++||++. +. ....+.+|.+.|
T Consensus 337 lWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~--------~~--------~~~~l~gH~~~V 400 (524)
T 2j04_B 337 IFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA--------AF--------AVHPLVSRETTI 400 (524)
T ss_dssp EECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC--------TT--------CCEEEEECSSCE
T ss_pred EEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcc--------cc--------cceeeecCCCce
Confidence 999998887777766653 588999999999999999999999999988 65 446677899999
Q ss_pred EEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccC--C---CCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCC
Q psy12614 306 KSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTL--A---QSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLS 378 (708)
Q Consensus 306 ~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~--~---~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~ 378 (708)
.+++|+ +..|++|+.|++|++|++....+....... . ....++++|+++.+....+ ..+|....
T Consensus 401 ~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~--~~~~~~~~------- 471 (524)
T 2j04_B 401 TAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSS--YEVYPLTV------- 471 (524)
T ss_dssp EEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCC--CCCCC----------
T ss_pred EEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCC--ceeccccc-------
Confidence 999999 889999999999999998765433221000 0 1236788899885533222 22222210
Q ss_pred CCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc---EEEEEc-CCceEEEEEEe
Q psy12614 379 SHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK---YVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~---~l~~~~-d~~i~i~~~~~ 433 (708)
.........+|...|.+++|+|++. ++|+|. +|.|+||++..
T Consensus 472 -------------~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 472 -------------NDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp -----------------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred -------------CCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 0123444557889999999999964 999977 89999999874
No 61
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.6e-36 Score=294.95 Aligned_cols=246 Identities=15% Similarity=0.234 Sum_probs=211.4
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--CeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcE
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISET--PHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFV 93 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~--~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i 93 (708)
.++.+|.+.|++++|+|+|++||+|+.|++|+|||+.++ +.+. .+.+|. ++|.+++|+ +++|++++.|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~-~l~gH~--~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLID-TLTGHE--GPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCE-EECCCS--SCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEE-EEcccc--CCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 467899999999999999999999999999999999753 4444 899999 999999996 6899999999999
Q ss_pred EEEECCCCe--EeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC---
Q psy12614 94 NEYDMRRLN--IKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS--- 166 (708)
Q Consensus 94 ~vwd~~~~~--~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d--- 166 (708)
++||+++++ .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||+.++.......+.+|...|.+++|+|+
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccc
Confidence 999999874 56678889999999999998 88999999999999999987642212467789999999999997
Q ss_pred ----------CCEEEEecCC-eEEEEEcCCCce----EEEEEecccCCCCCceeEEEEEEccCC---E-EEEEcCCCcEE
Q psy12614 167 ----------GDYLVTGCAA-AVRVWDIHKGHA----IHKMSLDKSSKFSKNTAVWCVAFCADF---T-IITGDSGGFVR 227 (708)
Q Consensus 167 ----------~~~l~~~~~d-~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~---~-l~~~~~dg~i~ 227 (708)
+++|++++.| .|++||+.+++. ...+. +|...|.+++|+|++ . +++++.|+.|+
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-------~H~~~V~~v~~sp~~~~~~~las~s~D~~v~ 232 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-------GHSDWVRDVAWSPTVLLRSYMASVSQDRTCI 232 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-------CCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-------CCCCceEEEEECCCCCCceEEEEEECCCcEE
Confidence 5799999999 999999988763 33332 448899999999984 4 89999999999
Q ss_pred EEeCCCCe---eEEEe--eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 228 FWDGKTGV---QWSDV--KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 228 ~wd~~~~~---~~~~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+||++++. ....+ ..|...|.+++|+|++++|++++.|+.|++|+...
T Consensus 233 iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 99987643 12233 46788999999999999999999999999999874
No 62
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=4.6e-35 Score=336.07 Aligned_cols=504 Identities=10% Similarity=0.068 Sum_probs=365.3
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC------CcEEEE
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ------GFVNEY 96 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d------~~i~vw 96 (708)
+.+.+.+.+||| ++||.++. +.|.+|++.+++. ..+.+|. ..+.+++|| |++|++++.+ ..|.+|
T Consensus 13 ~~~~~~~~~~S~--~~iaf~~~-~~l~~~~~~gg~~--~~lt~~~--~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~ 85 (1045)
T 1k32_A 13 MPNLLLNPDIHG--DRIIFVCC-DDLWEHDLKSGST--RKIVSNL--GVINNARFFPDGRKIAIRVMRGSSLNTADLYFY 85 (1045)
T ss_dssp CCCCCEEEEEET--TEEEEEET-TEEEEEETTTCCE--EEEECSS--SEEEEEEECTTSSEEEEEEEESTTCCEEEEEEE
T ss_pred ccceEeCcEEeC--CEEEEEEC-CcEEEEECCCCcE--EEeeeCC--CcccCeEECCCCCEEEEEEeeccCCCCCeEEEE
Confidence 567899999996 58888875 6999999988775 3678898 999999999 8999987543 479999
Q ss_pred ECCCCeEeEEEeecCCce-------EEEEEecCCCEEEEEeCC------CcEEEEEccCCcEEEEEecccccccEEEEEE
Q psy12614 97 DMRRLNIKSSTAVTSGTC-------WCLSVHKKKRLLAAGTEQ------GHINLFQISDEGLLYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v-------~~~~~s~~~~~la~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 163 (708)
|+.+++ ...+..|...+ .+++|+|||+++++++.+ ..|++|++.+++.. .+..+. ...++|
T Consensus 86 d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~---~l~~~~--~~~~~~ 159 (1045)
T 1k32_A 86 NGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFV---PLNLGP--ATHILF 159 (1045)
T ss_dssp ETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEE---ECCSCS--CSEEEE
T ss_pred ECCCCC-eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeE---EecCCC--cceeee
Confidence 999887 56778888888 999999999977776644 45888888888763 333332 346779
Q ss_pred CCCCCEEEEecC------------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEe
Q psy12614 164 HSSGDYLVTGCA------------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWD 230 (708)
Q Consensus 164 s~d~~~l~~~~~------------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd 230 (708)
+| | ++++++. + ...+|....+.....+. .+...+.++.|+++..+++++.++.+.+|.
T Consensus 160 sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~-------~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~ 230 (1045)
T 1k32_A 160 AD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIV-------DMSTHVSSPVIVGHRIYFITDIDGFGQIYS 230 (1045)
T ss_dssp ET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEE-------CCSSCCEEEEEETTEEEEEECTTSSCEEEE
T ss_pred CC-C-EEEEeccCCCccccccccCCCcCCEEEECCCCCeEECc-------CCCCcccceEEeCCEEEEEEeccCceEEEE
Confidence 99 8 8887642 2 45666544434444452 347889999999994466778889888887
Q ss_pred CCC-CeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe----------
Q psy12614 231 GKT-GVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV---------- 299 (708)
Q Consensus 231 ~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------- 299 (708)
+.. +.....+..|. .+...+|+|||++|+++ .++.|++|++.. .. ...+.
T Consensus 231 ~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~--------~~---------l~~l~~~~~~~~~~~ 291 (1045)
T 1k32_A 231 TDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDT--------EK---------IEKIEIGDLESPEDR 291 (1045)
T ss_dssp EETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTT--------CC---------EEECCCCCCCBCCSE
T ss_pred EeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCc--------eE---------eeeeccCcccccccc
Confidence 643 44445555554 46678999999999887 489999999854 21 11222
Q ss_pred -ccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCC-CCceEEEEcCCcEEEEE-cCCeEE-EEEecCC
Q psy12614 300 -IHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLA-QSTPVSLAKDIQHVLLQ-YTSHLE-LWSLGSA 372 (708)
Q Consensus 300 -~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~-~~~~~~~s~~~~~l~~~-~~~~i~-i~~~~~~ 372 (708)
.|...+.+++|+ +..|++++ ++.+.+|++.+.....+..+.. ....++|+ ||+.++.. .+..+. +|+...+
T Consensus 292 ~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~ 369 (1045)
T 1k32_A 292 IISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG 369 (1045)
T ss_dssp EEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC
T ss_pred cccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC
Confidence 245578888887 56777776 8899999998887666653444 45678899 99888875 455677 7787664
Q ss_pred CCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEEEEecCCcceeEEeecCCcccc
Q psy12614 373 QSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHSLDLDGDKPQISRIKNLPAPLF 451 (708)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 451 (708)
. ...+. .+...+..++|+|||++|+++ .++.|++||+.+ +.. ..+ +.+|..
T Consensus 370 ~---------------------~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t--g~~--~~~--~~~~~~ 421 (1045)
T 1k32_A 370 K---------------------AEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET--GKP--TVI--ERSREA 421 (1045)
T ss_dssp C---------------------EEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT--CCE--EEE--EECSSS
T ss_pred C---------------------ceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCC--Cce--EEe--ccCCCC
Confidence 3 22333 566789999999999999985 489999999976 321 111 223433
Q ss_pred cceeEEEEEecCCCeEEEEecCC----------c--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEec
Q psy12614 452 KSIFTHVLISADSTLLLAVSLNG----------P--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADR 519 (708)
Q Consensus 452 ~~~i~~~~~s~d~~~l~~~~~dg----------~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 519 (708)
.+.+++|||||++|++++.++ . +|++..+ + +..+. .+ ...+..++|+|||++|++++.
T Consensus 422 --~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g--~-~~~l~---~~--~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 422 --MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR--K-IFAAT---TE--NSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp --CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT--E-EEECS---CS--SSBEEEEEECTTSCEEEEEES
T ss_pred --CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC--c-EEEee---CC--CcccCCceEcCCCCEEEEEec
Confidence 445599999999999887754 3 6666655 3 33333 33 557888999999999999988
Q ss_pred CCeEEEEECCc---------------------------------------------eeeecCCCCCCceEEEEcCCCCEE
Q psy12614 520 KSHVVIWKNGQ---------------------------------------------HHASLPRYRKPSTAMAIHPTLSTL 554 (708)
Q Consensus 520 d~~i~iw~~~~---------------------------------------------~~~~~~~~~~~v~~l~~s~d~~~l 554 (708)
++...+|+... ....++.|...+..++|+||++++
T Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~ 571 (1045)
T 1k32_A 492 RSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILI 571 (1045)
T ss_dssp CCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEE
T ss_pred ccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEE
Confidence 77666665320 112445567788999999999878
Q ss_pred EE-------------EecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEec
Q psy12614 555 VT-------------VYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINK 621 (708)
Q Consensus 555 ~~-------------~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~ 621 (708)
++ ...+..|++||+.+++.. .+. ..+.+++|||||++|++++.+ .|++||+
T Consensus 572 ~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~------------~l~---~~v~~~~~S~DG~~l~~~~~~-~i~~~d~ 635 (1045)
T 1k32_A 572 YSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT------------EVK---NNLTDLRLSADRKTVMVRKDD-GKIYTFP 635 (1045)
T ss_dssp EECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE------------EEE---EEEEEEEECTTSCEEEEEETT-SCEEEEE
T ss_pred EEecccCcccccccccCCCceEEEEECCCCcEE------------Eee---cCcceEEECCCCCEEEEEcCC-cEEEEeC
Confidence 75 123457888999887643 111 568899999999999999877 7999999
Q ss_pred CCCC
Q psy12614 622 NKSL 625 (708)
Q Consensus 622 ~~~~ 625 (708)
....
T Consensus 636 ~~~~ 639 (1045)
T 1k32_A 636 LEKP 639 (1045)
T ss_dssp SSCT
T ss_pred ccCc
Confidence 7654
No 63
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-37 Score=318.80 Aligned_cols=344 Identities=14% Similarity=0.165 Sum_probs=260.3
Q ss_pred eeeeeeec-cCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCCC---CCeEE-EEEecCCCCCcEEEEEEe--CCEEEE
Q psy12614 15 GVHNIKFY-APEPKVINCIACEP-KSSRLAVSRADQSIEIWDISE---TPHVD-RVFIGDPLSNSIECLTWF--NDRLFS 86 (708)
Q Consensus 15 ~~~~~~~~-~~h~~~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~---~~~~~-~~~~~h~~~~~v~~l~~~--~~~l~s 86 (708)
....+..+ .+|.+.|++++|+| ++++||+|+.||.|+|||+.+ +.... ....+|. ..|.+++|+ +++|++
T Consensus 51 ~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s 128 (437)
T 3gre_A 51 RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCS--STVTQITMIPNFDAFAV 128 (437)
T ss_dssp CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECS--SCEEEEEECTTSSEEEE
T ss_pred cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCC--CCEEEEEEeCCCCEEEE
Confidence 33444555 89999999999999 999999999999999999976 43211 1222588 999999999 889999
Q ss_pred EcCCCcEEEEECC---CCeEeEEEee------------cCCceEEEE--EecCCCEEEEEeCCCcEEEEEccCCcEEEEE
Q psy12614 87 GGLQGFVNEYDMR---RLNIKSSTAV------------TSGTCWCLS--VHKKKRLLAAGTEQGHINLFQISDEGLLYEK 149 (708)
Q Consensus 87 ~~~d~~i~vwd~~---~~~~~~~~~~------------~~~~v~~~~--~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~ 149 (708)
++.||+|++||++ +++....+.. +...+.++. +++++.+|++++.|+.|++||+.+++.. .
T Consensus 129 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~ 206 (437)
T 3gre_A 129 SSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL--Q 206 (437)
T ss_dssp EETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE--E
T ss_pred EeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee--E
Confidence 9999999999995 5555444433 445566666 5578999999999999999999999887 5
Q ss_pred eccc--ccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc----CCE-EEEEc
Q psy12614 150 LLDR--QQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA----DFT-IITGD 221 (708)
Q Consensus 150 ~~~~--~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~-l~~~~ 221 (708)
.+.. |.+.|.+++|+|++++|++++.| .|++||+++++.+..+...+ ...|.+++|+| ++. +++++
T Consensus 207 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~v~~~~~~~~~s~~~~~l~s~~ 280 (437)
T 3gre_A 207 IIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGD------HAPITHVEVCQFYGKNSVIVVGGS 280 (437)
T ss_dssp EEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTT------CEEEEEEEECTTTCTTEEEEEEES
T ss_pred EEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCC------CCceEEEEeccccCCCccEEEEEc
Confidence 5655 88999999999999999999999 99999999999988876532 67899996664 564 88999
Q ss_pred CCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe--
Q psy12614 222 SGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-- 299 (708)
Q Consensus 222 ~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-- 299 (708)
.||.|++||+++++.+..+.+|...+..+.|+|+++.+ .. . .+.
T Consensus 281 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------------~~--------~------------~~~~~ 326 (437)
T 3gre_A 281 SKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL--------------EE--------L------------NFCGI 326 (437)
T ss_dssp TTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG--------------GG--------C------------CCCCC
T ss_pred CCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccc--------------cc--------c------------eeccc
Confidence 99999999999999999999999999989999987655 11 0 022
Q ss_pred ccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCcee-ecCccCCC---CceEEEEcCCcEEEEEcCCeEEEEEecCCCC
Q psy12614 300 IHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLV-KYPCTLAQ---STPVSLAKDIQHVLLQYTSHLELWSLGSAQS 374 (708)
Q Consensus 300 ~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~-~~~~~~~~---~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~ 374 (708)
.|...|.+++|+ +.+|++++.|+.|++||+.+.... .+..+... .....++++..+++.. |+....
T Consensus 327 ~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-- 397 (437)
T 3gre_A 327 RSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK-------MKRTST-- 397 (437)
T ss_dssp CSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE-------CC------
T ss_pred ccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe-------cccccc--
Confidence 388899999999 779999999999999999887632 22211111 1223334443333322 111111
Q ss_pred CCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCC--CcEEEEEc-CCceEEEE
Q psy12614 375 TDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSND--GKYVAYST-ESCVRLHS 430 (708)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--g~~l~~~~-d~~i~i~~ 430 (708)
........|...|.+++++++ +.+|++++ ||.|+||+
T Consensus 398 -------------------~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 398 -------------------HSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ----------------------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred -------------------cccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 122333468899999999988 77888865 99999994
No 64
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.8e-35 Score=297.38 Aligned_cols=280 Identities=12% Similarity=0.094 Sum_probs=227.5
Q ss_pred CcEEEEEEcCCCCEEEEEeCCC-------cEEEEeCCCCCe---------EEEEEecCCCCCcEEEEEEeCCEEEEEc--
Q psy12614 27 KVINCIACEPKSSRLAVSRADQ-------SIEIWDISETPH---------VDRVFIGDPLSNSIECLTWFNDRLFSGG-- 88 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg-------~v~iwd~~~~~~---------~~~~~~~h~~~~~v~~l~~~~~~l~s~~-- 88 (708)
-+|.|++|+||+++||+|+.+. .|+||++..+.. ....+.+|. ..|.+++++++.++++.
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~--~~v~s~~~~~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDND--DSPTAIDASKGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTS--CCCCEEEEETTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCC--CceEEEEeCCCEEEEEECC
Confidence 4699999999999999997543 499999976432 123567888 89999999988877764
Q ss_pred ---------CCCcEEEEECCCCeEe-E---EE-----eecCCceEEEEEecCCCEEEEEe--CCCcEEEEEccCCcEEEE
Q psy12614 89 ---------LQGFVNEYDMRRLNIK-S---ST-----AVTSGTCWCLSVHKKKRLLAAGT--EQGHINLFQISDEGLLYE 148 (708)
Q Consensus 89 ---------~d~~i~vwd~~~~~~~-~---~~-----~~~~~~v~~~~~s~~~~~la~~~--~d~~i~iwd~~~~~~~~~ 148 (708)
.|+.+++|++.+.... . .. ..+...+.+++|||||++||+++ .|++|++||+.+++.+
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~-- 170 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK-- 170 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE--
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE--
Confidence 4778999998764321 1 11 12345689999999999987654 6899999999999886
Q ss_pred EecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCC---
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGG--- 224 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg--- 224 (708)
..+ .|.+.|.+++|+|||++|++++.+.+.+|+..+++.+...... .+...+.+++|+|+++ +++++.++
T Consensus 171 ~~~-~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~v~fspdg~~l~~~s~d~~~~ 244 (365)
T 4h5i_A 171 FEI-ETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDF-----DKNWSLSKINFIADDTVLIAASLKKGKG 244 (365)
T ss_dssp EEE-ECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCC-----CTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred EEe-CCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecC-----CCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence 344 3778899999999999999999778888888888877655433 4588999999999996 77777776
Q ss_pred -cEEEEeCCCCee----EEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE-E
Q psy12614 225 -FVRFWDGKTGVQ----WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN-R 298 (708)
Q Consensus 225 -~i~~wd~~~~~~----~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~-~ 298 (708)
.++.|++..+.. ...+.+|...|++++|+|||++||+|+.|+.|++||+.+ ++ .... +
T Consensus 245 ~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~--------~~--------~~~~~~ 308 (365)
T 4h5i_A 245 IVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD--------LS--------MSKIFK 308 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT--------TE--------EEEEET
T ss_pred eEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC--------Cc--------EEEEec
Confidence 588899876643 345678999999999999999999999999999999998 65 4555 4
Q ss_pred eccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCC
Q psy12614 299 VIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 299 ~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~ 332 (708)
.+|...|++++|+ +.+|++++.|++|+||++...
T Consensus 309 ~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 309 QAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 7899999999999 899999999999999999654
No 65
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=306.80 Aligned_cols=300 Identities=12% Similarity=0.144 Sum_probs=243.9
Q ss_pred eccCCCCcEEEEEEcCCCCEE-EEEeC---CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-C----CEEEEEcCCC
Q psy12614 21 FYAPEPKVINCIACEPKSSRL-AVSRA---DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-N----DRLFSGGLQG 91 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~l-a~~~~---dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~----~~l~s~~~d~ 91 (708)
++.+|.+.|++++|+|+++.+ ++|+. ||.|+|||+.+++.......+|. ..|.+++|+ . ++|++++.||
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKA--KPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEES--SCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeeccc--CcEEEEEEcCCCCCCceEEEecCCC
Confidence 557899999999999999655 56655 89999999999887664556888 999999999 3 8999999999
Q ss_pred cEEEEECCCCe-EeEEEeecCCceEEEE------EecCCCEEEEEeCCCcEEEEEccCCc-EEEEEecccccc----cEE
Q psy12614 92 FVNEYDMRRLN-IKSSTAVTSGTCWCLS------VHKKKRLLAAGTEQGHINLFQISDEG-LLYEKLLDRQQG----RIL 159 (708)
Q Consensus 92 ~i~vwd~~~~~-~~~~~~~~~~~v~~~~------~s~~~~~la~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~----~v~ 159 (708)
.|++||+.+++ ++..+.+|...|.+++ |+|++++|++++.|+.|++||+.+++ .. ..+..|.+ .+.
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~--~~~~~~~~~~~~~v~ 168 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPV--ANMEPVQGENKRDCW 168 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCS--EEECCCTTSCCCCEE
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcc--eeccccCCCCCCceE
Confidence 99999999988 8899999999999995 46899999999999999999999876 33 44444433 788
Q ss_pred EEE----ECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc---CCE-EEEEcCCCcEEEEe
Q psy12614 160 CTA----WHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA---DFT-IITGDSGGFVRFWD 230 (708)
Q Consensus 160 ~~~----~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~-l~~~~~dg~i~~wd 230 (708)
+++ |+|++++|++++.+ .|++||+++++..... .+...+.+++|+| ++. +++++.||.|++||
T Consensus 169 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d 240 (357)
T 3i2n_A 169 TVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET--------NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFD 240 (357)
T ss_dssp EEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE--------ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEE
T ss_pred EEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec--------CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEe
Confidence 998 78999999999999 9999999998875543 2378899999999 774 89999999999999
Q ss_pred CCCCeeEEEee-----ccccCeEEEEEeCCCC-EEEEEecCCeEEEEEccCCcccccCC--CCC-CCCcceEEeEEEecc
Q psy12614 231 GKTGVQWSDVK-----THKKDILALTVSEDEN-YLYCAGVDPTVVCFQRTRKPQVCSTS--GPE-QGSSVWVRSVNRVIH 301 (708)
Q Consensus 231 ~~~~~~~~~~~-----~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~--g~~-~~~~~~~~~~~~~~~ 301 (708)
+++++....+. +|...|.+++|+|+++ +|++++.||.|++||+.......... +.. .....+.....+.+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 320 (357)
T 3i2n_A 241 MRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLS 320 (357)
T ss_dssp EEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECC
T ss_pred CcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccC
Confidence 98876554443 8999999999999998 89999999999999998721111000 000 001123467788899
Q ss_pred ccceEEEEEe--CCEEE-EEcCCCeEEEEeCCCC
Q psy12614 302 EGDVKSLALH--GNRLY-SGGLDSYLSLSYYPPK 332 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~-s~~~d~~i~iw~~~~~ 332 (708)
...|.+++|+ +.+|+ +++.|+.|++|++.+.
T Consensus 321 ~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 321 TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 9999999999 77787 8999999999998754
No 66
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.6e-36 Score=305.98 Aligned_cols=292 Identities=10% Similarity=0.150 Sum_probs=244.6
Q ss_pred eeccCCCCcEEEEEEcCC----CCEEEEEeCCCcEEEEeCCCCCeEEEEEec-----CCCCCcEEEEEEe-C-----CEE
Q psy12614 20 KFYAPEPKVINCIACEPK----SSRLAVSRADQSIEIWDISETPHVDRVFIG-----DPLSNSIECLTWF-N-----DRL 84 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~----~~~la~~~~dg~v~iwd~~~~~~~~~~~~~-----h~~~~~v~~l~~~-~-----~~l 84 (708)
.+..+|.+.|++++|+|+ ...+++++.++.|+|||+.+++.+. .+.. |. ..|.+++|+ . .+|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~-~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~l 88 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIR-LLQSYVDADAD--ENFYTCAWTYDSNTSHPLL 88 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEE-EEEEEECSCTT--CCEEEEEEEECTTTCCEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEE-eeeeccccCCC--CcEEEEEeccCCCCCCCEE
Confidence 466799999999999984 4556666667799999999877654 4443 44 789999999 2 489
Q ss_pred EEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEec---ccccccEEE
Q psy12614 85 FSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLL---DRQQGRILC 160 (708)
Q Consensus 85 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~v~~ 160 (708)
++++.||.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+.+++.. ..+ ..|...|.+
T Consensus 89 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 89 AVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV--AIFGGVEGHRDEVLS 166 (366)
T ss_dssp EEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE--EEECSTTSCSSCEEE
T ss_pred EEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE--EEecccccccCceeE
Confidence 9999999999999999999999999999999999999 9999999999999999999998876 444 689999999
Q ss_pred EEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecc----------------------cCCCCCceeEEEEEEccCCEE
Q psy12614 161 TAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDK----------------------SSKFSKNTAVWCVAFCADFTI 217 (708)
Q Consensus 161 ~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~----------------------~~~~~~~~~v~~~~~~~~~~l 217 (708)
++|+|++++|++++.| .|++||+.+++....+.... ... .+...|.+++|+ ...+
T Consensus 167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~-~~~l 244 (366)
T 3k26_A 167 ADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRD-IHRNYVDCVRWL-GDLI 244 (366)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECS-SCSSCCCEEEEE-TTEE
T ss_pred EEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccccc-CCcceEEEEEEc-CCEE
Confidence 9999999999999999 99999998776443222100 000 247889999999 4479
Q ss_pred EEEcCCCcEEEEeCCCCee--------------EEEeeccccCeEEEEEeCC--CCEEEEEecCCeEEEEEccCCccccc
Q psy12614 218 ITGDSGGFVRFWDGKTGVQ--------------WSDVKTHKKDILALTVSED--ENYLYCAGVDPTVVCFQRTRKPQVCS 281 (708)
Q Consensus 218 ~~~~~dg~i~~wd~~~~~~--------------~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~iw~~~~~~~~~~ 281 (708)
++++.||.|++||+.++.. +..+..|...|.+++|+|+ +++|++++.||.|++||+.+
T Consensus 245 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~------ 318 (366)
T 3k26_A 245 LSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV------ 318 (366)
T ss_dssp EEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS------
T ss_pred EEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC------
Confidence 9999999999999987643 7788889999999999999 99999999999999999988
Q ss_pred CCCCCCCCcceEEeEEEecc--ccceEEEEEe--CCEEEEEcCCCeEEEEeCC
Q psy12614 282 TSGPEQGSSVWVRSVNRVIH--EGDVKSLALH--GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 282 ~~g~~~~~~~~~~~~~~~~~--~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~ 330 (708)
++ ........+..| ...|.+++|+ +++|++++.||.|++||+.
T Consensus 319 --~~----~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 319 --ED----PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp --SS----GGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred --CC----CccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 43 111134466677 7899999999 8899999999999999985
No 67
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-37 Score=317.20 Aligned_cols=295 Identities=16% Similarity=0.167 Sum_probs=227.6
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--CeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISET--PHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~--~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
.+..|.+.|++++|+|++++||+|+.||.|+|||+.++ +.+. .+.+|. ..|.+++|+ +++|++++.|++|++|
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~h~--~~v~~~~~s~~~~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR-TFSDHD--KIVTCVDWAPKSNRIVTCSQDRNAYVY 82 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECC-CBCCCS--SCEEEEEECTTTCCEEEEETTSSEEEC
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEE-EEecCC--ceEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 34456789999999999999999999999999999987 4444 888999 999999999 8999999999999999
Q ss_pred ECCCCe---EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE---EEEEeccc-ccccEEEEEECCCCCE
Q psy12614 97 DMRRLN---IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL---LYEKLLDR-QQGRILCTAWHSSGDY 169 (708)
Q Consensus 97 d~~~~~---~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~---~~~~~~~~-~~~~v~~~~~s~d~~~ 169 (708)
|+.+++ +...+..|...|.+++|+|++++|++++.|+.|++||+.+++. . ..+.. |...|.+++|+|++++
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVS--KHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCC--EEECSSCCSCEEEEEECTTSSE
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceee--eEeecccCCCeEEEEEcCCCCE
Confidence 999987 6777889999999999999999999999999999999998762 2 45666 9999999999999999
Q ss_pred EEEecCC-eEEEEEcCCCc------------------eEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEE
Q psy12614 170 LVTGCAA-AVRVWDIHKGH------------------AIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFW 229 (708)
Q Consensus 170 l~~~~~d-~i~iwd~~~~~------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~w 229 (708)
|++++.| .|++||+..+. .+..+ .|...|.+++|+|+++ +++++.||.|++|
T Consensus 161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~v~~~~~sp~~~~l~~~~~d~~i~iw 232 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--------PSGGWVHAVGFSPSGNALAYAGHDSSVTIA 232 (377)
T ss_dssp EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--------CCSSSEEEEEECTTSSCEEEEETTTEEC-C
T ss_pred EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--------cCCceEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 9999999 99999986332 22222 2378899999999996 9999999999999
Q ss_pred eCCCCee----EEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccC-CC--CCCCC-------------
Q psy12614 230 DGKTGVQ----WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCST-SG--PEQGS------------- 289 (708)
Q Consensus 230 d~~~~~~----~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~g--~~~~~------------- 289 (708)
|+.+++. +..+.+|...|.+++|+|++++|++++.++.+ +|+.......... .. .....
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (377)
T 3dwl_C 233 YPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREE 311 (377)
T ss_dssp EECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC
T ss_pred ECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccc
Confidence 9999887 77888999999999999999999988766655 6666531100000 00 00000
Q ss_pred ----------cceE----------EeEEEeccccceEEEEEe---CC---EEEEEcCCCeEEEEeC
Q psy12614 290 ----------SVWV----------RSVNRVIHEGDVKSLALH---GN---RLYSGGLDSYLSLSYY 329 (708)
Q Consensus 290 ----------~~~~----------~~~~~~~~~~~v~~l~~~---~~---~l~s~~~d~~i~iw~~ 329 (708)
..+. .......|...|.++++. +. .+++++.||.|++||+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 312 EGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0000 001112399999999976 33 6999999999999985
No 68
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-38 Score=316.58 Aligned_cols=314 Identities=12% Similarity=0.095 Sum_probs=250.6
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCe
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
.-..+|.+++|||||+++|+++.|++|+ |...++ .+.+|. ..|.+++|+ .. .++.+.+|+.+.
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~----~l~gh~--~~v~~V~FsPdg------~~~~~~~~~~~~-- 76 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK----DINCNS--KNLFHVKEFPLE------FENKLDFELAQQ-- 76 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS----CCSSBG--GGTEEEEEECCC------CCCTTTTSCCCS--
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccc----eecCCC--ccEEEEEECCCC------CcceEEEEeCCC--
Confidence 3458899999999999999999999999 766554 347999 999999999 22 455555555432
Q ss_pred EeEEEe-ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccc-----cEEEEEECCCCCEEEEecCC
Q psy12614 103 IKSSTA-VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG-----RILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 103 ~~~~~~-~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-----~v~~~~~s~d~~~l~~~~~d 176 (708)
...+. .|...|.+++|||||++||+++.||.|++||.++ +. ..+. |.. .|.+++|||||++||+|+.|
T Consensus 77 -~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l--~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D 150 (588)
T 2j04_A 77 -NGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--ML--TNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED 150 (588)
T ss_dssp -SCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EE--EECC-CSSCSTTTCEEEEEECSSSSCEEEEETT
T ss_pred -ceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--ee--eecc-CCCccccccEEEEEEcCCCCEEEEEcCC
Confidence 22233 4578999999999999999999999999999554 33 4555 554 59999999999999999999
Q ss_pred -eEEEEEcCCCce-------EEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCee---EEEe-eccc
Q psy12614 177 -AVRVWDIHKGHA-------IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQ---WSDV-KTHK 244 (708)
Q Consensus 177 -~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~---~~~~-~~~~ 244 (708)
+|++||+.++.. +..+..... +|...|.+++|+||| +++++.|+.|++||+.++.. ..++ .+|.
T Consensus 151 GtVkIWd~~~~~l~~~~~i~l~ti~~~~~---gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~ 226 (588)
T 2j04_A 151 GELQFFSIRKNSENTPEFYFESSIRLSDA---GSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASR 226 (588)
T ss_dssp SEEEEEECCCCTTTCCCCEEEEEEECSCT---TCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCS
T ss_pred CEEEEEECCCCccccccceeeeeeecccc---cccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeeccccc
Confidence 999999998863 455543333 337899999999999 99999999999999988773 3556 4788
Q ss_pred cCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEE--e--CCEEEEEcC
Q psy12614 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL--H--GNRLYSGGL 320 (708)
Q Consensus 245 ~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~--~--~~~l~s~~~ 320 (708)
..|.+++|+ ++.|++++ ++.|++||+.+ ++ ......+|...|..+++ + +..+++++.
T Consensus 227 ~~V~svaFs--g~~LASa~-~~tIkLWd~~~--------~~--------~~~~~~gh~~~V~~va~~~s~d~~~La~a~e 287 (588)
T 2j04_A 227 RKITDLKIV--DYKVVLTC-PGYVHKIDLKN--------YS--------ISSLKTGSLENFHIIPLNHEKESTILLMSNK 287 (588)
T ss_dssp SCCCCEEEE--TTEEEEEC-SSEEEEEETTT--------TE--------EEEEECSCCSCCCEEEETTCSSCEEEEECSS
T ss_pred CcEEEEEEE--CCEEEEEe-CCeEEEEECCC--------Ce--------EEEEEcCCCceEEEEEeeeCCCCCEEEEEcC
Confidence 999999999 58999887 69999999998 53 22333389999999999 7 668999999
Q ss_pred CCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEe
Q psy12614 321 DSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSA 400 (708)
Q Consensus 321 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (708)
||. ++|..+ .++++|++.+++.. ++.+++|+...+.. .. .
T Consensus 288 dG~-klw~~d---------------~~~~spd~~l~a~~-d~~v~lW~~~g~~l----------------------~~-~ 327 (588)
T 2j04_A 288 TSY-KVLLED---------------ELHVTADNIIAPYL-EKKFKKWSTIWNEF----------------------NN-Y 327 (588)
T ss_dssp CEE-EEEESS---------------SEEEECCCSSHHHH-HHHHHHTTTTTTSS----------------------SS-S
T ss_pred CCC-EEEeec---------------cEEECCCceEEEEc-CCEEEEEECCCCce----------------------ee-e
Confidence 999 999985 37799999888875 88899998754330 01 1
Q ss_pred cCCCceEEEEeCCCCcEEEEEc
Q psy12614 401 VNNATIRCSVVSNDGKYVAYST 422 (708)
Q Consensus 401 ~~~~~i~~~~~s~~g~~l~~~~ 422 (708)
.+...|.+++|||||+.+|++.
T Consensus 328 ~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 328 ETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp CCEEEEEEEEECTTSSEEEEEE
T ss_pred ccceEEEEEEECCCCCEEEEEE
Confidence 2245689999999999999753
No 69
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.1e-36 Score=308.84 Aligned_cols=322 Identities=11% Similarity=0.144 Sum_probs=259.2
Q ss_pred EEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec
Q psy12614 74 IECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL 151 (708)
Q Consensus 74 v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~ 151 (708)
+++++|+ +++|++++.|+.|++||+.+++....+..| ..+...+|+|++++||+++.|+.|++||+.+++.. ..+
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~ 135 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQR--EID 135 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEE--EET
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCccee--eec
Confidence 4578999 999999999999999999998877666666 55666688999999999999999999999988876 677
Q ss_pred ccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEE
Q psy12614 152 DRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFW 229 (708)
Q Consensus 152 ~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~w 229 (708)
.+|.+.|.+++|+|++++|++++.| .|++||+.+++.+..+. .|...|.+++|+|++. +++++.||.|++|
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~~~d~~v~iw 208 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI-------GHRATVTDIAIIDRGRNVLSASLDGTIRLW 208 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE-------CCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc-------CCCCcEEEEEEcCCCCEEEEEcCCCcEEEe
Confidence 8999999999999999999999999 99999999999888876 3488999999999995 9999999999999
Q ss_pred eCCCCeeEEEeec---cccCeEE---------------------EEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCC
Q psy12614 230 DGKTGVQWSDVKT---HKKDILA---------------------LTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGP 285 (708)
Q Consensus 230 d~~~~~~~~~~~~---~~~~i~~---------------------~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~ 285 (708)
|+++++.+..+.. +...+.+ ++|+|++++|++++.||.|++||+.+ ++
T Consensus 209 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~--------~~ 280 (420)
T 3vl1_A 209 ECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFS--------KE 280 (420)
T ss_dssp ETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTT--------CC
T ss_pred ECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCC--------Cc
Confidence 9999999888864 3344444 45578999999999999999999988 54
Q ss_pred CCCCcceEEeEE-EeccccceEEEEEe--CC-EEEEEcCCCeEEEEeCCCCc--eeecCccCCCCceEEEEcCCcEEEEE
Q psy12614 286 EQGSSVWVRSVN-RVIHEGDVKSLALH--GN-RLYSGGLDSYLSLSYYPPKT--LVKYPCTLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 286 ~~~~~~~~~~~~-~~~~~~~v~~l~~~--~~-~l~s~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~~~~s~~~~~l~~~ 359 (708)
.... ...|...|.+++|+ +. +|++++.||.|++||+.+.. +..+..+........+.+++++++++
T Consensus 281 --------~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~ 352 (420)
T 3vl1_A 281 --------QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSS 352 (420)
T ss_dssp --------EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEE
T ss_pred --------eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEe
Confidence 3333 34588899999999 55 99999999999999998764 34444323333334466688888876
Q ss_pred -cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc----EEEEEcCCceEEEEEEe
Q psy12614 360 -YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK----YVAYSTESCVRLHSLDL 433 (708)
Q Consensus 360 -~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~----~l~~~~d~~i~i~~~~~ 433 (708)
.|+.+++|++..... ...+ ... ........+...|.+++|+|+++ ++++|.+|.+.+|+++.
T Consensus 353 ~~d~~v~iw~~~~~~~-------~~~~-~~~----~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 353 GFDTSIKLDIISDPES-------ERPA-IEF----ETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp TTTEEEEEEEECCTTC-------CSCE-ECT----TSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred cCCccEEEEeccCCCC-------Cccc-eec----cCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 789999999987431 0000 000 00112346788999999999999 66678899999999763
No 70
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3e-36 Score=312.01 Aligned_cols=288 Identities=16% Similarity=0.214 Sum_probs=229.9
Q ss_pred eccCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCeEE-EEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEE
Q psy12614 21 FYAPEPKVINCIACEP-KSSRLAVSRADQSIEIWDISETPHVD-RVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNE 95 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~~~~~~-~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~v 95 (708)
...+|...|+|++|+| ++++||+|+.||.|+|||+.++.... ..+.+|. +.|++|+|+ +++|++++.||+|++
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~--~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAG--GSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSS--CCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCC--CCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 3457889999999999 56799999999999999998866433 2456898 999999998 789999999999999
Q ss_pred EECCCCeEeEEEee--cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCC-EEEE
Q psy12614 96 YDMRRLNIKSSTAV--TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD-YLVT 172 (708)
Q Consensus 96 wd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-~l~~ 172 (708)
||++++........ +...+.+++|+|++++|++|+.||.|++||+++... ..+.+|...|.+++|+|++. +|++
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~---~~~~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL---WNLRMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC---CCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCccee---EEEecccceEEeeeecCCCceEEEE
Confidence 99988665444433 334678999999999999999999999999986654 67889999999999999986 7788
Q ss_pred ecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeecccc-----
Q psy12614 173 GCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKK----- 245 (708)
Q Consensus 173 ~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~----- 245 (708)
++.| .|++||+++++....+.... .|...|++++|+|+|. |++++.||.|++||+.++.....+..|..
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~----~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 344 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSL----PHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQH 344 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCC----BCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSS
T ss_pred ecCcceeeEEecccccccceEEEee----eccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccccc
Confidence 9999 99999998876554443221 4588999999999995 99999999999999999888777655542
Q ss_pred -CeEEEEEeCCCCEEEEEe------------cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE-eccccceEEE-EE
Q psy12614 246 -DILALTVSEDENYLYCAG------------VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR-VIHEGDVKSL-AL 310 (708)
Q Consensus 246 -~i~~~~~s~~~~~l~~~~------------~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~v~~l-~~ 310 (708)
.+....|+|++..++++. .++.|++||..+ |+ ....+ .+|...|.++ +|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~--------g~--------~~~~l~~~~~~~v~s~~~f 408 (435)
T 4e54_B 345 LTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNS--------GK--------MMCQLYDPESSGISSLNEF 408 (435)
T ss_dssp SCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSS--------CC--------EEEEECCSSCCCCCCEEEE
T ss_pred ceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCC--------Cc--------EEEEEeCCCCCcEEEEEEE
Confidence 234456777777777664 235799999998 75 34443 4688888887 57
Q ss_pred e--CCEEEEEcCCCeEEEEeCCCCce
Q psy12614 311 H--GNRLYSGGLDSYLSLSYYPPKTL 334 (708)
Q Consensus 311 ~--~~~l~s~~~d~~i~iw~~~~~~~ 334 (708)
+ +.+|++|+ |+.|++|+++++..
T Consensus 409 spdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 409 NPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CTTSSCEEEEC-SSEEEECCCC----
T ss_pred CCCCCEEEEEc-CCcEEEEECCcCee
Confidence 7 77888765 88999999987653
No 71
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-34 Score=318.81 Aligned_cols=305 Identities=11% Similarity=0.134 Sum_probs=239.7
Q ss_pred EEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCC-----CeEeEEEeecCCceEEEEEecCCCEEEEEeCC
Q psy12614 61 VDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRR-----LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ 132 (708)
Q Consensus 61 ~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d 132 (708)
+...+.+|. +.|++++|+ +++|++|+.|++|++||+.+ +.....+.+|...|.+++|+|++++|++|+.|
T Consensus 374 ~~~~l~~H~--~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 374 LKGTMRAHT--DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp EEEEEECCS--SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred hhhhcccCC--ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 345789999 999999998 57899999999999999976 34567889999999999999999999999999
Q ss_pred CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEE
Q psy12614 133 GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAF 211 (708)
Q Consensus 133 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 211 (708)
+.|++||+.++... ..+.+|...|.+++|+|++++|++++.| +|++||..... ...+..... +|...|.+++|
T Consensus 452 g~v~vwd~~~~~~~--~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~-~~~~~~~~~---~h~~~v~~~~~ 525 (694)
T 3dm0_A 452 GELRLWDLAAGVST--RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC-KYTISEGGE---GHRDWVSCVRF 525 (694)
T ss_dssp SEEEEEETTTTEEE--EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE-EEEECSSTT---SCSSCEEEEEE
T ss_pred CcEEEEECCCCcce--eEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc-ceeeccCCC---CCCCcEEEEEE
Confidence 99999999999877 7788999999999999999999999999 99999986543 333332222 44888999999
Q ss_pred ccCC---EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCC
Q psy12614 212 CADF---TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQG 288 (708)
Q Consensus 212 ~~~~---~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~ 288 (708)
+|++ .+++++.|+.|++||+++++....+.+|...|.+++|+|++++|++++.||.|++||+.+ ++
T Consensus 526 ~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~--------~~--- 594 (694)
T 3dm0_A 526 SPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE--------GK--- 594 (694)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTT--------TE---
T ss_pred eCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC--------Cc---
Confidence 9987 489999999999999999999999999999999999999999999999999999999998 64
Q ss_pred CcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEE
Q psy12614 289 SSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELW 367 (708)
Q Consensus 289 ~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~ 367 (708)
....+ .+...|.+++|+ ...+++++.++.|++||+.+..+.............
T Consensus 595 -----~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~-------------------- 648 (694)
T 3dm0_A 595 -----KLYSL-EANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAE-------------------- 648 (694)
T ss_dssp -----EEECC-BCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC------------------------
T ss_pred -----eEEEe-cCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccc--------------------
Confidence 33333 345679999999 445555566777999999876532211000000000
Q ss_pred EecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEE
Q psy12614 368 SLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLD 432 (708)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~ 432 (708)
.... .-......+...+++++|+|+|++|++|. ||.|++|++.
T Consensus 649 ~~~~----------------------~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 649 KADN----------------------SGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ----------------------------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccc----------------------cccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 0000 00000012223578999999999999955 9999999985
No 72
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=5.5e-35 Score=302.82 Aligned_cols=289 Identities=14% Similarity=0.301 Sum_probs=248.5
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEEC
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~ 98 (708)
.....+|...|.|+++ ++++||+|+.||.|++||+.+++.+. .+.+|. ..|.+++|.+++|++|+.||+|++||+
T Consensus 126 ~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~-~~~~h~--~~v~~l~~~~~~l~sg~~dg~i~vwd~ 200 (435)
T 1p22_A 126 IHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKR-ILTGHT--GSVLCLQYDERVIITGSSDSTVRVWDV 200 (435)
T ss_dssp EECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEE-EECCCS--SCEEEEECCSSEEEEEETTSCEEEEES
T ss_pred EecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEE-EEcCCC--CcEEEEEECCCEEEEEcCCCeEEEEEC
Confidence 3344577888999887 78999999999999999999998876 899999 999999999999999999999999999
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEE-EEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL-YEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
.+++.+..+.+|...|.+++|++ .++++|+.||.|++||+.++... ....+.+|...|.+++| ++++|++++.|
T Consensus 201 ~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg 276 (435)
T 1p22_A 201 NTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR 276 (435)
T ss_dssp SSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred CCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 99999999999999999999974 58999999999999999877643 23567889999999999 78899999999
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCC
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDE 256 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~ 256 (708)
.|++||+.+++.+..+.. +...+.+++|. +..+++|+.||.|++||+++++.+..+.+|...|.+++| ++
T Consensus 277 ~i~vwd~~~~~~~~~~~~-------~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~ 346 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNG-------HKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 346 (435)
T ss_dssp EEEEEETTTCCEEEEEEC-------CSSCEEEEEEE-TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CS
T ss_pred eEEEEECCcCcEEEEEcC-------CCCcEEEEEeC-CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cC
Confidence 999999999999888863 37889999994 346999999999999999999999999999999999998 78
Q ss_pred CEEEEEecCCeEEEEEccCCcccccCCCCCCC-CcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCce
Q psy12614 257 NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQG-SSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTL 334 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~ 334 (708)
++|++|+.||.|++||+.+ +.... .........+.+|.+.|.+++|.+..|++++.||.|++||+.+...
T Consensus 347 ~~l~sg~~dg~i~vwd~~~--------~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 347 KRIVSGAYDGKIKVWDLVA--------ALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp SEEEEEETTSCEEEEEHHH--------HTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC------
T ss_pred CEEEEEeCCCcEEEEECCC--------CCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCCC
Confidence 8999999999999999976 22000 0011145677899999999999999999999999999999987653
No 73
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.3e-35 Score=298.86 Aligned_cols=247 Identities=18% Similarity=0.184 Sum_probs=217.6
Q ss_pred EEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCe------EeEEEeecCCceEEEEEecC----C---CEEEE
Q psy12614 62 DRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLN------IKSSTAVTSGTCWCLSVHKK----K---RLLAA 128 (708)
Q Consensus 62 ~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~------~~~~~~~~~~~v~~~~~s~~----~---~~la~ 128 (708)
...+.+|. ..|.+++|+.++|++++.||.|++||+.+++ ....+.+|...|.+++|+|+ + ++|++
T Consensus 9 ~~~~~~h~--~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 9 ANAGKAHD--ADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEESSCSS--SCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhh--cCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 34778999 9999999999999999999999999999988 78889999999999999999 9 99999
Q ss_pred EeCCCcEEEEEccCCcE-----EEEEecccc-----cccEEEEEEC----CCCCE-EEEecCC-eEEEEEcCC------C
Q psy12614 129 GTEQGHINLFQISDEGL-----LYEKLLDRQ-----QGRILCTAWH----SSGDY-LVTGCAA-AVRVWDIHK------G 186 (708)
Q Consensus 129 ~~~d~~i~iwd~~~~~~-----~~~~~~~~~-----~~~v~~~~~s----~d~~~-l~~~~~d-~i~iwd~~~------~ 186 (708)
++.|+.|++||+.+++. . ..+..| ...|.+++|+ |++++ |++++.| .|++||+.+ +
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIF--EKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEE--EEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EcCCCCEEEEEccCCcccccccc--eeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 99999999999998874 4 567777 5899999999 99999 9999999 999999988 6
Q ss_pred ceEE-----EEEe-----cccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec---c---ccCeEEE
Q psy12614 187 HAIH-----KMSL-----DKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT---H---KKDILAL 250 (708)
Q Consensus 187 ~~~~-----~~~~-----~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~---~---~~~i~~~ 250 (708)
+.+. .+.. . .+...+.+++|+|++.+++++.||.|++||+++++.+..+.. | ...|.++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPM-----TPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp TTTCCCCEEEEEEEECCSS-----SSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEE
T ss_pred ceeeccCcceeeeeecccc-----CCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceE
Confidence 6655 5532 1 347889999999999778899999999999999999999998 8 9999999
Q ss_pred EEeCCCCEEEEEecC---CeEEEEEccCCcccccCCCCCCCCcceEEeEEEec-------------cccceEEEEEe--C
Q psy12614 251 TVSEDENYLYCAGVD---PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI-------------HEGDVKSLALH--G 312 (708)
Q Consensus 251 ~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------------~~~~v~~l~~~--~ 312 (708)
+|+|++++|++++.| +.|++||+.+ ++ ....+.. |...|.+++|+ +
T Consensus 240 ~~~~~~~~l~~~~~d~~~g~i~i~d~~~--------~~--------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 303 (397)
T 1sq9_A 240 KFSPQGSLLAIAHDSNSFGCITLYETEF--------GE--------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 303 (397)
T ss_dssp EECSSTTEEEEEEEETTEEEEEEEETTT--------CC--------EEEEECBC--------CCBSBSSCEEEEEECSSS
T ss_pred EECCCCCEEEEEecCCCCceEEEEECCC--------Cc--------ccceeccCcccccccccccccCCcEEEEEECCCC
Confidence 999999999999999 9999999998 65 5666777 89999999998 8
Q ss_pred CEEEEEcCCCeEEEEeCCCCc
Q psy12614 313 NRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 313 ~~l~s~~~d~~i~iw~~~~~~ 333 (708)
.+|++++.|+.|++||+.+..
T Consensus 304 ~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 304 ETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp SEEEEEETTSEEEEEETTTTE
T ss_pred CEEEEEeCCCeEEEEEcCCCc
Confidence 899999999999999997654
No 74
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6.4e-36 Score=294.92 Aligned_cols=249 Identities=16% Similarity=0.209 Sum_probs=206.3
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe-EEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcEEE
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH-VDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFVNE 95 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~-~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i~v 95 (708)
++.+|.+.|++++|+|+|++||+|+.|++|+|||+.++.. ....+.+|. ..|.+++|+ +++|++++.|++|++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~--~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHE--GPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCS--SCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCC--ccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 5679999999999999999999999999999999988753 334789999 999999996 689999999999999
Q ss_pred EECCCCe--EeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCc-EEEEEecccccccEEEEEECCC----
Q psy12614 96 YDMRRLN--IKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEG-LLYEKLLDRQQGRILCTAWHSS---- 166 (708)
Q Consensus 96 wd~~~~~--~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~s~d---- 166 (708)
||+++++ ....+.+|...|.+++|+|+ +.+|++|+.|+.|++||+..+. ......+.+|...|.+++|+|+
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG 165 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence 9999874 66778899999999999998 7899999999999999998763 3222567789999999999998
Q ss_pred -------------CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-----EEEEEcCCCcEE
Q psy12614 167 -------------GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-----TIITGDSGGFVR 227 (708)
Q Consensus 167 -------------~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~l~~~~~dg~i~ 227 (708)
+++|++++.| .|++||+..+.......... +|...|.+++|+|++ .+++++.||.|+
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~----~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~ 241 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE----AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF 241 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB----CCSSCEEEEECCCCSSCSCCEEEEEETTCEEE
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc----cCCCceEEEEecCCCCCCCceEEEEcCCCeEE
Confidence 4789999999 99999997653222221111 458899999999985 499999999999
Q ss_pred EEeCCCC---e-eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 228 FWDGKTG---V-QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 228 ~wd~~~~---~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+|++.+. . ....+..|...|.+++|+|++++|++++.|+.|++|+...
T Consensus 242 iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 242 IWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 9998763 1 2234566889999999999999999999999999999864
No 75
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-34 Score=296.37 Aligned_cols=280 Identities=19% Similarity=0.282 Sum_probs=240.5
Q ss_pred CCCCc--EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECC
Q psy12614 24 PEPKV--INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMR 99 (708)
Q Consensus 24 ~h~~~--v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~ 99 (708)
+|... +.+++|++ ..+++++.||.|++||+.+++........|. ..|.+++|+ +++|++++.||.|++||+.
T Consensus 89 ~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~--~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDES--TYVASVKWSHDGSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp TCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTT--CCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCC--CCEEEEEECCCCCEEEEECCCCeEEEEECc
Confidence 55554 34466664 5678888899999999999998773444477 999999999 8999999999999999999
Q ss_pred CCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC-CcEEEEEecccccccEEEEEECCCCCEEEEecCC-e
Q psy12614 100 RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-A 177 (708)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~ 177 (708)
+++.+..+.+|...|.+++| ++++|++++.||.|++||+.. +... ..+.+|.+.|.+++|+|++++|++++.| .
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 240 (401)
T 4aez_A 165 SQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQI--GTLQGHSSEVCGLAWRSDGLQLASGGNDNV 240 (401)
T ss_dssp TCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEE--EEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCccee--eEEcCCCCCeeEEEEcCCCCEEEEEeCCCe
Confidence 99999999999999999999 457999999999999999984 4444 6788899999999999999999999999 9
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEc--CCCcEEEEeCCCCeeEEEeeccccCeEEEEEe
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGD--SGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s 253 (708)
|++||+.+++.+..+.. +...|.+++|+|++. +++++ .|+.|++||+.+++.+..+. +...|.+++|+
T Consensus 241 v~iwd~~~~~~~~~~~~-------~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s 312 (401)
T 4aez_A 241 VQIWDARSSIPKFTKTN-------HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWS 312 (401)
T ss_dssp EEEEETTCSSEEEEECC-------CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEC
T ss_pred EEEccCCCCCccEEecC-------CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEEC
Confidence 99999999988877753 378899999999873 55554 79999999999999988886 67889999999
Q ss_pred CCCCEEEEEe--cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 254 EDENYLYCAG--VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 254 ~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
|+++++++++ .||.|++|++.+ ++ ......+.+|...|.+++|+ +.+|++++.||.|++|++
T Consensus 313 ~~~~~l~~~~g~~dg~i~v~~~~~--------~~------~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 313 PHSKEIMSTHGFPDNNLSIWSYSS--------SG------LTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRV 378 (401)
T ss_dssp SSSSEEEEEECTTTCEEEEEEEET--------TE------EEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEEC
T ss_pred CCCCeEEEEeecCCCcEEEEecCC--------cc------ceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 9999999954 899999999987 42 33445577899999999999 889999999999999999
Q ss_pred CCCc
Q psy12614 330 PPKT 333 (708)
Q Consensus 330 ~~~~ 333 (708)
.+..
T Consensus 379 ~~~~ 382 (401)
T 4aez_A 379 YDGD 382 (401)
T ss_dssp CC--
T ss_pred CCCc
Confidence 8765
No 76
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.4e-35 Score=298.08 Aligned_cols=304 Identities=9% Similarity=0.033 Sum_probs=224.0
Q ss_pred ccCeEEEEEeCCCCEEEEEecC-------CeEEEEEccCCcccccCCCCCCCCc--ceEEeEEEeccccceEEEEEeCCE
Q psy12614 244 KKDILALTVSEDENYLYCAGVD-------PTVVCFQRTRKPQVCSTSGPEQGSS--VWVRSVNRVIHEGDVKSLALHGNR 314 (708)
Q Consensus 244 ~~~i~~~~~s~~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~ 314 (708)
..+|.+++|+||+++|++|+.+ +.|++|++.. +...... .......+..|...|.+++++++.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~--------~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~ 85 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDP--------TKDTEKEQFHILSEFALEDNDDSPTAIDASKGI 85 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECT--------TSSSHHHHEEEEEEEECCTTSCCCCEEEEETTE
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcC--------CCcceeeeeeeeeEEEccCCCCceEEEEeCCCE
Confidence 4689999999999999998754 3599999987 3211111 112234567888899999999999
Q ss_pred EEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceE
Q psy12614 315 LYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRL 394 (708)
Q Consensus 315 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (708)
++++..++..++|+.. .++.+++|++.... ....
T Consensus 86 ~~~g~~~~~~~l~s~~-----------------------------~d~~~r~~~~~~~~-----------------~~~~ 119 (365)
T 4h5i_A 86 ILVGCNENSTKITQGK-----------------------------GNKHLRKFKYDKVN-----------------DQLE 119 (365)
T ss_dssp EEEECCCCHHHHHHTS-----------------------------CCCCEEEEEEETTT-----------------TEEE
T ss_pred EEEEECCCccEEEEec-----------------------------CCCcEEEEEecCCC-----------------ceEE
Confidence 9988776655544332 23344555554432 0011
Q ss_pred EEEEE-----ecCCCceEEEEeCCCCcEEEE--E-cCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCe
Q psy12614 395 IVKMS-----AVNNATIRCSVVSNDGKYVAY--S-TESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTL 466 (708)
Q Consensus 395 ~~~~~-----~~~~~~i~~~~~s~~g~~l~~--~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~ 466 (708)
..... ..+...+.+++|||||+++++ + .|++|+|||+.+ .. .... + .|.. .|.+++|+|||++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~--~~-~~~~---~-~~~~--~V~~v~fspdg~~ 190 (365)
T 4h5i_A 120 FLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD--LT-EKFE---I-ETRG--EVKDLHFSTDGKV 190 (365)
T ss_dssp EEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT--TE-EEEE---E-ECSS--CCCEEEECTTSSE
T ss_pred EeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC--Cc-EEEE---e-CCCC--ceEEEEEccCCce
Confidence 11111 123456889999999999875 3 389999999876 32 2222 2 2322 5777999999999
Q ss_pred EEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCC----eEEEEECCce------eeec
Q psy12614 467 LLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKS----HVVIWKNGQH------HASL 535 (708)
Q Consensus 467 l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~----~i~iw~~~~~------~~~~ 535 (708)
+++++.++. +|....+.. +... ...+| ...|.+++|+|+++++++++.|+ .+++|++... ...+
T Consensus 191 l~s~s~~~~~~~~~~~~~~--~~~~-~~~~~--~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~ 265 (365)
T 4h5i_A 191 VAYITGSSLEVISTVTGSC--IARK-TDFDK--NWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQV 265 (365)
T ss_dssp EEEECSSCEEEEETTTCCE--EEEE-CCCCT--TEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEeccceeEEEEEeccCcc--eeee-ecCCC--CCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeee
Confidence 999987777 777766632 2221 22345 77899999999999999999887 6888988722 2367
Q ss_pred CCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchh-hhcCCCCeeEEEeCCCCCceEEEEcCe
Q psy12614 536 PRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQLPVLGIEFDPQDSSLIYLMDDS 614 (708)
Q Consensus 536 ~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~l~~s~~~~~l~~~~~d~ 614 (708)
.+|...|++++|+|||++||+|+.|++|+|||+.++++. .. +.+|...|++|+|+|||++||+++.|+
T Consensus 266 ~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~-----------~~~~~gH~~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 266 TNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMS-----------KIFKQAHSFAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp ESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE-----------EEETTSSSSCEEEEEECTTSCEEEEEETTS
T ss_pred cCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEE-----------EEecCcccCCEEEEEECCCCCEEEEEeCCC
Confidence 889999999999999999999999999999999998765 33 468999999999999999999999999
Q ss_pred eEEEEecCCCCC
Q psy12614 615 ALCVINKNKSLA 626 (708)
Q Consensus 615 ~i~~wd~~~~~~ 626 (708)
+|+|||+.....
T Consensus 335 tvrvw~ip~~~~ 346 (365)
T 4h5i_A 335 TIHIIKLPLNYA 346 (365)
T ss_dssp EEEEEECCTTTT
T ss_pred eEEEEEcCCCCc
Confidence 999999965443
No 77
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-36 Score=314.07 Aligned_cols=317 Identities=10% Similarity=0.076 Sum_probs=227.2
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCCeE---EEEEecCCCCCcEEEEEEe-C-------CEEEEEcCCCcEEEEECCCCe
Q psy12614 34 CEPKSSRLAVSRADQSIEIWDISETPHV---DRVFIGDPLSNSIECLTWF-N-------DRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 34 ~s~~~~~la~~~~dg~v~iwd~~~~~~~---~~~~~~h~~~~~v~~l~~~-~-------~~l~s~~~d~~i~vwd~~~~~ 102 (708)
.+|+++++|+++.|++|+|||+.+++.. ...+.+|. +.|.+++|+ . ++||+++.||+|++||+.++.
T Consensus 169 ~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~--~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~ 246 (524)
T 2j04_B 169 LNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSF--GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNA 246 (524)
T ss_dssp -------------CEEEEEEEEETTTCCEEEEEEEEECC--CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCS
T ss_pred cchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecC--CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCc
Confidence 3688889999999999999999887642 12567788 899999999 3 599999999999999998764
Q ss_pred E-----------eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEE--EECCCC-C
Q psy12614 103 I-----------KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCT--AWHSSG-D 168 (708)
Q Consensus 103 ~-----------~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~--~~s~d~-~ 168 (708)
. ...+.+|...|++++|++++ .||+|+.||+|++||++++... ...+.+|...|.++ +|+|++ +
T Consensus 247 ~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~-~~~~~~H~~~V~sv~~~~s~~g~~ 324 (524)
T 2j04_B 247 TDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVP-SFYDQVHDSYILSVSTAYSDFEDT 324 (524)
T ss_dssp SSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSC-SEEEECSSSCEEEEEEECCTTSCC
T ss_pred cccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCc-eEEeecccccEEEEEEEcCCCCCe
Confidence 2 34678899999999999864 8999999999999999976432 14578899999999 678888 8
Q ss_pred EEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccC
Q psy12614 169 YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKD 246 (708)
Q Consensus 169 ~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 246 (708)
+||+++.| +|++||+++++.+..+.... ....+.+++|+|+++ +++++.|+.|++||++++.++..+.+|...
T Consensus 325 ~laS~S~D~tvklWD~~~~~~~~~~~~~~-----~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~ 399 (524)
T 2j04_B 325 VVSTVAVDGYFYIFNPKDIATTKTTVSRF-----RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETT 399 (524)
T ss_dssp EEEEEETTSEEEEECGGGHHHHCEEEEEC-----SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSC
T ss_pred EEEEeccCCeEEEEECCCCCccccccccc-----ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCc
Confidence 99999999 99999999888766554321 123478999999984 899999999999999999988888999999
Q ss_pred eEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeE
Q psy12614 247 ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYL 324 (708)
Q Consensus 247 i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i 324 (708)
|.+++|+|++++|++|+.||+|++||... +.-.. . .......+...+.+++|+ ++.+ ....+..+
T Consensus 400 V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~--------~~~~~---~-~~~~~~~~~~~v~~v~~sp~g~~~-~~~~~~~~ 466 (524)
T 2j04_B 400 ITAIGVSRLHPMVLAGSADGSLIITNAAR--------RLLHG---I-KNSSATQKSLRLWKWDYSIKDDKY-RIDSSYEV 466 (524)
T ss_dssp EEEEECCSSCCBCEEEETTTEEECCBSCS--------STTTC---C-------CCCCEEEECBCCSSSCEE-EECCCCCC
T ss_pred eEEEEeCCCCCeEEEEECCCEEEEEechH--------hhccc---c-ccCccceeeeEEEEeccCCCCCeE-EccCCcee
Confidence 99999999999999999999999999876 21000 0 000000122246678887 4433 33222223
Q ss_pred EEEeCCCCceeecCccCCCCceEEEEcCCc---EEEEE-cCCeEEEEEecCC
Q psy12614 325 SLSYYPPKTLVKYPCTLAQSTPVSLAKDIQ---HVLLQ-YTSHLELWSLGSA 372 (708)
Q Consensus 325 ~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~---~l~~~-~~~~i~i~~~~~~ 372 (708)
..|+..+..+..+.++...+.+++|+|++. .++++ .++.|+||++...
T Consensus 467 ~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 467 YPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred cccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 223333444556666677889999999964 88886 6699999998763
No 78
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-33 Score=286.33 Aligned_cols=301 Identities=13% Similarity=0.172 Sum_probs=246.9
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI 140 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~ 140 (708)
..+.+|. ..|++++|+ +++|++++.||.|++||+.+++.+..+.+|.+.|.+++|+|++++|++++.|+.|++||+
T Consensus 26 ~~l~~h~--~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 26 IKLTGHE--RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEECCS--SCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred EEEEEee--ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 4789999 999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEEecccccccEEEEEECCCCCEEEEecCC------eEEEEEcCCCceEEEEEeccc-------CCCCCceeEE
Q psy12614 141 SDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA------AVRVWDIHKGHAIHKMSLDKS-------SKFSKNTAVW 207 (708)
Q Consensus 141 ~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d------~i~iwd~~~~~~~~~~~~~~~-------~~~~~~~~v~ 207 (708)
.+++.. ..+. +...+.+++|+|+++++++++.+ .|.+||+..+.....+..... .+ .....+.
T Consensus 104 ~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 179 (369)
T 3zwl_B 104 SNGQCV--ATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITH-EGLDAAT 179 (369)
T ss_dssp TTCCEE--EEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECC-TTCCCEE
T ss_pred CCCcEE--EEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCC-cCcccee
Confidence 999887 3444 78899999999999999988764 899999987643222221110 00 1123899
Q ss_pred EEEEccCCE-EEEEcCCCcEEEEeCCC-CeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCC
Q psy12614 208 CVAFCADFT-IITGDSGGFVRFWDGKT-GVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGP 285 (708)
Q Consensus 208 ~~~~~~~~~-l~~~~~dg~i~~wd~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~ 285 (708)
+++|+|++. +++++.+|.|++||+.+ ++.+..+..|...|.+++|+|++++|++++.|+.|++||+.+ ++
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~--------~~ 251 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST--------LQ 251 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--------CC
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC--------Cc
Confidence 999999995 88999999999999998 788889999999999999999999999999999999999998 65
Q ss_pred CCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCe
Q psy12614 286 EQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSH 363 (708)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~ 363 (708)
....+. +...+.+++|+ +..+++++.++...+|...... ....
T Consensus 252 --------~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------------------------~~~~ 296 (369)
T 3zwl_B 252 --------VLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANE--------------------------GKFE 296 (369)
T ss_dssp --------EEEEEE-CSSCEEEEEECSSSSEEEEEECCC---------------------------------------CE
T ss_pred --------eeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCC--------------------------Ccce
Confidence 344443 77889999999 8999999998877666543211 1235
Q ss_pred EEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 364 LELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 364 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
+.+|+..+++ .......|...|.+++|+|++++|+++. ||.|++|++..
T Consensus 297 i~~~d~~~~~---------------------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 297 ARFYHKIFEE---------------------EIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp EEEEETTTCC---------------------EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred eEEEecCCCc---------------------chhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 7888887755 3444567889999999999999999855 99999999986
No 79
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=3.2e-34 Score=329.13 Aligned_cols=479 Identities=10% Similarity=0.043 Sum_probs=346.5
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCC------CcEEEEeCCCCCeEEEEEecCCCCCcE-------EEEEEe--C
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRAD------QSIEIWDISETPHVDRVFIGDPLSNSI-------ECLTWF--N 81 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~d------g~v~iwd~~~~~~~~~~~~~h~~~~~v-------~~l~~~--~ 81 (708)
...+.+.+|+..|.+++|||||++||+++.+ ..|.+||+.+++. +.+.+|. ..+ .+++|+ |
T Consensus 43 g~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~--~~lt~~~--~~~~~~~~~~~~~~~SpDg 118 (1045)
T 1k32_A 43 GSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI--KRITYFS--GKSTGRRMFTDVAGFDPDG 118 (1045)
T ss_dssp CCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE--EECCCCC--EEEETTEECSEEEEECTTC
T ss_pred CcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCe--EEcccCC--CcccccccccccccCCCCC
Confidence 3456677899999999999999999987543 3799999988763 3788888 888 999999 7
Q ss_pred CEEEEEcCC------CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC------------CCcEEEEEccC-
Q psy12614 82 DRLFSGGLQ------GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE------------QGHINLFQISD- 142 (708)
Q Consensus 82 ~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~------------d~~i~iwd~~~- 142 (708)
+.+++++.+ ..|.+||+.+++....... ....++|+| | ++++++. +....+|....
T Consensus 119 ~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~---~~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~ 193 (1045)
T 1k32_A 119 NLIISTDAMQPFSSMTCLYRVENDGINFVPLNLG---PATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNS 193 (1045)
T ss_dssp CEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSC---SCSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEET
T ss_pred EEEEEECCcCCCcccceEEEEECCCCCeEEecCC---CcceeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECCC
Confidence 777777754 4688888888775433322 234677999 8 8888753 23456665433
Q ss_pred CcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCCE-EEE
Q psy12614 143 EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IIT 219 (708)
Q Consensus 143 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~ 219 (708)
++. ..+.+|...+.++.|+++ ..+++++.+ .+.+|.+.. +.....+... ..+...+|+|||+ ++.
T Consensus 194 ~~~---~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~--------~~~~~~~~SpDG~~la~ 261 (1045)
T 1k32_A 194 GAF---KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSF--------TDYYPRHLNTDGRRILF 261 (1045)
T ss_dssp TEE---EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCC--------CSSCEEEEEESSSCEEE
T ss_pred CCe---EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCC--------CCcceeeEcCCCCEEEE
Confidence 433 445889999999999988 566677777 888887653 3334443321 2345679999997 555
Q ss_pred EcCCCcEEEEeCCCCeeEEEeec-----------cccCeEEEEEe-CCCCEEEEEecCCeEEEEEccCCcccccCCCCCC
Q psy12614 220 GDSGGFVRFWDGKTGVQWSDVKT-----------HKKDILALTVS-EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQ 287 (708)
Q Consensus 220 ~~~dg~i~~wd~~~~~~~~~~~~-----------~~~~i~~~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~ 287 (708)
+ .++.|++||+... .+..+.. |...+.+++|+ |||++|++++ ++.+.+|+... ++
T Consensus 262 ~-~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~--------~~-- 328 (1045)
T 1k32_A 262 S-KGGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSG--------TY-- 328 (1045)
T ss_dssp E-ETTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTS--------SB--
T ss_pred E-eCCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCC--------Cc--
Confidence 5 6899999999544 3445544 34478999999 9999999887 78999999987 53
Q ss_pred CCcceEEeEEEecccc-ceEEEEEe-CCEEEEEcCCCeEE-EEeCCCCceeecCccCCCCceEEEEcCCcEEEEE-cCCe
Q psy12614 288 GSSVWVRSVNRVIHEG-DVKSLALH-GNRLYSGGLDSYLS-LSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ-YTSH 363 (708)
Q Consensus 288 ~~~~~~~~~~~~~~~~-~v~~l~~~-~~~l~s~~~d~~i~-iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~ 363 (708)
...+..|.. .+..++|+ ++.|++++.+..+. +|++.+.....+..+......++++|||+.++++ .++.
T Consensus 329 -------~~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~ 401 (1045)
T 1k32_A 329 -------VLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFE 401 (1045)
T ss_dssp -------EEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSE
T ss_pred -------eEEccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCe
Confidence 334556666 78888888 66788888888898 9999888766666344556789999999999874 7789
Q ss_pred EEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-C----------CceEEEEEE
Q psy12614 364 LELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-E----------SCVRLHSLD 432 (708)
Q Consensus 364 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d----------~~i~i~~~~ 432 (708)
+.+||+.+++ +..+...+...+.+++|||||++|+++. + +.|++||+.
T Consensus 402 v~~~d~~tg~---------------------~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 402 IMTVDLETGK---------------------PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp EEEEETTTCC---------------------EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred EEEEECCCCc---------------------eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 9999998765 3444446778889999999999998743 3 489999987
Q ss_pred ecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCe-----EEEEE----------------
Q psy12614 433 LDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSL-----EIKYC---------------- 489 (708)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~-----~~~~~---------------- 489 (708)
. +. ... +..+.. .+.+++|+|||++|++++.++. +|+....+. ..+..
T Consensus 461 ~--g~--~~~---l~~~~~--~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (1045)
T 1k32_A 461 G--RK--IFA---ATTENS--HDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPR 531 (1045)
T ss_dssp T--TE--EEE---CSCSSS--BEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCG
T ss_pred C--Cc--EEE---eeCCCc--ccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcC
Confidence 5 22 332 555543 4556899999999999887655 554322111 00000
Q ss_pred ----------e-------cCCCCCccCcceEEEEECCCCcEEEE-------------EecCCeEEEEECCceee-ecCCC
Q psy12614 490 ----------V-------DPYKSNLMSDVISLVQMSECKQYIVC-------------ADRKSHVVIWKNGQHHA-SLPRY 538 (708)
Q Consensus 490 ----------~-------~~~~~~~~~~~i~~~~~s~~~~~l~~-------------~~~d~~i~iw~~~~~~~-~~~~~ 538 (708)
+ .....+ ...+..++++|||+++++ ......|.+||+.+... .+.
T Consensus 532 ~~~~~~~~~d~~g~~~~~~~l~~~--~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-- 607 (1045)
T 1k32_A 532 SMTSEAGEYDLNDMYKRSSPINVD--PGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK-- 607 (1045)
T ss_dssp GGSCCCCCCCCTTGGGGCEECSCC--CBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE--
T ss_pred ccccccccccccCHhHceEEcCCC--CCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEee--
Confidence 0 001112 467889999999998885 12355788889885443 333
Q ss_pred CCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCC
Q psy12614 539 RKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKA 572 (708)
Q Consensus 539 ~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~ 572 (708)
..+.+++|||||++|++++.+ .|++||+.+++
T Consensus 608 -~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 608 -NNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp -EEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred -cCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence 668899999999999988766 79999998876
No 80
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-33 Score=278.11 Aligned_cols=286 Identities=15% Similarity=0.209 Sum_probs=244.9
Q ss_pred eCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC
Q psy12614 54 DISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ 132 (708)
Q Consensus 54 d~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d 132 (708)
|..++..+...+.+|. +.|.+++|. +++|++++.||.|++||+.+++....+..|...|.+++|+|++++|++++.|
T Consensus 3 d~~~~~~~~~~l~~h~--~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 80 (313)
T 3odt_A 3 DPFTGYQLSATLKGHD--QDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD 80 (313)
T ss_dssp --CCCCEEEEEECCCS--SCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT
T ss_pred CccccHHHHHHhhCCC--CCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC
Confidence 4455555566999999 999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEccCC---cEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEE
Q psy12614 133 GHINLFQISDE---GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWC 208 (708)
Q Consensus 133 ~~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 208 (708)
+.|++|++... +.. ..+.+|...|.+++| ++++|++++.| .|++|| .++....+.. +...+.+
T Consensus 81 g~i~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~-------~~~~v~~ 147 (313)
T 3odt_A 81 TMINGVPLFATSGEDPL--YTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQA-------HNASVWD 147 (313)
T ss_dssp SCEEEEETTCCTTSCC---CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEEC-------CSSCEEE
T ss_pred CeEEEEEeeecCCCCcc--cchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEeccc-------CCCceeE
Confidence 99999998764 333 567889999999999 67899999999 999999 6666666653 3788999
Q ss_pred EEEcc-CC-EEEEEcCCCcEEEEeCCCCeeEEEeec-cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCC
Q psy12614 209 VAFCA-DF-TIITGDSGGFVRFWDGKTGVQWSDVKT-HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGP 285 (708)
Q Consensus 209 ~~~~~-~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~ 285 (708)
++|.| ++ .+++++.||.|++|| .++....+.. |...+.+++|+|++. +++++.||.|++||+.+ ++
T Consensus 148 ~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~--------~~ 216 (313)
T 3odt_A 148 AKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT--------GD 216 (313)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT--------CC
T ss_pred EEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc--------hh
Confidence 99988 55 599999999999999 4666677776 899999999999997 99999999999999998 66
Q ss_pred CCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeE
Q psy12614 286 EQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHL 364 (708)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i 364 (708)
....+..|...|.+++|+ ...+++++.|+.|++||+.+..
T Consensus 217 --------~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~------------------------------- 257 (313)
T 3odt_A 217 --------VLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGS------------------------------- 257 (313)
T ss_dssp --------EEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCC-------------------------------
T ss_pred --------hhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCc-------------------------------
Confidence 677788999999999999 4479999999999999886542
Q ss_pred EEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEec
Q psy12614 365 ELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLD 434 (708)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~ 434 (708)
.......+...|.+++|+|++++++++.|+.|++|++..+
T Consensus 258 ------------------------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 258 ------------------------------LKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp ------------------------------EEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGG
T ss_pred ------------------------------eeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCC
Confidence 2223335667899999999999777678999999999873
No 81
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.6e-34 Score=290.95 Aligned_cols=323 Identities=8% Similarity=0.048 Sum_probs=250.8
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe--EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN--IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd 139 (708)
.+..|. .+|.+++|+ +++|++++.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 3 ~~~~~~--~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 3 YHSFLV--EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp EEESCS--SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred eecccC--CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEE
Confidence 455677 999999999 8899999999999999999988 8889999999999999999999999999999999999
Q ss_pred ccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E
Q psy12614 140 ISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I 217 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l 217 (708)
+.+++......+..|...|.+++|+|++++|++++.+ .|++||+..+........... .+...|.+++|+|++. +
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l 157 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK---PIRSTVLSLDWHPNSVLL 157 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECT---TCCSCEEEEEECTTSSEE
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeec---ccCCCeeEEEEcCCCCEE
Confidence 9999876556678899999999999999999999999 999999998874322222211 3478899999999995 8
Q ss_pred EEEcCCCcEEEEeC------------------CCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCccc
Q psy12614 218 ITGDSGGFVRFWDG------------------KTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQV 279 (708)
Q Consensus 218 ~~~~~dg~i~~wd~------------------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 279 (708)
++++.||.|++||+ ..++.+..+..|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 158 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---- 233 (372)
T 1k8k_C 158 AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADK---- 233 (372)
T ss_dssp EEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGG----
T ss_pred EEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCC----
Confidence 99999999999995 46788889989999999999999999999999999999999998
Q ss_pred ccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCC--CceeecCccCCCCceEEEEcCCcE
Q psy12614 280 CSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPP--KTLVKYPCTLAQSTPVSLAKDIQH 355 (708)
Q Consensus 280 ~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~--~~~~~~~~~~~~~~~~~~s~~~~~ 355 (708)
++ ....+..|...|.+++|+ +.+++++ .|+.+++|++.. +..............
T Consensus 234 ----~~--------~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~--------- 291 (372)
T 1k8k_C 234 ----KM--------AVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQS--------- 291 (372)
T ss_dssp ----TT--------EEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC------------
T ss_pred ----Cc--------eeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccc---------
Confidence 76 677888999999999999 5555554 999999999977 432221100000000
Q ss_pred EEEEcCCeEEEE---EecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeC-CCC---cEEEEE-cCCceE
Q psy12614 356 VLLQYTSHLELW---SLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVS-NDG---KYVAYS-TESCVR 427 (708)
Q Consensus 356 l~~~~~~~i~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~g---~~l~~~-~d~~i~ 427 (708)
.......+.+| +..... . ..+.....+..+|...|.+++|. ++| .+|+++ .||.|+
T Consensus 292 -~~~~~~~~~~~~~~~~~~~~--------~-------~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~ 355 (372)
T 1k8k_C 292 -SQRGLTARERFQNLDKKASS--------E-------GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMS 355 (372)
T ss_dssp ------CHHHHHHHCCCCC------------------------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEE
T ss_pred -hhhhcchhhhhhhccccccc--------c-------cCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceE
Confidence 00011112233 111100 0 00000022234788999999865 777 899985 599999
Q ss_pred EEEEEe
Q psy12614 428 LHSLDL 433 (708)
Q Consensus 428 i~~~~~ 433 (708)
+|++.+
T Consensus 356 ~W~~~~ 361 (372)
T 1k8k_C 356 IWDVRS 361 (372)
T ss_dssp EEEHHH
T ss_pred EEEecC
Confidence 999876
No 82
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=280.33 Aligned_cols=275 Identities=20% Similarity=0.260 Sum_probs=234.3
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEe--cCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEe
Q psy12614 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFI--GDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIK 104 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~--~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~ 104 (708)
.++|+||+++ +||+|. |++|+|||+.+++.+. .+. +|. ..|.+++|+ +++|++|+.||+|++||+++++++
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~-~~~~~~~~--~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQ-LLQMEQPG--EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEE-EEECCSTT--CCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEE-EEEecCCC--CeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE
Confidence 4679999986 888876 8999999999998876 554 555 889999999 899999999999999999999999
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEc
Q psy12614 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDI 183 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~ 183 (708)
..+.+|...+.++.+ ++..+++++.++.+++|+........ ..+.+|...+..+.|++++++|++++.| .|++||+
T Consensus 103 ~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 103 RNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHV-ATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp EEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEE-EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred EEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeE-EEEcCccCceEEEEEcCCCCEEEEEecCcceeEEEC
Confidence 999999998876555 56799999999999999988765442 6778899999999999999999999999 9999999
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEEEccCCE----EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEE
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT----IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYL 259 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 259 (708)
.+++.......... .+...|.+++++|++. +++++.++.|++||........... +...+..+.|+|+++.+
T Consensus 180 ~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~ 255 (318)
T 4ggc_A 180 APGEGGWVPLQTFT---QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKEL 255 (318)
T ss_dssp SCBTTBSCCSEEEC---CCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEE
T ss_pred CCCcccccceeeec---ccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccce
Confidence 88764322221111 3377899999999773 3467788999999998887766654 67889999999999988
Q ss_pred EEEe--cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 260 YCAG--VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 260 ~~~~--~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
++++ .|+.|++||+.+ ++ ....+.+|.+.|++++|+ +.+|++++.|++|++||+.+
T Consensus 256 ~~~sg~~d~~i~iwd~~~--------~~--------~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 256 ISGHGFAQNQLVIWKYPT--------MA--------KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEECTTTCCEEEEETTT--------CC--------EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEEcCCCEEEEEECCC--------Cc--------EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 8765 789999999998 76 778899999999999999 88999999999999999864
No 83
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-34 Score=291.72 Aligned_cols=251 Identities=15% Similarity=0.211 Sum_probs=217.1
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC--CCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCc
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISE--TPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGF 92 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~--~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~ 92 (708)
+..+.+|.+.|++++|+|++++||+|+.||.|+|||+.. ++.+ ..+.+|. ..|.+++|+ +++|++++.||.
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~h~--~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLI-DTLTGHE--GPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEE-EEECCCS--SCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceee-eEecCCC--CcEEEEEeCCCCCCCEEEEeccCCE
Confidence 456789999999999999999999999999999999984 3444 3788999 999999997 789999999999
Q ss_pred EEEEECCCCe--EeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC---
Q psy12614 93 VNEYDMRRLN--IKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS--- 165 (708)
Q Consensus 93 i~vwd~~~~~--~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~--- 165 (708)
|++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||+.++.......+..|...|.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 9999999987 77788889999999999999 9999999999999999999875443356778999999999999
Q ss_pred ----------CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC---CE-EEEEcCCCcEEEEe
Q psy12614 166 ----------SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD---FT-IITGDSGGFVRFWD 230 (708)
Q Consensus 166 ----------d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~-l~~~~~dg~i~~wd 230 (708)
++.+|++++.| .|++||+.++........... .|...|.+++|+|+ +. +++++.||.|++||
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE---GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC---CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe---cccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 69999999999 999999988764433322211 34889999999999 75 89999999999999
Q ss_pred CCCCe---eEEE--eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 231 GKTGV---QWSD--VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 231 ~~~~~---~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+.++. .... ...|...|.+++|+|++++|++++.||.|++|++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 238 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 98864 2222 334888999999999999999999999999999986
No 84
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-35 Score=305.16 Aligned_cols=357 Identities=10% Similarity=0.060 Sum_probs=258.8
Q ss_pred EEECCCCeEeEEE-eecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccC---CcEEEEEecccccccEEEEEECCCCCE
Q psy12614 95 EYDMRRLNIKSST-AVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISD---EGLLYEKLLDRQQGRILCTAWHSSGDY 169 (708)
Q Consensus 95 vwd~~~~~~~~~~-~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~---~~~~~~~~~~~~~~~v~~~~~s~d~~~ 169 (708)
.|+ .+++.+..+ .+|.+.|++++|+| ++++||+|+.||.|++||+.+ +..........|...|.+++|+|++++
T Consensus 47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 125 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDA 125 (437)
T ss_dssp GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSE
T ss_pred ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCE
Confidence 377 456778888 88999999999999 999999999999999999976 431100111258999999999999999
Q ss_pred EEEecCC-eEEEEEcC---CCceEEEEEecccCC--C-C--CceeEEEEE--EccCCE-EEEEcCCCcEEEEeCCCCeeE
Q psy12614 170 LVTGCAA-AVRVWDIH---KGHAIHKMSLDKSSK--F-S--KNTAVWCVA--FCADFT-IITGDSGGFVRFWDGKTGVQW 237 (708)
Q Consensus 170 l~~~~~d-~i~iwd~~---~~~~~~~~~~~~~~~--~-~--~~~~v~~~~--~~~~~~-l~~~~~dg~i~~wd~~~~~~~ 237 (708)
|++++.| .|++||+. +++............ + . +...+.++. +++++. +++++.||.|++||+++++.+
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 205 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL 205 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee
Confidence 9999999 99999995 555544333110000 0 0 255666666 557775 899999999999999999999
Q ss_pred EEeec--cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe-ccccceEEEEEe---
Q psy12614 238 SDVKT--HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-IHEGDVKSLALH--- 311 (708)
Q Consensus 238 ~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~~l~~~--- 311 (708)
..+.+ |...|.+++|+|++++|++++.||.|++||++. ++ ....+. .|...|.+++++
T Consensus 206 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~--------~~--------~~~~~~~~~~~~v~~~~~~~~~ 269 (437)
T 3gre_A 206 QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF--------NV--------LIRSWSFGDHAPITHVEVCQFY 269 (437)
T ss_dssp EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT--------TE--------EEEEEBCTTCEEEEEEEECTTT
T ss_pred EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC--------cc--------EEEEEecCCCCceEEEEecccc
Confidence 99988 899999999999999999999999999999998 64 455554 777889999665
Q ss_pred ---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccC
Q psy12614 312 ---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPL 388 (708)
Q Consensus 312 ---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 388 (708)
+.+|++++.|+.|++||+.+..
T Consensus 270 s~~~~~l~s~~~dg~i~iwd~~~~~------------------------------------------------------- 294 (437)
T 3gre_A 270 GKNSVIVVGGSSKTFLTIWNFVKGH------------------------------------------------------- 294 (437)
T ss_dssp CTTEEEEEEESTTEEEEEEETTTTE-------------------------------------------------------
T ss_pred CCCccEEEEEcCCCcEEEEEcCCCc-------------------------------------------------------
Confidence 4488999999999998886543
Q ss_pred CCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCc--ccccceeEEEEEecCCCe
Q psy12614 389 LSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPA--PLFKSIFTHVLISADSTL 466 (708)
Q Consensus 389 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~s~d~~~ 466 (708)
.......+...+..+.|+|+++.+ .+.. +.+ |.. .|++++|+ ++++
T Consensus 295 ------~~~~~~~~~~~~~~~~~~~~~~~l---~~~~--------------------~~~~~~~~--~v~~l~~~-~~~~ 342 (437)
T 3gre_A 295 ------CQYAFINSDEQPSMEHFLPIEKGL---EELN--------------------FCGIRSLN--ALSTISVS-NDKI 342 (437)
T ss_dssp ------EEEEEESSSSCCCGGGGSCBCSSG---GGCC--------------------CCCCCSGG--GGCCEEEE-TTEE
T ss_pred ------EEEEEEcCCCCCccceeccccccc---ccce--------------------ecccccCC--ceEEEEEC-CceE
Confidence 222333555666667777776544 0000 222 333 56668898 7788
Q ss_pred EEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECC--ceeeecCCCCCCc
Q psy12614 467 LLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG--QHHASLPRYRKPS 542 (708)
Q Consensus 467 l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~v 542 (708)
|++++.|+. +|++..+ +....+..+... ...+....++++..+++.. |+.. ........|...|
T Consensus 343 l~s~~~d~~i~~wd~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~h~~~I 410 (437)
T 3gre_A 343 LLTDEATSSIVMFSLNEL--SSSKAVISPSRF--SDVFIPTQVTANLTMLLRK--------MKRTSTHSVDDSLYHHDII 410 (437)
T ss_dssp EEEEGGGTEEEEEETTCG--GGCEEEECC--C--CCEEEEEEEETTEEEEEEE--------CC-------------CCCE
T ss_pred EEecCCCCeEEEEECCCc--ccceEEeccccc--CceEEEEEeecceEEEEEe--------cccccccccCcccccccce
Confidence 888988888 7777665 444555544333 5566777777776666555 1111 2223556799999
Q ss_pred eEEEEcCC--CCEEEEEecCCcEEEEE
Q psy12614 543 TAMAIHPT--LSTLVTVYSDHRIVEFD 567 (708)
Q Consensus 543 ~~l~~s~d--~~~l~~~~~dg~i~vwd 567 (708)
++++|+++ +.+|++++.||.|+||+
T Consensus 411 ~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 411 NSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred eeEeeeccCCceEEEEEcCCceEEEeC
Confidence 99999988 77999999999999995
No 85
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.9e-34 Score=289.26 Aligned_cols=280 Identities=15% Similarity=0.146 Sum_probs=239.9
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC--eEEEEEecCCCCCcEEEEEEe--CC-EEEEEcCCCc
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETP--HVDRVFIGDPLSNSIECLTWF--ND-RLFSGGLQGF 92 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~--~~~~~~~~h~~~~~v~~l~~~--~~-~l~s~~~d~~ 92 (708)
...+..+|.+.|++++|+|++++||+|+.||.|+|||+.++. .....+.+|. ..|.+++|+ ++ +|++++.||.
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~~dg~ 80 (342)
T 1yfq_A 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYK--HPLLCCNFIDNTDLQIYVGTVQGE 80 (342)
T ss_dssp EEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECS--SCEEEEEEEESSSEEEEEEETTSC
T ss_pred ceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecC--CceEEEEECCCCCcEEEEEcCCCe
Confidence 344567999999999999999999999999999999999877 1123566888 999999999 88 8999999999
Q ss_pred EEEEEC-CCCeEeEEEee--cCCceEEEEEecCCCEEEEEeCCCcEEEEEccC---------CcEEEEEecccccccEEE
Q psy12614 93 VNEYDM-RRLNIKSSTAV--TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD---------EGLLYEKLLDRQQGRILC 160 (708)
Q Consensus 93 i~vwd~-~~~~~~~~~~~--~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~---------~~~~~~~~~~~~~~~v~~ 160 (708)
|++||+ .+++. ..+.+ |...|.+++|+| +++|++++.|+.|++||+.+ ++.. ..+. |...|.+
T Consensus 81 i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~-~~~~v~~ 155 (342)
T 1yfq_A 81 ILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS--NNTK-VKNKIFT 155 (342)
T ss_dssp EEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCS--SSSS-SCCCEEE
T ss_pred EEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCee--eEEe-eCCceEE
Confidence 999999 87755 67778 999999999999 99999999999999999987 5543 3444 8899999
Q ss_pred EEECCCCCEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEcc-CCE-EEEEcCCCcEEEEeCCCC--
Q psy12614 161 TAWHSSGDYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCA-DFT-IITGDSGGFVRFWDGKTG-- 234 (708)
Q Consensus 161 ~~~s~d~~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~dg~i~~wd~~~~-- 234 (708)
++|+|++ +++++.+ .|++||+.+ +......... .+...+.+++|+| ++. +++++.+|.|++|+++..
T Consensus 156 ~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~ 228 (342)
T 1yfq_A 156 MDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEES-----GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGD 228 (342)
T ss_dssp EEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEEC-----SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCC
T ss_pred EEecCCc--EEEEeCCCeEEEEECCccccccceeeec-----CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCc
Confidence 9999988 8888888 999999998 6543222222 3377899999999 885 899999999999999887
Q ss_pred ----eeEEEeecccc---------CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc
Q psy12614 235 ----VQWSDVKTHKK---------DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH 301 (708)
Q Consensus 235 ----~~~~~~~~~~~---------~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 301 (708)
+....+..|.. .|.+++|+|++++|++++.||.|++||+.+ ++ ....+..|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~--------~~--------~~~~~~~~ 292 (342)
T 1yfq_A 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT--------RK--------KIKNFAKF 292 (342)
T ss_dssp STTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT--------TE--------EEEECCCC
T ss_pred ccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc--------Hh--------Hhhhhhcc
Confidence 77778887765 999999999999999999999999999998 65 56778888
Q ss_pred -ccceEEEEEe-CCEEEEEcCCCe-EEEEe
Q psy12614 302 -EGDVKSLALH-GNRLYSGGLDSY-LSLSY 328 (708)
Q Consensus 302 -~~~v~~l~~~-~~~l~s~~~d~~-i~iw~ 328 (708)
...|.+++ . +.+|++++.||. .+.+.
T Consensus 293 h~~~v~~~~-~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 293 NEDSVVKIA-CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp SSSEEEEEE-ECSSEEEEEEECTHHHHCSS
T ss_pred cCCCceEec-CCCCeEEEEecCCccccccc
Confidence 99999999 6 999999999998 54444
No 86
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.7e-34 Score=294.10 Aligned_cols=331 Identities=16% Similarity=0.211 Sum_probs=241.2
Q ss_pred eeeeccCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCeEEEEE------------ecCCCCCcEEEEEEe---C
Q psy12614 18 NIKFYAPEPKVINCIACEP-KSSRLAVSRADQSIEIWDISETPHVDRVF------------IGDPLSNSIECLTWF---N 81 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~~~~~~~~~------------~~h~~~~~v~~l~~~---~ 81 (708)
..+++.+|.+.|++++|+| ++++||+|+.||.|+|||+.++....... .+|. ..|.+++|+ +
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~ 112 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHR--YSVETVQWYPHDT 112 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCS--SCEEEEEECTTCT
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCC--CcEEEEEEccCCC
Confidence 3567889999999999999 99999999999999999999876543111 2588 999999998 6
Q ss_pred CEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecC---CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccE
Q psy12614 82 DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK---KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRI 158 (708)
Q Consensus 82 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~---~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 158 (708)
.+|++++.||.|++||+.+++....+. +...+.+++++|. +.++++++.|+.|++||+.+++.. ..+..|...|
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~--~~~~~~~~~v 189 (408)
T 4a11_B 113 GMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS--HILQGHRQEI 189 (408)
T ss_dssp TCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC--EEECCCCSCE
T ss_pred cEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee--eeecCCCCcE
Confidence 789999999999999999999888876 6788999999985 449999999999999999988876 6788899999
Q ss_pred EEEEECCCCC-EEEEecCC-eEEEEEcCCCc-eEEEEEeccc--------CCCCCceeEEEEEEccCCE-EEEEcCCCcE
Q psy12614 159 LCTAWHSSGD-YLVTGCAA-AVRVWDIHKGH-AIHKMSLDKS--------SKFSKNTAVWCVAFCADFT-IITGDSGGFV 226 (708)
Q Consensus 159 ~~~~~s~d~~-~l~~~~~d-~i~iwd~~~~~-~~~~~~~~~~--------~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i 226 (708)
.+++|+|+++ .|++++.| .|++||++++. .+..+..... ....+...|.+++|+|+++ +++++.||.|
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeE
Confidence 9999999998 58899999 99999998776 3333311100 0003478899999999995 9999999999
Q ss_pred EEEeCCCCeeEEEeecc-----ccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc
Q psy12614 227 RFWDGKTGVQWSDVKTH-----KKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH 301 (708)
Q Consensus 227 ~~wd~~~~~~~~~~~~~-----~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 301 (708)
++||+.+++....+..+ ...+........+..+++++.++.|++||+.+ ++ ....+.+|
T Consensus 270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~--------~~--------~~~~~~~~ 333 (408)
T 4a11_B 270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYS--------GE--------QITMLKGH 333 (408)
T ss_dssp EEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTT--------CC--------EEEEECCC
T ss_pred EEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcC--------Cc--------ceeeeccC
Confidence 99999988765544322 12222233334456677778899999999998 76 67888899
Q ss_pred ccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEE--EEEcCCeEEEEEecC
Q psy12614 302 EGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHV--LLQYTSHLELWSLGS 371 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l--~~~~~~~i~i~~~~~ 371 (708)
...|.+++|+ +.+|++++.||.|++|++.+....... ........+.+..... ....++.+++|+...
T Consensus 334 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 334 YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDD--DETTTKSQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------------------------------
T ss_pred CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCC--CceEeccccccccceeecccCccCceeecCCcc
Confidence 9999999999 889999999999999999887633222 1111222233332222 235778899997653
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.3e-33 Score=290.96 Aligned_cols=276 Identities=20% Similarity=0.273 Sum_probs=236.1
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEe--cCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEe
Q psy12614 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFI--GDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIK 104 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~--~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~ 104 (708)
++.|+||++ ++||+|. |++|+|||..+++... .+. +|. ..|++|+|+ |++|++|+.||+|++||+++++++
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~-~~~~~~~~--~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQ-LLQMEQPG--EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEE-EEECCSTT--CCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEE-EEEecCCC--CcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence 456999976 5888886 8899999999998775 554 566 889999999 999999999999999999999999
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEc
Q psy12614 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDI 183 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~ 183 (708)
..+.+|...+.+++++ +..|++|+.|+.+++||........ ..+.+|...+..+.|+|+++++++++.| .+++|+.
T Consensus 183 ~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~-~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~ 259 (420)
T 4gga_A 183 RNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHV-ATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 259 (420)
T ss_dssp EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEE-EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred EEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceee-EEecccccceeeeeecCCCCeeeeeeccccceEEee
Confidence 9999999999988775 6799999999999999998755432 6788999999999999999999999999 9999999
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEEEccCCE--EE--EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEE
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--II--TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYL 259 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~--~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 259 (708)
.+++.......... .+...|.+++|+|++. ++ +|+.|+.|++||+.+++....+..+ ..+.++.|+|+++.+
T Consensus 260 ~~~~~~~~~~~~~~---~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~l 335 (420)
T 4gga_A 260 APGEGGWVPLQTFT---QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKEL 335 (420)
T ss_dssp SCCSSCSCCSEEEC---CCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEE
T ss_pred ccccccceeeeeec---ccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeE
Confidence 87753221111111 3478899999999773 44 3567999999999999999888754 678999999999999
Q ss_pred EEEe--cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCC
Q psy12614 260 YCAG--VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 260 ~~~~--~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~ 332 (708)
++++ .|+.|++||+.+ ++ ....+.+|.+.|.+++|+ +.+|++++.|++|++||+.+.
T Consensus 336 v~~sg~~d~~I~iwd~~~--------~~--------~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 336 ISGHGFAQNQLVIWKYPT--------MA--------KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEECTTTCCEEEEETTT--------CC--------EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred EEEEecCCCEEEEEECCC--------Cc--------EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 8765 689999999998 76 778899999999999999 889999999999999998654
No 88
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.7e-34 Score=289.89 Aligned_cols=280 Identities=14% Similarity=0.119 Sum_probs=230.3
Q ss_pred EEEecCCCCCcEEEEEEe--C-CEEEEEcCCCcEEEEECCCCeEeEEEe--ecCCceEEEEEec-CCCEEEEEeCCCcEE
Q psy12614 63 RVFIGDPLSNSIECLTWF--N-DRLFSGGLQGFVNEYDMRRLNIKSSTA--VTSGTCWCLSVHK-KKRLLAAGTEQGHIN 136 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~-~~l~s~~~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~s~-~~~~la~~~~d~~i~ 136 (708)
..+.+|. ..|.+++|+ + ++|++++.||.|++||+.+++....+. +|.+.|.+++|+| ++++|++++.|+.|+
T Consensus 67 ~~~~~h~--~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 67 RTASPFD--RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATT 144 (383)
T ss_dssp EEECCCS--SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEE
T ss_pred EeccCCC--CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEE
Confidence 4889999 999999999 5 799999999999999999988777765 6999999999999 789999999999999
Q ss_pred EEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC
Q psy12614 137 LFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF 215 (708)
Q Consensus 137 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 215 (708)
+||+.+...........|...|.+++|+|++++|++++.| .|++||+ +++.+..+.. |...|.+++|+|++
T Consensus 145 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~-------h~~~v~~~~~~~~~ 216 (383)
T 3ei3_B 145 LRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKL-------HKAKVTHAEFNPRC 216 (383)
T ss_dssp EEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEEC-------SSSCEEEEEECSSC
T ss_pred EEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEecc-------CCCcEEEEEECCCC
Confidence 9999976554333334456889999999999999999999 9999999 5777777653 38899999999998
Q ss_pred E--EEEEcCCCcEEEEeCCC----CeeEEEeeccccCeEEEEEeC-CCCEEEEEecCCeEEEEEccCCcccccCCCCCCC
Q psy12614 216 T--IITGDSGGFVRFWDGKT----GVQWSDVKTHKKDILALTVSE-DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQG 288 (708)
Q Consensus 216 ~--l~~~~~dg~i~~wd~~~----~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~ 288 (708)
. +++++.|+.|++||+++ +..+..+ +|...|.+++|+| ++++|++++.|+.|++||+.+ ++
T Consensus 217 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~--------~~--- 284 (383)
T 3ei3_B 217 DWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD--------WS--- 284 (383)
T ss_dssp TTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB--------TT---
T ss_pred CCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC--------Cc---
Confidence 4 88999999999999987 5666666 6999999999999 999999999999999999988 43
Q ss_pred CcceEEeEEEecc-------c----------cceEEEEEe--CCEEEEEcCCCeEEEEeCCCCce-eecCcc--CCCCce
Q psy12614 289 SSVWVRSVNRVIH-------E----------GDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTL-VKYPCT--LAQSTP 346 (708)
Q Consensus 289 ~~~~~~~~~~~~~-------~----------~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~-~~~~~~--~~~~~~ 346 (708)
....+..| . ..+..++++ +.+ +++.|+.|++||+.+... ..+..+ ......
T Consensus 285 -----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~ 357 (383)
T 3ei3_B 285 -----KPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISL 357 (383)
T ss_dssp -----SCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCE
T ss_pred -----cccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEE
Confidence 11222222 1 334445555 333 778999999999987763 444432 334456
Q ss_pred EEEEcCCcEEEEEcCCeEEEEEecC
Q psy12614 347 VSLAKDIQHVLLQYTSHLELWSLGS 371 (708)
Q Consensus 347 ~~~s~~~~~l~~~~~~~i~i~~~~~ 371 (708)
++|+|++++|+++.++.|++|++.+
T Consensus 358 ~~~s~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 358 NKFSPTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp EEECTTSSEEEEEETTEEEEEECC-
T ss_pred EEEecCccEEEEecCCcEEEEecCC
Confidence 7999999999998899999999875
No 89
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.2e-35 Score=296.49 Aligned_cols=347 Identities=11% Similarity=0.088 Sum_probs=229.8
Q ss_pred EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcC
Q psy12614 106 STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIH 184 (708)
Q Consensus 106 ~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~ 184 (708)
.+..+.+.|++++|+|++++||+++.|+.|++||+.++.......+.+|...|.+++|+|++++|++++.| .|++||+.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 34456789999999999999999999999999999988433337888999999999999999999999999 99999999
Q ss_pred CCc---eEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCe---eEEEeec-cccCeEEEEEeCCC
Q psy12614 185 KGH---AIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGV---QWSDVKT-HKKDILALTVSEDE 256 (708)
Q Consensus 185 ~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~---~~~~~~~-~~~~i~~~~~s~~~ 256 (708)
+++ ....+. .+...|.+++|+|+++ +++++.|+.|++||+++++ ....+.. |...|.+++|+|++
T Consensus 86 ~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 158 (377)
T 3dwl_C 86 PDGTWKQTLVLL-------RLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN 158 (377)
T ss_dssp ---CCCCEEECC-------CCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTS
T ss_pred CCCceeeeeEec-------ccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC
Confidence 877 333332 4488999999999995 9999999999999999887 3677777 99999999999999
Q ss_pred CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceee
Q psy12614 257 NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVK 336 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 336 (708)
++|++++.|+.|++||+.. ++. ..... .. .|..
T Consensus 159 ~~l~~~~~d~~i~iwd~~~--------~~~--------~~~~~---~~---------------------~~~~------- 191 (377)
T 3dwl_C 159 VLLAAGCADRKAYVLSAYV--------RDV--------DAKPE---AS---------------------VWGS------- 191 (377)
T ss_dssp SEEEEEESSSCEEEEEECC--------SSC--------C-CCC---SC---------------------SSCS-------
T ss_pred CEEEEEeCCCEEEEEEEEe--------ccc--------CCCcc---cc---------------------cccc-------
Confidence 9999999999999999976 320 00000 00 0000
Q ss_pred cCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc
Q psy12614 337 YPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK 416 (708)
Q Consensus 337 ~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 416 (708)
.. ....+.... .|...|.+++|+|+|+
T Consensus 192 ---------------------------------~~-------------------~~~~~~~~~-~~~~~v~~~~~sp~~~ 218 (377)
T 3dwl_C 192 ---------------------------------RL-------------------PFNTVCAEY-PSGGWVHAVGFSPSGN 218 (377)
T ss_dssp ---------------------------------CC-------------------CEEEEEECC-CCSSSEEEEEECTTSS
T ss_pred ---------------------------------cc-------------------chhhhhhcc-cCCceEEEEEECCCCC
Confidence 00 001222222 6778899999999999
Q ss_pred EEEEE-cCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCC
Q psy12614 417 YVAYS-TESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYK 494 (708)
Q Consensus 417 ~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~ 494 (708)
+|+++ .|+.|++||+..... ....+..+..|.. .|++++|+|++++|++++.++. +|.......+....+....
T Consensus 219 ~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T 3dwl_C 219 ALAYAGHDSSVTIAYPSAPEQ--PPRALITVKLSQL--PLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRDLDAGT 294 (377)
T ss_dssp CEEEEETTTEEC-CEECSTTS--CEEECCCEECSSS--CEEEEEEEETTEEEEEESSSSEEEECCCC---CCSBCCCSCC
T ss_pred EEEEEeCCCcEEEEECCCCCC--cceeeEeecCCCC--ceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEEEeeecccc
Confidence 99985 599999999997443 1222223555644 7888999999999999987777 7776644322222332211
Q ss_pred CCcc----------CcceEEEEECCCCcEEEEEecCCeEEEEECCceeeecCCCCCCceEEEEcCCC-C---EEEEEecC
Q psy12614 495 SNLM----------SDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHASLPRYRKPSTAMAIHPTL-S---TLVTVYSD 560 (708)
Q Consensus 495 ~~~~----------~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~v~~l~~s~d~-~---~l~~~~~d 560 (708)
.... ......+.|++....+......+... ........|...|+++++.++. . .|++++.|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~D 369 (377)
T 3dwl_C 295 SKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQ-----SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTD 369 (377)
T ss_dssp CCCCBSSSSSBCCCCCC------------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETT
T ss_pred cccccccccccccccccccccccccccccccchhhccccc-----cccccCccccceeEEEeccCCCCCceEEEEeecCC
Confidence 1100 01144444544433333222222211 1122456799999999976543 3 69999999
Q ss_pred CcEEEEEc
Q psy12614 561 HRIVEFDL 568 (708)
Q Consensus 561 g~i~vwd~ 568 (708)
|.|++||+
T Consensus 370 g~i~iWdl 377 (377)
T 3dwl_C 370 GRVVLWTL 377 (377)
T ss_dssp SEEEEECC
T ss_pred CcEEEecC
Confidence 99999985
No 90
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2e-33 Score=282.85 Aligned_cols=250 Identities=15% Similarity=0.220 Sum_probs=216.6
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC---eEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCC
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETP---HVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQG 91 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~---~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~ 91 (708)
.+++.+|.+.|++++|+|++++||+|+.||.|+|||+.++. .....+.+|. ..|.+++|+ +++|++++.||
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHD--SSIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCS--SCEEEEEECCGGGCSEEEEEETTS
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCC--CcEEEEEEcCCCCCCEEEEEcCCC
Confidence 45788999999999999999999999999999999999764 2334788999 999999998 68999999999
Q ss_pred cEEEEECCCC---------eEeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEEE-------E----
Q psy12614 92 FVNEYDMRRL---------NIKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLYE-------K---- 149 (708)
Q Consensus 92 ~i~vwd~~~~---------~~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~-------~---- 149 (708)
.|++||+.++ +++..+..|.+.|.+++|+|+ +++|++++.|+.|++||+.+++.... .
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc
Confidence 9999999987 668888899999999999999 99999999999999999987764210 0
Q ss_pred ecccccccEEEEEECCC---CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC----E-EEEE
Q psy12614 150 LLDRQQGRILCTAWHSS---GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF----T-IITG 220 (708)
Q Consensus 150 ~~~~~~~~v~~~~~s~d---~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~-l~~~ 220 (708)
....|...+.+++|+|+ +.++++++.+ .+.+|+...++........ .|...|.+++|+|++ . ++++
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP-----GHKSLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC-----CCCSCEEEEEECCCSSCSSEEEEEE
T ss_pred ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC-----CCCcceeEEEECCCCCCcceEEEEE
Confidence 11257788999999997 8999999999 8888887777653333332 448899999999997 5 8999
Q ss_pred cCCCcEEEEeCCCC----------------------------------------------eeEEEeeccccCeEEEEEeC
Q psy12614 221 DSGGFVRFWDGKTG----------------------------------------------VQWSDVKTHKKDILALTVSE 254 (708)
Q Consensus 221 ~~dg~i~~wd~~~~----------------------------------------------~~~~~~~~~~~~i~~~~~s~ 254 (708)
+.||.|++||++++ +.+..+.+|...|.+++|+|
T Consensus 237 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 316 (351)
T 3f3f_A 237 CKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL 316 (351)
T ss_dssp ETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECS
T ss_pred cCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC
Confidence 99999999999765 56777888999999999999
Q ss_pred CCCEEEEEecCCeEEEEEccC
Q psy12614 255 DENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 255 ~~~~l~~~~~dg~i~iw~~~~ 275 (708)
++++|++++.||.|++|++.+
T Consensus 317 ~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 317 TGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp SSCCEEEEETTSCEEEEEECT
T ss_pred CCCEEEEecCCCcEEEEecCc
Confidence 999999999999999999998
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=284.99 Aligned_cols=316 Identities=15% Similarity=0.199 Sum_probs=244.0
Q ss_pred CCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcC---CCcEEEEECCCCeEeEEEe-ecCCceEEEEEecC---CCEE
Q psy12614 57 ETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGL---QGFVNEYDMRRLNIKSSTA-VTSGTCWCLSVHKK---KRLL 126 (708)
Q Consensus 57 ~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~---d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~s~~---~~~l 126 (708)
..+.+...+.+|. ..|.+++|+ +..+ ++++. |+.|++||+.+++...... +|...|.+++|+|+ +++|
T Consensus 6 ~~~~~~~~~~~h~--~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l 83 (357)
T 3i2n_A 6 KPQIIAHIQKGFN--YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYL 83 (357)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCE
T ss_pred hhHHhhhhccCCC--CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceE
Confidence 4455666788999 999999999 5455 56665 9999999999988765543 79999999999999 6999
Q ss_pred EEEeCCCcEEEEEccCCc-EEEEEecccccccEEEEE------ECCCCCEEEEecCC-eEEEEEcCCCc-eEEEEEeccc
Q psy12614 127 AAGTEQGHINLFQISDEG-LLYEKLLDRQQGRILCTA------WHSSGDYLVTGCAA-AVRVWDIHKGH-AIHKMSLDKS 197 (708)
Q Consensus 127 a~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~------~s~d~~~l~~~~~d-~i~iwd~~~~~-~~~~~~~~~~ 197 (708)
++++.||.|++||+.+++ .. ..+.+|...|.+++ |+|++++|++++.| .|++||+.+++ .+..+.....
T Consensus 84 ~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 161 (357)
T 3i2n_A 84 ATGDFGGNLHIWNLEAPEMPV--YSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQG 161 (357)
T ss_dssp EEEETTSCEEEECTTSCSSCS--EEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTT
T ss_pred EEecCCCeEEEEeCCCCCccE--EEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCC
Confidence 999999999999999887 54 67889999999995 57899999999999 99999999887 6666654321
Q ss_pred CCCCCceeEEEEE----EccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeC---CCCEEEEEecCCeEE
Q psy12614 198 SKFSKNTAVWCVA----FCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE---DENYLYCAGVDPTVV 269 (708)
Q Consensus 198 ~~~~~~~~v~~~~----~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~dg~i~ 269 (708)
.. ...+.+++ |+|++. +++++.||.|++||+++++.... ..|...|.+++|+| ++++|++++.||.|+
T Consensus 162 ~~---~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 237 (357)
T 3i2n_A 162 EN---KRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFH 237 (357)
T ss_dssp SC---CCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEE
T ss_pred CC---CCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEE
Confidence 11 44788888 678885 88999999999999999887554 55889999999999 999999999999999
Q ss_pred EEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC-EEEEEcCCCeEEEEeCCCCceeecCccCCCCce
Q psy12614 270 CFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN-RLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTP 346 (708)
Q Consensus 270 iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 346 (708)
+||+.+ ++ .........+.+|...|.+++|+ +. ++++++.||.|++||+.........
T Consensus 238 i~d~~~--------~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------- 298 (357)
T 3i2n_A 238 VFDMRT--------QH---PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKK-------- 298 (357)
T ss_dssp EEEEEE--------EE---TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--C--------
T ss_pred EEeCcC--------CC---cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccc--------
Confidence 999987 32 01111223456899999999999 44 7999999999999998654322111
Q ss_pred EEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEE-EE-cCC
Q psy12614 347 VSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVA-YS-TES 424 (708)
Q Consensus 347 ~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~-~~-~d~ 424 (708)
.+++... ..............|...|.+++|+|+|++|+ ++ .|+
T Consensus 299 ---~~~g~~~-------------------------------~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~ 344 (357)
T 3i2n_A 299 ---DSEGIEM-------------------------------GVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQ 344 (357)
T ss_dssp ---CTTSCCC-------------------------------CCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred ---cCCCCcc-------------------------------ccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCC
Confidence 0000000 00011234455567889999999999999998 54 599
Q ss_pred ceEEEEEEe
Q psy12614 425 CVRLHSLDL 433 (708)
Q Consensus 425 ~i~i~~~~~ 433 (708)
.|++|++..
T Consensus 345 ~i~iw~~~~ 353 (357)
T 3i2n_A 345 TVRVLIVTK 353 (357)
T ss_dssp EEEEEEECC
T ss_pred cEEEEECCC
Confidence 999999975
No 92
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.7e-34 Score=298.77 Aligned_cols=293 Identities=14% Similarity=0.133 Sum_probs=230.9
Q ss_pred eEeEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC-CCCEEEEecCC-eE
Q psy12614 102 NIKSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAA-AV 178 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d-~i 178 (708)
+......+|...|++++|+| ++++||+|+.||.|+|||+.+++......+.+|.+.|.+++|+| ++++|++++.| +|
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 34456678999999999999 56799999999999999998876554467789999999999998 68999999999 99
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCC
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDEN 257 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~ 257 (708)
++||++++... .+...+ .....+.+++|+|++. +++|+.||.|++||++ ++.+..+.+|...|.+++|+|+++
T Consensus 190 ~iwd~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~ 263 (435)
T 4e54_B 190 RLQDFKGNILR-VFASSD----TINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCD 263 (435)
T ss_dssp EEEETTSCEEE-EEECCS----SCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCS
T ss_pred EEeeccCCcee-EEeccC----CCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCc
Confidence 99999765443 333222 3356688999999995 8899999999999986 566778889999999999999985
Q ss_pred -EEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCce
Q psy12614 258 -YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTL 334 (708)
Q Consensus 258 -~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~ 334 (708)
+|++++.|+.|++||+.. ++. .. ......+|...|.+++|+ +.+|++++.|+.|++||+.+...
T Consensus 264 ~~~~s~s~d~~v~iwd~~~--------~~~--~~---~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 264 WFLATASVDQTVKIWDLRQ--------VRG--KA---SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp SEEEEEETTSBCCEEETTT--------CCS--SS---CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred eEEEEecCcceeeEEeccc--------ccc--cc---eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence 788999999999999987 320 00 122345789999999999 89999999999999999987652
Q ss_pred -eecCccC------CCCceEEEEcCCcEEEEE-------------cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceE
Q psy12614 335 -VKYPCTL------AQSTPVSLAKDIQHVLLQ-------------YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRL 394 (708)
Q Consensus 335 -~~~~~~~------~~~~~~~~s~~~~~l~~~-------------~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (708)
..+..+. .......++|++.+++++ .++.|++||..+++ .
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~--------------------~ 390 (435)
T 4e54_B 331 PLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK--------------------M 390 (435)
T ss_dssp EEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC--------------------E
T ss_pred ceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc--------------------E
Confidence 2221111 112235666766666654 23569999998876 5
Q ss_pred EEEEEecCCCceEEE-EeCCCCcEEEEEcCCceEEEEEEe
Q psy12614 395 IVKMSAVNNATIRCS-VVSNDGKYVAYSTESCVRLHSLDL 433 (708)
Q Consensus 395 ~~~~~~~~~~~i~~~-~~s~~g~~l~~~~d~~i~i~~~~~ 433 (708)
+..+..+|...|.++ +|+|+|++|++|.|+.|+||+++.
T Consensus 391 ~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~ 430 (435)
T 4e54_B 391 MCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQE 430 (435)
T ss_dssp EEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC-
T ss_pred EEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCc
Confidence 555666788888887 699999999999999999999886
No 93
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-35 Score=298.10 Aligned_cols=315 Identities=11% Similarity=0.072 Sum_probs=239.1
Q ss_pred CCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEE
Q psy12614 70 LSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLY 147 (708)
Q Consensus 70 ~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~ 147 (708)
+...|.+++|+ |+++|+++.|++|+ |.+.++.+ .+|...|++++|+|+| .++.+.+|+.+....
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~~-- 79 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NCNSKNLFHVKEFPLE-------FENKLDFELAQQNGL-- 79 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SSBGGGTEEEEEECCC-------CCCTTTTSCCCSSCS--
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--ccccccee---cCCCccEEEEEECCCC-------CcceEEEEeCCCceE--
Confidence 34889999999 99999999999999 75555444 7999999999999999 566666665443332
Q ss_pred EEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCc
Q psy12614 148 EKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGF 225 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~ 225 (708)
..+ .|...|.+++|||||++||+++.| .|++||... .+..+. ++. . -....+.+++|+|||+ +++|+.||+
T Consensus 80 -~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~-~-~~~~sv~svafSPDG~~LAsgs~DGt 152 (588)
T 2j04_A 80 -LNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKG-N-LSSRTYHCFEWNPIESSIVVGNEDGE 152 (588)
T ss_dssp -STT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSS-C-STTTCEEEEEECSSSSCEEEEETTSE
T ss_pred -eec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCC-c-cccccEEEEEEcCCCCEEEEEcCCCE
Confidence 222 458899999999999999999999 999999544 444433 210 0 0123699999999997 999999999
Q ss_pred EEEEeCCCCe-------eEEEe----eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEE
Q psy12614 226 VRFWDGKTGV-------QWSDV----KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVR 294 (708)
Q Consensus 226 i~~wd~~~~~-------~~~~~----~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~ 294 (708)
|++||+.++. .+.++ .+|...|.+++|+||| +++++.|+.+++|++.. +. .. ..
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~--------~~----~~-~~ 217 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSA--------SS----HQ-PV 217 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCS--------SS----SC-CC
T ss_pred EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCC--------Cc----cc-cc
Confidence 9999999875 35666 5677899999999999 88899999999999987 42 00 01
Q ss_pred eEEE-eccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCC
Q psy12614 295 SVNR-VIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQ 373 (708)
Q Consensus 295 ~~~~-~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~ 373 (708)
...+ .+|...|.+++|+++.|++++ ++.|++|++.+..
T Consensus 218 ~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~---------------------------------------- 256 (588)
T 2j04_A 218 SRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYS---------------------------------------- 256 (588)
T ss_dssp EEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTE----------------------------------------
T ss_pred eeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCe----------------------------------------
Confidence 1234 378889999999988888887 6899888876543
Q ss_pred CCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEe--CCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCccc
Q psy12614 374 STDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVV--SNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPL 450 (708)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~ 450 (708)
......+|...+..++| +||++.++++. +|+ ++|..+.
T Consensus 257 ---------------------~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~----------------- 297 (588)
T 2j04_A 257 ---------------------ISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE----------------- 297 (588)
T ss_dssp ---------------------EEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSS-----------------
T ss_pred ---------------------EEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc-----------------
Confidence 22233367888899999 99998888866 888 9987641
Q ss_pred ccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe
Q psy12614 451 FKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD 518 (708)
Q Consensus 451 ~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 518 (708)
++|+||+..+++. |+. +|+...+. +..+ .+ ...|.+++|||||+.+|+++
T Consensus 298 -------~~~spd~~l~a~~--d~~v~lW~~~g~~---l~~~---~~---~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 298 -------LHVTADNIIAPYL--EKKFKKWSTIWNE---FNNY---ET---TLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp -------EEEECCCSSHHHH--HHHHHHTTTTTTS---SSSS---CC---EEEEEEEEECTTSSEEEEEE
T ss_pred -------EEECCCceEEEEc--CCEEEEEECCCCc---eeee---cc---ceEEEEEEECCCCCEEEEEE
Confidence 5688999888764 555 77654441 1122 11 45688999999999999885
No 94
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.3e-33 Score=284.30 Aligned_cols=301 Identities=12% Similarity=0.096 Sum_probs=238.6
Q ss_pred EEEecCCCCCcEEEEEEe------CCEEEEEcCCCcEEEEECCCCeEeEEEee-----cCCceEEEEEecC----CCEEE
Q psy12614 63 RVFIGDPLSNSIECLTWF------NDRLFSGGLQGFVNEYDMRRLNIKSSTAV-----TSGTCWCLSVHKK----KRLLA 127 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~------~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~s~~----~~~la 127 (708)
....+|. .+|.+++|+ ...+++++.++.|++||+.+++.+..+.. |...|.+++|+|+ +++|+
T Consensus 12 ~~~~~h~--~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~ 89 (366)
T 3k26_A 12 SLKEDHN--QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLA 89 (366)
T ss_dssp EEECTTC--SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEE
T ss_pred EeecCCC--CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEE
Confidence 4667899 999999999 34677777788999999998887777764 4578999999999 67999
Q ss_pred EEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC-CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCcee
Q psy12614 128 AGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTA 205 (708)
Q Consensus 128 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 205 (708)
+|+.||.|++||+.+++.. ..+.+|...|.+++|+| ++++|++++.| .|++||+.+++.+..+.... .+...
T Consensus 90 ~~~~dg~i~v~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~ 163 (366)
T 3k26_A 90 VAGSRGIIRIINPITMQCI--KHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVE----GHRDE 163 (366)
T ss_dssp EEETTCEEEEECTTTCCEE--EEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTT----SCSSC
T ss_pred EecCCCEEEEEEchhceEe--eeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccc----cccCc
Confidence 9999999999999999887 67888999999999999 99999999999 99999999998887774211 34889
Q ss_pred EEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee----------------------------ccccCeEEEEEeCCC
Q psy12614 206 VWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK----------------------------THKKDILALTVSEDE 256 (708)
Q Consensus 206 v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~----------------------------~~~~~i~~~~~s~~~ 256 (708)
|.+++|+|++. +++++.||.|++||+++++....+. .|...|.+++|+ +
T Consensus 164 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 241 (366)
T 3k26_A 164 VLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G 241 (366)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T
T ss_pred eeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C
Confidence 99999999995 9999999999999999876544433 389999999999 6
Q ss_pred CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe----CCEEEEEcCCCeEEEEeCCCC
Q psy12614 257 NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH----GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~l~s~~~d~~i~iw~~~~~ 332 (708)
++|++++.|+.|++||+.+.......... ..........+..|...|.+++|+ +.+|++++.||.|++||+.+.
T Consensus 242 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 242 DLILSKSCENAIVCWKPGKMEDDIDKIKP--SESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp TEEEEECSSSEEEEEEESSTTCCGGGCCT--TCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSS
T ss_pred CEEEEEecCCEEEEEeCCCcccccccccc--CCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCC
Confidence 79999999999999999872111100000 112233466677788888888877 578888888888888887654
Q ss_pred ceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecC--CCceEEEE
Q psy12614 333 TLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVN--NATIRCSV 410 (708)
Q Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~ 410 (708)
.... ........+ ...|.+++
T Consensus 320 ~~~~---------------------------------------------------------~~~~~~~~~~~~~~v~~~~ 342 (366)
T 3k26_A 320 DPHK---------------------------------------------------------AKCTTLTHHKCGAAIRQTS 342 (366)
T ss_dssp SGGG---------------------------------------------------------CEEEEECCTTCCSCEEEEE
T ss_pred CCcc---------------------------------------------------------ccceEEcccccCCceEEEE
Confidence 3111 111222234 68899999
Q ss_pred eCCCCcEEEEE-cCCceEEEEEE
Q psy12614 411 VSNDGKYVAYS-TESCVRLHSLD 432 (708)
Q Consensus 411 ~s~~g~~l~~~-~d~~i~i~~~~ 432 (708)
|+|++++|+++ .||.|++||+.
T Consensus 343 ~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 343 FSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC-
T ss_pred eCCCCCeEEEEeCCCEEEEEEec
Confidence 99999999985 59999999975
No 95
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.1e-33 Score=276.24 Aligned_cols=245 Identities=12% Similarity=0.185 Sum_probs=208.1
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC--CeEeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEE
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR--LNIKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINL 137 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~--~~~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~i 137 (708)
.+.+|. ..|.+++|+ +++|++++.|++|++||+++ .+++..+.+|.+.|++++|+|+ +++||+|+.|++|++
T Consensus 4 ~~~~h~--~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 4 IANAHN--EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp ECCSCS--SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eccCCc--CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 678999 999999999 99999999999999999975 4678899999999999999864 899999999999999
Q ss_pred EEccCCcEEEEEecccccccEEEEEECCC--CCEEEEecCC-eEEEEEcCCCceE--EEEEecccCCCCCceeEEEEEEc
Q psy12614 138 FQISDEGLLYEKLLDRQQGRILCTAWHSS--GDYLVTGCAA-AVRVWDIHKGHAI--HKMSLDKSSKFSKNTAVWCVAFC 212 (708)
Q Consensus 138 wd~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d-~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~ 212 (708)
||+.+++......+.+|...|.+++|+|+ +.+|++++.| .|++||+.++... ..+. .|...|.+++|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~-------~h~~~v~~~~~~ 154 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID-------AHAIGVNSASWA 154 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE-------CCSSCEEEEEEC
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee-------cccCccceEeec
Confidence 99998753222567789999999999998 8999999999 9999999876422 2222 347889999999
Q ss_pred cC-------------C-EEEEEcCCCcEEEEeCCCCe----eEEEeeccccCeEEEEEeCCC---CEEEEEecCCeEEEE
Q psy12614 213 AD-------------F-TIITGDSGGFVRFWDGKTGV----QWSDVKTHKKDILALTVSEDE---NYLYCAGVDPTVVCF 271 (708)
Q Consensus 213 ~~-------------~-~l~~~~~dg~i~~wd~~~~~----~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~i~iw 271 (708)
|+ + .+++|+.|+.|++||+++++ ....+.+|...|.+++|+|++ ++|++++.|+.|++|
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iW 234 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIW 234 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEE
Confidence 97 3 59999999999999998765 567788999999999999984 899999999999999
Q ss_pred EccCCcccccCCCCCCCCcceEEeEEE--eccccceEEEEEe--CCEEEEEcCCCeEEEEeCC
Q psy12614 272 QRTRKPQVCSTSGPEQGSSVWVRSVNR--VIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 272 ~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~ 330 (708)
|+.. +. ..+. ...+ ..|...|.+++|+ +++|++++.|+.|++|+..
T Consensus 235 d~~~--------~~----~~~~-~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 235 TQDN--------EQ----GPWK-KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EESS--------TT----SCCE-EEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EeCC--------CC----Cccc-eeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 9986 32 1111 1122 4678889999999 8999999999999999975
No 96
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=295.24 Aligned_cols=321 Identities=10% Similarity=0.130 Sum_probs=237.9
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe----------EEEEEecCCCC----------CcEEEEEEe--C
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH----------VDRVFIGDPLS----------NSIECLTWF--N 81 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~----------~~~~~~~h~~~----------~~v~~l~~~--~ 81 (708)
.|.+.|++++|+|+|++||+|+.||.|+|||+.++.. +...+.+|... ..|.+++|+ +
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 3679999999999999999999999999999998762 23478888511 569999999 4
Q ss_pred --CEEEEEcCCCcEEEEECCCCeEe---------------------------------------EE-EeecCCceEEEEE
Q psy12614 82 --DRLFSGGLQGFVNEYDMRRLNIK---------------------------------------SS-TAVTSGTCWCLSV 119 (708)
Q Consensus 82 --~~l~s~~~d~~i~vwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~ 119 (708)
..|++++.|++|++||+.++... .. ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 68999999999999998875432 12 3579999999999
Q ss_pred ecCCCEEEEEeCCCcEEEEEccCCcEEEEE------ecccccccEEEEEECCCC-CEEEEecCC-eEEEEEcCCCce---
Q psy12614 120 HKKKRLLAAGTEQGHINLFQISDEGLLYEK------LLDRQQGRILCTAWHSSG-DYLVTGCAA-AVRVWDIHKGHA--- 188 (708)
Q Consensus 120 s~~~~~la~~~~d~~i~iwd~~~~~~~~~~------~~~~~~~~v~~~~~s~d~-~~l~~~~~d-~i~iwd~~~~~~--- 188 (708)
+|++++|++| .|+.|++||+......... .+.+|...|.+++|+|++ ++|++++.| .|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 8999999999844332211 367899999999999998 999999999 999999999886
Q ss_pred -EEEEEecccCC-----CCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCC-CeeEEEeeccccC--------------
Q psy12614 189 -IHKMSLDKSSK-----FSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKT-GVQWSDVKTHKKD-------------- 246 (708)
Q Consensus 189 -~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~-~~~~~~~~~~~~~-------------- 246 (708)
...+....... ..+...|.+++|+|+|+ +++++. +.|++||+++ ++.+..+.+|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 55555331000 00012899999999996 777777 9999999997 8888888877542
Q ss_pred -eEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeE
Q psy12614 247 -ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYL 324 (708)
Q Consensus 247 -i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i 324 (708)
+..++|+|++++|++++.||.|++||+.+ ++ ...+..|.......... ...+..++....
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~--------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 405 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFDRNT--------KR---------DITLEASRENNKPRTVLKPRKVCASGKRKK- 405 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEETTT--------CC---------EEEEECCSTTCCTTCBCCCCCEECSSCCCT-
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEEcCC--------Cc---------ceeeeecccccccccccCCccccccCCccc-
Confidence 33499999999999999999999999998 64 23445554433322222 222222221100
Q ss_pred EEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEec
Q psy12614 325 SLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370 (708)
Q Consensus 325 ~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~ 370 (708)
................++++|++.+|+++..+.+.+|...
T Consensus 406 ------~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~~ 445 (447)
T 3dw8_B 406 ------DEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQDK 445 (447)
T ss_dssp ------TCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEECC
T ss_pred ------ccccccccccCCceeEEEECCCCCEEEEEecceeeeeccc
Confidence 0000001112345677999999999999988889998754
No 97
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.1e-33 Score=281.43 Aligned_cols=285 Identities=11% Similarity=0.171 Sum_probs=237.5
Q ss_pred eeeeeeccCCCCcEEEEEEcCC---CCEEEEEeCCCcEEEEeCCC-CCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC
Q psy12614 16 VHNIKFYAPEPKVINCIACEPK---SSRLAVSRADQSIEIWDISE-TPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL 89 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~---~~~la~~~~dg~v~iwd~~~-~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~ 89 (708)
...++.+.+|.+.|++++|+|+ |++||+|+.||.|+|||+.+ +..+...+.+|. ..|.+++|+ +++|++++.
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s~~~ 106 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHT--GPVLDVCWSDDGSKVFTASC 106 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECS--SCEEEEEECTTSSEEEEEET
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecccc--CCEEEEEECcCCCEEEEEcC
Confidence 3456678999999999999999 69999999999999999998 666656899999 999999999 889999999
Q ss_pred CCcEEEEECCCCeEeEEEeecCCceEEEEE--ecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC
Q psy12614 90 QGFVNEYDMRRLNIKSSTAVTSGTCWCLSV--HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG 167 (708)
Q Consensus 90 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~--s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~ 167 (708)
||.|++||+.+++.+. +..|...|.+++| +|++++|++++.|+.|++||+.+++.. ..+..+ ..+.++.+.+
T Consensus 107 dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~~~~-~~~~~~~~~~-- 180 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM--MVLQLP-ERCYCADVIY-- 180 (368)
T ss_dssp TSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCS--EEEECS-SCEEEEEEET--
T ss_pred CCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEE--EEEecC-CCceEEEecC--
Confidence 9999999999998776 5679999999999 899999999999999999999988876 444444 3567777664
Q ss_pred CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-----EEEEEcCCCcEEEEeCCCC---eeEE
Q psy12614 168 DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-----TIITGDSGGFVRFWDGKTG---VQWS 238 (708)
Q Consensus 168 ~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~l~~~~~dg~i~~wd~~~~---~~~~ 238 (708)
..+++++.+ .+.+|++............ .....+.++++.++. .+++++.||.|++||++.. ..+.
T Consensus 181 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~ 255 (368)
T 3mmy_A 181 PMAVVATAERGLIVYQLENQPSEFRRIES-----PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNF 255 (368)
T ss_dssp TEEEEEEGGGCEEEEECSSSCEEEEECCC-----SCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSE
T ss_pred CeeEEEeCCCcEEEEEeccccchhhhccc-----cccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccce
Confidence 477788888 9999999877655444332 113444555554433 1999999999999999887 5566
Q ss_pred Eeecccc------------CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE
Q psy12614 239 DVKTHKK------------DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306 (708)
Q Consensus 239 ~~~~~~~------------~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~ 306 (708)
.+.+|.. .|.+++|+|++++|++++.||.|++||+.+ ++ ....+..|...|.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~--------~~--------~~~~~~~~~~~v~ 319 (368)
T 3mmy_A 256 TFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA--------RT--------KLKTSEQLDQPIS 319 (368)
T ss_dssp EEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT--------TE--------EEEECCCCSSCEE
T ss_pred eeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC--------Cc--------EEEEecCCCCCce
Confidence 7777766 799999999999999999999999999998 65 6777889999999
Q ss_pred EEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 307 SLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 307 ~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
+++|+ +.+|++++.|+..+.|++
T Consensus 320 ~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 320 ACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp EEEECTTSSCEEEEECCCSTTCGGG
T ss_pred EEEECCCCCeEEEEecccccccccc
Confidence 99999 899999999886555543
No 98
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-32 Score=280.69 Aligned_cols=239 Identities=17% Similarity=0.285 Sum_probs=216.2
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECC-CCe
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMR-RLN 102 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~-~~~ 102 (708)
.|.+.|++++|+|++++||+|+.||.|+|||+.+++.+. .+.+|. ..|.+++|+++.|++++.||.|++||+. .+.
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~--~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 208 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLR-TMAGHQ--ARVGCLSWNRHVLSSGSRSGAIHHHDVRIANH 208 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-EECCCS--SCEEEEEEETTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEE-EecCCC--CceEEEEECCCEEEEEcCCCCEEEEecccCcc
Confidence 489999999999999999999999999999999998876 888999 9999999999999999999999999999 567
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCC-EEEEec--CC-eE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD-YLVTGC--AA-AV 178 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-~l~~~~--~d-~i 178 (708)
....+.+|.+.|.+++|+|++++|++++.|+.|++||+.+++.. ..+..|...|.+++|+|++. .+++++ .| .|
T Consensus 209 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~--~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i 286 (401)
T 4aez_A 209 QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPK--FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQI 286 (401)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEE--EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEE
T ss_pred eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCcc--EEecCCcceEEEEEECCCCCCEEEEecCCCCCEE
Confidence 78889999999999999999999999999999999999998887 67788999999999999775 555554 57 99
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEE--EcCCCcEEEEeCCCCeeEE--EeeccccCeEEEEEe
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IIT--GDSGGFVRFWDGKTGVQWS--DVKTHKKDILALTVS 253 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~--~~~dg~i~~wd~~~~~~~~--~~~~~~~~i~~~~~s 253 (708)
++||+.+++.+..+.. ...+.+++|+|++. +++ |+.||.|++||+.+++... .+.+|...|.+++|+
T Consensus 287 ~i~d~~~~~~~~~~~~--------~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s 358 (401)
T 4aez_A 287 HFWNAATGARVNTVDA--------GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALS 358 (401)
T ss_dssp EEEETTTCCEEEEEEC--------SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEEC
T ss_pred EEEECCCCCEEEEEeC--------CCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEEC
Confidence 9999999999888753 56799999999996 666 5589999999999875544 467899999999999
Q ss_pred CCCCEEEEEecCCeEEEEEccC
Q psy12614 254 EDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 254 ~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
|++++|++++.||.|++|++.+
T Consensus 359 ~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 359 PDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp TTSSEEEEECTTSEEEEEECCC
T ss_pred CCCCEEEEEeCCCcEEEEECCC
Confidence 9999999999999999999988
No 99
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.5e-33 Score=278.00 Aligned_cols=252 Identities=12% Similarity=0.167 Sum_probs=204.0
Q ss_pred EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe--EeEEEeecCCceEEEEEec--CCCEEEEEeCCCc
Q psy12614 61 VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN--IKSSTAVTSGTCWCLSVHK--KKRLLAAGTEQGH 134 (708)
Q Consensus 61 ~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~s~--~~~~la~~~~d~~ 134 (708)
+...+.+|. +.|.+++|+ +++|++++.|++|++||+.+++ ++..+.+|.+.|++++|+| ++++||+|+.|++
T Consensus 5 ~~~~~~~H~--~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 5 INTVDTSHE--DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK 82 (316)
T ss_dssp -----------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred eeeeccccc--CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence 344778999 999999999 9999999999999999998875 5678899999999999986 4899999999999
Q ss_pred EEEEEccCCcEEEEEecccccccEEEEEECCC--CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEE
Q psy12614 135 INLFQISDEGLLYEKLLDRQQGRILCTAWHSS--GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAF 211 (708)
Q Consensus 135 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 211 (708)
|++||+++++......+.+|...|.+++|+|+ +.+|++++.| .|++||+..+......... . .|...+.+++|
T Consensus 83 v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~-~---~h~~~v~~~~~ 158 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKIN-N---AHTIGCNAVSW 158 (316)
T ss_dssp EEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBT-T---SSSSCBCCCEE
T ss_pred EEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeee-c---cccCCcceEEE
Confidence 99999998754333677889999999999998 7899999999 9999999876433221111 1 44778999999
Q ss_pred ccC-----------------C-EEEEEcCCCcEEEEeCCCC---eeEEEeeccccCeEEEEEeCCC----CEEEEEecCC
Q psy12614 212 CAD-----------------F-TIITGDSGGFVRFWDGKTG---VQWSDVKTHKKDILALTVSEDE----NYLYCAGVDP 266 (708)
Q Consensus 212 ~~~-----------------~-~l~~~~~dg~i~~wd~~~~---~~~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg 266 (708)
+|+ + .+++++.|+.|++||++.+ +.+..+.+|...|.+++|+|++ ++|++++.|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 159 APAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp CCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC
T ss_pred ccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC
Confidence 997 2 4899999999999999755 4677889999999999999986 8999999999
Q ss_pred eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCC
Q psy12614 267 TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 267 ~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~ 330 (708)
.|++|++.+ ... ..+ ....+..|...|.+++|+ +.+|++++.|+.|++|+..
T Consensus 239 ~v~iw~~~~--------~~~---~~~-~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 239 RVFIWTCDD--------ASS---NTW-SPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEEEECSS--------TTC---CCC-BCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred eEEEEEccC--------ccc---cch-hhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999999876 210 000 112345788999999999 8899999999999999975
No 100
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.7e-32 Score=279.98 Aligned_cols=243 Identities=19% Similarity=0.338 Sum_probs=216.0
Q ss_pred ccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCC
Q psy12614 22 YAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~ 101 (708)
+.+|...|++++|+|+|++||+|+.||.|+|||+.+++.+. .+.+|. ..|.++++++..|++++.|+.+++||....
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~-~~~~h~--~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR-NMTSHS--ARVGSLSWNSYILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE-EECCCS--SCEEEEEEETTEEEEEETTSEEEEEETTSS
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE-EEeCCC--CceEEEeeCCCEEEEEeCCCceeEeeeccc
Confidence 45788999999999999999999999999999999998886 899999 999999999999999999999999998874
Q ss_pred -eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEE--EEEecccccccEEEEEECCCCC-EEEE--ecC
Q psy12614 102 -NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL--YEKLLDRQQGRILCTAWHSSGD-YLVT--GCA 175 (708)
Q Consensus 102 -~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~s~d~~-~l~~--~~~ 175 (708)
..+..+.+|...+..+.++|+++++++++.|+.+++|+..+++.. .......|...|.+++|+|++. .+++ |+.
T Consensus 220 ~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~ 299 (420)
T 4gga_A 220 EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 299 (420)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT
T ss_pred ceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecC
Confidence 466788999999999999999999999999999999999876531 1145667889999999999765 4444 456
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEE--cCCCcEEEEeCCCCeeEEEeeccccCeEEEE
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITG--DSGGFVRFWDGKTGVQWSDVKTHKKDILALT 251 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~--~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~ 251 (708)
| .|++||+.+++....+.. ...+.++.|+|++. ++++ ..||.|++||+.+++++..+.+|.+.|.+++
T Consensus 300 D~~I~iwd~~t~~~~~~~~~--------~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~ 371 (420)
T 4gga_A 300 DRHIRIWNVCSGACLSAVDA--------HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLT 371 (420)
T ss_dssp TCEEEEEETTTTEEEEEEEC--------SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred CCEEEEEeCCccccceeecc--------ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 7 999999999999888764 46688999999884 5544 4799999999999999999999999999999
Q ss_pred EeCCCCEEEEEecCCeEEEEEccC
Q psy12614 252 VSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 252 ~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
|+|||++|++|+.|++|++||+..
T Consensus 372 ~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 372 MSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp ECTTSSCEEEEETTTEEEEECCSC
T ss_pred EcCCCCEEEEEecCCeEEEEECCC
Confidence 999999999999999999999976
No 101
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.4e-32 Score=282.93 Aligned_cols=284 Identities=17% Similarity=0.263 Sum_probs=237.8
Q ss_pred ecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE
Q psy12614 66 IGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL 145 (708)
Q Consensus 66 ~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~ 145 (708)
.+|. ..|.+++|.+++|++|+.||.|++||+.+++....+.+|.+.|.+++| ++++|++|+.||.|++||+.+++.
T Consensus 130 ~~~~--~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 130 SETS--KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CSSC--CCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred cCCC--CcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE
Confidence 3455 789999999999999999999999999999999999999999999999 788999999999999999999988
Q ss_pred EEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCC
Q psy12614 146 LYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGG 224 (708)
Q Consensus 146 ~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg 224 (708)
. ..+.+|...|.+++|++ .++++++.| .|++||+.++.......... ++...|.+++| ....+++++.||
T Consensus 206 ~--~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~----~~~~~v~~~~~-~~~~l~s~~~dg 276 (435)
T 1p22_A 206 L--NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLV----GHRAAVNVVDF-DDKYIVSASGDR 276 (435)
T ss_dssp E--EEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEEC----CCSSCEEEEEE-ETTEEEEEETTS
T ss_pred E--EEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEec----CCCCcEEEEEe-CCCEEEEEeCCC
Confidence 7 77889999999999974 589999999 99999999887654322211 44888999999 233699999999
Q ss_pred cEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc
Q psy12614 225 FVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304 (708)
Q Consensus 225 ~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 304 (708)
.|++||+++++.+..+.+|...|.+++++ ++++++|+.||.|++||+.+ ++ ....+.+|...
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~--------~~--------~~~~~~~h~~~ 338 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC--------GA--------CLRVLEGHEEL 338 (435)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT--------CC--------EEEEECCCSSC
T ss_pred eEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCC--------CC--------EEEEEeCCcCc
Confidence 99999999999999999999999999994 67999999999999999998 76 67788899999
Q ss_pred eEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCC
Q psy12614 305 VKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTT 384 (708)
Q Consensus 305 v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 384 (708)
|.++++.+.+|++++.||.|++||+.+.......
T Consensus 339 v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~---------------------------------------------- 372 (435)
T 1p22_A 339 VRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAP---------------------------------------------- 372 (435)
T ss_dssp EEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSC----------------------------------------------
T ss_pred EEEEEecCCEEEEEeCCCcEEEEECCCCCCcccc----------------------------------------------
Confidence 9999999999999999999999998543210000
Q ss_pred cccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEec
Q psy12614 385 GVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLD 434 (708)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~ 434 (708)
...........|...|.+++| ++.+|+++. ||.|++|++...
T Consensus 373 ------~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 373 ------AGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp ------TTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred ------ccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 000133344578888999999 677888855 999999999863
No 102
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8e-33 Score=284.90 Aligned_cols=316 Identities=16% Similarity=0.207 Sum_probs=247.1
Q ss_pred CCcEEEEECCCCeEeEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEe-----------ccccccc
Q psy12614 90 QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKL-----------LDRQQGR 157 (708)
Q Consensus 90 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~-----------~~~~~~~ 157 (708)
++.+++|+++.++....+.+|.+.|++++|+| ++++||+++.||.|++||+.+++...... ..+|...
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 45678888888888888999999999999999 99999999999999999999876431111 1258999
Q ss_pred EEEEEECC-CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC----EEEEEcCCCcEEEEeC
Q psy12614 158 ILCTAWHS-SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF----TIITGDSGGFVRFWDG 231 (708)
Q Consensus 158 v~~~~~s~-d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~l~~~~~dg~i~~wd~ 231 (708)
|.+++|+| ++.+|++++.| .|++||+.+++....+.. ...+.++.+++.+ .+++++.+|.|++||+
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNF--------EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEEC--------SSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccC--------CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 99999999 77899999999 999999999998887753 5678899998854 4889999999999999
Q ss_pred CCCeeEEEeeccccCeEEEEEeCCCC-EEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEE
Q psy12614 232 KTGVQWSDVKTHKKDILALTVSEDEN-YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310 (708)
Q Consensus 232 ~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~ 310 (708)
++++.+..+.+|...|.+++|+|+++ .|++++.||.|++||+...........................|...|.+++|
T Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 174 KSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp SSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred CCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 99999999999999999999999998 58899999999999998721000000000000000011222578899999999
Q ss_pred e--CCEEEEEcCCCeEEEEeCCCCceeecC-c----c--CCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCC
Q psy12614 311 H--GNRLYSGGLDSYLSLSYYPPKTLVKYP-C----T--LAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHS 381 (708)
Q Consensus 311 ~--~~~l~s~~~d~~i~iw~~~~~~~~~~~-~----~--~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~ 381 (708)
+ +.+|++++.|+.|++||+.+....... . . ..............+++.+.++.+.+|++.++.
T Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-------- 325 (408)
T 4a11_B 254 TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGE-------- 325 (408)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCC--------
T ss_pred cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCc--------
Confidence 9 889999999999999999886532211 0 0 111122333445667777899999999998866
Q ss_pred CCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEec
Q psy12614 382 NTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLD 434 (708)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~ 434 (708)
......+|...|.+++|+|++++|+++. ||.|++|++...
T Consensus 326 -------------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 326 -------------QITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp -------------EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred -------------ceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 4445567899999999999999999855 999999999873
No 103
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.5e-31 Score=261.68 Aligned_cols=278 Identities=13% Similarity=0.114 Sum_probs=221.7
Q ss_pred EEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEee--ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCC
Q psy12614 206 VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK--THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTS 283 (708)
Q Consensus 206 v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 283 (708)
..+++|++++.|++| .|++|++||+.+++.+..+. +|...|.+++|+|++++|++|+.||.|++|++.+
T Consensus 28 ~~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~-------- 98 (318)
T 4ggc_A 28 LNLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ-------- 98 (318)
T ss_dssp CBCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT--------
T ss_pred ceEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC--------
Confidence 467899999855554 69999999999999887765 5778899999999999999999999999999998
Q ss_pred CCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCe
Q psy12614 284 GPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSH 363 (708)
Q Consensus 284 g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~ 363 (708)
++ ....+.+|...+.++.+.+..+++++.++.+++|+.....
T Consensus 99 ~~--------~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~------------------------------ 140 (318)
T 4ggc_A 99 QK--------RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAE------------------------------ 140 (318)
T ss_dssp TE--------EEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS------------------------------
T ss_pred ce--------eEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCc------------------------------
Confidence 75 6778889999999988889999999999999888774431
Q ss_pred EEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEE
Q psy12614 364 LELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISR 442 (708)
Q Consensus 364 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~ 442 (708)
.......+|...+..+++++++++++++. |+.|++||+.+++.......
T Consensus 141 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 190 (318)
T 4ggc_A 141 ------------------------------HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQ 190 (318)
T ss_dssp ------------------------------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSE
T ss_pred ------------------------------eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccccccee
Confidence 22333447788899999999999999855 99999999987543321111
Q ss_pred eecCCcccccceeEEEEEecCCCeEE---EEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEE
Q psy12614 443 IKNLPAPLFKSIFTHVLISADSTLLL---AVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCA 517 (708)
Q Consensus 443 ~~~~~~~~~~~~i~~~~~s~d~~~l~---~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 517 (708)
....+ ...|.+++++|++..++ +++.++. +|+.... ........ ...+..+.|+|++..++++
T Consensus 191 --~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~--~~~~~~~~------~~~v~~~~~~~~~~~~~~~ 258 (318)
T 4ggc_A 191 --TFTQH--QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG--ACLSAVDA------HSQVCSILWSPHYKELISG 258 (318)
T ss_dssp --EECCC--CSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTC--CEEEEEEC------SSCEEEEEEETTTTEEEEE
T ss_pred --eeccc--CCceEEEEecCCCCcEEEEEecCCCCEEEEEecccc--cccccccc------eeeeeeeeecccccceEEE
Confidence 12223 33677799999876544 3344555 7887766 33333332 5579999999999998876
Q ss_pred e--cCCeEEEEECC--ceeeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCC
Q psy12614 518 D--RKSHVVIWKNG--QHHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKA 572 (708)
Q Consensus 518 ~--~d~~i~iw~~~--~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~ 572 (708)
+ .|+.|++||+. +....+.+|.+.|++++|+||+++||+++.||+|+|||+.+..
T Consensus 259 sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 259 HGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp ECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 5 79999999999 4455899999999999999999999999999999999997653
No 104
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.1e-32 Score=283.16 Aligned_cols=314 Identities=12% Similarity=0.112 Sum_probs=229.1
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe-----------EeEEEeecC------------CceEEEEEecCC--C
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN-----------IKSSTAVTS------------GTCWCLSVHKKK--R 124 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~-----------~~~~~~~~~------------~~v~~~~~s~~~--~ 124 (708)
+.|.+++|+ +++|++|+.||.|++||+.+++ ....+.+|. +.|.+++|+|++ .
T Consensus 29 ~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~ 108 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAA 108 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSS
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcc
Confidence 799999999 8999999999999999999877 578889998 889999999998 7
Q ss_pred EEEEEeCCCcEEEEEccCCcEEE--------------------------------------EEecccccccEEEEEECCC
Q psy12614 125 LLAAGTEQGHINLFQISDEGLLY--------------------------------------EKLLDRQQGRILCTAWHSS 166 (708)
Q Consensus 125 ~la~~~~d~~i~iwd~~~~~~~~--------------------------------------~~~~~~~~~~v~~~~~s~d 166 (708)
+|++++.|+.|++||+.++.... .....+|...|.+++|+|+
T Consensus 109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 188 (447)
T 3dw8_B 109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD 188 (447)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT
T ss_pred eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC
Confidence 99999999999999998654320 0124679999999999999
Q ss_pred CCEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCC-E-EEEEcCCCcEEEEeCCCCee----EE
Q psy12614 167 GDYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADF-T-IITGDSGGFVRFWDGKTGVQ----WS 238 (708)
Q Consensus 167 ~~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~~wd~~~~~~----~~ 238 (708)
+++|+++ .| .|++||+.+ ++.+..+.........|...|.+++|+|++ . +++++.||.|++||+++++. +.
T Consensus 189 ~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 267 (447)
T 3dw8_B 189 YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSK 267 (447)
T ss_dssp SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCE
T ss_pred CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceee
Confidence 9999998 67 999999984 334433311100000348889999999997 4 99999999999999999886 67
Q ss_pred Eeecccc------------CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc--
Q psy12614 239 DVKTHKK------------DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD-- 304 (708)
Q Consensus 239 ~~~~~~~------------~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-- 304 (708)
.+.+|.. .|.+++|+|++++|++++. +.|++||+... ++ ....+.+|...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~-------~~--------~~~~~~~~~~~~~ 331 (447)
T 3dw8_B 268 LFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNME-------NR--------PVETYQVHEYLRS 331 (447)
T ss_dssp EECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCC-------SS--------CSCCEESCGGGTT
T ss_pred EeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCC-------cc--------ccceeeccccccc
Confidence 8887776 8999999999999999998 99999999750 11 23445556432
Q ss_pred -------------eEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEe
Q psy12614 305 -------------VKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSL 369 (708)
Q Consensus 305 -------------v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~ 369 (708)
+..++|+ +.+|++++.|+.|++||+.+.....+..+..........+.......+..
T Consensus 332 ~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 403 (447)
T 3dw8_B 332 KLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKR-------- 403 (447)
T ss_dssp THHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCC--------
T ss_pred cccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCc--------
Confidence 2348888 88999999999999999988764433311111110000011100000000
Q ss_pred cCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEE
Q psy12614 370 GSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSL 431 (708)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~ 431 (708)
...............|..++|+|++.+||++..+.+++|..
T Consensus 404 ---------------------~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 404 ---------------------KKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQD 444 (447)
T ss_dssp ---------------------CTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEEC
T ss_pred ---------------------ccccccccccccCCceeEEEECCCCCEEEEEecceeeeecc
Confidence 00001111113456789999999999999988777888864
No 105
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-33 Score=305.30 Aligned_cols=250 Identities=15% Similarity=0.210 Sum_probs=213.3
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC--CCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcE
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISE--TPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFV 93 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~--~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i 93 (708)
.++.+|.+.|++++|+|++++||+|+.||.|+|||+.+ +..+ ..+.+|. ++|.+++|+ +++|++++.||+|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~-~~l~~h~--~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLI-DTLTGHE--GPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEE-EEECCCS--SCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccc-eeccCCc--CceEEEEecCCCCCCEEEEEeCCCeE
Confidence 46789999999999999999999999999999999984 3444 4888999 999999998 6899999999999
Q ss_pred EEEECCCCe--EeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC----
Q psy12614 94 NEYDMRRLN--IKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS---- 165 (708)
Q Consensus 94 ~vwd~~~~~--~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~---- 165 (708)
++||+.+++ ....+.+|...|.+++|+|+ ++++++|+.||.|++||+.++.......+.+|...|.+++|+|
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc
Confidence 999999987 77788899999999999999 9999999999999999999874433356778999999999999
Q ss_pred ---------CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC---CE-EEEEcCCCcEEEEeC
Q psy12614 166 ---------SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD---FT-IITGDSGGFVRFWDG 231 (708)
Q Consensus 166 ---------d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~-l~~~~~dg~i~~wd~ 231 (708)
++.+|++++.| .|++||+.++........... .|...|.+++|+|+ +. +++++.||.|++||+
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~---~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE---GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC---CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec---CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 58999999999 999999988754322222111 34889999999999 75 899999999999999
Q ss_pred CCCe-----eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 232 KTGV-----QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 232 ~~~~-----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.+++ .......|...|.+++|+|++++|++++.||.|++|++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 237 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 8864 3333456889999999999999999999999999999986
No 106
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=6.8e-32 Score=276.68 Aligned_cols=284 Identities=14% Similarity=0.151 Sum_probs=229.8
Q ss_pred CcEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCCe---EEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECC
Q psy12614 27 KVINCIACEPKSSRLA-VSRADQSIEIWDISETPH---VDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMR 99 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la-~~~~dg~v~iwd~~~~~~---~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~ 99 (708)
.....++++|+...++ +|+.||.|+||++..... ....+.+|. +.|.+++|+ +++|++++.||+|++||+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~--~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~ 112 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHT--APVLDIAWCPHNDNVIASGSEDCTVMVWEIP 112 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCS--SCEEEEEECTTCTTEEEEEETTSEEEEEECC
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCC--CCEEEEEeCCCCCCEEEEEeCCCeEEEEEcc
Confidence 3455788999875544 578899999999976421 112678899 999999998 7899999999999999999
Q ss_pred CC-------eEeEEEeecCCceEEEEEecCC-CEEEEEeCCCcEEEEEccCCcEEEEEec--ccccccEEEEEECCCCCE
Q psy12614 100 RL-------NIKSSTAVTSGTCWCLSVHKKK-RLLAAGTEQGHINLFQISDEGLLYEKLL--DRQQGRILCTAWHSSGDY 169 (708)
Q Consensus 100 ~~-------~~~~~~~~~~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~s~d~~~ 169 (708)
++ +++..+.+|...|.+++|+|++ ++|++++.|+.|++||+.+++.. ..+ ..|...|.+++|+|++++
T Consensus 113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV--LTLGPDVHPDTIYSVDWSRDGAL 190 (402)
T ss_dssp TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE--EEECTTTCCSCEEEEEECTTSSC
T ss_pred CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc--EEEecCCCCCceEEEEECCCCCE
Confidence 98 6788899999999999999998 69999999999999999999887 566 789999999999999999
Q ss_pred EEEecCC-eEEEEEcCCCceEEEEEecccCCCCCce-eEEEEEEccCCE-EEEE---cCCCcEEEEeCCCCee-EEEee-
Q psy12614 170 LVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNT-AVWCVAFCADFT-IITG---DSGGFVRFWDGKTGVQ-WSDVK- 241 (708)
Q Consensus 170 l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~-l~~~---~~dg~i~~wd~~~~~~-~~~~~- 241 (708)
|++++.| .|++||+++++.+..+...+ .. .+.+++|+|+++ +++| +.++.|++||+++++. +....
T Consensus 191 l~~~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 264 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPRKGTVVAEKDRPH------EGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL 264 (402)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSS------CSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC
T ss_pred EEEEecCCcEEEEeCCCCceeeeeccCC------CCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec
Confidence 9999999 99999999999888874331 33 488999999997 6666 6899999999988654 32222
Q ss_pred ccccCeEEEEEeCCCCEEEE-EecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEE
Q psy12614 242 THKKDILALTVSEDENYLYC-AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSG 318 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~ 318 (708)
.|...+.+++|+|++++|++ ++.||.|++|++.+ ++ ......... .|...|.+++|+ +.+++
T Consensus 265 ~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~--------~~----~~~~~l~~~-~~~~~v~~~~~sp~~~~~~-- 329 (402)
T 2aq5_A 265 DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS--------EA----PFLHYLSMF-SSKESQRGMGYMPKRGLEV-- 329 (402)
T ss_dssp CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS--------ST----TCEEEEEEE-CCSSCCSEEEECCGGGSCG--
T ss_pred cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC--------CC----cceEeeccc-ccCCcccceEEecccccce--
Confidence 46788999999999999975 45799999999988 43 111122222 256899999999 44444
Q ss_pred cCCCeEEEEeCCCCcee
Q psy12614 319 GLDSYLSLSYYPPKTLV 335 (708)
Q Consensus 319 ~~d~~i~iw~~~~~~~~ 335 (708)
+.++.+++|++.+..+.
T Consensus 330 s~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 330 NKCEIARFYKLHERKCE 346 (402)
T ss_dssp GGTEEEEEEEEETTEEE
T ss_pred ecceeEEEEEcCCCcEE
Confidence 46779999999776533
No 107
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-31 Score=274.15 Aligned_cols=281 Identities=10% Similarity=0.065 Sum_probs=229.7
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC---eEEEEEecCC----------------------------------
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETP---HVDRVFIGDP---------------------------------- 69 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~---~~~~~~~~h~---------------------------------- 69 (708)
.++++++|+|+|++|+++. ++.|.+||+.+++ .+. .+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~~-~~~i~v~d~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII-KNCILSFKYQSPNHWEFAG-KWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE-TTEEEEEEEETTTEEEEEE-EEECCC----------------------------------
T ss_pred ccEEEEEecCCCCEEEEEe-CCeEEEEECCCCCcceeee-ecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4688999999999777765 6799999999988 443 333221
Q ss_pred ------------------CCCcEEEEEEe--CCEE-EEEcCCCcEEEEECC--CCeEeEEEe--ecCCceEEEEEecCCC
Q psy12614 70 ------------------LSNSIECLTWF--NDRL-FSGGLQGFVNEYDMR--RLNIKSSTA--VTSGTCWCLSVHKKKR 124 (708)
Q Consensus 70 ------------------~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~--~~~~~~~~~--~~~~~v~~~~~s~~~~ 124 (708)
..+.|.+++|+ +++| ++++.||.|++||+. +++.+..+. .|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 01479999999 7886 899999999999999 888888886 5678999999999999
Q ss_pred EEEEEeCCCcEEEEEccCCcEE--EEEecccccccEEEEEECCC---CCEEEEecCC-eEEEEEcCCCceEEEEEecccC
Q psy12614 125 LLAAGTEQGHINLFQISDEGLL--YEKLLDRQQGRILCTAWHSS---GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSS 198 (708)
Q Consensus 125 ~la~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~s~d---~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~ 198 (708)
+|++++.+|.|++|++.+++.. ....+.+|...|.+++|+|+ +++|++++.| .|++||+.+++.+..+..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~---- 238 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF---- 238 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC----
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec----
Confidence 9999999999999999877653 11267789999999999999 9999999999 999999999988877543
Q ss_pred CCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec-------------------------cccCeEEEEE
Q psy12614 199 KFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT-------------------------HKKDILALTV 252 (708)
Q Consensus 199 ~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~-------------------------~~~~i~~~~~ 252 (708)
+|...|.+++|+ ++. +++++.|+.|++||+.+++.+..+.. ....|.+++|
T Consensus 239 --~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 239 --GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp --CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred --CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 338899999999 884 89999999999999999998887763 2357899999
Q ss_pred eCCCCEEEEEe-cCCeEEEEEc--cCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcC-------C
Q psy12614 253 SEDENYLYCAG-VDPTVVCFQR--TRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGL-------D 321 (708)
Q Consensus 253 s~~~~~l~~~~-~dg~i~iw~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~-------d 321 (708)
+|++++|++++ .++.|++|++ .. + ..+.....+..| ..|.+++|+ +..+++.+. +
T Consensus 316 ~~~~~~l~~~~~~d~~i~iw~~~~~~--------~-----~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~ 381 (450)
T 2vdu_B 316 SKNLPFVAFFVEATKCIIILEMSEKQ--------K-----GDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQK 381 (450)
T ss_dssp CSSSSEEEEEETTCSEEEEEEECSSS--------T-----TCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCC
T ss_pred eCCCCEEEEEECCCCeEEEEEeccCC--------C-----CceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCC
Confidence 99999999998 8999999999 33 2 123356667777 889999999 555555543 4
Q ss_pred CeEEEEeCC
Q psy12614 322 SYLSLSYYP 330 (708)
Q Consensus 322 ~~i~iw~~~ 330 (708)
..|.+|.+.
T Consensus 382 ~~i~v~~~~ 390 (450)
T 2vdu_B 382 NFAKFIEYN 390 (450)
T ss_dssp CSEEEEEEE
T ss_pred cceEEEEEE
Confidence 456777653
No 108
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=6.5e-31 Score=264.38 Aligned_cols=211 Identities=11% Similarity=0.167 Sum_probs=180.7
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCC----eEeEEEeecCCceEEEEEec--CCCEEEEEeCCCc
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRL----NIKSSTAVTSGTCWCLSVHK--KKRLLAAGTEQGH 134 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~----~~~~~~~~~~~~v~~~~~s~--~~~~la~~~~d~~ 134 (708)
..+.+|. +.|++++|+ +++|++++.||.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||.
T Consensus 5 ~~~~gH~--~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 5 PFDSGHD--DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CEECCCS--SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ccCcccc--cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 3788999 999999999 889999999999999999976 56777889999999999999 6999999999999
Q ss_pred EEEEEccCCcE-------EEEEecccccccEEEEEECCC--CCEEEEecCC-eEEEEEcCCCceEEEEEecc------cC
Q psy12614 135 INLFQISDEGL-------LYEKLLDRQQGRILCTAWHSS--GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDK------SS 198 (708)
Q Consensus 135 i~iwd~~~~~~-------~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~------~~ 198 (708)
|++||+.+++. .....+..|...|.+++|+|+ +++|++++.| .|++||+.+++.+..+.... ..
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 99999988631 223678889999999999999 9999999999 99999999877544333210 00
Q ss_pred CCCCceeEEEEEEccC---C-EEEEEcCCCcEEEEeCCCCee--EEEeeccccCeEEEEEeCCC----CEEEEEecCCeE
Q psy12614 199 KFSKNTAVWCVAFCAD---F-TIITGDSGGFVRFWDGKTGVQ--WSDVKTHKKDILALTVSEDE----NYLYCAGVDPTV 268 (708)
Q Consensus 199 ~~~~~~~v~~~~~~~~---~-~l~~~~~dg~i~~wd~~~~~~--~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~i 268 (708)
...+...+.+++|+|+ + .+++++.++.+.+|+...++. +..+.+|...|.+++|+|++ ++|++++.||.|
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 0033778999999997 5 499999999999998887765 67788899999999999998 899999999999
Q ss_pred EEEEccC
Q psy12614 269 VCFQRTR 275 (708)
Q Consensus 269 ~iw~~~~ 275 (708)
++||+..
T Consensus 243 ~iwd~~~ 249 (351)
T 3f3f_A 243 RIFKITE 249 (351)
T ss_dssp EEEEEEE
T ss_pred EEEeCCC
Confidence 9999987
No 109
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-31 Score=269.05 Aligned_cols=250 Identities=13% Similarity=0.183 Sum_probs=214.6
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECC--CCeEeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEE
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMR--RLNIKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINL 137 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~--~~~~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~i 137 (708)
.+.+|. ..|.+++|+ +++|++++.||.|++||+. +++.+..+.+|.+.|++++|+++ +++|++++.||.|++
T Consensus 6 ~~~~h~--~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 6 IANAHN--ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp CEEECC--CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred EecCCc--ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 788999 999999999 8999999999999999998 56778889999999999999987 999999999999999
Q ss_pred EEccCCcEEEEEecccccccEEEEEECCC--CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc-
Q psy12614 138 FQISDEGLLYEKLLDRQQGRILCTAWHSS--GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA- 213 (708)
Q Consensus 138 wd~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 213 (708)
||+.+++......+..|...|.+++|+|+ +.+|++++.| .|++||+.++......... .+...|.+++|+|
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-----~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-----AHAIGVNSASWAPA 158 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE-----CCTTCEEEEEECCC
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEec-----CCCCceEEEEEcCc
Confidence 99999985545778889999999999999 9999999999 9999999987544333332 4488899999999
Q ss_pred ------------CC-EEEEEcCCCcEEEEeCCCCe----eEEEeeccccCeEEEEEeCC---CCEEEEEecCCeEEEEEc
Q psy12614 214 ------------DF-TIITGDSGGFVRFWDGKTGV----QWSDVKTHKKDILALTVSED---ENYLYCAGVDPTVVCFQR 273 (708)
Q Consensus 214 ------------~~-~l~~~~~dg~i~~wd~~~~~----~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~iw~~ 273 (708)
++ .+++++.||.|++||++++. ....+.+|...|.+++|+|+ +++|++++.||.|++||+
T Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp C----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred cccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 56 49999999999999997764 45677889999999999999 899999999999999999
Q ss_pred cCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 274 TRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 274 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
.. ++ ............|...|.+++|+ +.+|++++.||.|++|++..
T Consensus 239 ~~--------~~---~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 239 DN--------EQ---GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SS--------TT---SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CC--------CC---ccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 88 42 00011222233488899999998 88999999999999999864
No 110
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.3e-31 Score=263.10 Aligned_cols=244 Identities=13% Similarity=0.108 Sum_probs=203.2
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe---EeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEE
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN---IKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINL 137 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~---~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~i 137 (708)
...+|. +.|.+++|+ +++|++++.|+.|++||+.+++ ....+..|...|.+++|+|+++ +|++++.||.|++
T Consensus 6 ~~~~h~--~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 6 IEQAPK--DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp CSSCCS--SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred cccCCC--CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 445788 999999999 8999999999999999998877 4555668999999999999999 9999999999999
Q ss_pred EEc-cCCcEEEEEeccc--ccccEEEEEECCCCCEEEEecCC-eEEEEEcCC---------CceEEEEEecccCCCCCce
Q psy12614 138 FQI-SDEGLLYEKLLDR--QQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHK---------GHAIHKMSLDKSSKFSKNT 204 (708)
Q Consensus 138 wd~-~~~~~~~~~~~~~--~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~ 204 (708)
||+ .+++. ..+.+ |...|.+++|+| +++|++++.| .|++||+.+ ++.+..+ .+..
T Consensus 84 wd~~~~~~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--------~~~~ 151 (342)
T 1yfq_A 84 VDLIGSPSF---QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT--------KVKN 151 (342)
T ss_dssp ECSSSSSSE---EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS--------SSCC
T ss_pred EEeccCCce---EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE--------eeCC
Confidence 999 88876 56778 999999999999 9999999999 999999986 4444333 2378
Q ss_pred eEEEEEEccCCEEEEEcCCCcEEEEeCCC-Ce--eEEEeeccccCeEEEEEeC-CCCEEEEEecCCeEEEEEccCCcccc
Q psy12614 205 AVWCVAFCADFTIITGDSGGFVRFWDGKT-GV--QWSDVKTHKKDILALTVSE-DENYLYCAGVDPTVVCFQRTRKPQVC 280 (708)
Q Consensus 205 ~v~~~~~~~~~~l~~~~~dg~i~~wd~~~-~~--~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~ 280 (708)
.+.+++|+|++ +++++.++.|++||+++ +. .......|...+.+++|+| +++++++++.||.+++|++..
T Consensus 152 ~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~----- 225 (342)
T 1yfq_A 152 KIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD----- 225 (342)
T ss_dssp CEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT-----
T ss_pred ceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcC-----
Confidence 89999999998 99999999999999988 54 3334456888999999999 999999999999999999987
Q ss_pred cCCCCCCCCcceEEeEEEecccc---------ceEEEEEe--CCEEEEEcCCCeEEEEeCCCC
Q psy12614 281 STSGPEQGSSVWVRSVNRVIHEG---------DVKSLALH--GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 281 ~~~g~~~~~~~~~~~~~~~~~~~---------~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~ 332 (708)
+.. .........+..|.. .|.+++|+ +.+|++++.||.|++||+.+.
T Consensus 226 ---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 226 ---QGD--DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp ---TCC--STTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred ---CCc--ccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH
Confidence 300 000002344556644 88999888 788888999999888887654
No 111
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.98 E-value=3.2e-31 Score=271.64 Aligned_cols=244 Identities=14% Similarity=0.242 Sum_probs=210.5
Q ss_pred eeeccCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC-------CeEEEEEecCCCCCcEEEEEEe--C-CEEEEE
Q psy12614 19 IKFYAPEPKVINCIACEP-KSSRLAVSRADQSIEIWDISET-------PHVDRVFIGDPLSNSIECLTWF--N-DRLFSG 87 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~~-------~~~~~~~~~h~~~~~v~~l~~~--~-~~l~s~ 87 (708)
...+.+|.+.|++++|+| ++++||+|+.||.|+|||+.++ +.+. .+.+|. ..|.+++|+ + ++|+++
T Consensus 74 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~-~~~~h~--~~v~~~~~~p~~~~~l~s~ 150 (402)
T 2aq5_A 74 VPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVI-TLEGHT--KRVGIVAWHPTAQNVLLSA 150 (402)
T ss_dssp CCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSE-EEECCS--SCEEEEEECSSBTTEEEEE
T ss_pred CceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceE-EecCCC--CeEEEEEECcCCCCEEEEE
Confidence 345789999999999999 9999999999999999999987 4444 889999 999999999 4 699999
Q ss_pred cCCCcEEEEECCCCeEeEEE--eecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec-cccccc-EEEEEE
Q psy12614 88 GLQGFVNEYDMRRLNIKSST--AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL-DRQQGR-ILCTAW 163 (708)
Q Consensus 88 ~~d~~i~vwd~~~~~~~~~~--~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~-v~~~~~ 163 (708)
+.||.|++||+.+++.+..+ ..|...|.+++|+|++++|++++.|+.|++||+.+++.. ..+ ..|.+. +.+++|
T Consensus 151 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 151 GCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVV--AEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp ETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEE--EEEECSSCSSSCCEEEE
T ss_pred cCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCcee--eeeccCCCCCcceEEEE
Confidence 99999999999999999999 789999999999999999999999999999999998876 455 677665 899999
Q ss_pred CCCCCEEEEe---cCC-eEEEEEcCCCce-EEEEEecccCCCCCceeEEEEEEccCCE-E-EEEcCCCcEEEEeCCCCee
Q psy12614 164 HSSGDYLVTG---CAA-AVRVWDIHKGHA-IHKMSLDKSSKFSKNTAVWCVAFCADFT-I-ITGDSGGFVRFWDGKTGVQ 236 (708)
Q Consensus 164 s~d~~~l~~~---~~d-~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~i~~wd~~~~~~ 236 (708)
+|++++|+++ +.+ .|++||+.+++. +..... .+...+.+++|+|++. + ++++.||.|++||+.+++.
T Consensus 229 ~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 229 VSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL------DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp CSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC------CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred cCCCcEEEEeccCCCCceEEEEcCccccCCceEEec------cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 9999999999 788 999999998765 333332 2267799999999995 5 4667899999999998874
Q ss_pred -EEEeec--cccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 237 -WSDVKT--HKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 237 -~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+..+.. |...|.+++|+|++.++++ .++.+++|++.+
T Consensus 303 ~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 303 FLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp CEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred ceEeecccccCCcccceEEeccccccee--cceeEEEEEcCC
Confidence 444444 4589999999999988764 567999999987
No 112
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.98 E-value=1.5e-30 Score=263.70 Aligned_cols=302 Identities=13% Similarity=0.197 Sum_probs=226.8
Q ss_pred EEECCCCeEeEEEeecCCceEEEEEecC---CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEE
Q psy12614 95 EYDMRRLNIKSSTAVTSGTCWCLSVHKK---KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLV 171 (708)
Q Consensus 95 vwd~~~~~~~~~~~~~~~~v~~~~~s~~---~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 171 (708)
.|+....+.+..+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+........+.+|.+.|.+++|+|++++|+
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 4556667788888999999999999999 5999999999999999999733333367888999999999999999999
Q ss_pred EecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEE--ccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCe
Q psy12614 172 TGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAF--CADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI 247 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i 247 (708)
+++.| .|++||+.+++.+... .+...|.+++| +|++. +++++.||.|++||+++++.+..+..+. .+
T Consensus 103 s~~~dg~v~iwd~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~ 173 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQIA--------QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RC 173 (368)
T ss_dssp EEETTSEEEEEETTTTEEEEEE--------ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CE
T ss_pred EEcCCCcEEEEEcCCCCceeec--------cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-Cc
Confidence 99999 9999999998877643 23788999999 88886 8999999999999999999988888654 66
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC----EEEEEcCC
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN----RLYSGGLD 321 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~----~l~s~~~d 321 (708)
.++.+.+ ..+++++.++.+.+|++.. .. ..+ ......+...+..+++. .. .+++++.|
T Consensus 174 ~~~~~~~--~~~~~~~~~~~i~~~~~~~--------~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 237 (368)
T 3mmy_A 174 YCADVIY--PMAVVATAERGLIVYQLEN--------QP----SEF--RRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE 237 (368)
T ss_dssp EEEEEET--TEEEEEEGGGCEEEEECSS--------SC----EEE--EECCCSCSSCEEEEEEEECTTSCEEEEEEEETT
T ss_pred eEEEecC--CeeEEEeCCCcEEEEEecc--------cc----chh--hhccccccCCCceEEEcccCCCCCCeEEEecCC
Confidence 6666664 4788999999999999987 32 111 11112233444555444 33 39999999
Q ss_pred CeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEec
Q psy12614 322 SYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAV 401 (708)
Q Consensus 322 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (708)
+.+++|++......... ..+...... ........
T Consensus 238 g~i~i~~~~~~~~~~~~--------------------------~~~~~~~~~--------------------~~~~~~~~ 271 (368)
T 3mmy_A 238 GRVAIHYINPPNPAKDN--------------------------FTFKCHRSN--------------------GTNTSAPQ 271 (368)
T ss_dssp SEEEEEESSCSCHHHHS--------------------------EEEECSEEC------------------------CCCE
T ss_pred CcEEEEecCCCCccccc--------------------------eeeeeeecc--------------------cccccccc
Confidence 99999999765321111 000000000 00001112
Q ss_pred CCCceEEEEeCCCCcEEEEE-cCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc
Q psy12614 402 NNATIRCSVVSNDGKYVAYS-TESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP 475 (708)
Q Consensus 402 ~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~ 475 (708)
+...|.+++|+|++++|+++ .||.|++||+.. .. .+.. +..|.. .|++++|+|||++|++++.|+.
T Consensus 272 ~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~--~~-~~~~---~~~~~~--~v~~~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 272 DIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA--RT-KLKT---SEQLDQ--PISACCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp EECCEEEEEECTTTCCEEEEETTSCEEEEETTT--TE-EEEE---CCCCSS--CEEEEEECTTSSCEEEEECCCS
T ss_pred cccceEEEEEecCCCEEEEEccCCeEEEEECCC--Cc-EEEE---ecCCCC--CceEEEECCCCCeEEEEecccc
Confidence 33579999999999999985 499999999875 32 2333 666655 7888999999999999999876
No 113
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=3.4e-28 Score=248.52 Aligned_cols=262 Identities=13% Similarity=0.100 Sum_probs=217.8
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEECCCCeEeEEEeecCCceE
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDMRRLNIKSSTAVTSGTCW 115 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~ 115 (708)
.++++++.|+.|++||+.+++.+. .+.+|. .+.+++|+ +++| ++++.|+.|++||+.+++.+..+..+. .+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~-~~~~~~---~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~ 77 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTA-TIPVGS---NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQ 77 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEE-EEECSS---SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEE-EeecCC---CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Ccc
Confidence 467888899999999999988776 777665 58999999 7766 677799999999999999998888665 899
Q ss_pred EEEEecCCCEEEEEe-CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEE-EEecCC-eEEEEEcCCCceEEEE
Q psy12614 116 CLSVHKKKRLLAAGT-EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYL-VTGCAA-AVRVWDIHKGHAIHKM 192 (708)
Q Consensus 116 ~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l-~~~~~d-~i~iwd~~~~~~~~~~ 192 (708)
+++|+|++++|++++ .++.|++||+.+++.. ..+.. ...+.+++|+|++++| ++++.+ .|++||+.+++.+..+
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~--~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 154 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA--GTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV 154 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEE--EEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEE--EEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 999999999886555 5799999999999876 34443 4568999999999988 677777 9999999999988777
Q ss_pred EecccCCCCCceeEEEEEEccCCE-E-EEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEe---cCCe
Q psy12614 193 SLDKSSKFSKNTAVWCVAFCADFT-I-ITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG---VDPT 267 (708)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~ 267 (708)
.. ...+.+++|+|+++ + ++++.++.|++||+++++.+..+. +...+.+++|+|++++|++++ .++.
T Consensus 155 ~~--------~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~ 225 (391)
T 1l0q_A 155 SV--------GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNT 225 (391)
T ss_dssp EC--------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCE
T ss_pred ec--------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCc
Confidence 64 34468999999995 4 677889999999999998887776 556889999999999999888 6899
Q ss_pred EEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEE-EEEcCCCeEEEEeCCCCce
Q psy12614 268 VVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRL-YSGGLDSYLSLSYYPPKTL 334 (708)
Q Consensus 268 i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l-~s~~~d~~i~iw~~~~~~~ 334 (708)
|++||+.+ ++ ....+..|. .+.+++|+ ++.+ ++++.|+.|++||+.+..+
T Consensus 226 v~~~d~~~--------~~--------~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 226 VSMIDTGT--------NK--------ITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp EEEEETTT--------TE--------EEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEECCC--------Ce--------EEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcE
Confidence 99999988 54 445555543 57889998 6666 6778999999999998763
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.98 E-value=1.5e-30 Score=268.51 Aligned_cols=243 Identities=13% Similarity=0.210 Sum_probs=211.3
Q ss_pred eccCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEeCCC----------CCeEEEEEecCCCCCcEEEEEEe--CC-EEEE
Q psy12614 21 FYAPEPKVINCIACEPK-SSRLAVSRADQSIEIWDISE----------TPHVDRVFIGDPLSNSIECLTWF--ND-RLFS 86 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~-~~~la~~~~dg~v~iwd~~~----------~~~~~~~~~~h~~~~~v~~l~~~--~~-~l~s 86 (708)
...+|.+.|++++|+|+ +.+||+|+.||.|+|||+.+ ...+. .+.+|. ..|.+++|+ +. +|++
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~-~~~~h~--~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDL-RLRGHQ--KEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSE-EEECCS--SCCCCEEECTTSTTEEEE
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcE-EecCCC--CCeEEEEeCCCCCCeEEE
Confidence 34679999999999997 78999999999999999986 44444 888999 999999999 55 9999
Q ss_pred EcCCCcEEEEECCCCeE-------eEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCC---cEEEEEeccccc
Q psy12614 87 GGLQGFVNEYDMRRLNI-------KSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDE---GLLYEKLLDRQQ 155 (708)
Q Consensus 87 ~~~d~~i~vwd~~~~~~-------~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~---~~~~~~~~~~~~ 155 (708)
++.||.|++||+.++.. ...+.+|...|.+++|+| ++.+|++++.|+.|++||+.++ ... ..+..|.
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~--~~~~~~~ 277 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPS--HTVDAHT 277 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCS--EEEECCS
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcce--eEeecCC
Confidence 99999999999988432 456778999999999999 6789999999999999999976 333 4566899
Q ss_pred ccEEEEEECCCCC-EEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEe
Q psy12614 156 GRILCTAWHSSGD-YLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWD 230 (708)
Q Consensus 156 ~~v~~~~~s~d~~-~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd 230 (708)
..|.+++|+|++. +|++++.| .|++||+++ +..+..+.. |...|.+++|+|++. +++++.||.|++||
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~-------h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 350 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC-------CSSCEEEEEECSSCTTEEEEEETTSCCEEEE
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec-------CCCCEEEEEECCCCCCEEEEEeCCCcEEEEe
Confidence 9999999999997 68899999 999999998 455666653 378999999999983 88999999999999
Q ss_pred CCC--------------CeeEEEeeccccCeEEEEEeCCCC-EEEEEecCCeEEEEEccC
Q psy12614 231 GKT--------------GVQWSDVKTHKKDILALTVSEDEN-YLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 231 ~~~--------------~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~ 275 (708)
+.. .+.+..+.+|...|.+++|+|+++ +|++++.||.|++|++..
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 351 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp GGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 976 366777888999999999999998 899999999999999976
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.2e-29 Score=254.34 Aligned_cols=287 Identities=12% Similarity=0.081 Sum_probs=206.4
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEE
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYD 97 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd 97 (708)
.+..|.+.|++++|+|||++||+|+.+| ++|||..+++... .. +. ..+..+++. ++.+ ++++.|++|++||
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~-~~--~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIM-SQ--EM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEE-EE--EC--SCCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceee-ee--ec--CCeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 4578999999999999999999998774 8899998866543 22 22 235566666 6666 5678889999999
Q ss_pred CCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCC-cEEEEEecccccccEEEEEECCCCCEEEE--ec
Q psy12614 98 MRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE-GLLYEKLLDRQQGRILCTAWHSSGDYLVT--GC 174 (708)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~--~~ 174 (708)
+.+++++..+. +...|.+++|+++. ++++ .++.|++||+.++ +.+ ..+.. ....+++++ .++++ ++
T Consensus 88 ~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~--~~~~~---~~~~~~~s~--~~la~~sg~ 156 (355)
T 3vu4_A 88 DVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRI--TDDIR---FGGVCEFSN--GLLVYSNEF 156 (355)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBS--SCCEE---EEEEEEEET--TEEEEEESS
T ss_pred CCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceee--EEecc---CCceEEEEc--cEEEEeCCC
Confidence 99999998887 56799999999874 4443 4789999999987 443 33332 444566777 66766 46
Q ss_pred CC-eEEEEEcCCCce----------------EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCc-EEEEeCCCCe
Q psy12614 175 AA-AVRVWDIHKGHA----------------IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGF-VRFWDGKTGV 235 (708)
Q Consensus 175 ~d-~i~iwd~~~~~~----------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~-i~~wd~~~~~ 235 (708)
.+ .|++||+.++.. +..+. +|...|.+++|+|+|+ +++++.||+ |++||+++++
T Consensus 157 ~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-------~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 157 NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-------AHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp CTTCEEEEECCC------------------CCEEEC-------CCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC
T ss_pred cCcEEEEEECCCCCccccccccccccccCcccEEEE-------ccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 67 999999988651 33333 4589999999999995 999999998 9999999999
Q ss_pred eEEEee-c-cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccC--CC---CCCCCcce--EEeEEEeccccceE
Q psy12614 236 QWSDVK-T-HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCST--SG---PEQGSSVW--VRSVNRVIHEGDVK 306 (708)
Q Consensus 236 ~~~~~~-~-~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--~g---~~~~~~~~--~~~~~~~~~~~~v~ 306 (708)
.+..+. + |...|.+++|+|++++|++++.|+.|++||+......... .+ .......| ........+.....
T Consensus 230 ~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 3vu4_A 230 LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGC 309 (355)
T ss_dssp EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCC
T ss_pred EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCce
Confidence 999998 5 9999999999999999999999999999999861100000 00 00000000 00000111222346
Q ss_pred EEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 307 SLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 307 ~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
.++|+ ++.+++++.||.+++|++..
T Consensus 310 ~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 310 KIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 67888 77899999999999998753
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1.8e-28 Score=254.36 Aligned_cols=274 Identities=12% Similarity=0.079 Sum_probs=230.7
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEE----EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDR----VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR 100 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~----~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~ 100 (708)
..+.+++|+|++.++++++.++.|++||+.+++.... .+.+|. ..|.+++|+ +..+++++.|+.|++||+.+
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKL--GFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTC--CEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccC--CceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 4566999999878888888889999999999887642 234787 899999998 88899999999999999999
Q ss_pred CeEeEEEeecCCceEEEEEecCCCEEEEEe-CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec-----
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC----- 174 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~----- 174 (708)
++.+..+..|...+.+++|+|+++++++++ .++.|++||+.+++.. ..+.. ...+.+++|+|++++|++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~--~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~ 277 (433)
T 3bws_A 201 LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI--RKTDK-IGLPRGLLLSKDGKELYIAQFSASN 277 (433)
T ss_dssp CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE--EECCC-CSEEEEEEECTTSSEEEEEEEESCT
T ss_pred ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE--EEecC-CCCceEEEEcCCCCEEEEEECCCCc
Confidence 999999999999999999999999886554 7999999999998876 44544 44599999999999999888
Q ss_pred ---CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-E-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeE
Q psy12614 175 ---AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-T-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDIL 248 (708)
Q Consensus 175 ---~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~ 248 (708)
.| .|++||+.+++.+..+.. ...+.+++|+|++ . +++++.++.|++||+.+++.+..+. +...+.
T Consensus 278 ~~~~dg~i~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~ 348 (433)
T 3bws_A 278 QESGGGRLGIYSMDKEKLIDTIGP--------PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPN 348 (433)
T ss_dssp TCSCCEEEEEEETTTTEEEEEEEE--------EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEE
T ss_pred cccCCCeEEEEECCCCcEEeeccC--------CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCC
Confidence 47 999999999988776633 4578899999999 4 5677899999999999998888776 678899
Q ss_pred EEEEeCCCCEEEEEec---------------CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--
Q psy12614 249 ALTVSEDENYLYCAGV---------------DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-- 311 (708)
Q Consensus 249 ~~~~s~~~~~l~~~~~---------------dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-- 311 (708)
+++|+|++++|++++. ||.|++||..+ ++ ....+.. ...+.+++|+
T Consensus 349 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~--------~~--------~~~~~~~-~~~~~~~~~s~d 411 (433)
T 3bws_A 349 TIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT--------DT--------VKEFWEA-GNQPTGLDVSPD 411 (433)
T ss_dssp EEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT--------TE--------EEEEEEC-SSSEEEEEECTT
T ss_pred eEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC--------Cc--------EEEEecC-CCCCceEEEcCC
Confidence 9999999999998876 57999999988 64 3444444 5678999998
Q ss_pred CCEEEEEcC-CCeEEEEeCCC
Q psy12614 312 GNRLYSGGL-DSYLSLSYYPP 331 (708)
Q Consensus 312 ~~~l~s~~~-d~~i~iw~~~~ 331 (708)
+++|++++. |+.|++|++++
T Consensus 412 g~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 412 NRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SCEEEEEETTTTEEEEEEETT
T ss_pred CCEEEEEECCCCeEEEEEecC
Confidence 778887764 99999999863
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1e-28 Score=247.47 Aligned_cols=308 Identities=10% Similarity=0.030 Sum_probs=215.0
Q ss_pred EEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEE-E
Q psy12614 52 IWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLA-A 128 (708)
Q Consensus 52 iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la-~ 128 (708)
||++.+...+. .+.+|. ..|.+++|+ +++|++|+.++ +++||+++++....... ..+..+++.++++.++ +
T Consensus 3 i~s~~~~~~~~-~~~~h~--~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 76 (355)
T 3vu4_A 3 LGSMITRNPIV-PENHVS--NPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFV 76 (355)
T ss_dssp -----------------C--CCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEE
T ss_pred cccccccCCcc-ccccCC--CceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEE
Confidence 56666666554 678898 999999999 88888888765 78999998877655443 3588889999988885 5
Q ss_pred EeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCC-ceEEEEEecccCCCCCceeEE
Q psy12614 129 GTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKG-HAIHKMSLDKSSKFSKNTAVW 207 (708)
Q Consensus 129 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~v~ 207 (708)
++.|+.|++||..+++.+ ..+. +...|.+++|+++. ++++..+.|++||+.++ +.+..+.. ...
T Consensus 77 ~~~d~~v~iWd~~~~~~~--~~~~-~~~~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~~~~~----------~~~ 141 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDV--SRIK-VDAPVKDLFLSREF--IVVSYGDVISVFKFGNPWKRITDDIR----------FGG 141 (355)
T ss_dssp CSSTTEEEEEETTTTEEE--EEEE-CSSCEEEEEECSSE--EEEEETTEEEEEESSTTCCBSSCCEE----------EEE
T ss_pred ECCccEEEEEECCCCcEE--EEEE-CCCceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeEEecc----------CCc
Confidence 677899999999999887 3443 56789999999764 55555459999999988 55544431 334
Q ss_pred EEEEccCCEEEE--EcCCCcEEEEeCCCCe----------------eEEEeeccccCeEEEEEeCCCCEEEEEecCCe-E
Q psy12614 208 CVAFCADFTIIT--GDSGGFVRFWDGKTGV----------------QWSDVKTHKKDILALTVSEDENYLYCAGVDPT-V 268 (708)
Q Consensus 208 ~~~~~~~~~l~~--~~~dg~i~~wd~~~~~----------------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i 268 (708)
.+++++ ..+++ |+.+|.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.|++ |
T Consensus 142 ~~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v 220 (355)
T 3vu4_A 142 VCEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTII 220 (355)
T ss_dssp EEEEET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEE
T ss_pred eEEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEE
Confidence 456666 54554 6889999999998865 26788899999999999999999999999998 9
Q ss_pred EEEEccCCcccccCCCCCCCCcceEEeEEEe-c-cccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCC
Q psy12614 269 VCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-I-HEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQS 344 (708)
Q Consensus 269 ~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~-~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~ 344 (708)
++||+.+ ++ ....+. + |...|.+++|+ +.+|++++.|+.|++||+......... .....
T Consensus 221 ~iwd~~~--------~~--------~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~-~~~~~ 283 (355)
T 3vu4_A 221 RVFKTED--------GV--------LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRH-ALKGW 283 (355)
T ss_dssp EEEETTT--------CC--------EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSE-ETTTT
T ss_pred EEEECCC--------Cc--------EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccc-cccce
Confidence 9999998 76 666776 5 99999999999 899999999999999999765321111 00000
Q ss_pred ceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-C
Q psy12614 345 TPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-E 423 (708)
Q Consensus 345 ~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d 423 (708)
+.|. ..+ ..|. .....+..........++|++||++++++. |
T Consensus 284 ----~~~~------~~~---~~~~------------------------~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~d 326 (355)
T 3vu4_A 284 ----INMK------YFQ---SEWS------------------------LCNFKLSVDKHVRGCKIAWISESSLVVVWPHT 326 (355)
T ss_dssp ----EECC------CCC---CSSC------------------------SEEEECCCCTTCCCCEEEESSSSEEEEEETTT
T ss_pred ----eecc------ccc---cccc------------------------eeEEEeccCCCCCceEEEEeCCCCEEEEEeCC
Confidence 0000 000 0000 011111112233346689999999999965 9
Q ss_pred CceEEEEEEecC
Q psy12614 424 SCVRLHSLDLDG 435 (708)
Q Consensus 424 ~~i~i~~~~~~~ 435 (708)
|.+++|++..++
T Consensus 327 g~~~~~~~~~~~ 338 (355)
T 3vu4_A 327 RMIETFKVVFDD 338 (355)
T ss_dssp TEEEEEEEEEET
T ss_pred CeEEEEEEEcCC
Confidence 999999998744
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.7e-30 Score=255.96 Aligned_cols=264 Identities=8% Similarity=0.040 Sum_probs=205.4
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECC---------CC
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMR---------RL 101 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~---------~~ 101 (708)
...+.+++++||+|+.||.|++||+.+++.+. .+. . ..|.++.|+.. +++++.|++|++|+.. ++
T Consensus 41 ~~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~-~~~--~--~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 41 NKSMYYDKWVCMCRCEDGALHFTQLKDSKTIT-TIT--T--PNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp CSSSSEEEEEEEEEEETTEEEEEEESSSSCEE-EEE--E--ECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred hhhhcCCCCEEEEECCCCcEEEEECCCCcEEE-EEe--c--CCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCc
Confidence 34455788999999999999999999998876 444 3 56777778744 9999999999999665 55
Q ss_pred eEeEEEe-ecCCceEEEEEec--CCCEEEEEeCCCcEEEEEccCCcEEEEEec-ccccccEEEEEECCCCCEEEEecCC-
Q psy12614 102 NIKSSTA-VTSGTCWCLSVHK--KKRLLAAGTEQGHINLFQISDEGLLYEKLL-DRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 102 ~~~~~~~-~~~~~v~~~~~s~--~~~~la~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
+.+..+. .|.+.|.+++|+| +++++++++.||.|++||+++++.. ... ..+...+.+++|+|++.+|++|+.|
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~--~~~~~~~~~~i~~~~~~pdg~~lasg~~dg 192 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQY--IVHSAKSDVEYSSGVLHKDSLLLALYSPDG 192 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEE--EEECCCSSCCCCEEEECTTSCEEEEECTTS
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEE--EEEecCCCCceEEEEECCCCCEEEEEcCCC
Confidence 5455544 6778999999999 9999999999999999999998885 333 3456689999999999999999999
Q ss_pred eEEEEEcCCCceE-EEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec---cccCeE--E
Q psy12614 177 AVRVWDIHKGHAI-HKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT---HKKDIL--A 249 (708)
Q Consensus 177 ~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~---~~~~i~--~ 249 (708)
.|++||+++++.+ ..+.. .|...|.+++|+|++. +++++ ++.|++||+++++.+..+.. |...+. +
T Consensus 193 ~i~iwd~~~~~~~~~~~~~------~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 265 (343)
T 3lrv_A 193 ILDVYNLSSPDQASSRFPV------DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVT 265 (343)
T ss_dssp CEEEEESSCTTSCCEECCC------CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEE
T ss_pred EEEEEECCCCCCCccEEec------cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceE
Confidence 9999999999887 55543 1488999999999996 77777 56999999998877655443 334443 6
Q ss_pred EEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-----CCEEEEEcCCCe
Q psy12614 250 LTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-----GNRLYSGGLDSY 323 (708)
Q Consensus 250 ~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-----~~~l~s~~~d~~ 323 (708)
++|+|++++|++++. |+.+++|++.. +. ..|.. .++..++|. ...+++++.|+.
T Consensus 266 ~~~~~~g~~l~~~s~~d~~i~v~~~~~--------~~----~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~d~~ 325 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNESNSLTIYKFDK--------KT----KNWTK--------DEESALCLQSDTADFTDMDVVCGDGG 325 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECT--------TT----CSEEE--------EEEEECCC----CCCCEEEEEEETTE
T ss_pred EEECCCCCEEEEecCCCCcEEEEEEcc--------cc----cceEe--------cCceeEecCccccccceeEEEecCCc
Confidence 999999999999998 99999999977 32 23432 334444444 356778888888
Q ss_pred EEEEeC
Q psy12614 324 LSLSYY 329 (708)
Q Consensus 324 i~iw~~ 329 (708)
+.++-.
T Consensus 326 ~~~~~~ 331 (343)
T 3lrv_A 326 IAAILK 331 (343)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 877644
No 119
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=2.1e-29 Score=260.07 Aligned_cols=257 Identities=14% Similarity=0.186 Sum_probs=214.0
Q ss_pred eEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCC----------CeEeEEEeecCCceEEEEEecCCC-E
Q psy12614 60 HVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRR----------LNIKSSTAVTSGTCWCLSVHKKKR-L 125 (708)
Q Consensus 60 ~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~----------~~~~~~~~~~~~~v~~~~~s~~~~-~ 125 (708)
.......+|. +.|++++|+ +.+|++++.||.|++||+.+ .+++..+.+|...|.+++|+|++. +
T Consensus 119 ~~~~~~~~h~--~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 196 (430)
T 2xyi_A 119 IEIEIKINHE--GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGY 196 (430)
T ss_dssp EEEEEEEEES--SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTE
T ss_pred eEEEEEEcCC--CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCe
Confidence 3334667888 999999999 46899999999999999987 678888999999999999999998 9
Q ss_pred EEEEeCCCcEEEEEccCCcE-----EEEEecccccccEEEEEECC-CCCEEEEecCC-eEEEEEcCCC---ceEEEEEec
Q psy12614 126 LAAGTEQGHINLFQISDEGL-----LYEKLLDRQQGRILCTAWHS-SGDYLVTGCAA-AVRVWDIHKG---HAIHKMSLD 195 (708)
Q Consensus 126 la~~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d-~i~iwd~~~~---~~~~~~~~~ 195 (708)
|++|+.||.|++||+..+.. .....+.+|...|.+++|+| ++.+|++++.+ .|++||++++ +.+..+.
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-- 274 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-- 274 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE--
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee--
Confidence 99999999999999987321 11245668999999999999 67899999999 9999999987 4555554
Q ss_pred ccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCC-CeeEEEeeccccCeEEEEEeCCCC-EEEEEecCCeEEEE
Q psy12614 196 KSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKT-GVQWSDVKTHKKDILALTVSEDEN-YLYCAGVDPTVVCF 271 (708)
Q Consensus 196 ~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~-~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw 271 (708)
.+...|.+++|+|++. +++|+.||.|++||+++ +..+..+..|...|.+++|+|+++ +|++++.|+.|++|
T Consensus 275 -----~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iw 349 (430)
T 2xyi_A 275 -----AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 349 (430)
T ss_dssp -----CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEE
T ss_pred -----cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEE
Confidence 2378899999999884 78999999999999998 567888889999999999999985 68999999999999
Q ss_pred EccCCcccccCCCCCCCC------cceEEeEEEeccccceEEEEEe--CC-EEEEEcCCCeEEEEeCCCCc
Q psy12614 272 QRTRKPQVCSTSGPEQGS------SVWVRSVNRVIHEGDVKSLALH--GN-RLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 272 ~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~v~~l~~~--~~-~l~s~~~d~~i~iw~~~~~~ 333 (708)
|+.. ...... ..........+|...|.+++|+ +. ++++++.|+.|++|++....
T Consensus 350 d~~~--------~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 350 DLSK--------IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp EGGG--------TTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred eCCC--------CccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 9986 210000 0011456677899999999999 55 89999999999999997654
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=4.9e-28 Score=251.08 Aligned_cols=316 Identities=9% Similarity=0.044 Sum_probs=245.4
Q ss_pred CCCcEEEEE---EcCCCCEEEEEe--------------CCC--cEEEEeCCCCCe-EEEEEecCCCCCcEEEEEEe--CC
Q psy12614 25 EPKVINCIA---CEPKSSRLAVSR--------------ADQ--SIEIWDISETPH-VDRVFIGDPLSNSIECLTWF--ND 82 (708)
Q Consensus 25 h~~~v~~~~---~s~~~~~la~~~--------------~dg--~v~iwd~~~~~~-~~~~~~~h~~~~~v~~l~~~--~~ 82 (708)
....+..++ |+|+++.+++.+ .++ .|.+||..++.. ....+..+ ..+.+++|+ +.
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~~~~ 135 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG---FQPKSVRFIDNTR 135 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS---SCBCCCEESSSSE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC---CCceEEEEeCCCe
Confidence 456678888 899887766542 223 344444443422 22245444 456689999 55
Q ss_pred EEEEEcCCCcEEEEECCCCeEeE-----EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc
Q psy12614 83 RLFSGGLQGFVNEYDMRRLNIKS-----STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR 157 (708)
Q Consensus 83 ~l~s~~~d~~i~vwd~~~~~~~~-----~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 157 (708)
.+++++.++.|++||+.+++... .+.+|.+.|.+++|+|+++++++++.|+.|++||+.+++.. ..+..|...
T Consensus 136 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~--~~~~~~~~~ 213 (433)
T 3bws_A 136 LAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK--ATVDLTGKW 213 (433)
T ss_dssp EEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE--EEEECSSSS
T ss_pred EEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE--EEEcCCCCC
Confidence 66677788999999999998877 34478889999999999999999999999999999998877 566678889
Q ss_pred EEEEEECCCCCEEEEe-cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc--------CCCcE
Q psy12614 158 ILCTAWHSSGDYLVTG-CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD--------SGGFV 226 (708)
Q Consensus 158 v~~~~~s~d~~~l~~~-~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~--------~dg~i 226 (708)
+.+++|+|++++++++ +.+ .|++||+.+++.+..+.. ...+.+++|+|+++ +++++ .||.|
T Consensus 214 ~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i 285 (433)
T 3bws_A 214 SKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK--------IGLPRGLLLSKDGKELYIAQFSASNQESGGGRL 285 (433)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC--------CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEE
T ss_pred eeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC--------CCCceEEEEcCCCCEEEEEECCCCccccCCCeE
Confidence 9999999999988554 467 999999999988776643 45589999999995 66666 58899
Q ss_pred EEEeCCCCeeEEEeeccccCeEEEEEeCCCCEE-EEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccce
Q psy12614 227 RFWDGKTGVQWSDVKTHKKDILALTVSEDENYL-YCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDV 305 (708)
Q Consensus 227 ~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v 305 (708)
++||+.+++.+..+. +...+.+++|+|+++.+ ++++.++.|++||+.+ ++ ....+ .+...+
T Consensus 286 ~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~--------~~--------~~~~~-~~~~~~ 347 (433)
T 3bws_A 286 GIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE--------KK--------VQKSI-PVFDKP 347 (433)
T ss_dssp EEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTT--------TE--------EEEEE-ECSSSE
T ss_pred EEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCC--------Cc--------EEEEe-cCCCCC
Confidence 999999998877664 56789999999999765 5568899999999988 54 33333 467789
Q ss_pred EEEEEe--CCEEEEEcC---------------CCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE--cCCeEEE
Q psy12614 306 KSLALH--GNRLYSGGL---------------DSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ--YTSHLEL 366 (708)
Q Consensus 306 ~~l~~~--~~~l~s~~~---------------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~--~~~~i~i 366 (708)
.+++|+ ++.+++++. ||.|++||+.+............+..++++|+|++++++ .++.|.+
T Consensus 348 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v 427 (433)
T 3bws_A 348 NTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRV 427 (433)
T ss_dssp EEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEE
T ss_pred CeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEE
Confidence 999999 777887776 579999999887744443234456789999999998864 4899999
Q ss_pred EEecC
Q psy12614 367 WSLGS 371 (708)
Q Consensus 367 ~~~~~ 371 (708)
|++..
T Consensus 428 ~~~~~ 432 (433)
T 3bws_A 428 YRRDG 432 (433)
T ss_dssp EEETT
T ss_pred EEecC
Confidence 99863
No 121
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.5e-28 Score=253.83 Aligned_cols=304 Identities=11% Similarity=0.079 Sum_probs=219.0
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe---EeEEEee-------------------------------------
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN---IKSSTAV------------------------------------- 109 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~---~~~~~~~------------------------------------- 109 (708)
.++.+++|+ |++| +++.++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l-~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLV-FAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEE-EEEETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEE-EEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 578899999 6644 45568899999999998 6555543
Q ss_pred -----------------cCCceEEEEEecCCCEE-EEEeCCCcEEEEEcc--CCcEEEEEecccccccEEEEEECCCCCE
Q psy12614 110 -----------------TSGTCWCLSVHKKKRLL-AAGTEQGHINLFQIS--DEGLLYEKLLDRQQGRILCTAWHSSGDY 169 (708)
Q Consensus 110 -----------------~~~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~s~d~~~ 169 (708)
|.+.|++++|+|++++| ++++.||.|++||+. +++.........|...|.+++|+|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 33369999999999996 888899999999999 7776632222356789999999999999
Q ss_pred EEEecCC-eEEEEEcCCCceEE----EEEecccCCCCCceeEEEEEEccC---CE-EEEEcCCCcEEEEeCCCCeeEEE-
Q psy12614 170 LVTGCAA-AVRVWDIHKGHAIH----KMSLDKSSKFSKNTAVWCVAFCAD---FT-IITGDSGGFVRFWDGKTGVQWSD- 239 (708)
Q Consensus 170 l~~~~~d-~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~---~~-l~~~~~dg~i~~wd~~~~~~~~~- 239 (708)
|++++.+ .|++|++.+++... .+. +|...|.+++|+|+ ++ +++++.|+.|++||+.+++.+..
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 236 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPIL-------GHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW 236 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSE-------ECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE
T ss_pred EEEEeCCCcEEEEecCCcccccccceeee-------cccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee
Confidence 9999999 99999998876543 222 33788999999999 85 89999999999999999988877
Q ss_pred eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe----CCEE
Q psy12614 240 VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH----GNRL 315 (708)
Q Consensus 240 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~l 315 (708)
+.+|...|.+++|+ ++++|++++.|+.|++||+.+ ++ ....+..+. .+..+.+. ...+
T Consensus 237 ~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~--------~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~ 298 (450)
T 2vdu_B 237 LFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKT--------GK--------NLSTFDYNS-LIKPYLNDQHLAPPRF 298 (450)
T ss_dssp CCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTT--------CC--------EEEEEECHH-HHGGGCCTTSBC----
T ss_pred ecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCC--------Cc--------Eeeeecchh-hhhhhhhhcccccccc
Confidence 66899999999999 999999999999999999998 65 334443221 11111110 0000
Q ss_pred EEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE--cCCeEEEEEe--cCCCCCCCCCCCCCCcccCCCC
Q psy12614 316 YSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ--YTSHLELWSL--GSAQSTDLSSHSNTTGVPLLSF 391 (708)
Q Consensus 316 ~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~--~~~~~~~~~~~~~~~~~~~~~~ 391 (708)
... +. .........++++|++++++++ .++.|.+|++ ..+.
T Consensus 299 ~~~--~~---------------~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~------------------ 343 (450)
T 2vdu_B 299 QNE--NN---------------DIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKG------------------ 343 (450)
T ss_dssp -----------------------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTT------------------
T ss_pred ccc--cc---------------ccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCC------------------
Confidence 000 00 0012234567778888877764 5778888888 3321
Q ss_pred ceEEEEEEecCCCceEEEEeCCCCcEEEEEc-------CCceEEEEEEecCCc
Q psy12614 392 PRLIVKMSAVNNATIRCSVVSNDGKYVAYST-------ESCVRLHSLDLDGDK 437 (708)
Q Consensus 392 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-------d~~i~i~~~~~~~~~ 437 (708)
..........+ ..|.+++|+|++.+++++. +..|.+|.+....+.
T Consensus 344 ~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~ 395 (450)
T 2vdu_B 344 DLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENS 395 (450)
T ss_dssp CEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTE
T ss_pred ceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCe
Confidence 11333333344 8899999999654444433 445899999864443
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=2.3e-27 Score=242.42 Aligned_cols=261 Identities=10% Similarity=0.089 Sum_probs=212.2
Q ss_pred EEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEE-EEEeCCCcEEEEEccCCcEEEEEecccccccEEEE
Q psy12614 83 RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLL-AAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCT 161 (708)
Q Consensus 83 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 161 (708)
.+++++.|+.|++||+.+++.+..+..|. .+.+++|+|++++| ++++.|+.|++||+.+++.. ..+..+. .+.++
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~--~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI--ATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE--EEEECSS-SEEEE
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE--EEEECCC-Cccce
Confidence 57788999999999999999999888775 58999999999987 56668999999999999886 4444443 89999
Q ss_pred EECCCCCEEEEe-cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E-EEEcCCCcEEEEeCCCCeeE
Q psy12614 162 AWHSSGDYLVTG-CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I-ITGDSGGFVRFWDGKTGVQW 237 (708)
Q Consensus 162 ~~s~d~~~l~~~-~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~i~~wd~~~~~~~ 237 (708)
+|+|++++|+++ +.+ .|++||+.+++.+..+.. ...+.+++|+|+++ + ++++.++.|++||+.+++.+
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT--------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC--------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 999999988654 456 999999999988877753 34679999999995 5 68888999999999999998
Q ss_pred EEeeccccCeEEEEEeCCCCEE-EEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCE
Q psy12614 238 SDVKTHKKDILALTVSEDENYL-YCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNR 314 (708)
Q Consensus 238 ~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~ 314 (708)
..+..+ ..+.+++|+|++++| ++++.++.|++||+.+ ++ ... ...+...+.+++|+ ++.
T Consensus 152 ~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~--------~~--------~~~-~~~~~~~~~~~~~~~~g~~ 213 (391)
T 1l0q_A 152 NTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVT--------NS--------VID-TVKVEAAPSGIAVNPEGTK 213 (391)
T ss_dssp EEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT--------TE--------EEE-EEECSSEEEEEEECTTSSE
T ss_pred EEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCC--------Ce--------EEE-EEecCCCccceEECCCCCE
Confidence 888755 567999999999988 5677889999999988 53 223 33456678999998 778
Q ss_pred EEEEc---CCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEE-EE-cCCeEEEEEecCCC
Q psy12614 315 LYSGG---LDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVL-LQ-YTSHLELWSLGSAQ 373 (708)
Q Consensus 315 l~s~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~-~~-~~~~i~i~~~~~~~ 373 (708)
+++++ .++.|++||+.+...............++++|+++.++ ++ .++.+++||+.+++
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 88887 68999999998876433332333456789999998774 43 68999999998765
No 123
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-29 Score=279.53 Aligned_cols=253 Identities=13% Similarity=0.181 Sum_probs=213.2
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECC--CCeEeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEE
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMR--RLNIKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHIN 136 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~--~~~~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~ 136 (708)
..+.+|. +.|++++|+ +++|++|+.||+|++||+. +++....+.+|.+.|++++|+|+ +++|++|+.||.|+
T Consensus 3 ~~l~gH~--~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 3 VIANAHN--ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp -----CC--CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eecccCc--ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 3788999 999999999 8999999999999999998 55778889999999999999998 99999999999999
Q ss_pred EEEccCCcEEEEEecccccccEEEEEECCC--CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 137 LFQISDEGLLYEKLLDRQQGRILCTAWHSS--GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 137 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
+||+.+++......+.+|...|.+++|+|+ ++++++++.| .|++||+.++......... .+...|.+++|+|
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~-----~~~~~v~~l~~~p 155 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-----AHAIGVNSASWAP 155 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE-----CCSSCEEEEEECC
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee-----cCCCceEEEEecC
Confidence 999999975555788899999999999999 9999999999 9999999887443333322 4488999999999
Q ss_pred -------------CCE-EEEEcCCCcEEEEeCCCC----eeEEEeeccccCeEEEEEeCC---CCEEEEEecCCeEEEEE
Q psy12614 214 -------------DFT-IITGDSGGFVRFWDGKTG----VQWSDVKTHKKDILALTVSED---ENYLYCAGVDPTVVCFQ 272 (708)
Q Consensus 214 -------------~~~-l~~~~~dg~i~~wd~~~~----~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~iw~ 272 (708)
++. +++|+.||.|++||++++ .....+.+|...|.+++|+|+ +++|++++.||.|++||
T Consensus 156 ~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp CC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred cccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 464 999999999999999877 566778899999999999999 89999999999999999
Q ss_pred ccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 273 RTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 273 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+.+ ++. ...........|...|.+++|+ +.++++++.||.|++|++....
T Consensus 236 ~~~--------~~~---~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 236 QDN--------EQG---PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp ESS--------SSS---CCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred CCC--------CCC---cceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 988 320 0000122334578899999998 8899999999999999998543
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.4e-28 Score=232.50 Aligned_cols=180 Identities=12% Similarity=0.060 Sum_probs=144.5
Q ss_pred CCCcEEEEEC-CCCeEeEEEeecCCceEEEEEec---CCCEEEEEeCCCcEEEEEccCCcEEEEEeccccc---ccEEEE
Q psy12614 89 LQGFVNEYDM-RRLNIKSSTAVTSGTCWCLSVHK---KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQ---GRILCT 161 (708)
Q Consensus 89 ~d~~i~vwd~-~~~~~~~~~~~~~~~v~~~~~s~---~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~ 161 (708)
.|+.|++|++ .+|+.+..+..|...+..++|+| ++.+||+++.|++|+|||+.+++.+ ..+.+|. ..+.++
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l--~tL~g~~~~v~~v~~v 232 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLL--KKMHIDDSYQASVCHK 232 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEE--EEEECCC---CCCEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEE--EEEcCCCcceeeeEEE
Confidence 4789999999 55888899999999999999999 7899999999999999999999987 5666543 467788
Q ss_pred EECCCCCEE------------EEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEE
Q psy12614 162 AWHSSGDYL------------VTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRF 228 (708)
Q Consensus 162 ~~s~d~~~l------------~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~ 228 (708)
+|+|+|+++ ++|+.| +|++||..+++.+..+.... .. ++...+.+..++ ...+++++.|++|++
T Consensus 233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~-p~-Gh~~~~lsg~~s-g~~lASgS~DgTIkI 309 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL-PP-GQAGRFLEGDVK-DHCAAAILTSGTIAI 309 (356)
T ss_dssp EEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC-CT-TCCCCEEEEEEE-TTEEEEEETTSCEEE
T ss_pred EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec-cC-CCcceeEccccC-CCEEEEEcCCCcEEE
Confidence 999999886 567788 99999999999887654211 00 224444444444 225889999999999
Q ss_pred EeCCCCeeEEEeeccccCeE-EEEEeCCCCEEEEEecCCeEEEEEc
Q psy12614 229 WDGKTGVQWSDVKTHKKDIL-ALTVSEDENYLYCAGVDPTVVCFQR 273 (708)
Q Consensus 229 wd~~~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~~dg~i~iw~~ 273 (708)
||+.+++++.++.+|...+. +++|+|||++|++|+.|++|++||+
T Consensus 310 WDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 310 WDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99999999999998887655 5899999999999999999999996
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.3e-28 Score=250.48 Aligned_cols=259 Identities=11% Similarity=0.017 Sum_probs=175.7
Q ss_pred ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE---EecccccccEEEEEECC--------CCCEEEEecCC-
Q psy12614 109 VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE---KLLDRQQGRILCTAWHS--------SGDYLVTGCAA- 176 (708)
Q Consensus 109 ~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~v~~~~~s~--------d~~~l~~~~~d- 176 (708)
.|...+....+++++.+||+++.|++|++||..+++.... ..+.+|.+.|.+++|+| |+++||+++.|
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 4455566667788888999999999999999998876422 34789999999999998 88999999999
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEe--------------
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDV-------------- 240 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~-------------- 240 (708)
+|++||+.++..+..+... ...+.+++|+|++ .+++++.||.|++||+++++.....
T Consensus 167 tv~~Wd~~~~~~~~~~~~~-------~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPL-------SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp EEEEEEEETTEEEEEEEEC-------SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEE
T ss_pred eEEEEECCCCceeeeecCC-------CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEec
Confidence 9999999988877766643 7789999999987 3899999999999999887643322
Q ss_pred -----------eccccCeEEEEEe-CCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEE
Q psy12614 241 -----------KTHKKDILALTVS-EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSL 308 (708)
Q Consensus 241 -----------~~~~~~i~~~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l 308 (708)
.+|...+.++.|+ |+++.|++++.|+.+++||+.. ++ ....+..|...+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~--------~~--------~~~~l~~~~~~~~~~ 303 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA--------NN--------DYNEISDSTMKLGPK 303 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------------------------
T ss_pred ccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc--------CC--------CCceEeeecCccccE
Confidence 3577788899987 7999999999999999999988 54 334445555555444
Q ss_pred EEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEc--CCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCc
Q psy12614 309 ALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAK--DIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTG 385 (708)
Q Consensus 309 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~ 385 (708)
.+....-- .. .........++| ++.+++++ .++.|++||..++.
T Consensus 304 ~~~~~~~~--------------------~~-~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~------------ 350 (393)
T 4gq1_A 304 NLLPNVQG--------------------IS-LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKD------------ 350 (393)
T ss_dssp CCSCSEEE--------------------EC-SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTT------------
T ss_pred EEcccccc--------------------cc-ccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCc------------
Confidence 43311110 00 011112222332 33445554 57888999888765
Q ss_pred ccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEE
Q psy12614 386 VPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLD 432 (708)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~ 432 (708)
.. .....+...|.+++|+|||++||++.++.+.+|.+.
T Consensus 351 --------~~-~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 351 --------SN-SIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp --------CC-EEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred --------EE-EEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 22 233467789999999999999999888888888875
No 126
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=5.6e-29 Score=253.18 Aligned_cols=241 Identities=12% Similarity=0.040 Sum_probs=178.2
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEE----EEecCCCCCcEEEEEEe----------CCEEEEEcCC
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDR----VFIGDPLSNSIECLTWF----------NDRLFSGGLQ 90 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~----~~~~h~~~~~v~~l~~~----------~~~l~s~~~d 90 (708)
|...+....+++++++||+|+.|++|+|||..++..... .+.||. +.|.+++|+ +++||+++.|
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~--~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHH--NFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCS--SCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCC--CceEEEEEccccccccCCCCCEEEEEECC
Confidence 334444455556777899999999999999998765432 367899 999999996 5699999999
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEE---------------------
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYE--------------------- 148 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~--------------------- 148 (708)
++|++||+.++.++..+..|...|.+++|+|++. +|++++.|++|++||+.+++....
T Consensus 166 ~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~ 245 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLV 245 (393)
T ss_dssp SEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC
T ss_pred CeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccce
Confidence 9999999999999999999999999999999875 799999999999999987754311
Q ss_pred --EecccccccEEEEEEC-CCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEE----------------
Q psy12614 149 --KLLDRQQGRILCTAWH-SSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWC---------------- 208 (708)
Q Consensus 149 --~~~~~~~~~v~~~~~s-~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~---------------- 208 (708)
....+|...+.++.|+ ||++.|++++.| .+++||+..++....+... ...+..
T Consensus 246 ~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
T 4gq1_A 246 NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDS-------TMKLGPKNLLPNVQGISLFPSL 318 (393)
T ss_dssp ------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------------CCSCSEEEECSSCCS
T ss_pred eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeee-------cCccccEEEccccccccccCcc
Confidence 1123567788899986 899999999999 9999999887766555432 222222
Q ss_pred --EEEcc--CCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 209 --VAFCA--DFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 209 --~~~~~--~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
..|.| ++. +++|+.||.|++||..+++....+..|...|.+++|+|||++||+++.+| +.+|.+..
T Consensus 319 ~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 319 LGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp SCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred eeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 23333 334 56788899999999999998888888999999999999999999998665 66666543
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=3.3e-27 Score=223.24 Aligned_cols=270 Identities=10% Similarity=0.061 Sum_probs=185.7
Q ss_pred EEEEEEcCCCC---EEEEEeCCCcEEEEeCCCC---CeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCC---cEEEE
Q psy12614 29 INCIACEPKSS---RLAVSRADQSIEIWDISET---PHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQG---FVNEY 96 (708)
Q Consensus 29 v~~~~~s~~~~---~la~~~~dg~v~iwd~~~~---~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~---~i~vw 96 (708)
+.++-|-..|- .++++++. .|++|+..++ +.+ .++.+|. .+|..+++. .+.+.++-..= .|+.-
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~-~v~lw~~~~~~~~~~~-~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sl 117 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACED-VVSLWKALDAWQWEKL-YTWHFAE--VPVLQIVPVPDVYNLVCVALGNLEIREIRAL 117 (356)
T ss_dssp EEEEEEC----CEEEEEEEESS-EEEEEEESSSSBEEEE-EEEECCS--SCEEEECCCTTCCSCEEEEECSSSEEEEEEE
T ss_pred EeeeeeccCCCCccEEEEeccc-eEEEcccCCCccceee-EEEeccC--ceeEEEEEcCcccceeeeeeccccccceEEE
Confidence 44555544332 57778865 9999999998 444 4999999 999999998 23332221111 11111
Q ss_pred ECCCC----eEeEEEeecCCceEEEEEecCCCEEEEEe--CCCcEEEEEcc-CCcEEEEEecccccccEEEEEECC---C
Q psy12614 97 DMRRL----NIKSSTAVTSGTCWCLSVHKKKRLLAAGT--EQGHINLFQIS-DEGLLYEKLLDRQQGRILCTAWHS---S 166 (708)
Q Consensus 97 d~~~~----~~~~~~~~~~~~v~~~~~s~~~~~la~~~--~d~~i~iwd~~-~~~~~~~~~~~~~~~~v~~~~~s~---d 166 (708)
-+... .....-.+|...|+.+ ++++++.+++ .|+.|++|++. +++.+ ..+..|...+..++|+| +
T Consensus 118 a~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~--~s~~~~~~~v~~l~fs~~~g~ 192 (356)
T 2w18_A 118 FCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGK--ENQFLMPPEETILTFAEVQGM 192 (356)
T ss_dssp CC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEE--EEEEECCCSSCEEEEEEEETS
T ss_pred EECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCcee--eeeccCCCceeeEEeeccCCC
Confidence 11111 1111112333344443 4554444433 48889999984 46665 56667888888888888 7
Q ss_pred CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E------------EEEcCCCcEEEEeCC
Q psy12614 167 GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I------------ITGDSGGFVRFWDGK 232 (708)
Q Consensus 167 ~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l------------~~~~~dg~i~~wd~~ 232 (708)
+.+|++++.| +|++||+.+|+.++++..++ .+...+.+++|+|+|. + ++|+.|++|++||..
T Consensus 193 ~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~----~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 193 QEALLGTTIMNNIVIWNLKTGQLLKKMHIDD----SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCC-------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred CceEEEecCCCcEEEEECCCCcEEEEEcCCC----cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 7999999999 99999999999999987432 2245688889999996 3 457789999999999
Q ss_pred CCeeEEEe-----eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE-
Q psy12614 233 TGVQWSDV-----KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK- 306 (708)
Q Consensus 233 ~~~~~~~~-----~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~- 306 (708)
+++.+..+ .+|...+.+..++ +.++++++.|++|++||+.+ |+ ....+.+|...+.
T Consensus 269 tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~t--------Gk--------~l~tL~gH~~~vvs 330 (356)
T 2w18_A 269 TTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLL--------GQ--------CTALLPPVSDQHWS 330 (356)
T ss_dssp TTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTT--------CS--------EEEEECCC--CCCC
T ss_pred CCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCC--------Cc--------EEEEecCCCCCeEE
Confidence 99887765 3666655544444 78999999999999999999 87 7788888887765
Q ss_pred EEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 307 SLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 307 ~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
.++|+ +++|++|+.|++|++||+
T Consensus 331 ~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 331 FVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEECCCCCEEEEEECCCcEEEecC
Confidence 58999 889999999999999986
No 128
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.3e-28 Score=242.32 Aligned_cols=259 Identities=11% Similarity=0.088 Sum_probs=195.6
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc---------CCcEEEEEec
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS---------DEGLLYEKLL 151 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~---------~~~~~~~~~~ 151 (708)
+.+|++|+.||+|++||+++++.+..+. ...|.+++|+|+ +++++.|+.|++|+.. +++... ...
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~-~~~ 121 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLR-EIE 121 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEE-EEE
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeE-Eee
Confidence 7889999999999999999999888877 366888899998 9999999999999765 444332 233
Q ss_pred ccccccEEEEEECC--CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEE
Q psy12614 152 DRQQGRILCTAWHS--SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVR 227 (708)
Q Consensus 152 ~~~~~~v~~~~~s~--d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~ 227 (708)
.+|.+.|.+++|+| +++++++++.| .|++||+++++........ +...+.+++|+|++. +++|+.||.|+
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~------~~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK------SDVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC------SSCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC------CCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 36678899999999 99999999999 9999999999886555332 255799999999996 88899999999
Q ss_pred EEeCCCCeeE-EEeec-cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccce
Q psy12614 228 FWDGKTGVQW-SDVKT-HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDV 305 (708)
Q Consensus 228 ~wd~~~~~~~-~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v 305 (708)
+||+++++.+ ..+.. |...|.+++|+|++.+|++++ ++.|++||++. ++... ....+..|...+
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~--------~~~~~-----~~~~~~~~~~~~ 261 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRK--------DVGTL-----AYPTYTIPEFKT 261 (343)
T ss_dssp EEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTS--------STTCB-----SSCCCBC-----
T ss_pred EEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCC--------CCcce-----eecccccccccc
Confidence 9999999887 78887 999999999999999999999 55999999988 43000 011111233333
Q ss_pred --EEEEEe--CCEEEEEcC-CCeEEEEeCCCCc--eeecCccCCCCceEEEEc---CCcEEEE-EcCCeEEEEEec
Q psy12614 306 --KSLALH--GNRLYSGGL-DSYLSLSYYPPKT--LVKYPCTLAQSTPVSLAK---DIQHVLL-QYTSHLELWSLG 370 (708)
Q Consensus 306 --~~l~~~--~~~l~s~~~-d~~i~iw~~~~~~--~~~~~~~~~~~~~~~~s~---~~~~l~~-~~~~~i~i~~~~ 370 (708)
.+++|+ +.+|++++. |+.+++|++.... ... .....+.+++ +.+.+++ +.++.+.++-..
T Consensus 262 ~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 262 GTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK-----DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE-----EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe-----cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 468888 889999888 9999999986543 111 1122344555 5555554 466666665433
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=4.1e-27 Score=240.59 Aligned_cols=295 Identities=10% Similarity=0.022 Sum_probs=233.2
Q ss_pred CCcEEEEEEcCCCC-EEEEEe----CCC----cEEEEeC--CCCCeE-EEEEecCCCCCcEEEEEEe-------------
Q psy12614 26 PKVINCIACEPKSS-RLAVSR----ADQ----SIEIWDI--SETPHV-DRVFIGDPLSNSIECLTWF------------- 80 (708)
Q Consensus 26 ~~~v~~~~~s~~~~-~la~~~----~dg----~v~iwd~--~~~~~~-~~~~~~h~~~~~v~~l~~~------------- 80 (708)
...+...+|++.|. ++++|+ .+| .|+|||+ .+++.+ ...+.+|. ..+..+++.
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~g~~ 139 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNK--QWLRYAGHTASDEVFEKLTGIK 139 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECG--GGHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcCh--hHHHHHHHHHHHHHHHHHcCCC
Confidence 34677888888875 566775 467 8999999 888766 24688888 777777665
Q ss_pred ---CCEEEEEcCC------CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCC---cEEEEEccCCcEEEE
Q psy12614 81 ---NDRLFSGGLQ------GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG---HINLFQISDEGLLYE 148 (708)
Q Consensus 81 ---~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~---~i~iwd~~~~~~~~~ 148 (708)
+.+++.++.+ ++|++||+.. .....+..|...+.+++|+|||++||+++.++ .|++||+.+++..
T Consensus 140 ~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-- 216 (415)
T 2hqs_A 140 GAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-- 216 (415)
T ss_dssp CCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE--
T ss_pred CcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE--
Confidence 5677766654 7999999975 55677888999999999999999999999875 9999999998874
Q ss_pred EecccccccEEEEEECCCCCEEE-EecCC---eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC-
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLV-TGCAA---AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS- 222 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~-~~~~d---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~- 222 (708)
.+..|.+.+.+++|+|||++|+ +++.+ .|++||+.+++.. .+. .+...+.+++|+|||+ +++++.
T Consensus 217 -~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~-------~~~~~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 217 -QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVT-------DGRSNNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp -EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECC-------CCSSCEEEEEECTTSSEEEEEECT
T ss_pred -EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCc-------CCCCcccceEECCCCCEEEEEECC
Confidence 4566788899999999999888 55544 5999999988763 332 2367799999999996 666654
Q ss_pred CC--cEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecC---CeEEEEEccCCcccccCCCCCCCCcceEEeEE
Q psy12614 223 GG--FVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD---PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297 (708)
Q Consensus 223 dg--~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~ 297 (708)
++ .|++||+.+++. ..+..+...+.+++|+|||++|++++.+ ..|++||+.+ ++ ...
T Consensus 288 ~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~--------~~---------~~~ 349 (415)
T 2hqs_A 288 AGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT--------GG---------VQV 349 (415)
T ss_dssp TSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT--------CC---------EEE
T ss_pred CCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC--------CC---------EEE
Confidence 44 688889988764 4455577788999999999999988764 5899999998 64 234
Q ss_pred EeccccceEEEEEe--CCEEEEEcCCC---eEEEEeCCCCceeecCccCCCCceEEEEcCC
Q psy12614 298 RVIHEGDVKSLALH--GNRLYSGGLDS---YLSLSYYPPKTLVKYPCTLAQSTPVSLAKDI 353 (708)
Q Consensus 298 ~~~~~~~v~~l~~~--~~~l~s~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~ 353 (708)
+..+. .+.+++|+ ++.|++++.++ .|.+||+.+.....+..+......++|+|..
T Consensus 350 l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 350 LSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp CCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCCC
T ss_pred ecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCcccccc
Confidence 44554 88999999 88888888777 8999999988888887666677888888864
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=9.4e-26 Score=237.37 Aligned_cols=320 Identities=10% Similarity=0.003 Sum_probs=246.4
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEEC--CCCeEeEEEe
Q psy12614 33 ACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDM--RRLNIKSSTA 108 (708)
Q Consensus 33 ~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~--~~~~~~~~~~ 108 (708)
+|+|++.++++++.|++|.+||..+++.+. .+..+. . +..++|+ +++|++++.|++|.+||+ .+++.+..+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~-~i~~g~--~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVK-VIDTGY--A-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEE-EEECST--T-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEE-EEecCc--c-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe
Confidence 489999999999999999999999999876 676444 3 8899999 899999999999999999 8899888887
Q ss_pred ecCCceEEEEEec----CCCEEEEEeC-CCcEEEEEccCCcEEEEEeccc--------cc-ccEEEEEECCCCCEEEE-e
Q psy12614 109 VTSGTCWCLSVHK----KKRLLAAGTE-QGHINLFQISDEGLLYEKLLDR--------QQ-GRILCTAWHSSGDYLVT-G 173 (708)
Q Consensus 109 ~~~~~v~~~~~s~----~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~--------~~-~~v~~~~~s~d~~~l~~-~ 173 (708)
+...+..++|+| ||++|++++. +++|.+||..+++.+......+ |. ..+..+.++|++..++. .
T Consensus 220 -~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 220 -IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp -CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred -cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 456789999999 9999999875 8999999999998873322221 22 37899999998876654 4
Q ss_pred cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EE-EEcCCCcEEEEeCCCCeeEEEeec----cccC
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGFVRFWDGKTGVQWSDVKT----HKKD 246 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~i~~wd~~~~~~~~~~~~----~~~~ 246 (708)
..+ .|.+||+.+++.+....... ...+.+++|+|+|+ ++ ++..++.|.+||..+++++..+.. |.+.
T Consensus 299 ~~~g~i~vvd~~~~~~l~~~~i~~------~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~ 372 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNLTVTSIGA------APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR 372 (543)
T ss_dssp TTTTEEEEEECTTSSSCEEEEEEC------CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTT
T ss_pred CCCCeEEEEEecCCCcceeEEecc------CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCC
Confidence 555 99999998876554222221 45577899999996 44 555689999999999999888764 5444
Q ss_pred eEEEEEeCC-CCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEc---
Q psy12614 247 ILALTVSED-ENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGG--- 319 (708)
Q Consensus 247 i~~~~~s~~-~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~--- 319 (708)
...+ ++|+ +..++++. .|++|.+|+..+ ... ....|.....+..|...+..++++ ++.|++++
T Consensus 373 g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~--------~~~-~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~ 442 (543)
T 1nir_A 373 GANF-VHPKYGPVWSTSHLGDGSISLIGTDP--------KNH-PQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFN 442 (543)
T ss_dssp CEEE-EETTTEEEEEEEBSSSSEEEEEECCT--------TTC-TTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTC
T ss_pred Cccc-CCCCCccEEEeccCCCceEEEEEeCC--------CCC-chhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCC
Confidence 4343 4777 55556654 579999999976 210 112255778888998888999999 88898887
Q ss_pred ----CCCeEEEEeCCCCcee--ec--------CccCCCCceEEEEcCCcEEEEE------cCCeEEEEEecCCC
Q psy12614 320 ----LDSYLSLSYYPPKTLV--KY--------PCTLAQSTPVSLAKDIQHVLLQ------YTSHLELWSLGSAQ 373 (708)
Q Consensus 320 ----~d~~i~iw~~~~~~~~--~~--------~~~~~~~~~~~~s~~~~~l~~~------~~~~i~i~~~~~~~ 373 (708)
.+++|.+||+.+.... .+ .........+.|+|+|+.+.++ .++.|.+||..+.+
T Consensus 443 ~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 443 PDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp SSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 2779999999987632 22 2223345678999999998864 26899999999865
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=1.9e-25 Score=234.98 Aligned_cols=317 Identities=11% Similarity=0.042 Sum_probs=241.0
Q ss_pred Ee--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc--cCCcEEEEEecccc
Q psy12614 79 WF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI--SDEGLLYEKLLDRQ 154 (708)
Q Consensus 79 ~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~--~~~~~~~~~~~~~~ 154 (708)
|+ +..+++++.|++|.+||..+++++.++..+.. +..++|+|||++|++++.|+.|.+||+ .+++.+ ..+. +
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~--~~i~-~ 220 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV--AEIK-I 220 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEE--EEEE-C
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEE--EEEe-c
Confidence 55 67788889999999999999999999884433 899999999999999999999999999 777765 4554 3
Q ss_pred cccEEEEEECC----CCCEEEEecC-C-eEEEEEcCCCceEEEEEecccC----CCCCceeEEEEEEccCC-E-EEEEcC
Q psy12614 155 QGRILCTAWHS----SGDYLVTGCA-A-AVRVWDIHKGHAIHKMSLDKSS----KFSKNTAVWCVAFCADF-T-IITGDS 222 (708)
Q Consensus 155 ~~~v~~~~~s~----d~~~l~~~~~-d-~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~-~-l~~~~~ 222 (708)
...+..++|+| ||++|++++. + +|.+||..+++.+..+...... .|.....+..+.++|++ . +++...
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 45679999999 9999999885 5 9999999999999888753100 00013368899999987 3 678888
Q ss_pred CCcEEEEeCCCCeeEE--EeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe
Q psy12614 223 GGFVRFWDGKTGVQWS--DVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV 299 (708)
Q Consensus 223 dg~i~~wd~~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 299 (708)
++.|.+||..+++.+. .+. +...+..++|+|+|+++++++ .++.|.+||..+ ++ ....+.
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t--------g~--------l~~~i~ 363 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD--------RR--------LSALVD 363 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT--------TE--------EEEEEE
T ss_pred CCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCC--------Ce--------EEEeec
Confidence 9999999998865443 443 566788999999999877665 588999999998 64 334444
Q ss_pred c----cccceEEEEEe--CCEEEEEc-CCCeEEEEeCCC-------Cc-eeecCccCCCCceEEEEcCCcEEEEEc----
Q psy12614 300 I----HEGDVKSLALH--GNRLYSGG-LDSYLSLSYYPP-------KT-LVKYPCTLAQSTPVSLAKDIQHVLLQY---- 360 (708)
Q Consensus 300 ~----~~~~v~~l~~~--~~~l~s~~-~d~~i~iw~~~~-------~~-~~~~~~~~~~~~~~~~s~~~~~l~~~~---- 360 (708)
. |.+....+... +..++++. .|++|.+|++.+ .+ +..+..+......+.++|+++.|.+..
T Consensus 364 ~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~ 443 (543)
T 1nir_A 364 VGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNP 443 (543)
T ss_dssp CSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCS
T ss_pred cCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCC
Confidence 2 54444444322 45566665 589999999987 33 455554445567899999999999964
Q ss_pred ----CCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEE-----EecCCCceEEEEeCCCCcEEEEE------cCCc
Q psy12614 361 ----TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKM-----SAVNNATIRCSVVSNDGKYVAYS------TESC 425 (708)
Q Consensus 361 ----~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~~~s~~g~~l~~~------~d~~ 425 (708)
++.|.+||+.+.+. ....+.+ ...+...+..++|+|+|+.++++ .++.
T Consensus 444 ~~~~~~~v~v~d~~~~~~-----------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~ 506 (543)
T 1nir_A 444 DARISQSVAVFDLKNLDA-----------------KYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSA 506 (543)
T ss_dssp SHHHHTCEEEEETTCTTS-----------------CCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCE
T ss_pred CcccCceEEEEECCCCCC-----------------CeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCe
Confidence 67999999998761 1011111 12446789999999999999964 2699
Q ss_pred eEEEEEEe
Q psy12614 426 VRLHSLDL 433 (708)
Q Consensus 426 i~i~~~~~ 433 (708)
|.|||..+
T Consensus 507 i~v~D~~t 514 (543)
T 1nir_A 507 LVVVDDKT 514 (543)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 99999876
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=4.2e-25 Score=225.70 Aligned_cols=292 Identities=13% Similarity=0.062 Sum_probs=226.9
Q ss_pred CcEEEEEEe---CCEEEEEc----CCC----cEEEEEC--CCCeEe--EEEeecCCceEEEEEec--------------C
Q psy12614 72 NSIECLTWF---NDRLFSGG----LQG----FVNEYDM--RRLNIK--SSTAVTSGTCWCLSVHK--------------K 122 (708)
Q Consensus 72 ~~v~~l~~~---~~~l~s~~----~d~----~i~vwd~--~~~~~~--~~~~~~~~~v~~~~~s~--------------~ 122 (708)
..+...+|. .+.+++|+ .+| +|++||+ .+++++ ..+.+|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 356667776 45666775 567 8999999 998877 55889988888888775 2
Q ss_pred CCEEEEEeCC------CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC----eEEEEEcCCCceEEEE
Q psy12614 123 KRLLAAGTEQ------GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA----AVRVWDIHKGHAIHKM 192 (708)
Q Consensus 123 ~~~la~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d----~i~iwd~~~~~~~~~~ 192 (708)
+..++.++.+ +.|++||+.++.. ..+..|...+.+++|+|||++|++++.+ .|++||+.+++... +
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~---~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l 218 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQ---FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-V 218 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSC---EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-E
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCC---EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-e
Confidence 6677776654 7999999987655 5677788999999999999999998754 89999999988753 3
Q ss_pred EecccCCCCCceeEEEEEEccCCE-EE-EEcCCCc--EEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEec-CC-
Q psy12614 193 SLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGF--VRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGV-DP- 266 (708)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~--i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg- 266 (708)
. .+...+.+++|+|||+ ++ +++.++. |++||+.+++. ..+..|...+.+++|+|||++|++++. ++
T Consensus 219 ~-------~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~ 290 (415)
T 2hqs_A 219 A-------SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGR 290 (415)
T ss_dssp E-------CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred e-------cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCC
Confidence 3 2266899999999996 55 6666654 99999988776 566778889999999999999998876 44
Q ss_pred -eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCC---CeEEEEeCCCCceeecCcc
Q psy12614 267 -TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLD---SYLSLSYYPPKTLVKYPCT 340 (708)
Q Consensus 267 -~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d---~~i~iw~~~~~~~~~~~~~ 340 (708)
.|++||+.+ ++ ...+..+...+.+++|+ +++|++++.+ ..|.+||+.+.....+...
T Consensus 291 ~~i~~~d~~~--------~~---------~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~ 353 (415)
T 2hqs_A 291 PQVYKVNING--------GA---------PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSST 353 (415)
T ss_dssp CEEEEEETTS--------SC---------CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCS
T ss_pred cEEEEEECCC--------CC---------EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCC
Confidence 677888877 53 23445567788899998 8888887764 5899999999887766633
Q ss_pred CCCCceEEEEcCCcEEEEE-cCC---eEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCC
Q psy12614 341 LAQSTPVSLAKDIQHVLLQ-YTS---HLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDG 415 (708)
Q Consensus 341 ~~~~~~~~~s~~~~~l~~~-~~~---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g 415 (708)
.....++|+|+|+.|+++ .++ .|.+|++.... ......+.+.|.+++|+|.-
T Consensus 354 -~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~----------------------~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 354 -FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF----------------------KARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp -SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC----------------------EEECCCSSSEEEEEEECCCC
T ss_pred -CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc----------------------EEEeeCCCCCCcCCcccccc
Confidence 367789999999988874 444 68899987533 33445778899999999964
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=7.3e-25 Score=243.58 Aligned_cols=318 Identities=11% Similarity=0.051 Sum_probs=236.8
Q ss_pred CCcEEEEEEcCCCCEEEEEeC-CC-----cEEEEeCCCCCeEEEEEecCCCC----------------------CcEEEE
Q psy12614 26 PKVINCIACEPKSSRLAVSRA-DQ-----SIEIWDISETPHVDRVFIGDPLS----------------------NSIECL 77 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~-dg-----~v~iwd~~~~~~~~~~~~~h~~~----------------------~~v~~l 77 (708)
...|.+++|||||++||+++. || .|.+||+.+++... .+..+... ..|.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRL-LVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEE-EECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeE-ccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 567999999999999999988 88 89999999988765 55554411 137889
Q ss_pred EEe--CCEEEEEcCCCcEEEEECCCCe--EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccc
Q psy12614 78 TWF--NDRLFSGGLQGFVNEYDMRRLN--IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDR 153 (708)
Q Consensus 78 ~~~--~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~ 153 (708)
+|+ |++|++++. +.|.+||+.++. ....+..|...+.+++|||||++||+++ ++.|++||+.+++.. .....
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~--~~~~~ 190 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQM--QLTAD 190 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEE--ECCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEE--EeccC
Confidence 999 888888876 999999999883 4455677888899999999999999987 468999999988765 33333
Q ss_pred cccc----------------EEEEEECCCCCEEEEecCC----------------------------------eEEEEEc
Q psy12614 154 QQGR----------------ILCTAWHSSGDYLVTGCAA----------------------------------AVRVWDI 183 (708)
Q Consensus 154 ~~~~----------------v~~~~~s~d~~~l~~~~~d----------------------------------~i~iwd~ 183 (708)
+... +..++|||||++|++++.+ .|.+||+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 3322 4789999999999887532 6888999
Q ss_pred CC-CceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc-----CCCcEEEEeCCCCeeEEEeecccc----CeEEEEE
Q psy12614 184 HK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD-----SGGFVRFWDGKTGVQWSDVKTHKK----DILALTV 252 (708)
Q Consensus 184 ~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-----~dg~i~~wd~~~~~~~~~~~~~~~----~i~~~~~ 252 (708)
.+ ++........ .+...+..++| |||+ ++++. .+..|++||+.+++....+..+.. .+..++|
T Consensus 271 ~~~~~~~~~~~~~-----~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 271 AEQAQTQWIDLGK-----EQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRF 344 (741)
T ss_dssp STTCCCEEECCCS-----CSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEE
T ss_pred CCCCceEEecCCC-----CcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEE
Confidence 88 7754432211 23788999999 9996 55443 256899999999988777765543 4568999
Q ss_pred eCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEE-EEe--CCEEE-EEcCCC--eEEE
Q psy12614 253 SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSL-ALH--GNRLY-SGGLDS--YLSL 326 (708)
Q Consensus 253 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l-~~~--~~~l~-s~~~d~--~i~i 326 (708)
+|||+++++++.||.+.+|.+.. .. ....+..|...+..+ .|+ ++.++ +++.++ .+++
T Consensus 345 spdg~~~~~~~~~g~~~l~~~~~--------~~--------~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l 408 (741)
T 2ecf_A 345 LDDGSILWSSERTGFQHLYRIDS--------KG--------KAAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQI 408 (741)
T ss_dssp CTTSCEEEEECTTSSCEEEEECS--------SS--------CEEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEE
T ss_pred CCCCeEEEEecCCCccEEEEEcC--------CC--------CeeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEE
Confidence 99999999999999888887763 11 134556677778877 488 66664 555555 8889
Q ss_pred EeCCC--CceeecCccCCCCceEEEEcCCcEEEEE--cC---CeEEEEEecC
Q psy12614 327 SYYPP--KTLVKYPCTLAQSTPVSLAKDIQHVLLQ--YT---SHLELWSLGS 371 (708)
Q Consensus 327 w~~~~--~~~~~~~~~~~~~~~~~~s~~~~~l~~~--~~---~~i~i~~~~~ 371 (708)
|++.. .....+.. ......++|+|||+.++.. .. ..+.+++...
T Consensus 409 ~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~ 459 (741)
T 2ecf_A 409 YAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANG 459 (741)
T ss_dssp EEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTS
T ss_pred EEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCC
Confidence 98753 33455552 4445689999999998874 22 3578887654
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=4.4e-24 Score=237.34 Aligned_cols=317 Identities=9% Similarity=-0.002 Sum_probs=230.2
Q ss_pred CcEEEEEEe--CCEEEEEcC-CC-----cEEEEECCCCeEeEEEeecCC------------------------ceEEEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGL-QG-----FVNEYDMRRLNIKSSTAVTSG------------------------TCWCLSV 119 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~-d~-----~i~vwd~~~~~~~~~~~~~~~------------------------~v~~~~~ 119 (708)
..+.+++|+ |++|++++. |+ .|.+||+.+++....+..+.. .|.+++|
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 679999999 899999988 88 899999999988777765543 3889999
Q ss_pred ecCCCEEEEEeCCCcEEEEEccCC---cEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecc
Q psy12614 120 HKKKRLLAAGTEQGHINLFQISDE---GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDK 196 (708)
Q Consensus 120 s~~~~~la~~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~ 196 (708)
||||++|++++. +.|++||+.++ +. ..+..+...+..++|||||++|++++.+.|++||+.+++.........
T Consensus 117 SpDg~~l~~~~~-~~i~~~d~~~~~~~~~---~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 117 SPDAQRLLFPLG-GELYLYDLKQEGKAAV---RQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp CTTSSEEEEEET-TEEEEEESSSCSTTSC---CBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCC
T ss_pred CCCCCEEEEEeC-CcEEEEECCCCCcceE---EEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCc
Confidence 999999999886 99999999988 55 467778888999999999999999886699999999877654332210
Q ss_pred cCCC-C--------CceeEEEEEEccCCE-EEEEcCCC---------------------------------cEEEEeCCC
Q psy12614 197 SSKF-S--------KNTAVWCVAFCADFT-IITGDSGG---------------------------------FVRFWDGKT 233 (708)
Q Consensus 197 ~~~~-~--------~~~~v~~~~~~~~~~-l~~~~~dg---------------------------------~i~~wd~~~ 233 (708)
...+ + ....+..++|+|||+ |++++.++ .|++||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 0000 0 000147799999996 77776554 789999988
Q ss_pred -CeeEEEee--ccccCeEEEEEeCCCCEEEEEec-----CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc--
Q psy12614 234 -GVQWSDVK--THKKDILALTVSEDENYLYCAGV-----DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG-- 303 (708)
Q Consensus 234 -~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-- 303 (708)
++...... .|...+..++| |||++|++++. +..|++||+.+ ++ ....+..+..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~--------g~--------~~~~~~~~~~~~ 335 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS--------NQ--------QRVLAHETSPTW 335 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT--------CC--------EEEEEEEECSSC
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC--------Cc--------eEEEEEcCCCCc
Confidence 77655443 37788999999 99999997764 56899999988 65 3333334432
Q ss_pred --ceEEEEEe--CCEEEEEcCCCeEEEEeCC--CCceeecCccCCCCceE-EEEcCCcEEEE-Ec-CC--eEEEEEecCC
Q psy12614 304 --DVKSLALH--GNRLYSGGLDSYLSLSYYP--PKTLVKYPCTLAQSTPV-SLAKDIQHVLL-QY-TS--HLELWSLGSA 372 (708)
Q Consensus 304 --~v~~l~~~--~~~l~s~~~d~~i~iw~~~--~~~~~~~~~~~~~~~~~-~~s~~~~~l~~-~~-~~--~i~i~~~~~~ 372 (708)
.+..++|+ ++++++++.|+.+++|.++ +. ...+.........+ .++|+++.++. +. ++ .+++|++...
T Consensus 336 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 414 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQ 414 (741)
T ss_dssp CCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETT
T ss_pred CCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcC
Confidence 44678888 7788899999977777654 44 55555333333444 59999987765 43 33 7899998642
Q ss_pred CCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE--cC---CceEEEEE
Q psy12614 373 QSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS--TE---SCVRLHSL 431 (708)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~--~d---~~i~i~~~ 431 (708)
. .....+ .. ...+..++|+|||++|++. +. ..+.+++.
T Consensus 415 g-------------------~~~~~l-~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 415 G-------------------GQPQRL-SK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp C-------------------CCCEEC-CC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred C-------------------CCeeec-cc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 2 011112 12 4567899999999999873 22 35666664
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=1.9e-24 Score=239.53 Aligned_cols=226 Identities=8% Similarity=-0.023 Sum_probs=172.9
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCC---cEEEEEEe--CCEEEEEcCC---------Cc
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN---SIECLTWF--NDRLFSGGLQ---------GF 92 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~---~v~~l~~~--~~~l~s~~~d---------~~ 92 (708)
..+.+++|+|||+++++ +.||+|++||+.+++... .+.+|. . .|.+++|+ |++|++++.+ +.
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~-~~~~~~--~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~ 92 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTV-LIEGKK--IESLRAIRYEISPDREYALFSYNVEPIYQHSYTGY 92 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEE-EECTTT--TTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEE-Eecccc--ccccccceEEECCCCCEEEEEecCccceeecceee
Confidence 34678999999998877 689999999999988765 777766 4 49999999 8999988764 78
Q ss_pred EEEEECCCCeEeEEEe---ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccc-------------
Q psy12614 93 VNEYDMRRLNIKSSTA---VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG------------- 156 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~---~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~------------- 156 (708)
|.+||+.+++. ..+. .|...+..++|||||++||+++. +.|++||+.+++.. .....+..
T Consensus 93 i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~--~~~~~~~~~~~~~g~~~~v~~ 168 (723)
T 1xfd_A 93 YVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAI--RVVSTGKEGVIYNGLSDWLYE 168 (723)
T ss_dssp EEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCE--EEECCCBTTTEEEEECCHHHH
T ss_pred EEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceE--EEecCCCCCceECcccceeEE
Confidence 88999999876 3333 34445889999999999999876 78999999988765 33333222
Q ss_pred -----cEEEEEECCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEE
Q psy12614 157 -----RILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFW 229 (708)
Q Consensus 157 -----~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~w 229 (708)
.+.+++|||||++|++++.+ .+.+|++..... .....+..+.|.++|.. ..+..|++|
T Consensus 169 ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~G~~---~~~~~l~~~ 233 (723)
T 1xfd_A 169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG------------SIYPTVKPYHYPKAGSE---NPSISLHVI 233 (723)
T ss_dssp HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS------------SSSCCCEEEECCBTTSC---CCEEEEEEE
T ss_pred EEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCC------------cCCCcceeccCCCCCCC---CCeeEEEEE
Confidence 23789999999999988765 677887643221 11334778888887742 334589999
Q ss_pred eCCCCeeEEEeecc------ccCeEEEEEeCCCCEEEEEecC----CeEEEEEccC
Q psy12614 230 DGKTGVQWSDVKTH------KKDILALTVSEDENYLYCAGVD----PTVVCFQRTR 275 (708)
Q Consensus 230 d~~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~~~~~d----g~i~iw~~~~ 275 (708)
|+.+++....+..+ ...+..++|+|||++|++.... ..|++||+.+
T Consensus 234 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 234 GLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT 289 (723)
T ss_dssp ESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT
T ss_pred ECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC
Confidence 99988865566543 5678999999999988776533 5799999988
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=2.5e-23 Score=229.79 Aligned_cols=341 Identities=15% Similarity=0.080 Sum_probs=220.4
Q ss_pred EEEEEEeCCEEEEEcCCCcEEEEECCCCeEe-EEEeecC-----------------CceEEEEEecCCCEEEEEeCCCcE
Q psy12614 74 IECLTWFNDRLFSGGLQGFVNEYDMRRLNIK-SSTAVTS-----------------GTCWCLSVHKKKRLLAAGTEQGHI 135 (708)
Q Consensus 74 v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~-~~~~~~~-----------------~~v~~~~~s~~~~~la~~~~d~~i 135 (708)
+..+.|.++.+++++.++ | +||+.+++.+ ..+..+. ..|.+++|||| +.++.+. ++.|
T Consensus 28 ~~~~~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i 103 (706)
T 2z3z_A 28 VVGLQWMGDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGL 103 (706)
T ss_dssp CTTCEEETTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEE
T ss_pred CCCCcCcCCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEE
Confidence 445677777788888888 8 9999999873 4444433 46999999999 6666654 5999
Q ss_pred EEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCC-----CceEEEEEecccCC-------CCCc
Q psy12614 136 NLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHK-----GHAIHKMSLDKSSK-------FSKN 203 (708)
Q Consensus 136 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~-----~~~~~~~~~~~~~~-------~~~~ 203 (708)
++||+.+++.. .+..+...+.+++|+|||++|+++....|++||+.+ ++............ -.+.
T Consensus 104 ~~~d~~~~~~~---~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~ 180 (706)
T 2z3z_A 104 VGFDMLARKVT---YLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREF 180 (706)
T ss_dssp EEEETTTTEEE---EEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCT
T ss_pred EEEECCCCceE---EccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhc
Confidence 99999998764 344556778899999999999996444999999998 77654332221000 0000
Q ss_pred eeEEEEEEccCCE-EEEEc---------------------------------CCCcEEEEeCCCCeeEEEee--ccccCe
Q psy12614 204 TAVWCVAFCADFT-IITGD---------------------------------SGGFVRFWDGKTGVQWSDVK--THKKDI 247 (708)
Q Consensus 204 ~~v~~~~~~~~~~-l~~~~---------------------------------~dg~i~~wd~~~~~~~~~~~--~~~~~i 247 (708)
..+.+++|+|||+ |++++ .+..|++||+.+++...... .|...+
T Consensus 181 ~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 260 (706)
T 2z3z_A 181 GIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFL 260 (706)
T ss_dssp TCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEE
T ss_pred CCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeE
Confidence 1147899999996 66665 44679999999887655442 466789
Q ss_pred EEEEEeCCCCEEEEEecCC-----eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCC
Q psy12614 248 LALTVSEDENYLYCAGVDP-----TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDS 322 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~ 322 (708)
..++|+|||++|++++.++ .|++||..+ ++ ....+.. ....
T Consensus 261 ~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~--------g~--------~~~~~~~-----------------~~~~- 306 (706)
T 2z3z_A 261 TNLSWSPDENILYVAEVNRAQNECKVNAYDAET--------GR--------FVRTLFV-----------------ETDK- 306 (706)
T ss_dssp EEEEECTTSSEEEEEEECTTSCEEEEEEEETTT--------CC--------EEEEEEE-----------------EECS-
T ss_pred eeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC--------Cc--------eeeEEEE-----------------ccCC-
Confidence 9999999999999887765 777787776 42 0000000 0000
Q ss_pred eEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecC
Q psy12614 323 YLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVN 402 (708)
Q Consensus 323 ~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (708)
..
T Consensus 307 ------------------------------------------------------------------------------~~ 308 (706)
T 2z3z_A 307 ------------------------------------------------------------------------------HY 308 (706)
T ss_dssp ------------------------------------------------------------------------------SC
T ss_pred ------------------------------------------------------------------------------Ce
Confidence 00
Q ss_pred CCceEEEEeCC--CCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEE-EEEecCCCeEEEEecC-C---
Q psy12614 403 NATIRCSVVSN--DGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTH-VLISADSTLLLAVSLN-G--- 474 (708)
Q Consensus 403 ~~~i~~~~~s~--~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~d~~~l~~~~~d-g--- 474 (708)
...+.+++|+| ||++++++. ++.++||.++.... .+.. +..+.. .+.. ++|+|||+.|++++.+ +
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~--~~~~---l~~~~~--~v~~~~~~spdg~~l~~~~~~~~~~~ 381 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR--LIRQ---VTKGEW--EVTNFAGFDPKGTRLYFESTEASPLE 381 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC--EEEE---CCCSSS--CEEEEEEECTTSSEEEEEESSSCTTC
T ss_pred ECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC--EEEe---cCCCCe--EEEeeeEEcCCCCEEEEEecCCCCce
Confidence 01234578999 999888765 88999999984222 2333 444432 4544 7999999988766554 3
Q ss_pred c-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecC----CeEEEEECCceeeecCCCCCCceEEEE
Q psy12614 475 P-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRK----SHVVIWKNGQHHASLPRYRKPSTAMAI 547 (708)
Q Consensus 475 ~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~v~~l~~ 547 (708)
. ||.++..+.+ ...+. + ...+..++|||||++|+....+ +.|++||+.+....+..+...+....+
T Consensus 382 ~~l~~~d~~~~~-~~~l~----~--~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~~~~~~~~~~~~~~~ 452 (706)
T 2z3z_A 382 RHFYCIDIKGGK-TKDLT----P--ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKNPDTGYAM 452 (706)
T ss_dssp BEEEEEETTCCC-CEESC----C--SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEEEEEECC------CC
T ss_pred EEEEEEEcCCCC-ceecc----C--CCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeEeeccccchhhhcCC
Confidence 2 8877654333 33333 2 4568899999999999877544 569999998543332233333433333
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=1.4e-23 Score=231.66 Aligned_cols=313 Identities=12% Similarity=0.075 Sum_probs=221.3
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeE-EEEEecCCC--------------CCcEEEEEEe-CCEEEEEcCCC
Q psy12614 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHV-DRVFIGDPL--------------SNSIECLTWF-NDRLFSGGLQG 91 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~-~~~~~~h~~--------------~~~v~~l~~~-~~~l~s~~~d~ 91 (708)
.+..+.|. |+.+++++.+| | +||+.+++.+ ...+..+.+ ...|.+++|+ .+.++.+ .++
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~~~-~~~ 101 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVVLF-TQG 101 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEEEE-ETT
T ss_pred cCCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCCCeEEEE-ECC
Confidence 34557777 66777777787 8 9999998873 323332210 0369999999 6555544 469
Q ss_pred cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC-----CcEEEEEeccccccc---------
Q psy12614 92 FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-----EGLLYEKLLDRQQGR--------- 157 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-----~~~~~~~~~~~~~~~--------- 157 (708)
.|++||+.+++... +..+...+.+++|||||++||++ .++.|++||+.+ ++.. .....+...
T Consensus 102 ~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~--~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 102 GLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI--AVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp EEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE--ESCSCCBTTEEESSCCGG
T ss_pred EEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE--EeccCCCCCeEcccchhh
Confidence 99999999987654 44566789999999999999985 679999999998 7764 333333332
Q ss_pred -----EEEEEECCCCCEEEEec---------------------------------CC-eEEEEEcCCCceEEEEEecccC
Q psy12614 158 -----ILCTAWHSSGDYLVTGC---------------------------------AA-AVRVWDIHKGHAIHKMSLDKSS 198 (708)
Q Consensus 158 -----v~~~~~s~d~~~l~~~~---------------------------------~d-~i~iwd~~~~~~~~~~~~~~~~ 198 (708)
+.+++|+|||++|++++ .+ .|.+||+.+++........
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~--- 254 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE--- 254 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS---
T ss_pred hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC---
Confidence 48899999999999887 44 8999999988764332211
Q ss_pred CCCCceeEEEEEEccCCE-EEEEcCCC-----cEEEEeCCCCeeEEEee-c-ccc---CeEEEEEeC--CCCEEEEEecC
Q psy12614 199 KFSKNTAVWCVAFCADFT-IITGDSGG-----FVRFWDGKTGVQWSDVK-T-HKK---DILALTVSE--DENYLYCAGVD 265 (708)
Q Consensus 199 ~~~~~~~v~~~~~~~~~~-l~~~~~dg-----~i~~wd~~~~~~~~~~~-~-~~~---~i~~~~~s~--~~~~l~~~~~d 265 (708)
.+...+.+++|+|||+ +++++.++ .|++||+.+++....+. . +.. .+..++|+| ||+++++++.|
T Consensus 255 --~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~ 332 (706)
T 2z3z_A 255 --PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD 332 (706)
T ss_dssp --CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTT
T ss_pred --CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccC
Confidence 2367899999999996 77766554 89999999984333332 2 222 246789999 99999999999
Q ss_pred CeEEEEEcc-CCcccccCCCCCCCCcceEEeEEEeccccceEE-EEEe--CCEEEEE-cCCC----eEEEEeCCCCceee
Q psy12614 266 PTVVCFQRT-RKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS-LALH--GNRLYSG-GLDS----YLSLSYYPPKTLVK 336 (708)
Q Consensus 266 g~i~iw~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~-l~~~--~~~l~s~-~~d~----~i~iw~~~~~~~~~ 336 (708)
+.+++|.+. . ++ ....+..+...+.. ++|+ ++.|+.+ +.++ .|..|++.+.....
T Consensus 333 g~~~l~~~~~~--------~~--------~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 396 (706)
T 2z3z_A 333 GWNHLYLYDTT--------GR--------LIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKD 396 (706)
T ss_dssp SSCEEEEEETT--------SC--------EEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEE
T ss_pred CccEEEEEECC--------CC--------EEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCcee
Confidence 999999876 3 33 45566677777876 7888 6666554 4444 67777887776665
Q ss_pred cCccCCCCceEEEEcCCcEEEEE-cC----CeEEEEEecC
Q psy12614 337 YPCTLAQSTPVSLAKDIQHVLLQ-YT----SHLELWSLGS 371 (708)
Q Consensus 337 ~~~~~~~~~~~~~s~~~~~l~~~-~~----~~i~i~~~~~ 371 (708)
+. +......++++|||+.++.. .+ ..+.+|+..+
T Consensus 397 l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 397 LT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp SC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred cc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 55 44456689999999988864 32 4699999876
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=2.5e-22 Score=199.78 Aligned_cols=282 Identities=10% Similarity=0.063 Sum_probs=201.1
Q ss_pred EEEcCCCCE-EEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC-CCcEEEEECCCCeE-eEE
Q psy12614 32 IACEPKSSR-LAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL-QGFVNEYDMRRLNI-KSS 106 (708)
Q Consensus 32 ~~~s~~~~~-la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~-d~~i~vwd~~~~~~-~~~ 106 (708)
..|.+++++ +++++.++.|.+||..+++.+. .+..+. ..+ +++|+ ++++++++. ++.|.+||+.+++. ...
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~-~~~~~~--~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~ 78 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILN-QITLGY--DFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVA 78 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEE-EEECCC--CEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceee-eEEccC--Ccc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEe
Confidence 456666666 6667788999999999998876 555555 666 99999 776666655 89999999999987 777
Q ss_pred EeecCCceEEEEEecCCCEEEEEeCCC---cEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEe-cCC-e-EEE
Q psy12614 107 TAVTSGTCWCLSVHKKKRLLAAGTEQG---HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG-CAA-A-VRV 180 (708)
Q Consensus 107 ~~~~~~~v~~~~~s~~~~~la~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~-~~d-~-i~i 180 (708)
+..+..+..+++|+|+|++|+++..++ .|.+||+.+++.. ..+.. .....+++|+|||++|+++ ..+ . |.+
T Consensus 79 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~--~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~ 155 (331)
T 3u4y_A 79 IQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFI--STIPI-PYDAVGIAISPNGNGLILIDRSSANTVRR 155 (331)
T ss_dssp EEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEE--EEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEE
T ss_pred cccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeE--EEEEC-CCCccceEECCCCCEEEEEecCCCceEEE
Confidence 777776666699999999999555543 8999999998876 33433 3456899999999866655 444 7 999
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E-EEEcCCCcEEEEeCCCCee---EEEeeccccCeEEEEEeCC
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I-ITGDSGGFVRFWDGKTGVQ---WSDVKTHKKDILALTVSED 255 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~i~~wd~~~~~~---~~~~~~~~~~i~~~~~s~~ 255 (708)
|++.....+........ .....+..++|+|||+ + +++..++.|.+||+.+++. +..+.. ...+..++|+||
T Consensus 156 ~~~~~~g~~~~~~~~~~---~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spd 231 (331)
T 3u4y_A 156 FKIDADGVLFDTGQEFI---SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRD 231 (331)
T ss_dssp EEECTTCCEEEEEEEEE---CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTT
T ss_pred EEECCCCcEeecCCccc---cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCC
Confidence 99986444322210000 1134578999999995 4 4556789999999999887 777764 467789999999
Q ss_pred CCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc----ccc---eEEEEEe--CCEEEE-EcCCCeE
Q psy12614 256 ENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH----EGD---VKSLALH--GNRLYS-GGLDSYL 324 (708)
Q Consensus 256 ~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~---v~~l~~~--~~~l~s-~~~d~~i 324 (708)
|++|++++ .++.|.+||..+ ++ ......+..+ ... ...++|+ +++|++ +..++.|
T Consensus 232 g~~l~v~~~~~~~i~~~d~~~--------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 297 (331)
T 3u4y_A 232 GSTVYVLTESTVDVFNFNQLS--------GT------LSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISREL 297 (331)
T ss_dssp SSEEEEECSSEEEEEEEETTT--------TE------EEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEE
T ss_pred CCEEEEEEcCCCEEEEEECCC--------Cc------eeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcE
Confidence 99887665 467899999988 53 1112222211 222 2457888 676654 5556799
Q ss_pred EEEeCCCCceeecC
Q psy12614 325 SLSYYPPKTLVKYP 338 (708)
Q Consensus 325 ~iw~~~~~~~~~~~ 338 (708)
.+||+.......+.
T Consensus 298 ~v~d~~~~~~~~~~ 311 (331)
T 3u4y_A 298 KVFTISGKVVGYVA 311 (331)
T ss_dssp EEEETTSCEEEECT
T ss_pred EEEEecCCccccee
Confidence 99999887765554
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=1.1e-23 Score=233.64 Aligned_cols=345 Identities=12% Similarity=0.050 Sum_probs=228.1
Q ss_pred ceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccc---cEEEEEECCCCCEEEEecC---------C-eEE
Q psy12614 113 TCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG---RILCTAWHSSGDYLVTGCA---------A-AVR 179 (708)
Q Consensus 113 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~s~d~~~l~~~~~---------d-~i~ 179 (708)
.+.+++|+|||+++++ +.||.|++||+.+++.. ..+..|.. .|.+++|||||++|++++. + .+.
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~--~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTST--VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCE--EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEE--EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 4678899999998776 78999999999999876 45555554 4899999999999999876 3 688
Q ss_pred EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCe-----------
Q psy12614 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI----------- 247 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i----------- 247 (708)
+||+.+++. ..+.... .+...+..++|+|||+ ++.++. +.|++||+.+++.......+...+
T Consensus 95 ~~d~~~~~~-~~l~~~~----~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ 168 (723)
T 1xfd_A 95 LSKIPHGDP-QSLDPPE----VSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYE 168 (723)
T ss_dssp EEESSSCCC-EECCCTT----CCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHH
T ss_pred EEECCCCce-EeccCCc----cccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEE
Confidence 999998876 3333221 2244578899999996 666654 899999999888766655444433
Q ss_pred -------EEEEEeCCCCEEEEEecC-CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEE
Q psy12614 248 -------LALTVSEDENYLYCAGVD-PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYS 317 (708)
Q Consensus 248 -------~~~~~s~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s 317 (708)
.+++|+|||++|++++.+ +.+.+|++.. .. ..+...+..+.+. |..
T Consensus 169 ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~--------~~-------------~~~~~~~~~~~~~~~G~~--- 224 (723)
T 1xfd_A 169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPT--------YT-------------GSIYPTVKPYHYPKAGSE--- 224 (723)
T ss_dssp HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECC--------CS-------------SSSSCCCEEEECCBTTSC---
T ss_pred EEeccCcceEEECCCCCEEEEEEECCCccceEEeec--------cC-------------CcCCCcceeccCCCCCCC---
Confidence 789999999999988765 4677787754 21 0122345666665 321
Q ss_pred EcCCCeEEEEeCCCCce-eecCcc------CCCCceEEEEcCCcEEEEE-c----CCeEEEEEecCCCCCCCCCCCCCCc
Q psy12614 318 GGLDSYLSLSYYPPKTL-VKYPCT------LAQSTPVSLAKDIQHVLLQ-Y----TSHLELWSLGSAQSTDLSSHSNTTG 385 (708)
Q Consensus 318 ~~~d~~i~iw~~~~~~~-~~~~~~------~~~~~~~~~s~~~~~l~~~-~----~~~i~i~~~~~~~~~~~~~~~~~~~ 385 (708)
..+..|++||+.+... ..+..+ ......++|||||++++.. . +..|.+||+.+++
T Consensus 225 -~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~------------ 291 (723)
T 1xfd_A 225 -NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV------------ 291 (723)
T ss_dssp -CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC------------
T ss_pred -CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc------------
Confidence 3345899999988763 444422 2233569999999988764 2 2468999988765
Q ss_pred ccCCCCceEEEEEEecCCCce----EEEEeCCCCcEEEE--Ec-CC----ceEEEEEE--ecCCcceeEEeecCCccccc
Q psy12614 386 VPLLSFPRLIVKMSAVNNATI----RCSVVSNDGKYVAY--ST-ES----CVRLHSLD--LDGDKPQISRIKNLPAPLFK 452 (708)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~i----~~~~~s~~g~~l~~--~~-d~----~i~i~~~~--~~~~~~~~~~~~~~~~~~~~ 452 (708)
........+...+ ..++|+|||+.|+. +. ++ ...||.++ .+........ +....
T Consensus 292 --------~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~---l~~~~-- 358 (723)
T 1xfd_A 292 --------CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQS---ITSGD-- 358 (723)
T ss_dssp --------EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCB---SCCSS--
T ss_pred --------ceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeE---eecCC--
Confidence 2222222233333 37899999998775 33 66 45555554 2111000111 33211
Q ss_pred ceeE-EEEEecCCCeEEEEecC---Cc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe
Q psy12614 453 SIFT-HVLISADSTLLLAVSLN---GP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD 518 (708)
Q Consensus 453 ~~i~-~~~~s~d~~~l~~~~~d---g~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 518 (708)
..+. .++|+|||+.|+..+.+ +. ||.++.........+.....+ ...+..++|||||++|+...
T Consensus 359 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 359 WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVE--NCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp SCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSS--SCCCCEEEECTTSSEEEEEC
T ss_pred eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccC--CCCeEEEEECCCCCEEEEEc
Confidence 1222 26999999999877665 33 999976532122233221112 45688999999999988754
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=2.3e-21 Score=194.82 Aligned_cols=269 Identities=14% Similarity=0.063 Sum_probs=209.5
Q ss_pred CCcEEEEEEcCCCCEEEEEeC-------CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCCcEEE
Q psy12614 26 PKVINCIACEPKSSRLAVSRA-------DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQGFVNE 95 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~-------dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~v 95 (708)
...+..++|+|++++|++++. ++.|.+||..+++.+. .+... ..+..++|+ +++++ +...++.|.+
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~-~~~~~---~~~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQ-AIHND---LKPFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEE-EEEES---SCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEE-EEecC---CCcceEEECCCCCEEEEEecCCCEEEE
Confidence 456889999999999988774 4689999999998776 44433 347788999 67554 5566899999
Q ss_pred EECCCCeEeEEEeecCCc---------eEEEEEecCCCEEEEEe--CCCcEEEEEccCCcEEEEEecccccccEEEEEEC
Q psy12614 96 YDMRRLNIKSSTAVTSGT---------CWCLSVHKKKRLLAAGT--EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWH 164 (708)
Q Consensus 96 wd~~~~~~~~~~~~~~~~---------v~~~~~s~~~~~la~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 164 (708)
||..+++.+..+..+... +.+++|+|+++++++++ .++.|.+||..+++.. ..+..+...+..++|+
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~s 193 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLK--TAIQNTGKMSTGLALD 193 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEE--EEECCCCTTCCCCEEE
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceE--EEecCCCCccceEEEC
Confidence 999999988888765432 78999999999888776 4788999999999886 4555455567899999
Q ss_pred CCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EE-EEcCCCcEEEEeCCCCeeEEEee
Q psy12614 165 SSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 165 ~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
|++++|++++.+ .|.+||+.+++.+..+...... +...+..++|+|+|+ ++ +...++.|.+||..+++.+..+.
T Consensus 194 ~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 194 SEGKRLYTTNADGELITIDTADNKILSRKKLLDDG---KEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp TTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSS---SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCC---CCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 999999999988 9999999999998888764322 256788999999995 44 44456999999999999888877
Q ss_pred ccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEE
Q psy12614 242 THKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSG 318 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~ 318 (708)
... ...++|+|+++++++++ .++.|.+||..+ ++ ....+.. ...+.+++|+ ++.|+.+
T Consensus 271 ~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~--------~~--------~~~~~~~-~~~~~~~~~s~dg~~l~v~ 331 (353)
T 3vgz_A 271 APE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS--------YK--------VVKTFDT-PTHPNSLALSADGKTLYVS 331 (353)
T ss_dssp CSS--CCCEEEETTTTEEEEEETTTTEEEEEETTT--------TE--------EEEEEEC-CSEEEEEEECTTSCEEEEE
T ss_pred cCC--CceEEECCCCCEEEEEECCCCeEEEEECCC--------Ce--------EEEEEec-CCCCCeEEEcCCCCEEEEE
Confidence 543 25799999999776666 689999999988 54 3333333 3467888998 6766666
Q ss_pred cCCC
Q psy12614 319 GLDS 322 (708)
Q Consensus 319 ~~d~ 322 (708)
..++
T Consensus 332 ~~~~ 335 (353)
T 3vgz_A 332 VKQK 335 (353)
T ss_dssp EECC
T ss_pred Eccc
Confidence 5543
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=2.4e-21 Score=193.76 Aligned_cols=294 Identities=12% Similarity=0.163 Sum_probs=197.7
Q ss_pred CEEE-EEeCCCcEEEEeCC-CCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC-CcEEEEECC--CCe--EeEEEee
Q psy12614 39 SRLA-VSRADQSIEIWDIS-ETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ-GFVNEYDMR--RLN--IKSSTAV 109 (708)
Q Consensus 39 ~~la-~~~~dg~v~iwd~~-~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d-~~i~vwd~~--~~~--~~~~~~~ 109 (708)
++++ +++.++.|.+||+. ++.........+. ..+.+++|+ +++|++++.+ +.|.+|++. +++ .+..+..
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVP--GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECS--SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecC--CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc
Confidence 3444 44779999999996 3433222334566 789999999 8888888876 999999998 554 3344544
Q ss_pred cCCceEEEEEecCCCEEEEEeC-CCcEEEEEccCCcEE-EEEecccccccEEEEEECCCCCEEEEec-CC-eEEEEEcCC
Q psy12614 110 TSGTCWCLSVHKKKRLLAAGTE-QGHINLFQISDEGLL-YEKLLDRQQGRILCTAWHSSGDYLVTGC-AA-AVRVWDIHK 185 (708)
Q Consensus 110 ~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~s~d~~~l~~~~-~d-~i~iwd~~~ 185 (708)
+. .+..++|+|++++|++++. ++.|.+||+..+... ....+.. ...+.+++|+|++++|++++ .+ .|.+||+.+
T Consensus 83 ~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 83 PG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp SS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 43 7899999999998877665 888999999533221 1133333 34588999999999888877 66 999999987
Q ss_pred -CceEEEE--EecccCCCCCceeEEEEEEccCCE-EE-EEcCCCcEEEEeCCC--Cee--EEEee---cc---ccCeEEE
Q psy12614 186 -GHAIHKM--SLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGFVRFWDGKT--GVQ--WSDVK---TH---KKDILAL 250 (708)
Q Consensus 186 -~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~i~~wd~~~--~~~--~~~~~---~~---~~~i~~~ 250 (708)
++..... .... .....+..++|+|+++ ++ ++..++.|.+|++.. ++. ...+. .. ...+..+
T Consensus 161 ~~~~~~~~~~~~~~----~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 161 DGHLVAQDPAEVTT----VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp TSCEEEEEEEEEEC----STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred CCceeeeccccccc----CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence 6543322 1110 1145688899999996 54 555789999999953 432 22222 11 2356789
Q ss_pred EEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEc-CCCeEEE
Q psy12614 251 TVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGG-LDSYLSL 326 (708)
Q Consensus 251 ~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~-~d~~i~i 326 (708)
+|+|++++|+++. .++.|.+|++.. .. ........+..+.. +.+++|+ +++|++++ .++.+.+
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~--------~~----~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v 303 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSE--------DG----SVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISV 303 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECT--------TS----CCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcC--------CC----CceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEE
Confidence 9999999887554 789999999983 11 11223334444443 8889998 77777777 6899999
Q ss_pred EeCC--CCceeecC--ccCCCCceEEEEcCC
Q psy12614 327 SYYP--PKTLVKYP--CTLAQSTPVSLAKDI 353 (708)
Q Consensus 327 w~~~--~~~~~~~~--~~~~~~~~~~~s~~~ 353 (708)
|+++ ++.+..+. .....+..+++.++.
T Consensus 304 ~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~ 334 (343)
T 1ri6_A 304 YEIVGEQGLLHEKGRYAVGQGPMWVVVNAHE 334 (343)
T ss_dssp EEEETTTTEEEEEEEEECSSSCCEEEEEEEC
T ss_pred EEEcCCCceeeEccccccCCCCeeEEEEccc
Confidence 9554 44433222 022345667776654
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=5.9e-21 Score=189.82 Aligned_cols=267 Identities=10% Similarity=0.076 Sum_probs=196.5
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC-CCcEEEEEccCCcE-EEEEecccccccE
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-QGHINLFQISDEGL-LYEKLLDRQQGRI 158 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~-~~~~~~~~~~~~v 158 (708)
+..+++.+.++.|.+||+.+++....+..+...+ +++|+|+|+++++++. ++.|.+||..+++. . ..+..+..+.
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~ 86 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKV--VAIQEGQSSM 86 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEE--EEEEECSSCC
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeE--EecccCCCCc
Confidence 3346788889999999999999988888777777 9999999997777666 88999999999886 4 4555555555
Q ss_pred EEEEECCCCCEEEEecCC----eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EE-EEcCCCc-EEEEeC
Q psy12614 159 LCTAWHSSGDYLVTGCAA----AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGF-VRFWDG 231 (708)
Q Consensus 159 ~~~~~s~d~~~l~~~~~d----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~-i~~wd~ 231 (708)
.+++|+|+|++|+++..+ .|.+||+.+++.+..+... ....+++|+|||+ ++ +...++. |.+|++
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--------~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 87 ADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP--------YDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp CCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC--------TTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred cceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC--------CCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 559999999999976665 7999999999988876543 3458999999995 54 4455688 999998
Q ss_pred CCCeeE----EEeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE
Q psy12614 232 KTGVQW----SDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306 (708)
Q Consensus 232 ~~~~~~----~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~ 306 (708)
.....+ ............++|+|+|+++++++ .++.|.+||+.+ ++. ......+. ....+.
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~--------~~~-----~~~~~~~~-~~~~~~ 224 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN--------PEN-----ITLLNAVG-TNNLPG 224 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS--------TTS-----CEEEEEEE-CSSCCC
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC--------Ccc-----cceeeecc-CCCCCc
Confidence 754332 11223445689999999999766555 588999999988 540 00133333 346678
Q ss_pred EEEEe--CCEEEEEc-CCCeEEEEeCCCCceeec---Cc-------cCCCCceEEEEcCCcEEEEE--cCCeEEEEEecC
Q psy12614 307 SLALH--GNRLYSGG-LDSYLSLSYYPPKTLVKY---PC-------TLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGS 371 (708)
Q Consensus 307 ~l~~~--~~~l~s~~-~d~~i~iw~~~~~~~~~~---~~-------~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~ 371 (708)
.++|+ +++++.+. .++.|.+||+.+..+..+ .. +......++++|+++.++++ .++.+.+|++..
T Consensus 225 ~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 225 TIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp CEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred eEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 88998 77665554 578899999998765211 10 11112447999999988653 456899999986
Q ss_pred C
Q psy12614 372 A 372 (708)
Q Consensus 372 ~ 372 (708)
.
T Consensus 305 ~ 305 (331)
T 3u4y_A 305 K 305 (331)
T ss_dssp C
T ss_pred C
Confidence 3
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=7.2e-21 Score=190.31 Aligned_cols=246 Identities=14% Similarity=0.187 Sum_probs=178.3
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCC-CcEEEEeCC--CCCeEE-EEEecCCCCCcEEEEEEe--CCEEEEEc-CCCcEEEE
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRAD-QSIEIWDIS--ETPHVD-RVFIGDPLSNSIECLTWF--NDRLFSGG-LQGFVNEY 96 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~d-g~v~iwd~~--~~~~~~-~~~~~h~~~~~v~~l~~~--~~~l~s~~-~d~~i~vw 96 (708)
.|...+.+++|+|+|++|++++.+ +.|.+|++. ++.... ..+.. . ..+..++|+ +++|++++ .++.|.+|
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL-P--GSLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-S--SCCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc-C--CCCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 467789999999999999998876 899999998 555432 13333 3 478899999 77776665 58899999
Q ss_pred ECC---CCeEeEEEeecCCceEEEEEecCCCEEEEEe-CCCcEEEEEccC-CcEEEEE--eccc-ccccEEEEEECCCCC
Q psy12614 97 DMR---RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQISD-EGLLYEK--LLDR-QQGRILCTAWHSSGD 168 (708)
Q Consensus 97 d~~---~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~-~~~~~~~--~~~~-~~~~v~~~~~s~d~~ 168 (708)
|+. +++....+..+ ..+.+++|+|+++++++++ .++.|.+||+.+ ++..... .+.. ....+..++|+|+++
T Consensus 112 d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred ECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 994 33444444443 4688999999999888887 799999999987 6554222 2222 235788999999999
Q ss_pred EEEEec-CC-eEEEEEcCC--Cce--EEEEEecccCCCCCceeEEEEEEccCCE-EE-EEcCCCcEEEEeCC--C--Cee
Q psy12614 169 YLVTGC-AA-AVRVWDIHK--GHA--IHKMSLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGFVRFWDGK--T--GVQ 236 (708)
Q Consensus 169 ~l~~~~-~d-~i~iwd~~~--~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~i~~wd~~--~--~~~ 236 (708)
+|++++ .+ .|.+|++.. ++. ..........+ .....+..++|+|+|+ ++ +...++.|.+||+. + .+.
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~ 269 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENF-SDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK 269 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTC-CSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccc-cccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEE
Confidence 876655 56 999999953 443 22222111111 1234677899999995 44 56678999999998 2 344
Q ss_pred EEEeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccC
Q psy12614 237 WSDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTR 275 (708)
Q Consensus 237 ~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~ 275 (708)
+..+..+.. +..++|+|++++|++++ .++.+.+|++..
T Consensus 270 ~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 270 EGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp EEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred eeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 555554444 88999999999998888 579999996653
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=7.5e-22 Score=192.93 Aligned_cols=233 Identities=9% Similarity=0.089 Sum_probs=178.5
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc--CCCcE
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISE-TPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG--LQGFV 93 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~-~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~--~d~~i 93 (708)
...+..|...|.+++|+|+|++||+++ ++.|.+||+.+ ++... ...++. ...+.+++|+ +++|++++ .++..
T Consensus 34 ~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~-~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 34 MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEK-VDTGFA-TICNNDHGISPDGALYAISDKVEFGKS 110 (297)
T ss_dssp EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEE-CCCTTC-CCBCSCCEECTTSSEEEEEECTTTSSC
T ss_pred eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceE-eccccc-cccccceEECCCCCEEEEEEeCCCCcc
Confidence 444566899999999999999999987 78999999998 77654 555553 3788999999 88999888 33455
Q ss_pred EEE--ECCCCeEeEEEeecCCceEEEEEecCCCEEE-EEeCCCcEEEEEcc--CCcEEEEEecccccccEEEEEECCCCC
Q psy12614 94 NEY--DMRRLNIKSSTAVTSGTCWCLSVHKKKRLLA-AGTEQGHINLFQIS--DEGLLYEKLLDRQQGRILCTAWHSSGD 168 (708)
Q Consensus 94 ~vw--d~~~~~~~~~~~~~~~~v~~~~~s~~~~~la-~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~s~d~~ 168 (708)
.+| +..+++ ...+..+ ..+..++|+||+++|+ ++..++.+++|++. +++. ..+..+...+.+++|+|+++
T Consensus 111 ~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~ 185 (297)
T 2ojh_A 111 AIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE---TRLTHGEGRNDGPDYSPDGR 185 (297)
T ss_dssp EEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE---EECCCSSSCEEEEEECTTSS
T ss_pred eEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc---eEcccCCCccccceECCCCC
Confidence 555 555554 3344443 3489999999999887 67789999999864 4444 45667788899999999999
Q ss_pred EEEEecC-C-eEEEEEcC-CCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----------CcEEEEeCCC
Q psy12614 169 YLVTGCA-A-AVRVWDIH-KGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----------GFVRFWDGKT 233 (708)
Q Consensus 169 ~l~~~~~-d-~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----------g~i~~wd~~~ 233 (708)
+|++++. + .+.+|++. .+.....+.. +...+.+++|+|+|+ +++++.+ +.|++||+.+
T Consensus 186 ~l~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 186 WIYFNSSRTGQMQIWRVRVDGSSVERITD-------SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp EEEEEECTTSSCEEEEEETTSSCEEECCC-------CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred EEEEEecCCCCccEEEECCCCCCcEEEec-------CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCC
Confidence 8887664 6 88888876 4555554432 267899999999996 6666554 5699999988
Q ss_pred Cee--EEEeeccccCeEEEEEeCCCCEEEEEecCC
Q psy12614 234 GVQ--WSDVKTHKKDILALTVSEDENYLYCAGVDP 266 (708)
Q Consensus 234 ~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 266 (708)
++. +..+.+|...+.+++|+|++++|++++.+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 259 GNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 765 444557888999999999999999887654
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=2.5e-20 Score=185.88 Aligned_cols=264 Identities=12% Similarity=0.052 Sum_probs=199.1
Q ss_pred CEEEEEcCCCcEEEEECCCCeEeEEEeecCC--ceEEEEEecCCCEEEE-EeCCCcEEEEEccCCcEEEEEeccc---cc
Q psy12614 82 DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSG--TCWCLSVHKKKRLLAA-GTEQGHINLFQISDEGLLYEKLLDR---QQ 155 (708)
Q Consensus 82 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~--~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~~~~~~~~~~~~---~~ 155 (708)
++|++++.++.|.+||+.+++.+..+..... .+..++|+|+++++++ +..++.|.+||+.+++......... +.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4788999999999999999998888764332 5889999999987654 4557899999999988763323222 12
Q ss_pred ccEEEEEECCCCCEEEEec------------CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc
Q psy12614 156 GRILCTAWHSSGDYLVTGC------------AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD 221 (708)
Q Consensus 156 ~~v~~~~~s~d~~~l~~~~------------~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~ 221 (708)
..+..++|+|||++|++++ .+ .|.+||+.+++.+..+... ..+.+++|+|||+ ++++
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--------~~~~~~~~s~dg~~l~~~- 152 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--------RQITMLAWARDGSKLYGL- 152 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--------SSCCCEEECTTSSCEEEE-
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--------CCcceeEECCCCCEEEEe-
Confidence 3567899999999998885 46 9999999998888777542 3467889999996 6666
Q ss_pred CCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCC------------------------eEEEEEccCCc
Q psy12614 222 SGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDP------------------------TVVCFQRTRKP 277 (708)
Q Consensus 222 ~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg------------------------~i~iw~~~~~~ 277 (708)
++.|.+||+.+++.+..+..+.. ...+.|+|+++.++..+..+ .|.+||..+
T Consensus 153 -~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-- 228 (337)
T 1pby_B 153 -GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET-- 228 (337)
T ss_dssp -SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTT--
T ss_pred -CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCC--
Confidence 68999999999988877764431 11337899998776554332 468899888
Q ss_pred ccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcE
Q psy12614 278 QVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQH 355 (708)
Q Consensus 278 ~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 355 (708)
++ . ....+..+...+.+++|+ +++++++ ++.|.+||+.+...............++++|+|+.
T Consensus 229 ------~~------~-~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 293 (337)
T 1pby_B 229 ------GE------M-AMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGST 293 (337)
T ss_dssp ------CC------E-EEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCE
T ss_pred ------CC------c-eEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCE
Confidence 54 1 133345566678889999 7788877 79999999988764433323346678999999998
Q ss_pred EEEE-cCCeEEEEEecCCC
Q psy12614 356 VLLQ-YTSHLELWSLGSAQ 373 (708)
Q Consensus 356 l~~~-~~~~i~i~~~~~~~ 373 (708)
++++ .++.|.+||+.+++
T Consensus 294 l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 294 VWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp EEEESBSSEEEEEETTTCC
T ss_pred EEEEcCCCcEEEEECcCCc
Confidence 7775 77899999998866
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=3.9e-21 Score=187.79 Aligned_cols=248 Identities=13% Similarity=0.157 Sum_probs=188.6
Q ss_pred EeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC-CeEeEEEeec-CCceEEEEE
Q psy12614 44 SRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR-LNIKSSTAVT-SGTCWCLSV 119 (708)
Q Consensus 44 ~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~~-~~~v~~~~~ 119 (708)
++.++.|.+||+.+++.. .+..|. ..|.+++|+ +++|++++ ++.|.+||+.+ ++.......+ ...+.+++|
T Consensus 18 ~~~~~~i~~~d~~~~~~~--~~~~~~--~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMR--VVWQTP--ELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp CCCCEEEEEEETTTTEEE--EEEEES--SCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred CCcceeEEEEeCCCCcee--eeccCC--cceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEE
Confidence 457889999999988764 456677 899999999 88888876 88999999999 8877666655 378899999
Q ss_pred ecCCCEEEEEeC--CCcEEEE--EccCCcEEEEEecccccccEEEEEECCCCCEEE-EecCC-eEEEEEcC--CCceEEE
Q psy12614 120 HKKKRLLAAGTE--QGHINLF--QISDEGLLYEKLLDRQQGRILCTAWHSSGDYLV-TGCAA-AVRVWDIH--KGHAIHK 191 (708)
Q Consensus 120 s~~~~~la~~~~--d~~i~iw--d~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~-~~~~d-~i~iwd~~--~~~~~~~ 191 (708)
+|++++|++++. ++...+| +..++.. ..+..+. .+..++|+||+++|+ +++.+ .+.+|++. +++. ..
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~ 167 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTGGTP---RLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TR 167 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTCCCC---EECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EE
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCCCce---EEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eE
Confidence 999999999983 3445555 5555554 3344333 488999999999887 66677 88888864 3333 33
Q ss_pred EEecccCCCCCceeEEEEEEccCCE-EEEEc-CCCcEEEEeCC-CCeeEEEeeccccCeEEEEEeCCCCEEEEEecC---
Q psy12614 192 MSLDKSSKFSKNTAVWCVAFCADFT-IITGD-SGGFVRFWDGK-TGVQWSDVKTHKKDILALTVSEDENYLYCAGVD--- 265 (708)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~dg~i~~wd~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--- 265 (708)
+. .+...+.+++|+|+|+ +++++ .++.+.+|++. .+..+..+..+...+..++|+|++++|++++.+
T Consensus 168 ~~-------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 240 (297)
T 2ojh_A 168 LT-------HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADV 240 (297)
T ss_dssp CC-------CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTC
T ss_pred cc-------cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCC
Confidence 32 2267789999999996 55444 58899999876 556677777788889999999999999988765
Q ss_pred --------CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCC
Q psy12614 266 --------PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDS 322 (708)
Q Consensus 266 --------g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~ 322 (708)
+.|++||+.+ ++ ......+..|...+..++|+ ++.|++++.+.
T Consensus 241 ~~~~~~~~~~l~~~d~~~--------~~------~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 241 FDHPRDLDVRVQLMDMDG--------GN------VETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CSCCSSEEEEEEEEETTS--------CS------CEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CcccccCceEEEEEecCC--------CC------ceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999987 53 22344455788889999998 78888776654
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=5.6e-20 Score=184.62 Aligned_cols=260 Identities=10% Similarity=0.043 Sum_probs=199.6
Q ss_pred CcEEEEEEe--CCEEEEEcC-------CCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEE-eCCCcEEEEEcc
Q psy12614 72 NSIECLTWF--NDRLFSGGL-------QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG-TEQGHINLFQIS 141 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~-------d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~-~~d~~i~iwd~~ 141 (708)
..+..++|+ ++++++++. ++.|.+||..+++.+..+... ..+..++|+|+|++++++ ..++.|.+||..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 568899999 778887764 568999999999988887754 457889999999966655 447999999999
Q ss_pred CCcEEEEEecccccc---------cEEEEEECCCCCEEEEec--CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEE
Q psy12614 142 DEGLLYEKLLDRQQG---------RILCTAWHSSGDYLVTGC--AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCV 209 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~---------~v~~~~~s~d~~~l~~~~--~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~ 209 (708)
+++... .+..+.. .+.+++|+|+++++++++ .+ .|.+||..+++.+..+... ...+.++
T Consensus 120 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~-------~~~~~~~ 190 (353)
T 3vgz_A 120 TGEVKG--RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT-------GKMSTGL 190 (353)
T ss_dssp TCCEEE--EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC-------CTTCCCC
T ss_pred CCeeEE--EEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC-------CCccceE
Confidence 998863 3333221 278899999999888776 35 8999999999988877522 3346789
Q ss_pred EEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec----cccCeEEEEEeCCCCEEEEEecC-CeEEEEEccCCcccccCC
Q psy12614 210 AFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT----HKKDILALTVSEDENYLYCAGVD-PTVVCFQRTRKPQVCSTS 283 (708)
Q Consensus 210 ~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~ 283 (708)
+|+|+|+ +++++.++.|.+||..+++.+..+.. +...+..++|+|+++++++++.+ +.|.+||..+
T Consensus 191 ~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-------- 262 (353)
T 3vgz_A 191 ALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN-------- 262 (353)
T ss_dssp EEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT--------
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC--------
Confidence 9999995 88888899999999999998877764 45578889999999988777654 8999999988
Q ss_pred CCCCCCcceEEeEEEeccccceEEEEEe--CCEE-EEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE
Q psy12614 284 GPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRL-YSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 284 g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l-~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 359 (708)
++ ....+.... ...++|+ ++.+ ++...++.|.+||..+............+..++++|+|++++++
T Consensus 263 ~~--------~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~ 331 (353)
T 3vgz_A 263 GN--------ILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVS 331 (353)
T ss_dssp CC--------EEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEE
T ss_pred Cc--------EEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEE
Confidence 65 333333322 2567887 6644 45557999999999887754433233456789999999976654
No 148
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=8.1e-22 Score=218.06 Aligned_cols=316 Identities=11% Similarity=0.031 Sum_probs=216.6
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCC---cEEEEEEe--CCEEEEEcC---------CCcEEEE
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN---SIECLTWF--NDRLFSGGL---------QGFVNEY 96 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~---~v~~l~~~--~~~l~s~~~---------d~~i~vw 96 (708)
.++|+|||++++++ .|+.|.+||+.+++... .+.+|. . .+.+++|+ |++|++++. ++.|++|
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~-~~~~~~--~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYT-ILSNRT--MKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEE-EECHHH--HHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEE-EEcccc--ccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 78999999766554 69999999999988754 666554 3 38999999 899988876 7899999
Q ss_pred ECCCCeEe--EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccE----------------
Q psy12614 97 DMRRLNIK--SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRI---------------- 158 (708)
Q Consensus 97 d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v---------------- 158 (708)
|+.+++.+ ..+ ...+..++|||||+.||++. ++.|++||+.+++... ....++...|
T Consensus 96 d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~-l~~~~~~~~v~~g~~~~v~~ee~~~~ 170 (719)
T 1z68_A 96 DLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQ-ITFNGRENKIFNGIPDWVYEEEMLAT 170 (719)
T ss_dssp ETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEE-CCCCCBTTTEEESSCCHHHHHHTTCS
T ss_pred ECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEE-EecCCCcCCeEcccccceeeeecccC
Confidence 99998873 222 25688999999999999975 7899999999887642 1223333323
Q ss_pred -EEEEECCCCCEEEEecCC-----------------------------------eEEEEEcCCCceE--EEEEecccCCC
Q psy12614 159 -LCTAWHSSGDYLVTGCAA-----------------------------------AVRVWDIHKGHAI--HKMSLDKSSKF 200 (708)
Q Consensus 159 -~~~~~s~d~~~l~~~~~d-----------------------------------~i~iwd~~~~~~~--~~~~~~~~~~~ 200 (708)
.+++|||||++|++++.+ .|++||+.+++.. ..+.......
T Consensus 171 ~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~- 249 (719)
T 1z68_A 171 KYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIA- 249 (719)
T ss_dssp SCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHH-
T ss_pred cccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCC-
Confidence 489999999999987643 6889999887653 1221100000
Q ss_pred CCceeEEEEEEccCCEEEEE-cCC----CcEEEEe----CCCCeeEEEe----eccccCeE-----EEEEeCCCCEEEE-
Q psy12614 201 SKNTAVWCVAFCADFTIITG-DSG----GFVRFWD----GKTGVQWSDV----KTHKKDIL-----ALTVSEDENYLYC- 261 (708)
Q Consensus 201 ~~~~~v~~~~~~~~~~l~~~-~~d----g~i~~wd----~~~~~~~~~~----~~~~~~i~-----~~~~s~~~~~l~~- 261 (708)
.+...+..++|+||++++.. ... ..|.+|| ..+++....+ .+|...+. .++|+|||+.|+.
T Consensus 250 ~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 250 SSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp TSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred CCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEE
Confidence 23778999999999975433 222 2488999 8887766555 46667676 8899999986654
Q ss_pred -EecCC--eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCC-----CeEEEEeCCC-
Q psy12614 262 -AGVDP--TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLD-----SYLSLSYYPP- 331 (708)
Q Consensus 262 -~~~dg--~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d-----~~i~iw~~~~- 331 (708)
...+| .|.+|++.+ ++ ...+..+...+..+.+. ++.++..+.+ +..++|.+..
T Consensus 330 ~~~~~g~~~l~~~~~~~--------~~---------~~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~ 392 (719)
T 1z68_A 330 FSDKDGYKHIHYIKDTV--------EN---------AIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIG 392 (719)
T ss_dssp EECTTSCEEEEEESSCS--------TT---------CEECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECS
T ss_pred EEccCCceEEEEEECCC--------Cc---------eEecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCC
Confidence 44555 566677665 42 23344455556665555 6666655554 7888887754
Q ss_pred -C--ceeecCc----cCCCCceEEEEcCCcEEEEEc----CCeEEEEEecCCC
Q psy12614 332 -K--TLVKYPC----TLAQSTPVSLAKDIQHVLLQY----TSHLELWSLGSAQ 373 (708)
Q Consensus 332 -~--~~~~~~~----~~~~~~~~~~s~~~~~l~~~~----~~~i~i~~~~~~~ 373 (708)
+ ....+.. +......+.++|+++.++... ...+.+|++.+++
T Consensus 393 ~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 393 SYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp SSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred CCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence 3 1233331 112345688999998877531 2467888876644
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=1.5e-20 Score=187.53 Aligned_cols=262 Identities=12% Similarity=0.079 Sum_probs=197.6
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCC-cEEEEEEe--CCEE-EEEcCCCcEEEEECCCCeEeEEEee-c---
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN-SIECLTWF--NDRL-FSGGLQGFVNEYDMRRLNIKSSTAV-T--- 110 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~-~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~-~--- 110 (708)
++|++++.++.|.+||..+++.+.....++. . .+..++|+ ++++ +++..++.|.+||+.+++.+..+.. +
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADA--GPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTC--TTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCC--CCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccc
Confidence 4789999999999999999887763332332 2 48889999 6565 5566789999999999998877663 2
Q ss_pred -CCceEEEEEecCCCEEEEEe------------CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCe
Q psy12614 111 -SGTCWCLSVHKKKRLLAAGT------------EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAA 177 (708)
Q Consensus 111 -~~~v~~~~~s~~~~~la~~~------------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~ 177 (708)
...+.+++|+|+|++|+++. .++.|.+||+.+++.. ..+.. ...+.+++|+||+++|+++ .+.
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~--~~~~~-~~~~~~~~~s~dg~~l~~~-~~~ 155 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR--KAFEA-PRQITMLAWARDGSKLYGL-GRD 155 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE--EEEEC-CSSCCCEEECTTSSCEEEE-SSS
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE--EEEeC-CCCcceeEECCCCCEEEEe-CCe
Confidence 22677899999999998886 5799999999988776 33332 3457889999999988888 238
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc-CCC-----------------------cEEEEeCC
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD-SGG-----------------------FVRFWDGK 232 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~dg-----------------------~i~~wd~~ 232 (708)
|.+||+.+++.+..+..... .. .+.|+||++ ++..+ .++ .|.+||+.
T Consensus 156 i~~~d~~~~~~~~~~~~~~~-----~~---~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 227 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSW-----EA---ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE 227 (337)
T ss_dssp EEEEETTTTEEEEEECSTTT-----TT---TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT
T ss_pred EEEEECCCCcEeeeeecccc-----CC---CceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCC
Confidence 99999999988877654320 11 226788885 33332 222 47899999
Q ss_pred CCeeE-EEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe
Q psy12614 233 TGVQW-SDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 233 ~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
+++.. ..+..+...+.+++|+|++++++++ ++.|.+||+.+ ++ ....+. ....+.+++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~--------~~--------~~~~~~-~~~~~~~~~~s 288 (337)
T 1pby_B 228 TGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK--------NA--------SIKRVP-LPHSYYSVNVS 288 (337)
T ss_dssp TCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT--------TE--------EEEEEE-CSSCCCEEEEC
T ss_pred CCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC--------Cc--------Ccceec-CCCceeeEEEC
Confidence 88764 2234466678899999999999988 68999999988 54 233333 33567889998
Q ss_pred --CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 312 --GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 312 --~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+++|++++.++.|.+||+.+..
T Consensus 289 ~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 289 TDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp TTSCEEEEESBSSEEEEEETTTCC
T ss_pred CCCCEEEEEcCCCcEEEEECcCCc
Confidence 7889999999999999998765
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.87 E-value=1.1e-19 Score=181.71 Aligned_cols=247 Identities=8% Similarity=0.116 Sum_probs=174.3
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCCeEE-EEEecCCCCCcEEEEEEe--CCEEEEEc-CCCcEEEE
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRA---DQSIEIWDISETPHVD-RVFIGDPLSNSIECLTWF--NDRLFSGG-LQGFVNEY 96 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~---dg~v~iwd~~~~~~~~-~~~~~h~~~~~v~~l~~~--~~~l~s~~-~d~~i~vw 96 (708)
.+...+..++|+|||+ |++++. ++.|.+||+.++.... ..+..+. ..+..++|+ +++|++++ .++.|.+|
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~--~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPG--TPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEES--CCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCC--CCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 3456778899999999 555443 6899999998766322 2344566 788999999 88888877 78999999
Q ss_pred ECCC-Ce--EeEEEeec---------CCceEEEEEecCCCEEEEEeCCCcEEEEEcc-CCcEEEEEecccc-cccEEEEE
Q psy12614 97 DMRR-LN--IKSSTAVT---------SGTCWCLSVHKKKRLLAAGTEQGHINLFQIS-DEGLLYEKLLDRQ-QGRILCTA 162 (708)
Q Consensus 97 d~~~-~~--~~~~~~~~---------~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~-~~~~~~~~~~~~~-~~~v~~~~ 162 (708)
++.. +. .+..+... ...+.+++|+|||+++++...++.|.+|++. ++++.....+..+ ...+..++
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 9963 32 33333221 2248899999999966666668899999998 5655432322222 33678899
Q ss_pred ECCCCCEEEEec-CC-eEEEEEcCC--CceEE--EEEecccCCCCCceeEEEEEEccCCE-E-EEEcCCCcEEEEeCCC-
Q psy12614 163 WHSSGDYLVTGC-AA-AVRVWDIHK--GHAIH--KMSLDKSSKFSKNTAVWCVAFCADFT-I-ITGDSGGFVRFWDGKT- 233 (708)
Q Consensus 163 ~s~d~~~l~~~~-~d-~i~iwd~~~--~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~i~~wd~~~- 233 (708)
|+|||++|++++ .+ .|.+|++.. ++... .+...... +.....+..++|+|||+ + ++...++.|.+|++..
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~ 272 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD-YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD 272 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT-CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC-CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC
Confidence 999999777654 45 999999874 54322 22211100 01125688999999996 4 4556689999999873
Q ss_pred --CeeEEEeeccccCeEEEEEeCCCCEEEEEecC-CeEEEEEcc
Q psy12614 234 --GVQWSDVKTHKKDILALTVSEDENYLYCAGVD-PTVVCFQRT 274 (708)
Q Consensus 234 --~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g~i~iw~~~ 274 (708)
.+.+..+..+...+..++|+|||++|++++.+ +.+.+|++.
T Consensus 273 g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 273 GHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp GCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 25556666666778999999999999888765 899999654
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=4.4e-21 Score=212.20 Aligned_cols=188 Identities=7% Similarity=0.053 Sum_probs=139.7
Q ss_pred EEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCC---ceEEEEEecCCCEEEEEeC---------CCcEEEEEccC
Q psy12614 76 CLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSG---TCWCLSVHKKKRLLAAGTE---------QGHINLFQISD 142 (708)
Q Consensus 76 ~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~---~v~~~~~s~~~~~la~~~~---------d~~i~iwd~~~ 142 (708)
+++|+ ...++..+.|++|++||+.+++....+..|.. .+.+++|||||++||+++. ++.|++||+.+
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 67888 33566566799999999999998877776644 3899999999999998876 68999999999
Q ss_pred CcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeE----------------
Q psy12614 143 EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAV---------------- 206 (708)
Q Consensus 143 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v---------------- 206 (708)
++......+ ...+..++|||||+.|+++..+.|++||+.+++.......+. ...+
T Consensus 100 g~~~~~~~l---~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~------~~~v~~g~~~~v~~ee~~~~ 170 (719)
T 1z68_A 100 GEFVRGNEL---PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGR------ENKIFNGIPDWVYEEEMLAT 170 (719)
T ss_dssp TEECCSSCC---CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCB------TTTEEESSCCHHHHHHTTCS
T ss_pred Cccccceec---CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCC------cCCeEcccccceeeeecccC
Confidence 876210112 356889999999999999875599999999887654322211 2212
Q ss_pred -EEEEEccCCE-EEEEcCCC----------------------------------cEEEEeCCCCeeE---E-----Eeec
Q psy12614 207 -WCVAFCADFT-IITGDSGG----------------------------------FVRFWDGKTGVQW---S-----DVKT 242 (708)
Q Consensus 207 -~~~~~~~~~~-l~~~~~dg----------------------------------~i~~wd~~~~~~~---~-----~~~~ 242 (708)
.+++|+|||+ |++++.|. .|++||+.+++.. . .+.+
T Consensus 171 ~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 250 (719)
T 1z68_A 171 KYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIAS 250 (719)
T ss_dssp SCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHT
T ss_pred cccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCC
Confidence 4899999996 77665442 7889999887642 1 1335
Q ss_pred cccCeEEEEEeCCCCEEEEEecC----CeEEEEE
Q psy12614 243 HKKDILALTVSEDENYLYCAGVD----PTVVCFQ 272 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~~d----g~i~iw~ 272 (708)
|...+..++|+||++.+++.... ..|.+||
T Consensus 251 ~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 251 SDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp SCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred CcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 77889999999998777664432 2488888
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.87 E-value=4.2e-19 Score=177.62 Aligned_cols=277 Identities=14% Similarity=0.140 Sum_probs=187.8
Q ss_pred EEEEEe----CCCcEEEEeCC--CCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC---CCcEEEEECCCCe--EeEE
Q psy12614 40 RLAVSR----ADQSIEIWDIS--ETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL---QGFVNEYDMRRLN--IKSS 106 (708)
Q Consensus 40 ~la~~~----~dg~v~iwd~~--~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~---d~~i~vwd~~~~~--~~~~ 106 (708)
.+++|+ .++.|.+|+++ +++........+. ..+..++|+ |+ |++++. ++.|.+||+.+++ .+..
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~--~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAAT--QNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEEC--SCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeecc--CCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeee
Confidence 455553 24567777665 4555433444555 678889999 55 666654 6899999998776 4455
Q ss_pred EeecCCceEEEEEecCCCEEEEEe-CCCcEEEEEcc-CCcEEEEEeccc---------ccccEEEEEECCCCCEEEEecC
Q psy12614 107 TAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQIS-DEGLLYEKLLDR---------QQGRILCTAWHSSGDYLVTGCA 175 (708)
Q Consensus 107 ~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~-~~~~~~~~~~~~---------~~~~v~~~~~s~d~~~l~~~~~ 175 (708)
+..+...+..++|+|||++|++++ .++.|.+|++. ++.......+.. +...+.+++|+|||+.+++...
T Consensus 81 ~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~ 160 (347)
T 3hfq_A 81 VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG 160 (347)
T ss_dssp EEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT
T ss_pred eecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC
Confidence 566788899999999999998887 67999999995 444332222221 1234889999999995555555
Q ss_pred C-eEEEEEcC-CCceEEEEEecccCCCCCceeEEEEEEccCCE-EE-EEcCCCcEEEEeCCC--Cee--EEEeeccc---
Q psy12614 176 A-AVRVWDIH-KGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGFVRFWDGKT--GVQ--WSDVKTHK--- 244 (708)
Q Consensus 176 d-~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~i~~wd~~~--~~~--~~~~~~~~--- 244 (708)
+ .|.+|++. +++......... .....+..++|+|||+ ++ +...++.|.+|++.. ++. +..+....
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~----~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 236 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTM----EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADY 236 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEEC----CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTC
T ss_pred CCEEEEEEECCCCcEEEeeeEEc----CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCC
Confidence 6 99999998 555432221111 1134577899999996 44 456788999999874 543 22333222
Q ss_pred ---cCeEEEEEeCCCCEEEE-EecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEE
Q psy12614 245 ---KDILALTVSEDENYLYC-AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSG 318 (708)
Q Consensus 245 ---~~i~~~~~s~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~ 318 (708)
..+..++|+|||++|++ ...++.|.+|++.. .. .+.....+..+...+..++|+ +++|+++
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~--------~g-----~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA--------DG-----HLTLIQQISTEGDFPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG--------GG-----CEEEEEEEECSSSCCCEEEECTTSSEEEEE
T ss_pred CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC--------CC-----cEEEeEEEecCCCCcCeEEECCCCCEEEEE
Confidence 34888999999998854 45589999999974 10 122445555666678899999 7777777
Q ss_pred cC-CCeEEEEeC--CCCceee
Q psy12614 319 GL-DSYLSLSYY--PPKTLVK 336 (708)
Q Consensus 319 ~~-d~~i~iw~~--~~~~~~~ 336 (708)
+. ++.+.+|++ .++.+..
T Consensus 304 ~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 304 NQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp ETTTTEEEEEEECTTTCCEEE
T ss_pred EcCCCcEEEEEEeCCCCeEEe
Confidence 65 589999955 4444443
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=1.4e-18 Score=174.79 Aligned_cols=304 Identities=12% Similarity=0.118 Sum_probs=192.4
Q ss_pred CCCcEEEEeC--CCCeeEEEeeccccCeEEEEEeCCCCEEEEEecC----CeEEEEEccCCcccccCCCCCCCCcceEEe
Q psy12614 222 SGGFVRFWDG--KTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRS 295 (708)
Q Consensus 222 ~dg~i~~wd~--~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~ 295 (708)
.++.|.+|++ .+++.......+...+..++|+||+++|++++.+ +.+.+|++.. .. ......
T Consensus 25 ~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~--------~~----g~~~~~ 92 (361)
T 3scy_A 25 NSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDK--------EK----GTLHLL 92 (361)
T ss_dssp SCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEET--------TT----TEEEEE
T ss_pred CCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeC--------CC----CcEEEe
Confidence 3567888865 5565433322266778889999999999999886 7999999876 21 112233
Q ss_pred EEEeccccceEEEEEeCCEEEEEc-CCCeEEEEeCCCCc-eeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCC
Q psy12614 296 VNRVIHEGDVKSLALHGNRLYSGG-LDSYLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQ 373 (708)
Q Consensus 296 ~~~~~~~~~v~~l~~~~~~l~s~~-~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~ 373 (708)
.....+......+++.++.|++++ .++.+.+|++.... +.... .........
T Consensus 93 ~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~--------------------------~~~~~~g~~ 146 (361)
T 3scy_A 93 NTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPAS--------------------------DVIEFKGSG 146 (361)
T ss_dssp EEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCS--------------------------EEEECCCCC
T ss_pred eEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccc--------------------------eeEEccCCC
Confidence 334444556667777766665554 57788888886432 11111 000000000
Q ss_pred CCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-c-CCceEEEEEEecCC----c-ceeE---Ee
Q psy12614 374 STDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-T-ESCVRLHSLDLDGD----K-PQIS---RI 443 (708)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~-d~~i~i~~~~~~~~----~-~~~~---~~ 443 (708)
.. + .......+.+++|+|||++++++ . ++.+.+|++..... . +... ..
T Consensus 147 ------~~----------~------~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 147 ------PD----------K------ERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp ------SC----------T------TTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred ------CC----------c------cccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 00 0 00123446889999999987764 3 78999999986443 2 2221 11
Q ss_pred ecCCcccccceeEEEEEecCCCeEEEEec-CCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecC
Q psy12614 444 KNLPAPLFKSIFTHVLISADSTLLLAVSL-NGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRK 520 (708)
Q Consensus 444 ~~~~~~~~~~~i~~~~~s~d~~~l~~~~~-dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 520 (708)
..++.. ..+.+++|+|||+++++++. ++. +|+++.+..+.+..+.....+ ......++|+|||++|+++..+
T Consensus 205 ~~~~~~---~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~--~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 205 FKVAPG---SGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVN--AQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp EECCTT---CCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSC--CCCEEEEEECTTSSEEEEEECS
T ss_pred eecCCC---CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCC--CCCcccEEECCCCCEEEEECCC
Confidence 112222 24566999999999988874 555 888887655555555544443 4567899999999999777654
Q ss_pred --CeEEEEECC----c--eeeecCCCCCCceEEEEcCCCCEEEEEe-cCCcEEEEEcC--CCCCCchhhhhhccCchhhh
Q psy12614 521 --SHVVIWKNG----Q--HHASLPRYRKPSTAMAIHPTLSTLVTVY-SDHRIVEFDLN--RKAFTTFSRKLETNHPNEWL 589 (708)
Q Consensus 521 --~~i~iw~~~----~--~~~~~~~~~~~v~~l~~s~d~~~l~~~~-~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~ 589 (708)
+.|.+|++. + ....+.. ...+..++|+|||++|++++ .++.|.+|+++ +++... +.. .
T Consensus 280 ~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~--------~~~--~ 348 (361)
T 3scy_A 280 KADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTD--------IKK--D 348 (361)
T ss_dssp SSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEE--------CSC--C
T ss_pred CCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEee--------cce--e
Confidence 899999996 2 2223444 56789999999999999887 57889996554 565431 111 1
Q ss_pred cCCCCeeEEEeC
Q psy12614 590 SRQLPVLGIEFD 601 (708)
Q Consensus 590 ~~~~~i~~l~~s 601 (708)
.+...+.++.|.
T Consensus 349 ~~~~~p~~v~~~ 360 (361)
T 3scy_A 349 IKVDKPVCLKFV 360 (361)
T ss_dssp EECSSEEEEEEE
T ss_pred eeCCCCeEEEEc
Confidence 233467788775
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=1.2e-20 Score=203.08 Aligned_cols=266 Identities=13% Similarity=0.071 Sum_probs=192.2
Q ss_pred CCcEEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcC---CCcEEEEECCC
Q psy12614 26 PKVINCIACEPKSSRLAVSRA-DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGL---QGFVNEYDMRR 100 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~-dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~---d~~i~vwd~~~ 100 (708)
..+|.+++|+|||++||+++. ||++.||++.+++.. .+..|. ...+..++|+ ++.+++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~--~lt~~~-~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV--KLNREP-INSVLDPHYGVGRVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE--ECCSSC-CSEECEECTTCSEEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE--eeeccc-ccccccccCCCCeEEEEeccCCCCcceEEEEEec
Confidence 457999999999999999876 999999999666543 455444 2589999999 755555554 45556655432
Q ss_pred ---CeEeEEEeecCCceEEEEEecCCCEE-EEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 101 ---LNIKSSTAVTSGTCWCLSVHKKKRLL-AAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 101 ---~~~~~~~~~~~~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
+... .+... ..+...+|+||++.+ ++.+.++.+.+||+.+++.. .+..+.. .+++|+|||++|++++.+
T Consensus 98 ~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~---~l~~~~~--~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 98 SRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLR---ELARLPG--FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp TSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEE---EEEEESS--CEEEEEEETTEEEEEEEE
T ss_pred cCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEE---EeecCCC--ceEEECCCCCEEEEEEEc
Confidence 2222 33322 234467899988643 33344455669999998775 2222333 789999999999966543
Q ss_pred -----eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCC--cEEEEeCCCCeeEEEeeccccCeE
Q psy12614 177 -----AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGG--FVRFWDGKTGVQWSDVKTHKKDIL 248 (708)
Q Consensus 177 -----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg--~i~~wd~~~~~~~~~~~~~~~~i~ 248 (708)
.|++||+.+++.. .+. .+...+..++|+|||+ ++++..++ .|++||+.+++.. .+..|...+.
T Consensus 171 ~~~~~~i~~~d~~~g~~~-~l~-------~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~ 241 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGLR-VFD-------SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFS 241 (582)
T ss_dssp ETTEEEEEEEETTTCCCE-EEC-------CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHH
T ss_pred CCCCeEEEEEcCCCCCce-Eee-------cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChh
Confidence 6999999888765 343 2367789999999996 77777788 8999999998877 7777777777
Q ss_pred EEE--------EeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEc
Q psy12614 249 ALT--------VSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGG 319 (708)
Q Consensus 249 ~~~--------~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~ 319 (708)
.++ |+|||..+++++.++.+++|++ . . ... ...+.+.+++|+ +..+++++
T Consensus 242 ~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~-g--------~----------~~~--~~~~~v~~~~~sdg~~l~~~s 300 (582)
T 3o4h_A 242 SYRPTAITWLGYLPDGRLAVVARREGRSAVFID-G--------E----------RVE--APQGNHGRVVLWRGKLVTSHT 300 (582)
T ss_dssp HHCCSEEEEEEECTTSCEEEEEEETTEEEEEET-T--------E----------EEC--CCSSEEEEEEEETTEEEEEEE
T ss_pred hhhhccccceeEcCCCcEEEEEEcCCcEEEEEE-C--------C----------eec--cCCCceEEEEecCCEEEEEEc
Confidence 777 9999988999999999999998 5 1 111 234567788888 77778877
Q ss_pred CCC---eEEEEeCCC
Q psy12614 320 LDS---YLSLSYYPP 331 (708)
Q Consensus 320 ~d~---~i~iw~~~~ 331 (708)
.+. .+.+|+..+
T Consensus 301 ~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 301 SLSTPPRIVSLPSGE 315 (582)
T ss_dssp ETTEEEEEEEETTCC
T ss_pred CCCCCCeEEEEcCCC
Confidence 764 466666654
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=6.2e-20 Score=184.00 Aligned_cols=280 Identities=13% Similarity=0.057 Sum_probs=192.1
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEECCCCeEeEEE
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
.++++++++++++++.++.|.+||..+++.+. .+..+. ...+..++|+ ++++ ++...++.|.+||+.+++.+..+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~-~~~~~~-~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYK-SCVMPD-KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEE-EEECSS-CCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEE-EEecCC-CCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 46788999999999999999999999988766 554332 1367889999 6655 45567899999999999988777
Q ss_pred eecC------CceEEEEEecCCCEEEEEeCC------------CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCE
Q psy12614 108 AVTS------GTCWCLSVHKKKRLLAAGTEQ------------GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDY 169 (708)
Q Consensus 108 ~~~~------~~v~~~~~s~~~~~la~~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~ 169 (708)
.... ..+.+++|+|||++|++++.+ +.|.+||+.+++.........+...+.+++|+|||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS- 160 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-
Confidence 6432 237889999999999998865 899999998854321011112334688999999999
Q ss_pred EEEecCCeEEEEEcCCCceEEEEEecccCC--------------CC---CceeEEEEEEccCCEE--EEEcCCCcEEEEe
Q psy12614 170 LVTGCAAAVRVWDIHKGHAIHKMSLDKSSK--------------FS---KNTAVWCVAFCADFTI--ITGDSGGFVRFWD 230 (708)
Q Consensus 170 l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~--------------~~---~~~~v~~~~~~~~~~l--~~~~~dg~i~~wd 230 (708)
+++++. .|.+||+.+++.+..+....... .. .......+++++++.. ........+..+|
T Consensus 161 l~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 239 (349)
T 1jmx_B 161 LYVAGP-DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 239 (349)
T ss_dssp EEEESS-SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred EEEccC-cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEe
Confidence 655543 59999999999887765431000 00 0014456777765420 0000011122244
Q ss_pred CCCCee-EEEeeccccCeEEEEEeC-CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEE
Q psy12614 231 GKTGVQ-WSDVKTHKKDILALTVSE-DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSL 308 (708)
Q Consensus 231 ~~~~~~-~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l 308 (708)
..+++. ...+..+...+..++++| ++++++++ ++.|.+||+.+ ++ ....+. ....+.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~--------~~--------~~~~~~-~~~~~~~~ 300 (349)
T 1jmx_B 240 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQ--------RK--------LIKAAN-LDHTYYCV 300 (349)
T ss_dssp TTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTT--------TE--------EEEEEE-CSSCCCEE
T ss_pred ccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECcc--------Ce--------EEEEEc-CCCCccce
Confidence 444432 112233556788999999 99999988 78999999988 54 233333 33457789
Q ss_pred EEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 309 ALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 309 ~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+|+ ++.|++++.++.|.+||+.+..
T Consensus 301 ~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 301 AFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp EECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred EECCCCCEEEEecCCCeEEEEeccccc
Confidence 998 7788888899999999998765
No 156
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=1.4e-19 Score=185.25 Aligned_cols=251 Identities=12% Similarity=0.121 Sum_probs=177.2
Q ss_pred eeeeccC----CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC----------CeEE----EEEecCCCCCcEEEEEE
Q psy12614 18 NIKFYAP----EPKVINCIACEPKSSRLAVSRADQSIEIWDISET----------PHVD----RVFIGDPLSNSIECLTW 79 (708)
Q Consensus 18 ~~~~~~~----h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~----------~~~~----~~~~~h~~~~~v~~l~~ 79 (708)
.+|++.. +...++.+++++++.+|++|+.+| |+||+...- ..+. .....+. ..|.+++|
T Consensus 24 ~vri~~~~~~~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~l~~ 100 (434)
T 2oit_A 24 KVRIFDSPEELPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMK--FPIHHLAL 100 (434)
T ss_dssp EEECSCCCSSCCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCS--SCEEEEEE
T ss_pred eEEecCCccccCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCC--CcccEEEE
Confidence 4555532 345689999999999999999887 899875321 0110 0112244 78999999
Q ss_pred e--CCEEE----EEcCCCcEEEEECCCC--------eE---eEEEeecCCceEEEEEecC-CCEEEEEeCCCcEEEEEcc
Q psy12614 80 F--NDRLF----SGGLQGFVNEYDMRRL--------NI---KSSTAVTSGTCWCLSVHKK-KRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 80 ~--~~~l~----s~~~d~~i~vwd~~~~--------~~---~~~~~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~ 141 (708)
+ +++|+ +++.|++|++||+.++ +. ...+.+|...|.+++|+|+ +.+||+++.||+|++||++
T Consensus 101 spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~ 180 (434)
T 2oit_A 101 SCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVT 180 (434)
T ss_dssp CTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEES
T ss_pred cCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcC
Confidence 9 88998 7889999999998765 22 4455679999999999998 7899999999999999999
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE--
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-- 218 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-- 218 (708)
++... ....+|...|.+++|+|+|++|++++.| .|++||++ ++....+.......-.+...+.+++|++++.++
T Consensus 181 ~~~~~--~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 181 ETVKV--CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp SSEEE--EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred CCcce--eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEE
Confidence 88654 4556688999999999999999999999 99999998 666655543321000124589999999998744
Q ss_pred EEcCCC------cEEEEeCCCCe-----eEEEee-------ccccCeEEEEEeCCCCEEEEEec-CCeEEEEEcc
Q psy12614 219 TGDSGG------FVRFWDGKTGV-----QWSDVK-------THKKDILALTVSEDENYLYCAGV-DPTVVCFQRT 274 (708)
Q Consensus 219 ~~~~dg------~i~~wd~~~~~-----~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~ 274 (708)
....+| .+++|++.... ....+. +....-..+.+-++.+++++++. .+.|.++...
T Consensus 258 ~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 258 YAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp EEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred EccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 233343 38999997542 112211 12222233444477777776654 3446666543
No 157
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.86 E-value=6.5e-20 Score=202.49 Aligned_cols=322 Identities=11% Similarity=0.029 Sum_probs=214.6
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCC---CcEEEEEEe--CCEEEEEcCC---------Cc
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLS---NSIECLTWF--NDRLFSGGLQ---------GF 92 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~---~~v~~l~~~--~~~l~s~~~d---------~~ 92 (708)
....+++|+|||++|+++ ||.|++||+.+++... .+.+|... .....++|| |++|+.++.+ +.
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSV-FLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEE-EECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEE-EEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 346689999999999986 8999999999998765 78887621 122447888 8899988876 56
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccE--------------
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRI-------------- 158 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v-------------- 158 (708)
+.+||+.+++.. .+..|.+.+...+|||||+.||.+ .++.|++|++.+++... .+..++...+
T Consensus 94 ~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 94 YDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEE-EcCCCCccceecCcccccccchhc
Confidence 779999998865 366777889999999999999987 46899999999887642 2333433333
Q ss_pred ---EEEEECCCCCEEEEecCC-------------------------------------eEEEEEcCC---Cc--eEEEEE
Q psy12614 159 ---LCTAWHSSGDYLVTGCAA-------------------------------------AVRVWDIHK---GH--AIHKMS 193 (708)
Q Consensus 159 ---~~~~~s~d~~~l~~~~~d-------------------------------------~i~iwd~~~---~~--~~~~~~ 193 (708)
..+.|||||++||.++.| .|.+||+.+ ++ ....+.
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 348999999999987422 477888887 63 233333
Q ss_pred ecccCCCCCceeEEEEEEccCCE-EEEEc----CCCcEEEEeCCCCe----eE--EEe--eccccCeE-----EEEEeCC
Q psy12614 194 LDKSSKFSKNTAVWCVAFCADFT-IITGD----SGGFVRFWDGKTGV----QW--SDV--KTHKKDIL-----ALTVSED 255 (708)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~~~~~~-l~~~~----~dg~i~~wd~~~~~----~~--~~~--~~~~~~i~-----~~~~s~~ 255 (708)
...... ++...+..++|+|||+ ++... .+..|.+||+.+++ +. ..+ ..+...+. .++|+||
T Consensus 251 ~~~~~~-~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD 329 (740)
T 4a5s_A 251 APASML-IGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD 329 (740)
T ss_dssp CCHHHH-TSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT
T ss_pred CCccCC-CCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC
Confidence 210000 1377899999999997 44332 23479999998887 22 112 34555544 7889999
Q ss_pred CCEEE-EEec-C--CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEE-EeCCEEEE-EcC----CC--e
Q psy12614 256 ENYLY-CAGV-D--PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLA-LHGNRLYS-GGL----DS--Y 323 (708)
Q Consensus 256 ~~~l~-~~~~-d--g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~-~~~~~l~s-~~~----d~--~ 323 (708)
|+.|+ ..+. + ..|++|+..+ ++ ...+......+..+. ++++.++. +.. .+ .
T Consensus 330 G~~l~~~~s~~~G~~~l~~~~~~~--------~~---------~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ 392 (740)
T 4a5s_A 330 GNSFYKIISNEEGYRHICYFQIDK--------KD---------CTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRN 392 (740)
T ss_dssp SSEEEEEEECTTSCEEEEEEETTC--------SS---------CEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBE
T ss_pred CCEEEEEEEcCCCceEEEEEECCC--------Cc---------eEecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeE
Confidence 99877 5553 3 3688888876 43 223333344455543 44555444 433 22 4
Q ss_pred EEEEeCCCCcee-ecCcc----CCCCceEEEEcCCcEEEEEcCC----eEEEEEecCC
Q psy12614 324 LSLSYYPPKTLV-KYPCT----LAQSTPVSLAKDIQHVLLQYTS----HLELWSLGSA 372 (708)
Q Consensus 324 i~iw~~~~~~~~-~~~~~----~~~~~~~~~s~~~~~l~~~~~~----~i~i~~~~~~ 372 (708)
|...++.+.... .+.+. ........+||+++.++....+ .+.+++..++
T Consensus 393 ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~ 450 (740)
T 4a5s_A 393 LYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 450 (740)
T ss_dssp EEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTT
T ss_pred EEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCC
Confidence 555555554433 33322 1344678999999988765333 5677766543
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=1.2e-18 Score=175.33 Aligned_cols=245 Identities=10% Similarity=0.056 Sum_probs=170.5
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCC----CcEEEEeCCC--CCeEE-EEEecCCCCCcEEEEEEeCCEEEEEc-CCCcEEEE
Q psy12614 25 EPKVINCIACEPKSSRLAVSRAD----QSIEIWDISE--TPHVD-RVFIGDPLSNSIECLTWFNDRLFSGG-LQGFVNEY 96 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~d----g~v~iwd~~~--~~~~~-~~~~~h~~~~~v~~l~~~~~~l~s~~-~d~~i~vw 96 (708)
+...+..++|+|||++|++++.+ +.|.+|++.. ++... .....+. .....+++.+++|++++ .++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~--~~p~~~~~dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG--ADPCYLTTNGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS--SCEEEEEECSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC--CCcEEEEECCCEEEEEECCCCEEEEE
Confidence 67778889999999999998875 7999999876 43322 1333344 66778888877777665 68899999
Q ss_pred ECCCCeEeEEE---eec-----------CCceEEEEEecCCCEEEEEeC-CCcEEEEEccCCc-------EEEE----Ee
Q psy12614 97 DMRRLNIKSST---AVT-----------SGTCWCLSVHKKKRLLAAGTE-QGHINLFQISDEG-------LLYE----KL 150 (708)
Q Consensus 97 d~~~~~~~~~~---~~~-----------~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~-------~~~~----~~ 150 (708)
++.....+..+ ..+ ...+.+++|+|||++|++++. ++.|.+|++.... +... ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 99754322111 111 234588999999997766554 7899999987543 2111 12
Q ss_pred cccccccEEEEEECCCCCEEEEec-CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC--CCc
Q psy12614 151 LDRQQGRILCTAWHSSGDYLVTGC-AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS--GGF 225 (708)
Q Consensus 151 ~~~~~~~v~~~~~s~d~~~l~~~~-~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~--dg~ 225 (708)
.......+..++|+|||+++++++ .+ .|.+|++.+++.......... . .+......++|+|||+ ++++.. ++.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~-~-~~~~~~~~i~~spdg~~l~v~~~~~~~~ 283 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD-T-VNAQGSGDIHLSPDGKYLYASNRLKADG 283 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC-S-SCCCCEEEEEECTTSSEEEEEECSSSCE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC-C-CCCCCcccEEECCCCCEEEEECCCCCCE
Confidence 223345678999999999888777 45 999999987754322221110 0 1134568999999996 545444 589
Q ss_pred EEEEeCC--CCe--eEEEeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEcc
Q psy12614 226 VRFWDGK--TGV--QWSDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRT 274 (708)
Q Consensus 226 i~~wd~~--~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~ 274 (708)
|.+|++. +++ .+..+.. ...+..++|+|||++|++++ .++.|.+|++.
T Consensus 284 i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 284 VAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 9999985 444 4444544 56788999999999998887 56899997665
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.85 E-value=1.9e-19 Score=183.32 Aligned_cols=290 Identities=11% Similarity=0.016 Sum_probs=203.1
Q ss_pred EEEECCCCeEeEEEeecCCceEE-----EEEecCCCEEEEEeC-CC--cEEEEEccCCcEEEEEecccccccEEEEEECC
Q psy12614 94 NEYDMRRLNIKSSTAVTSGTCWC-----LSVHKKKRLLAAGTE-QG--HINLFQISDEGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~~v~~-----~~~s~~~~~la~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
..+|..++..+..+..|...... .+|||||++|++++. ++ .|.+||+.+++.. .....+...+..++|+|
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~--~lt~~~~~~~~~~~~sp 90 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT--QLTEGRGDNTFGGFLSP 90 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE--ECCCSSCBCSSSCEECT
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE--EeeeCCCCCccceEEcC
Confidence 44577888888888888766666 889999999999887 66 4888999988875 44555555555778999
Q ss_pred CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEE--EEccCCEEEEE----------------------
Q psy12614 166 SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCV--AFCADFTIITG---------------------- 220 (708)
Q Consensus 166 d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~l~~~---------------------- 220 (708)
||+.|+.++.+ .|++||+.+++........ ...+... .++|+++++++
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~-------~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 163 (388)
T 3pe7_A 91 DDDALFYVKDGRNLMRVDLATLEENVVYQVP-------AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYF 163 (388)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECC-------TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGG
T ss_pred CCCEEEEEeCCCeEEEEECCCCcceeeeech-------hhcccccceeECCCCCeeccccccCcccccccccchhhhhhc
Confidence 99999999988 9999999999877655543 3334333 45889864432
Q ss_pred -cCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeC-CCCEEEEEecC------CeEEEEEccCCcccccCCCCCCCCcce
Q psy12614 221 -DSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE-DENYLYCAGVD------PTVVCFQRTRKPQVCSTSGPEQGSSVW 292 (708)
Q Consensus 221 -~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~g~~~~~~~~ 292 (708)
..+..|.+||+.+++... +..+...+..++|+| ||+.|+....+ ..|.+++... ++
T Consensus 164 ~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--------~~------- 227 (388)
T 3pe7_A 164 TKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG--------TN------- 227 (388)
T ss_dssp GCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS--------CC-------
T ss_pred cCCcceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC--------Cc-------
Confidence 244789999999886544 444667889999999 99988877653 3788888766 42
Q ss_pred EEeEEEeccc--cceEEEEEe--CCEEEEEcC-C----CeEEEEeCCCCceeecCccCCC-------CceEEEEcCCcEE
Q psy12614 293 VRSVNRVIHE--GDVKSLALH--GNRLYSGGL-D----SYLSLSYYPPKTLVKYPCTLAQ-------STPVSLAKDIQHV 356 (708)
Q Consensus 293 ~~~~~~~~~~--~~v~~l~~~--~~~l~s~~~-d----~~i~iw~~~~~~~~~~~~~~~~-------~~~~~~s~~~~~l 356 (708)
...+..+. ..+...+|+ |+.|+..+. + ..|.+||+.++....+. .... .....|+|||+.+
T Consensus 228 --~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~~~~~~~spdg~~l 304 (388)
T 3pe7_A 228 --MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLT-SMPACSHLMSNYDGSLMVGDGSDA 304 (388)
T ss_dssp --CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEE-EECCEEEEEECTTSSEEEEEECCC
T ss_pred --eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEE-cCCCceeeeecCCCCeEccCCCcc
Confidence 22333333 246778888 666655433 2 24999999988754443 1111 3345899999988
Q ss_pred EEE----------cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCC-----------ceEEEEeCCCC
Q psy12614 357 LLQ----------YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNA-----------TIRCSVVSNDG 415 (708)
Q Consensus 357 ~~~----------~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~i~~~~~s~~g 415 (708)
+.. .+..|.+|++.+++ +..+. .+.. .+.+++|+|||
T Consensus 305 ~~~~~~~~~~~~~~~~~i~~~d~~~~~---------------------~~~l~-~~~~~~~~~~~~~~~~~~~~~~spDg 362 (388)
T 3pe7_A 305 PVDVQDDSGYKIENDPFLYVFNMKNGT---------------------QHRVA-RHDTSWKVFEGDRQVTHPHPSFTPDD 362 (388)
T ss_dssp ------------CCCCEEEEEETTTTE---------------------EEEEE-ECCCCCCCBTTBSSTTCCCCEECTTS
T ss_pred eeEeeeccccccCCCCEEEEEeccCCc---------------------eEEec-cccCcccccccccccCCCCccCCCCC
Confidence 753 34579999988754 22222 2333 46788999999
Q ss_pred cEEEE-Ec-CCceEEEEEEe
Q psy12614 416 KYVAY-ST-ESCVRLHSLDL 433 (708)
Q Consensus 416 ~~l~~-~~-d~~i~i~~~~~ 433 (708)
+.|++ +. ++...||.++.
T Consensus 363 ~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 363 KQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp SEEEEEECTTSSCEEEEEEC
T ss_pred CEEEEEecCCCceeEEEEEC
Confidence 99987 44 78888888764
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.83 E-value=3.8e-19 Score=181.13 Aligned_cols=284 Identities=10% Similarity=0.024 Sum_probs=197.3
Q ss_pred eeeeeccCCCCcEEE-----EEEcCCCCEEEEEeC-CCc--EEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEE
Q psy12614 17 HNIKFYAPEPKVINC-----IACEPKSSRLAVSRA-DQS--IEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFS 86 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~-----~~~s~~~~~la~~~~-dg~--v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s 86 (708)
...+.+..|+..... .+|||||++||+++. +|. |.+||+.+++... ...++. ..+..++|+ ++.|+.
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~-lt~~~~--~~~~~~~~spdg~~l~~ 97 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQ-LTEGRG--DNTFGGFLSPDDDALFY 97 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEE-CCCSSC--BCSSSCEECTTSSEEEE
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEE-eeeCCC--CCccceEEcCCCCEEEE
Confidence 345566777777766 899999999999887 664 8888998887654 555555 555567899 889999
Q ss_pred EcCCCcEEEEECCCCeEeEEEeecCCceEEEE--EecCCCEEEEEe----------------------CCCcEEEEEccC
Q psy12614 87 GGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLS--VHKKKRLLAAGT----------------------EQGHINLFQISD 142 (708)
Q Consensus 87 ~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~--~s~~~~~la~~~----------------------~d~~i~iwd~~~ 142 (708)
++.++.|.+||+.+++....+..+...+.... ++|++++++... .+..|++||+.+
T Consensus 98 ~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 98 VKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp EETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred EeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 99999999999999988877777766665444 489999887532 346799999999
Q ss_pred CcEEEEEecccccccEEEEEECC-CCCEEEEecC------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC
Q psy12614 143 EGLLYEKLLDRQQGRILCTAWHS-SGDYLVTGCA------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD 214 (708)
Q Consensus 143 ~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 214 (708)
++.. .+..+...+..+.|+| ||+.|+.+.. . .|.++|...+.. ..+... .....+..++|+||
T Consensus 178 g~~~---~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~-----~~~~~~~~~~~spd 248 (388)
T 3pe7_A 178 GEST---VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTH-----AEGESCTHEFWVPD 248 (388)
T ss_dssp CCEE---EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCC-----CTTEEEEEEEECTT
T ss_pred CceE---EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeC-----CCCcccccceECCC
Confidence 8764 4445667789999999 9999887653 4 788888765543 333221 11246788999999
Q ss_pred CE-EEEEcC-CC----cEEEEeCCCCeeEE--Eeecccc---CeEEEEEeCCCCEEEEE---------ecCCeEEEEEcc
Q psy12614 215 FT-IITGDS-GG----FVRFWDGKTGVQWS--DVKTHKK---DILALTVSEDENYLYCA---------GVDPTVVCFQRT 274 (708)
Q Consensus 215 ~~-l~~~~~-dg----~i~~wd~~~~~~~~--~~~~~~~---~i~~~~~s~~~~~l~~~---------~~dg~i~iw~~~ 274 (708)
|+ ++..+. ++ .|++||+.+++... .+.++.. ....++|+|||+.|+.. ..+..|++||+.
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp SSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred CCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence 96 544332 22 39999999887433 3322110 01223799999988754 446689999998
Q ss_pred CCcccccCCCCCCCCcceEEeEEEecccc-----------ceEEEEEe--CCEEEEEc-CCCeEEEEeC
Q psy12614 275 RKPQVCSTSGPEQGSSVWVRSVNRVIHEG-----------DVKSLALH--GNRLYSGG-LDSYLSLSYY 329 (708)
Q Consensus 275 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----------~v~~l~~~--~~~l~s~~-~d~~i~iw~~ 329 (708)
+ ++ ...+..+.. .+.+++|+ ++.|+..+ .++...+|.+
T Consensus 329 ~--------~~---------~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 329 N--------GT---------QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp T--------TE---------EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred C--------Cc---------eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 8 53 344555555 57778888 66666554 4666555543
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=5.2e-19 Score=190.16 Aligned_cols=264 Identities=9% Similarity=0.038 Sum_probs=183.4
Q ss_pred CCceEEEEEecCCCEEEEEeC-CCcEEEEEccCCcEEEEEeccccc-ccEEEEEECCCCCEEEEecC---C-eEEEEEcC
Q psy12614 111 SGTCWCLSVHKKKRLLAAGTE-QGHINLFQISDEGLLYEKLLDRQQ-GRILCTAWHSSGDYLVTGCA---A-AVRVWDIH 184 (708)
Q Consensus 111 ~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~s~d~~~l~~~~~---d-~i~iwd~~ 184 (708)
..+|++++|+|||++||+++. ||+++||++.+++.. .+..+. ..+..++|+|| +.+++++. + ...+|.+.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~---~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV---KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE---ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE---eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 457999999999999999887 999999999877763 455555 68999999999 77777664 3 45555443
Q ss_pred C---CceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEE
Q psy12614 185 K---GHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYL 259 (708)
Q Consensus 185 ~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 259 (708)
. +... .+.. .......+|+||| .+++.+.++.+.+||+.+++.......+ . .+++|+|||++|
T Consensus 97 ~~~~g~~~-~l~~--------~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~l 164 (582)
T 3o4h_A 97 TSRPGEEQ-RLEA--------VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLI 164 (582)
T ss_dssp TTSTTCCE-ECTT--------SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEE
T ss_pred ccCCCccc-cccC--------CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEE
Confidence 2 3322 3221 1223355777777 3455555556669999988766555433 3 789999999999
Q ss_pred EEEecC----CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCC--eEEEEeCCC
Q psy12614 260 YCAGVD----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDS--YLSLSYYPP 331 (708)
Q Consensus 260 ~~~~~d----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~--~i~iw~~~~ 331 (708)
++++.+ +.|++||+.+ ++ ...+..|...+..++|+ |+.|+++..++ .|++||+.+
T Consensus 165 a~~~~~~~~~~~i~~~d~~~--------g~---------~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 165 AGLGFFGGGRVSLFTSNLSS--------GG---------LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp EEEEEEETTEEEEEEEETTT--------CC---------CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred EEEEEcCCCCeEEEEEcCCC--------CC---------ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 988777 7899999988 64 34566777777888887 67777666676 666666655
Q ss_pred CceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEE-
Q psy12614 332 KTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSV- 410 (708)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~- 410 (708)
+... ....+...+..++
T Consensus 228 ~~~~--------------------------------------------------------------~~~~~~~~~~~~~~ 245 (582)
T 3o4h_A 228 GSVE--------------------------------------------------------------DLELPSKDFSSYRP 245 (582)
T ss_dssp CCEE--------------------------------------------------------------ECCCSCSHHHHHCC
T ss_pred CcEE--------------------------------------------------------------EccCCCcChhhhhh
Confidence 4322 1122333334444
Q ss_pred -------eCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc---EEEe
Q psy12614 411 -------VSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP---LYII 479 (708)
Q Consensus 411 -------~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~---i~~~ 479 (708)
|+|||.+++++. ++++++|++ + . ... .+ ...+.+++|+ |++++++++.+.. +|.+
T Consensus 246 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g--~--~~~---~~----~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~ 311 (582)
T 3o4h_A 246 TAITWLGYLPDGRLAVVARREGRSAVFID--G--E--RVE---AP----QGNHGRVVLW-RGKLVTSHTSLSTPPRIVSL 311 (582)
T ss_dssp SEEEEEEECTTSCEEEEEEETTEEEEEET--T--E--EEC---CC----SSEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred ccccceeEcCCCcEEEEEEcCCcEEEEEE--C--C--eec---cC----CCceEEEEec-CCEEEEEEcCCCCCCeEEEE
Confidence 999997777654 999999998 1 1 111 11 1256679999 9999998888876 8888
Q ss_pred cCCC
Q psy12614 480 DLSS 483 (708)
Q Consensus 480 ~~~~ 483 (708)
+...
T Consensus 312 d~~~ 315 (582)
T 3o4h_A 312 PSGE 315 (582)
T ss_dssp TTCC
T ss_pred cCCC
Confidence 7653
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=8e-19 Score=176.43 Aligned_cols=248 Identities=8% Similarity=0.035 Sum_probs=173.3
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCCeEEEEEecCCCCCcEEEEEEe--CCE--EEEEc-----------
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDIS-ETPHVDRVFIGDPLSNSIECLTWF--NDR--LFSGG----------- 88 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~-~~~~~~~~~~~h~~~~~v~~l~~~--~~~--l~s~~----------- 88 (708)
+...+..++|+|||++|++++.+ .|.+|++. +++... ...... .+.+.+++|+ |++ ++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~-~~~~~~-~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVH-EASHPI-GGHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEE-EEEEEC-CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEE-eeEeec-CCCCccEEECCCCCEEEEEEecCCcceecccee
Confidence 34568899999999999998887 99999997 776543 222111 1234557888 663 44553
Q ss_pred --CCCcEEEEECC-CCeEeEEEee----cCCceEEEEEecCCCEEEEEeC-CCcEEEEEcc-CCcEEEEEecc--ccccc
Q psy12614 89 --LQGFVNEYDMR-RLNIKSSTAV----TSGTCWCLSVHKKKRLLAAGTE-QGHINLFQIS-DEGLLYEKLLD--RQQGR 157 (708)
Q Consensus 89 --~d~~i~vwd~~-~~~~~~~~~~----~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~-~~~~~~~~~~~--~~~~~ 157 (708)
.+|.+.+|++. .++....+.. +...+.+++|+|||++|+++.. ++.|++|++. +++......+. .+...
T Consensus 115 ~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~ 194 (365)
T 1jof_A 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDH 194 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCC
T ss_pred ecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCC
Confidence 68999999997 4665544442 4568999999999998887664 6799999998 77764323332 23567
Q ss_pred EEEEEECCCCCEEEEecC-C-eEEEEEcC--CCceEE---EEEecccCCCCCce------eEEEEE-EccCCE-EEEEcC
Q psy12614 158 ILCTAWHSSGDYLVTGCA-A-AVRVWDIH--KGHAIH---KMSLDKSSKFSKNT------AVWCVA-FCADFT-IITGDS 222 (708)
Q Consensus 158 v~~~~~s~d~~~l~~~~~-d-~i~iwd~~--~~~~~~---~~~~~~~~~~~~~~------~v~~~~-~~~~~~-l~~~~~ 222 (708)
+..++|+|||++|++++. + .|.+|++. +++... .+........++.. .+..++ |+|||+ +++++.
T Consensus 195 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred CCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC
Confidence 899999999999988775 4 89999765 565432 22221100000111 588999 999996 555443
Q ss_pred C-C-----cEEEEeCC-CCeeEE---EeeccccCeEEEEEeC---CCCEEEEEecC-CeEEEEEccC
Q psy12614 223 G-G-----FVRFWDGK-TGVQWS---DVKTHKKDILALTVSE---DENYLYCAGVD-PTVVCFQRTR 275 (708)
Q Consensus 223 d-g-----~i~~wd~~-~~~~~~---~~~~~~~~i~~~~~s~---~~~~l~~~~~d-g~i~iw~~~~ 275 (708)
+ + .|.+|++. +++... ....+...+..++|+| ||++|++++.+ +.|.+|++..
T Consensus 275 ~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 275 ANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp ESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 2 2 89999986 566543 2333455677899999 89999999875 8999999986
No 163
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.82 E-value=7.8e-18 Score=172.26 Aligned_cols=251 Identities=14% Similarity=0.094 Sum_probs=172.0
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCC-----------cEEEE--Eeccccccc
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE-----------GLLYE--KLLDRQQGR 157 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~-----------~~~~~--~~~~~~~~~ 157 (708)
+.+++|+.... .....+..+++++++.++++++.++ +++|+.... ..... .....+...
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 45777764321 1234688999999999999999888 899886421 11100 001134567
Q ss_pred EEEEEECCCCCEEE----EecCC-eEEEEEcCCC--------ceEEEEEecccCCCCCceeEEEEEEccC-C-EEEEEcC
Q psy12614 158 ILCTAWHSSGDYLV----TGCAA-AVRVWDIHKG--------HAIHKMSLDKSSKFSKNTAVWCVAFCAD-F-TIITGDS 222 (708)
Q Consensus 158 v~~~~~s~d~~~l~----~~~~d-~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~-~l~~~~~ 222 (708)
|.+++|+|++++|+ +++.| .|++||+.++ +.+..+.... +|...|.+++|+|+ + .+++++.
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~----~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLK----DAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCC----SGGGSEEEEEECSSCTTEEEEEET
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccC----CCCCceEEEEECCCCCCEEEEEEC
Confidence 99999999999999 77888 9999998765 3333333321 34889999999998 4 4889999
Q ss_pred CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec--
Q psy12614 223 GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI-- 300 (708)
Q Consensus 223 dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-- 300 (708)
||.|++||++++..+....+|...|.+++|+|+|++|++|+.||.|++||.+. . ....+..
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~--------~---------~~~~~~~~~ 233 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTL--------Q---------EKKVIPCPP 233 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTC--------C---------EEEEECCCT
T ss_pred CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCC--------c---------ccccccCCc
Confidence 99999999999977777777899999999999999999999999999999873 1 1222222
Q ss_pred -----cccceEEEEEe-CCEEE-E-EcCCC------eEEEEeCCCCc------eeecCcc-----CCCCceEEEE--cCC
Q psy12614 301 -----HEGDVKSLALH-GNRLY-S-GGLDS------YLSLSYYPPKT------LVKYPCT-----LAQSTPVSLA--KDI 353 (708)
Q Consensus 301 -----~~~~v~~l~~~-~~~l~-s-~~~d~------~i~iw~~~~~~------~~~~~~~-----~~~~~~~~~s--~~~ 353 (708)
|...|.+++|+ ...++ + ...|| .+++|++.... ...+..+ ....+.+.+. ++.
T Consensus 234 ~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw 313 (434)
T 2oit_A 234 FYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEW 313 (434)
T ss_dssp TCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGG
T ss_pred ccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccC
Confidence 23478999999 44333 2 33332 48999997642 2222211 1122233444 777
Q ss_pred cEEEEE--cCCeEEEEEec
Q psy12614 354 QHVLLQ--YTSHLELWSLG 370 (708)
Q Consensus 354 ~~l~~~--~~~~i~i~~~~ 370 (708)
++++++ ....+.+....
T Consensus 314 ~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 314 DLVLAASAASTEVSILARQ 332 (434)
T ss_dssp TEEEEEETTCSBCEEEEEC
T ss_pred CEEEEecCCCCceeEEEec
Confidence 777664 33445555543
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=3.9e-18 Score=188.25 Aligned_cols=306 Identities=9% Similarity=0.030 Sum_probs=202.3
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCc-----eEEEEEecCCCEEEEEeCC---------CcE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGT-----CWCLSVHKKKRLLAAGTEQ---------GHI 135 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~la~~~~d---------~~i 135 (708)
....+++|+ +.+++++ |++|++||+.++++...+..|... ...++|||||++|++++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 345688999 6666665 999999999999988888877643 2347899999999998875 567
Q ss_pred EEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeE---------
Q psy12614 136 NLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAV--------- 206 (708)
Q Consensus 136 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v--------- 206 (708)
.+||+.+++. ..+..+.+.+..++|||||+.||.+..+.|++|++.+++..+ +... +....+
T Consensus 95 ~~~d~~~~~~---~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~-lt~~-----g~~~~~~~g~~~~v~ 165 (740)
T 4a5s_A 95 DIYDLNKRQL---ITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR-ITWT-----GKEDIIYNGITDWVY 165 (740)
T ss_dssp EEEETTTTEE---CCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEE-CCSC-----CBTTTEEESBCCHHH
T ss_pred EEEECCCCcE---EEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEE-EcCC-----CCccceecCcccccc
Confidence 7999999987 457777888999999999999999865599999998887543 2221 111112
Q ss_pred --------EEEEEccCCE-EEEEcCC------------------------------------CcEEEEeCCC---Ce--e
Q psy12614 207 --------WCVAFCADFT-IITGDSG------------------------------------GFVRFWDGKT---GV--Q 236 (708)
Q Consensus 207 --------~~~~~~~~~~-l~~~~~d------------------------------------g~i~~wd~~~---~~--~ 236 (708)
..+.|+|||+ |+.+..| ..|++||+.+ ++ .
T Consensus 166 ~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~ 245 (740)
T 4a5s_A 166 EEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT 245 (740)
T ss_dssp HHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC
T ss_pred cchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce
Confidence 3489999996 6655321 1588899988 73 2
Q ss_pred EEEee------ccccCeEEEEEeCCCCEEEEEec----CCeEEEEEccCCcccccCCCCCCCCcceEE--eEE--Eeccc
Q psy12614 237 WSDVK------THKKDILALTVSEDENYLYCAGV----DPTVVCFQRTRKPQVCSTSGPEQGSSVWVR--SVN--RVIHE 302 (708)
Q Consensus 237 ~~~~~------~~~~~i~~~~~s~~~~~l~~~~~----dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~--~~~--~~~~~ 302 (708)
...+. ++...+..++|+|||+.++.... +..|++||+.+ |+ ..|.. ... -..|.
T Consensus 246 ~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t--------g~----~~~~~~~~~~l~~~~~~ 313 (740)
T 4a5s_A 246 SIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE--------SS----GRWNCLVARQHIEMSTT 313 (740)
T ss_dssp EEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET--------TT----TEEEECGGGCEEEECSS
T ss_pred EEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC--------Cc----cccceeEEEEeeeccCC
Confidence 23333 37778999999999987765543 23799999988 42 00100 011 13444
Q ss_pred cceE-----EEEEe--CCEEE-EEc-CC--CeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEE-EcC-----CeEE
Q psy12614 303 GDVK-----SLALH--GNRLY-SGG-LD--SYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLL-QYT-----SHLE 365 (708)
Q Consensus 303 ~~v~-----~l~~~--~~~l~-s~~-~d--~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~-~~~-----~~i~ 365 (708)
..|. ...|+ |+.++ ..+ .+ ..|.+|++.++....+....-.... .+.+|++.++. +.. +...
T Consensus 314 ~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~-~~~~d~~~i~f~~~~~~~~~~~~~ 392 (740)
T 4a5s_A 314 GWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIG-IEALTSDYLYYISNEYKGMPGGRN 392 (740)
T ss_dssp SCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEE-EEEECSSEEEEEESCGGGCTTCBE
T ss_pred ceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEE-EEEEeCCEEEEEEecCCCCCceeE
Confidence 4443 67788 67666 554 33 3688889988877766622222222 23355766665 332 2345
Q ss_pred EEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEe----cCCCceEEEEeCCCCcEEEE
Q psy12614 366 LWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSA----VNNATIRCSVVSNDGKYVAY 420 (708)
Q Consensus 366 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~s~~g~~l~~ 420 (708)
||.+.... ........ ........+.|||+|++++.
T Consensus 393 ly~v~~~g-------------------~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~ 432 (740)
T 4a5s_A 393 LYKIQLID-------------------YTKVTCLSCELNPERCQYYSVSFSKEAKYYQL 432 (740)
T ss_dssp EEEEETTE-------------------EEEEEESSTTTSTTTBCBEEEEECTTSSEEEE
T ss_pred EEEEECCC-------------------CCcceeeccccCCCCCceEEEEECCCCCEEEE
Confidence 55544311 01111111 12356788999999998886
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.81 E-value=1.1e-17 Score=167.69 Aligned_cols=273 Identities=10% Similarity=0.001 Sum_probs=181.9
Q ss_pred EEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecC-CceEEEEEecCCCEEEE-EeCCCcEEEEEccCCcEEEEEecc
Q psy12614 77 LTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTS-GTCWCLSVHKKKRLLAA-GTEQGHINLFQISDEGLLYEKLLD 152 (708)
Q Consensus 77 l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~~~~~~~~~~~ 152 (708)
++++ +..+++++.+++|.+||+.+++.+..+..+. ..+..++|+|+++++++ ...++.|.+||+.+++........
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 3455 5677888999999999999999888887543 25789999999987654 456899999999998876322222
Q ss_pred cc----cccEEEEEECCCCCEEEEec-------------CCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC
Q psy12614 153 RQ----QGRILCTAWHSSGDYLVTGC-------------AAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF 215 (708)
Q Consensus 153 ~~----~~~v~~~~~s~d~~~l~~~~-------------~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 215 (708)
.. ...+..++|+|||++|++++ .+.|.+||+.+++....+... .....+.+++|+|||
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-----PMPRQVYLMRAADDG 159 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-----ECCSSCCCEEECTTS
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-----cCCCcccceeECCCC
Confidence 11 23377899999999998877 248999999885443222111 113357889999999
Q ss_pred EEEEEcCCCcEEEEeCCCCeeEEEeecccc------------------------CeEEEEEeCCCCEEEEEec-CCeEEE
Q psy12614 216 TIITGDSGGFVRFWDGKTGVQWSDVKTHKK------------------------DILALTVSEDENYLYCAGV-DPTVVC 270 (708)
Q Consensus 216 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~------------------------~i~~~~~s~~~~~l~~~~~-dg~i~i 270 (708)
++++++ +.|.+||..+++.+..+..+.. ....+++++++........ ...+..
T Consensus 160 ~l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 160 SLYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp CEEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred cEEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 866654 4499999999988777653320 2344666655422211111 112223
Q ss_pred EEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceE
Q psy12614 271 FQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPV 347 (708)
Q Consensus 271 w~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 347 (708)
++..+ ++ ........+...+.+++++ ++.++++ ++.|.+||+.+...............+
T Consensus 238 ~~~~~--------~~-------~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~ 300 (349)
T 1jmx_B 238 VDLKT--------GK-------THTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCV 300 (349)
T ss_dssp EETTT--------CC-------EEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEE
T ss_pred EeccC--------Cc-------EEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccce
Confidence 55554 32 1122223345567777776 5677777 889999999987754333233456789
Q ss_pred EEEcCCcEEEEE-cCCeEEEEEecCCC
Q psy12614 348 SLAKDIQHVLLQ-YTSHLELWSLGSAQ 373 (708)
Q Consensus 348 ~~s~~~~~l~~~-~~~~i~i~~~~~~~ 373 (708)
+++|+++.++++ .++.|.+||..+.+
T Consensus 301 ~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 301 AFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp EECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred EECCCCCEEEEecCCCeEEEEeccccc
Confidence 999999877764 67899999998755
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=1.2e-17 Score=182.68 Aligned_cols=286 Identities=8% Similarity=-0.020 Sum_probs=202.3
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEE--eCCCcEEEEeCCCCCeEEEEEecCCCCCcEE---------EEEEe----CCE-E
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVS--RADQSIEIWDISETPHVDRVFIGDPLSNSIE---------CLTWF----NDR-L 84 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~--~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~---------~l~~~----~~~-l 84 (708)
.+.+|...|..++|++++.+++.. +.++...||....+.... .+..|. ..+. ...|+ |+. |
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~l~~~~--~~~~~~~~~~~~~~~~~~~SPDg~~~l 94 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEE-SALPAP--WNVRNRVFEYSGFPWAGVPRPAGGPLL 94 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEE-ESSCTT--CCBCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcc-eeCCCC--ccccccccccCCccceeeeecCCCeEE
Confidence 466789999999999887677776 557889999965444444 677776 5555 55555 777 6
Q ss_pred EEEc-CCCcEEEEECC--C-CeEeEEEee-----cCCceEEEEEecCCCEEEEEeCC----------CcEEEEEccC---
Q psy12614 85 FSGG-LQGFVNEYDMR--R-LNIKSSTAV-----TSGTCWCLSVHKKKRLLAAGTEQ----------GHINLFQISD--- 142 (708)
Q Consensus 85 ~s~~-~d~~i~vwd~~--~-~~~~~~~~~-----~~~~v~~~~~s~~~~~la~~~~d----------~~i~iwd~~~--- 142 (708)
+.++ .+..|.+|++. + ++ ...+.. |...+.+++|+|||+.|++++.+ ..|++||+.+
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 6554 36677777776 3 33 444554 66788999999999999998876 5899999988
Q ss_pred ---CcEEEEEecc-cccccEEEEEECCCCCEEEEecC--------C-eEEEEEcC-CCc--eEEEEEecccCCCCCceeE
Q psy12614 143 ---EGLLYEKLLD-RQQGRILCTAWHSSGDYLVTGCA--------A-AVRVWDIH-KGH--AIHKMSLDKSSKFSKNTAV 206 (708)
Q Consensus 143 ---~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~~~~~--------d-~i~iwd~~-~~~--~~~~~~~~~~~~~~~~~~v 206 (708)
++. ..+. .+...+..++|||||++|+.++. . .|.+||+. +++ ....+... +...+
T Consensus 174 ~~~~~~---~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~------~~~~~ 244 (662)
T 3azo_A 174 ADRSAV---RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG------PEEAI 244 (662)
T ss_dssp TCGGGS---EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE------TTBCE
T ss_pred ccCCce---eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC------CCceE
Confidence 665 3455 55677889999999999987762 3 79999998 562 33344332 15678
Q ss_pred EEEEEccCCE-EEEEcCCC--cEEEEeCCCCeeEEEeeccccC--------eEEEEEeCCCCEEEEEecCCeEEEEEc--
Q psy12614 207 WCVAFCADFT-IITGDSGG--FVRFWDGKTGVQWSDVKTHKKD--------ILALTVSEDENYLYCAGVDPTVVCFQR-- 273 (708)
Q Consensus 207 ~~~~~~~~~~-l~~~~~dg--~i~~wd~~~~~~~~~~~~~~~~--------i~~~~~s~~~~~l~~~~~dg~i~iw~~-- 273 (708)
..++|+|||+ +++++.++ .|.+||+.+++.......+... +..++|+|++++++++.. +.+++|.+
T Consensus 245 ~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~ 323 (662)
T 3azo_A 245 AQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDP 323 (662)
T ss_dssp EEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEET
T ss_pred cceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEEC
Confidence 9999999997 55666777 6777887677665544433222 567899999999999988 99999944
Q ss_pred cCCcccccCCCCCCCCcceEEeEEEeccccceEEE-EEeCCE-EEE-EcCCC--eEEEEeCCCCceeec
Q psy12614 274 TRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSL-ALHGNR-LYS-GGLDS--YLSLSYYPPKTLVKY 337 (708)
Q Consensus 274 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l-~~~~~~-l~s-~~~d~--~i~iw~~~~~~~~~~ 337 (708)
.+ + ....+..|...+..+ +++++. +++ ++.+. .+.++++.++....+
T Consensus 324 ~~--------~---------~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 324 ES--------G---------ELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp TT--------T---------EEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred CC--------C---------cEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 44 3 345566777778877 677443 333 34444 455667767665544
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=3.7e-17 Score=161.49 Aligned_cols=239 Identities=12% Similarity=0.008 Sum_probs=183.3
Q ss_pred CCcEEEEEEcCCCCEEEEEeCC------------------------CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-
Q psy12614 26 PKVINCIACEPKSSRLAVSRAD------------------------QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF- 80 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~d------------------------g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~- 80 (708)
-+.+.+++++|+|+++++...+ +.|.+||..+++.+...-.++. .....++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~--~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLF--YLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTC--SSEEEEEECT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCcc--CCceEEEECC
Confidence 4679999999999999888776 4799999999887652223444 689999999
Q ss_pred -CCEEEEEcCCCcEEEEECCCCe-EeEEEe---------ecCCceEEEEEec-CCCEEEEEe-CCCcEEEEEccCCcEEE
Q psy12614 81 -NDRLFSGGLQGFVNEYDMRRLN-IKSSTA---------VTSGTCWCLSVHK-KKRLLAAGT-EQGHINLFQISDEGLLY 147 (708)
Q Consensus 81 -~~~l~s~~~d~~i~vwd~~~~~-~~~~~~---------~~~~~v~~~~~s~-~~~~la~~~-~d~~i~iwd~~~~~~~~ 147 (708)
|+.+++...++.|++||..... .+..+. .+-.....++++| ++.++++.+ .++.|++|+ .++...
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~- 178 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFV- 178 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEE-
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEE-
Confidence 7778888889999999986643 455552 3344689999999 788777775 689999999 455554
Q ss_pred EEecc----------cccccEEEEEECCC-CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC
Q psy12614 148 EKLLD----------RQQGRILCTAWHSS-GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF 215 (708)
Q Consensus 148 ~~~~~----------~~~~~v~~~~~s~d-~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 215 (708)
..+. ++-.....++++|+ +..+++...+ .|++||..+|+.+..+... .....+..++|+| +
T Consensus 179 -~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~-----~~~~~~~~~~~~p-g 251 (329)
T 3fvz_A 179 -TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA-----SFGRNVFAISYIP-G 251 (329)
T ss_dssp -EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT-----TTTTCEEEEEEET-T
T ss_pred -EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc-----ccCCCcceeeecC-C
Confidence 3332 12234889999999 6666666666 9999999989998887644 2356688999999 5
Q ss_pred E-EEE-------EcCCCcEEEEeCCCCeeEEEee---ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 216 T-IIT-------GDSGGFVRFWDGKTGVQWSDVK---THKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 216 ~-l~~-------~~~dg~i~~wd~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
. +++ ...+..|++||..+++.+..+. ++...+..++++|+|+.+++...++.|++|++..
T Consensus 252 ~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 252 FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 3 222 2334589999999999988873 5667789999999997777888889999999875
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.78 E-value=5.9e-16 Score=149.88 Aligned_cols=238 Identities=10% Similarity=0.108 Sum_probs=175.6
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEe------cCCCCCcEEEEEEe--CCEEEEEc-C-CCcE
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFI------GDPLSNSIECLTWF--NDRLFSGG-L-QGFV 93 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~------~h~~~~~v~~l~~~--~~~l~s~~-~-d~~i 93 (708)
++-..+.+++++|+++++++...++.|.+||.. ++.+. .+. ++. ..+.++++. +..|++++ . ++.|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~-~~~~~~~~~~~~--~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKF-QFGECGKRDSQL--LYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEE-EECCBSSSTTCB--SSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEE-EecccCCCcccc--cCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 455789999999999988888888999999987 55444 443 233 578999994 45555554 3 8999
Q ss_pred EEEECCCCeEeEEEe-ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEE
Q psy12614 94 NEYDMRRLNIKSSTA-VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVT 172 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~ 172 (708)
.+|| .+++.+..+. .+...+.+++++|+|+++++...++.|.+||.. ++.........+...+..++++|+|+.+++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEE
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEE
Confidence 9999 5667666664 334578999999999988777778999999965 444321222234456899999999997777
Q ss_pred ecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEE-EEEcCCC-cEEEEeCCCCeeEEEeecccc--Ce
Q psy12614 173 GCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTI-ITGDSGG-FVRFWDGKTGVQWSDVKTHKK--DI 247 (708)
Q Consensus 173 ~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~~~~dg-~i~~wd~~~~~~~~~~~~~~~--~i 247 (708)
...+ .|.+||. +++.+..+... +....+..++++++|++ ++...++ .|.+||. +++.+..+..+.. .+
T Consensus 181 ~~~~~~i~~~~~-~g~~~~~~~~~-----g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~ 253 (286)
T 1q7f_A 181 DNRAHCVKVFNY-EGQYLRQIGGE-----GITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQC 253 (286)
T ss_dssp EGGGTEEEEEET-TCCEEEEESCT-----TTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCE
T ss_pred ECCCCEEEEEcC-CCCEEEEEccC-----CccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcc
Confidence 7767 9999997 56666555432 11356889999999974 4555555 9999995 5777777665433 47
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.+++++|+|+++++ +.++.|++|+...
T Consensus 254 ~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 254 FDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred eeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 79999999976666 6799999999865
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.78 E-value=1.6e-16 Score=159.70 Aligned_cols=274 Identities=11% Similarity=0.073 Sum_probs=178.7
Q ss_pred EEEEEeCC--CcEEEEeC--CCCCeEEE-EEe-cCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECC-CCeEeEEEeec
Q psy12614 40 RLAVSRAD--QSIEIWDI--SETPHVDR-VFI-GDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMR-RLNIKSSTAVT 110 (708)
Q Consensus 40 ~la~~~~d--g~v~iwd~--~~~~~~~~-~~~-~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~-~~~~~~~~~~~ 110 (708)
+|++|+.. +.|.+|++ .+++.... ... +.. ..+..++|+ +++|++++.+ .|.+|++. +++........
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~--~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~ 80 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQD--EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHP 80 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTT--CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCC--CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEee
Confidence 45666653 46887765 45554221 111 233 468889999 8889988888 99999997 77765443321
Q ss_pred -CCceEEEEEecCCCE--EEEEe-------------CCCcEEEEEcc-CCcEEEEEecc--cccccEEEEEECCCCCEEE
Q psy12614 111 -SGTCWCLSVHKKKRL--LAAGT-------------EQGHINLFQIS-DEGLLYEKLLD--RQQGRILCTAWHSSGDYLV 171 (708)
Q Consensus 111 -~~~v~~~~~s~~~~~--la~~~-------------~d~~i~iwd~~-~~~~~~~~~~~--~~~~~v~~~~~s~d~~~l~ 171 (708)
.+.+.+++|+|||++ ++++. .++.+.+|++. .++........ .+...+.+++|+|||++|+
T Consensus 81 ~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~ 160 (365)
T 1jof_A 81 IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred cCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEE
Confidence 134667899999994 44543 68999999997 46554211111 2456789999999999988
Q ss_pred EecC-C-eEEEEEcC-CCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc-CCCcEEEEeCC--CCeeE---EE--
Q psy12614 172 TGCA-A-AVRVWDIH-KGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD-SGGFVRFWDGK--TGVQW---SD-- 239 (708)
Q Consensus 172 ~~~~-d-~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~dg~i~~wd~~--~~~~~---~~-- 239 (708)
++.. + .|.+|++. +++.......... .+...+..++|+|||+ +++++ .++.|.+|++. +++.. ..
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~---~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~ 237 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAP---DPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFP 237 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECS---STTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEE
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEecC---CCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEE
Confidence 7764 4 99999998 7765322111100 0145688999999995 55554 47899998764 56542 12
Q ss_pred -eec----ccc------CeEEEE-EeCCCCEEEEEecCC------eEEEEEcc-CCcccccCCCCCCCCcceEEeE-EEe
Q psy12614 240 -VKT----HKK------DILALT-VSEDENYLYCAGVDP------TVVCFQRT-RKPQVCSTSGPEQGSSVWVRSV-NRV 299 (708)
Q Consensus 240 -~~~----~~~------~i~~~~-~s~~~~~l~~~~~dg------~i~iw~~~-~~~~~~~~~g~~~~~~~~~~~~-~~~ 299 (708)
+.. |.. .+..++ |+|||++|++++.+. .|.+|++. + |+ ..... ...
T Consensus 238 ~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~--------g~------~~~~~~~~~ 303 (365)
T 1jof_A 238 LIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDC--------GS------IEKQLFLSP 303 (365)
T ss_dssp SSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTT--------SC------EEEEEEEEE
T ss_pred cCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCC--------CC------EEEeeeeee
Confidence 221 121 478999 999999998776533 89999996 4 43 11111 122
Q ss_pred ccccceEEEEEe-----CCEEEEEcCC-CeEEEEeCCCCc
Q psy12614 300 IHEGDVKSLALH-----GNRLYSGGLD-SYLSLSYYPPKT 333 (708)
Q Consensus 300 ~~~~~v~~l~~~-----~~~l~s~~~d-~~i~iw~~~~~~ 333 (708)
.+...+..++++ +++|++++.+ +.|.+|+++...
T Consensus 304 ~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 304 TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred cCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh
Confidence 344445556654 6788888764 899999987654
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.77 E-value=2.8e-16 Score=156.72 Aligned_cols=283 Identities=11% Similarity=0.069 Sum_probs=193.7
Q ss_pred CCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC----------CCcEEEEEccCCcEEEEEeccc----c
Q psy12614 89 LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE----------QGHINLFQISDEGLLYEKLLDR----Q 154 (708)
Q Consensus 89 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~----------d~~i~iwd~~~~~~~~~~~~~~----~ 154 (708)
.|+.|.+||..+++.+..+..+..+ .++|+|||++++++.. ++.|.+||..+.+.+....+.. +
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 4789999999999988888765554 8999999999998863 5779999999888763322221 1
Q ss_pred cccEEEEEECCCCCEEEEecC--C-eEEEEEcCCCceEEE-EEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEE
Q psy12614 155 QGRILCTAWHSSGDYLVTGCA--A-AVRVWDIHKGHAIHK-MSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRF 228 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~~~~--d-~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~ 228 (708)
......++|+|||++|+++.. + .|.+||+.+++.+.. +... ....+.+.|++ .+++.+.||.+.+
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~---------~~~~v~~~p~~~~~~~~~~~dg~~~~ 177 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA---------GCWSVIPQPNRPRSFMTICGDGGLLT 177 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT---------TEEEEEECTTSSSEEEEEETTSSEEE
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC---------CcceeEEcCCCCeeEEEECCCCcEEE
Confidence 234567999999999998763 5 899999999988776 4432 12335677876 4888889999999
Q ss_pred EeCCC-CeeEEE------eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec-
Q psy12614 229 WDGKT-GVQWSD------VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI- 300 (708)
Q Consensus 229 wd~~~-~~~~~~------~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~- 300 (708)
|+... ++.... +.....+ ..+.+++++..++..+.++.+.++|+.. +. ........+..
T Consensus 178 v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~--------~~----~~~~~~~~~~~~ 244 (361)
T 2oiz_A 178 INLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSG--------DE----VKVDGPWSLLND 244 (361)
T ss_dssp EEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSS--------SS----CEEEEEEESCCH
T ss_pred EEECCCCcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCeEEEEEecC--------CC----ceecccccccCc
Confidence 99865 554422 1222222 2334467787888888899999999876 32 11100000000
Q ss_pred ---c----ccceEEEEEe--CCEEEEEcC-----------CCeEEEEeCCCCce-eecCccCCCCceEEEEcCCcEEEEE
Q psy12614 301 ---H----EGDVKSLALH--GNRLYSGGL-----------DSYLSLSYYPPKTL-VKYPCTLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 301 ---~----~~~v~~l~~~--~~~l~s~~~-----------d~~i~iw~~~~~~~-~~~~~~~~~~~~~~~s~~~~~l~~~ 359 (708)
+ ......++++ ++.++.+.. .+.|.+||+.+.+. ..+.. .. +..++++|||++++++
T Consensus 245 ~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~-~~-p~~ia~spdg~~l~v~ 322 (361)
T 2oiz_A 245 EDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG-RD-ALSMTIDQQRNLMLTL 322 (361)
T ss_dssp HHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC-TT-CCEEEEETTTTEEEEE
T ss_pred cccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec-CC-eeEEEECCCCCEEEEe
Confidence 0 0111125666 566665532 35899999998874 44442 23 8899999999999987
Q ss_pred cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc
Q psy12614 360 YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK 416 (708)
Q Consensus 360 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 416 (708)
..+.|.+||..++. .++.............++++|+|.
T Consensus 323 n~~~v~v~D~~t~~-------------------l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 323 DGGNVNVYDISQPE-------------------PKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CSSCEEEEECSSSS-------------------CEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCCeEEEEECCCCc-------------------ceeeEEeccCCCCcEEEEecCCCC
Confidence 66999999999862 023333334556678899999985
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.76 E-value=3.2e-17 Score=167.37 Aligned_cols=292 Identities=8% Similarity=-0.079 Sum_probs=195.2
Q ss_pred EEEECCCCeEeEEEeecCCc-----eEEEEEecCCCEEEEEeCC---CcEEEEEccCCcEEEEEecccccccE-EEEEEC
Q psy12614 94 NEYDMRRLNIKSSTAVTSGT-----CWCLSVHKKKRLLAAGTEQ---GHINLFQISDEGLLYEKLLDRQQGRI-LCTAWH 164 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~la~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~v-~~~~~s 164 (708)
...|..+++.+..+..+... +.+++|+|||++|+..... ..|++||+.+++.. .+..+.... ..+.|+
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~---~l~~~~~~~~~~~~~s 89 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV---QLTEGKGDNTFGGFIS 89 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE---ECCCSSCBCTTTCEEC
T ss_pred eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE---EeecCCCCccccceEC
Confidence 34577888877777655433 7788999999998887553 46889999988764 333333333 347899
Q ss_pred CCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEE-------------------EEEccCCE-EEEE---
Q psy12614 165 SSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWC-------------------VAFCADFT-IITG--- 220 (708)
Q Consensus 165 ~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~-l~~~--- 220 (708)
|||++|+.++.+ .|.+||+.+++........ ...... +.|+|+++ ++..
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~-------~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 162 (396)
T 3c5m_A 90 TDERAFFYVKNELNLMKVDLETLEEQVIYTVD-------EEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY 162 (396)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECC-------TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH
T ss_pred CCCCEEEEEEcCCcEEEEECCCCCcEEEEecc-------cccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec
Confidence 999999999888 9999999988765544422 111111 34567775 3322
Q ss_pred --cCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeC-CCCEEEEEecC------CeEEEEEccCCcccccCCCCCCCCcc
Q psy12614 221 --DSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE-DENYLYCAGVD------PTVVCFQRTRKPQVCSTSGPEQGSSV 291 (708)
Q Consensus 221 --~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~g~~~~~~~ 291 (708)
..+..|++||+.+++..... .+...+..+.|+| +++.|+..+.+ ..|.+|++.. ++
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--------~~------ 227 (396)
T 3c5m_A 163 HTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG--------SN------ 227 (396)
T ss_dssp HTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS--------CC------
T ss_pred cCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCC--------Cc------
Confidence 45678999999888765444 4667889999999 78877766543 3588888866 32
Q ss_pred eEEeEEEecc--ccceEEEEEe--CCEEEEEcCC-----CeEEEEeCCCCceeecCccCCCCceEEEEc-CCcEEEEEc-
Q psy12614 292 WVRSVNRVIH--EGDVKSLALH--GNRLYSGGLD-----SYLSLSYYPPKTLVKYPCTLAQSTPVSLAK-DIQHVLLQY- 360 (708)
Q Consensus 292 ~~~~~~~~~~--~~~v~~l~~~--~~~l~s~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~- 360 (708)
...+..+ ...+..++|+ ++.|+.++.+ +.|.+||+.++....+. ...... ..++| +|++++...
T Consensus 228 ---~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~-~~~s~~dg~~l~~~~~ 302 (396)
T 3c5m_A 228 ---VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM-VMPPCS-HLMSNFDGSLMVGDGC 302 (396)
T ss_dssp ---CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE-ECCSEE-EEEECSSSSEEEEEEC
T ss_pred ---eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee-eCCCCC-CCccCCCCceEEEecC
Confidence 1222222 2357778898 7767666543 45999999887654443 122222 88999 999888642
Q ss_pred ----------------CCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCC-----------ceEEEEeCC
Q psy12614 361 ----------------TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNA-----------TIRCSVVSN 413 (708)
Q Consensus 361 ----------------~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~i~~~~~s~ 413 (708)
+..|.+|++.++. ...+. .+.. .+..++|+|
T Consensus 303 ~~p~~~~~~~~~~~~~~~~i~~~d~~~~~---------------------~~~l~-~~~~~~~~~~~~~~~~~~~~~~s~ 360 (396)
T 3c5m_A 303 DAPVDVADADSYNIENDPFLYVLNTKAKS---------------------AQKLC-KHSTSWDVLDGDRQITHPHPSFTP 360 (396)
T ss_dssp CC----------CCCCCCEEEEEETTTTB---------------------CCEEE-ECCCCCCCBTTBSSTTCCCCEECT
T ss_pred CcceeeccccccccCCCCcEEEEecccCc---------------------eEEcc-CCCCccccccccccCCCCCceEcc
Confidence 3679999987654 11111 1222 245678999
Q ss_pred CCcEEEE-Ec-CCceEEEEEEecCCc
Q psy12614 414 DGKYVAY-ST-ESCVRLHSLDLDGDK 437 (708)
Q Consensus 414 ~g~~l~~-~~-d~~i~i~~~~~~~~~ 437 (708)
||+.|++ +. ++...+|.++...+.
T Consensus 361 dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 361 NDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp TSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred CCCeEEEEecCCCCceEEEEEEcccc
Confidence 9999887 43 677788887754443
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=5.1e-16 Score=169.89 Aligned_cols=279 Identities=9% Similarity=-0.056 Sum_probs=185.4
Q ss_pred EEecCCCCCcEEEEEEeCCEEE--EE--cCCCcEEEEECCCCeEeEEEeecCCceE---------EEEEe--cCCCE-EE
Q psy12614 64 VFIGDPLSNSIECLTWFNDRLF--SG--GLQGFVNEYDMRRLNIKSSTAVTSGTCW---------CLSVH--KKKRL-LA 127 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~~~~l~--s~--~~d~~i~vwd~~~~~~~~~~~~~~~~v~---------~~~~s--~~~~~-la 127 (708)
.+.+|. ..+..++|+++.++ +. +.++...||....+.....+..+...+. ..+|+ |||++ |+
T Consensus 18 ~~~~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 18 LVASRS--GRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHHTC--SCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HHhhcC--CccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 456777 89999999955444 33 4478899999655555666777766666 66666 99998 77
Q ss_pred EEeC-CCcEEEEEcc--C-CcEEEEEeccc-----ccccEEEEEECCCCCEEEEecCC-----------eEEEEEcCC--
Q psy12614 128 AGTE-QGHINLFQIS--D-EGLLYEKLLDR-----QQGRILCTAWHSSGDYLVTGCAA-----------AVRVWDIHK-- 185 (708)
Q Consensus 128 ~~~~-d~~i~iwd~~--~-~~~~~~~~~~~-----~~~~v~~~~~s~d~~~l~~~~~d-----------~i~iwd~~~-- 185 (708)
.++. +..|+++++. + ++. ..+.. |...+..++|+|||+.|++++.+ .|.+||+.+
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~~---~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 172 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAVP---RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSA 172 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCCC---EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTT
T ss_pred EEECCCCeEEEEcCCCCCCCCC---EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCc
Confidence 7654 5667777766 3 554 34444 66788999999999999987653 799999987
Q ss_pred ----CceEEEEE-ecccCCCCCceeEEEEEEccCCE-EEEEcCC--------CcEEEEeCC-CC---eeEEEeeccccCe
Q psy12614 186 ----GHAIHKMS-LDKSSKFSKNTAVWCVAFCADFT-IITGDSG--------GFVRFWDGK-TG---VQWSDVKTHKKDI 247 (708)
Q Consensus 186 ----~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d--------g~i~~wd~~-~~---~~~~~~~~~~~~i 247 (708)
++. ..+. .. ...+..++|+|||+ ++.++.+ ..|++||+. ++ +......++...+
T Consensus 173 ~~~~~~~-~~l~~~~-------~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~ 244 (662)
T 3azo_A 173 AADRSAV-RELSDDA-------HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAI 244 (662)
T ss_dssp TTCGGGS-EESSCSC-------SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCE
T ss_pred cccCCce-eEEEecC-------CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceE
Confidence 544 3332 21 45678899999996 6655533 479999998 57 4444445567889
Q ss_pred EEEEEeCCCCEEEEEecCC--eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc--------eEEEEEe--CCEE
Q psy12614 248 LALTVSEDENYLYCAGVDP--TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD--------VKSLALH--GNRL 315 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------v~~l~~~--~~~l 315 (708)
..++|+|||+++++++.++ .|.+|+..+ ++ .......+... +..++++ +.++
T Consensus 245 ~~~~~spdg~l~~~~~~~~~~~l~~~~~~~--------~~--------~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~ 308 (662)
T 3azo_A 245 AQAEWAPDGSLIVATDRTGWWNLHRVDPAT--------GA--------ATQLCRREEEFAGPLWTPGMRWFAPLANGLIA 308 (662)
T ss_dssp EEEEECTTSCEEEEECTTSSCEEEEECTTT--------CC--------EEESSCCSSBSSCCCCSTTCCSEEECTTSCEE
T ss_pred cceEECCCCeEEEEECCCCCeEEEEEECCC--------Cc--------eeecccccccccCccccccCceEeEeCCCEEE
Confidence 9999999999888888888 566666655 42 11111122111 4567776 7788
Q ss_pred EEEcCCCeEEEE--eCCCCceeecCccCCCCceEEEEcCCcEEEE--E-cCCeEEEE--EecCCC
Q psy12614 316 YSGGLDSYLSLS--YYPPKTLVKYPCTLAQSTPVSLAKDIQHVLL--Q-YTSHLELW--SLGSAQ 373 (708)
Q Consensus 316 ~s~~~d~~i~iw--~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~--~-~~~~i~i~--~~~~~~ 373 (708)
+++.. +.+++| ++.++.+..+..+......+ ++++++.++. . .+....+| ++.+++
T Consensus 309 ~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 309 VVHGK-GAAVLGILDPESGELVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp EEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEc-CccEEEEEECCCCcEEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 88888 998998 66666666665333222333 1566654443 3 33334444 544433
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.75 E-value=2.4e-15 Score=150.06 Aligned_cols=289 Identities=9% Similarity=0.058 Sum_probs=200.0
Q ss_pred CCCCEEEEEe------CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc----------CCCcEEEEE
Q psy12614 36 PKSSRLAVSR------ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG----------LQGFVNEYD 97 (708)
Q Consensus 36 ~~~~~la~~~------~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~----------~d~~i~vwd 97 (708)
++++++.+.. .|+.|.+||..+++.+. .+..+. .+ .++|+ +++|++++ .+++|.+||
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~-~i~~g~--~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d 87 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLG-MVPTAF--NG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWD 87 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEE-EEECCE--EE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEE
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEE-EecCCC--CC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEE
Confidence 3666766654 36799999999998876 666655 55 89999 88888886 367899999
Q ss_pred CCCCeEeEEEeec------CCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEe-cccccccEEEEEECCCC-
Q psy12614 98 MRRLNIKSSTAVT------SGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKL-LDRQQGRILCTAWHSSG- 167 (708)
Q Consensus 98 ~~~~~~~~~~~~~------~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~s~d~- 167 (708)
..+++.+..+... ......++|+|||++|+++.. ++.|.+||+.+++.+ .. +.. .+ ...+.+.|++
T Consensus 88 ~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~--~~~i~~-~~-~~~v~~~p~~~ 163 (361)
T 2oiz_A 88 ADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYV--EDVTAA-AG-CWSVIPQPNRP 163 (361)
T ss_dssp TTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEE--EEEGGG-TT-EEEEEECTTSS
T ss_pred CcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEE--EEEecC-CC-cceeEEcCCCC
Confidence 9999988887643 345678999999999998864 588999999999876 44 332 22 2335667776
Q ss_pred CEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCee--EEEeec
Q psy12614 168 DYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQ--WSDVKT 242 (708)
Q Consensus 168 ~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~--~~~~~~ 242 (708)
..+++.+.| .+.+|+... ++..........-+ ....+ ..+.+++++ .++..+.++.|.++|+..+.. ...+..
T Consensus 164 ~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~-~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~ 241 (361)
T 2oiz_A 164 RSFMTICGDGGLLTINLGEDGKVASQSRSKQMFS-VKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSL 241 (361)
T ss_dssp SEEEEEETTSSEEEEEECTTSSEEEEEECCCCSC-TTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEES
T ss_pred eeEEEECCCCcEEEEEECCCCcEeeeccccceEc-CCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccc
Confidence 667777778 899998865 55542222100000 00111 123335666 466677889999999875532 222210
Q ss_pred ------c----ccCeEEEEEeCCCCEEEEEec-----------CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc
Q psy12614 243 ------H----KKDILALTVSEDENYLYCAGV-----------DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH 301 (708)
Q Consensus 243 ------~----~~~i~~~~~s~~~~~l~~~~~-----------dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 301 (708)
+ ......++|+|++++++++.. .+.|.+||..+ ++ ....+..+
T Consensus 242 ~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t--------~~--------~v~~i~~~ 305 (361)
T 2oiz_A 242 LNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT--------KQ--------RVARIPGR 305 (361)
T ss_dssp CCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT--------TE--------EEEEEECT
T ss_pred cCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC--------Cc--------EEEEEecC
Confidence 0 111223789999988887654 34899999998 65 56666666
Q ss_pred ccceEEEEEe--CCEEEEEcCCCeEEEEeCCCC--cee-ecCccCCCCceEEEEcCCc
Q psy12614 302 EGDVKSLALH--GNRLYSGGLDSYLSLSYYPPK--TLV-KYPCTLAQSTPVSLAKDIQ 354 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~--~~~-~~~~~~~~~~~~~~s~~~~ 354 (708)
. +.+++++ +++|++++. +.|.+||..+. ++. .+......+..++++|+|+
T Consensus 306 ~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 306 D--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp T--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred C--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 6 9999999 888888887 99999999998 533 3333445667899999985
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.75 E-value=3.3e-17 Score=167.24 Aligned_cols=231 Identities=7% Similarity=-0.056 Sum_probs=162.1
Q ss_pred EEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCCeEEEEEecCCCCCcE-EEEEEe--CCEEEEEcCCCcEEEEECCCCe
Q psy12614 29 INCIACEPKSSRLAVSRAD---QSIEIWDISETPHVDRVFIGDPLSNSI-ECLTWF--NDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~~d---g~v~iwd~~~~~~~~~~~~~h~~~~~v-~~l~~~--~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
+.+++|||||++||..... ..|.+||+.+++.. .+..+. ..+ ..+.|+ |++|+.++.++.|.+||+.+++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~--~l~~~~--~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV--QLTEGK--GDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE--ECCCSS--CBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE--EeecCC--CCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 7788999999998887543 36888899887653 344333 333 337888 8899999999999999999988
Q ss_pred EeEEEeecCCceEE-------------------EEEecCCCEEEEE-----eCCCcEEEEEccCCcEEEEEecccccccE
Q psy12614 103 IKSSTAVTSGTCWC-------------------LSVHKKKRLLAAG-----TEQGHINLFQISDEGLLYEKLLDRQQGRI 158 (708)
Q Consensus 103 ~~~~~~~~~~~v~~-------------------~~~s~~~~~la~~-----~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 158 (708)
.......+.+.... ++|+|+++.++.+ ..+..|++||+.+++.. .+..+...+
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~---~~~~~~~~~ 190 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELE---VIHQDTAWL 190 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEE---EEEEESSCE
T ss_pred cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEE---eeccCCccc
Confidence 76666655543333 3567788776654 35678999999988874 233456778
Q ss_pred EEEEECC-CCCEEEEecCC-------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----C
Q psy12614 159 LCTAWHS-SGDYLVTGCAA-------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----G 224 (708)
Q Consensus 159 ~~~~~s~-d~~~l~~~~~d-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g 224 (708)
..+.|+| +++.|+..+.+ .|.+||+..++.. .+... .....+..++|+|||+ ++.++.+ +
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~-----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 264 (396)
T 3c5m_A 191 GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEH-----AEGESCTHEFWIPDGSAMAYVSYFKGQTDR 264 (396)
T ss_dssp EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCC-----CTTEEEEEEEECTTSSCEEEEEEETTTCCE
T ss_pred ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-Eeecc-----CCCccccceEECCCCCEEEEEecCCCCccc
Confidence 9999999 88877766543 4788887655432 22211 1134688899999996 6655433 3
Q ss_pred cEEEEeCCCCeeEEEeeccccCeEEEEEeC-CCCEEEEEe----------------cCCeEEEEEccC
Q psy12614 225 FVRFWDGKTGVQWSDVKTHKKDILALTVSE-DENYLYCAG----------------VDPTVVCFQRTR 275 (708)
Q Consensus 225 ~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~----------------~dg~i~iw~~~~ 275 (708)
.|++||+.+++....... . ... +.|+| ||+++++++ .++.|++||+.+
T Consensus 265 ~l~~~d~~~g~~~~l~~~-~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 265 VIYKANPETLENEEVMVM-P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp EEEEECTTTCCEEEEEEC-C-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT
T ss_pred eEEEEECCCCCeEEeeeC-C-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc
Confidence 499999988865443221 1 233 88999 999888754 247899999987
No 175
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.74 E-value=7.3e-12 Score=139.38 Aligned_cols=526 Identities=9% Similarity=0.071 Sum_probs=322.3
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCC---cEEEEEEe-CCEEEEEcCCCcEEEEECCCC
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN---SIECLTWF-NDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~---~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~ 101 (708)
...|.++...++|.+.+ |+.+ .+..||..+++... +.... .. .|.++... ...|..++. +.|..||.+++
T Consensus 87 ~n~I~~i~~d~~g~lWi-gT~~-Gl~~yd~~~~~f~~--~~~~~-~~~~~~i~~i~~d~~g~lwi~t~-~gl~~~~~~~~ 160 (795)
T 4a2l_A 87 NDISRIVKTDSQGRVWI-GTRD-GLSRYDEEKDIFQN--FFYEK-NGKHLQVNGIEEISPEQLLISTP-EGLIMFDIKES 160 (795)
T ss_dssp CSCEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEE--ECCEE-TTEECCCCEEEEEETTEEEEEET-TEEEEEETTTT
T ss_pred ccceeEEEECCCCCEEE-EeCC-chheeCCCCCeEEe--ccccc-cCCCceEEEEEECCCCCEEEEEC-CceEEEECCCC
Confidence 35799999999987554 4555 48999998776543 22211 01 18888877 666666665 55899998876
Q ss_pred eEeEEEeec-CCc-eEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEE
Q psy12614 102 NIKSSTAVT-SGT-CWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVR 179 (708)
Q Consensus 102 ~~~~~~~~~-~~~-v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~ 179 (708)
+........ ... |.++...+++.+.+ ++.++.|..|+..+++.... ........|.++...+++.+.+....+.+.
T Consensus 161 ~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~-~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~ 238 (795)
T 4a2l_A 161 KFIDDSFSTAMHKTIASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKV-IPILGTKQIQAILQQSPTRIWVATEGAGLF 238 (795)
T ss_dssp EEECSSSCHHHHTCCEEEEEEETTEEEE-EESSSCEEEEETTTCCEEEC-C----CCCEEEEEEEETTEEEEEEBSSCEE
T ss_pred EEEeccCCCCCCcceEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEe-cCCCCCCeeEEEEEcCCCCEEEEECCCCeE
Confidence 543211111 112 88898888886555 56655589999888776421 111234678888888887655543333899
Q ss_pred EEEcCCCceEEEEEecc-cCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec-------cccCeEEEE
Q psy12614 180 VWDIHKGHAIHKMSLDK-SSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT-------HKKDILALT 251 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-------~~~~i~~~~ 251 (708)
.||..+++... +.... ....-....|.++...++|.+..|+.+ -|.+||..+++....... ....|.++.
T Consensus 239 ~~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 316 (795)
T 4a2l_A 239 LINPKTKEIKN-YLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIF 316 (795)
T ss_dssp EEETTTTEEEE-ECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEE
T ss_pred EEeCCCCeEEE-eecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEE
Confidence 99987765433 32210 000011466999999999987777766 589999877765433211 235799999
Q ss_pred EeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE----eccccceEEEEEe-CCEEEEEcCCCeEEE
Q psy12614 252 VSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR----VIHEGDVKSLALH-GNRLYSGGLDSYLSL 326 (708)
Q Consensus 252 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~v~~l~~~-~~~l~s~~~d~~i~i 326 (708)
..++|+ |..|+.++-|..|+... +. +...... ......|.++... ...|..|+.++-|..
T Consensus 317 ~D~~g~-lWigt~~~Gl~~~~~~~--------~~------~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~ 381 (795)
T 4a2l_A 317 MDSQGG-MWLGTYFGGLNYYHPIR--------NR------FKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNL 381 (795)
T ss_dssp ECTTSC-EEEEESSSCEEEECGGG--------GS------SEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEE
T ss_pred EeCCcC-EEEEECCCCeEEeCCCc--------cc------ceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEE
Confidence 999886 55677777889998765 21 1000000 0123568888888 566777888888999
Q ss_pred EeCCCCceeecCcc---------CCCCceEEEEcCCc-EEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEE
Q psy12614 327 SYYPPKTLVKYPCT---------LAQSTPVSLAKDIQ-HVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIV 396 (708)
Q Consensus 327 w~~~~~~~~~~~~~---------~~~~~~~~~s~~~~-~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (708)
|+..+.....+... ...+.++...++++ +.+...++.+..++..++. +.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~---------------------~~ 440 (795)
T 4a2l_A 382 YNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ---------------------VE 440 (795)
T ss_dssp ECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC---------------------EE
T ss_pred EcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc---------------------EE
Confidence 99887765554311 12334666778898 6666777889999987644 11
Q ss_pred EEEe----cCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecC--CcccccceeEEEEEecCCCeEEEE
Q psy12614 397 KMSA----VNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNL--PAPLFKSIFTHVLISADSTLLLAV 470 (708)
Q Consensus 397 ~~~~----~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~s~d~~~l~~~ 470 (708)
.... .....|.++...++|.+.+... +.+.+|+..+ . .+..+... +.......|.++...++|.+.+..
T Consensus 441 ~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~--~--~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 441 NFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQ--R--SFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp EECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTT--T--EEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred EeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCC--C--eEEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 1111 1245788999988888766655 5577777543 2 23332111 001112467778889998877644
Q ss_pred ecCCc-EEEecCCCeEEEEEecC--CCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceee-ec---CCC-CCCc
Q psy12614 471 SLNGP-LYIIDLSSLEIKYCVDP--YKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA-SL---PRY-RKPS 542 (708)
Q Consensus 471 ~~dg~-i~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~---~~~-~~~v 542 (708)
.+|. .|+.... +. .+.. .........|.++...++|++.+... . -+..||..+... .+ .+. ...|
T Consensus 516 -~~Gl~~~~~~~~--~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~~~~~~gl~~~~i 588 (795)
T 4a2l_A 516 -EEGLSVFKQEGL--DI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIKRYNTTNGLPNNVV 588 (795)
T ss_dssp -SSCEEEEEEETT--EE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEEECGGGTCSCSCE
T ss_pred -CCceEEEeCCCC--eE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEEEeCCCCCCchhhe
Confidence 4554 5665555 32 2221 11111145799999999998666543 3 678888873322 22 122 3468
Q ss_pred eEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcC-CCC--eeEEEeCCCCCceEEEEcCeeEEEE
Q psy12614 543 TAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSR-QLP--VLGIEFDPQDSSLIYLMDDSALCVI 619 (708)
Q Consensus 543 ~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~--i~~l~~s~~~~~l~~~~~d~~i~~w 619 (708)
.++...++|++.+++ . +-|..|+..+++..... ...+- ... ..++...++|. |..++.+| +..+
T Consensus 589 ~~i~~d~~g~lWi~t-~-~Gl~~~~~~~~~~~~~~---------~~dGl~~~~f~~~~~~~~~~G~-l~~g~~~G-l~~~ 655 (795)
T 4a2l_A 589 YGILEDSFGRLWLST-N-RGISCFNPETEKFRNFT---------ESDGLQSNQFNTASYCRTSVGQ-MYFGGING-ITTF 655 (795)
T ss_dssp EEEEECTTSCEEEEE-T-TEEEEEETTTTEEEEEC---------GGGTCSCSCEEEEEEEECTTSC-EEEEETTE-EEEE
T ss_pred EEEEECCCCCEEEEc-C-CceEEEcCCCCcEEEcC---------CcCCCccccCccCceeECCCCe-EEEecCCc-eEEE
Confidence 889998888876644 3 45888998876544111 11111 112 24677788886 56677777 5556
Q ss_pred ecC
Q psy12614 620 NKN 622 (708)
Q Consensus 620 d~~ 622 (708)
+..
T Consensus 656 ~p~ 658 (795)
T 4a2l_A 656 RPE 658 (795)
T ss_dssp CGG
T ss_pred cHH
Confidence 654
No 176
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.73 E-value=8e-14 Score=145.90 Aligned_cols=318 Identities=11% Similarity=0.061 Sum_probs=217.4
Q ss_pred CEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc--CCcEEEEEecccccccEE
Q psy12614 82 DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS--DEGLLYEKLLDRQQGRIL 159 (708)
Q Consensus 82 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~v~ 159 (708)
..+++...+++|.++|..+++.+..+... ..+..++|+|||+++++++.++.|.+||+. +++.+ ..+... ....
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v--~~i~~G-~~P~ 243 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV--AEIKIG-SEAR 243 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE--EEEECC-SEEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe--EEEecC-CCCc
Confidence 45567778999999999999998888743 457799999999999999999999999995 66665 344332 3467
Q ss_pred EEEEC----CCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCC----CCCceeEEEEEEccCC-E-EEEEcCCCcEE
Q psy12614 160 CTAWH----SSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSK----FSKNTAVWCVAFCADF-T-IITGDSGGFVR 227 (708)
Q Consensus 160 ~~~~s----~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~ 227 (708)
.++|+ |||+++++++.. ++.++|..+.+.+..+......- |.....+..+..++++ . ++.....|.|.
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence 99999 699999888765 99999999999998887542100 0002257788889887 3 56667789999
Q ss_pred EEeCCCCeeE--EEeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe-----
Q psy12614 228 FWDGKTGVQW--SDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV----- 299 (708)
Q Consensus 228 ~wd~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~----- 299 (708)
++|..+.+.+ ..+. .......+.|+|++++++++. .++.|.++|..+ ++ ......
T Consensus 324 ~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t--------~k--------l~~~i~vgg~~ 386 (567)
T 1qks_A 324 LVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKE--------GK--------LVAIEDTGGQT 386 (567)
T ss_dssp EEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT--------TE--------EEEEEECSSSS
T ss_pred EEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCC--------Cc--------EEEEEeccCcC
Confidence 9998775432 2232 344567889999999987766 478999999998 53 222222
Q ss_pred ccccceEEEEEe--CC-EEEEEc-CCCeEEEEeCCCC-------c-eeecCccCCCCceEEEEcCCcEEEEEc-------
Q psy12614 300 IHEGDVKSLALH--GN-RLYSGG-LDSYLSLSYYPPK-------T-LVKYPCTLAQSTPVSLAKDIQHVLLQY------- 360 (708)
Q Consensus 300 ~~~~~v~~l~~~--~~-~l~s~~-~d~~i~iw~~~~~-------~-~~~~~~~~~~~~~~~~s~~~~~l~~~~------- 360 (708)
.|.+.-..+ ++ +. ..+++. .++.|.+++..+. + +..+.........+..+|+++.+.+..
T Consensus 387 Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~ 465 (567)
T 1qks_A 387 PHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAE 465 (567)
T ss_dssp BCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHH
T ss_pred CCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcc
Confidence 233222222 23 23 444543 4689999999872 2 344442222334578899999998864
Q ss_pred -CCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE-----ecCCCceEEEEeCCCCcEEEEE------cCCceEE
Q psy12614 361 -TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS-----AVNNATIRCSVVSNDGKYVAYS------TESCVRL 428 (708)
Q Consensus 361 -~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~s~~g~~l~~~------~d~~i~i 428 (708)
.++|.++|+.+.+ ..|.. ...+.+.+. ......+..+.|+|+|+++.++ .++.|.|
T Consensus 466 ~~~~v~v~d~~~~~---~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v 533 (567)
T 1qks_A 466 ISGSVAVFDIKAMT---GDGSD---------PEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVV 533 (567)
T ss_dssp HHTCEEEEEGGGCC---CSSSC---------CCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEE
T ss_pred cCceEEEEECCccc---ccccC---------CCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEE
Confidence 3589999998751 00000 000111110 1124578899999999988874 2688999
Q ss_pred EEEEe
Q psy12614 429 HSLDL 433 (708)
Q Consensus 429 ~~~~~ 433 (708)
+|..+
T Consensus 534 ~D~~t 538 (567)
T 1qks_A 534 VDDKT 538 (567)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 88765
No 177
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.73 E-value=1.8e-15 Score=147.26 Aligned_cols=237 Identities=11% Similarity=-0.019 Sum_probs=175.5
Q ss_pred eeeccCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEE
Q psy12614 19 IKFYAPEPKVINCIACEPKSS-RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNE 95 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~-~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~v 95 (708)
.+.+..+.....+++|+|+|+ +++++..++.|..||..++ .. .+..+. ..+.+++++ |+.+++...++.|.+
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~-~~~~~~--~~~~~l~~~~dg~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LS-PEMHPS--HHQNGHCLNKQGHLIACSHGLRRLER 94 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EE-EEESSC--SSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eE-EEECCC--CCcceeeECCCCcEEEEecCCCeEEE
Confidence 344556677788999999998 7788888899999999987 33 666666 789999998 777666667799999
Q ss_pred EECCCCeEeEEEeec----CCceEEEEEecCCCEEEEE----e-------------CCCcEEEEEccCCcEEEEEecccc
Q psy12614 96 YDMRRLNIKSSTAVT----SGTCWCLSVHKKKRLLAAG----T-------------EQGHINLFQISDEGLLYEKLLDRQ 154 (708)
Q Consensus 96 wd~~~~~~~~~~~~~----~~~v~~~~~s~~~~~la~~----~-------------~d~~i~iwd~~~~~~~~~~~~~~~ 154 (708)
||..+++........ ...+..++++|+|+++++. + ..+.|..++.. ++.. .+..+
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~---~~~~~ 170 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS---APIRD 170 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE---EEECC
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE---EeecC
Confidence 999888765443322 2346789999999988873 2 12455555554 4442 33445
Q ss_pred cccEEEEEECCCCCEEEEecCC-eEEEEEcC-CCce---EEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEE
Q psy12614 155 QGRILCTAWHSSGDYLVTGCAA-AVRVWDIH-KGHA---IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFW 229 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~w 229 (708)
......++|+||++.+++.+.+ .|.+|++. +++. ...+ . .....+..+++.++|++.++. ++.|.+|
T Consensus 171 ~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~------~~~~~p~~i~~d~~G~l~v~~-~~~v~~~ 242 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-T------VEPGKTDGLRVDAGGLIWASA-GDGVHVL 242 (296)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-C------CSSSCCCSEEEBTTSCEEEEE-TTEEEEE
T ss_pred CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-e------CCCCCCCeEEECCCCCEEEEc-CCeEEEE
Confidence 5677899999999999777777 99999997 5554 2222 1 114556789999999866666 8899999
Q ss_pred eCCCCeeEEEeeccccCeEEEEE-eCCCCEEEEEecCCeEEEEEccC
Q psy12614 230 DGKTGVQWSDVKTHKKDILALTV-SEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 230 d~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
|.. ++.+..+..+.. +.+++| .|+++.|++++.+ .+..++..+
T Consensus 243 ~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~ 286 (296)
T 3e5z_A 243 TPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNV 286 (296)
T ss_dssp CTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSC
T ss_pred CCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEccc
Confidence 986 888888877766 899999 5899999988875 455555555
No 178
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.72 E-value=1.4e-11 Score=137.08 Aligned_cols=516 Identities=10% Similarity=0.104 Sum_probs=317.8
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCC------CCCcEEEEEEe-CCEEEEEcCCCcEEEEEC
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDP------LSNSIECLTWF-NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~------~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~ 98 (708)
...|.+++-.++|. |-.|+.+| +..||-.+ .. .+.... ....|.+|... ...|..++.+| +..||.
T Consensus 42 ~n~v~~I~qD~~G~-lWigT~~G-L~ryDG~~---f~-~~~~~~~~~~~l~~n~I~~i~~d~~g~lWigT~~G-l~~yd~ 114 (795)
T 4a2l_A 42 QSTVFSIDQDKRGN-MWFATYDG-VNKYDGYA---FT-VYQHNEDDPNSIANDISRIVKTDSQGRVWIGTRDG-LSRYDE 114 (795)
T ss_dssp SSCEEEEEECTTSC-EEEEETTE-EEEECSSC---EE-EECCCTTCTTSCSCSCEEEEEECTTSCEEEEESSC-EEEEET
T ss_pred cceeEEEEEcCCCC-EEEeecCc-CcccCCCc---eE-EEeCCCCCCCcccccceeEEEECCCCCEEEEeCCc-hheeCC
Confidence 36799999999985 44666665 67777442 21 332110 12579999888 56677777655 899998
Q ss_pred CCCeEeEEEeecCC---ceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccc-ccc-EEEEEECCCCCEEEEe
Q psy12614 99 RRLNIKSSTAVTSG---TCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQ-QGR-ILCTAWHSSGDYLVTG 173 (708)
Q Consensus 99 ~~~~~~~~~~~~~~---~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~-v~~~~~s~d~~~l~~~ 173 (708)
.+.+.......... .|.++...++|.+.+. +. +.|..||..+++.. ...... ... |.++...+++...+ +
T Consensus 115 ~~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~-t~-~gl~~~~~~~~~~~--~~~~~~~~~~~i~~i~~d~~g~lwi-g 189 (795)
T 4a2l_A 115 EKDIFQNFFYEKNGKHLQVNGIEEISPEQLLIS-TP-EGLIMFDIKESKFI--DDSFSTAMHKTIASTLYRQGDQIYI-G 189 (795)
T ss_dssp TTTEEEEECCEETTEECCCCEEEEEETTEEEEE-ET-TEEEEEETTTTEEE--CSSSCHHHHTCCEEEEEEETTEEEE-E
T ss_pred CCCeEEeccccccCCCceEEEEEECCCCCEEEE-EC-CceEEEECCCCEEE--eccCCCCCCcceEEEEECCCCCEEE-E
Confidence 87664332211111 1889999888876554 44 45899998877653 111111 123 88888888886555 5
Q ss_pred cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec-------ccc
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT-------HKK 245 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-------~~~ 245 (708)
+.+ .|..|+..+++........ ....|.++...+++.+..++.++.|..||..+++....... ...
T Consensus 190 t~~~Gl~~~~~~~~~~~~~~~~~------~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~ 263 (795)
T 4a2l_A 190 TSTDGLYTYSITQKTFEKVIPIL------GTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSN 263 (795)
T ss_dssp ESSSCEEEEETTTCCEEECC----------CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCS
T ss_pred ECCCCEEEEeCCCCeEEEecCCC------CCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCC
Confidence 555 8999998777654321111 14568889888899877777665699999887655433221 135
Q ss_pred CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe--------ccccceEEEEEe-CCEEE
Q psy12614 246 DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV--------IHEGDVKSLALH-GNRLY 316 (708)
Q Consensus 246 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------~~~~~v~~l~~~-~~~l~ 316 (708)
.|.++...++|...+ |+.+ -|.+|+..+ +. ...+. .....|.++... ...|.
T Consensus 264 ~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~--------~~---------~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW 324 (795)
T 4a2l_A 264 YIRSLAMDSQNRLWI-GTFN-DLNIYHEGT--------DS---------FASYSSNPVENGSLSQRSVRSIFMDSQGGMW 324 (795)
T ss_dssp BEEEEEECTTSCEEE-EESS-CEEEEETTT--------TE---------EEEECCCTTSTTSCSSSCEEEEEECTTSCEE
T ss_pred eEEEEEEcCCCCEEE-EeCC-hhheEcCCC--------Ce---------EEEEecCCCCCCCCCCCcEEEEEEeCCcCEE
Confidence 689999998886554 5545 588898776 32 11111 123568888888 66677
Q ss_pred EEcCCCeEEEEeCCCCceeecCc-------cCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCC
Q psy12614 317 SGGLDSYLSLSYYPPKTLVKYPC-------TLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLL 389 (708)
Q Consensus 317 s~~~d~~i~iw~~~~~~~~~~~~-------~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 389 (708)
.|+.++-|..++..+.....+.. ....+.++...++|.+.+...++.|..|+..++.
T Consensus 325 igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~---------------- 388 (795)
T 4a2l_A 325 LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQR---------------- 388 (795)
T ss_dssp EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCC----------------
T ss_pred EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCc----------------
Confidence 78888888898876655433321 0112345666778888887777789998877643
Q ss_pred CCceEEEEEEe--------cCCCceEEEEeCCCCc-EEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEE
Q psy12614 390 SFPRLIVKMSA--------VNNATIRCSVVSNDGK-YVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLI 460 (708)
Q Consensus 390 ~~~~~~~~~~~--------~~~~~i~~~~~s~~g~-~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 460 (708)
...... -....|.+++..++|. +.+...++.+..|+..+ +. +..+...........|.++..
T Consensus 389 -----~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~--~~--~~~~~~~~~~l~~~~v~~i~~ 459 (795)
T 4a2l_A 389 -----FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS--GQ--VENFNQRNSQLVNENVYAILP 459 (795)
T ss_dssp -----EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTT--CC--EEEECTTTSCCSCSCEEEEEE
T ss_pred -----EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCC--Cc--EEEeecCCCCcCCCeeEEEEE
Confidence 111110 1246788999989998 44444467788887654 22 232211111111336777888
Q ss_pred ecCCCeEEEEecCCc-EEEecCCCeEEEEEecCC--CCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceeeecC-
Q psy12614 461 SADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPY--KSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHASLP- 536 (708)
Q Consensus 461 s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~- 536 (708)
.++|.+.+. +.+|. +|+..++ +. ..+... ........|.++...++|++.+... +-+..|+..+....+.
T Consensus 460 d~~g~lwig-t~~Gl~~~~~~~~--~~-~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~~~~~ 533 (795)
T 4a2l_A 460 DGEGNLWLG-TLSALVRFNPEQR--SF-TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDIQKAS 533 (795)
T ss_dssp CSSSCEEEE-ESSCEEEEETTTT--EE-EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEEEECC
T ss_pred CCCCCEEEE-ecCceeEEeCCCC--eE-EEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeEEEec
Confidence 888886664 44554 5554444 22 222211 0000135789999999998776554 5688888763322222
Q ss_pred ------CCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhc-CCCCeeEEEeCCCCCceEE
Q psy12614 537 ------RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLS-RQLPVLGIEFDPQDSSLIY 609 (708)
Q Consensus 537 ------~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~s~~~~~l~~ 609 (708)
.....|.++...++|++.+ ++.. -|..||..+++..... ...+ ....|.++...++|...+.
T Consensus 534 ~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~d~~~~~~~~~~---------~~~gl~~~~i~~i~~d~~g~lWi~ 602 (795)
T 4a2l_A 534 ILPVSNVTKLFTNCIYEASNGIIWV-GTRE-GFYCFNEKDKQIKRYN---------TTNGLPNNVVYGILEDSFGRLWLS 602 (795)
T ss_dssp CSCSCGGGGSCEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEEC---------GGGTCSCSCEEEEEECTTSCEEEE
T ss_pred CCCCCCCCCCeeEEEEECCCCCEEE-EeCC-CceeECCCCCcEEEeC---------CCCCCchhheEEEEECCCCCEEEE
Confidence 1235688999988888665 4444 5889998877544211 1111 2346889999998875544
Q ss_pred EEcCeeEEEEecC
Q psy12614 610 LMDDSALCVINKN 622 (708)
Q Consensus 610 ~~~d~~i~~wd~~ 622 (708)
+ .. .|..||..
T Consensus 603 t-~~-Gl~~~~~~ 613 (795)
T 4a2l_A 603 T-NR-GISCFNPE 613 (795)
T ss_dssp E-TT-EEEEEETT
T ss_pred c-CC-ceEEEcCC
Confidence 4 44 46777765
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=8e-15 Score=145.46 Aligned_cols=263 Identities=13% Similarity=0.042 Sum_probs=187.2
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEe
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIK 104 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~ 104 (708)
..|.+++|+|++..++....++.++.| .+.... .+.++. ..+.+++|+ ++.++++..++.|.+||.++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~--~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~ 79 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWL-EISKKG--LQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK 79 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEE-EEESSC--CCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeE-EEeccC--ccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE
Confidence 457788999998888777778899999 333343 666676 778999999 676677888999999999988776
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEeCC----CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC-----
Q psy12614 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQ----GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA----- 175 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~----- 175 (708)
.....+...+.+++++|+|+++++...+ +.|.+||..++..........+...+..++++|+|+.+++...
T Consensus 80 ~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~ 159 (333)
T 2dg1_A 80 RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTN 159 (333)
T ss_dssp EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTB
T ss_pred EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccC
Confidence 6554566789999999999988776666 6899999988876421111234467899999999998887653
Q ss_pred -C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E-EEEcCCCcEEEEeCCC-CeeEEE--------eec
Q psy12614 176 -A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I-ITGDSGGFVRFWDGKT-GVQWSD--------VKT 242 (708)
Q Consensus 176 -d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~i~~wd~~~-~~~~~~--------~~~ 242 (708)
. .|..+|..+++... +... ...+..++|+|+|+ + ++...++.|.+||..+ +..+.. +.+
T Consensus 160 ~~~~l~~~~~~~~~~~~-~~~~-------~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~ 231 (333)
T 2dg1_A 160 PLGGVYYVSPDFRTVTP-IIQN-------ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTG 231 (333)
T ss_dssp CCEEEEEECTTSCCEEE-EEEE-------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCS
T ss_pred CCceEEEEeCCCCEEEE-eecC-------CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCC
Confidence 3 56667765555433 2211 33478899999985 4 4555678999999863 332221 111
Q ss_pred cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc------ceEEEEEe--CCE
Q psy12614 243 HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG------DVKSLALH--GNR 314 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~v~~l~~~--~~~ 314 (708)
+ ..+..++++++|+++++...++.|.+|+... + ....+..+.. .+.+++|+ ++.
T Consensus 232 ~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g---------~--------~~~~~~~~~~~~g~~~~~~~~~~~~dg~~ 293 (333)
T 2dg1_A 232 H-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRG---------Y--------PIGQILIPGRDEGHMLRSTHPQFIPGTNQ 293 (333)
T ss_dssp S-SEEEEEEEBTTCCEEEEEETTTEEEEECTTS---------C--------EEEEEECTTGGGTCSCBCCEEEECTTSCE
T ss_pred C-CCCCceEECCCCCEEEEEcCCCEEEEECCCC---------C--------EEEEEEcCCCccccccCcceEEECCCCCE
Confidence 2 3678899999999888777788999999843 2 2333333322 58888987 556
Q ss_pred EEEEcCC
Q psy12614 315 LYSGGLD 321 (708)
Q Consensus 315 l~s~~~d 321 (708)
|+.++.+
T Consensus 294 L~v~~~~ 300 (333)
T 2dg1_A 294 LIICSND 300 (333)
T ss_dssp EEEEEEC
T ss_pred EEEEeCc
Confidence 6655554
No 180
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.71 E-value=2.8e-13 Score=131.99 Aligned_cols=278 Identities=8% Similarity=-0.002 Sum_probs=191.6
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC
Q psy12614 23 APEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR 100 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~ 100 (708)
..+...+.+++++++|++.++...++.|.+||.. +......+..+. ..+.++++. +..+++...++.|..||..
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPD--AKVMCLTISSDGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTT--CCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCccc--CceeeEEECCCCCEEEeCCCCCeEEEECCC-
Confidence 4456789999999999977776667899999998 665432333344 789999998 6666666668899999987
Q ss_pred CeE-eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eE
Q psy12614 101 LNI-KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AV 178 (708)
Q Consensus 101 ~~~-~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i 178 (708)
++. ...+......+.+++++++|+++++...++.|..||. +++... .........+..+++.++|+..++...+ .|
T Consensus 87 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 87 GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-YELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-ecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 332 2222234567899999999988877767889999998 555542 2333345678999999999888877766 99
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE-EEcCCCcEEEEeCCCCeeEEE-eeccccCeEEEEEeCCC
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-TGDSGGFVRFWDGKTGVQWSD-VKTHKKDILALTVSEDE 256 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~-~~~~~~~i~~~~~s~~~ 256 (708)
..||. +++... +... .....+..+++.++|++. +...++.|.+||. +++.... ...+...+.+++++++|
T Consensus 165 ~~~~~-~g~~~~-~~~~-----~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g 236 (299)
T 2z2n_A 165 GRITE-SGDITE-FKIP-----TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGI 236 (299)
T ss_dssp EEECT-TCCEEE-EECS-----STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTT
T ss_pred EEEcC-CCcEEE-eeCC-----CCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCC
Confidence 99998 666543 2222 124568899999999754 4445789999998 6664332 33345678999999999
Q ss_pred CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCC
Q psy12614 257 NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~ 331 (708)
+..++...++.|..|+... . ........+...+.++++. +.+.++.. .+.+..++..+
T Consensus 237 ~l~v~~~~~~~i~~~d~~g---------~-------~~~~~~~~~~~~~~~i~~~~g~l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 237 DLWFTEWGANKIGRLTSNN---------I-------IEEYPIQIKSAEPHGICFDGETIWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp CEEEEETTTTEEEEEETTT---------E-------EEEEECSSSSCCEEEEEECSSCEEEEET-TTEEEEEEEC-
T ss_pred CEEEeccCCceEEEECCCC---------c-------eEEEeCCCCCCccceEEecCCCEEEEec-CCcEEEEEcCc
Confidence 8666655678999999843 1 0111122334567777666 44444444 55666665544
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=3.3e-14 Score=141.02 Aligned_cols=243 Identities=8% Similarity=-0.026 Sum_probs=169.2
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC----
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ---- 90 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d---- 90 (708)
.....+..+...+.+++|+|+|++++++..++.|.+||..+++... ....+. ..+.+++++ ++.+++...+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~-~~~~~~--~~~~~i~~~~dg~l~v~~~~~~~~~ 111 (333)
T 2dg1_A 35 EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR-PFVSHK--ANPAAIKIHKDGRLFVCYLGDFKST 111 (333)
T ss_dssp EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECSS--SSEEEEEECTTSCEEEEECTTSSSC
T ss_pred ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE-EeeCCC--CCcceEEECCCCcEEEEeCCCCCCC
Confidence 3444566677788999999999988888889999999999887654 444555 789999999 6666666655
Q ss_pred CcEEEEECCCCeEeEEEe--ecCCceEEEEEecCCCEEEEEeC------CCcEEEEEccCCcEEEEEecccccccEEEEE
Q psy12614 91 GFVNEYDMRRLNIKSSTA--VTSGTCWCLSVHKKKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQQGRILCTA 162 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 162 (708)
+.|.+||.++++....+. .+...+.+++++|+|+++++... .+.|..+|..+++.. .+......+..++
T Consensus 112 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~i~ 188 (333)
T 2dg1_A 112 GGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT---PIIQNISVANGIA 188 (333)
T ss_dssp CEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE---EEEEEESSEEEEE
T ss_pred ceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE---EeecCCCcccceE
Confidence 689999998877553433 34467999999999987776543 245666666655553 2222334578999
Q ss_pred ECCCCCEEEEe-cCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCCEEE-EEcCCCcEEEEeCCCCeeEE
Q psy12614 163 WHSSGDYLVTG-CAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-TGDSGGFVRFWDGKTGVQWS 238 (708)
Q Consensus 163 ~s~d~~~l~~~-~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~ 238 (708)
|+||++.|+.+ +.+ .|.+||+.+ +..+..+.......+.....+..+++.++|++. +...++.|.+||. +++.+.
T Consensus 189 ~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~ 267 (333)
T 2dg1_A 189 LSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIG 267 (333)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEE
T ss_pred ECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEE
Confidence 99999866554 445 999999964 443322210000000002467889999999754 4456789999998 577666
Q ss_pred Eeecccc------CeEEEEEeCCCCEEEEEecCC
Q psy12614 239 DVKTHKK------DILALTVSEDENYLYCAGVDP 266 (708)
Q Consensus 239 ~~~~~~~------~i~~~~~s~~~~~l~~~~~dg 266 (708)
.+..+.. .+.+++|+||++.|+.++.++
T Consensus 268 ~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 268 QILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred EEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 6654433 688999999988887766653
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.71 E-value=1.2e-14 Score=145.04 Aligned_cols=259 Identities=11% Similarity=0.083 Sum_probs=178.3
Q ss_pred CcEEEEEEcCCCCEEEEEe---------CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC---C-
Q psy12614 27 KVINCIACEPKSSRLAVSR---------ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ---G- 91 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~---------~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d---~- 91 (708)
..+...++ ||++||... .++.|.+||+.+++.. .+ ..+..++|+ |++|+.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~--~l------~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR--FI------ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE--EE------ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE--Ec------ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 34677788 999988752 2567999999988753 33 247789999 8888877653 2
Q ss_pred -cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC---------------------------CcEEEEEccCC
Q psy12614 92 -FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ---------------------------GHINLFQISDE 143 (708)
Q Consensus 92 -~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d---------------------------~~i~iwd~~~~ 143 (708)
.|.+||+.+++.......+ . +..++|+|||+.|+.++.+ ..|++||+.++
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 162 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE 162 (347)
T ss_dssp EEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred ceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence 4888899988876655544 3 9999999999999887642 57999999988
Q ss_pred cEEEEEecccccccEEEEEECCCCCEEEEecC---------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 144 GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA---------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 144 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~---------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
+.. ..+.. . .+..++|+||| .++++.. . .|.++| +++. ..+.. ...+..+ +|
T Consensus 163 ~~~--~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~--------~~~~~~~--sp 224 (347)
T 2gop_A 163 EVI--EEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKE-EKMFE--------KVSFYAV--DS 224 (347)
T ss_dssp EEE--EEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEE-EEEEE--------EESEEEE--EE
T ss_pred eEE--eeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCce-EEecc--------CcceeeE--CC
Confidence 763 12222 3 67899999999 7776643 3 455555 4443 33321 1223333 89
Q ss_pred CCE-EEEEcCC--------CcEEEEeCCCCeeEEEeeccccCeEE-EEEeCCCCEEEEEecCCeEEEEEccCCcccccCC
Q psy12614 214 DFT-IITGDSG--------GFVRFWDGKTGVQWSDVKTHKKDILA-LTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTS 283 (708)
Q Consensus 214 ~~~-l~~~~~d--------g~i~~wd~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 283 (708)
||+ ++.++.+ ..|.+|| +++.......+...+.. +.|+ |+ .+++++.++.+++| +.+
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~-------- 291 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD-------- 291 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES--------
T ss_pred CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC--------
Confidence 996 6655533 4688888 66655555566777886 8999 88 88899999999999 876
Q ss_pred CCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeE-EEEeCCCCceeecC
Q psy12614 284 GPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYL-SLSYYPPKTLVKYP 338 (708)
Q Consensus 284 g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i-~iw~~~~~~~~~~~ 338 (708)
++ . ..+..+...|.++++++..+++++.++.. .+|.++ +...++.
T Consensus 292 g~--------~-~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~l~~~~-g~~~~lt 337 (347)
T 2gop_A 292 GE--------I-KPIAKGRHWIMGFDVDEIVVYLKETATRLRELFTWD-GEEKQLT 337 (347)
T ss_dssp SS--------E-EEEECSSSEEEEEEESSSEEEEEECSSSCCEEEEES-SSEEECC
T ss_pred Cc--------e-EEEecCCCeEEeeeeeCcEEEEEcCCCChHHheEeC-CcEEEec
Confidence 54 2 33344567788888877555666666654 667665 4444433
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.70 E-value=1.9e-13 Score=143.12 Aligned_cols=318 Identities=11% Similarity=0.042 Sum_probs=218.4
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECC--CCeEeEEEeec
Q psy12614 35 EPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMR--RLNIKSSTAVT 110 (708)
Q Consensus 35 s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~--~~~~~~~~~~~ 110 (708)
+|.+.++++...++.|.++|..+++.+. .+... ..+..++|+ |+++++++.|+.|.+||+. +++.+..+..
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~-~i~~g---~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~- 238 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKT-VLDTG---YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI- 238 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEE-EEECS---SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEE-EEeCC---CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-
Confidence 3445566677788999999999998876 45432 457799999 8999999999999999996 7788877765
Q ss_pred CCceEEEEEe----cCCCEEEEEeC-CCcEEEEEccCCcEEEEEeccc--------cc-ccEEEEEECCCCCEEEEecC-
Q psy12614 111 SGTCWCLSVH----KKKRLLAAGTE-QGHINLFQISDEGLLYEKLLDR--------QQ-GRILCTAWHSSGDYLVTGCA- 175 (708)
Q Consensus 111 ~~~v~~~~~s----~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~--------~~-~~v~~~~~s~d~~~l~~~~~- 175 (708)
......++|+ |||++++++.. +++|.++|..+.+.+......+ |. ..+..+..++++..++....
T Consensus 239 G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 239 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 3456899999 69999887765 6999999999988774333222 22 26888999998776655544
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCeeEEEeec-----cccCe
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQWSDVKT-----HKKDI 247 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~~~~~~~-----~~~~i 247 (708)
. .|.++|..+.+.+....... ......+.|+|+|+ +++...++.|.++|+.+++.+..+.. |.+.-
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~------~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g 392 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISA------ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRG 392 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEEC------CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTC
T ss_pred CCeEEEEecCCCccceeeeeec------cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccc
Confidence 4 99999988765443333221 34567889999996 44555688999999999988776653 32212
Q ss_pred EEEEEeCCCCEEEEEe--cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcC---
Q psy12614 248 LALTVSEDENYLYCAG--VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGL--- 320 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~--- 320 (708)
..+ +.|++..+++.+ .++.|.+++..+ ++. ....|.....+......-..+..+ +.++.+...
T Consensus 393 ~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~--------~~~-~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~ 462 (567)
T 1qks_A 393 ANF-VHPTFGPVWATSHMGDDSVALIGTDP--------EGH-PDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNP 462 (567)
T ss_dssp EEE-EETTTEEEEEEEBSSSSEEEEEECCT--------TTC-TTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCS
T ss_pred eee-ECCCCCcEEEeCCCCCCeEEEecCCC--------CCC-ccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCC
Confidence 222 578755555433 468999999876 320 111244455555443332334455 677777653
Q ss_pred ----CCeEEEEeCCCC-----c--eeecC--------ccCCCCceEEEEcCCcEEEEE------cCCeEEEEEecCCC
Q psy12614 321 ----DSYLSLSYYPPK-----T--LVKYP--------CTLAQSTPVSLAKDIQHVLLQ------YTSHLELWSLGSAQ 373 (708)
Q Consensus 321 ----d~~i~iw~~~~~-----~--~~~~~--------~~~~~~~~~~~s~~~~~l~~~------~~~~i~i~~~~~~~ 373 (708)
...|.++|+.+. . ...+. ........+.++++|+.+.++ .++.|.++|..+.+
T Consensus 463 ~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 463 EAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp SHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 359999998866 1 11221 012234678899999988764 26889999988754
No 184
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.69 E-value=1.4e-14 Score=142.86 Aligned_cols=239 Identities=9% Similarity=0.024 Sum_probs=177.5
Q ss_pred CcEEEEEEe--CCEEEEEcCC------------------------CcEEEEECCCCeEeEEEe-ecCCceEEEEEecCCC
Q psy12614 72 NSIECLTWF--NDRLFSGGLQ------------------------GFVNEYDMRRLNIKSSTA-VTSGTCWCLSVHKKKR 124 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d------------------------~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~ 124 (708)
+.+.+|+++ |+.+++...+ ++|.+||..+++.+..+. .+-.....++++|+|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 678999999 7777776666 479999999998876665 3445789999999999
Q ss_pred EEEEEeCCCcEEEEEccCCc-EEEEEec---------ccccccEEEEEECC-CCCEEEEec-CC-eEEEEEcCCCceEEE
Q psy12614 125 LLAAGTEQGHINLFQISDEG-LLYEKLL---------DRQQGRILCTAWHS-SGDYLVTGC-AA-AVRVWDIHKGHAIHK 191 (708)
Q Consensus 125 ~la~~~~d~~i~iwd~~~~~-~~~~~~~---------~~~~~~v~~~~~s~-d~~~l~~~~-~d-~i~iwd~~~~~~~~~ 191 (708)
++++...++.|++||..... .+ ..+ ..+-.....++++| ++..+++.+ .+ .|++|+ .+++.+..
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~~--~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGPL--LILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCCS--EEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred EEEEECCCCEEEEEeCCCCeEEE--EEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 88888888999999987652 22 222 23445789999999 788888876 56 999999 57777776
Q ss_pred EEecccC----CCCCceeEEEEEEccC-CE-EEEEcCCCcEEEEeCCCCeeEEEee--ccccCeEEEEEeCCCCEEEE--
Q psy12614 192 MSLDKSS----KFSKNTAVWCVAFCAD-FT-IITGDSGGFVRFWDGKTGVQWSDVK--THKKDILALTVSEDENYLYC-- 261 (708)
Q Consensus 192 ~~~~~~~----~~~~~~~v~~~~~~~~-~~-l~~~~~dg~i~~wd~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~-- 261 (708)
+...... . ........++++|+ ++ +++...++.|++||..+|+.+..+. .+...+..++++| +..+.+
T Consensus 181 ~~~~g~~~~~~~-~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g 258 (329)
T 3fvz_A 181 WGEESSGSSPRP-GQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNG 258 (329)
T ss_dssp ECEECCSSSCCT-TEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEEC
T ss_pred eccCCCCCCCCC-cccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCC
Confidence 6432110 0 11244889999998 77 5666778899999998898888874 4566788999999 433332
Q ss_pred -----EecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE---eccccceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 262 -----AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR---VIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 262 -----~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
...+..|++|+..+ |+ ....+ ..+...+.+++++ |.++++...++.|++|++..
T Consensus 259 ~~~v~~~~~~~v~~~~~~~--------g~--------~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 259 KPYFGDQEPVQGFVMNFSS--------GE--------IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCCTTCSCCCCEEEEETTT--------CC--------EEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CEEeccCCCcEEEEEEcCC--------Ce--------EEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 23345899999988 65 34444 3566778999998 66788888899999998754
No 185
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=1.4e-10 Score=128.80 Aligned_cols=539 Identities=9% Similarity=0.058 Sum_probs=322.3
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEe---cCCC-CCcEEEEEEe---CCEEEEEcCCCcEEEEECC
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFI---GDPL-SNSIECLTWF---NDRLFSGGLQGFVNEYDMR 99 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~---~h~~-~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~ 99 (708)
..|.++...++|+.|-+|+.++.+..||..+++....... ...+ ...|.++... ...|..++.++.|..+|.+
T Consensus 66 n~I~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~ 145 (781)
T 3v9f_A 66 NELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIA 145 (781)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSSCEEEEETT
T ss_pred cccceEEEcCCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEECCCCeeEEECC
Confidence 4599999999887355577775799999988776431111 1100 1368888765 3677777766678999988
Q ss_pred CCeEeEEEe-----ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecc-----cccccEEEEEECCCCCE
Q psy12614 100 RLNIKSSTA-----VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLD-----RQQGRILCTAWHSSGDY 169 (708)
Q Consensus 100 ~~~~~~~~~-----~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~s~d~~~ 169 (708)
+++...... .....|.++...++|.+.+ ++.++-|..||..+++........ -....|.++...+++.+
T Consensus 146 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l 224 (781)
T 3v9f_A 146 TGKFTHYNKSTVPALPSEQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNI 224 (781)
T ss_dssp TTEEEEESTTTCTTCSCCCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCE
T ss_pred CCeEEeeccCcccCCCccceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCE
Confidence 766543211 1234688888888876554 566656889998887654211000 11356899999888886
Q ss_pred EEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEee--------
Q psy12614 170 LVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK-------- 241 (708)
Q Consensus 170 l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~-------- 241 (708)
.+... +.+.+||..+++.............-....|.++...++|.+..|+..+-|.++|..+++......
T Consensus 225 wigt~-~Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~ 303 (781)
T 3v9f_A 225 WIGTS-KGLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIRE 303 (781)
T ss_dssp EEEET-TEEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECB
T ss_pred EEEeC-CcHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccC
Confidence 66543 389999987665432211100000011466999999999998888886779999987665322111
Q ss_pred ------ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE-------EeccccceEEE
Q psy12614 242 ------THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN-------RVIHEGDVKSL 308 (708)
Q Consensus 242 ------~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~v~~l 308 (708)
.....|.++...++|+ |..|+.++-|..++... +. +..... .......|.++
T Consensus 304 ~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~--------~~------~~~~~~~~~~~~~~~l~~~~v~~i 368 (781)
T 3v9f_A 304 GDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAP--------PT------FHTWSYSPTQMNESSLSNKVVSSV 368 (781)
T ss_dssp CSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSC--------CS------CEEEC----CCCSSCCSSSCEEEE
T ss_pred CCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCC--------Cc------ceeeccCccccccCCCCCcceEEE
Confidence 1345789999998885 55677777888888775 21 101100 01123568888
Q ss_pred EEe-CCEEEEEcCCCeEEEEeCCCCceeecCcc----CCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCC
Q psy12614 309 ALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCT----LAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNT 383 (708)
Q Consensus 309 ~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~----~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~ 383 (708)
... ...|..|+.++-|..++..+.....+..+ ...+.++...++|.+.+...++.+..++..++.
T Consensus 369 ~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~---------- 438 (781)
T 3v9f_A 369 CDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKK---------- 438 (781)
T ss_dssp EECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCE----------
T ss_pred EEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCc----------
Confidence 887 56677788777788898876654443211 122345556677888777777788888776533
Q ss_pred CcccCCCCceEEEEEE--ecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccc-cceeEEEEE
Q psy12614 384 TGVPLLSFPRLIVKMS--AVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLF-KSIFTHVLI 460 (708)
Q Consensus 384 ~~~~~~~~~~~~~~~~--~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~ 460 (708)
+.... ......|.++...++|.+.+... +.+..|+..+ ...... ........ ...|.++..
T Consensus 439 -----------~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~--~~~~~~--~~~~~~~~~~~~i~~i~~ 502 (781)
T 3v9f_A 439 -----------FQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLAS--KKVIHH--YDTSNSQLLENFVRSIAQ 502 (781)
T ss_dssp -----------EEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSS--SSCCEE--ECTTTSSCSCSCEEEEEE
T ss_pred -----------EEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCC--CeEEec--ccCcccccccceeEEEEE
Confidence 21111 11346788999888887666554 5677777654 222211 11111000 236777888
Q ss_pred ecCCCeEEEEecCCcEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceee-ecC---
Q psy12614 461 SADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA-SLP--- 536 (708)
Q Consensus 461 s~d~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~~--- 536 (708)
.++|.+.+ ++.++.|+.++.... ....+....+. ....|.++...++|++.++. .+|.|..||..+... .+.
T Consensus 503 d~~g~lWi-gt~~~Gl~~~~~~~~-~~~~~~~~~~l-~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~~~~~~~~ 578 (781)
T 3v9f_A 503 DSEGRFWI-GTFGGGVGIYTPDMQ-LVRKFNQYEGF-CSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDYQVFQRKE 578 (781)
T ss_dssp CTTCCEEE-EESSSCEEEECTTCC-EEEEECTTTTC-SCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCCEEECGGG
T ss_pred cCCCCEEE-EEcCCCEEEEeCCCC-eEEEccCCCCC-CCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcEEEccccC
Confidence 88888766 444333555654332 23334322221 14578999999999866655 366658888773322 221
Q ss_pred C-CCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCee
Q psy12614 537 R-YRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSA 615 (708)
Q Consensus 537 ~-~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~ 615 (708)
+ ....|.++...++|++.+ ++.+| |..|+..+++...+... .-+........++...++|. |..++.+|
T Consensus 579 gl~~~~i~~i~~d~~g~lW~-~t~~G-l~~~~~~~~~~~~~~~~------dGl~~~~f~~~~~~~~~~G~-l~~g~~~G- 648 (781)
T 3v9f_A 579 GLPNTHIRAISEDKNGNIWA-STNTG-ISCYITSKKCFYTYDHS------NNIPQGSFISGCVTKDHNGL-IYFGSING- 648 (781)
T ss_dssp TCSCCCCCEEEECSSSCEEE-ECSSC-EEEEETTTTEEEEECGG------GTCCSSCEEEEEEEECTTSC-EEEEETTE-
T ss_pred CCCCceEEEEEECCCCCEEE-EcCCc-eEEEECCCCceEEeccc------CCccccccccCceEECCCCE-EEEECCCc-
Confidence 1 124688999998888655 44555 88888877654422110 01111111234677777887 56677787
Q ss_pred EEEEecC
Q psy12614 616 LCVINKN 622 (708)
Q Consensus 616 i~~wd~~ 622 (708)
+..++..
T Consensus 649 l~~f~p~ 655 (781)
T 3v9f_A 649 LCFFNPD 655 (781)
T ss_dssp EEEECSC
T ss_pred eEEEChh
Confidence 5556654
No 186
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.68 E-value=1.8e-13 Score=132.22 Aligned_cols=231 Identities=11% Similarity=0.117 Sum_probs=165.9
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEee------cCCceEEEEEe-cCCCEEEEEeC-CCcEEEEEcc
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAV------TSGTCWCLSVH-KKKRLLAAGTE-QGHINLFQIS 141 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~------~~~~v~~~~~s-~~~~~la~~~~-d~~i~iwd~~ 141 (708)
..+.+++++ +..+++...++.|.+||.+ ++.+..+.. +...+..++++ ++++++++... ++.|.+|| .
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~ 107 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-Q 107 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-T
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-C
Confidence 678999998 7777777889999999987 566655542 33578899995 67766665533 78999999 4
Q ss_pred CCcEEEEEecc-cccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EE
Q psy12614 142 DEGLLYEKLLD-RQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-II 218 (708)
Q Consensus 142 ~~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~ 218 (708)
+++.. ..+. .+...+..++++|+|+.+++...+ .|.+||. +++.+..+... .....+..++++++|+ ++
T Consensus 108 ~g~~~--~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~-----~~~~~p~~i~~~~~g~l~v 179 (286)
T 1q7f_A 108 YGQFV--RKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCS-----KHLEFPNGVVVNDKQEIFI 179 (286)
T ss_dssp TSCEE--EEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECT-----TTCSSEEEEEECSSSEEEE
T ss_pred CCcEE--EEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCC-----CccCCcEEEEECCCCCEEE
Confidence 55554 3332 334578999999999988877777 9999995 46666655432 1145689999999998 45
Q ss_pred EEcCCCcEEEEeCCCCeeEEEeecc--ccCeEEEEEeCCCCEEEEEecCC-eEEEEEccCCcccccCCCCCCCCcceEEe
Q psy12614 219 TGDSGGFVRFWDGKTGVQWSDVKTH--KKDILALTVSEDENYLYCAGVDP-TVVCFQRTRKPQVCSTSGPEQGSSVWVRS 295 (708)
Q Consensus 219 ~~~~dg~i~~wd~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~g~~~~~~~~~~~ 295 (708)
+...++.|++||. +++.+..+..+ ...+..++++++|+++++...++ .|.+|+... + ..
T Consensus 180 ~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g---------~--------~~ 241 (286)
T 1q7f_A 180 SDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG---------Q--------LI 241 (286)
T ss_dssp EEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS---------C--------EE
T ss_pred EECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC---------C--------EE
Confidence 5566899999997 46666666433 36789999999998888887775 999999643 2 23
Q ss_pred EEEeccc--cceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 296 VNRVIHE--GDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 296 ~~~~~~~--~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
..+..+. ..+.+++++ +.++++ +.++.|++|++..
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 242 SALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred EEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 3333332 236778887 544444 6688899988754
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.68 E-value=6.4e-15 Score=161.87 Aligned_cols=241 Identities=7% Similarity=0.021 Sum_probs=174.3
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc----
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQ-----SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF---- 92 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg-----~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~---- 92 (708)
+|...+..++|||||++||.+..++ .|++||+.+++.+...+.. ..+..++|+ |+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~----~~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER----VKFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE----ECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC----cccceEEEEeCCCEEEEEEECCccccc
Confidence 4555789999999999999875543 8999999999876533332 225679999 888988887765
Q ss_pred ------------EEEEECCCCeEe--EEEe--ecCCceEEEEEecCCCEEEEEeC-----CCcEEEEEccC------CcE
Q psy12614 93 ------------VNEYDMRRLNIK--SSTA--VTSGTCWCLSVHKKKRLLAAGTE-----QGHINLFQISD------EGL 145 (708)
Q Consensus 93 ------------i~vwd~~~~~~~--~~~~--~~~~~v~~~~~s~~~~~la~~~~-----d~~i~iwd~~~------~~~ 145 (708)
|.+|++.+++.. ..+. .|...+..++|||||++|+.++. +..|++||+.+ +..
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc
Confidence 999999887632 2223 24556889999999999988765 57899999986 521
Q ss_pred EEEEecccccccEEEEEECCCCCEEEEecC----C-eEEEEEcCCCc--eEEEEEecccCCCCCceeEEEEEEccCCE-E
Q psy12614 146 LYEKLLDRQQGRILCTAWHSSGDYLVTGCA----A-AVRVWDIHKGH--AIHKMSLDKSSKFSKNTAVWCVAFCADFT-I 217 (708)
Q Consensus 146 ~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~----d-~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l 217 (708)
.. ..+..+...+.. .|+|+|+.|+..+. + .|.+||+.++. ....+.... ....+..++|++++. +
T Consensus 278 ~~-~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~lv 350 (710)
T 2xdw_A 278 KW-VKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH-----EKDVLEWVACVRSNFLV 350 (710)
T ss_dssp CC-EEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC-----SSCEEEEEEEETTTEEE
T ss_pred ce-EEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC-----CCCeEEEEEEEcCCEEE
Confidence 11 344445555544 48899998876654 2 59999998774 234443321 124688899987776 5
Q ss_pred EEEcCCC--cEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEe----cCCeEEEEEccC
Q psy12614 218 ITGDSGG--FVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG----VDPTVVCFQRTR 275 (708)
Q Consensus 218 ~~~~~dg--~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----~dg~i~iw~~~~ 275 (708)
++...++ .|.+|++.+|+.+..+..+...+..++++|+++.++... ..+.++.||+.+
T Consensus 351 ~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 351 LCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred EEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 6666676 467788877887778877778888999999998776442 246899999987
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.67 E-value=4.5e-14 Score=138.99 Aligned_cols=266 Identities=8% Similarity=0.014 Sum_probs=185.9
Q ss_pred CCCcEEEEeCCCCCeEEEEEe---cCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEec
Q psy12614 46 ADQSIEIWDISETPHVDRVFI---GDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHK 121 (708)
Q Consensus 46 ~dg~v~iwd~~~~~~~~~~~~---~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~ 121 (708)
.++.|.++|..+++.....+. +..+......+++. +..+++...++.|.+||..+++.+.++. .......+++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~ 93 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLS 93 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeC
Confidence 478999999999876542211 22223557888888 5555666678999999999999988885 356789999999
Q ss_pred CCCEEEEEeCCCcEEEEEccCCcEEEEEeccc---ccccEEEEEECCCCCEEEEec--CC-eEEEEEcCCCceEEEEEec
Q psy12614 122 KKRLLAAGTEQGHINLFQISDEGLLYEKLLDR---QQGRILCTAWHSSGDYLVTGC--AA-AVRVWDIHKGHAIHKMSLD 195 (708)
Q Consensus 122 ~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~s~d~~~l~~~~--~d-~i~iwd~~~~~~~~~~~~~ 195 (708)
+++.+++...++.|.+||..+++......... .......+++ ++..|+.+. .+ .|.++|+.+++.+..+...
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 98544443378999999999988763222222 0114456667 344555444 36 9999999999988888654
Q ss_pred ccCCCCCceeEEEEEEccCCEEEEEcC-C----------CcEEEEeCCCCeeEEEeecc-ccCeEEEEEeCCCCEEEEEe
Q psy12614 196 KSSKFSKNTAVWCVAFCADFTIITGDS-G----------GFVRFWDGKTGVQWSDVKTH-KKDILALTVSEDENYLYCAG 263 (708)
Q Consensus 196 ~~~~~~~~~~v~~~~~~~~~~l~~~~~-d----------g~i~~wd~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~ 263 (708)
.....++++|+|+++.++. + +.|.++|..+++....+... ......++++|++++|+++.
T Consensus 172 --------~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 172 --------IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp --------SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred --------CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 2346788999998555544 3 68999999999887776532 24688999999999999876
Q ss_pred cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEE----cCCCeEEEEeCCCCceee
Q psy12614 264 VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSG----GLDSYLSLSYYPPKTLVK 336 (708)
Q Consensus 264 ~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~----~~d~~i~iw~~~~~~~~~ 336 (708)
. .|.+||..+ ++.. .. ............++++ +..+++. ..++.|.+||.....+..
T Consensus 244 ~--~v~~~d~~t--------~~~~-~~-----~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~ 307 (328)
T 3dsm_A 244 N--DIWRMPVEA--------DRVP-VR-----PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDE 307 (328)
T ss_dssp S--SEEEEETTC--------SSCC-SS-----CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEE
T ss_pred c--EEEEEECCC--------Ccee-ee-----eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEE
Confidence 5 899999987 4300 00 0011113567888886 5566666 578899999998544444
Q ss_pred cC
Q psy12614 337 YP 338 (708)
Q Consensus 337 ~~ 338 (708)
+.
T Consensus 308 i~ 309 (328)
T 3dsm_A 308 FY 309 (328)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 189
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.66 E-value=3.3e-14 Score=141.99 Aligned_cols=253 Identities=8% Similarity=0.016 Sum_probs=165.4
Q ss_pred cEEEEEEeCCEEEEEc---------CCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC---C--cEEEE
Q psy12614 73 SIECLTWFNDRLFSGG---------LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ---G--HINLF 138 (708)
Q Consensus 73 ~v~~l~~~~~~l~s~~---------~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d---~--~i~iw 138 (708)
.+..+++.|++++... .++.|.+||+.+++... + ..+..++|||||++||.++.+ + .|++|
T Consensus 16 ~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~ 90 (347)
T 2gop_A 16 YLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIWVA 90 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEE
T ss_pred EcccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEEEE
Confidence 4455555666665432 26789999999887543 3 468889999999999987754 2 48888
Q ss_pred EccCCcEEEEEecccccccEEEEEECCCCCEEEEecC---------------------------C-eEEEEEcCCCceEE
Q psy12614 139 QISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA---------------------------A-AVRVWDIHKGHAIH 190 (708)
Q Consensus 139 d~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~---------------------------d-~i~iwd~~~~~~~~ 190 (708)
|+.+++.. .+..+.. +..++|+|||+.|+.++. . .|.+||+.+++.+.
T Consensus 91 ~~~~g~~~---~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 166 (347)
T 2gop_A 91 DLETLSSK---KILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE 166 (347)
T ss_dssp ETTTTEEE---EEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEE
T ss_pred ECCCCceE---EEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe
Confidence 88888764 2222334 999999999999988752 3 79999998887645
Q ss_pred EEEecccCCCCCceeEEEEEEccCCEEEEEcCC---------CcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEE
Q psy12614 191 KMSLDKSSKFSKNTAVWCVAFCADFTIITGDSG---------GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC 261 (708)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d---------g~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 261 (708)
.+.. . .+..++|+|||.++++..+ ..|.++| +++. ..+..+ ..+..+ +|||++|+.
T Consensus 167 ~l~~--------~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~-~~~~~~--spdg~~l~~ 231 (347)
T 2gop_A 167 EFEK--------P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKE-EKMFEK-VSFYAV--DSDGERILL 231 (347)
T ss_dssp EEEE--------E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEE-EEEEEE-ESEEEE--EECSSCEEE
T ss_pred eecC--------C-CcccccCCCCeEEEEEecccccccccccccEEEeC--CCce-EEeccC-cceeeE--CCCCCEEEE
Confidence 4432 2 4567899999933334332 2455555 5554 334334 555544 999998887
Q ss_pred EecC--------CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEE-EEEeCCEEEEEcCCCeEEEEeCCCC
Q psy12614 262 AGVD--------PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS-LALHGNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 262 ~~~d--------g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~-l~~~~~~l~s~~~d~~i~iw~~~~~ 332 (708)
++.+ ..|.+|| + ++ .......+...+.. +.|++.++++++.++.+++| +.++
T Consensus 232 ~~~~~~~~~~~~~~l~~~d--~--------~~--------~~~l~~~~~~~~~~~~~~sdg~~~~~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 232 YGKPEKKYMSEHNKLYIYD--G--------KE--------VMGILDEVDRGVGQAKIKDGKVYFTLFEEGSVNLY-IWDG 292 (347)
T ss_dssp EECCSSSCCCSSCEEEEEC--S--------SC--------EEESSTTCCSEEEEEEEETTEEEEEEEETTEEEEE-EESS
T ss_pred EEccccCCccccceEEEEC--C--------Cc--------eEeccccCCcccCCccEEcCcEEEEEecCCcEEEE-EcCC
Confidence 7754 3688888 5 43 22233345566775 77872288888999999999 8754
Q ss_pred ceeecCccCCCCceEEEEcCCcEEEE-EcCCeE-EEEEec
Q psy12614 333 TLVKYPCTLAQSTPVSLAKDIQHVLL-QYTSHL-ELWSLG 370 (708)
Q Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~~l~~-~~~~~i-~i~~~~ 370 (708)
....+.........++++| .++++ ..++.. .+|.+.
T Consensus 293 ~~~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 293 EIKPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp SEEEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred ceEEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 4444432333345677888 45544 444433 666655
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.66 E-value=1.4e-13 Score=133.78 Aligned_cols=247 Identities=10% Similarity=-0.022 Sum_probs=174.3
Q ss_pred CeEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eE
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AV 178 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i 178 (708)
+..+..+..+.....+++|+|+++ +++++..++.|..||..++ . ..+..+...+.+++++|+|+++++...+ .|
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~---~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i 92 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L---SPEMHPSHHQNGHCLNKQGHLIACSHGLRRL 92 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E---EEEESSCSSEEEEEECTTCCEEEEETTTTEE
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e---EEEECCCCCcceeeECCCCcEEEEecCCCeE
Confidence 344455556667788999999998 7777888999999999987 4 3455566789999999999988887776 99
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEE-----c-------------CCCcEEEEeCCCCeeEEEe
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITG-----D-------------SGGFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~-----~-------------~dg~i~~wd~~~~~~~~~~ 240 (708)
.+||..+++.......... .....+..++++|+|++..+ . ..+.|..++.. ++. ..+
T Consensus 93 ~~~d~~~g~~~~~~~~~~~---~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~ 167 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEG---KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAP 167 (296)
T ss_dssp EEECSTTCCEEEEECEETT---EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEE
T ss_pred EEEcCCCCcEEEEeeccCC---CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEe
Confidence 9999988876544322110 00234568999999985553 2 13467777765 443 344
Q ss_pred eccccCeEEEEEeCCCCEEEEEecCCeEEEEEcc-CCcccccCCCCCCCCcce-EEeEEEeccccceEEEEEe--CCEEE
Q psy12614 241 KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRT-RKPQVCSTSGPEQGSSVW-VRSVNRVIHEGDVKSLALH--GNRLY 316 (708)
Q Consensus 241 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~v~~l~~~--~~~l~ 316 (708)
..+......++|+|+++.+++.+.++.|.+|++. + |. . .....+..+...+.+++++ |++++
T Consensus 168 ~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~--------g~------~~~~~~~~~~~~~~p~~i~~d~~G~l~v 233 (296)
T 3e5z_A 168 IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNAR--------GE------TEYQGVHFTVEPGKTDGLRVDAGGLIWA 233 (296)
T ss_dssp ECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSS--------SC------EEEEEEEECCSSSCCCSEEEBTTSCEEE
T ss_pred ecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCC--------Cc------CcCCCeEeeCCCCCCCeEEECCCCCEEE
Confidence 4566677899999999999777778999999987 3 32 1 0112223345567788888 66555
Q ss_pred EEcCCCeEEEEeCCCCceeecCccCCCCceEEE-EcCCcEEEEEcCCeEEEEEecCCC
Q psy12614 317 SGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSL-AKDIQHVLLQYTSHLELWSLGSAQ 373 (708)
Q Consensus 317 s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~-s~~~~~l~~~~~~~i~i~~~~~~~ 373 (708)
+. ++.|.+|+.....+..+..+.. +..+++ +|+++.|.++..+.+.-++..+..
T Consensus 234 ~~--~~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~ 288 (296)
T 3e5z_A 234 SA--GDGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRG 288 (296)
T ss_dssp EE--TTEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCB
T ss_pred Ec--CCeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEccccc
Confidence 44 8899999998766666654445 778889 589888888766766666665533
No 191
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.64 E-value=4.6e-12 Score=123.33 Aligned_cols=277 Identities=8% Similarity=0.039 Sum_probs=193.4
Q ss_pred EecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEE-EeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 65 FIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSS-TAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 65 ~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
+..+. ..+.++++. |..+++...++.|.+||.. ++.... +..+...+.+++++++|.++++...++.|..||..
T Consensus 10 ~~~~~--~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 10 LTNQD--TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp CCSSS--CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCcC--CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 33444 689999999 6666665568999999988 554322 22345779999999999987776668889999986
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE-E
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-T 219 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~ 219 (708)
++... ..+......+..+++.+++..+++...+ .|..||. +++... +... .....+..+++.++|++. +
T Consensus 87 -g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~~~~-----~~~~~~~~i~~~~~g~l~v~ 157 (299)
T 2z2n_A 87 -GIIKE-YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-YELP-----NKGSYPSFITLGSDNALWFT 157 (299)
T ss_dssp -SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECS-----STTCCEEEEEECTTSCEEEE
T ss_pred -CcEEE-EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-ecCC-----CCCCCCceEEEcCCCCEEEE
Confidence 44321 2233345678999999999888877767 9999998 565443 2222 124568899999999754 4
Q ss_pred EcCCCcEEEEeCCCCeeEEE-eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE
Q psy12614 220 GDSGGFVRFWDGKTGVQWSD-VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR 298 (708)
Q Consensus 220 ~~~dg~i~~wd~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~ 298 (708)
...++.|..||. +++.... +......+..++++++++..++...++.|..|+. + ++ . .....
T Consensus 158 ~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~--------g~------~-~~~~~ 220 (299)
T 2z2n_A 158 ENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-S--------GE------I-TEFKI 220 (299)
T ss_dssp ETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T--------CC------E-EEEEC
T ss_pred eCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-C--------Cc------E-EEEEC
Confidence 455789999998 6665443 3334567889999999987776666789999998 6 43 1 11122
Q ss_pred eccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecC--ccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCC
Q psy12614 299 VIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYP--CTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSA 372 (708)
Q Consensus 299 ~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~ 372 (708)
..+...+.+++++ +..+++...++.|..|+.. ..+..+. .....+..+++ +++.+.++...+.+..++..+.
T Consensus 221 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 221 PTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKD 296 (299)
T ss_dssp SSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC--
T ss_pred CCCCCCceeEEECCCCCEEEeccCCceEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcc
Confidence 3345678899998 6666666578899999984 4444332 22345567888 9999888877788888887653
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.64 E-value=4e-15 Score=162.93 Aligned_cols=238 Identities=10% Similarity=0.025 Sum_probs=165.7
Q ss_pred CCCCcEEEEEEcCCCCEEEEE-----eCCCcEEEEeCCCCCeE-EEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc---
Q psy12614 24 PEPKVINCIACEPKSSRLAVS-----RADQSIEIWDISETPHV-DRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF--- 92 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~-----~~dg~v~iwd~~~~~~~-~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~--- 92 (708)
+|...+..++|||||++||.+ +++..|++||+.+++.+ ...+.+. ....++|+ |+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~----~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGG----KYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCC----TTCCCEECTTSSEEEEEECCCCTTS
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcc----cccceEEecCCCEEEEEEecCCCCC
Confidence 566679999999999999954 34468999999998864 2112211 12688999 888998888776
Q ss_pred ----------EEEEECCCCe----EeEEEeecCCceEEEEEecCCCEEEEEeCCC----cEEEEEccCCcEEEEEecccc
Q psy12614 93 ----------VNEYDMRRLN----IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG----HINLFQISDEGLLYEKLLDRQ 154 (708)
Q Consensus 93 ----------i~vwd~~~~~----~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~----~i~iwd~~~~~~~~~~~~~~~ 154 (708)
|++|++.++. ++.....+...+.+++|||||++|+.++.++ .|++|+..+++.. .+..+
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~---~l~~~ 270 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR---LLVKG 270 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE---EEEEC
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE---EeecC
Confidence 9999999876 3333334556789999999999998877665 6777776666553 34444
Q ss_pred cccEEEEEECCCCCEEEEec---CC-eEEEEEcCCCce--EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEE
Q psy12614 155 QGRILCTAWHSSGDYLVTGC---AA-AVRVWDIHKGHA--IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVR 227 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~~~---~d-~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~ 227 (708)
...+....+ ++|.+++... .+ .|.+||+.++.. ...+... .....+..++++ ++. +++...++..+
T Consensus 271 ~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-----~~~~~l~~~~~~-~~~lv~~~~~dg~~~ 343 (695)
T 2bkl_A 271 VGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPE-----DSSASLLSVSIV-GGHLSLEYLKDATSE 343 (695)
T ss_dssp SSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECC-----CSSCEEEEEEEE-TTEEEEEEEETTEEE
T ss_pred CCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecC-----CCCCeEEEEEEE-CCEEEEEEEECCEEE
Confidence 555566666 5666444443 25 899999987753 2333322 114567888888 555 67777888777
Q ss_pred EEeCC-CCeeEEEeecc-ccCeEEEEEeCCCCEEEEEe----cCCeEEEEEccC
Q psy12614 228 FWDGK-TGVQWSDVKTH-KKDILALTVSEDENYLYCAG----VDPTVVCFQRTR 275 (708)
Q Consensus 228 ~wd~~-~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~----~dg~i~iw~~~~ 275 (708)
+|.+. +++....+..+ ...+..++++|+++.++... ..+.|++||+.+
T Consensus 344 l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 344 VRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp EEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 77544 46556666554 56778888999998777433 347899999988
No 193
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=1.4e-09 Score=120.66 Aligned_cols=545 Identities=8% Similarity=0.046 Sum_probs=321.3
Q ss_pred eeeeeeeccCC-CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEec--CC-----C-CCcEEEEEEe-CCE-
Q psy12614 15 GVHNIKFYAPE-PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIG--DP-----L-SNSIECLTWF-NDR- 83 (708)
Q Consensus 15 ~~~~~~~~~~h-~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~--h~-----~-~~~v~~l~~~-~~~- 83 (708)
.++....-.+- ...|+++.-.++|. |=.|+.+| +..||-.+ . . .+.. .. + ...|.+|.-. ...
T Consensus 6 ~f~~~~~~~gLs~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~--f-~-~~~~~~~~~~~~~l~~n~I~~i~~d~~g~~ 79 (781)
T 3v9f_A 6 LIQRLGIEQGLSNNYVLSITQDKQGF-LWFATEEG-LNKFDGTR--F-I-TYYKEEQSSSVQSITGNELNEVYTDPVQPV 79 (781)
T ss_dssp CEEEESGGGTCSCSBEEEEEECTTSC-EEEEESSC-EEEECSSS--E-E-EECCCSSCSSSCCCSCSCEEEEEECSSSSE
T ss_pred ceEECCCCCCCccCEeEEEEECCCCC-EEEccCCc-CccccCCc--e-E-EEEcCCCCCccccccccccceEEEcCCCCE
Confidence 33443333333 46799999999985 56666675 77777553 1 1 2221 10 0 2458999887 455
Q ss_pred EEEEcCCCcEEEEECCCCeEeEEEee-------cCCceEEEEEec--CCCEEEEEeCCCcEEEEEccCCcEEEEEecc--
Q psy12614 84 LFSGGLQGFVNEYDMRRLNIKSSTAV-------TSGTCWCLSVHK--KKRLLAAGTEQGHINLFQISDEGLLYEKLLD-- 152 (708)
Q Consensus 84 l~s~~~d~~i~vwd~~~~~~~~~~~~-------~~~~v~~~~~s~--~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~-- 152 (708)
|..++.++-+..||..+++....... ....|.++.... ++. |..++.++.|..||..+++........
T Consensus 80 lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~-lwi~t~~~gl~~~~~~~~~~~~~~~~~~~ 158 (781)
T 3v9f_A 80 IWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKG-LWVCTYYRGIEYLDIATGKFTHYNKSTVP 158 (781)
T ss_dssp EEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSE-EEEEESSSCEEEEETTTTEEEEESTTTCT
T ss_pred EEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCC-EEEEECCCCeeEEECCCCeEEeeccCccc
Confidence 77888886799999988765432111 123688888887 665 445664556899998887764211100
Q ss_pred -cccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEe
Q psy12614 153 -RQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWD 230 (708)
Q Consensus 153 -~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd 230 (708)
-....|.++...+++.+.+ ++.+ .|..||..+++.............-....|.++...++|.+..++.+ -+.+||
T Consensus 159 ~l~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~~-Gl~~~d 236 (781)
T 3v9f_A 159 ALPSEQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTSK-GLALFN 236 (781)
T ss_dssp TCSCCCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEEEETT-EEEEEE
T ss_pred CCCccceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEEEeCC-cHheEC
Confidence 1134588888877776555 5555 89999987765432111000000001356889999889987777766 699999
Q ss_pred CCCCeeEEEee-------ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE------
Q psy12614 231 GKTGVQWSDVK-------THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN------ 297 (708)
Q Consensus 231 ~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~------ 297 (708)
..+++...... .....|.++...++|. |..|+..+-|.+++..+ +. +.....
T Consensus 237 ~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~--------~~------~~~~~~~~f~~~ 301 (781)
T 3v9f_A 237 ANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQ--------NQ------FLLPEQIRFEFI 301 (781)
T ss_dssp TTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTC--------C---------------CEEE
T ss_pred CCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCC--------Ce------eeeeeccccccc
Confidence 87765432211 1245689999888885 55566656788888876 32 000000
Q ss_pred ------EeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCc----------cCCCCceEEEEcCCcEEEEEc
Q psy12614 298 ------RVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPC----------TLAQSTPVSLAKDIQHVLLQY 360 (708)
Q Consensus 298 ------~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~----------~~~~~~~~~~s~~~~~l~~~~ 360 (708)
.......|.++... ...|..|+.++-|..++........+.. ....+.++...++|.+.+...
T Consensus 302 ~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~ 381 (781)
T 3v9f_A 302 REGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTD 381 (781)
T ss_dssp CBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEB
T ss_pred cCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeC
Confidence 01234568888888 5667778878888889887766444321 112234566677788887777
Q ss_pred CCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCccee
Q psy12614 361 TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQI 440 (708)
Q Consensus 361 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~ 440 (708)
++.|..|+..+... .............|.++...++|.+.+...++.+..++..+ + .+
T Consensus 382 ~~Gl~~~~~~~~~~------------------~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~--~--~~ 439 (781)
T 3v9f_A 382 GGGINVFENGKRVA------------------IYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRL--K--KF 439 (781)
T ss_dssp SSCEEEEETTEEEE------------------ECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSS--C--EE
T ss_pred CCcEEEEECCCCeE------------------EEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCC--C--cE
Confidence 77888888765320 00000001234678999988888877755566777776543 2 23
Q ss_pred EEeecCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEec
Q psy12614 441 SRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADR 519 (708)
Q Consensus 441 ~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 519 (708)
..+. .. ......|.++...++|.+.+ ++..|. .++..++.............. ...|.++...++|++.+.. .
T Consensus 440 ~~~~-~~-~~~~~~v~~i~~d~~g~lwi-gt~~Gl~~~~~~~~~~~~~~~~~~~~~~--~~~i~~i~~d~~g~lWigt-~ 513 (781)
T 3v9f_A 440 QIIE-LE-KNELLDVRVFYEDKNKKIWI-GTHAGVFVIDLASKKVIHHYDTSNSQLL--ENFVRSIAQDSEGRFWIGT-F 513 (781)
T ss_dssp EECC-ST-TTCCCCEEEEEECTTSEEEE-EETTEEEEEESSSSSCCEEECTTTSSCS--CSCEEEEEECTTCCEEEEE-S
T ss_pred EEec-cC-CCCCCeEEEEEECCCCCEEE-EECCceEEEeCCCCeEEecccCcccccc--cceeEEEEEcCCCCEEEEE-c
Confidence 3321 11 11133677788888887655 445443 444444433222211111111 3578999999999866654 4
Q ss_pred CCeEEEEECCceee-ecCC----CCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCC
Q psy12614 520 KSHVVIWKNGQHHA-SLPR----YRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLP 594 (708)
Q Consensus 520 d~~i~iw~~~~~~~-~~~~----~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (708)
++-+..|+..+... .+.. ....|.++...++|.+.+ ++.+|-+..||..+++..... ..-.-....
T Consensus 514 ~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-~T~~Glv~~~d~~~~~~~~~~--------~~~gl~~~~ 584 (781)
T 3v9f_A 514 GGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWL-ATGEGLVCFPSARNFDYQVFQ--------RKEGLPNTH 584 (781)
T ss_dssp SSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEE-EETTEEEEESCTTTCCCEEEC--------GGGTCSCCC
T ss_pred CCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEE-EECCCceEEECCCCCcEEEcc--------ccCCCCCce
Confidence 34477788773322 2221 235688999988888665 444665488998877654211 110012345
Q ss_pred eeEEEeCCCCCceEEEEcCeeEEEEecC
Q psy12614 595 VLGIEFDPQDSSLIYLMDDSALCVINKN 622 (708)
Q Consensus 595 i~~l~~s~~~~~l~~~~~d~~i~~wd~~ 622 (708)
|.++...++|...+. +..| |..+|..
T Consensus 585 i~~i~~d~~g~lW~~-t~~G-l~~~~~~ 610 (781)
T 3v9f_A 585 IRAISEDKNGNIWAS-TNTG-ISCYITS 610 (781)
T ss_dssp CCEEEECSSSCEEEE-CSSC-EEEEETT
T ss_pred EEEEEECCCCCEEEE-cCCc-eEEEECC
Confidence 788999988875443 4455 7777764
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.64 E-value=5.2e-14 Score=134.88 Aligned_cols=235 Identities=12% Similarity=-0.039 Sum_probs=165.5
Q ss_pred cEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEe
Q psy12614 28 VINCIACEPKSSRLA-VSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIK 104 (708)
Q Consensus 28 ~v~~~~~s~~~~~la-~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~ 104 (708)
...+++++|+|++.+ +...++.|.+||..++.... ....+. ..+.+++++ ++.+++.. ++.|.+||..+....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~~~~~~--~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-LPFNGL--YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-CCCCSC--CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-EeeCCc--CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe
Confidence 788999999999776 44678899999987654322 212233 567889998 56555544 889999998775543
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEc
Q psy12614 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDI 183 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~ 183 (708)
.........+.+++++++|+++++...++.|.+|+..+.... .........+..++++++|+.+++...+ .|.+||.
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT--VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE--ECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE--eeccccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence 222223357899999999997777677889999976655443 2222233467889999999977777666 9999998
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEE
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCA 262 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 262 (708)
..+....... .....+.++++.++|. +++...++.|.+|+............+...+.+++++++|+.+++.
T Consensus 179 ~~~~~~~~~~-------~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 251 (270)
T 1rwi_B 179 ESNNQVVLPF-------TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVAD 251 (270)
T ss_dssp TTCCEEECCC-------SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEE
T ss_pred CCCceEeecc-------cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEE
Confidence 7665433211 1135688999999997 4555567899999987654433322334678999999999988888
Q ss_pred ecCCeEEEEEccC
Q psy12614 263 GVDPTVVCFQRTR 275 (708)
Q Consensus 263 ~~dg~i~iw~~~~ 275 (708)
..++.|+++++..
T Consensus 252 ~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 252 RGNDRVVKLTSLE 264 (270)
T ss_dssp GGGTEEEEECCCG
T ss_pred CCCCEEEEEcCCC
Confidence 8899999999876
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.63 E-value=1.9e-13 Score=130.15 Aligned_cols=212 Identities=12% Similarity=0.049 Sum_probs=164.3
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeec-CCc
Q psy12614 37 KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVT-SGT 113 (708)
Q Consensus 37 ~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-~~~ 113 (708)
.+++|++++.++.|.+||.++++.+- .+..+. ...+.+++++ |+.|+ +.++.|..||. +++.+..+..+ ...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w-~~~~~~-~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVW-EYPLEK-GWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEE-EEECCT-TCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEE-EeCCCc-cCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 45789999999999999999999886 566543 1367888888 77777 45788999999 89999998865 357
Q ss_pred eEEEEEecCCCEEEEEeC-CCcEEEEEccCCcEEEEEecc----cccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCc
Q psy12614 114 CWCLSVHKKKRLLAAGTE-QGHINLFQISDEGLLYEKLLD----RQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGH 187 (708)
Q Consensus 114 v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~ 187 (708)
+.++.+.++|+++++.+. ++.|..+|. +++.+....+. .+......+++.++|+++++...+ .|..||.+ |+
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 899999999999999887 777877775 56665333332 122345566789999999999988 99999988 99
Q ss_pred eEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccc------cCeEEEEEeCCCCEEE
Q psy12614 188 AIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHK------KDILALTVSEDENYLY 260 (708)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~------~~i~~~~~s~~~~~l~ 260 (708)
.+.++... ..+.++...++|. ++++..++.|..+|..+|+.+..+..+. ..+..++..++|+.++
T Consensus 157 ~~w~~~~~--------~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v 228 (276)
T 3no2_A 157 LLNSVKLS--------GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYI 228 (276)
T ss_dssp EEEEEECS--------SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEE
T ss_pred EEEEEECC--------CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEE
Confidence 99888753 2345677788886 5566667789999999999988886432 2378888999998888
Q ss_pred EEe
Q psy12614 261 CAG 263 (708)
Q Consensus 261 ~~~ 263 (708)
+..
T Consensus 229 ~~~ 231 (276)
T 3no2_A 229 CNW 231 (276)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 196
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.62 E-value=2.8e-13 Score=148.86 Aligned_cols=270 Identities=7% Similarity=-0.005 Sum_probs=180.5
Q ss_pred CCCCEEEEEeCCC-----cEEEEeCCCCCeEEEEEe------cCCCCCcEEEEEEe--CCEEEEEcCCC-----cEEEEE
Q psy12614 36 PKSSRLAVSRADQ-----SIEIWDISETPHVDRVFI------GDPLSNSIECLTWF--NDRLFSGGLQG-----FVNEYD 97 (708)
Q Consensus 36 ~~~~~la~~~~dg-----~v~iwd~~~~~~~~~~~~------~h~~~~~v~~l~~~--~~~l~s~~~d~-----~i~vwd 97 (708)
|+|++++....++ .+.+.+...+.... .+. +|. ..+..++|| |++|+.+..++ +|++||
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-lld~~~l~~~~~--~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d 157 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARV-FLDPNILSDDGT--VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMK 157 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEE-EECGGGGCTTSC--EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEE
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEE-EECHHHhccCCC--EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 8999988764332 34444544444321 332 233 468899999 88888665433 899999
Q ss_pred CCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCc----------------EEEEEccCCcE--EEEEecccccccEE
Q psy12614 98 MRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGH----------------INLFQISDEGL--LYEKLLDRQQGRIL 159 (708)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~----------------i~iwd~~~~~~--~~~~~~~~~~~~v~ 159 (708)
+.+++.+.....+ ..+..++|+|||+.|+.++.++. |++|++.++.. ........+...+.
T Consensus 158 ~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~ 236 (710)
T 2xdw_A 158 VDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMG 236 (710)
T ss_dssp TTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred CCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEE
Confidence 9999877643332 23678999999999999888765 99999988762 11123333556688
Q ss_pred EEEECCCCCEEEEecC-----C-eEEEEEcCC------Cc-eEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcC---
Q psy12614 160 CTAWHSSGDYLVTGCA-----A-AVRVWDIHK------GH-AIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDS--- 222 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~~-----d-~i~iwd~~~------~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~--- 222 (708)
.+.|+|||++|+..+. + .|.+||+.+ +. ....+... ...+.. .|+|+| .++..+.
T Consensus 237 ~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~-------~~~~~~-~~s~dg~~l~~~s~~~~ 308 (710)
T 2xdw_A 237 GAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN-------FEGEYD-YVTNEGTVFTFKTNRHS 308 (710)
T ss_dssp EEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS-------SSSCEE-EEEEETTEEEEEECTTC
T ss_pred EEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC-------CCcEEE-EEeccCCEEEEEECCCC
Confidence 9999999999987654 6 899999986 53 34455433 222333 477877 4544433
Q ss_pred -CCcEEEEeCCCCe--eEEEeecccc--CeEEEEEeCCCCEEEEEecCCe--EEEEEccCCcccccCCCCCCCCcceEEe
Q psy12614 223 -GGFVRFWDGKTGV--QWSDVKTHKK--DILALTVSEDENYLYCAGVDPT--VVCFQRTRKPQVCSTSGPEQGSSVWVRS 295 (708)
Q Consensus 223 -dg~i~~wd~~~~~--~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~dg~--i~iw~~~~~~~~~~~~g~~~~~~~~~~~ 295 (708)
.+.|.+||+.++. ....+..+.. .+..++|++++.++++...++. |.+|++.+ |+ ..
T Consensus 309 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~--------g~--------~~ 372 (710)
T 2xdw_A 309 PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT--------GA--------LL 372 (710)
T ss_dssp TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT--------CC--------EE
T ss_pred CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCC--------CC--------EE
Confidence 2469999998764 2344444433 6778999987878888888885 55667655 54 34
Q ss_pred EEEeccccceEEEEEe--CCEEEEE-c---CCCeEEEEeCCCCc
Q psy12614 296 VNRVIHEGDVKSLALH--GNRLYSG-G---LDSYLSLSYYPPKT 333 (708)
Q Consensus 296 ~~~~~~~~~v~~l~~~--~~~l~s~-~---~d~~i~iw~~~~~~ 333 (708)
..+..+.+.+..++++ ++.++.. + ..+.+..||+.++.
T Consensus 373 ~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 373 KIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 5566667778888887 5455432 2 34689999987654
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.61 E-value=8.3e-12 Score=121.52 Aligned_cols=275 Identities=8% Similarity=-0.019 Sum_probs=190.1
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCC
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~ 101 (708)
.....+.+++++++|++.++...++.|.+||.. ++.....+..+. ..+.++++. +...++...++.|..||.. +
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPD--AKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT--CCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCC--CcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 345688999999999988777678899999988 665543333444 679999998 6666666668899999988 5
Q ss_pred eEeE-EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEE
Q psy12614 102 NIKS-STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVR 179 (708)
Q Consensus 102 ~~~~-~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~ 179 (708)
+... .+......+.++++.++|+++++...++.|..+|.. ++... ..+......+..+++.++++..++...+ .|.
T Consensus 93 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 93 GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE-YDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE-ccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 5432 222244678999999999887776667889999987 65542 2333345678999999999976666656 999
Q ss_pred EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEc-CCCcEEEEeCCCCeeEEE-eeccccCeEEEEEeCCCC
Q psy12614 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGD-SGGFVRFWDGKTGVQWSD-VKTHKKDILALTVSEDEN 257 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~-~~~~~~~i~~~~~s~~~~ 257 (708)
.+|. +++... +... .....+..+++.++|.+..+. ..+.|.+||. +++.... +..+...+.+++++++|+
T Consensus 171 ~~~~-~g~~~~-~~~~-----~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~ 242 (300)
T 2qc5_A 171 RITN-TGKLEE-YPLP-----TNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSE 242 (300)
T ss_dssp EECT-TCCEEE-EECS-----STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC
T ss_pred EECC-CCcEEE-eeCC-----CCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCC
Confidence 9998 665543 3322 124568899999999755554 5678999998 5554332 333456788999999998
Q ss_pred EEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeC
Q psy12614 258 YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 258 ~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~ 329 (708)
..++...++.|..|+.. ++ . ....+......+.++++. ...|..++.. .|..++.
T Consensus 243 l~v~~~~~~~i~~~~~~---------g~------~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~~~p 298 (300)
T 2qc5_A 243 IWFTEWGANQIGRITND---------NT------I-QEYQLQTENAEPHGITFGKDGSVWFALKC-KIGKLNL 298 (300)
T ss_dssp EEEEETTTTEEEEECTT---------SC------E-EEEECCSTTCCCCCEEECTTSCEEEECSS-EEEEEEE
T ss_pred EEEeccCCCeEEEECCC---------Cc------E-EEEECCccCCccceeEeCCCCCEEEEccC-ceEEeCC
Confidence 66666567899999984 32 0 111122234567788887 3334444444 6655554
No 198
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.60 E-value=1.5e-12 Score=123.99 Aligned_cols=186 Identities=12% Similarity=0.108 Sum_probs=149.5
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecC-CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccc-cccE
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTS-GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQ-QGRI 158 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~v 158 (708)
++.|++++.++.|.+||.++|+.+.++..+. ..+.+++++|+|++++ +.++.|..||. +++.+. .+..+ ...+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W--~~~~~~~~~~ 79 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELW--NIAAPAGCEM 79 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEE--EEECCTTCEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEE--EEcCCCCccc
Confidence 6788999999999999999999999998776 4789999999999888 45778999999 788774 33333 3468
Q ss_pred EEEEECCCCCEEEEecC-C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCe
Q psy12614 159 LCTAWHSSGDYLVTGCA-A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGV 235 (708)
Q Consensus 159 ~~~~~s~d~~~l~~~~~-d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~ 235 (708)
.++.+.+||+.+++.+. + .|..+|. +|+.+.++....... .+......+++.++|. +++...++.|..||.+ |+
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~-~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIE-RPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCS-SGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCC-cccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 89999999999999887 6 8888885 788888877542100 1123345567888996 7778889999999987 99
Q ss_pred eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 236 QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 236 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.+.++... ..+.++...++++.++++..++.|..+|..+
T Consensus 157 ~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~t 195 (276)
T 3no2_A 157 LLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLES 195 (276)
T ss_dssp EEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTT
T ss_pred EEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcC
Confidence 98888754 4556788899999999888888999999998
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.58 E-value=3.4e-12 Score=124.63 Aligned_cols=292 Identities=11% Similarity=0.060 Sum_probs=197.6
Q ss_pred EEEEcCCCCEEEEEeC-----CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc----------CCCcE
Q psy12614 31 CIACEPKSSRLAVSRA-----DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG----------LQGFV 93 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~-----dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~----------~d~~i 93 (708)
.....|+++++.+... ++.|.+.|..+++.+. .+.... .+ . ++++ |+++++++ .++.|
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~-~I~vG~--~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIG-MIDGGF--LP-N-PVVADDGSFIAHASTVFSRIARGERTDYV 111 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEE-EEEECS--SC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEE-EEECCC--CC-c-EEECCCCCEEEEEcccccccccCCCCCEE
Confidence 3556799999888865 5799999999999887 555444 44 4 9999 88887765 36789
Q ss_pred EEEECCCCeEeEEEeecC-------CceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEEC
Q psy12614 94 NEYDMRRLNIKSSTAVTS-------GTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWH 164 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~-------~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 164 (708)
.+||..+++.+..+.... .....++|+|||++|+++.. ++.|.++|..+++.+......+. ...+.
T Consensus 112 sviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-----~~~~P 186 (386)
T 3sjl_D 112 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-----YHIFP 186 (386)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-----EEEEE
T ss_pred EEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-----ceeec
Confidence 999999999988876432 24667999999999988764 68999999999998743333221 22233
Q ss_pred CCCCEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEE-EEEE-ccCCEEEEEcCCCcEEEEeCCCCe--eEE
Q psy12614 165 SSGDYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVW-CVAF-CADFTIITGDSGGFVRFWDGKTGV--QWS 238 (708)
Q Consensus 165 ~d~~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~-~~~~-~~~~~l~~~~~dg~i~~wd~~~~~--~~~ 238 (708)
...+.+++.+.| .+.+.++.+ ++......... . .....+. ...| .++|+++..+.+|.|++.|..++. .+.
T Consensus 187 ~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~--~-~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~ 263 (386)
T 3sjl_D 187 TAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVF--H-PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLP 263 (386)
T ss_dssp EETTEEEEEETTSCEEEEECCSSSCCEEEECCCC--S-CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECC
T ss_pred CCCceeEEECCCCCEEEEECCCCCeEEEeeccee--c-cccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeec
Confidence 344566676777 777788765 55432221110 0 0012221 2355 478887767778999999997654 222
Q ss_pred Eee----------ccccCeEEEEEeCCCCEEEEEec----------CCeEEEEEccCCcccccCCCCCCCCcceEEeEEE
Q psy12614 239 DVK----------THKKDILALTVSEDENYLYCAGV----------DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR 298 (708)
Q Consensus 239 ~~~----------~~~~~i~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~ 298 (708)
.+. ........+++++++++++.... .+.|.++|..+ ++ ....+
T Consensus 264 ~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t--------~k--------v~~~i 327 (386)
T 3sjl_D 264 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT--------GE--------RLAKF 327 (386)
T ss_dssp CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT--------CC--------EEEEE
T ss_pred ceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCC--------Ce--------EEEEE
Confidence 221 01234456888999999988753 24799999988 65 23333
Q ss_pred eccccceEEEEEe--CC-EEEE-EcCCCeEEEEeCCCCceeecCccCCCCceEEEEcC
Q psy12614 299 VIHEGDVKSLALH--GN-RLYS-GGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKD 352 (708)
Q Consensus 299 ~~~~~~v~~l~~~--~~-~l~s-~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~ 352 (708)
.. ...+.+++++ ++ +|++ ...++.|.++|..+.+.........++..+.+++|
T Consensus 328 ~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 328 EM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred EC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 22 2367789998 54 5555 45689999999998874444335567777888876
No 200
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.58 E-value=2.5e-12 Score=125.58 Aligned_cols=296 Identities=11% Similarity=0.049 Sum_probs=191.7
Q ss_pred EEEecCCCEEEEEeC-----CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec----------CC-eEEE
Q psy12614 117 LSVHKKKRLLAAGTE-----QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC----------AA-AVRV 180 (708)
Q Consensus 117 ~~~s~~~~~la~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~----------~d-~i~i 180 (708)
....|+++.+++... ++.|.++|..+++.+ ..+.....+ . ++++|||+++++++ .+ .|.+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~--~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVI--GMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEE--EEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEE--EEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 455789998888765 679999999999887 444433344 4 99999999988775 24 8999
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC--CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCC
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS--GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDEN 257 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~ 257 (708)
||..+++.+..+..+...+.........++|+|||+ ++++.. ++.|.++|+.+++.+.++.... . ...+....+
T Consensus 114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~ 190 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPD 190 (386)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETT
T ss_pred EECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCc
Confidence 999999999998765200000012355789999996 555543 6899999999999998886422 1 233433456
Q ss_pred EEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE--EeccccceE-EEEEe--CCEEEEEcCCCeEEEEeCCCC
Q psy12614 258 YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN--RVIHEGDVK-SLALH--GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 258 ~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~v~-~l~~~--~~~l~s~~~d~~i~iw~~~~~ 332 (708)
.+++.+.||.+.+.++.+. ++ ...... +..-...+. ...|. +..++..+.+|.+.+.|+.+.
T Consensus 191 ~~~~~~~DG~~~~v~~~~~-------g~------v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~ 257 (386)
T 3sjl_D 191 TFFMHCRDGSLAKVAFGTE-------GT------PEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSG 257 (386)
T ss_dssp EEEEEETTSCEEEEECCSS-------SC------CEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTS
T ss_pred eeEEECCCCCEEEEECCCC-------Ce------EEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCC
Confidence 7777788888888887650 11 000000 000011121 23553 444545667899999999766
Q ss_pred ceeecC------------c-cCCCCceEEEEcCCcEEEEEc-----------CCeEEEEEecCCCCCCCCCCCCCCcccC
Q psy12614 333 TLVKYP------------C-TLAQSTPVSLAKDIQHVLLQY-----------TSHLELWSLGSAQSTDLSSHSNTTGVPL 388 (708)
Q Consensus 333 ~~~~~~------------~-~~~~~~~~~~s~~~~~l~~~~-----------~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 388 (708)
...... + .......++++++++.+.... .+.|.++|..+.+
T Consensus 258 ~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k--------------- 322 (386)
T 3sjl_D 258 DAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE--------------- 322 (386)
T ss_dssp SCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---------------
T ss_pred cceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe---------------
Confidence 421111 0 012335688899998887742 2468888888866
Q ss_pred CCCceEEEEEEecCCCceEEEEeCCCCc-EEEEE-c-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecC
Q psy12614 389 LSFPRLIVKMSAVNNATIRCSVVSNDGK-YVAYS-T-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISAD 463 (708)
Q Consensus 389 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~-~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d 463 (708)
.+.++..+ ..+..+++++|++ +|+++ . ++.|.++|..+ .+ .+.++. ..+|.. . |.+++|
T Consensus 323 -----v~~~i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t--~k-~~~~i~-~~~~p~--~---l~~s~d 384 (386)
T 3sjl_D 323 -----RLAKFEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDAES--GE-ELRSVN-QLGHGP--Q---VITTAD 384 (386)
T ss_dssp -----EEEEEEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEETTT--CC-EEEEEC-CCCSSC--C---EEEECC
T ss_pred -----EEEEEECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEECCC--Cc-EEEEec-CCCCCc--e---eEECCc
Confidence 44444443 3678999999997 66663 3 89999999876 33 444443 344432 4 777776
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.57 E-value=9.4e-13 Score=129.24 Aligned_cols=241 Identities=10% Similarity=0.027 Sum_probs=168.5
Q ss_pred CCCCcEEEEEEcCCCCEEEE-------EeCCCcEEEEeCCCCCeEEEEE---ecCCCCCcEEEEEEe-C-CEEEEEcCCC
Q psy12614 24 PEPKVINCIACEPKSSRLAV-------SRADQSIEIWDISETPHVDRVF---IGDPLSNSIECLTWF-N-DRLFSGGLQG 91 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~-------~~~dg~v~iwd~~~~~~~~~~~---~~h~~~~~v~~l~~~-~-~~l~s~~~d~ 91 (708)
..-....+++|+++|+++++ +..++.|.+||..+++...... .++. ..+.+++++ . ..|+.++..+
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~--~~~~~i~~~~~~g~l~v~~~~~ 92 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYG--GIPAGCQCDRDANQLFVADMRL 92 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEE--CCEEEEEECSSSSEEEEEETTT
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCC--CCCceEEEecCCCcEEEEECCC
Confidence 33456789999999988877 5678899999998887643121 1244 678999998 5 7777776666
Q ss_pred cEEEEECCCCeEeEE-Eee----cCCceEEEEEecCCCEEEEEeCC---------------CcEEEEEccCCcEEEEEec
Q psy12614 92 FVNEYDMRRLNIKSS-TAV----TSGTCWCLSVHKKKRLLAAGTEQ---------------GHINLFQISDEGLLYEKLL 151 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~-~~~----~~~~v~~~~~s~~~~~la~~~~d---------------~~i~iwd~~~~~~~~~~~~ 151 (708)
.|.+||.+ ++.... ... ....+.+++++++|+++++...+ +.|..||.. ++.. .+
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~---~~ 167 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI---QV 167 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE---EE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE---Ee
Confidence 89999998 665433 221 12358899999999887776554 567777765 5543 22
Q ss_pred ccccccEEEEEEC----CCCCEEEEe-cCC-eEEEEEcC-CCceEE--EEEecccCCCCCc-eeEEEEEEccCCEEE-EE
Q psy12614 152 DRQQGRILCTAWH----SSGDYLVTG-CAA-AVRVWDIH-KGHAIH--KMSLDKSSKFSKN-TAVWCVAFCADFTII-TG 220 (708)
Q Consensus 152 ~~~~~~v~~~~~s----~d~~~l~~~-~~d-~i~iwd~~-~~~~~~--~~~~~~~~~~~~~-~~v~~~~~~~~~~l~-~~ 220 (708)
..+......++|+ |+++.|+.+ ..+ .|.+||+. +++... .+.... .+. ..+..+++.++|++. +.
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~----~~~~~~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP----GTHEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC----CCSSCEEEEEEEBTTCCEEEEE
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC----CCCCCCCCceEECCCCCEEEEE
Confidence 2233456889999 999766555 455 99999986 454221 111110 112 567889999999854 44
Q ss_pred cCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEE-ecCCeEEEEEccC
Q psy12614 221 DSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCA-GVDPTVVCFQRTR 275 (708)
Q Consensus 221 ~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~iw~~~~ 275 (708)
..++.|.+||..+++.+..+..+...+.+++++|+++.|+++ ..++.|..|+...
T Consensus 244 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 244 WGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp ETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred cCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 467899999998787777777666889999999999966555 4567899999875
No 202
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.57 E-value=3.4e-13 Score=147.69 Aligned_cols=274 Identities=9% Similarity=-0.044 Sum_probs=177.4
Q ss_pred cCCCCEEEEEeCCC---cEEEE--eCCCCCeEEEEEe------cCCCCCcEEEEEEe--CCEEE-----EEcCCCcEEEE
Q psy12614 35 EPKSSRLAVSRADQ---SIEIW--DISETPHVDRVFI------GDPLSNSIECLTWF--NDRLF-----SGGLQGFVNEY 96 (708)
Q Consensus 35 s~~~~~la~~~~dg---~v~iw--d~~~~~~~~~~~~------~h~~~~~v~~l~~~--~~~l~-----s~~~d~~i~vw 96 (708)
+|+|++++....++ .-.|| +...+.... .+. +|. ..+.+++|| |++|| .|+.+.+|++|
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-l~d~~~~a~~~~--~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~ 152 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKV-LLDPNGWSKDGT--VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVI 152 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEE-EECGGGSSSSSC--EEEEEEEECTTSSEEEEEEEETTCSCCEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEE-EEchHHhccCCC--EEEEEEEECCCCCEEEEEECCCCCceEEEEEE
Confidence 48999998876543 34444 444444322 333 344 579999999 88888 34445789999
Q ss_pred ECCCCeEe-EEEeecCCceEEEEEecCCCEEEEEeCCCc-------------EEEEEccCCcE--EEEEecccccccEEE
Q psy12614 97 DMRRLNIK-SSTAVTSGTCWCLSVHKKKRLLAAGTEQGH-------------INLFQISDEGL--LYEKLLDRQQGRILC 160 (708)
Q Consensus 97 d~~~~~~~-~~~~~~~~~v~~~~~s~~~~~la~~~~d~~-------------i~iwd~~~~~~--~~~~~~~~~~~~v~~ 160 (708)
|+.+++.+ .. .........++|+|||+.|+.++.|.. |++|++.++.. ........+...+..
T Consensus 153 dl~tg~~~~~~-~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~ 231 (695)
T 2bkl_A 153 DVDSGEWSKVD-VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQ 231 (695)
T ss_dssp ETTTCCBCSSC-CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEE
T ss_pred ECCCCCCcCCc-ccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEE
Confidence 99998865 21 111111267999999999999988766 99999998762 211344455667899
Q ss_pred EEECCCCCEEEEecC----C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcC----CCcEEEEeC
Q psy12614 161 TAWHSSGDYLVTGCA----A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDS----GGFVRFWDG 231 (708)
Q Consensus 161 ~~~s~d~~~l~~~~~----d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~----dg~i~~wd~ 231 (708)
+.|+|||++|+..+. . .|.+|+..+++. ..+... ...+....+ ++|.++..+. ++.|.+||+
T Consensus 232 ~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~-------~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~ 302 (695)
T 2bkl_A 232 SDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKG-------VGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDP 302 (695)
T ss_dssp EEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEEC-------SSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBT
T ss_pred EEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecC-------CCceEEEEe-cCCcEEEEECCCCCCCEEEEEeC
Confidence 999999998876542 2 677787655543 344433 233344445 5665444332 578999999
Q ss_pred CCCee---EEEeecc-ccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc-ccceE
Q psy12614 232 KTGVQ---WSDVKTH-KKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH-EGDVK 306 (708)
Q Consensus 232 ~~~~~---~~~~~~~-~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~v~ 306 (708)
.+++. ...+..+ ...+..++++ ++.++++...|+..++|.+.. .|+ ....+..+ .+.+.
T Consensus 303 ~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~-------~g~--------~~~~l~~~~~~~v~ 366 (695)
T 2bkl_A 303 AKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATL-------KGK--------PVRTVQLPGVGAAS 366 (695)
T ss_dssp TBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEET-------TCC--------EEEECCCSSSSEEC
T ss_pred CCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC-------CCC--------eeEEecCCCCeEEE
Confidence 87753 3333333 4467888888 677888888899888887652 022 23334444 45566
Q ss_pred EEEEe--CCEEEE----EcCCCeEEEEeCCCCceeec
Q psy12614 307 SLALH--GNRLYS----GGLDSYLSLSYYPPKTLVKY 337 (708)
Q Consensus 307 ~l~~~--~~~l~s----~~~d~~i~iw~~~~~~~~~~ 337 (708)
.++++ ++.++. ....+.+.+||+.++....+
T Consensus 367 ~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l 403 (695)
T 2bkl_A 367 NLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELW 403 (695)
T ss_dssp CCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 67776 555552 23357899999988764433
No 203
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.56 E-value=2.5e-12 Score=126.51 Aligned_cols=258 Identities=6% Similarity=-0.077 Sum_probs=178.4
Q ss_pred CCCcEEEEECCCCeEeEEEe------ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEE
Q psy12614 89 LQGFVNEYDMRRLNIKSSTA------VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTA 162 (708)
Q Consensus 89 ~d~~i~vwd~~~~~~~~~~~------~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 162 (708)
.+++|.++|.++++....+. ........+++. +++.+++...++.|.+||..+++.+ ..+. .......++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~--~~i~-~~~~p~~i~ 90 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEV--GRIT-GFTSPRYIH 90 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEE--EEEE-CCSSEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEE--EEcC-CCCCCcEEE
Confidence 37899999999998765441 122346778874 3445555566799999999999886 3443 345688999
Q ss_pred ECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEc--CCCcEEEEeCCCCeeEEE
Q psy12614 163 WHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGD--SGGFVRFWDGKTGVQWSD 239 (708)
Q Consensus 163 ~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~--~dg~i~~wd~~~~~~~~~ 239 (708)
++++++..++...+ .|.+||..+++....+..+... ........+++ .++++++++ .++.|.++|..+++.+..
T Consensus 91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~--~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~ 167 (328)
T 3dsm_A 91 FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMD--MESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDE 167 (328)
T ss_dssp EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCC--TTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCcc--ccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEE
Confidence 99998544444366 9999999999988887764200 00114456666 566755554 488999999999998888
Q ss_pred eeccccCeEEEEEeCCCCEEEEEecC----------CeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc-ccceEEE
Q psy12614 240 VKTHKKDILALTVSEDENYLYCAGVD----------PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH-EGDVKSL 308 (708)
Q Consensus 240 ~~~~~~~i~~~~~s~~~~~l~~~~~d----------g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~v~~l 308 (708)
+.. ......++++|+|++++++..+ +.|.++|..+ ++ ....+... ......+
T Consensus 168 i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t--------~~--------v~~~~~~~~g~~p~~l 230 (328)
T 3dsm_A 168 LTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET--------FT--------VEKQFKFKLGDWPSEV 230 (328)
T ss_dssp EEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT--------TE--------EEEEEECCTTCCCEEE
T ss_pred EEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC--------Ce--------EEEEEecCCCCCceeE
Confidence 764 3445789999999876666544 7899999987 53 22233222 2368899
Q ss_pred EEe--CCEEEEEcCCCeEEEEeCCCCceeecC-cc--CCCCceEEEEc-CCcEEEEE-----cCCeEEEEEecCCC
Q psy12614 309 ALH--GNRLYSGGLDSYLSLSYYPPKTLVKYP-CT--LAQSTPVSLAK-DIQHVLLQ-----YTSHLELWSLGSAQ 373 (708)
Q Consensus 309 ~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~-~~--~~~~~~~~~s~-~~~~l~~~-----~~~~i~i~~~~~~~ 373 (708)
+++ ++.|+.+.. .|.+||..+..+.... .. ...+..++++| ++.+.++. .++.|.+|+.. ++
T Consensus 231 a~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 231 QLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp EECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred EEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 999 777777665 8999999887653221 01 23456799999 55555554 35789999987 44
No 204
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.54 E-value=1.4e-12 Score=124.77 Aligned_cols=235 Identities=10% Similarity=-0.085 Sum_probs=162.1
Q ss_pred cEEEEEEe--CCEEE-EEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEE
Q psy12614 73 SIECLTWF--NDRLF-SGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK 149 (708)
Q Consensus 73 ~v~~l~~~--~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~ 149 (708)
...+++++ ++.++ +...++.|.+||..++........+...+.+++++++|+++++.. ++.|.+||..+.... .
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~--~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT--V 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE--E
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe--e
Confidence 78899998 66555 436789999999876553322223345788999999998666554 889999998876553 2
Q ss_pred ecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEE-EEEcCCCcEE
Q psy12614 150 LLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTI-ITGDSGGFVR 227 (708)
Q Consensus 150 ~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~~~~dg~i~ 227 (708)
........+..++++++|+.+++...+ .|.+|+..+........ .....+.++++.++|++ ++...++.|.
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~-------~~~~~p~~i~~~~~g~l~v~~~~~~~i~ 174 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF-------TGLNDPDGVAVDNSGNVYVTDTDNNRVV 174 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC-------CSCCSCCCEEECTTCCEEEEEGGGTEEE
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc-------ccCCCceeEEEeCCCCEEEEECCCCEEE
Confidence 222233568999999999977776666 89999765544332111 11345778999999974 4555578999
Q ss_pred EEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEE
Q psy12614 228 FWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS 307 (708)
Q Consensus 228 ~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 307 (708)
+||...+........+...+.+++++++|+.+++...++.|.+|+... .. .......+...+.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~--------~~--------~~~~~~~~~~~p~~ 238 (270)
T 1rwi_B 175 KLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS--------TT--------STVLPFTGLNTPLA 238 (270)
T ss_dssp EECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC--------SC--------CEECCCCSCSCEEE
T ss_pred EEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC--------Cc--------ceeeccCCCCCcee
Confidence 999877665444333446788999999997777776788999999876 32 11111122356888
Q ss_pred EEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 308 LALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 308 l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
++++ ++++++...++.|+++++....
T Consensus 239 i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 239 VAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 9998 7788888899999999987653
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.52 E-value=6.7e-11 Score=117.73 Aligned_cols=263 Identities=11% Similarity=-0.032 Sum_probs=176.8
Q ss_pred CCEEEEEcC--CC---cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEe----------CCCcEEEEEccCCcE
Q psy12614 81 NDRLFSGGL--QG---FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT----------EQGHINLFQISDEGL 145 (708)
Q Consensus 81 ~~~l~s~~~--d~---~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----------~d~~i~iwd~~~~~~ 145 (708)
++++++... .+ +|.++|..+++.+..+..-..+ .++++|||++|+++. .++.|.+||..+.+.
T Consensus 32 ~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~ 109 (373)
T 2mad_H 32 GRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP 109 (373)
T ss_pred CCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE
Confidence 455555543 22 8899999999988877754443 999999999999875 367899999998877
Q ss_pred EEEEecc--cc---cccEEEEEECCCCCEEEEecC--C-eEEEEEcCCCceEEE-EEecccCCCCCceeEEEEEEccCC-
Q psy12614 146 LYEKLLD--RQ---QGRILCTAWHSSGDYLVTGCA--A-AVRVWDIHKGHAIHK-MSLDKSSKFSKNTAVWCVAFCADF- 215 (708)
Q Consensus 146 ~~~~~~~--~~---~~~v~~~~~s~d~~~l~~~~~--d-~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~- 215 (708)
+....+. .. ......++|+|||++|++++. + .|.++| .+++.+.. +..+ . ++.+.|++
T Consensus 110 ~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~--------~---~~~~~~~~~ 177 (373)
T 2mad_H 110 IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP--------T---CYHIHPGAP 177 (373)
T ss_pred EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC--------c---eEEEEeCCC
Confidence 6333232 00 123458999999999998763 4 899999 99998877 6542 1 24455666
Q ss_pred -EEEEEcCCCcEEEEeCCCCeeEEEee-----ccccC-eEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCC
Q psy12614 216 -TIITGDSGGFVRFWDGKTGVQWSDVK-----THKKD-ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQG 288 (708)
Q Consensus 216 -~l~~~~~dg~i~~wd~~~~~~~~~~~-----~~~~~-i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~ 288 (708)
.+++.+.||.+.++|. +++...... ....+ .....+.+++..++..+..+.+.+.|+.. +.
T Consensus 178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~--------~~--- 245 (373)
T 2mad_H 178 STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISA--------AG--- 245 (373)
T ss_pred ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccC--------Cc---
Confidence 3777888999999999 887663322 11112 12356677766655555788999999875 21
Q ss_pred CcceEEeEEEec----------cccceEEEEEe--CCEEEEEcC----------CCeEEEEeCCCCce-eecCccCCCCc
Q psy12614 289 SSVWVRSVNRVI----------HEGDVKSLALH--GNRLYSGGL----------DSYLSLSYYPPKTL-VKYPCTLAQST 345 (708)
Q Consensus 289 ~~~~~~~~~~~~----------~~~~v~~l~~~--~~~l~s~~~----------d~~i~iw~~~~~~~-~~~~~~~~~~~ 345 (708)
... ...+.. .......+.++ ++.++.+.. ++.|.++|..+.+. ..+. ......
T Consensus 246 -~~v--~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~ 321 (373)
T 2mad_H 246 -ATN--KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVD 321 (373)
T ss_pred -ceE--eeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcC
Confidence 000 111110 11223335566 566665432 35799999998875 4454 334578
Q ss_pred eEEEEcCCc-EEEEE--cCCeEEEEEecCCC
Q psy12614 346 PVSLAKDIQ-HVLLQ--YTSHLELWSLGSAQ 373 (708)
Q Consensus 346 ~~~~s~~~~-~l~~~--~~~~i~i~~~~~~~ 373 (708)
.++++|||+ ++++. .++.|.++|..+.+
T Consensus 322 ~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 322 AISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred eEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 999999999 66664 47899999998866
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.52 E-value=1.9e-10 Score=111.74 Aligned_cols=269 Identities=11% Similarity=0.068 Sum_probs=187.7
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeE-EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKS-STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE 148 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~-~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~ 148 (708)
..+.++++. +...++...++.|.+||.. ++... .+......+.+++++++++++++...++.|..||.. ++...
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~- 96 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE- 96 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE-
Confidence 678999998 6666666678999999988 55443 222334678999999999877776667889999988 65531
Q ss_pred EecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEE-EcCCCcE
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIIT-GDSGGFV 226 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~-~~~dg~i 226 (708)
.........+..+++.++|+++++...+ .|..+|.. ++.. .+... .....+..+++.++|++.. ...++.|
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~-----~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLP-----NKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECS-----STTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCC-----CCCCCceeEEECCCCCEEEEecCCCeE
Confidence 2333344678999999999988877766 99999987 6554 23222 1245688999999998554 4457889
Q ss_pred EEEeCCCCeeEEE-eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccce
Q psy12614 227 RFWDGKTGVQWSD-VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDV 305 (708)
Q Consensus 227 ~~wd~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v 305 (708)
..+|. +++.... ...+...+..++++++++..++....+.|..|+. + ++ . .......+...+
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~--------g~------~-~~~~~~~~~~~~ 232 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-T--------GE------I-SEYDIPTPNARP 232 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T--------CC------E-EEEECSSTTCCE
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-C--------Cc------E-EEEECCCCCCCc
Confidence 99998 5654432 2234457889999999987776666778999998 4 32 1 111122345668
Q ss_pred EEEEEe--CCEEEEEcCCCeEEEEeCCCCceeec--CccCCCCceEEEEcCCcEEEEEcCCeEEEEEe
Q psy12614 306 KSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKY--PCTLAQSTPVSLAKDIQHVLLQYTSHLELWSL 369 (708)
Q Consensus 306 ~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~--~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~ 369 (708)
.+++++ +.+.++...++.|..++.. ..+..+ ......+..++++++|++.++... .|..++.
T Consensus 233 ~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~~~p 298 (300)
T 2qc5_A 233 HAITAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALKC-KIGKLNL 298 (300)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECSS-EEEEEEE
T ss_pred eEEEECCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEccC-ceEEeCC
Confidence 889888 6666666667899999984 343333 222446678999999997777664 6666664
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.52 E-value=7.5e-13 Score=146.01 Aligned_cols=237 Identities=12% Similarity=0.090 Sum_probs=160.6
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCc------
Q psy12614 25 EPKVINCIACEPKSSRLAVSRAD-----QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGF------ 92 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~d-----g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~------ 92 (708)
|...+..++|||||++||.+..+ ..|++||+.+++.+...+. . ..+..++|+ ++.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~--~--~~~~~~~wspD~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK--W--VKFSGLAWLGNDALLYSRFAEPKEGQAF 236 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE--E--EESCCCEESTTSEEEEEECCCC------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC--C--ceeccEEEECCCEEEEEEecCccccccc
Confidence 44478899999999999987543 3599999999987653222 1 223578898 667777765543
Q ss_pred --------EEEEECCCCeE--eEEEee--cCCceEEEEEecCCCEEEEEeCCC-----cEEEEEccCC--c-EEEEEecc
Q psy12614 93 --------VNEYDMRRLNI--KSSTAV--TSGTCWCLSVHKKKRLLAAGTEQG-----HINLFQISDE--G-LLYEKLLD 152 (708)
Q Consensus 93 --------i~vwd~~~~~~--~~~~~~--~~~~v~~~~~s~~~~~la~~~~d~-----~i~iwd~~~~--~-~~~~~~~~ 152 (708)
|.+|++.++.. ...+.. +...+..+.|||||++|+..+.++ .|++||+.++ + . ..+.
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~---~~l~ 313 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV---TALI 313 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC---EEEE
T ss_pred ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc---EEec
Confidence 89999987652 222332 333588999999999998877544 8999999887 4 3 2333
Q ss_pred cccccEEEEEECCCCCEEEEecC----C-eEEEEEcCCCc-eEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcE
Q psy12614 153 RQQGRILCTAWHSSGDYLVTGCA----A-AVRVWDIHKGH-AIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFV 226 (708)
Q Consensus 153 ~~~~~v~~~~~s~d~~~l~~~~~----d-~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i 226 (708)
.+...+.... +|+|+.|+..+. + .|.+||+.++. ....+... +...+..+++..+..+++...++..
T Consensus 314 ~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~------~~~~l~~~~~~~~~lv~~~~~dg~~ 386 (741)
T 1yr2_A 314 PDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE------SKDNLESVGIAGNRLFASYIHDAKS 386 (741)
T ss_dssp CSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC------CSSEEEEEEEEBTEEEEEEEETTEE
T ss_pred CCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC------CCCeEEEEEEECCEEEEEEEECCEE
Confidence 4444444443 489998887764 3 59999998752 44444332 1445777888733236777778876
Q ss_pred EEEeCC-CCeeEEEeec-cccCeEEEEEeCCCCEEEEEe----cCCeEEEEEccC
Q psy12614 227 RFWDGK-TGVQWSDVKT-HKKDILALTVSEDENYLYCAG----VDPTVVCFQRTR 275 (708)
Q Consensus 227 ~~wd~~-~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~----~dg~i~iw~~~~ 275 (708)
++|... ++.....+.. +...+..++++|+++.|+... ..+.|++||+.+
T Consensus 387 ~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 387 QVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 666443 4556666654 356788899999987666332 347899999987
No 208
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.50 E-value=2e-10 Score=115.74 Aligned_cols=307 Identities=12% Similarity=0.084 Sum_probs=196.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCC-------CCcE-EEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEe
Q psy12614 37 KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL-------SNSI-ECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTA 108 (708)
Q Consensus 37 ~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~-------~~~v-~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 108 (708)
++..|.+++.++.|..+|..+++.+- ....... ...+ ..+...++.++.++.++.|..+|.++|+.+....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIW-SVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEE-EEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceee-eecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 36678888889999999999998764 2222110 1233 3344448899999999999999999999887776
Q ss_pred ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc---EEEEEECCCCCEEEEecCC-eEEEEEcC
Q psy12614 109 VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR---ILCTAWHSSGDYLVTGCAA-AVRVWDIH 184 (708)
Q Consensus 109 ~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---v~~~~~s~d~~~l~~~~~d-~i~iwd~~ 184 (708)
............ +..+++++.++.|..+|..+++............. ....... +..++.++.+ .+..+|..
T Consensus 131 ~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 131 VAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp CSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETT
T ss_pred CCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECC
Confidence 543322222232 44778888899999999999998754443221100 0111222 3467777777 99999999
Q ss_pred CCceEEEEEecccCCCCCcee---EEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEE
Q psy12614 185 KGHAIHKMSLDKSSKFSKNTA---VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC 261 (708)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 261 (708)
+|+.+................ +.......++.+++++.++.+..+|..+|+.+..... .....+.. ++..++.
T Consensus 207 tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~ 282 (376)
T 3q7m_A 207 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYL 282 (376)
T ss_dssp TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEE
T ss_pred CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEE
Confidence 999988776431000000000 1011111256788888999999999999988766542 23444444 3568888
Q ss_pred EecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe-ccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCcc
Q psy12614 262 AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-IHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCT 340 (708)
Q Consensus 262 ~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~ 340 (708)
++.++.+..+|..+ |+ ..| ... .....+......+..|+.++.+|.+.++|..++.+......
T Consensus 283 ~~~~g~l~~~d~~t--------G~----~~w----~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 283 VDQNDRVMALTIDG--------GV----TLW----TQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp EETTCCEEEEETTT--------CC----EEE----EECTTTTSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EcCCCeEEEEECCC--------Cc----EEE----eecccCCCcccCCEEECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 88999999999998 75 222 222 12223344455588999999999999999988774332211
Q ss_pred -CCCCceEEEEcCCcEEEEEcCCeEEEEE
Q psy12614 341 -LAQSTPVSLAKDIQHVLLQYTSHLELWS 368 (708)
Q Consensus 341 -~~~~~~~~~s~~~~~l~~~~~~~i~i~~ 368 (708)
...........++.+++...++.+..|+
T Consensus 347 ~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 347 DSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred CCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 1122222223466776667888888876
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.50 E-value=4.9e-10 Score=111.47 Aligned_cols=274 Identities=11% Similarity=0.015 Sum_probs=183.2
Q ss_pred EEcCCCCEEEEEeC--CC---cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc----------CCCcEEE
Q psy12614 33 ACEPKSSRLAVSRA--DQ---SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG----------LQGFVNE 95 (708)
Q Consensus 33 ~~s~~~~~la~~~~--dg---~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~----------~d~~i~v 95 (708)
...|+++++.+... .+ .|.++|..+++.+. .+.... .+ .++++ +++|+++. .++.|.+
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~-~i~~g~--~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~v 101 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILG-HVNGGF--LP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEV 101 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEE-EecCCC--CC--CeEECCCCCEEEEEeccccccccCCCCCeEEE
Confidence 45588888777653 22 78999999998776 555443 44 89999 88888875 3678999
Q ss_pred EECCCCeEeEEEeec-------CCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEe-cccccccEEEEEECC
Q psy12614 96 YDMRRLNIKSSTAVT-------SGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKL-LDRQQGRILCTAWHS 165 (708)
Q Consensus 96 wd~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~s~ 165 (708)
||..+++.+..+... ......++|+|||++|+++.. ++.|.++| .+++.. .. +.. .+ ++.+.|
T Consensus 102 iD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~--~~~i~~-~~---~~~~~~ 174 (373)
T 2mad_H 102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSD--DQLLSS-PT---CYHIHP 174 (373)
T ss_pred EECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEE--eEEcCC-Cc---eEEEEe
Confidence 999998887776532 133568999999999998874 57899999 998876 33 321 22 244556
Q ss_pred CC-CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCe--eEEEe
Q psy12614 166 SG-DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGV--QWSDV 240 (708)
Q Consensus 166 d~-~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~--~~~~~ 240 (708)
++ ..+++.+.| .+.++|. +++...........- ..........+.+++ .++..+..+.+.+.|+.++. .+..+
T Consensus 175 ~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~ 252 (373)
T 2mad_H 175 GAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLT-AAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPI 252 (373)
T ss_pred CCCceEEEEcCCCCEEEEEC-CCcEEEEEecccccc-CCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeee
Confidence 65 345566667 9999999 887764432100000 001122334566665 45555577899999987553 22222
Q ss_pred ec----------cccCeEEEEEeCCCCEEEEEec----------CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec
Q psy12614 241 KT----------HKKDILALTVSEDENYLYCAGV----------DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI 300 (708)
Q Consensus 241 ~~----------~~~~i~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 300 (708)
.. .......++++|++++++++.. .+.|.++|..+ ++ ....+.
T Consensus 253 ~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t--------~~--------vv~~i~- 315 (373)
T 2mad_H 253 DALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV--------GQ--------TSSQIS- 315 (373)
T ss_pred eecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCC--------CE--------EEEEEE-
Confidence 21 1223445789999998888653 35799999988 54 334443
Q ss_pred cccceEEEEEe--CC-EEEEEc-CCCeEEEEeCCCCceeec
Q psy12614 301 HEGDVKSLALH--GN-RLYSGG-LDSYLSLSYYPPKTLVKY 337 (708)
Q Consensus 301 ~~~~v~~l~~~--~~-~l~s~~-~d~~i~iw~~~~~~~~~~ 337 (708)
-.....+++++ ++ .++++. .++.|.++|..+.+....
T Consensus 316 ~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 316 LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 23457889999 66 677776 589999999998774443
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.49 E-value=9.5e-11 Score=113.46 Aligned_cols=230 Identities=11% Similarity=0.025 Sum_probs=157.7
Q ss_pred eccCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEE
Q psy12614 21 FYAPEPKVINCIACEPKSS-RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYD 97 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~-~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd 97 (708)
++..+..---+.+|+|++. ++++...++.|..||..++... .+. .. ..+.+++++ ++ |+.+. ++.|.+||
T Consensus 7 ~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~--~~~-~~--~~~~~i~~~~dG~-l~v~~-~~~l~~~d 79 (297)
T 3g4e_A 7 VLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ--RVT-MD--APVSSVALRQSGG-YVATI-GTKFCALN 79 (297)
T ss_dssp EECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE--EEE-CS--SCEEEEEEBTTSS-EEEEE-TTEEEEEE
T ss_pred EeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE--EEe-CC--CceEEEEECCCCC-EEEEE-CCeEEEEE
Confidence 3444555667899999654 5556667889999999987753 232 33 679999999 66 44444 57899999
Q ss_pred CCCCeEeEEEee----cCCceEEEEEecCCCEEEEEeCC---------CcEEEEEccC-CcEEEEEecccccccEEEEEE
Q psy12614 98 MRRLNIKSSTAV----TSGTCWCLSVHKKKRLLAAGTEQ---------GHINLFQISD-EGLLYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 98 ~~~~~~~~~~~~----~~~~v~~~~~s~~~~~la~~~~d---------~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~ 163 (708)
.++++....... ....+..++++|+|+++++.... ..-.+|.+.. ++.. .+.........++|
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~---~~~~~~~~pngi~~ 156 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK---KYFDQVDISNGLDW 156 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE---EEEEEESBEEEEEE
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE---EEeeccccccceEE
Confidence 998875443332 12458899999999976654321 2345565543 3332 22223345688999
Q ss_pred CCCCCEEEEec-CC-eEEEEEc--CCCceEE--EEEecccCCCCCceeEEEEEEccCCEEE-EEcCCCcEEEEeCCCCee
Q psy12614 164 HSSGDYLVTGC-AA-AVRVWDI--HKGHAIH--KMSLDKSSKFSKNTAVWCVAFCADFTII-TGDSGGFVRFWDGKTGVQ 236 (708)
Q Consensus 164 s~d~~~l~~~~-~d-~i~iwd~--~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~ 236 (708)
+||++.|+.+. .+ .|.+|++ .+|.... .+.... .....+..+++.++|++. +....+.|..||..+++.
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~----~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~ 232 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE----KEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKR 232 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC----GGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCE
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC----CCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceE
Confidence 99999776554 44 8999987 5665421 111110 113567899999999844 445567899999988999
Q ss_pred EEEeeccccCeEEEEEe-CCCCEEEEEec
Q psy12614 237 WSDVKTHKKDILALTVS-EDENYLYCAGV 264 (708)
Q Consensus 237 ~~~~~~~~~~i~~~~~s-~~~~~l~~~~~ 264 (708)
+..+..+...+++++|. |+++.|++++.
T Consensus 233 ~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 233 LQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 98888777889999998 88888877664
No 211
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.46 E-value=2.8e-11 Score=120.67 Aligned_cols=275 Identities=11% Similarity=-0.031 Sum_probs=182.3
Q ss_pred CCEEEEEcC-C----CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEe----------CCCcEEEEEccCCcE
Q psy12614 81 NDRLFSGGL-Q----GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT----------EQGHINLFQISDEGL 145 (708)
Q Consensus 81 ~~~l~s~~~-d----~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----------~d~~i~iwd~~~~~~ 145 (708)
++++++... + +.|.+.|..+++.+..+..-..+ .++++|||++|+++. .++.|.++|..+++.
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 555655544 2 69999999999999998865555 899999999988875 367899999999988
Q ss_pred EEEEecccc-----cccEEEEEECCCCCEEEEecC--C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--
Q psy12614 146 LYEKLLDRQ-----QGRILCTAWHSSGDYLVTGCA--A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-- 215 (708)
Q Consensus 146 ~~~~~~~~~-----~~~v~~~~~s~d~~~l~~~~~--d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-- 215 (708)
+....+.+. ......+.|+|||++|+++.. + .|.+.|+.+++.+.++..+ .. ....|++
T Consensus 162 v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~-------g~----~~~~p~g~~ 230 (426)
T 3c75_H 162 IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP-------DC----YHIFPASPT 230 (426)
T ss_dssp EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-------SE----EEEEEEETT
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC-------Cc----eeeccCCCc
Confidence 743333200 123457899999999998763 4 8999999999999988764 11 2334444
Q ss_pred EEEEEcCCCcEEEEeCCCCeeEEE----eeccccCe-EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCc
Q psy12614 216 TIITGDSGGFVRFWDGKTGVQWSD----VKTHKKDI-LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSS 290 (708)
Q Consensus 216 ~l~~~~~dg~i~~wd~~~~~~~~~----~~~~~~~i-~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~ 290 (708)
.+++.+.||.+.+.+..+++.... +.....++ ..+.|.+++..++.....+.+.+.|... +.
T Consensus 231 ~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~--------~~----- 297 (426)
T 3c75_H 231 VFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTA--------EG----- 297 (426)
T ss_dssp EEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECS--------SC-----
T ss_pred EEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccC--------Cc-----
Confidence 366777788888888866655432 11111111 2356788888887777888888888865 32
Q ss_pred ceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEc----------
Q psy12614 291 VWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQY---------- 360 (708)
Q Consensus 291 ~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~---------- 360 (708)
.... .-|.+.................++++|+++.+.+..
T Consensus 298 ----~~v~--------------------------~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~ 347 (426)
T 3c75_H 298 ----ATFR--------------------------APIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKA 347 (426)
T ss_dssp ----EEEC--------------------------CCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTS
T ss_pred ----eEEe--------------------------eeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccC
Confidence 0000 001111000000000011223478899988766642
Q ss_pred -CCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc-EEEEEc--CCceEEEEEEe
Q psy12614 361 -TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK-YVAYST--ESCVRLHSLDL 433 (708)
Q Consensus 361 -~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~--d~~i~i~~~~~ 433 (708)
++.|.++|..+.+ .+.++..+ .....++|+|||+ ++++.. ++.|.++|+.+
T Consensus 348 ~s~~VsVID~~T~k--------------------vv~~I~vg--~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 348 ASRFVVVLNAETGE--------------------RINKIELG--HEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp CEEEEEEEETTTCC--------------------EEEEEEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred CCCEEEEEECCCCe--------------------EEEEEECC--CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 3479999998866 44444332 2578899999999 777744 89999999886
No 212
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.46 E-value=1.6e-11 Score=135.35 Aligned_cols=275 Identities=9% Similarity=-0.044 Sum_probs=173.7
Q ss_pred cCCCCEEEEEeCCCc---EEEEeCC-----CCCeEEEEEe------cCCCCCcEEEEEEe--CCEEEEEcCC-----CcE
Q psy12614 35 EPKSSRLAVSRADQS---IEIWDIS-----ETPHVDRVFI------GDPLSNSIECLTWF--NDRLFSGGLQ-----GFV 93 (708)
Q Consensus 35 s~~~~~la~~~~dg~---v~iwd~~-----~~~~~~~~~~------~h~~~~~v~~l~~~--~~~l~s~~~d-----~~i 93 (708)
+|+|++++....++. -.||-.. .+.. ...+. +|. ..+..++|| |++|+.+..+ .+|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~lld~~~l~~~~~--~~~~~~~~SPDG~~la~~~~~~G~e~~~i 191 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKG-RVLLDPNTWAKDGA--TALDAWAASDDGRLLAYSVQDGGSDWRTV 191 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCC-EEEECGGGCC------EEEEEEEECTTSSEEEEEEEETTCSEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCC-EEEECHHHhccCCC--EEEEeEEECCCCCEEEEEEcCCCCceEEE
Confidence 489999987754433 5555543 3332 22322 222 368899999 8888876543 469
Q ss_pred EEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCc--------------EEEEEccCCcE--EEEEeccccccc
Q psy12614 94 NEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGH--------------INLFQISDEGL--LYEKLLDRQQGR 157 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~--------------i~iwd~~~~~~--~~~~~~~~~~~~ 157 (708)
++||+.+++.+.. ..+...+..++|+|| +.|+.++.++. |++|++.++.. ........+...
T Consensus 192 ~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~ 269 (741)
T 1yr2_A 192 KFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKR 269 (741)
T ss_dssp EEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTC
T ss_pred EEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeE
Confidence 9999999987653 222223457899999 99988876554 89999987652 111223334446
Q ss_pred EEEEEECCCCCEEEEecC-----C-eEEEEEcCCC--ceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcC----CC
Q psy12614 158 ILCTAWHSSGDYLVTGCA-----A-AVRVWDIHKG--HAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDS----GG 224 (708)
Q Consensus 158 v~~~~~s~d~~~l~~~~~-----d-~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~----dg 224 (708)
+..+.|||||++|+..+. . .|.+||+.++ +....+... ........ +|+| .++..+. ++
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-------~~~~~~~~-~~dg~~l~~~s~~~~~~~ 341 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD-------LKAQWDFV-DGVGDQLWFVSGDGAPLK 341 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS-------SSSCEEEE-EEETTEEEEEECTTCTTC
T ss_pred EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC-------CCceEEEE-eccCCEEEEEECCCCCCC
Confidence 889999999999887652 4 7999999887 314444433 22233333 3777 4655544 35
Q ss_pred cEEEEeCCCC--eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec-c
Q psy12614 225 FVRFWDGKTG--VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI-H 301 (708)
Q Consensus 225 ~i~~wd~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~ 301 (708)
.|.+||+.++ .....+..+...+..++++ ++.++++...|+..++|.+.. .|+ ....+.. +
T Consensus 342 ~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~-------~g~--------~~~~l~~~~ 405 (741)
T 1yr2_A 342 KIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDL-------DGK--------PAGAVSLPG 405 (741)
T ss_dssp EEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEET-------TSC--------EEEECBCSS
T ss_pred EEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC-------CCC--------ceeeccCCC
Confidence 6999999874 3344445455556677887 566778888898877776652 022 2333443 3
Q ss_pred ccceEEEEEe--CCEEE-EE---cCCCeEEEEeCCCCceeecC
Q psy12614 302 EGDVKSLALH--GNRLY-SG---GLDSYLSLSYYPPKTLVKYP 338 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~-s~---~~d~~i~iw~~~~~~~~~~~ 338 (708)
.+.+..++++ ++.++ +. ...+.+.+||+.++....+.
T Consensus 406 ~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~ 448 (741)
T 1yr2_A 406 IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWE 448 (741)
T ss_dssp SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECS
T ss_pred CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 5667778776 44444 32 23578999999877644443
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.46 E-value=3.6e-11 Score=121.59 Aligned_cols=239 Identities=13% Similarity=0.066 Sum_probs=162.0
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCC--cEEEEECCCCe
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQG--FVNEYDMRRLN 102 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~--~i~vwd~~~~~ 102 (708)
.....++|+|+++++++...++.|++||..++.... ..... .... ++|+ ++.|+++..++ .|.+|+..++.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~-~~~~~---~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTT-VHPGF---KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEE-EEETC---CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEE-eeccC---CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 468899999999987877778899999999877654 44442 2333 8888 78888888766 79999987765
Q ss_pred EeEEE----eecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe--cccccccE-E-EEEECCCCCEE-EEe
Q psy12614 103 IKSST----AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL--LDRQQGRI-L-CTAWHSSGDYL-VTG 173 (708)
Q Consensus 103 ~~~~~----~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~v-~-~~~~s~d~~~l-~~~ 173 (708)
....+ ......+.+++++|++..|.++..++.|+.||..++....... ..+....- . .++|+|++..| ++-
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 44444 2245678899999965556667778899999998876542111 22222222 3 89999964445 444
Q ss_pred cCC-eEEEEEcCCCceEEEEEecc-c-CC------CCCceeEEEEEEccCCEE-EEEc-CCCcEEEEeCCCCeeEEEeec
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDK-S-SK------FSKNTAVWCVAFCADFTI-ITGD-SGGFVRFWDGKTGVQWSDVKT 242 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~-~-~~------~~~~~~v~~~~~~~~~~l-~~~~-~dg~i~~wd~~~~~~~~~~~~ 242 (708)
..+ .|+.|+... . +..+.... . +. ...-.....++++++|++ ++-. .++.|+.|++.+++. .++.+
T Consensus 286 ~~~~~I~~~~~~g-~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g 362 (409)
T 3hrp_A 286 QNLSSVYKITPDG-E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAG 362 (409)
T ss_dssp TTTTEEEEECTTC-C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEE
T ss_pred CCCCEEEEEecCC-C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeC
Confidence 555 999999754 3 22222110 0 00 000234789999999974 4555 678999999877764 33333
Q ss_pred c---------------ccCeEEEEEeCCCCEEEEEecCCeEEEEEc
Q psy12614 243 H---------------KKDILALTVSEDENYLYCAGVDPTVVCFQR 273 (708)
Q Consensus 243 ~---------------~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~ 273 (708)
+ -.....++++++++++++-..++.|+.+++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 3 245789999999877777777788888765
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.45 E-value=1.4e-10 Score=113.87 Aligned_cols=228 Identities=10% Similarity=-0.036 Sum_probs=151.9
Q ss_pred ccCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECC
Q psy12614 22 YAPEPKVINCIACEPKSS-RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMR 99 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~-~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~ 99 (708)
+........+.+|+|++. ++++...++.|.+||..+++.. .+. .. ..+.+++|+ ...++.++.+ .|.+||..
T Consensus 44 ~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~--~~~-~~--~~v~~i~~~~dg~l~v~~~~-gl~~~d~~ 117 (326)
T 2ghs_A 44 DETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKT--VHA-LP--FMGSALAKISDSKQLIASDD-GLFLRDTA 117 (326)
T ss_dssp ECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE--EEE-CS--SCEEEEEEEETTEEEEEETT-EEEEEETT
T ss_pred eccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE--EEE-CC--CcceEEEEeCCCeEEEEECC-CEEEEECC
Confidence 333334567889999855 4556666789999999887653 232 34 679999999 4444444444 49999998
Q ss_pred CCeEeEEEee----cCCceEEEEEecCCCEEEEEeC------CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCE
Q psy12614 100 RLNIKSSTAV----TSGTCWCLSVHKKKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDY 169 (708)
Q Consensus 100 ~~~~~~~~~~----~~~~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~ 169 (708)
+++....... ....+..++++|+|+++++... .+.|..++ +++.. .+.........++|+||++.
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~---~~~~~~~~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT---KLFADISIPNSICFSPDGTT 192 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE---EEEEEESSEEEEEECTTSCE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE---EeeCCCcccCCeEEcCCCCE
Confidence 8875433221 1236889999999997665432 24455555 55543 22223345678999999997
Q ss_pred EEEec-CC-eEEEEEcC--CC-ceE--EEEEecccCCCCCceeEEEEEEccCCEEEEE-cCCCcEEEEeCCCCeeEEEee
Q psy12614 170 LVTGC-AA-AVRVWDIH--KG-HAI--HKMSLDKSSKFSKNTAVWCVAFCADFTIITG-DSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 170 l~~~~-~d-~i~iwd~~--~~-~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~ 241 (708)
|+.+. .+ .|.+|++. ++ ... ..+.... .....+..+++.++|.+.++ ..++.|..||. +++.+..+.
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~----~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~ 267 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDST----GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYE 267 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECT----TSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEE
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEECC----CCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEE
Confidence 76554 45 89999986 56 321 1221110 11355678999999975444 45678999998 677777777
Q ss_pred ccccCeEEEEEe-CCCCEEEEEecC
Q psy12614 242 THKKDILALTVS-EDENYLYCAGVD 265 (708)
Q Consensus 242 ~~~~~i~~~~~s-~~~~~l~~~~~d 265 (708)
.+...+.+++|+ ++++.|++++..
T Consensus 268 ~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 268 VPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp CSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCCCCcEEEEEecCCCCEEEEEecC
Confidence 676789999998 888877666544
No 215
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.44 E-value=6.2e-10 Score=112.08 Aligned_cols=300 Identities=13% Similarity=0.119 Sum_probs=188.5
Q ss_pred eCCEEEEEcCCCcEEEEECCCCeEeEEEeecC---------CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe
Q psy12614 80 FNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTS---------GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL 150 (708)
Q Consensus 80 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~---------~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~ 150 (708)
.++.+++++.++.|..+|.++|+.+....... ..+.+. ...++..+++++.++.|..+|..+++......
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 48889999999999999999999887766421 223222 22245678888899999999999999876554
Q ss_pred cccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEE
Q psy12614 151 LDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFW 229 (708)
Q Consensus 151 ~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~w 229 (708)
+..... ...... +..++.++.+ .|..+|..+|+.+.......... . ......... .++.++++..++.|..+
T Consensus 131 ~~~~~~--~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~-~-~~~~~~~~~-~~~~v~~g~~~g~l~~~ 203 (376)
T 3q7m_A 131 VAGEAL--SRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL-S-LRGESAPTT-AFGAAVVGGDNGRVSAV 203 (376)
T ss_dssp CSSCCC--SCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-------CCCCCCEE-ETTEEEECCTTTEEEEE
T ss_pred CCCceE--cCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce-e-ecCCCCcEE-ECCEEEEEcCCCEEEEE
Confidence 432211 111121 4467777777 99999999999988876531000 0 000011112 26678888889999999
Q ss_pred eCCCCeeEEEeeccccC----------e-EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE
Q psy12614 230 DGKTGVQWSDVKTHKKD----------I-LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR 298 (708)
Q Consensus 230 d~~~~~~~~~~~~~~~~----------i-~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~ 298 (708)
|..+|+.+......... + ..... .+..++.++.++.+..+|..+ |+ ..|. .
T Consensus 204 d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~t--------G~----~~w~----~ 265 (376)
T 3q7m_A 204 LMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRS--------GQ----IMWK----R 265 (376)
T ss_dssp ETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTT--------CC----EEEE----E
T ss_pred ECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCC--------Cc----EEee----c
Confidence 99999887665432110 1 11111 245788888899999999988 65 2222 1
Q ss_pred eccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccC--CCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCC
Q psy12614 299 VIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTL--AQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTD 376 (708)
Q Consensus 299 ~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~--~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~ 376 (708)
.......+...++.++.++.++.+..+|..++......... .......+ .++.+++...++.+..+|..+++
T Consensus 266 --~~~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~-~~~~l~v~~~~g~l~~~d~~tG~--- 339 (376)
T 3q7m_A 266 --ELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL-YNGNLVVGDSEGYLHWINVEDGR--- 339 (376)
T ss_dssp --CCCCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE-ETTEEEEECTTSEEEEEETTTCC---
T ss_pred --cCCCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE-ECCEEEEEeCCCeEEEEECCCCc---
Confidence 12334556666888999999999999999887743322111 11222222 34555556678899999998877
Q ss_pred CCCCCCCCcccCCCCceEEEEEEecCCCceEE-EEeCCCCcEEEEEcCCceEEEE
Q psy12614 377 LSSHSNTTGVPLLSFPRLIVKMSAVNNATIRC-SVVSNDGKYVAYSTESCVRLHS 430 (708)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~g~~l~~~~d~~i~i~~ 430 (708)
.+....... ..+.+ ... .++.+++.+.+|.+..|+
T Consensus 340 -----------------~~~~~~~~~-~~~~~~~~~-~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 340 -----------------FVAQQKVDS-SGFQTEPVA-ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp -----------------EEEEEECCT-TCBCSCCEE-ETTEEEEEBTTSCEEEEE
T ss_pred -----------------EEEEEecCC-CcceeCCEE-ECCEEEEEeCCCEEEEEe
Confidence 344443212 22221 222 255544445688888876
No 216
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.44 E-value=5.9e-12 Score=123.63 Aligned_cols=178 Identities=7% Similarity=0.062 Sum_probs=136.7
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC---------eEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEE
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETP---------HVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYD 97 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~---------~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd 97 (708)
..++.+++++...++++|+.+ .+++|++.... ........+. . |+.|+|.++.|+++ .++.|++||
T Consensus 38 ~~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp--~-V~~l~fd~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIP--D-VIFVCFHGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECT--T-EEEEEEETTEEEEE-ESSEEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCC--C-eeEEEECCCEEEEE-cCCcEEEEE
Confidence 369999999999999999988 56679876432 1111233455 6 99999988889888 889999999
Q ss_pred CCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 98 MRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
+.+.........|...+.++.+.+.. +|+++.||.|.+||+.++... . +...|.+++|||+| ++.+..|
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~--~----~~~~Vs~v~WSpkG--~~vg~~dg 182 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTK--Q----LAQNVTSFDVTNSQ--LAVLLKDR 182 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEE--E----EEESEEEEEECSSE--EEEEETTS
T ss_pred chhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCccc--c----ccCCceEEEEcCCc--eEEEEcCC
Confidence 98877666777888889888877653 888999999999999988764 2 34689999999999 6778888
Q ss_pred eEEEEEcCCCce--EEEEEecc--cCCCCCceeEEEEEEccCCEEEE
Q psy12614 177 AVRVWDIHKGHA--IHKMSLDK--SSKFSKNTAVWCVAFCADFTIIT 219 (708)
Q Consensus 177 ~i~iwd~~~~~~--~~~~~~~~--~~~~~~~~~v~~~~~~~~~~l~~ 219 (708)
.+++|+...++. ...+..+. ..+..+...|.++.|.+++++++
T Consensus 183 ~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 183 SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp CEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred cEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence 999999887775 55553221 00002378899999999997443
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.43 E-value=4.6e-11 Score=116.26 Aligned_cols=230 Identities=9% Similarity=-0.021 Sum_probs=156.9
Q ss_pred eeccCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 20 KFYAPEPKVINCIACEPKSS-RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~-~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
+.+..........+|+|+|+ +++++..++.|..|+. ++.. . .+..+. ..+..++++ |+.+++...++.|.+|
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~-~~~~~~--~~~~gl~~d~dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-D-VLLDAT--AFTNGNAVDAQQRLVHCEHGRRAITRS 112 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-E-EEEESC--SCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-E-EEeCCC--CccceeeECCCCCEEEEECCCCEEEEE
Confidence 33444556678899999998 5666777889999998 4543 2 455555 779999999 6655555566889999
Q ss_pred ECCCCeEeEEEeec----CCceEEEEEecCCCEEEE----EeC-------------CCcEEEEEccCCcEEEEEeccccc
Q psy12614 97 DMRRLNIKSSTAVT----SGTCWCLSVHKKKRLLAA----GTE-------------QGHINLFQISDEGLLYEKLLDRQQ 155 (708)
Q Consensus 97 d~~~~~~~~~~~~~----~~~v~~~~~s~~~~~la~----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~ 155 (708)
+.+ ++........ ...+..++++|+|++.++ |.. .+.|..||..+++... .. ..
T Consensus 113 ~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~--~~--~~ 187 (305)
T 3dr2_A 113 DAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR--MA--DL 187 (305)
T ss_dssp CTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE--EE--EE
T ss_pred CCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE--Ee--cC
Confidence 986 5533222211 234678999999998876 321 2567778876777642 11 33
Q ss_pred ccEEEEEECCCCCEEEEecC------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEE
Q psy12614 156 GRILCTAWHSSGDYLVTGCA------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRF 228 (708)
Q Consensus 156 ~~v~~~~~s~d~~~l~~~~~------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~ 228 (708)
.....++|+||++.|+.+.. . .|.+|++..+. +........ ........+++.++|++.+++.+ .|.+
T Consensus 188 ~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~---~~~~~pdgi~~d~~G~lwv~~~~-gv~~ 262 (305)
T 3dr2_A 188 DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFAS---VPDGLPDGFCVDRGGWLWSSSGT-GVCV 262 (305)
T ss_dssp SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEEC---CSSSCCCSEEECTTSCEEECCSS-EEEE
T ss_pred CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEE---CCCCCCCeEEECCCCCEEEecCC-cEEE
Confidence 45678999999997776543 3 79999987654 221111100 01233456889999987777655 4999
Q ss_pred EeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCC
Q psy12614 229 WDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDP 266 (708)
Q Consensus 229 wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 266 (708)
|+. +++.+..+..+. .+.+++|+++++.|+.++.++
T Consensus 263 ~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 263 FDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp ECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred ECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence 997 577777776554 588999999999998888754
No 218
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.42 E-value=3.4e-10 Score=110.85 Aligned_cols=232 Identities=12% Similarity=0.062 Sum_probs=158.9
Q ss_pred CcEEEEEEe--CCEEEE-------EcCCCcEEEEECCCCeEeEEEe----ecCCceEEEEEecC-CCEEEEEeCCCcEEE
Q psy12614 72 NSIECLTWF--NDRLFS-------GGLQGFVNEYDMRRLNIKSSTA----VTSGTCWCLSVHKK-KRLLAAGTEQGHINL 137 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s-------~~~d~~i~vwd~~~~~~~~~~~----~~~~~v~~~~~s~~-~~~la~~~~d~~i~i 137 (708)
....+++|+ +..+++ ...++.|.+||..+++...... ++...+.+++++++ ++++++ +..+.|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-ETTTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE-ECCCCEEE
Confidence 567899998 655556 4678999999988877543222 14467899999999 665554 44457999
Q ss_pred EEccCCcEEEEEe-cc---c-ccccEEEEEECCCCCEEEEecCC----------------eEEEEEcCCCceEEEEEecc
Q psy12614 138 FQISDEGLLYEKL-LD---R-QQGRILCTAWHSSGDYLVTGCAA----------------AVRVWDIHKGHAIHKMSLDK 196 (708)
Q Consensus 138 wd~~~~~~~~~~~-~~---~-~~~~v~~~~~s~d~~~l~~~~~d----------------~i~iwd~~~~~~~~~~~~~~ 196 (708)
||.+ ++.. .. .. . ....+.+++++++|+.+++...+ .|..||.. ++...... .
T Consensus 97 ~d~~-g~~~--~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-~- 170 (314)
T 1pjx_A 97 VQTD-GTFE--EIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-A- 170 (314)
T ss_dssp EETT-SCEE--ECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-E-
T ss_pred EeCC-CCEE--EEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-C-
Confidence 9998 7664 22 11 1 12457899999999887776542 56666655 54433222 1
Q ss_pred cCCCCCceeEEEEEEc----cCCE-EE-EEcCCCcEEEEeCC-CCee-----EEEeeccc-cCeEEEEEeCCCCEEEEEe
Q psy12614 197 SSKFSKNTAVWCVAFC----ADFT-II-TGDSGGFVRFWDGK-TGVQ-----WSDVKTHK-KDILALTVSEDENYLYCAG 263 (708)
Q Consensus 197 ~~~~~~~~~v~~~~~~----~~~~-l~-~~~~dg~i~~wd~~-~~~~-----~~~~~~~~-~~i~~~~~s~~~~~l~~~~ 263 (708)
......++++ |+++ ++ +...++.|.+||.. +++. ...+..+. ..+..++++++|+++++..
T Consensus 171 ------~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 171 ------FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp ------ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred ------CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc
Confidence 3346788999 9994 44 44567899999976 4542 22333333 5678899999998888877
Q ss_pred cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC-EEEEEcCCCeEEEEeCCCC
Q psy12614 264 VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN-RLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 264 ~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~-~l~s~~~d~~i~iw~~~~~ 332 (708)
.++.|.+|+..+ ++ ....+..+...+.+++++ ++ ++++...++.|..|++...
T Consensus 245 ~~~~i~~~d~~~--------g~--------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 245 GSSHIEVFGPDG--------GQ--------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TTTEEEEECTTC--------BS--------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCEEEEEcCCC--------Cc--------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 788999999885 43 223344555778999997 66 4455566789999988653
No 219
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.42 E-value=2.5e-10 Score=115.32 Aligned_cols=233 Identities=10% Similarity=-0.024 Sum_probs=159.7
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC---eEEEEEcCCCce
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA---AVRVWDIHKGHA 188 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d---~i~iwd~~~~~~ 188 (708)
.....|+|+++++++++...++.|++||..++.+.. .... ..... ++|+|+++.|+++..+ .|.+++...+..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~--~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTT--VHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEE--EEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEE--eecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 467899999999977777777999999999887752 2222 22233 9999999988887763 688898877665
Q ss_pred EEEEEecccCCCCCceeEEEEEEcc-CCEEEEEcCCCcEEEEeCCCCeeEEE----eeccccCe-E-EEEEeCC-CCEEE
Q psy12614 189 IHKMSLDKSSKFSKNTAVWCVAFCA-DFTIITGDSGGFVRFWDGKTGVQWSD----VKTHKKDI-L-ALTVSED-ENYLY 260 (708)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~----~~~~~~~i-~-~~~~s~~-~~~l~ 260 (708)
...+..... .....+.+++++| ++.++++..++.|+.||..++..... ..++...- . .++|+|+ +.+++
T Consensus 207 ~~~~g~~~~---~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 207 PTRIGQLGS---TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp EEEEEECCT---TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred eEEeeeccc---hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 444411110 0145578899999 67877788889999999987754322 22222222 2 8999996 54445
Q ss_pred EEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc---------------ccceEEEEEe--CCEEEEEc-CCC
Q psy12614 261 CAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH---------------EGDVKSLALH--GNRLYSGG-LDS 322 (708)
Q Consensus 261 ~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------------~~~v~~l~~~--~~~l~s~~-~d~ 322 (708)
+-..++.|+.|+... . ...+.++ -.....++++ ++++++-. .++
T Consensus 284 ~d~~~~~I~~~~~~g--------~----------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~ 345 (409)
T 3hrp_A 284 SDQNLSSVYKITPDG--------E----------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGY 345 (409)
T ss_dssp EETTTTEEEEECTTC--------C----------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTC
T ss_pred EeCCCCEEEEEecCC--------C----------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCC
Confidence 555678899998765 1 1222222 1347788998 77777777 889
Q ss_pred eEEEEeCCCCceeecCcc---------------CCCCceEEEEcCCcEEEEE-cCCeEEEEEe
Q psy12614 323 YLSLSYYPPKTLVKYPCT---------------LAQSTPVSLAKDIQHVLLQ-YTSHLELWSL 369 (708)
Q Consensus 323 ~i~iw~~~~~~~~~~~~~---------------~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~ 369 (708)
.|+.|++.++.+..+.+. +..+..++++++|.++++. .++.|+.+++
T Consensus 346 ~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 346 CLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 999999777665544322 3456779999998888775 6677877665
No 220
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.41 E-value=1.1e-09 Score=105.82 Aligned_cols=213 Identities=11% Similarity=0.097 Sum_probs=147.8
Q ss_pred CcEEEEEEe---CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE
Q psy12614 72 NSIECLTWF---NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE 148 (708)
Q Consensus 72 ~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~ 148 (708)
.-..+..|+ +..+++...++.|..||..+++.. .+ .....+.+++++++|+++++ . ++.|.+||.++++....
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEE
Confidence 567788998 445566667899999999987652 22 34578999999999995554 4 56799999998876532
Q ss_pred Eeccc--ccccEEEEEECCCCCEEEEecC---------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE
Q psy12614 149 KLLDR--QQGRILCTAWHSSGDYLVTGCA---------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT 216 (708)
Q Consensus 149 ~~~~~--~~~~v~~~~~s~d~~~l~~~~~---------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 216 (708)
..... ....+..++++|+|+++++... . .-.+|.+........+... ......++|+||++
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~-------~~~pngi~~spdg~ 161 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ-------VDISNGLDWSLDHK 161 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE-------ESBEEEEEECTTSC
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec-------cccccceEEcCCCC
Confidence 22221 2346889999999997765422 1 3455555432222222221 34567899999995
Q ss_pred -E-EEEcCCCcEEEEeC--CCCee-----EEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCC
Q psy12614 217 -I-ITGDSGGFVRFWDG--KTGVQ-----WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQ 287 (708)
Q Consensus 217 -l-~~~~~dg~i~~wd~--~~~~~-----~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~ 287 (708)
+ ++.+.++.|.+|++ .++.. ...+..+......++++++|++.++....+.|..||..+ |+
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t--------G~-- 231 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT--------GK-- 231 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTT--------CC--
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC--------ce--
Confidence 4 55666789999986 45543 222333446678999999998777777778899999987 65
Q ss_pred CCcceEEeEEEeccccceEEEEEe
Q psy12614 288 GSSVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 288 ~~~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
....+..+...+++++|.
T Consensus 232 ------~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 232 ------RLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp ------EEEEEECSSSBEEEEEEE
T ss_pred ------EEEEEECCCCCceEEEEe
Confidence 556666666789999997
No 221
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.38 E-value=1.1e-09 Score=118.51 Aligned_cols=302 Identities=11% Similarity=0.139 Sum_probs=194.3
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCC---------c-EEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEE
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN---------S-IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~---------~-v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
+..|.+++.++.|.-+|..+|+.+= .+.... .. . -..+++.+..+++++.|+.|..+|..+|+.+..+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W-~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIW-KYDPQS-DRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEE-EECCCC-CGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeE-EEcCCC-CccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 5678888888999999999999865 333222 00 0 1223455889999999999999999999998877
Q ss_pred eec--CCceEEEEEec---CCCEEEEEe------CCCcEEEEEccCCcEEEEEecccc----------------------
Q psy12614 108 AVT--SGTCWCLSVHK---KKRLLAAGT------EQGHINLFQISDEGLLYEKLLDRQ---------------------- 154 (708)
Q Consensus 108 ~~~--~~~v~~~~~s~---~~~~la~~~------~d~~i~iwd~~~~~~~~~~~~~~~---------------------- 154 (708)
... ......+..+| ++ .+++++ .++.|+.||..+|+.+........
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 226 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA 226 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred cCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence 642 11111111122 44 444443 368999999999998754432110
Q ss_pred -------cccEEEEEECCCCCEEEEecCC-e-------------------EEEEEcCCCceEEEEEecccCC--CCCcee
Q psy12614 155 -------QGRILCTAWHSSGDYLVTGCAA-A-------------------VRVWDIHKGHAIHKMSLDKSSK--FSKNTA 205 (708)
Q Consensus 155 -------~~~v~~~~~s~d~~~l~~~~~d-~-------------------i~iwd~~~~~~~~~~~~~~~~~--~~~~~~ 205 (708)
......++++|++..++.+..+ . |..||..+|+.+..+....... +.....
T Consensus 227 w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 306 (689)
T 1yiq_A 227 YVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQH 306 (689)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCC
Confidence 0111257888988899888776 4 9999999999998887542100 001112
Q ss_pred EEEEEEccCCE----EEEEcCCCcEEEEeCCCCeeEEEeeccc-------------------------------------
Q psy12614 206 VWCVAFCADFT----IITGDSGGFVRFWDGKTGVQWSDVKTHK------------------------------------- 244 (708)
Q Consensus 206 v~~~~~~~~~~----l~~~~~dg~i~~wd~~~~~~~~~~~~~~------------------------------------- 244 (708)
+.......+|+ ++.++.+|.++++|.++|+.+.......
T Consensus 307 ~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~ 386 (689)
T 1yiq_A 307 MILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFW 386 (689)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTT
T ss_pred cEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcc
Confidence 22222223553 7788899999999999999874432110
Q ss_pred --cCeEEEEEeCCCCEEEEEec---------------------------------------------CCeEEEEEccCCc
Q psy12614 245 --KDILALTVSEDENYLYCAGV---------------------------------------------DPTVVCFQRTRKP 277 (708)
Q Consensus 245 --~~i~~~~~s~~~~~l~~~~~---------------------------------------------dg~i~iw~~~~~~ 277 (708)
..-..++|+|+..++++... +|.|..||+.+
T Consensus 387 Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t-- 464 (689)
T 1yiq_A 387 GAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK-- 464 (689)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT--
T ss_pred cccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC--
Confidence 00123789999888887633 36788899988
Q ss_pred ccccCCCCCCCCcceEEeEEEeccccceE-EEEEeCCEEEEEcCCCeEEEEeCCCCc-eeecCc-cCCCCceEEEEcCCc
Q psy12614 278 QVCSTSGPEQGSSVWVRSVNRVIHEGDVK-SLALHGNRLYSGGLDSYLSLSYYPPKT-LVKYPC-TLAQSTPVSLAKDIQ 354 (708)
Q Consensus 278 ~~~~~~g~~~~~~~~~~~~~~~~~~~~v~-~l~~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~-~~~~~~~~~~s~~~~ 354 (708)
|+ ..| ....+..... .+...+.+++.++.|+.++.||.++++ +.++.. .......+.++.+|+
T Consensus 465 ------G~----~~W----~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 465 ------QQ----AAW----EVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGE 530 (689)
T ss_dssp ------TE----EEE----EEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred ------CC----eEe----EccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCE
Confidence 65 233 2333322211 222238899999999999999999887 334431 223345688888988
Q ss_pred EEEE
Q psy12614 355 HVLL 358 (708)
Q Consensus 355 ~l~~ 358 (708)
..++
T Consensus 531 qyv~ 534 (689)
T 1yiq_A 531 QYVT 534 (689)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.38 E-value=2.3e-11 Score=132.69 Aligned_cols=237 Identities=11% Similarity=0.104 Sum_probs=156.9
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEe-----CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCC-----
Q psy12614 23 APEPKVINCIACEPKSSRLAVSR-----ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQG----- 91 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~-----~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~----- 91 (708)
.+|...+..++|||||++||.+. +...|++||+.+++.+...+.+. ....++|+ ++.|+.++.+.
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~----k~~~~~WsDg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV----KFSGISWLGNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE----ESCCCEEETTTEEEEEESSCCC---
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc----eeccEEEeCCCEEEEEEecCccccc
Confidence 34666799999999999999643 23569999999998765433322 12467788 88888887764
Q ss_pred --------cEEEEECCCCeE----eEEEee-cCCceEEEEEecCCCEEEEEeC----CCcEEEEEccCCcEEEEEecccc
Q psy12614 92 --------FVNEYDMRRLNI----KSSTAV-TSGTCWCLSVHKKKRLLAAGTE----QGHINLFQISDEGLLYEKLLDRQ 154 (708)
Q Consensus 92 --------~i~vwd~~~~~~----~~~~~~-~~~~v~~~~~s~~~~~la~~~~----d~~i~iwd~~~~~~~~~~~~~~~ 154 (708)
.|.+|++.++.. +..... |...+..+.|+|||++|+.... .+.|+++|+.++.... ..+..+
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~-~~l~~~ 279 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPL-LTVQGD 279 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCC-EEEECS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCce-EEEeCC
Confidence 399999988652 322233 4556788999999998866443 3589999998763211 334444
Q ss_pred cccEEEEEECCCCCEEEEec-C---C-eEEEEEcCCCce--EEEEEecccCCCCCceeEEEEEEccCCE-EEEEc-CCC-
Q psy12614 155 QGRILCTAWHSSGDYLVTGC-A---A-AVRVWDIHKGHA--IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD-SGG- 224 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~~~-~---d-~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~dg- 224 (708)
....... |+++|..|+..+ . . .|..+|+.++.. ...+... ...+. .|++++. ++... .++
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~-------~~~~~--~~s~~g~~lv~~~~~~g~ 349 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE-------RQQVL--TVHSGSGYLFAEYMVDAT 349 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC-------CSSCE--EEEEETTEEEEEEEETTE
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC-------CCCEE--EEEEECCEEEEEEEECCe
Confidence 5544444 667776665443 2 3 699999987654 2344332 22233 7788774 55444 344
Q ss_pred -cEEEEeCCCCeeEEEee-ccccCeEEEEEeCCCCEEEEEecC----CeEEEEEccC
Q psy12614 225 -FVRFWDGKTGVQWSDVK-THKKDILALTVSEDENYLYCAGVD----PTVVCFQRTR 275 (708)
Q Consensus 225 -~i~~wd~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~d----g~i~iw~~~~ 275 (708)
.|++|++..+ ....+. .....+..+.++++++.++....+ +.+..||+.+
T Consensus 350 ~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 350 ARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp EEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred eEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 6899998754 344443 234567778888888877766554 7899999877
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.38 E-value=1.9e-10 Score=114.65 Aligned_cols=286 Identities=9% Similarity=0.041 Sum_probs=184.4
Q ss_pred CCCCEEEEEeCC-----CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc----------CCCcEEEEEC
Q psy12614 36 PKSSRLAVSRAD-----QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG----------LQGFVNEYDM 98 (708)
Q Consensus 36 ~~~~~la~~~~d-----g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~----------~d~~i~vwd~ 98 (708)
|+++++.+.... +.|.++|..+++.+. .+..-. .+ .++++ +++|+++. .++.|.++|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~-~I~vG~--~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILG-MTDGGF--LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEE-EEEECS--SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEE-EEECCC--CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 577777766542 699999999999887 454434 45 89999 88787775 4779999999
Q ss_pred CCCeEeEEEeec-------CCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCC-C
Q psy12614 99 RRLNIKSSTAVT-------SGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG-D 168 (708)
Q Consensus 99 ~~~~~~~~~~~~-------~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~ 168 (708)
.+++.+..+... ......++|+|||++|+++.. ++.|.+.|..+++.+......+ . ....|++ .
T Consensus 157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g---~---~~~~p~g~~ 230 (426)
T 3c75_H 157 VTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD---C---YHIFPASPT 230 (426)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS---E---EEEEEEETT
T ss_pred CCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC---c---eeeccCCCc
Confidence 999998887642 234567999999999998864 5789999999998874333221 1 1222332 3
Q ss_pred EEEEecCC-eEEEEEcCCCceEEEEE-ecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeE--EEeec-
Q psy12614 169 YLVTGCAA-AVRVWDIHKGHAIHKMS-LDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQW--SDVKT- 242 (708)
Q Consensus 169 ~l~~~~~d-~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~--~~~~~- 242 (708)
.+++.+.| .+.+.+..+++...... .... ........+.|.+++ +++.....+.|.+.|...+... ..+..
T Consensus 231 ~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v---~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~ 307 (426)
T 3c75_H 231 VFYMNCRDGSLARVDFADGETKVTNTEVFHT---EDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEAL 307 (426)
T ss_dssp EEEEEETTSSEEEEECCTTCCEEEECCCCSC---TTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESS
T ss_pred EEEEEcCCCCEEEEECCCCcEEEEeeeeecc---CCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeec
Confidence 44444455 66666665554443211 0000 001111235678887 4666677889999998655422 11110
Q ss_pred ---------cccCeEEEEEeCCCCEEEEEec----------CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc
Q psy12614 243 ---------HKKDILALTVSEDENYLYCAGV----------DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG 303 (708)
Q Consensus 243 ---------~~~~i~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 303 (708)
.......++++|++++++++.. ++.|.++|..+ .+ ....+.. ..
T Consensus 308 ~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T--------~k--------vv~~I~v-g~ 370 (426)
T 3c75_H 308 TEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET--------GE--------RINKIEL-GH 370 (426)
T ss_dssp CTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT--------CC--------EEEEEEE-EE
T ss_pred cccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC--------Ce--------EEEEEEC-CC
Confidence 1122234789999998887753 35799999998 54 3333332 22
Q ss_pred ceEEEEEe--CC-EEEEEc-CCCeEEEEeCCCCceeecCccCCCCceEEEEcC
Q psy12614 304 DVKSLALH--GN-RLYSGG-LDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKD 352 (708)
Q Consensus 304 ~v~~l~~~--~~-~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~ 352 (708)
...+++++ ++ ++++.. .++.|.++|+.+.+..+........+.+.++||
T Consensus 371 ~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~~i~~~~ 423 (426)
T 3c75_H 371 EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQIITTHD 423 (426)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCCEEECCC
T ss_pred CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCcEEEcCC
Confidence 47788888 66 777776 599999999999874433213445555666665
No 224
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.38 E-value=1.2e-11 Score=122.17 Aligned_cols=296 Identities=12% Similarity=0.039 Sum_probs=196.7
Q ss_pred EEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccc
Q psy12614 78 TWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG 156 (708)
Q Consensus 78 ~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 156 (708)
... +..|..++.++.|..|| .+++.+.........+.++...+++. |.+++.+ |..+|. +++.. ..+.....
T Consensus 26 ~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~--~~~~~~~~ 98 (330)
T 3hxj_A 26 ILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEK--WRFDTKKA 98 (330)
T ss_dssp EECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGG--GGSCC---
T ss_pred eEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEE--EEEECCCC
Confidence 443 66788888899999999 88887766655555667777877775 4444444 888886 44432 12222222
Q ss_pred cEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCe
Q psy12614 157 RILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGV 235 (708)
Q Consensus 157 ~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 235 (708)
......+. +..|..++.+ .|..+|.. ++........ ...+.++...+++.+..++.++.|..+|.. ++
T Consensus 99 ~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~-------~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~ 167 (330)
T 3hxj_A 99 IVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTK-------KAIYATPIVSEDGTIYVGSNDNYLYAINPD-GT 167 (330)
T ss_dssp --CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECS-------SCCCSCCEECTTSCEEEECTTSEEEEECTT-SC
T ss_pred cccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCC-------CceeeeeEEcCCCEEEEEcCCCEEEEECCC-CC
Confidence 22223333 4467777777 99999988 8777666543 344566677778888889999999999998 88
Q ss_pred eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCE
Q psy12614 236 QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNR 314 (708)
Q Consensus 236 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~ 314 (708)
....+......+.++...+++... .++ +.+..+| .+ ++ ...........+.++... ...
T Consensus 168 ~~~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~--------g~--------~~~~~~~~~~~~~~~~~~~~g~ 227 (330)
T 3hxj_A 168 EKWRFKTNDAITSAASIGKDGTIY-FGS--DKVYAIN-PD--------GT--------EKWNFYAGYWTVTRPAISEDGT 227 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTCCEE-EES--SSEEEEC-TT--------SC--------EEEEECCSSCCCSCCEECTTSC
T ss_pred EeEEEecCCCceeeeEEcCCCEEE-EEe--CEEEEEC-CC--------Cc--------EEEEEccCCcceeceEECCCCe
Confidence 777766556677778888888644 444 7899999 55 43 233333344567777777 447
Q ss_pred EEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceE
Q psy12614 315 LYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRL 394 (708)
Q Consensus 315 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (708)
+..++.++.+..++.....+..+.........+.+.+++.+.+...++.+..++. +++ .
T Consensus 228 l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~--------------------~ 286 (330)
T 3hxj_A 228 IYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGT--------------------E 286 (330)
T ss_dssp EEEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSC--------------------E
T ss_pred EEEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCc--------------------E
Confidence 7778888888888866655554442333334566677888887778888999885 433 2
Q ss_pred EEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEe
Q psy12614 395 IVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDL 433 (708)
Q Consensus 395 ~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~ 433 (708)
+.... .....+.++...++|.+.+.+.+|.+++...+.
T Consensus 287 ~~~~~-~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 287 KWNFE-TGSWIIATPVIDENGTIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp EEEEE-CSSCCCSCCEECTTCCEEEECTTSCEEEEEC--
T ss_pred EEEEE-cCCccccceEEcCCCEEEEEcCCCeEEEEeccc
Confidence 33332 234556677788889877777799988876654
No 225
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.37 E-value=2.2e-11 Score=120.41 Aligned_cols=298 Identities=9% Similarity=0.035 Sum_probs=197.8
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEee
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAV 109 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 109 (708)
+..+..++. |.+++.++.|..|| .+++.+. ....+. ..+.++... +..|..++.+ |..+|. +++.+..+..
T Consensus 24 ~~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~-~~~~~~--~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~ 95 (330)
T 3hxj_A 24 SPILAKNGT-IYLGSSNKNLYAIN-TDGSVKW-FFKSGE--IIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDT 95 (330)
T ss_dssp CCEECTTSC-EECSSTTTTTEEEC-TTSCEEE-SSCGGG--EEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC
T ss_pred CceEccCCe-EEEEcCCCEEEEEC-CCCcEEE-EEecCC--CcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEEC
Confidence 445555654 66667788999999 7777643 333222 445667776 6777777666 888886 6655444333
Q ss_pred cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCce
Q psy12614 110 TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHA 188 (708)
Q Consensus 110 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~ 188 (708)
.........+. +..|.+++.++.|..+|.. ++.... .......+.++...+++. |..++.+ .|..+|.. ++.
T Consensus 96 ~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~--~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~ 168 (330)
T 3hxj_A 96 KKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWR--FKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTE 168 (330)
T ss_dssp -----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEE--EECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCE
T ss_pred CCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEE--EcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCE
Confidence 32223333444 4567778888999999988 766533 233344556677777787 5556666 99999998 887
Q ss_pred EEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeE
Q psy12614 189 IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268 (708)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 268 (708)
....... ...+.++...+++.+..++ +.|..+| .+++...........+.++...+++. |..++.++.+
T Consensus 169 ~~~~~~~-------~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl 237 (330)
T 3hxj_A 169 KWRFKTN-------DAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHL 237 (330)
T ss_dssp EEEEECS-------SCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEE
T ss_pred eEEEecC-------CCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeE
Confidence 7776643 3456667777888877777 8899999 77877776665566788888888874 5567778888
Q ss_pred EEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceE
Q psy12614 269 VCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPV 347 (708)
Q Consensus 269 ~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 347 (708)
..++.. ++ ...........+.++... +..|..++.++.+..+|........+..+.....++
T Consensus 238 ~~~~~~---------g~--------~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~~~~~ 300 (330)
T 3hxj_A 238 YAINPD---------GT--------EKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWNFETGSWIIATP 300 (330)
T ss_dssp EEECTT---------SC--------EEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECTTSCEEEEEECSSCCCSCC
T ss_pred EEECCC---------CC--------EeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECCCCcEEEEEEcCCccccce
Confidence 888753 32 222333333334455566 678888999989999997544444443233445667
Q ss_pred EEEcCCcEEEEEcCCeEEEEEecC
Q psy12614 348 SLAKDIQHVLLQYTSHLELWSLGS 371 (708)
Q Consensus 348 ~~s~~~~~l~~~~~~~i~i~~~~~ 371 (708)
...++|++.+.+.++.+.+.....
T Consensus 301 ~~d~~g~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 301 VIDENGTIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp EECTTCCEEEECTTSCEEEEEC--
T ss_pred EEcCCCEEEEEcCCCeEEEEeccc
Confidence 778899998888899888877654
No 226
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.35 E-value=4.9e-10 Score=108.97 Aligned_cols=239 Identities=12% Similarity=-0.002 Sum_probs=157.5
Q ss_pred EeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRV 180 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~i 180 (708)
.+..+..........+|+|+++ ++++...++.|..|+. +++. ..+..+...+..++++++|+++++...+ .|.+
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~---~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV---DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE---EEEEESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE---EEEeCCCCccceeeECCCCCEEEEECCCCEEEE
Confidence 3444554556778899999998 5566667889999998 4544 2344456678999999999977766666 8999
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEE-----cC-------------CCcEEEEeCCCCeeEEEeec
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITG-----DS-------------GGFVRFWDGKTGVQWSDVKT 242 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~-----~~-------------dg~i~~wd~~~~~~~~~~~~ 242 (708)
|+.. ++.......... .....+..+++.++|++... .. .+.|..||..+++.....
T Consensus 112 ~~~~-g~~~~~~~~~~~---~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-- 185 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRYAG---KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-- 185 (305)
T ss_dssp ECTT-SCEEEEECEETT---EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--
T ss_pred ECCC-CCEEEEEeccCC---CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--
Confidence 9985 554322211110 00234668999999986653 21 356888888777654433
Q ss_pred cccCeEEEEEeCCCCEEEEEecC------CeEEEEEccCCcccccCCCCCCCCcceEEeEEE-eccccceEEEEEe--CC
Q psy12614 243 HKKDILALTVSEDENYLYCAGVD------PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR-VIHEGDVKSLALH--GN 313 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~v~~l~~~--~~ 313 (708)
.......++|+||++.|+.+... +.|..|++.. +. ......+ .........++++ |+
T Consensus 186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~--------~~------l~~~~~~~~~~~~~pdgi~~d~~G~ 251 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD--------GA------LHDRRHFASVPDGLPDGFCVDRGGW 251 (305)
T ss_dssp EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET--------TE------EEEEEEEECCSSSCCCSEEECTTSC
T ss_pred cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC--------CC------ccCCeEEEECCCCCCCeEEECCCCC
Confidence 34566889999999988887765 6899999875 21 0011111 1123345567777 55
Q ss_pred EEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEE
Q psy12614 314 RLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWS 368 (708)
Q Consensus 314 ~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~ 368 (708)
|.+++.+ .|.+|+.....+..+..+. ....++|+++++.|..+..+.+..++
T Consensus 252 -lwv~~~~-gv~~~~~~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 252 -LWSSSGT-GVCVFDSDGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp -EEECCSS-EEEEECTTSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred -EEEecCC-cEEEECCCCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 5555544 5999999777666655333 57789999999888877666665544
No 227
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.35 E-value=2.1e-11 Score=119.69 Aligned_cols=170 Identities=6% Similarity=0.026 Sum_probs=131.2
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe---------E-eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN---------I-KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~---------~-~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd 139 (708)
.++..++++ .+++++|+.+ .+++|+++..+ . ......+.. |+.++| |+++|+++ .++.|++||
T Consensus 38 ~~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 458899999 7888888887 45569865433 1 112234566 999999 99999998 889999999
Q ss_pred ccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE
Q psy12614 140 ISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII 218 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~ 218 (708)
+.+.... .....+...+.++.+.+.. +++++.| .|.+||+.++.... + ...|.+++|+|+| ++
T Consensus 113 v~sl~~~--~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~-~----------~~~Vs~v~WSpkG-~~ 176 (388)
T 1xip_A 113 LEELSEF--RTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ-L----------AQNVTSFDVTNSQ-LA 176 (388)
T ss_dssp SSSTTCE--EEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE-E----------EESEEEEEECSSE-EE
T ss_pred chhhhcc--CccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc-c----------cCCceEEEEcCCc-eE
Confidence 9876643 4455667778888877553 8888888 99999999887643 2 4579999999999 78
Q ss_pred EEcCCCcEEEEeCCCCee--EEEe------e---ccccCeEEEEEeCCCCEEEEE
Q psy12614 219 TGDSGGFVRFWDGKTGVQ--WSDV------K---THKKDILALTVSEDENYLYCA 262 (708)
Q Consensus 219 ~~~~dg~i~~wd~~~~~~--~~~~------~---~~~~~i~~~~~s~~~~~l~~~ 262 (708)
.|..||.+++|+...++. ..++ . +|...|.++.|.+++.++++=
T Consensus 177 vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 177 VLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 899999999999877765 5555 2 367889999999999887753
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.33 E-value=1.5e-09 Score=116.99 Aligned_cols=302 Identities=12% Similarity=0.090 Sum_probs=197.1
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCC---------CcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEe
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLS---------NSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTA 108 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~---------~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 108 (708)
+..|.+++.++.|.-+|..+|+.+= .+....-. ..-..+++.++.|++++.|+.|..+|..+|+.+..+.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIW-TYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEE-EECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEE-EEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeec
Confidence 5567777778999999999998765 33322100 0112445568899999999999999999999998887
Q ss_pred ec-C----CceEEEEEecCCCEEEEEeC------CCcEEEEEccCCcEEEEEeccccc----------------------
Q psy12614 109 VT-S----GTCWCLSVHKKKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQQ---------------------- 155 (708)
Q Consensus 109 ~~-~----~~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~~---------------------- 155 (708)
.. . ..+.+--.- .+..+++++. ++.|+.+|..+|+.+.........
T Consensus 156 ~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~ 234 (677)
T 1kb0_A 156 TFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK 234 (677)
T ss_dssp TTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred CCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCc
Confidence 54 1 122211111 2345555543 689999999999988654432211
Q ss_pred --------ccEEEEEECCCCCEEEEecCC--------------------eEEEEEcCCCceEEEEEecccCC--CCCcee
Q psy12614 156 --------GRILCTAWHSSGDYLVTGCAA--------------------AVRVWDIHKGHAIHKMSLDKSSK--FSKNTA 205 (708)
Q Consensus 156 --------~~v~~~~~s~d~~~l~~~~~d--------------------~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~ 205 (708)
.....++++|++..|+.+..+ .|..+|..+|+.+..+....... +.....
T Consensus 235 ~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 314 (677)
T 1kb0_A 235 WWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQP 314 (677)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCC
Confidence 011357888999888887655 29999999999998887642100 000111
Q ss_pred EEEEEEccCC---E-EEEEcCCCcEEEEeCCCCeeEEEeecccc-----------Ce-----------------------
Q psy12614 206 VWCVAFCADF---T-IITGDSGGFVRFWDGKTGVQWSDVKTHKK-----------DI----------------------- 247 (708)
Q Consensus 206 v~~~~~~~~~---~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~-----------~i----------------------- 247 (708)
..-+....+| . ++.++.+|.++++|..+|+.+..+..... .+
T Consensus 315 p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~ 394 (677)
T 1kb0_A 315 MILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHN 394 (677)
T ss_dssp CEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSC
T ss_pred cEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccC
Confidence 2222333466 3 78889999999999999998876542210 01
Q ss_pred -EEEEEeCCCCEEEEEecC-------------------------------------------CeEEEEEccCCcccccCC
Q psy12614 248 -LALTVSEDENYLYCAGVD-------------------------------------------PTVVCFQRTRKPQVCSTS 283 (708)
Q Consensus 248 -~~~~~s~~~~~l~~~~~d-------------------------------------------g~i~iw~~~~~~~~~~~~ 283 (708)
..++|+|++.++++...+ |.|..||+.+
T Consensus 395 w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t-------- 466 (677)
T 1kb0_A 395 WHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA-------- 466 (677)
T ss_dssp SSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT--------
T ss_pred CCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC--------
Confidence 157889998888876432 6788999988
Q ss_pred CCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc-eeecC-ccCCCCceEEEEcCCcEEEE
Q psy12614 284 GPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT-LVKYP-CTLAQSTPVSLAKDIQHVLL 358 (708)
Q Consensus 284 g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~-~~~~~-~~~~~~~~~~~s~~~~~l~~ 358 (708)
|+ ..|. .. +...+.+..+. +..++.++.|+.+++||..+++ +..+. ........+.+..+|+..+.
T Consensus 467 G~----~~W~----~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 467 QK----AAWS----VE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp TE----EEEE----EE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred Cc----EEee----cC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 64 3332 22 22233333333 8889999999999999999877 33333 12234456777888876554
No 229
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.30 E-value=1.6e-08 Score=99.11 Aligned_cols=209 Identities=14% Similarity=0.027 Sum_probs=141.8
Q ss_pred CcEEEEEEe--CC-EEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE
Q psy12614 72 NSIECLTWF--ND-RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE 148 (708)
Q Consensus 72 ~~v~~l~~~--~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~ 148 (708)
.-..+.+|+ ++ .+++...++.|..||..+++... +. ....+.+++++++|+++++. .+ .|.+||..+++....
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLH 124 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEE
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEE
Confidence 345778888 34 55566678999999999876532 32 34679999999999877654 44 499999988886532
Q ss_pred Eeccc--ccccEEEEEECCCCCEEEEecC------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E-
Q psy12614 149 KLLDR--QQGRILCTAWHSSGDYLVTGCA------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I- 217 (708)
Q Consensus 149 ~~~~~--~~~~v~~~~~s~d~~~l~~~~~------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l- 217 (708)
..... ....+..++++|+|+++++... . .|..++ +++.. .+... ......++|+||++ +
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~-------~~~~~~i~~s~dg~~ly 194 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFAD-------ISIPNSICFSPDGTTGY 194 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEE-------ESSEEEEEECTTSCEEE
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCC-------CcccCCeEEcCCCCEEE
Confidence 22211 1246899999999997765532 2 555555 45433 22221 23467899999995 4
Q ss_pred EEEcCCCcEEEEeCC--CC-e-----eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCC
Q psy12614 218 ITGDSGGFVRFWDGK--TG-V-----QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGS 289 (708)
Q Consensus 218 ~~~~~dg~i~~wd~~--~~-~-----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~ 289 (708)
++...++.|.+||.. ++ + ....+.........++++++|++.++...++.|..|+. . ++
T Consensus 195 v~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~--------g~---- 261 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-D--------GN---- 261 (326)
T ss_dssp EEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-T--------CC----
T ss_pred EEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-C--------CC----
Confidence 455567899999985 55 3 22233333456778999999987777666789999998 4 43
Q ss_pred cceEEeEEEeccccceEEEEEe
Q psy12614 290 SVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 290 ~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
....+..+...+.+++|.
T Consensus 262 ----~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 262 ----HIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp ----EEEEEECSCSBEEEEEEE
T ss_pred ----EEEEEECCCCCcEEEEEe
Confidence 344555566678999987
No 230
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.27 E-value=1.4e-10 Score=113.83 Aligned_cols=256 Identities=8% Similarity=-0.100 Sum_probs=162.6
Q ss_pred cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEe----------CCCcEEEEEccCCcEEEEEecccc-----cc
Q psy12614 92 FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT----------EQGHINLFQISDEGLLYEKLLDRQ-----QG 156 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----------~d~~i~iwd~~~~~~~~~~~~~~~-----~~ 156 (708)
+|.+.|..+++.+.++..-..+ .++++||+++++++. .++.|.+||..+++.+....+.+. ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8889999999999998865555 799999999998886 368899999999998743333210 12
Q ss_pred cEEEEEECCCCCEEEEecC--C-eEEE--EEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEE
Q psy12614 157 RILCTAWHSSGDYLVTGCA--A-AVRV--WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFW 229 (708)
Q Consensus 157 ~v~~~~~s~d~~~l~~~~~--d-~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~w 229 (708)
....++|+|||++++++.. + .+.+ +|..+ +..+..+ .. ..+.|++ .+++.+.||.+.+.
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-------~~----~~~~p~g~~~~~~~~~dg~~~~v 190 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-------SC----FHIHPGAAATHYLGSCPASLAAS 190 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-------SC----CCCEEEETTEEECCCCTTSCEEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-------Cc----eEEccCCCeEEEEEcCCCCEEEE
Confidence 3568899999999998763 3 6888 99877 4555432 11 1233555 36677778888888
Q ss_pred eCCC-----CeeEEE----eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec
Q psy12614 230 DGKT-----GVQWSD----VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI 300 (708)
Q Consensus 230 d~~~-----~~~~~~----~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 300 (708)
|+.+ ++.... +.....+. . ++++..++..+. +.+.+.|... +. .
T Consensus 191 d~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~--------~~----------~---- 243 (368)
T 1mda_H 191 DLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPA--------AG----------A---- 243 (368)
T ss_dssp ECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCS--------SC----------C----
T ss_pred ECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCC--------Cc----------c----
Confidence 8876 433211 11112232 3 666666666666 8888888765 21 0
Q ss_pred cccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE-c-C--------CeEEEEEec
Q psy12614 301 HEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ-Y-T--------SHLELWSLG 370 (708)
Q Consensus 301 ~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~-~--------~~i~i~~~~ 370 (708)
..+..|.+.................++++|+++.+.+. . . +.+.++|..
T Consensus 244 ---------------------~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~ 302 (368)
T 1mda_H 244 ---------------------TMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTAS 302 (368)
T ss_dssp ---------------------EEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESS
T ss_pred ---------------------eEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECC
Confidence 00111221110000000001112337899998887764 3 2 357799998
Q ss_pred CCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEE-E-E-cCCceEEEEEEe
Q psy12614 371 SAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVA-Y-S-TESCVRLHSLDL 433 (708)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~-~-~-~d~~i~i~~~~~ 433 (708)
+.+ .+..+..+ .....++|+|||++++ + . .++.|.++|+.+
T Consensus 303 t~~--------------------vv~~i~vg--~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 303 VGQ--------------------TSGPISNG--HDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp SCC--------------------EEECCEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred CCe--------------------EEEEEECC--CCcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 866 33333332 2578899999998544 4 4 489999999986
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.23 E-value=5.1e-09 Score=113.22 Aligned_cols=310 Identities=13% Similarity=0.085 Sum_probs=185.9
Q ss_pred eCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCc----------e-EEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE
Q psy12614 80 FNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGT----------C-WCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE 148 (708)
Q Consensus 80 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~----------v-~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~ 148 (708)
.++.+++++.++.|..+|..+|+.+..+...... + ..+++ ++..+++++.|+.|..+|..+|+.+..
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeee
Confidence 3888899999999999999999999888643321 0 11222 356788889999999999999998865
Q ss_pred EecccccccEEEEEECC---CCCEEEEec------CC-eEEEEEcCCCceEEEEEecccC-C--C---------------
Q psy12614 149 KLLDRQQGRILCTAWHS---SGDYLVTGC------AA-AVRVWDIHKGHAIHKMSLDKSS-K--F--------------- 200 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~---d~~~l~~~~------~d-~i~iwd~~~~~~~~~~~~~~~~-~--~--------------- 200 (708)
.....+......+..+| ++. ++.++ .+ .|..||..+|+.+.++...... . +
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred ecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 54430111111111122 444 44443 25 8999999999999887632100 0 0
Q ss_pred ------CCceeEEEEEEccCC-EEEEEcCCC-------------------cEEEEeCCCCeeEEEeec--cc-------c
Q psy12614 201 ------SKNTAVWCVAFCADF-TIITGDSGG-------------------FVRFWDGKTGVQWSDVKT--HK-------K 245 (708)
Q Consensus 201 ------~~~~~v~~~~~~~~~-~l~~~~~dg-------------------~i~~wd~~~~~~~~~~~~--~~-------~ 245 (708)
........+++.|++ .++.+..++ .|..+|.++|+.+-.+.. |. .
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 305 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ 305 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence 000011256788765 577777765 399999999999877654 21 1
Q ss_pred CeEEEEEeCCCC---EEEEEecCCeEEEEEccCCcccccCCCCCC-----CCcceEEeEE------E---------eccc
Q psy12614 246 DILALTVSEDEN---YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQ-----GSSVWVRSVN------R---------VIHE 302 (708)
Q Consensus 246 ~i~~~~~s~~~~---~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~-----~~~~~~~~~~------~---------~~~~ 302 (708)
.........+|+ .++.++.+|.++++|..+ |+.. ....|..... . ....
T Consensus 306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~t--------G~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~ 377 (689)
T 1yiq_A 306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRAT--------GELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGK 377 (689)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTT--------CCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSS
T ss_pred CcEEEeeccCCcEEEEEEEECCCCeEEEEECCC--------CCEeccccccccccccccCccCCCcccchhhccccCCCC
Confidence 222222333564 788899999999999998 6510 0001111000 0 0000
Q ss_pred -----------cceEEEEEe--CCEEEEEcC---------------------------------------------CCeE
Q psy12614 303 -----------GDVKSLALH--GNRLYSGGL---------------------------------------------DSYL 324 (708)
Q Consensus 303 -----------~~v~~l~~~--~~~l~s~~~---------------------------------------------d~~i 324 (708)
..-..++++ ..++++... +|.|
T Consensus 378 ~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l 457 (689)
T 1yiq_A 378 RNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKL 457 (689)
T ss_dssp CEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEE
T ss_pred eeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeE
Confidence 001124555 345544321 4789
Q ss_pred EEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCC
Q psy12614 325 SLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNN 403 (708)
Q Consensus 325 ~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (708)
..||+.++++.-............++..+.+++.+ .++.++.||..+++ .+.+...+..
T Consensus 458 ~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~--------------------~lw~~~~~~~ 517 (689)
T 1yiq_A 458 IAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGE--------------------KLWEQPAASG 517 (689)
T ss_dssp EEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC--------------------EEEEEECSSC
T ss_pred EEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCc--------------------cceeeeCCCC
Confidence 99999988733222111222333566666666664 78999999999988 6777765544
Q ss_pred CceEEEEeCCCCcEEEE
Q psy12614 404 ATIRCSVVSNDGKYVAY 420 (708)
Q Consensus 404 ~~i~~~~~s~~g~~l~~ 420 (708)
.....+.|+.+|+..++
T Consensus 518 ~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 518 VMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp CCSCCEEEEETTEEEEE
T ss_pred cccCceEEEECCEEEEE
Confidence 33344667778875543
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.23 E-value=1.2e-09 Score=108.17 Aligned_cols=231 Identities=6% Similarity=-0.024 Sum_probs=152.5
Q ss_pred CcEEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCCeEEEEEe-------cCCCCCcEEEEEEe-CCEEEEEcC------C
Q psy12614 27 KVINCIACEPKSSRLAVSR--ADQSIEIWDISETPHVDRVFI-------GDPLSNSIECLTWF-NDRLFSGGL------Q 90 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~--~dg~v~iwd~~~~~~~~~~~~-------~h~~~~~v~~l~~~-~~~l~s~~~------d 90 (708)
..+..++++|+|+++++.. .++.+.||.+.+++.. .+. ++. ..+.+++++ ...|..+.. +
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~--~~p~~~~~~~~~~--~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI--PFPPQSGNAIITF--DTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE--ESCCCCSSCCCCC--SCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee--cCCCcccCcccce--eEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 6799999999999888863 2343566665555432 222 234 689999999 455555442 5
Q ss_pred CcEEEEECCCCeEeEEEeec------CCceEEEEEecCCCEE-EEEe---CCCcEEEEEccCCcEEEEEecccc------
Q psy12614 91 GFVNEYDMRRLNIKSSTAVT------SGTCWCLSVHKKKRLL-AAGT---EQGHINLFQISDEGLLYEKLLDRQ------ 154 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l-a~~~---~d~~i~iwd~~~~~~~~~~~~~~~------ 154 (708)
+.|.+||+.+++.+..+... ...+..+++++++..+ ++.. .++.|.+||..+++.. +.+.+|
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~--r~~~~~~~~~~~ 170 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAA--RVLQGYPGIAPE 170 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEE--EECTTCTTTSCC
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEE--EEecCCCccccc
Confidence 79999999999977776532 2356899999875554 4444 5789999999888764 333221
Q ss_pred -----------------------cccEEEEEECCCCCEEEEecCC--eEEEEEcC---CCce--------EEEEEecccC
Q psy12614 155 -----------------------QGRILCTAWHSSGDYLVTGCAA--AVRVWDIH---KGHA--------IHKMSLDKSS 198 (708)
Q Consensus 155 -----------------------~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~---~~~~--------~~~~~~~~~~ 198 (708)
...+..++|+||++.|+.+... .+..++.. .+.. +... +
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--g--- 245 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY--S--- 245 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE--E---
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec--c---
Confidence 0236889999999988887665 55555432 1110 0111 0
Q ss_pred CCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec-cccCeEEEEEeCCCCEEEEEecCCeEEEE
Q psy12614 199 KFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT-HKKDILALTVSEDENYLYCAGVDPTVVCF 271 (708)
Q Consensus 199 ~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~iw 271 (708)
+......++++++|. +++...++.|.+||.++++....... +.....+++|.++++++++....+.+.+|
T Consensus 246 ---~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 246 ---EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp ---ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred ---cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 022455789999997 56666788999999856764333322 24568899999999887777655444333
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.21 E-value=8.5e-09 Score=111.22 Aligned_cols=237 Identities=14% Similarity=0.110 Sum_probs=163.5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecC-CC--CCcEEE-EEEeCCEEEEEcC------CCcEEEEECCCCeEeEE
Q psy12614 37 KSSRLAVSRADQSIEIWDISETPHVDRVFIGD-PL--SNSIEC-LTWFNDRLFSGGL------QGFVNEYDMRRLNIKSS 106 (708)
Q Consensus 37 ~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h-~~--~~~v~~-l~~~~~~l~s~~~------d~~i~vwd~~~~~~~~~ 106 (708)
++..|++++.|+.|..+|..+|+.+- .+..+ .. ...+.+ ....++.+++++. ++.|..+|..+|+.+..
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W-~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVW-HQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEE-EEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEe-eecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 35678888899999999999999876 44433 10 011221 1223667776654 79999999999999887
Q ss_pred EeecCCc--------------------------------eEEEEEecCCCEEEEEeCCC-------------------cE
Q psy12614 107 TAVTSGT--------------------------------CWCLSVHKKKRLLAAGTEQG-------------------HI 135 (708)
Q Consensus 107 ~~~~~~~--------------------------------v~~~~~s~~~~~la~~~~d~-------------------~i 135 (708)
+...... ...++++|++.++++++.++ .|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 7642211 13578999999998887654 59
Q ss_pred EEEEccCCcEEEEEeccccc-------ccEEEEEECCCC---CEEEEecCC-eEEEEEcCCCceEEEEEecccCC---C-
Q psy12614 136 NLFQISDEGLLYEKLLDRQQ-------GRILCTAWHSSG---DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSK---F- 200 (708)
Q Consensus 136 ~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~s~d~---~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~---~- 200 (708)
..+|..+|+.........|. .....+....+| ..++.++.+ .+.++|..+|+.+.........- +
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d 365 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYD 365 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEC
T ss_pred EEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccC
Confidence 99999999998665554442 122223333477 678888888 99999999999988876432000 0
Q ss_pred CCceeE------------------------EEEEEccCC-EEEEEcC---------------------------------
Q psy12614 201 SKNTAV------------------------WCVAFCADF-TIITGDS--------------------------------- 222 (708)
Q Consensus 201 ~~~~~v------------------------~~~~~~~~~-~l~~~~~--------------------------------- 222 (708)
....++ ..++|+|++ .+++...
T Consensus 366 ~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 445 (677)
T 1kb0_A 366 KHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKF 445 (677)
T ss_dssp TTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEE
T ss_pred CCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccc
Confidence 000011 146888876 4444321
Q ss_pred ----------CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 223 ----------GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 223 ----------dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.|.|..||+.+++.+..+. +...+....+..++.+++.++.||.+++||..+
T Consensus 446 ~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 446 FNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp ECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCC
Confidence 2789999999999888876 334455556777888999999999999999999
No 234
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.20 E-value=1.8e-09 Score=117.72 Aligned_cols=238 Identities=12% Similarity=0.064 Sum_probs=152.9
Q ss_pred CcEEEEEEe--CCEEEEE-----cCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCC-----------
Q psy12614 72 NSIECLTWF--NDRLFSG-----GLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG----------- 133 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~-----~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~----------- 133 (708)
..+..++|| |++||-+ +...+|++||+++++.+... .+......++|+ |++.|+.++.+.
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 578899999 8877733 23357999999999865431 111123578999 999999988774
Q ss_pred --cEEEEEccCCcE--EEEEeccc-ccccEEEEEECCCCCEEEEec----CC-eEEEEEcCCCc-eEEEEEecccCCCCC
Q psy12614 134 --HINLFQISDEGL--LYEKLLDR-QQGRILCTAWHSSGDYLVTGC----AA-AVRVWDIHKGH-AIHKMSLDKSSKFSK 202 (708)
Q Consensus 134 --~i~iwd~~~~~~--~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~----~d-~i~iwd~~~~~-~~~~~~~~~~~~~~~ 202 (708)
.|++|++.++.. ........ +...+..+.|+|||++|+... .. .|.++|+.++. ....+...
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~------- 279 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD------- 279 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS-------
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC-------
Confidence 399999987642 21133333 455678999999999886433 23 79999998764 34444433
Q ss_pred ceeEEEEEEccCC-EE-EEEcCC---CcEEEEeCCCCee--EEEeeccccCeEEEEEeCCCCEEEEEecCC---eEEEEE
Q psy12614 203 NTAVWCVAFCADF-TI-ITGDSG---GFVRFWDGKTGVQ--WSDVKTHKKDILALTVSEDENYLYCAGVDP---TVVCFQ 272 (708)
Q Consensus 203 ~~~v~~~~~~~~~-~l-~~~~~d---g~i~~wd~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~i~iw~ 272 (708)
....... ++++| ++ +....+ +.|..+|+.++.. ...+..|...+. .|+++++.|+....++ .|++|+
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEE
Confidence 2223333 45555 54 444443 6799999987654 345555666665 8999998888766544 688888
Q ss_pred ccCCcccccCCCCCCCCcceEEeEEEe-ccccceEEEEEe--CCEEEEEcCC----CeEEEEeCCCCceeecC
Q psy12614 273 RTRKPQVCSTSGPEQGSSVWVRSVNRV-IHEGDVKSLALH--GNRLYSGGLD----SYLSLSYYPPKTLVKYP 338 (708)
Q Consensus 273 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~~l~~~--~~~l~s~~~d----~~i~iw~~~~~~~~~~~ 338 (708)
+.. +. ...+. ...+.+..+.++ ++.++....+ +.+..||+.++....+.
T Consensus 357 ~~g--------~~---------~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 357 YEG--------KR---------VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp TTS--------CE---------EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred CCC--------Ce---------eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 876 32 22222 233455666665 4444444333 78999999877644433
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.17 E-value=1.4e-11 Score=122.91 Aligned_cols=199 Identities=10% Similarity=0.009 Sum_probs=117.0
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCC-c
Q psy12614 37 KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSG-T 113 (708)
Q Consensus 37 ~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-~ 113 (708)
++.+|++++.||.|..||..+|+.+- .+.. . .+.+..+. +..+++++.||.|+.||.++|+.+..+..+.. .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W-~~~~-~---~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKW-TLKE-D---PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEE-EEEC-C---CSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEE-EecC-C---CceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 57889999999999999999999875 4443 2 22233333 66777788999999999999988766653321 1
Q ss_pred eE-EEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEE
Q psy12614 114 CW-CLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHK 191 (708)
Q Consensus 114 v~-~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~ 191 (708)
+. +..+. ++..+++++.++.|+.||..+|+... .+..+. ...++|++..+++++.+ .|..||..+|+.+..
T Consensus 83 ~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w--~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 83 VQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQ--TLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCE
T ss_pred cccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEE--EecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEe
Confidence 11 11111 34567788889999999999998863 333322 23456788899999988 999999999998776
Q ss_pred EEecccCCCCCceeEEEEEEccC----CEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeE-EEEEeCCCC
Q psy12614 192 MSLDKSSKFSKNTAVWCVAFCAD----FTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDIL-ALTVSEDEN 257 (708)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~~~~----~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~-~~~~s~~~~ 257 (708)
+... .....++.++ +.+++++.+|.|..||..+|+.+..... ..++. ...+++++.
T Consensus 156 ~~~~---------~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 156 ATYF---------DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVWQREGL 216 (369)
T ss_dssp EEEE---------EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEEEEECTTSSC
T ss_pred Eecc---------cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-CCceEEEEEecCCce
Confidence 6532 1122333332 5688889999999999999998877663 33443 344455553
No 236
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.17 E-value=6.9e-09 Score=102.58 Aligned_cols=239 Identities=10% Similarity=0.062 Sum_probs=153.6
Q ss_pred CceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecc-------cccccEEEEEECCCCCEEEEecC-----C-
Q psy12614 112 GTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLD-------RQQGRILCTAWHSSGDYLVTGCA-----A- 176 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~-------~~~~~v~~~~~s~d~~~l~~~~~-----d- 176 (708)
..+..++++++|+.+++... ++.++||.+.++++. .+. .+-..+..++++++++++++-.. +
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~---~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI---PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE---ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee---cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC
Confidence 67899999999998887542 343556665555542 221 24467999999999986665543 4
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC-CEE-EEEc---CCCcEEEEeCCCCeeEEEeeccc-------
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD-FTI-ITGD---SGGFVRFWDGKTGVQWSDVKTHK------- 244 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l-~~~~---~dg~i~~wd~~~~~~~~~~~~~~------- 244 (708)
.|.+||+.+++.+..+....... .+...+..+++.++ +.+ ++-. .++.|.+||+.+++..+.+.+|.
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~-~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPIT-LSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTS-CTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred eEEEEECCCCeEEEEEECChhhc-ccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 99999999999887776532111 11345688999975 564 4544 57899999998887766554321
Q ss_pred ----------------------cCeEEEEEeCCCCEEEEEecCC-eEEEEEccCCcccccCCCCCCCCcceEEeEEEecc
Q psy12614 245 ----------------------KDILALTVSEDENYLYCAGVDP-TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH 301 (708)
Q Consensus 245 ----------------------~~i~~~~~s~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 301 (708)
..+..++++||++.|+.+..++ .+..++... ...+. .............++
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~-----~~~~~-~~~~~~~~~~~~~g~ 246 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSAD-----LSNLQ-LTDAELGSKIERYSE 246 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHH-----HTCTT-CCHHHHHTTCEEEEE
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHH-----hcCCC-CChhhhhcceEeccc
Confidence 2357899999999999887766 454454321 00000 000000000011233
Q ss_pred ccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecC-cc-CCCCceEEEEcCCcEEEEEc
Q psy12614 302 EGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYP-CT-LAQSTPVSLAKDIQHVLLQY 360 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~-~~-~~~~~~~~~s~~~~~l~~~~ 360 (708)
......++++ +.++++...++.|.+|+..++.+..+. .+ ...+..++++++++++++..
T Consensus 247 ~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 247 KPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred CCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 4456678887 888888888999999999444433332 12 44567899999988777753
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.16 E-value=4.5e-08 Score=90.30 Aligned_cols=213 Identities=11% Similarity=0.048 Sum_probs=146.9
Q ss_pred eeeeeeeeccCCC--CcEEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEE-c
Q psy12614 14 YGVHNIKFYAPEP--KVINCIACEPKSSRLAVSRA--DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSG-G 88 (708)
Q Consensus 14 ~~~~~~~~~~~h~--~~v~~~~~s~~~~~la~~~~--dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~-~ 88 (708)
+..+-++.+ .|. .....++|+||+.+.++.+. ++.|.+.|+.+++.+.....+.. .....+++.++.|+.+ -
T Consensus 7 ~~~~vv~~~-p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~--~fgeGi~~~g~~lyv~t~ 83 (266)
T 2iwa_A 7 YIVEVLNEF-PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS--YFGEGLTLLNEKLYQVVW 83 (266)
T ss_dssp EEEEEEEEE-ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT--CCEEEEEEETTEEEEEET
T ss_pred cCceEEEEE-ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC--cceEEEEEeCCEEEEEEe
Confidence 334444444 344 34689999998754444332 57999999999998874333332 3445778886666554 5
Q ss_pred CCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccc---ccEEEEEECC
Q psy12614 89 LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQ---GRILCTAWHS 165 (708)
Q Consensus 89 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~s~ 165 (708)
.++.+.++|..+++.+.++..... ....+++||+.|+++..++.|.++|..+.+........... .....+.|.
T Consensus 84 ~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred cCCEEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 689999999999999988863311 12456778888888777899999999998876333332222 236678888
Q ss_pred CCCEEEEecCC-eEEEEEcCCCceEEEEEecc-------cCCCCCceeEEEEEEccCC-E-EEEEcCCCcEEEEeCCC
Q psy12614 166 SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDK-------SSKFSKNTAVWCVAFCADF-T-IITGDSGGFVRFWDGKT 233 (708)
Q Consensus 166 d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~~wd~~~ 233 (708)
++...+....+ .|.+.|..+++.+..+.... ... ........++|+|++ + ++++...+.+.+.++..
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~-~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGF-RDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTC-TTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccc-cccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 67544444445 99999999999999998641 000 112467899999998 4 77787888998888754
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.16 E-value=1.2e-07 Score=93.13 Aligned_cols=224 Identities=12% Similarity=0.073 Sum_probs=141.6
Q ss_pred CCCCEEEEecCC--eEEEEEcCCC----ceEEEEEecccC-CCCCceeEEEEEEccCCEEEEEcCC------CcEEEEeC
Q psy12614 165 SSGDYLVTGCAA--AVRVWDIHKG----HAIHKMSLDKSS-KFSKNTAVWCVAFCADFTIITGDSG------GFVRFWDG 231 (708)
Q Consensus 165 ~d~~~l~~~~~d--~i~iwd~~~~----~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~l~~~~~d------g~i~~wd~ 231 (708)
++.++|+..+.. .|.++|+.+. +....+....-. . ........+..+|+|-++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~-~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKV-SGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHH-HCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccc-cCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEEC
Confidence 888888876655 9999998755 455555200000 0 00234567888999954444333 78999999
Q ss_pred CCCeeEEEeecccc---CeEEEEEeCCCCEEEEEe-------------------cCCeEEEEEccCCcccccCCCCCCCC
Q psy12614 232 KTGVQWSDVKTHKK---DILALTVSEDENYLYCAG-------------------VDPTVVCFQRTRKPQVCSTSGPEQGS 289 (708)
Q Consensus 232 ~~~~~~~~~~~~~~---~i~~~~~s~~~~~l~~~~-------------------~dg~i~iw~~~~~~~~~~~~g~~~~~ 289 (708)
++++.+.++..... .-..+.|+|+++.+++.. ....|.+||+.+ ++
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~--------~k---- 239 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK--------RK---- 239 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT--------TE----
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC--------Cc----
Confidence 99999998863222 223578899999888874 367999999987 43
Q ss_pred cceEEeEEEec--cccceEEEEE--e--CCEEEEEc------CCCeEEEEeCCCCceee-----cC-----c-----c--
Q psy12614 290 SVWVRSVNRVI--HEGDVKSLAL--H--GNRLYSGG------LDSYLSLSYYPPKTLVK-----YP-----C-----T-- 340 (708)
Q Consensus 290 ~~~~~~~~~~~--~~~~v~~l~~--~--~~~l~s~~------~d~~i~iw~~~~~~~~~-----~~-----~-----~-- 340 (708)
....+.. .......+.| + +.+++.++ .+++|.+|..+.+.+.. +. . +
T Consensus 240 ----~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~ 315 (462)
T 2ece_A 240 ----RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKP 315 (462)
T ss_dssp ----EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGG
T ss_pred ----EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccc
Confidence 2333332 1123455555 5 66666555 56678766554432100 00 0 0
Q ss_pred ----CCCCceEEEEcCCcEEEEE--cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCC-----------
Q psy12614 341 ----LAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNN----------- 403 (708)
Q Consensus 341 ----~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 403 (708)
......+.+|+||++|.++ ..+.|.+|++.... .+..+..+..+..
T Consensus 316 f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~-----------------~~~lv~~I~tGG~~~~~~~~~G~~ 378 (462)
T 2ece_A 316 FKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPF-----------------KPVLTGKVKLGGIFHRADHPAGHK 378 (462)
T ss_dssp GTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTT-----------------SCEEEEEEECBTTTTCBCCTTSCC
T ss_pred cccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCC-----------------CcEEEEEEEeCCeecccccccccc
Confidence 1345779999999999886 56789999986432 1223333433311
Q ss_pred --CceEEEEeCCCCcEEEEEc
Q psy12614 404 --ATIRCSVVSNDGKYVAYST 422 (708)
Q Consensus 404 --~~i~~~~~s~~g~~l~~~~ 422 (708)
.....++++|||++|++++
T Consensus 379 ~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 379 LTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCCEEEEcCCCCEEEEEc
Confidence 1357889999999999865
No 239
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.15 E-value=1e-07 Score=102.66 Aligned_cols=300 Identities=12% Similarity=0.142 Sum_probs=189.5
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCC---------c-EEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEE
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN---------S-IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~---------~-v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
+..|.+++.++.|.-+|..+|+.+= .+.... .. . -..+++.++.++.++.|+.|..+|..+|+.+..+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELW-RYDPEV-AKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEE-EECCCC-CGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhce-EECCCC-CccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 5677778888999999999999865 333221 00 0 1234455788999999999999999999998887
Q ss_pred eecC----CceEE-EEEecCCCEEEEEeC------CCcEEEEEccCCcEEEEEecccc-c--------------------
Q psy12614 108 AVTS----GTCWC-LSVHKKKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQ-Q-------------------- 155 (708)
Q Consensus 108 ~~~~----~~v~~-~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~-~-------------------- 155 (708)
.... ..+.+ ..+ .++ .++++.. ++.|..+|..+|+.+........ .
T Consensus 144 ~~~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp ECSCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred ccCCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence 6421 11111 111 133 5555543 58999999999998865443211 0
Q ss_pred --------ccEEEEEECCCCCEEEEecCC-e-------------------EEEEEcCCCceEEEEEecccCC--CCCcee
Q psy12614 156 --------GRILCTAWHSSGDYLVTGCAA-A-------------------VRVWDIHKGHAIHKMSLDKSSK--FSKNTA 205 (708)
Q Consensus 156 --------~~v~~~~~s~d~~~l~~~~~d-~-------------------i~iwd~~~~~~~~~~~~~~~~~--~~~~~~ 205 (708)
.....+++.|+...++.++.+ . |..+|..+|+.+..+....... +....+
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~ 301 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQ 301 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCC
Confidence 011246888888888887765 4 9999999999998887642100 000122
Q ss_pred EEEEEEccCCE----EEEEcCCCcEEEEeCCCCeeEEEeecccc------------C-----------------------
Q psy12614 206 VWCVAFCADFT----IITGDSGGFVRFWDGKTGVQWSDVKTHKK------------D----------------------- 246 (708)
Q Consensus 206 v~~~~~~~~~~----l~~~~~dg~i~~wd~~~~~~~~~~~~~~~------------~----------------------- 246 (708)
.....+..+|+ ++.++.+|.++++|..+|+.+...+.... +
T Consensus 302 ~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~ 381 (668)
T 1kv9_A 302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAH 381 (668)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSS
T ss_pred cEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCcccc
Confidence 22223334663 78889999999999999998754332110 0
Q ss_pred -eEEEEEeCCCCEEEEEe------------------------------------cCCeEEEEEccCCcccccCCCCCCCC
Q psy12614 247 -ILALTVSEDENYLYCAG------------------------------------VDPTVVCFQRTRKPQVCSTSGPEQGS 289 (708)
Q Consensus 247 -i~~~~~s~~~~~l~~~~------------------------------------~dg~i~iw~~~~~~~~~~~~g~~~~~ 289 (708)
-..++++|+..+++... .+|.|..||+.+ |+
T Consensus 382 ~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~t--------G~---- 449 (668)
T 1kv9_A 382 NWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVK--------QK---- 449 (668)
T ss_dssp CSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTT--------TE----
T ss_pred CCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCC--------Cc----
Confidence 01267888877776522 237788999988 65
Q ss_pred cceEEeEEEeccccceE--EEEEeCCEEEEEcCCCeEEEEeCCCCc-eeecCcc-CCCCceEEEEcCCcEEEE
Q psy12614 290 SVWVRSVNRVIHEGDVK--SLALHGNRLYSGGLDSYLSLSYYPPKT-LVKYPCT-LAQSTPVSLAKDIQHVLL 358 (708)
Q Consensus 290 ~~~~~~~~~~~~~~~v~--~l~~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~-~~~~~~~~~s~~~~~l~~ 358 (708)
..|. ...+ .... .+...+.+++.++.|+.++.||..++. +.++..+ ......+.+..+|+..++
T Consensus 450 ~~W~----~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva 517 (668)
T 1kv9_A 450 AAWK----VPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVA 517 (668)
T ss_dssp EEEE----EEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EEEE----ccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEE
Confidence 3332 2222 2222 233348899999999999999999877 3333311 122345666677775443
No 240
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.12 E-value=2.1e-05 Score=83.45 Aligned_cols=510 Identities=11% Similarity=0.020 Sum_probs=271.5
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEe-cCCCCCcEEEEEEe--CCEEE-EEcCCCcEEEEECCCCeEeEEEeecCCce
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFI-GDPLSNSIECLTWF--NDRLF-SGGLQGFVNEYDMRRLNIKSSTAVTSGTC 114 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~-~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~v 114 (708)
.+|+.+. .+.|+..++.+..... .+. ..- ..+.+|+|. ++.|+ +-..++.|..+++........+.......
T Consensus 7 ~~Ll~s~-~~~I~~i~l~~~~~~~-~~~~~~~--~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P 82 (628)
T 4a0p_A 7 AFLLFSR-RADIRRISLETNNNNV-AIPLTGV--KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP 82 (628)
T ss_dssp CEEEEEE-TTEEEEEESSCTTCEE-ECCCCSC--SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred cEEEEEe-CCcEEEEECCCCCcce-EEEcCCC--CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc
Confidence 3555554 4589999998765432 333 222 568899999 55555 44567899999987654433333323467
Q ss_pred EEEEEecCCCEEEEE-eCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec-C-C-eEEEEEcCCCceEE
Q psy12614 115 WCLSVHKKKRLLAAG-TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC-A-A-AVRVWDIHKGHAIH 190 (708)
Q Consensus 115 ~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~-~-d-~i~iwd~~~~~~~~ 190 (708)
..+++.+.+..|..+ ...+.|.+.++.+.... ..+...-.....+++.|....|+... . . .|...++.... ..
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~--~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~ 159 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ--VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RT 159 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSTTCE--EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CE
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE--EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eE
Confidence 789999876666554 44678999998766543 22223345578999998666666554 2 4 78888875433 33
Q ss_pred EEEecccCCCCCceeEEEEEEccCC-EEEEE-cCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEe-cCCe
Q psy12614 191 KMSLDKSSKFSKNTAVWCVAFCADF-TIITG-DSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG-VDPT 267 (708)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~-~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~ 267 (708)
.+... -.....+++.+++ +|..+ ...+.|..+|+..... ..+.........+++.. + .|+.+. ..+.
T Consensus 160 ~l~~~-------~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~-~ly~tD~~~~~ 229 (628)
T 4a0p_A 160 TLVPN-------VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-D-YIYWTDWSRRS 229 (628)
T ss_dssp EEECS-------CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-T-EEEEEETTTTE
T ss_pred EEECC-------CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-C-EEEEecCCCCE
Confidence 33322 4567899999965 65544 4567899999865433 33433344556788765 3 455544 4688
Q ss_pred EEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--C-CEEEE-E----cCCCeEEEEeCCCC-ceeecC
Q psy12614 268 VVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--G-NRLYS-G----GLDSYLSLSYYPPK-TLVKYP 338 (708)
Q Consensus 268 i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~-~~l~s-~----~~d~~i~iw~~~~~-~~~~~~ 338 (708)
|...|..+ |+ ....+.........+... . ..-.- + +.-..+++-..... .+.-..
T Consensus 230 I~~~dk~t--------g~--------~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~ 293 (628)
T 4a0p_A 230 IERANKTS--------GQ--------NRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPA 293 (628)
T ss_dssp EEEEETTT--------CC--------SCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECST
T ss_pred EEEEECCC--------CC--------ceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCC
Confidence 88888776 43 111111111122222211 0 00000 0 00001111111000 000000
Q ss_pred ccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEE
Q psy12614 339 CTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418 (708)
Q Consensus 339 ~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l 418 (708)
+.........+.+...+++.+....|+-..+.... .+ . ..+....-..+.+++|.+....|
T Consensus 294 g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~-----------------~~-~-~~l~~~~~~~~~~ld~d~~~~~i 354 (628)
T 4a0p_A 294 HYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQ-----------------SP-D-IILPIHSLRNVRAIDYDPLDKQL 354 (628)
T ss_dssp TCEECTTSSCEECCSSEEEEEETTEEEEECCCTTC-----------------CC-C-EECCCTTCSCEEEEEEETTTTEE
T ss_pred CcEecccCCcCccccceeeeeccceEEEEeccccc-----------------Cc-e-EEEEehhcCCceEEEEecCCCeE
Confidence 00000000011122345666666666655554321 00 0 11111233567889999877777
Q ss_pred EEEc--CCceEEEEEEecCCcceeEEeec-CCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCC
Q psy12614 419 AYST--ESCVRLHSLDLDGDKPQISRIKN-LPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYK 494 (708)
Q Consensus 419 ~~~~--d~~i~i~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~ 494 (708)
..++ .+.|+.++.+. .. ....+.. ..+......+..+++...++.|+.+..... |...+.. ++....+....
T Consensus 355 y~sD~~~~~I~r~~~~g--~~-~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~ 430 (628)
T 4a0p_A 355 YWIDSRQNMIRKAQEDG--SQ-GFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGE 430 (628)
T ss_dssp EEEETTTTEEEEEETTS--CS-CEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECT
T ss_pred EEEecCcceEEEEEcCC--CC-ceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCC
Confidence 7765 55666554432 11 1111100 000000123455999998888876665444 4444332 23333332211
Q ss_pred CCccCcceEEEEECCCCcEEEEEe-cCC--eEEEEECC-ceee-ecCCCCCCceEEEEcCCCCEEEEEec-CCcEEEEEc
Q psy12614 495 SNLMSDVISLVQMSECKQYIVCAD-RKS--HVVIWKNG-QHHA-SLPRYRKPSTAMAIHPTLSTLVTVYS-DHRIVEFDL 568 (708)
Q Consensus 495 ~~~~~~~i~~~~~s~~~~~l~~~~-~d~--~i~iw~~~-~~~~-~~~~~~~~v~~l~~s~d~~~l~~~~~-dg~i~vwd~ 568 (708)
......+++.|...+|+..+ ... .|...+++ +... .....-..++.|++.++++.|..+.. .+.|...++
T Consensus 431 ----l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~ 506 (628)
T 4a0p_A 431 ----QDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDL 506 (628)
T ss_dssp ----TCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ----CCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 34678999999544444443 333 57777776 2222 22333456799999998888887765 578999999
Q ss_pred CCCCCCchhhhhhccCchhhh-cCCCCeeEEEeCCCCCceEEEEc-CeeEEEEecC
Q psy12614 569 NRKAFTTFSRKLETNHPNEWL-SRQLPVLGIEFDPQDSSLIYLMD-DSALCVINKN 622 (708)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~s~~~~~l~~~~~-d~~i~~wd~~ 622 (708)
+..... .+. .......+|++.. ..|+.+.. ...|...|..
T Consensus 507 dG~~r~------------~~~~~~~~~P~glav~~--~~ly~tD~~~~~i~~~~k~ 548 (628)
T 4a0p_A 507 SGANRI------------VLEDSNILQPVGLTVFE--NWLYWIDKQQQMIEKIDMT 548 (628)
T ss_dssp TSCSCE------------EEECSSCSCEEEEEEET--TEEEEEETTTTEEEEEETT
T ss_pred CCCceE------------EEEcCCCCCcEEEEEEC--CEEEEEECCCCeEEEEECc
Confidence 764432 111 2233466777644 45555553 4566665554
No 241
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.11 E-value=2.3e-05 Score=83.12 Aligned_cols=403 Identities=8% Similarity=0.007 Sum_probs=225.4
Q ss_pred CCCcEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCCcEEEEECCC
Q psy12614 25 EPKVINCIACEPKSSRLAVSR-ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQGFVNEYDMRR 100 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~-~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~vwd~~~ 100 (708)
.-..+..++|++.+..|..+. ..+.|..+++.........+...- .....|++. ++.|+ +-...+.|.+.++..
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~--~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG 115 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL--LSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 115 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSC--SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCC--CCcCeEEEEecCCEEEEEeCCCCEEEEEECCC
Confidence 345678999999777777664 457888899876532222444433 578899998 55555 445678999999886
Q ss_pred CeEeEEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-- 176 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-- 176 (708)
......+...-.....|++.|.+.+|..... .+.|...+++..... ......-.....+++++++..|+.+...
T Consensus 116 ~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~--~l~~~~~~~P~Glald~~~~~LY~aD~~~~ 193 (619)
T 3s94_A 116 SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF--IIINSEIYWPNGLTLDYEEQKLYWADAKLN 193 (619)
T ss_dssp CSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE--EEECSSCSSEEEEEEETTTTEEEEEETTTC
T ss_pred CCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE--EEEeCCCCCCcEEEEEccCCEEEEEeCCCC
Confidence 5443333344456789999998766666543 466777777755443 2222234567899999988888777654
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEE-------
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILA------- 249 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~------- 249 (708)
.|...|+.. .....+.... ......+++..+.-+++-...+.|...|..+++....+.........
T Consensus 194 ~I~~~~~dG-~~~~~~~~~~------~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~ 266 (619)
T 3s94_A 194 FIHKSNLDG-TNRQAVVKGS------LPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQ 266 (619)
T ss_dssp CEEEESSSC-CEEC---------------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGG
T ss_pred eEEEecCCC-CccEEEEeCC------CCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccc
Confidence 899998864 3333332211 12234667766632444455778998888777544333211100111
Q ss_pred ------------------EEE-----------eCCC---------------CEEEEEecCCeEEEEEccCCcccccCCCC
Q psy12614 250 ------------------LTV-----------SEDE---------------NYLYCAGVDPTVVCFQRTRKPQVCSTSGP 285 (708)
Q Consensus 250 ------------------~~~-----------s~~~---------------~~l~~~~~dg~i~iw~~~~~~~~~~~~g~ 285 (708)
+++ +|.| .+|+.+ ..+.|+..++.. +.
T Consensus 267 ~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~-~~~~i~~i~l~~--------~~ 337 (619)
T 3s94_A 267 RQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLA-RRTDLRRISLDT--------PD 337 (619)
T ss_dssp GSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEE-ESSCEEEEESSS--------TT
T ss_pred cCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEE-cccceEEEecCC--------Cc
Confidence 111 1111 112222 123444444443 21
Q ss_pred CCCCcceEEeEEEe-ccccceEEEEEe--CCE-EEEEcCCCeEEEEeCCCCceeecC-ccCCCCceEEEEcCCcEEEEE-
Q psy12614 286 EQGSSVWVRSVNRV-IHEGDVKSLALH--GNR-LYSGGLDSYLSLSYYPPKTLVKYP-CTLAQSTPVSLAKDIQHVLLQ- 359 (708)
Q Consensus 286 ~~~~~~~~~~~~~~-~~~~~v~~l~~~--~~~-l~s~~~d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~~- 359 (708)
.. ...+. ..-..+.+++++ ++. +++-...+.|..+++++.....+. .....+..+++.+.++.|..+
T Consensus 338 ----~~---~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD 410 (619)
T 3s94_A 338 ----FT---DIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTD 410 (619)
T ss_dssp ----CC---CEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEE
T ss_pred ----cc---eeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEe
Confidence 00 00011 112346778887 444 445556788998988875433332 234567789999755555443
Q ss_pred -cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCc
Q psy12614 360 -YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDK 437 (708)
Q Consensus 360 -~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~ 437 (708)
..+.|.+.++.... ...+....-.....+++.|...+|..++ ...-+|+.....+..
T Consensus 411 ~~~~~I~v~~~~G~~---------------------~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~ 469 (619)
T 3s94_A 411 TGTDRIEVTRLNGTM---------------------RKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD 469 (619)
T ss_dssp TTTTEEEEEETTSCS---------------------CEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCCcEEEEeCCCCe---------------------EEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCc
Confidence 56788888877533 1112223445678999999755565544 222345554432222
Q ss_pred ceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecC
Q psy12614 438 PQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDL 481 (708)
Q Consensus 438 ~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~ 481 (708)
...- ...... ..+.+++++++..|+.+..... |+.++.
T Consensus 470 ~~~l----~~~~l~--~P~GlalD~~~~~LY~aD~~~~~I~~~~~ 508 (619)
T 3s94_A 470 RVVL----VNTSLG--WPNGLALDYDEGKIYWGDAKTDKIEVMNT 508 (619)
T ss_dssp CEEE----ECSSCS--CEEEEEEETTTTEEEEEETTTTEEEEEES
T ss_pred cEEE----EeCCCC--CCeeeEEcccCCEEEEEECCCCEEEEEec
Confidence 1111 111122 3344999998888888876655 766653
No 242
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.09 E-value=2.8e-05 Score=82.46 Aligned_cols=469 Identities=9% Similarity=-0.002 Sum_probs=242.5
Q ss_pred EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc-CCCcEEEEECCCCeEeE-EEeecCCceE
Q psy12614 40 RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG-LQGFVNEYDMRRLNIKS-STAVTSGTCW 115 (708)
Q Consensus 40 ~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~-~d~~i~vwd~~~~~~~~-~~~~~~~~v~ 115 (708)
+|.-+ ....|+..|+.........+...- ....+|+|+ ++.|+.+. ..+.|..++++...... .+...-....
T Consensus 11 ~~~~~-~~~~I~~i~~~~~~~~~~~~~~~~--~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~ 87 (619)
T 3s94_A 11 LLLYA-NRRDLRLVDATNGKENATIVVGGL--EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD 87 (619)
T ss_dssp CEEEE-CSSBEEEECCC---------CBCC--SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEE
T ss_pred eEEEe-ccccEEEEeCCCCcceEEEEEcCC--CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcC
Confidence 34444 345788988886531111233333 568899999 66666554 56889999987754322 2333235788
Q ss_pred EEEEecCCCEEEEE-eCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC--C-eEEEEEcCCCceEEE
Q psy12614 116 CLSVHKKKRLLAAG-TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA--A-AVRVWDIHKGHAIHK 191 (708)
Q Consensus 116 ~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~--d-~i~iwd~~~~~~~~~ 191 (708)
.+++.+.+..|+.+ ...+.|.+.+..+.... ..+...-.....|++.|.+.+|+.... . .|...++. |.....
T Consensus 88 GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~--~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d-G~~~~~ 164 (619)
T 3s94_A 88 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRK--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFI 164 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEE
T ss_pred eEEEEecCCEEEEEeCCCCEEEEEECCCCCEE--EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC-CCceEE
Confidence 99999976655554 45788999999876543 222233445678999997666665543 3 66666764 443333
Q ss_pred EEecccCCCCCceeEEEEEEccCC-EEE-EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEe-cCCeE
Q psy12614 192 MSLDKSSKFSKNTAVWCVAFCADF-TII-TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG-VDPTV 268 (708)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~~~~~-~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i 268 (708)
+... .-.....+++.+++ +|. +-...+.|...|+..........+.......+++..+ .|+.+. ..+.|
T Consensus 165 l~~~------~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V 236 (619)
T 3s94_A 165 IINS------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSI 236 (619)
T ss_dssp EECS------SCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSE
T ss_pred EEeC------CCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEE
Confidence 3321 14567899999864 654 4455678999998654332222212223346777655 555444 46788
Q ss_pred EEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe----CCEEEEE-----cCCCeEEEEeCCCC--ceeec
Q psy12614 269 VCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH----GNRLYSG-----GLDSYLSLSYYPPK--TLVKY 337 (708)
Q Consensus 269 ~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~l~s~-----~~d~~i~iw~~~~~--~~~~~ 337 (708)
...|..+ |+. ...+........++.+. ....... +.-..+++-..... .+.-.
T Consensus 237 ~~~d~~t--------g~~--------~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~ 300 (619)
T 3s94_A 237 LACNKYT--------GEG--------LREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACP 300 (619)
T ss_dssp EEEESSS--------CCC--------CEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECC
T ss_pred EEEECCC--------Ccc--------cEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCC
Confidence 8888877 431 11111111111122211 0000000 00001111111000 00000
Q ss_pred Cc---cCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCC
Q psy12614 338 PC---TLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSND 414 (708)
Q Consensus 338 ~~---~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 414 (708)
.+ ......+. .....+|+.+..+.|+..++..... ....+....-..+.+++|.+.
T Consensus 301 ~g~~l~~d~~~C~--~~~~~~Ll~~~~~~i~~i~l~~~~~-------------------~~~~~~~~~l~~~~~ld~d~~ 359 (619)
T 3s94_A 301 TGVKLLENGKTCK--DGATELLLLARRTDLRRISLDTPDF-------------------TDIVLQLEDIRHAIAIDYDPV 359 (619)
T ss_dssp TTCCBCTTSSCBC--SSCSEEEEEEESSCEEEEESSSTTC-------------------CCEECCCSCCSSEEEEEEETT
T ss_pred chheecccCcccC--CCCceEEEEEcccceEEEecCCCcc-------------------ceeEEeccccCccEEEEEEcC
Confidence 00 00000111 1123456666677777777765430 001111122345778999987
Q ss_pred CcEEEEEc--CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEec
Q psy12614 415 GKYVAYST--ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVD 491 (708)
Q Consensus 415 g~~l~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~ 491 (708)
+..|..++ .+.|+.++++. .... .+ +..... ....+++.+.+..|+.+..... |...+... .....+.
T Consensus 360 ~~~ly~sD~~~~~I~r~~~~g--~~~~--~v--~~~~~~--~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G-~~~~~l~ 430 (619)
T 3s94_A 360 EGYIYWTDDEVRAIRRSFIDG--SGSQ--FV--VTAQIA--HPDGIAVDWVARNLYWTDTGTDRIEVTRLNG-TMRKILI 430 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTS--CSCE--EE--ECSSCS--CCCEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEE
T ss_pred CCeEEEEeCCCCeEEEEEcCC--CccE--EE--EECCCC--CcCceEEecccCcEEEEeCCCCcEEEEeCCC-CeEEEEE
Confidence 66676654 56666655543 2211 11 111111 2333899987777776655444 55443321 1122222
Q ss_pred CCCCCccCcceEEEEECCCCcEEEEEec--CCeEEEEECC-ceee-ecCCCCCCceEEEEcCCCCEEEEEec-CCcEEEE
Q psy12614 492 PYKSNLMSDVISLVQMSECKQYIVCADR--KSHVVIWKNG-QHHA-SLPRYRKPSTAMAIHPTLSTLVTVYS-DHRIVEF 566 (708)
Q Consensus 492 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~--d~~i~iw~~~-~~~~-~~~~~~~~v~~l~~s~d~~~l~~~~~-dg~i~vw 566 (708)
.. + -.....+++.|...+|+.++. ...|...+++ +... .....-..++.|++.++++.|..+.. .+.|..+
T Consensus 431 ~~-~---l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~ 506 (619)
T 3s94_A 431 SE-D---LEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVM 506 (619)
T ss_dssp CT-T---CCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EC-C---CCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEE
Confidence 11 1 346789999997556665542 3677777777 2222 22333467889999998888887765 4679999
Q ss_pred EcCCCC
Q psy12614 567 DLNRKA 572 (708)
Q Consensus 567 d~~~~~ 572 (708)
+++...
T Consensus 507 ~~dG~~ 512 (619)
T 3s94_A 507 NTDGTG 512 (619)
T ss_dssp ESSSCC
T ss_pred ecCCCc
Confidence 987654
No 243
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.09 E-value=6.5e-08 Score=94.97 Aligned_cols=229 Identities=13% Similarity=0.062 Sum_probs=147.7
Q ss_pred Ec--CCCCEEEEE-eCCCcEEEEeCCCC--C-eEEEEEe------cCCCCCcEEEEEEe-CCEEEEEcCC------CcEE
Q psy12614 34 CE--PKSSRLAVS-RADQSIEIWDISET--P-HVDRVFI------GDPLSNSIECLTWF-NDRLFSGGLQ------GFVN 94 (708)
Q Consensus 34 ~s--~~~~~la~~-~~dg~v~iwd~~~~--~-~~~~~~~------~h~~~~~v~~l~~~-~~~l~s~~~d------~~i~ 94 (708)
++ +++++|++. ..++.|.|+|+.+. + .+.++++ ... ...-..+..+ +..++++..+ |.|.
T Consensus 89 ~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g-~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 89 GKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSG-YSRLHTVHCGPDAIYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHC-EEEEEEEEECSSCEEEEEEEETTSCSCCEEE
T ss_pred cCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccC-CCcccceeECCCeEEEEcCCCcCCCCCCeEE
Confidence 37 888887765 55788999999754 1 2223552 111 0234455566 3366666555 7899
Q ss_pred EEECCCCeEeEEEeecCC---ceEEEEEecCCCEEEEEe-------------------CCCcEEEEEccCCcEEEEEecc
Q psy12614 95 EYDMRRLNIKSSTAVTSG---TCWCLSVHKKKRLLAAGT-------------------EQGHINLFQISDEGLLYEKLLD 152 (708)
Q Consensus 95 vwd~~~~~~~~~~~~~~~---~v~~~~~s~~~~~la~~~-------------------~d~~i~iwd~~~~~~~~~~~~~ 152 (708)
+.|.++.+.+.++....+ --..+.|+|+++.+++.. ...+|.+||+.+++......+.
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 999999999988873322 233578899999888864 3688999999998766333332
Q ss_pred cccccEEEEEE--CCCCCEEEEecC-----C--eEEEEEcCCCceEE--EEEecccCC----------CCC-ceeEEEEE
Q psy12614 153 RQQGRILCTAW--HSSGDYLVTGCA-----A--AVRVWDIHKGHAIH--KMSLDKSSK----------FSK-NTAVWCVA 210 (708)
Q Consensus 153 ~~~~~v~~~~~--s~d~~~l~~~~~-----d--~i~iwd~~~~~~~~--~~~~~~~~~----------~~~-~~~v~~~~ 210 (708)
........+.| +|+++++++++. . +|.+|....++... .+....... |.. ......+.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 12234455655 999999988775 3 78877766554221 111111000 000 13467899
Q ss_pred EccCCE--EEEEcCCCcEEEEeCCC---CeeEEEeeccc--------------cCeEEEEEeCCCCEEEEEe
Q psy12614 211 FCADFT--IITGDSGGFVRFWDGKT---GVQWSDVKTHK--------------KDILALTVSEDENYLYCAG 263 (708)
Q Consensus 211 ~~~~~~--l~~~~~dg~i~~wd~~~---~~~~~~~~~~~--------------~~i~~~~~s~~~~~l~~~~ 263 (708)
+++||+ +++.-..+.|.+||+.. .+.+..+.... +.-..++++|||++|+++.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999996 44555678999999853 35555554321 1357899999999999987
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.07 E-value=8.8e-07 Score=83.90 Aligned_cols=245 Identities=8% Similarity=-0.033 Sum_probs=152.1
Q ss_pred CEEEEEcCCCcEEEEECCCCeEe-----EEEeecCCceEEEEEecCCCEEEEEe-CCCcEEEEEccCCcEEEEEeccccc
Q psy12614 82 DRLFSGGLQGFVNEYDMRRLNIK-----SSTAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQISDEGLLYEKLLDRQQ 155 (708)
Q Consensus 82 ~~l~s~~~d~~i~vwd~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~~ 155 (708)
.+|+.+.. +.|+.+++...... ..+......+..+++++++..|..+. ..+.|..++..++... .......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT--TIIRQDL 78 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE--EEECTTC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE--EEEECCC
Confidence 34555443 47888888765421 12222234678999999777666554 4688999999876543 2232223
Q ss_pred ccEEEEEECCCCCEEEEecC-C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC-CEEEEEcC---CCcEEEE
Q psy12614 156 GRILCTAWHSSGDYLVTGCA-A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD-FTIITGDS---GGFVRFW 229 (708)
Q Consensus 156 ~~v~~~~~s~d~~~l~~~~~-d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~---dg~i~~w 229 (708)
.....++++|++..|+.+.. . .|.++++.... ...+... .......+++.|+ +.+..+.. .+.|..+
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~------~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~ 151 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFDT------GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETS 151 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECS------SCSSEEEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEEC------CCCCccEEEEeeCCCEEEEEECCCCCcEEEEE
Confidence 46789999998776666554 4 89999986433 2223211 1245689999995 56555543 4688888
Q ss_pred eCCCCeeEEEee-ccccCeEEEEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEE
Q psy12614 230 DGKTGVQWSDVK-THKKDILALTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS 307 (708)
Q Consensus 230 d~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 307 (708)
++. +.....+. ........+++++++..|+.+.. .+.|..++... +. ...... .......
T Consensus 152 ~~d-g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g--------~~--------~~~~~~-~~~~P~g 213 (267)
T 1npe_A 152 HMD-GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ--------PG--------RRKVLE-GLQYPFA 213 (267)
T ss_dssp ETT-SCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE--------EE--------EEEEEE-CCCSEEE
T ss_pred ecC-CCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC--------Cc--------eEEEec-CCCCceE
Confidence 875 33323322 23346788999998877766654 57899999876 21 111112 2233456
Q ss_pred EEEeCC-EEEEEcCCCeEEEEeCCCCc-eeecCc-cCCCCceEEEEcCCc
Q psy12614 308 LALHGN-RLYSGGLDSYLSLSYYPPKT-LVKYPC-TLAQSTPVSLAKDIQ 354 (708)
Q Consensus 308 l~~~~~-~l~s~~~d~~i~iw~~~~~~-~~~~~~-~~~~~~~~~~s~~~~ 354 (708)
++..++ .+++....+.|..++..+.. +..+.. ..+.+..+++.|++.
T Consensus 214 i~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 214 VTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 777744 44555566899999998765 444431 123467888888764
No 245
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.07 E-value=1.4e-08 Score=99.62 Aligned_cols=260 Identities=9% Similarity=-0.058 Sum_probs=164.2
Q ss_pred cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc----------CCCcEEEEECCCCeEeEEEeec------
Q psy12614 49 SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG----------LQGFVNEYDMRRLNIKSSTAVT------ 110 (708)
Q Consensus 49 ~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~------ 110 (708)
.|.+.|..+++.+. .+.... .+ .++++ +++++++. .++.|.+||..+++.+.++...
T Consensus 47 ~vsvID~~t~~v~~-~i~vG~--~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~ 121 (368)
T 1mda_H 47 ENWVSCAGCGVTLG-HSLGAF--LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFS 121 (368)
T ss_dssp EEEEEETTTTEEEE-EEEECT--TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCC
T ss_pred eEEEEECCCCeEEE-EEeCCC--CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccc
Confidence 78899999999988 454434 45 79999 78888775 4789999999999999998754
Q ss_pred -CCceEEEEEecCCCEEEEEeC--CCcEEE--EEccCCcEEEEEecccccccEEEEEECCCCC-EEEEecCC-eEEEEEc
Q psy12614 111 -SGTCWCLSVHKKKRLLAAGTE--QGHINL--FQISDEGLLYEKLLDRQQGRILCTAWHSSGD-YLVTGCAA-AVRVWDI 183 (708)
Q Consensus 111 -~~~v~~~~~s~~~~~la~~~~--d~~i~i--wd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-~l~~~~~d-~i~iwd~ 183 (708)
......++|+|||++++++.. +..+.+ +|..+ . ..+.- .+. ..+.|+++ .+++.+.| .+.+.|+
T Consensus 122 ~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v--~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd~ 192 (368)
T 1mda_H 122 VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---D--QLTKS-ASC---FHIHPGAAATHYLGSCPASLAASDL 192 (368)
T ss_dssp BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---E--EEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEEC
T ss_pred cCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---c--eEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEEC
Confidence 134668999999999998864 467888 88877 2 22211 111 11234443 33444455 6667777
Q ss_pred CC-----CceEEE----EEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCe--eEEEeec----------
Q psy12614 184 HK-----GHAIHK----MSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGV--QWSDVKT---------- 242 (708)
Q Consensus 184 ~~-----~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~--~~~~~~~---------- 242 (708)
.+ ++.... +..+ ..+. ++..++.++..+. +.|.+.|..++. .+..+..
T Consensus 193 ~~~~~~~~~v~~~~t~~i~vg-------~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~ 261 (368)
T 1mda_H 193 AAAPAAAGIVGAQCTGAQNCS-------SQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNF 261 (368)
T ss_dssp CSSCCCCEECCCCSCTTSCBC-------SCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTE
T ss_pred ccccccCCeEEEEeeeeeeCC-------CCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccccc
Confidence 65 332211 1111 2232 3444446666666 999999986542 2322211
Q ss_pred cccCeEEEEEeCCCCEEEEEec-C--------CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--
Q psy12614 243 HKKDILALTVSEDENYLYCAGV-D--------PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-- 311 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~~-d--------g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-- 311 (708)
.......++++||+++++++.. . +.+.++|..+ .+ ....+... .....++++
T Consensus 262 ~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t--------~~--------vv~~i~vg-~~p~gi~~s~D 324 (368)
T 1mda_H 262 RSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV--------GQ--------TSGPISNG-HDSDAIIAAQD 324 (368)
T ss_dssp EECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS--------CC--------EEECCEEE-EEECEEEECCS
T ss_pred ccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCC--------Ce--------EEEEEECC-CCcceEEECCC
Confidence 1112222789999999987643 2 3566999998 54 33333322 257788888
Q ss_pred CC-EEEEEc-CCCeEEEEeCCCCceeecCccCCCCceEEEE
Q psy12614 312 GN-RLYSGG-LDSYLSLSYYPPKTLVKYPCTLAQSTPVSLA 350 (708)
Q Consensus 312 ~~-~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s 350 (708)
++ .+++.. .++.|.++|+.+.+..........+..+++.
T Consensus 325 g~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~ 365 (368)
T 1mda_H 325 GASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQ 365 (368)
T ss_dssp SSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECC
T ss_pred CCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEee
Confidence 55 566666 5999999999998754433233444455443
No 246
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.06 E-value=4.8e-07 Score=95.33 Aligned_cols=300 Identities=14% Similarity=0.111 Sum_probs=186.2
Q ss_pred CCEEEEEeC-CCcEEEEeC-CCCCeEEEEEecCCCCCc----------EEEEEEeCCEEEEEcCCCcEEEEECCCCeEeE
Q psy12614 38 SSRLAVSRA-DQSIEIWDI-SETPHVDRVFIGDPLSNS----------IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKS 105 (708)
Q Consensus 38 ~~~la~~~~-dg~v~iwd~-~~~~~~~~~~~~h~~~~~----------v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~ 105 (708)
+..|.+++. ++.|.-+|. .+|+.+= ...... ... -..++..+..++.++.|+.|..+|..+|+.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVW-QHKPKQ-DASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEE-EECCCC-CGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEE-EEcCCC-CccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 556777777 889999999 8998764 222111 000 12344558899999999999999999999988
Q ss_pred EEeecC----CceEE-EEEecCCCEEEEEeC------CCcEEEEEccCCcEEEEEecccccc------------------
Q psy12614 106 STAVTS----GTCWC-LSVHKKKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQQG------------------ 156 (708)
Q Consensus 106 ~~~~~~----~~v~~-~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~------------------ 156 (708)
...... ..+.+ .... + ..+++++. ++.|..+|..+|+.+..........
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~-~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVA-K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEE-T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EecCCCCCccceeccCCEEE-C-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 765322 01211 1111 3 45566554 7899999999999886444322110
Q ss_pred ------------------cEEEEEECCCCCEEEEecCC-----------------eEEEEEcCCCceEEEEEecccCC--
Q psy12614 157 ------------------RILCTAWHSSGDYLVTGCAA-----------------AVRVWDIHKGHAIHKMSLDKSSK-- 199 (708)
Q Consensus 157 ------------------~v~~~~~s~d~~~l~~~~~d-----------------~i~iwd~~~~~~~~~~~~~~~~~-- 199 (708)
....+++.++...++.+..+ .|..+|..+|+.+..+.......
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d 297 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD 297 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence 00135566766677665531 49999999999998887542100
Q ss_pred C-CCceeEEEEEEccCCE----EEEEcCCCcEEEEeCCCCeeEEEeeccc-------------cCe--------------
Q psy12614 200 F-SKNTAVWCVAFCADFT----IITGDSGGFVRFWDGKTGVQWSDVKTHK-------------KDI-------------- 247 (708)
Q Consensus 200 ~-~~~~~v~~~~~~~~~~----l~~~~~dg~i~~wd~~~~~~~~~~~~~~-------------~~i-------------- 247 (708)
+ ....++. +....+|+ ++.++.+|.++++|..+|+.+....... .++
T Consensus 298 ~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~ 376 (571)
T 2ad6_A 298 FAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT 376 (571)
T ss_dssp CCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred cccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence 0 0012221 22234673 5678889999999999999877654221 111
Q ss_pred ------------EEEEEeCCCCEEEEEec-------------------------------------CCeEEEEEccCCcc
Q psy12614 248 ------------LALTVSEDENYLYCAGV-------------------------------------DPTVVCFQRTRKPQ 278 (708)
Q Consensus 248 ------------~~~~~s~~~~~l~~~~~-------------------------------------dg~i~iw~~~~~~~ 278 (708)
..++++|+..++++... +|.|..||..+
T Consensus 377 ~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~t--- 453 (571)
T 2ad6_A 377 NICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTT--- 453 (571)
T ss_dssp EESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTT---
T ss_pred EECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCC---
Confidence 24678888888877643 46788888888
Q ss_pred cccCCCCCCCCcceEEeEEEeccccceEEE--EEeCCEEEEEcCCCeEEEEeCCCCcee-ecCc-cCCCCceEEEEcCCc
Q psy12614 279 VCSTSGPEQGSSVWVRSVNRVIHEGDVKSL--ALHGNRLYSGGLDSYLSLSYYPPKTLV-KYPC-TLAQSTPVSLAKDIQ 354 (708)
Q Consensus 279 ~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l--~~~~~~l~s~~~d~~i~iw~~~~~~~~-~~~~-~~~~~~~~~~s~~~~ 354 (708)
|+ ..|. ... ...+.+. ...+..++.++.|+.++.+|..+++.. ++.. .......+.+..+|+
T Consensus 454 -----G~----~~W~----~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~ 519 (571)
T 2ad6_A 454 -----GK----AKWT----KWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGK 519 (571)
T ss_dssp -----CC----EEEE----EEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred -----CC----EEEE----ecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCE
Confidence 65 3333 211 1222222 223788888999999999999887733 3321 112234455667887
Q ss_pred EEEEE
Q psy12614 355 HVLLQ 359 (708)
Q Consensus 355 ~l~~~ 359 (708)
.++..
T Consensus 520 ~yv~~ 524 (571)
T 2ad6_A 520 QYIGS 524 (571)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
No 247
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.03 E-value=8.3e-11 Score=117.33 Aligned_cols=178 Identities=15% Similarity=0.103 Sum_probs=105.5
Q ss_pred eCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccc-ccE
Q psy12614 80 FNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQ-GRI 158 (708)
Q Consensus 80 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~v 158 (708)
.++.+++++.||.|..||..+|+.+..+.. +.+.+..+..++..+++++.|+.|+.||.++++... .+..+. ..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w--~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT--KLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSE--ECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee--eeeccCcccc
Confidence 378999999999999999999999988876 556666667788888888899999999998887653 222221 111
Q ss_pred E-EEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCe
Q psy12614 159 L-CTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGV 235 (708)
Q Consensus 159 ~-~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~ 235 (708)
. +..+. ++..|++++.+ .+..||..+|+.+..+... . ...++|++ .+++++.++.|+.||.++|+
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~-------~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA-------F----ADSLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC---------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCC-------C----cccccccCCEEEEEecCCEEEEEECCCCC
Confidence 0 11111 34567778878 9999999999998777543 1 12344555 58888899999999999998
Q ss_pred eEEEeeccccCeEEEEEeCCC---CEEEEEecCCeEEEEEccC
Q psy12614 236 QWSDVKTHKKDILALTVSEDE---NYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 236 ~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~i~iw~~~~ 275 (708)
.+..+..+. ....+++++. ..+++++.+|.++.||..+
T Consensus 152 ~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~t 192 (369)
T 2hz6_A 152 LRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSES 192 (369)
T ss_dssp CCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTT
T ss_pred EEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCC
Confidence 765554221 1233344432 5677888999999999998
No 248
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.01 E-value=8.9e-05 Score=81.84 Aligned_cols=519 Identities=11% Similarity=0.061 Sum_probs=283.9
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeE
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKS 105 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~ 105 (708)
...|.++....+| .|-+|+.+| +..||..+..... ...... ..|.++......|..++.+ -|..+|..+++...
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~-~~~~~~--~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~ 135 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQ-PETDFP--TDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTS 135 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECC-CSCCCC--SCEEEEEEETTEEEEEETT-EEEEEETTTCCEEE
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEEC-cccCCC--ceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEE
Confidence 3568998888776 455666665 8899998765432 111112 4577776565567777666 68889987765432
Q ss_pred EEe----ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccc----cccEEEEEECCCCCEEEEecCCe
Q psy12614 106 STA----VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQ----QGRILCTAWHSSGDYLVTGCAAA 177 (708)
Q Consensus 106 ~~~----~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~v~~~~~s~d~~~l~~~~~d~ 177 (708)
... .....|.++....+|.+.+ |+.+ -|..++..+++... ...... ...|.++...+++..|..++.+.
T Consensus 136 ~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~G 212 (758)
T 3ott_A 136 FDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGY 212 (758)
T ss_dssp ECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEE
T ss_pred eccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEECCC
Confidence 201 1235688888888887655 4554 47788887776532 111111 23488888877776555555347
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEee-------ccccCeEEE
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK-------THKKDILAL 250 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~-------~~~~~i~~~ 250 (708)
+..+|..+++........ ...|.++...++|.+..|+. +-+.+++..+++...... -....|.++
T Consensus 213 l~~~~~~~~~~~~~~~l~-------~~~i~~i~~d~~g~lWigT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i 284 (758)
T 3ott_A 213 LFQYFPSTGQIKQTEAFH-------NNSIKSLALDGNGDLLAGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNI 284 (758)
T ss_dssp EEEEETTTTEEEEEEEEE-------EEEEEEEEECTTCCEEEEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEE
T ss_pred CeEEcCCCCeEEeccCCC-------CCeEEEEEEcCCCCEEEEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEE
Confidence 888998776543322221 45688898888888777775 458889887664432211 123458888
Q ss_pred EEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe-----ccccceEEEEEe-CCEEEEEcCCCeE
Q psy12614 251 TVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-----IHEGDVKSLALH-GNRLYSGGLDSYL 324 (708)
Q Consensus 251 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~v~~l~~~-~~~l~s~~~d~~i 324 (708)
....+|+.- .|+..| +.++.... . + ...... .....|.++... ...|..|+.+| +
T Consensus 285 ~~D~~g~lW-iGT~~G-l~~~~~~~---------~------~-~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~G-l 345 (758)
T 3ott_A 285 FADQEHNIW-LGTDYG-ISLSRYNS---------A------L-QFIPISQITGTGDGNQFYSLFRDSKGFYWFGGANG-L 345 (758)
T ss_dssp EECTTCCEE-EEESSS-EEEECCCC----------------C-EEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETTE-E
T ss_pred EEcCCCCEE-EEeCCc-ccccccCC---------c------e-eEEecccCCCCCCCceEEEEEEcCCCCEEEeeCCc-c
Confidence 888877644 455556 54443222 0 0 000000 112457787777 55555666554 5
Q ss_pred EEEeCCCCc---eeecC-----ccCC--CCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceE
Q psy12614 325 SLSYYPPKT---LVKYP-----CTLA--QSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRL 394 (708)
Q Consensus 325 ~iw~~~~~~---~~~~~-----~~~~--~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (708)
..++..+.. ...+. .... .+.++....+|++-+.. ++.+..|+..++. ..
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt-~~GL~~~~~~~~~-------------------~~ 405 (758)
T 3ott_A 346 IRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT-DGSINRYDYATRQ-------------------FI 405 (758)
T ss_dssp EEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE-TTEEEEEETTTTE-------------------EE
T ss_pred eeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe-CCcHhhcCcCCCc-------------------EE
Confidence 556554421 11111 0111 22445556677776665 5688888876643 11
Q ss_pred EEEEEec----CCCceEEEEeCCCCcEEEEEcCCceEEEEEEec---CCcceeE---EeecCCcccccceeEEEEEecCC
Q psy12614 395 IVKMSAV----NNATIRCSVVSNDGKYVAYSTESCVRLHSLDLD---GDKPQIS---RIKNLPAPLFKSIFTHVLISADS 464 (708)
Q Consensus 395 ~~~~~~~----~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~---~~~~~~~---~~~~~~~~~~~~~i~~~~~s~d~ 464 (708)
....... ....|.++...++|.+.+....+.+.+++.... ... .+. ... .........|.++...++|
T Consensus 406 ~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~-~~~~~~~~~-~~~~l~~~~i~~i~~d~~g 483 (758)
T 3ott_A 406 HYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSG-QYIAEQNYS-VHNGLSGMFINQIIPDNEG 483 (758)
T ss_dssp EEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSS-EEECSEEEC-GGGTCSCSCEEEEEECTTS
T ss_pred EeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCc-ceecccccc-cccccccceeeeEEEcCCC
Confidence 1111111 234578888888887666555666777774420 001 111 100 0111112347778888888
Q ss_pred CeEEEEecCCcEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceee-ec--CCC-CC
Q psy12614 465 TLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA-SL--PRY-RK 540 (708)
Q Consensus 465 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~--~~~-~~ 540 (708)
.+.+.++..+.|+.++..+.+.. .+.. .+......+.++....+|.+.+.. .. -+..|+..+... .+ .+. ..
T Consensus 484 ~lWi~~~t~~Gl~~~d~~~~~~~-~~~~-~~~~~~~~~~~i~~d~~g~lWigt-~~-Gl~~~~~~~~~~~~~~~~gl~~~ 559 (758)
T 3ott_A 484 NVWVLLYNNKGIDKINPRTREVT-KLFA-DELTGEKSPNYLLCDEDGLLWVGF-HG-GVMRINPKDESQQSISFGSFSNN 559 (758)
T ss_dssp CEEEEETTCSSEEEEETTTTEEE-EECT-TTSCGGGCEEEEEECTTSCEEEEE-TT-EEEEECC--CCCCBCCCCC---C
T ss_pred CEEEEccCCCCcEEEeCCCCceE-EecC-CCcCCCcccceEEECCCCCEEEEe-cC-ceEEEecCCCceEEecccCCCcc
Confidence 87663333333555544332322 2321 111003467888888888876654 44 477787663222 22 111 24
Q ss_pred CceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEe
Q psy12614 541 PSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVIN 620 (708)
Q Consensus 541 ~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd 620 (708)
.|.++... +|+ |-.++.+| |..||..+.+..... + ....+....+......|..++.+|- ..++
T Consensus 560 ~i~~i~~~-~g~-lWi~t~~G-l~~~~~~~~~~~~~~------~------~~~~~~~~~~~~~~G~l~fG~~~Gl-~~f~ 623 (758)
T 3ott_A 560 EILSMTCV-KNS-IWVSTTNG-LWIIDRKTMDARQQN------M------TNKRFTSLLFDPKEDCVYLGGADGF-GISH 623 (758)
T ss_dssp CEEEEEEE-TTE-EEEEESSC-EEEEETTTCCEEEC--------------CCCCCSEEEEETTTTEEEEECBSEE-EEEE
T ss_pred ceEEEEEC-CCC-EEEECCCC-eEEEcCCCceeEEec------C------CCCceeeeEEECCCCcEEEecCCce-EEEC
Confidence 57777764 554 55566666 888898876644110 1 1122333444433344777777885 4455
Q ss_pred cC
Q psy12614 621 KN 622 (708)
Q Consensus 621 ~~ 622 (708)
..
T Consensus 624 p~ 625 (758)
T 3ott_A 624 SN 625 (758)
T ss_dssp C-
T ss_pred hh
Confidence 54
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.99 E-value=1.4e-08 Score=103.43 Aligned_cols=215 Identities=10% Similarity=0.052 Sum_probs=153.3
Q ss_pred CCCCEEEEEeC-CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEc------------------CCCc
Q psy12614 36 PKSSRLAVSRA-DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGG------------------LQGF 92 (708)
Q Consensus 36 ~~~~~la~~~~-dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~------------------~d~~ 92 (708)
+||++|.+... ++.|.+.|+.+.+... .+.-.. ...+..+++. ++++++++ .++.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~-ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDA-ILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEE-EEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEee-EEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 38999888765 5569999999988765 333221 2568899983 88888874 3568
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCC--------------------------------------c
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG--------------------------------------H 134 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~--------------------------------------~ 134 (708)
+.+.|.++.+...++..-. ....++++|||+++++.+.+. .
T Consensus 177 vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 9999999999888887533 467789999999999888653 3
Q ss_pred EEEEEccC--CcE-EEEEecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCCc------------eEEEEEeccc
Q psy12614 135 INLFQISD--EGL-LYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGH------------AIHKMSLDKS 197 (708)
Q Consensus 135 i~iwd~~~--~~~-~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~------------~~~~~~~~~~ 197 (708)
|.+.|..+ ++. + ..+. -.....++.++|||+++++++.. +|.++|+.+.+ ....+..
T Consensus 256 V~VID~~~~~~~~~~--~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v--- 329 (595)
T 1fwx_A 256 VKVVDGRKEASSLFT--RYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL--- 329 (595)
T ss_dssp EEEEECSGGGCCSSE--EEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC---
T ss_pred EEEEeCcccCCceeE--EEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC---
Confidence 55556554 322 1 1111 12235678999999999888765 99999998653 2333332
Q ss_pred CCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCC----------CeeEEEeeccccCe-----EEEEEeCCCCEEEE
Q psy12614 198 SKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKT----------GVQWSDVKTHKKDI-----LALTVSEDENYLYC 261 (708)
Q Consensus 198 ~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~----------~~~~~~~~~~~~~i-----~~~~~s~~~~~l~~ 261 (708)
......++|+|+|. +++...+++|.+||+.+ .+.+.++..|..+- ..+.++|||++|++
T Consensus 330 -----G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~ 404 (595)
T 1fwx_A 330 -----GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVC 404 (595)
T ss_dssp -----CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEE
T ss_pred -----CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEE
Confidence 35578999999996 56777899999999877 55677776554321 22356899999998
Q ss_pred Eec
Q psy12614 262 AGV 264 (708)
Q Consensus 262 ~~~ 264 (708)
+..
T Consensus 405 ~Nk 407 (595)
T 1fwx_A 405 LSK 407 (595)
T ss_dssp EES
T ss_pred cCC
Confidence 764
No 250
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.97 E-value=1.1e-06 Score=83.32 Aligned_cols=217 Identities=11% Similarity=-0.025 Sum_probs=142.8
Q ss_pred CcEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEE-cCCCcEEEEECCCCe
Q psy12614 27 KVINCIACEPKSSRLAVSR-ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSG-GLQGFVNEYDMRRLN 102 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~-~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~-~~d~~i~vwd~~~~~ 102 (708)
..+..++++|++..|..+. .++.|..++...+.... .+.... .....+++. ++.|+.+ ...+.|.+++++...
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~-~~~~~~--~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 112 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT-IIRQDL--GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ 112 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE-EECTTC--CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEE-EEECCC--CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC
Confidence 3467999999776666554 56799999998765432 443333 578999998 5555544 567899999987543
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeC---CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--e
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTE---QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--A 177 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~ 177 (708)
..............++++|++..|..+.. .+.|..+++...... ............++++|++..|+.+... .
T Consensus 113 ~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~--~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~ 190 (267)
T 1npe_A 113 RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR--ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (267)
T ss_dssp CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE--EEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE--EEEECCCCCCcEEEEcCCCCEEEEEECCCCE
Confidence 32222222256789999997776665554 368888888754432 1111223457899999998877666554 8
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccc-cCeEEEEEeCC
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHK-KDILALTVSED 255 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~-~~i~~~~~s~~ 255 (708)
|.++|........... . ......++.. ++. +++....+.|..+|..+++.+..+.... .....+++.|+
T Consensus 191 I~~~~~~g~~~~~~~~-~-------~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 191 AECLNPAQPGRRKVLE-G-------LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp EEEEETTEEEEEEEEE-C-------CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred EEEEecCCCceEEEec-C-------CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCc
Confidence 9999987543332222 1 2233566655 455 4455567899999999999888876432 24678888887
Q ss_pred CC
Q psy12614 256 EN 257 (708)
Q Consensus 256 ~~ 257 (708)
+.
T Consensus 262 ~~ 263 (267)
T 1npe_A 262 QC 263 (267)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.96 E-value=1.9e-07 Score=84.80 Aligned_cols=199 Identities=11% Similarity=0.101 Sum_probs=133.7
Q ss_pred eeeeeeeccCCCC--cEEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEc-C
Q psy12614 15 GVHNIKFYAPEPK--VINCIACEPKSSRLAVSRADQ--SIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG-L 89 (708)
Q Consensus 15 ~~~~~~~~~~h~~--~v~~~~~s~~~~~la~~~~dg--~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~-~ 89 (708)
..+-++.+ .|.. -...+.|+ ++.+..+.+.+| .|+++|+.+++.+...-.+.. ---..++..++.|..+. .
T Consensus 30 ~~~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~--~FgeGit~~g~~ly~ltw~ 105 (262)
T 3nol_A 30 DYQIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR--YFGEGISDWKDKIVGLTWK 105 (262)
T ss_dssp EEEEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT--CCEEEEEEETTEEEEEESS
T ss_pred ceEEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc--cceeEEEEeCCEEEEEEee
Confidence 33344444 3443 35889998 666666666655 899999999998874332222 23455777766666554 6
Q ss_pred CCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccc---ccEEEEEECCC
Q psy12614 90 QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQ---GRILCTAWHSS 166 (708)
Q Consensus 90 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~s~d 166 (708)
++.+.++|.++.+.+.++.... ....+++|++.|+....++.|.++|..+.+........... ..++.+.|. +
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~ 181 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-D 181 (262)
T ss_dssp SSEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-C
Confidence 8999999999999999888533 22345567888877766788999999998877433332222 334567776 6
Q ss_pred CCEEEEecCC-eEEEEEcCCCceEEEEEecccCC-----CCCceeEEEEEEccCC-EEEEEc
Q psy12614 167 GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSK-----FSKNTAVWCVAFCADF-TIITGD 221 (708)
Q Consensus 167 ~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~-~l~~~~ 221 (708)
|+..+..-.+ .|.+.|..+|+.+..+....-.. .......+.+||+|++ +|++.+
T Consensus 182 G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 182 GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 7655544445 99999999999999998742100 0113467899999987 444444
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.94 E-value=3.6e-07 Score=82.91 Aligned_cols=188 Identities=10% Similarity=0.005 Sum_probs=131.3
Q ss_pred cCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEE-EeCCCcEEEEEccCCc
Q psy12614 67 GDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAA-GTEQGHINLFQISDEG 144 (708)
Q Consensus 67 ~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~~~ 144 (708)
.|....-...|.|+ +...++.+.+|.|+++|+++++.+..+ - ..........++++.|.. .-.++.+.+||.++.+
T Consensus 50 phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 50 PHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp ECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTE
T ss_pred cCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCc
Confidence 44423556899999 656667788899999999999988887 3 334444333444555544 4468999999999999
Q ss_pred EEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE-EEcC
Q psy12614 145 LLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-TGDS 222 (708)
Q Consensus 145 ~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~ 222 (708)
.+......+. + ..++ +|++.|+.+..+ .|.++|..+.+.+.++.....+. .-..++.+.|. +|++. ....
T Consensus 128 ~~~ti~~~~e-G--wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~--~v~~lNeLe~~-dG~lyanvw~ 199 (268)
T 3nok_A 128 RERTTRYSGE-G--WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQ--PVELINELECA-NGVIYANIWH 199 (268)
T ss_dssp EEEEEECSSC-C--CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTE--ECCCEEEEEEE-TTEEEEEETT
T ss_pred EEEEEeCCCc-e--eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCc--ccccccccEEe-CCEEEEEECC
Confidence 8843333222 1 3333 568888777666 99999999999999988753111 01244667776 77744 4446
Q ss_pred CCcEEEEeCCCCeeEEEeecc-------------ccCeEEEEEeCCCCEEEEEec
Q psy12614 223 GGFVRFWDGKTGVQWSDVKTH-------------KKDILALTVSEDENYLYCAGV 264 (708)
Q Consensus 223 dg~i~~wd~~~~~~~~~~~~~-------------~~~i~~~~~s~~~~~l~~~~~ 264 (708)
+..|.+.|.++|+.+..+... ..-...++++|+++.|++.+.
T Consensus 200 s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 200 SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 789999999999998887532 135578999998877776654
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.94 E-value=7.3e-07 Score=81.01 Aligned_cols=192 Identities=12% Similarity=0.093 Sum_probs=132.3
Q ss_pred EEecCCCCCcEEEEEEe-CCEEEEEcCCC--cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEe-CCCcEEEEE
Q psy12614 64 VFIGDPLSNSIECLTWF-NDRLFSGGLQG--FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQ 139 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~-~~~l~s~~~d~--~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd 139 (708)
.+ .|....-...|.|+ +..+.+.+.+| .|+++|+++++.+..+... .......+.++++.|.... .++.+.+||
T Consensus 36 ~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D 113 (262)
T 3nol_A 36 SY-PHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWN 113 (262)
T ss_dssp EE-ECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEE
T ss_pred Ee-cCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEE
Confidence 44 34423456889999 54555666665 8999999999998887643 3444443444555665554 588999999
Q ss_pred ccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEE-
Q psy12614 140 ISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTI- 217 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l- 217 (708)
.++.+.+......+ .+ ..++ +|++.|+.+... .|.++|..+.+.+.++.....+. .-..++.+.|. +|++
T Consensus 114 ~~t~~~~~ti~~~~-eG--~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~--~~~~lNELe~~-~G~ly 185 (262)
T 3nol_A 114 IRNLRQVRSFNYDG-EG--WGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGE--ELPELNELEWV-DGEIF 185 (262)
T ss_dssp TTTCCEEEEEECSS-CC--CCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTE--ECCCEEEEEEE-TTEEE
T ss_pred CccCcEEEEEECCC-Cc--eEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCc--cccccceeEEE-CCEEE
Confidence 99999874333332 12 2333 567777766656 99999999999999988753111 01334556776 7874
Q ss_pred EEEcCCCcEEEEeCCCCeeEEEeecc------------ccCeEEEEEeCCCCEEEEEecC
Q psy12614 218 ITGDSGGFVRFWDGKTGVQWSDVKTH------------KKDILALTVSEDENYLYCAGVD 265 (708)
Q Consensus 218 ~~~~~dg~i~~wd~~~~~~~~~~~~~------------~~~i~~~~~s~~~~~l~~~~~d 265 (708)
+....++.|.+.|.++|+.+..+... ..-...++|+|+++.|++.+..
T Consensus 186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 44456889999999999998887532 1345889999999888877753
No 254
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.93 E-value=0.00017 Score=79.68 Aligned_cols=487 Identities=11% Similarity=0.073 Sum_probs=261.4
Q ss_pred CcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEE-eecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEE
Q psy12614 72 NSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSST-AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK 149 (708)
Q Consensus 72 ~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~ 149 (708)
..|.+|.-. ..+|-.|+.+| +..||-..-+..... ......|.++....+| .|-+|+.+| +..||..+.... .
T Consensus 22 n~V~~I~qD~~G~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~--~ 96 (758)
T 3ott_A 22 SVVSCFLQDSEGLIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYE--Q 96 (758)
T ss_dssp CCEEEEEECTTSCEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEEC--C
T ss_pred ceEEEEEECCCCCEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEE--C
Confidence 678888887 66777777776 556663221111000 0123468888877776 455666655 789998877543 1
Q ss_pred ecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEE
Q psy12614 150 LLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFW 229 (708)
Q Consensus 150 ~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~w 229 (708)
........|.++.. .+| .|..++.+.+..+|..+++.. .+...... -....|.++...++|.+..++.+ -|..+
T Consensus 97 ~~~~~~~~i~~i~~-~~g-~lWigt~~Gl~~~~~~~~~~~-~~~~~~~~--l~~~~i~~i~~d~~g~lWigt~~-Gl~~~ 170 (758)
T 3ott_A 97 PETDFPTDVRTMAL-QGD-TLWLGALNGLYTYQLQSRKLT-SFDTRRNG--LPNNTIYSIIRTKDNQIYVGTYN-GLCRY 170 (758)
T ss_dssp CSCCCCSCEEEEEE-ETT-EEEEEETTEEEEEETTTCCEE-EECHHHHC--CSCSCEEEEEECTTCCEEEEETT-EEEEE
T ss_pred cccCCCceEEEEEe-cCC-cEEEEcCCcceeEeCCCCeEE-EeccCCCC--cCCCeEEEEEEcCCCCEEEEeCC-CHhhC
Confidence 11112345777654 355 455555558888998766543 23111000 11356888888888887667654 48888
Q ss_pred eCCCCeeEEEe-ec----cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc
Q psy12614 230 DGKTGVQWSDV-KT----HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304 (708)
Q Consensus 230 d~~~~~~~~~~-~~----~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 304 (708)
+..+++..... .. ....|.++...+++..|..|+. +-+..++..+ ++ +.....+ ....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~--------~~------~~~~~~l--~~~~ 233 (758)
T 3ott_A 171 IPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPST--------GQ------IKQTEAF--HNNS 233 (758)
T ss_dssp ETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTT--------TE------EEEEEEE--EEEE
T ss_pred ccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCC--------Ce------EEeccCC--CCCe
Confidence 88766543221 11 1224788888887776666664 4688888766 32 1111111 2345
Q ss_pred eEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCcc------C--CCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCC
Q psy12614 305 VKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCT------L--AQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQST 375 (708)
Q Consensus 305 v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~------~--~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~ 375 (708)
|.++... ...|..|+. +-+.+++..+..+..+... . ..+.++....+|.+-+....+ +.++......
T Consensus 234 i~~i~~d~~g~lWigT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~~~~~~~~-- 309 (758)
T 3ott_A 234 IKSLALDGNGDLLAGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYG-ISLSRYNSAL-- 309 (758)
T ss_dssp EEEEEECTTCCEEEEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSS-EEEECCCC-C--
T ss_pred EEEEEEcCCCCEEEEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCc-ccccccCCce--
Confidence 7788777 555666664 4577888877654433211 1 122345556677776666554 4443321100
Q ss_pred CCCCCCCCCcccCCCCceEEEEEE----ecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCC--cc
Q psy12614 376 DLSSHSNTTGVPLLSFPRLIVKMS----AVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLP--AP 449 (708)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~--~~ 449 (708)
...... ......|.++....+|.+.+...+ .+..++...+.. ..+.....-. ..
T Consensus 310 ------------------~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~-Gl~~~~~~~~~~-~~~~~~~~~~~~~~ 369 (758)
T 3ott_A 310 ------------------QFIPISQITGTGDGNQFYSLFRDSKGFYWFGGAN-GLIRFTDPAGER-HDAIWYRMGDKTYP 369 (758)
T ss_dssp ------------------EEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETT-EEEEESCTTSSC-CCCEEECTTCSSSC
T ss_pred ------------------eEEecccCCCCCCCceEEEEEEcCCCCEEEeeCC-cceeeccccccc-ceeEEeccCCcCCC
Confidence 111100 012346888888888876665444 444444322110 0111111000 01
Q ss_pred cccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEEC
Q psy12614 450 LFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKN 528 (708)
Q Consensus 450 ~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~ 528 (708)
.....|.++.-..+|.+-+ |+.+|. .++..++..+....... .+......|.++...++|++.+ |+..+-+.+++.
T Consensus 370 l~~~~v~~i~~d~~g~lWi-gt~~GL~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~d~~g~lWi-gT~~~Gl~~~~~ 446 (758)
T 3ott_A 370 LSHNRIRHIYEDKEQQLWI-ATDGSINRYDYATRQFIHYNIVDN-TGTYNTNWTYYIFEDTAGQLWI-STCLGGIFVVDK 446 (758)
T ss_dssp CSCSCEEEEEECTTSCEEE-EETTEEEEEETTTTEEEEEEEECC-C--CBSSSEEEEEECTTSEEEE-EESSSCEEEEEH
T ss_pred CCCCceEEEEECCCCCEEE-EeCCcHhhcCcCCCcEEEeecCCC-cCCCCCceEEEEEEcCCCCEEE-EECCCceEEEcc
Confidence 1123577777777777655 444443 44444442222221111 1100134688888888876554 555566788875
Q ss_pred Cce-------e---eec---CC-CCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCC
Q psy12614 529 GQH-------H---ASL---PR-YRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLP 594 (708)
Q Consensus 529 ~~~-------~---~~~---~~-~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (708)
.+. . ..+ .+ ....|.++...++|++.+.++..+-|..+|..+++..... .... .....
T Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~-------~~~~-~~~~~ 518 (758)
T 3ott_A 447 HKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLF-------ADEL-TGEKS 518 (758)
T ss_dssp HHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEEC-------TTTS-CGGGC
T ss_pred ccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEec-------CCCc-CCCcc
Confidence 421 1 011 11 1235888999888887664444455888998876644110 0001 11245
Q ss_pred eeEEEeCCCCCceEEEEcCeeEEEEecCC
Q psy12614 595 VLGIEFDPQDSSLIYLMDDSALCVINKNK 623 (708)
Q Consensus 595 i~~l~~s~~~~~l~~~~~d~~i~~wd~~~ 623 (708)
+.++....+|...+ ++..| |..+|...
T Consensus 519 ~~~i~~d~~g~lWi-gt~~G-l~~~~~~~ 545 (758)
T 3ott_A 519 PNYLLCDEDGLLWV-GFHGG-VMRINPKD 545 (758)
T ss_dssp EEEEEECTTSCEEE-EETTE-EEEECC--
T ss_pred cceEEECCCCCEEE-EecCc-eEEEecCC
Confidence 77888888887554 44454 78887643
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.93 E-value=2.3e-06 Score=90.15 Aligned_cols=301 Identities=15% Similarity=0.180 Sum_probs=182.2
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCc--------EEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEee
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNS--------IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAV 109 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~--------v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 109 (708)
+..|.+++.++.|.-+|..+|+.+= .+.... ... -..+++.++.++.++.|+.|..+|.++|+.+.....
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W-~~~~~~-~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLW-TYNHRL-PDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEE-EEECCC-CTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEE-EEcCCC-CcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 4456666664459999999998865 333221 010 123445588899999999999999999999887664
Q ss_pred cCC----ceE-EEEEec---CCC-EEEEEeC------CCcEEEEEccCCcEEEEEeccc-c----cc-------------
Q psy12614 110 TSG----TCW-CLSVHK---KKR-LLAAGTE------QGHINLFQISDEGLLYEKLLDR-Q----QG------------- 156 (708)
Q Consensus 110 ~~~----~v~-~~~~s~---~~~-~la~~~~------d~~i~iwd~~~~~~~~~~~~~~-~----~~------------- 156 (708)
... .+. +..+.. +|+ .+++++. ++.|+-+|..+|+.+....... + .+
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence 321 111 111222 233 5666542 7899999999999876443210 0 00
Q ss_pred ---------------------cEEEEEECCCCCEEEEecC-------------------------CeEEEEEcCCCceEE
Q psy12614 157 ---------------------RILCTAWHSSGDYLVTGCA-------------------------AAVRVWDIHKGHAIH 190 (708)
Q Consensus 157 ---------------------~v~~~~~s~d~~~l~~~~~-------------------------d~i~iwd~~~~~~~~ 190 (708)
.-..+++.|+...++.+.. ..|..+|..+|+.+.
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 0013456677677765542 269999999999998
Q ss_pred EEEecccCC--C-CCceeEEEEEEc-cCC----EEEEEcCCCcEEEEeCCCCeeEEEeeccc-------------cC---
Q psy12614 191 KMSLDKSSK--F-SKNTAVWCVAFC-ADF----TIITGDSGGFVRFWDGKTGVQWSDVKTHK-------------KD--- 246 (708)
Q Consensus 191 ~~~~~~~~~--~-~~~~~v~~~~~~-~~~----~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-------------~~--- 246 (708)
.+....... + ....++. +... .+| .++.++.+|.++++|.++|+.+....... .+
T Consensus 306 ~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~ 384 (582)
T 1flg_A 306 FYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVER 384 (582)
T ss_dssp EEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEEC
T ss_pred EEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEc
Confidence 887542100 0 0011222 1221 466 26788999999999999999876654321 00
Q ss_pred -----------------------------eEEEEEeCCCCEEEEEe---------------------------------c
Q psy12614 247 -----------------------------ILALTVSEDENYLYCAG---------------------------------V 264 (708)
Q Consensus 247 -----------------------------i~~~~~s~~~~~l~~~~---------------------------------~ 264 (708)
-..++++|+..++++.. .
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~ 464 (582)
T 1flg_A 385 EGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDH 464 (582)
T ss_dssp TTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSC
T ss_pred cccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCC
Confidence 01356777666665543 2
Q ss_pred CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE--EEEEeCCEEEEEcCCCeEEEEeCCCCc-eeecCcc-
Q psy12614 265 DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK--SLALHGNRLYSGGLDSYLSLSYYPPKT-LVKYPCT- 340 (708)
Q Consensus 265 dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~--~l~~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~- 340 (708)
+|.|.-||+.+ |+ ..|... .. ..+. .+...+.+++.++.|+.++.+|.++++ +.++..+
T Consensus 465 ~G~l~A~D~~t--------G~----~~W~~~----~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 465 VGSLRAMDPVS--------GK----VVWEHK----EH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp SEEEEEECTTT--------CC----EEEEEE----ES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cceEEEEECCC--------CC----EEEEec----CC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCC
Confidence 57788888888 65 334322 11 1221 223338889999999999999998877 3333312
Q ss_pred CCCCceEEEEcCCcEEEE
Q psy12614 341 LAQSTPVSLAKDIQHVLL 358 (708)
Q Consensus 341 ~~~~~~~~~s~~~~~l~~ 358 (708)
......+.+..+|+..++
T Consensus 528 g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 528 GIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp CCCSCCEEEEETTEEEEE
T ss_pred CcccCceEEEECCEEEEE
Confidence 223345777788875554
No 256
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.92 E-value=3.4e-07 Score=83.04 Aligned_cols=186 Identities=9% Similarity=-0.019 Sum_probs=130.0
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCE-EEEEcCCCcEEEEECCCCeEeE
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDR-LFSGGLQGFVNEYDMRRLNIKS 105 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~-l~s~~~d~~i~vwd~~~~~~~~ 105 (708)
.-...+.|+. +.+.++.+.+|.|+++|+.+++.+... .+.. .--..+++.++. .+..-.++.+.++|.++.+.+.
T Consensus 55 ~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~--~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 55 AFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGN--IFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp CCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTT--CCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred cccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC--cceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEE
Confidence 3347888874 455666677889999999999988755 3222 233557777444 4455578999999999999999
Q ss_pred EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccc---cEEEEEECCCCCEEEEecCC-eEEEE
Q psy12614 106 STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG---RILCTAWHSSGDYLVTGCAA-AVRVW 181 (708)
Q Consensus 106 ~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~s~d~~~l~~~~~d-~i~iw 181 (708)
++..... =+ .+++|++.|+.+..++.|.++|.++.+.........+.. .++.+.|. +|+..+..-.+ .|.+.
T Consensus 131 ti~~~~e-Gw--GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 131 TTRYSGE-GW--GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEI 206 (268)
T ss_dssp EEECSSC-CC--CEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEE
T ss_pred EEeCCCc-ee--EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEE
Confidence 9885322 23 344678888887778999999999988874333333332 34667776 77555544445 99999
Q ss_pred EcCCCceEEEEEeccc-------CCCCCceeEEEEEEccCC-EEEEEc
Q psy12614 182 DIHKGHAIHKMSLDKS-------SKFSKNTAVWCVAFCADF-TIITGD 221 (708)
Q Consensus 182 d~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~-~l~~~~ 221 (708)
|..+|+.+..+....- .. ......+.||+.|++ +|++.+
T Consensus 207 Dp~TG~V~~~Idl~~L~~~~~~~~~-~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 207 DPATGTVVGVIDASALTRAVAGQVT-NPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CTTTCBEEEEEECHHHHHHHTTTCC-CTTCCEEEEEECTTTCCEEEEE
T ss_pred eCCCCcEEEEEECCCCccccccccc-CcCCceEEEEEcCCCCEEEEeC
Confidence 9999999999987520 01 124567999999987 444433
No 257
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.92 E-value=8.7e-07 Score=81.73 Aligned_cols=194 Identities=9% Similarity=0.041 Sum_probs=136.0
Q ss_pred cEEEEEEe-CCEEEEEcC---CCcEEEEECCCCeEeEEEeecCC-ceEEEEEecCCCEEEEEe-CCCcEEEEEccCCcEE
Q psy12614 73 SIECLTWF-NDRLFSGGL---QGFVNEYDMRRLNIKSSTAVTSG-TCWCLSVHKKKRLLAAGT-EQGHINLFQISDEGLL 146 (708)
Q Consensus 73 ~v~~l~~~-~~~l~s~~~---d~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~ 146 (708)
....++|+ .+.|+.++. ++.|.+.|+.+++.+..+..... ....+++. ++.|..+. .++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 46899999 356666542 68999999999999888763221 22345554 55555544 5789999999998887
Q ss_pred EEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEE-EEEcCCC
Q psy12614 147 YEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTI-ITGDSGG 224 (708)
Q Consensus 147 ~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~~~~dg 224 (708)
...... ... ...+++||+.|+++..+ .|.++|..+.+.+..+.....+. .-..++.+.|. +|++ +....++
T Consensus 100 ~~i~~g-~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~--p~~~~nele~~-dg~lyvn~~~~~ 172 (266)
T 2iwa_A 100 KNFTHQ-MKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGH--RVIRLNELEYI-NGEVWANIWQTD 172 (266)
T ss_dssp EEEECC-SSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTE--ECCCEEEEEEE-TTEEEEEETTSS
T ss_pred EEEECC-CCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCc--ccccceeEEEE-CCEEEEecCCCC
Confidence 332222 111 12345678777776666 99999999999999988753110 01236778888 7874 4555678
Q ss_pred cEEEEeCCCCeeEEEeeccc-------------cCeEEEEEeCCCCEEEEEe-cCCeEEEEEccC
Q psy12614 225 FVRFWDGKTGVQWSDVKTHK-------------KDILALTVSEDENYLYCAG-VDPTVVCFQRTR 275 (708)
Q Consensus 225 ~i~~wd~~~~~~~~~~~~~~-------------~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~ 275 (708)
.|.+.|..+++.+..+.... .....++|+|+++++++++ ..+.+...++..
T Consensus 173 ~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 173 CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 99999999999988886321 3558999999987666555 578888888876
No 258
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.90 E-value=5e-07 Score=92.15 Aligned_cols=261 Identities=13% Similarity=0.023 Sum_probs=168.9
Q ss_pred EEEEcCCCcEEEEECCCCeEeEEEeec---------------------------------C------CceEEEEEec---
Q psy12614 84 LFSGGLQGFVNEYDMRRLNIKSSTAVT---------------------------------S------GTCWCLSVHK--- 121 (708)
Q Consensus 84 l~s~~~d~~i~vwd~~~~~~~~~~~~~---------------------------------~------~~v~~~~~s~--- 121 (708)
+.||+..|.++|+-+.+++.+..+... . +.....+.|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 567889999999999998876665311 1 2223456665
Q ss_pred --CCCEEEEEeC-CCcEEEEEccCCcEEEEEecccccccEEEEEE-C-CCCCEEEEec-----------------C-C-e
Q psy12614 122 --KKRLLAAGTE-QGHINLFQISDEGLLYEKLLDRQQGRILCTAW-H-SSGDYLVTGC-----------------A-A-A 177 (708)
Q Consensus 122 --~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~-s-~d~~~l~~~~-----------------~-d-~ 177 (708)
||++|.+... ++.|.+.|+.+.+......+.. ......+++ + |+++++++++ . + .
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 8888887665 5569999999998763223332 244778887 5 9999998884 2 2 7
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC---------------------------------
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG--------------------------------- 223 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d--------------------------------- 223 (708)
+.++|..+.+...++..+. ....++++|||+ +++.+.+
T Consensus 177 vtvID~~t~~v~~qI~Vgg--------~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~G 248 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG--------NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAG 248 (595)
T ss_dssp EEEEETTTTEEEEEEEESS--------CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHT
T ss_pred EEEEECCCCeEEEEEEeCC--------CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCC
Confidence 9999999999999988752 234567888885 3333322
Q ss_pred -----CcEEEEeCCC--Cee-EEEeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEE
Q psy12614 224 -----GFVRFWDGKT--GVQ-WSDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVR 294 (708)
Q Consensus 224 -----g~i~~wd~~~--~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~ 294 (708)
+.|.+.|..+ ++. +..+.. .....++.++|||+++++++ .+..+.++|+.+.... ..++ ...... .
T Consensus 249 k~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~--~~~~-l~~~~~-v 323 (595)
T 1fwx_A 249 DYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAV--FYEN-ADPRSA-V 323 (595)
T ss_dssp CSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHH--HHSC-CCGGGG-E
T ss_pred CeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccc--cccc-cCcccc-e
Confidence 2477888877 544 555543 34557899999999888776 4679999999861000 0000 000000 1
Q ss_pred eEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCC----------Cc-eeecCccCC-----CCceEEEEcCCcEE
Q psy12614 295 SVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPP----------KT-LVKYPCTLA-----QSTPVSLAKDIQHV 356 (708)
Q Consensus 295 ~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~----------~~-~~~~~~~~~-----~~~~~~~s~~~~~l 356 (708)
... ..-......++|+ |...++.-.|+.|..|+++. .. +.++..+.. ......++|||++|
T Consensus 324 ~~~-v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l 402 (595)
T 1fwx_A 324 VAE-PELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWL 402 (595)
T ss_dssp EEC-CBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEE
T ss_pred EEE-cCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEE
Confidence 111 1223457788898 64455677899999999876 22 333331111 11334568999999
Q ss_pred EEE
Q psy12614 357 LLQ 359 (708)
Q Consensus 357 ~~~ 359 (708)
++.
T Consensus 403 ~~~ 405 (595)
T 1fwx_A 403 VCL 405 (595)
T ss_dssp EEE
T ss_pred EEc
Confidence 985
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.90 E-value=1.1e-06 Score=85.95 Aligned_cols=235 Identities=9% Similarity=0.015 Sum_probs=149.8
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecC-C---------------CCCcEEEEEEe--CCEEEEEcC
Q psy12614 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGD-P---------------LSNSIECLTWF--NDRLFSGGL 89 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h-~---------------~~~~v~~l~~~--~~~l~s~~~ 89 (708)
...+++++++|+++.++..++.|..||..++.......... . ....+.++++. +..|+.+..
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 35578899999988888889999999988765432111110 0 00357889998 567777766
Q ss_pred CCcEEEEECCCCeEeEEEe----ecCCceEEEEEec-CCCEEEEEeC-----------------CCcEEEEEccCCcEEE
Q psy12614 90 QGFVNEYDMRRLNIKSSTA----VTSGTCWCLSVHK-KKRLLAAGTE-----------------QGHINLFQISDEGLLY 147 (708)
Q Consensus 90 d~~i~vwd~~~~~~~~~~~----~~~~~v~~~~~s~-~~~~la~~~~-----------------d~~i~iwd~~~~~~~~ 147 (708)
.+.|..+|..++....... ........+++.+ +|+..++-.. ++.|..||..+++...
T Consensus 100 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 100 YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 6668899987654322111 1123578899999 9986665422 3678888887776531
Q ss_pred EEecccccccEEEEEECCCCCEEEEe-cCC-eEEEEEcCCCc--eEEEEEecccCCCCCceeEEEEEEccCCEEEEEcC-
Q psy12614 148 EKLLDRQQGRILCTAWHSSGDYLVTG-CAA-AVRVWDIHKGH--AIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDS- 222 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~d~~~l~~~-~~d-~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~- 222 (708)
.. ........++|+|+++.|+.+ ..+ .|.++++.... ....+... .. ...+++.++|++.++..
T Consensus 180 --~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~-------~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 180 --LL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI-------PN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp --EE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC-------SS-EEEEEECTTSCEEEEEEE
T ss_pred --ec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC-------CC-CCCeEECCCCCEEEEecC
Confidence 11 112234678999999876655 444 89999987532 11222211 23 67889999997544433
Q ss_pred ----------CCcEEEEeCCCCeeEEEeeccc----cCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 223 ----------GGFVRFWDGKTGVQWSDVKTHK----KDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 223 ----------dg~i~~wd~~~~~~~~~~~~~~----~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.+.|..+|. .++.+..+.... ..+.++++ .++++.++....+.|..+++..
T Consensus 249 ~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp ETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred cccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 367889986 477777665432 34666766 4555555555678899998865
No 260
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.90 E-value=0.00028 Score=80.09 Aligned_cols=393 Identities=9% Similarity=0.072 Sum_probs=215.2
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--------CCEEEEEcC-CCcEEEEE
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--------NDRLFSGGL-QGFVNEYD 97 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--------~~~l~s~~~-d~~i~vwd 97 (708)
..|.+.+.+. .+++.+. ++.+.++++..+.... .....+...|.|+++. ++++++|.. |++++|++
T Consensus 514 ~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~--~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~s 588 (1158)
T 3ei3_A 514 KNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQ--ISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 588 (1158)
T ss_dssp CCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEE--EEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEE
T ss_pred CEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceee--ecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEE
Confidence 3466666553 4666665 5788888887654322 1112234789999987 368999986 99999999
Q ss_pred CCCCeEeEEEeec-CCceEEEEEec--CCCEEEEEeCCCcEEEEEcc--CCcEEEEE-ecccccccEEEEEECCCCC-EE
Q psy12614 98 MRRLNIKSSTAVT-SGTCWCLSVHK--KKRLLAAGTEQGHINLFQIS--DEGLLYEK-LLDRQQGRILCTAWHSSGD-YL 170 (708)
Q Consensus 98 ~~~~~~~~~~~~~-~~~v~~~~~s~--~~~~la~~~~d~~i~iwd~~--~~~~~~~~-~~~~~~~~v~~~~~s~d~~-~l 170 (708)
+.+.+.+....-. .....++.+.. ...+|..|-.||.+.-+.++ ++++...+ .+-+ ..++.-..|...+. .+
T Consensus 589 L~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V 667 (1158)
T 3ei3_A 589 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNV 667 (1158)
T ss_dssp TTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEE
T ss_pred CCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeE
Confidence 9987766543321 12344444432 34578889999998766654 55554322 2222 23444444433343 34
Q ss_pred EEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC---EEEEEcCCCcEEEEeCCCCe--eEEEeeccc
Q psy12614 171 VTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF---TIITGDSGGFVRFWDGKTGV--QWSDVKTHK 244 (708)
Q Consensus 171 ~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~l~~~~~dg~i~~wd~~~~~--~~~~~~~~~ 244 (708)
++++.. .+. +.- .++.... ... ....-....|+... -++..+ ++.++|..+...+ .+++++ -.
T Consensus 668 ~a~s~rp~li-y~~-~~~l~~s-~l~------~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~ 736 (1158)
T 3ei3_A 668 FACSDRPTVI-YSS-NHKLVFS-NVN------LKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVP-LY 736 (1158)
T ss_dssp EEESSSCEEE-EES-SSSEEEE-EBS------SSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEE-CS
T ss_pred EEECCCCEEE-EEc-CCceEEe-ccC------hHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEe-CC
Confidence 444444 444 332 3443222 111 02222333454332 255444 4558888775432 234444 34
Q ss_pred cCeEEEEEeCCCCEEEEEecCCe-------------------------------------------------EEEEEccC
Q psy12614 245 KDILALTVSEDENYLYCAGVDPT-------------------------------------------------VVCFQRTR 275 (708)
Q Consensus 245 ~~i~~~~~s~~~~~l~~~~~dg~-------------------------------------------------i~iw~~~~ 275 (708)
..+..++++|+.+.++.+..+.. |++.|..+
T Consensus 737 ~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t 816 (1158)
T 3ei3_A 737 ESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHT 816 (1158)
T ss_dssp SEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTT
T ss_pred CCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCC
Confidence 67788999998887766553321 11222111
Q ss_pred CcccccCCCCCCCCcceEEeEEEec-cccceEEEEEe------CCEEEEEc----------CCCeEEEEeCCCCceeecC
Q psy12614 276 KPQVCSTSGPEQGSSVWVRSVNRVI-HEGDVKSLALH------GNRLYSGG----------LDSYLSLSYYPPKTLVKYP 338 (708)
Q Consensus 276 ~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~v~~l~~~------~~~l~s~~----------~d~~i~iw~~~~~~~~~~~ 338 (708)
|.....+.. ....+.+++.. ..+++.|+ ..|.|.++++.+..+..+.
T Consensus 817 ----------------~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~ 880 (1158)
T 3ei3_A 817 ----------------FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVA 880 (1158)
T ss_dssp ----------------CCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEE
T ss_pred ----------------CeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEE
Confidence 111111111 11224444432 36788776 3578999998766554444
Q ss_pred ccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEE
Q psy12614 339 CTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418 (708)
Q Consensus 339 ~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l 418 (708)
.........++.+=+.+++++-++.+++|++...+ .+. .....-..|..+.+...|.++
T Consensus 881 ~~~v~g~v~al~~~~g~Lla~ig~~l~vy~l~~~~--------------------~L~-~~~~~~~~i~~~~l~~~~~~I 939 (1158)
T 3ei3_A 881 EKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEK--------------------ELR-TECNHYNNIMALYLKTKGDFI 939 (1158)
T ss_dssp EEEESSCEEEEEEETTEEEEEETTEEEEEEECTTS--------------------CEE-EEEEECCCSCEEEEEEETTEE
T ss_pred EEEcCCcCEEEeeeCCEEEEEcCCEEEEEECCCCc--------------------eEE-EEeeccccEEEEEEeccCCEE
Confidence 22233445555554457777888999999998643 122 111111223333333357788
Q ss_pred EEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCcEEEe
Q psy12614 419 AYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYII 479 (708)
Q Consensus 419 ~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~ 479 (708)
++|+ -..+.++....... .+.. +..+.....++++.|-.++ .++.+..+|.++-+
T Consensus 940 ~vgD~~~Sv~~~~y~~~~~--~L~~---~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl 995 (1158)
T 3ei3_A 940 LVGDLMRSVLLLAYKPMEG--NFEE---IARDFNPNWMSAVEILDDD-NFLGAENAFNLFVC 995 (1158)
T ss_dssp EEEESSBCEEEEEEETTTT--EEEE---EEECCSCBCEEEEEEEETT-EEEEEETTSEEEEE
T ss_pred EEEEhhheEEEEEEEcCCC--eEEE---EEeecccccEEEEEEEccC-cEEEEcCCCcEEEE
Confidence 8888 66788887775333 3333 2223335567778887665 55667888885544
No 261
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.89 E-value=0.00016 Score=76.65 Aligned_cols=483 Identities=8% Similarity=-0.000 Sum_probs=261.8
Q ss_pred CcEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEECCCCe
Q psy12614 27 KVINCIACEPKSSRLAVS-RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~-~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~~ 102 (708)
..+..++|++.+..|..+ ..++.|..+++....... .+.... .....|++. ++.| ++-...+.|.+.++....
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~-v~~~g~--~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEH-VVEFGL--DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-EECSSC--SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEE-EEeCCC--CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence 467899999977776655 457889999987654332 444332 456778887 5555 555567889999987654
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AV 178 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i 178 (708)
....+...-.....|++.|....|..... .+.|...++...... ... ..-.....+++++++..|+.+... .|
T Consensus 114 ~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~--~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I 190 (628)
T 4a0p_A 114 RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT--TLV-PNVGRANGLTIDYAKRRLYWTDLDTNLI 190 (628)
T ss_dssp CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE--EEE-CSCSSEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE--EEE-CCCCCcceEEEccccCEEEEEECCCCEE
Confidence 33333344456789999997666666542 567888888766553 222 234567899999988888777655 89
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCE
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENY 258 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 258 (708)
...|+..... ..+... ......+++..+.-+++-...+.|...|..+|+....+.........+......+.
T Consensus 191 ~~~d~dG~~~-~v~~~~-------l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q 262 (628)
T 4a0p_A 191 ESSNMLGLNR-EVIADD-------LPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQ 262 (628)
T ss_dssp EEEETTSCSC-EEEEEC-------CSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGS
T ss_pred EEEcCCCCce-EEeecc-------CCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeeccc
Confidence 9999865443 333221 23355777765333455556788999998777665555433333334432221100
Q ss_pred EEEEecC--------CeEEEEEc-cCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeC
Q psy12614 259 LYCAGVD--------PTVVCFQR-TRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 259 l~~~~~d--------g~i~iw~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~ 329 (708)
- +... ..+.+-.. ..-.+.|.. | +.......+|.. ...+|+.+. ...|+-..+
T Consensus 263 ~--~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~-g-------------~~l~~d~~~C~~-~~~~Ll~s~-~~~i~~i~l 324 (628)
T 4a0p_A 263 S--GWNECASSNGHCSHLCLAVPVGGFVCGCPA-H-------------YSLNADNRTCSA-PTTFLLFSQ-KSAINRMVI 324 (628)
T ss_dssp C--CCCTTTTTGGGCSSEEEEETTTEEEEECST-T-------------CEECTTSSCEEC-CSSEEEEEE-TTEEEEECC
T ss_pred c--cceEeccCCCCcchhhhcCCCCCeeEEcCC-C-------------cEecccCCcCcc-ccceeeeec-cceEEEEec
Confidence 0 0000 00111000 000000000 0 000011111111 123343333 345655555
Q ss_pred CCCce--eecC-ccCCCCceEEEEcCCcEEEEE--cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEE-Ee--c
Q psy12614 330 PPKTL--VKYP-CTLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKM-SA--V 401 (708)
Q Consensus 330 ~~~~~--~~~~-~~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~ 401 (708)
..... ..++ ........+++.+....|... ..+.|..++..... ...+... .. .
T Consensus 325 ~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~------------------~~~v~~~~~~~~~ 386 (628)
T 4a0p_A 325 DEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQ------------------GFTVVVSSVPSQN 386 (628)
T ss_dssp CTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS------------------CEEEEC-------
T ss_pred ccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCC------------------ceEEEEccccccc
Confidence 43321 1111 123345568888876666654 45677777665422 0111111 00 1
Q ss_pred CCCceEEEEeCCCCcEEEEEc--CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEec-CC--cE
Q psy12614 402 NNATIRCSVVSNDGKYVAYST--ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSL-NG--PL 476 (708)
Q Consensus 402 ~~~~i~~~~~s~~g~~l~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~-dg--~i 476 (708)
....+..+|+...++.|..++ .+.|.+.+++ +.. ...+ +.... .....+++.|...+|+.... .. .|
T Consensus 387 ~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~---G~~-~~~l--~~~~l--~~Pr~iavdp~~g~ly~tD~g~~~~~I 458 (628)
T 4a0p_A 387 LEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD---GRS-VGVV--LKGEQ--DRPRAVVVNPEKGYMYFTNLQERSPKI 458 (628)
T ss_dssp -CCCEEEEEEETTTTEEEEEETTTTEEEEEETT---SCE-EEEE--EECTT--CCEEEEEEETTTTEEEEEEEETTEEEE
T ss_pred ccCCcceEEeeccCCeEEEEcCCCCEEEEEECC---CCe-EEEE--EeCCC--CceeeEEEecCCCeEEEeecCCCCCeE
Confidence 234678999998877776543 6677777664 221 1111 11112 23455999995444444433 22 36
Q ss_pred EEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEec-CCeEEEEECC-ceeeecC-CCCCCceEEEEcCCCCE
Q psy12614 477 YIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADR-KSHVVIWKNG-QHHASLP-RYRKPSTAMAIHPTLST 553 (708)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d~~i~iw~~~-~~~~~~~-~~~~~v~~l~~s~d~~~ 553 (708)
+...... .....+.... -...+.++++++++.|+.++. .+.|...+++ +....+. .....+.+|+... ..
T Consensus 459 ~r~~~dG-~~~~~l~~~~----l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~~~~~P~glav~~--~~ 531 (628)
T 4a0p_A 459 ERAALDG-TEREVLFFSG----LSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFE--NW 531 (628)
T ss_dssp EEEETTS-CSCEEEECSS----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCEEEEEEET--TE
T ss_pred EEEeCCC-CCcEEEEecc----CCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcCCCCCcEEEEEEC--CE
Confidence 6654321 1122222111 335689999998888887764 5789999998 3223322 3344567777753 44
Q ss_pred EEEEe-cCCcEEEEEcCCCCCC
Q psy12614 554 LVTVY-SDHRIVEFDLNRKAFT 574 (708)
Q Consensus 554 l~~~~-~dg~i~vwd~~~~~~~ 574 (708)
|..+. ..+.|...|..+++..
T Consensus 532 ly~tD~~~~~i~~~~k~~G~~~ 553 (628)
T 4a0p_A 532 LYWIDKQQQMIEKIDMTGREGR 553 (628)
T ss_dssp EEEEETTTTEEEEEETTSSSCC
T ss_pred EEEEECCCCeEEEEECcCCCCc
Confidence 55444 4567888887766543
No 262
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.87 E-value=4.2e-06 Score=87.93 Aligned_cols=299 Identities=12% Similarity=0.115 Sum_probs=182.4
Q ss_pred CCEEEEEeC-CCcEEEEeC-CCCCeEEEEEecCCCCC----------cEEEEEE--eCCE----EEEEcCCCcEEEEECC
Q psy12614 38 SSRLAVSRA-DQSIEIWDI-SETPHVDRVFIGDPLSN----------SIECLTW--FNDR----LFSGGLQGFVNEYDMR 99 (708)
Q Consensus 38 ~~~la~~~~-dg~v~iwd~-~~~~~~~~~~~~h~~~~----------~v~~l~~--~~~~----l~s~~~d~~i~vwd~~ 99 (708)
+..|.+++. ++.|.-+|. .+|+.+= .+.... .. ....+++ .+.. |+.++.|+.|..+|..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW-~~~~~~-~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILW-QDKPKQ-NPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEE-EECCCC-CGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEE-EECCCC-CccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECC
Confidence 556777777 889999999 8998764 222111 00 0123556 4444 8889999999999999
Q ss_pred CCeEeEEEeecC----CceEE-EEEecCCCEEEEEe------CCCcEEEEEccCCcEEEEEecccccc------------
Q psy12614 100 RLNIKSSTAVTS----GTCWC-LSVHKKKRLLAAGT------EQGHINLFQISDEGLLYEKLLDRQQG------------ 156 (708)
Q Consensus 100 ~~~~~~~~~~~~----~~v~~-~~~s~~~~~la~~~------~d~~i~iwd~~~~~~~~~~~~~~~~~------------ 156 (708)
+|+.+....... ..+.+ ..+. ++ .+++++ .++.|+.+|.++|+.+..........
T Consensus 140 TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 140 TGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp TCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 999987765322 01221 1121 34 455554 37999999999999886544332110
Q ss_pred -----------------------cE-EEEEECCCCCEEEEecCC-----------------eEEEEEcCCCceEEEEEec
Q psy12614 157 -----------------------RI-LCTAWHSSGDYLVTGCAA-----------------AVRVWDIHKGHAIHKMSLD 195 (708)
Q Consensus 157 -----------------------~v-~~~~~s~d~~~l~~~~~d-----------------~i~iwd~~~~~~~~~~~~~ 195 (708)
.+ ..+++.++...++.+..+ .|..+|..+|+.+..+...
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~ 297 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKT 297 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESS
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecC
Confidence 00 134556677777766542 7999999999999888765
Q ss_pred ccCC--C-CCceeEEEEEEc-cCC---E-EEEEcCCCcEEEEeCCCCeeEEEeeccc-------------cCe-------
Q psy12614 196 KSSK--F-SKNTAVWCVAFC-ADF---T-IITGDSGGFVRFWDGKTGVQWSDVKTHK-------------KDI------- 247 (708)
Q Consensus 196 ~~~~--~-~~~~~v~~~~~~-~~~---~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~-------------~~i------- 247 (708)
.... + ....++. +... .+| . ++.++.+|.++++|.++|+.+....... .++
T Consensus 298 ~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~ 376 (599)
T 1w6s_A 298 PHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGT 376 (599)
T ss_dssp TTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCC
T ss_pred CCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCC
Confidence 2100 0 0011121 2222 466 3 6678899999999999999876654211 011
Q ss_pred -------------------EEEEEeCCCCEEEEEe---------------------------------------cCCeEE
Q psy12614 248 -------------------LALTVSEDENYLYCAG---------------------------------------VDPTVV 269 (708)
Q Consensus 248 -------------------~~~~~s~~~~~l~~~~---------------------------------------~dg~i~ 269 (708)
..++++|+..++++.. .+|.|.
T Consensus 377 ~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~ 456 (599)
T 1w6s_A 377 RMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIK 456 (599)
T ss_dssp CTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEE
T ss_pred CCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEE
Confidence 2467888877776542 235677
Q ss_pred EEEccCCcccccCCCCCCCCcceEEeEEEeccccceE-E-EEEeCCEEEEEcCCCeEEEEeCCCCce-eecCc-cCCCCc
Q psy12614 270 CFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK-S-LALHGNRLYSGGLDSYLSLSYYPPKTL-VKYPC-TLAQST 345 (708)
Q Consensus 270 iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~-~-l~~~~~~l~s~~~d~~i~iw~~~~~~~-~~~~~-~~~~~~ 345 (708)
-||+.+ |+ ..|.... ..+.. . +...+.+++.++.|+.++.+|.++++. .++.. ......
T Consensus 457 A~D~~t--------G~----~~W~~~~-----~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~ 519 (599)
T 1w6s_A 457 AYNAIT--------GD----YKWEKME-----RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGY 519 (599)
T ss_dssp EECTTT--------CC----EEEEEEE-----SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred EEECCC--------CC----EEeEecC-----CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEec
Confidence 777777 54 3343211 11111 1 333488888999999999999998873 33321 122335
Q ss_pred eEEEEcCCcEEEE
Q psy12614 346 PVSLAKDIQHVLL 358 (708)
Q Consensus 346 ~~~~s~~~~~l~~ 358 (708)
.+.+..+|+..++
T Consensus 520 P~~y~~~G~qyv~ 532 (599)
T 1w6s_A 520 PMTYTHKGTQYVA 532 (599)
T ss_dssp CEEEEETTEEEEE
T ss_pred cEEEEeCCEEEEE
Confidence 5667777775443
No 263
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.87 E-value=1.2e-06 Score=94.50 Aligned_cols=237 Identities=16% Similarity=0.146 Sum_probs=155.3
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCC-CCCcEEE-EEEeCCEEEEEcC------CCcEEEEECCCCeEeEEEee
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDP-LSNSIEC-LTWFNDRLFSGGL------QGFVNEYDMRRLNIKSSTAV 109 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~-~~~~v~~-l~~~~~~l~s~~~------d~~i~vwd~~~~~~~~~~~~ 109 (708)
+..|++++.|+.|..+|..+|+.+-..-.... ....+.+ ....++.++++.. +|.|..+|..+|+.+..+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 55788888899999999999998753322211 0011111 1223666666643 58999999999999887753
Q ss_pred cC-------------------------------CceEEEEEecCCCEEEEEeCCC-------------------cEEEEE
Q psy12614 110 TS-------------------------------GTCWCLSVHKKKRLLAAGTEQG-------------------HINLFQ 139 (708)
Q Consensus 110 ~~-------------------------------~~v~~~~~s~~~~~la~~~~d~-------------------~i~iwd 139 (708)
.. .....+++.|++.++++++.++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 11 1112478999888888887765 399999
Q ss_pred ccCCcEEEEEeccccc-------ccEEEEEECCCCC---EEEEecCC-eEEEEEcCCCceEEEEEecccCC---C--CCc
Q psy12614 140 ISDEGLLYEKLLDRQQ-------GRILCTAWHSSGD---YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSK---F--SKN 203 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~-------~~v~~~~~s~d~~---~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~---~--~~~ 203 (708)
..+|+.........|. .+.....+..+|+ .++.++.+ .+.++|..+|+.+.........- + ...
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g 356 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence 9999998766554443 2233233334665 68888888 99999999999986654321000 0 000
Q ss_pred eeE------------------------EEEEEccCCE-EEEE------------------------------------cC
Q psy12614 204 TAV------------------------WCVAFCADFT-IITG------------------------------------DS 222 (708)
Q Consensus 204 ~~v------------------------~~~~~~~~~~-l~~~------------------------------------~~ 222 (708)
.++ ..++++|+.. +++. ..
T Consensus 357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~ 436 (668)
T 1kv9_A 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV 436 (668)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred CccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCc
Confidence 000 1256777653 2221 12
Q ss_pred CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 223 GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 223 dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+|.|..||+.+|+.+.....+ .......+...+.++++++.|+.++.||..+
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhc
Confidence 378999999999988777643 3333344555677999999999999999999
No 264
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.82 E-value=7.9e-06 Score=73.61 Aligned_cols=191 Identities=9% Similarity=0.052 Sum_probs=129.8
Q ss_pred EEecCCCCCcEEEEEEe-CCEEEEEcCC--CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEE-EeCCCcEEEEE
Q psy12614 64 VFIGDPLSNSIECLTWF-NDRLFSGGLQ--GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAA-GTEQGHINLFQ 139 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~-~~~l~s~~~d--~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~-~~~d~~i~iwd 139 (708)
.+ .|.-..-...+.|+ +..+.+.+.. +.|+.+|+++++.+..+.... .........+++.|.. .-.++.+.+||
T Consensus 14 ~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 14 RY-PHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp EE-ECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEE
T ss_pred Ec-CCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCEEEEEE
Confidence 44 45534668899999 4444555654 489999999999988876433 2333333334555544 44689999999
Q ss_pred ccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEE-
Q psy12614 140 ISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTI- 217 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l- 217 (708)
..+.+.+......+ .+ ..++ +|++.|+.+..+ .|.++|..+.+.+.++.....+. .-..++.+.+. +|++
T Consensus 92 ~~tl~~~~ti~~~~-~G--wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~--~~~~lNeLe~~-~G~ly 163 (243)
T 3mbr_X 92 LATLTPRARFRYPG-EG--WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGR--PLDNLNELEWV-NGELL 163 (243)
T ss_dssp TTTTEEEEEEECSS-CC--CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTE--ECCCEEEEEEE-TTEEE
T ss_pred CCcCcEEEEEeCCC-Cc--eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCc--ccccceeeEEe-CCEEE
Confidence 99999874333332 22 3444 566666666556 99999999999999988753111 01344566665 7774
Q ss_pred EEEcCCCcEEEEeCCCCeeEEEeecc-------------ccCeEEEEEeCCCCEEEEEec
Q psy12614 218 ITGDSGGFVRFWDGKTGVQWSDVKTH-------------KKDILALTVSEDENYLYCAGV 264 (708)
Q Consensus 218 ~~~~~dg~i~~wd~~~~~~~~~~~~~-------------~~~i~~~~~s~~~~~l~~~~~ 264 (708)
+....+..|.+.|.++|+.+..+... ..-.+.++++|+++.|++.+.
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 44446789999999999998887522 124578999999888877764
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.82 E-value=5e-06 Score=87.55 Aligned_cols=192 Identities=10% Similarity=0.081 Sum_probs=120.8
Q ss_pred eCCEEEEEcC-CCcEEEEEC-CCCeEeEEEeecCCc-----------eEEEEEecCCCEEEEEeCCCcEEEEEccCCcEE
Q psy12614 80 FNDRLFSGGL-QGFVNEYDM-RRLNIKSSTAVTSGT-----------CWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146 (708)
Q Consensus 80 ~~~~l~s~~~-d~~i~vwd~-~~~~~~~~~~~~~~~-----------v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~ 146 (708)
.++.++.++. ++.|.-+|. .+|+.+..+...... -..+++ ++..+++++.|+.|..+|..+|+.+
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~ 138 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKIN 138 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence 3778888888 899999999 999998877633210 011233 3567888888999999999999998
Q ss_pred EEEecccccc--cEE-EEEECCCCCEEEEecC------C-eEEEEEcCCCceEEEEEecccCC-------------C---
Q psy12614 147 YEKLLDRQQG--RIL-CTAWHSSGDYLVTGCA------A-AVRVWDIHKGHAIHKMSLDKSSK-------------F--- 200 (708)
Q Consensus 147 ~~~~~~~~~~--~v~-~~~~s~d~~~l~~~~~------d-~i~iwd~~~~~~~~~~~~~~~~~-------------~--- 200 (708)
....+..+.. .+. +.... ++ .++.++. + .|..+|..+|+.+.++....... +
T Consensus 139 W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 139 WEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 6655543211 111 11111 44 4555543 6 99999999999998887542100 0
Q ss_pred -------------C-CceeE-EEEEEccC-CEEEEEcCC----------------CcEEEEeCCCCeeEEEeeccc----
Q psy12614 201 -------------S-KNTAV-WCVAFCAD-FTIITGDSG----------------GFVRFWDGKTGVQWSDVKTHK---- 244 (708)
Q Consensus 201 -------------~-~~~~v-~~~~~~~~-~~l~~~~~d----------------g~i~~wd~~~~~~~~~~~~~~---- 244 (708)
. ....+ ..+++.++ +.++.+..+ +.|..+|.++|+.+-.++...
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 0 00000 12455554 455555532 359999999999887765321
Q ss_pred -----cCeEEEEEeCCCC---EEEEEecCCeEEEEEccC
Q psy12614 245 -----KDILALTVSEDEN---YLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 245 -----~~i~~~~~s~~~~---~l~~~~~dg~i~iw~~~~ 275 (708)
....-+....+|+ .++.++.+|.++++|..+
T Consensus 297 d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 335 (571)
T 2ad6_A 297 DFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNREN 335 (571)
T ss_dssp CCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTT
T ss_pred ccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCC
Confidence 1111122234674 577888899999999988
No 266
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.80 E-value=3.9e-06 Score=75.57 Aligned_cols=188 Identities=12% Similarity=0.083 Sum_probs=127.7
Q ss_pred CcEEEEEEcCCCCEEEEEeCC--CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEE-EcCCCcEEEEECCCCeE
Q psy12614 27 KVINCIACEPKSSRLAVSRAD--QSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFS-GGLQGFVNEYDMRRLNI 103 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~d--g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s-~~~d~~i~vwd~~~~~~ 103 (708)
.-...+.|++ +.+..+.+.+ +.|+.+|+.+++.+. .+.-.. .---..++..++.|+. .-.++.+.++|.++.+.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~-~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQ-RAEVPP-PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEE-EEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTTEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEE-EEeCCC-CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE
Confidence 4577999987 4455555554 489999999999887 333222 0233556777555554 45789999999999999
Q ss_pred eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccc---ccEEEEEECCCCCEEEEecCC-eEE
Q psy12614 104 KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQ---GRILCTAWHSSGDYLVTGCAA-AVR 179 (708)
Q Consensus 104 ~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~s~d~~~l~~~~~d-~i~ 179 (708)
+.++...... + .+.+|+..|+++..++.|.++|.++.+.+.......+. ..++.+.|. +|+..+..-.+ .|.
T Consensus 98 ~~ti~~~~~G-w--glt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~ 173 (243)
T 3mbr_X 98 RARFRYPGEG-W--ALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIA 173 (243)
T ss_dssp EEEEECSSCC-C--EEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEEEeCCCCc-e--EEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEE
Confidence 9998854322 3 34467787877777899999999998877433333222 245566765 66655544445 999
Q ss_pred EEEcCCCceEEEEEecccCC------CCCceeEEEEEEccCC-EEEEEc
Q psy12614 180 VWDIHKGHAIHKMSLDKSSK------FSKNTAVWCVAFCADF-TIITGD 221 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~-~l~~~~ 221 (708)
+.|..+|+.+..+....-.. .......+.+|+.|++ +|++.+
T Consensus 174 vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 174 RIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 99999999999998653110 0123567899999977 544443
No 267
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.79 E-value=7.3e-06 Score=86.15 Aligned_cols=193 Identities=10% Similarity=0.093 Sum_probs=124.4
Q ss_pred CCEEEEEcC-CCcEEEEEC-CCCeEeEEEeecCCc-----------eEEEEEecCCCE----EEEEeCCCcEEEEEccCC
Q psy12614 81 NDRLFSGGL-QGFVNEYDM-RRLNIKSSTAVTSGT-----------CWCLSVHKKKRL----LAAGTEQGHINLFQISDE 143 (708)
Q Consensus 81 ~~~l~s~~~-d~~i~vwd~-~~~~~~~~~~~~~~~-----------v~~~~~s~~~~~----la~~~~d~~i~iwd~~~~ 143 (708)
++.+++++. ++.|.-+|. .+|+.+.++...... ...++++|.+.. |++++.|+.|..+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 778888888 899999999 999998887643221 133566554445 888889999999999999
Q ss_pred cEEEEEecccccc--cEE-EEEECCCCCEEEEec------CC-eEEEEEcCCCceEEEEEecccCC-------CC-----
Q psy12614 144 GLLYEKLLDRQQG--RIL-CTAWHSSGDYLVTGC------AA-AVRVWDIHKGHAIHKMSLDKSSK-------FS----- 201 (708)
Q Consensus 144 ~~~~~~~~~~~~~--~v~-~~~~s~d~~~l~~~~------~d-~i~iwd~~~~~~~~~~~~~~~~~-------~~----- 201 (708)
+.+....+..+.. .+. ..... ++ .+++++ .+ .|+.+|.++|+.+.++....... +.
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 9987655543211 111 11111 34 455554 36 99999999999998887542100 00
Q ss_pred ------------------CceeEE-EEEEccC-CEEEEEcCC----------------CcEEEEeCCCCeeEEEeecccc
Q psy12614 202 ------------------KNTAVW-CVAFCAD-FTIITGDSG----------------GFVRFWDGKTGVQWSDVKTHKK 245 (708)
Q Consensus 202 ------------------~~~~v~-~~~~~~~-~~l~~~~~d----------------g~i~~wd~~~~~~~~~~~~~~~ 245 (708)
....++ .+++.++ +.++.+..+ +.|..+|.++|+.+-.++....
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 000011 2445554 356666654 3799999999998877654221
Q ss_pred ---------CeEEEEEe-CCC---CEEEEEecCCeEEEEEccC
Q psy12614 246 ---------DILALTVS-EDE---NYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 246 ---------~i~~~~~s-~~~---~~l~~~~~dg~i~iw~~~~ 275 (708)
...-+... .+| ..++.++.+|.++++|..+
T Consensus 300 d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t 342 (599)
T 1w6s_A 300 DEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTD 342 (599)
T ss_dssp CSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTT
T ss_pred ccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCC
Confidence 11112222 567 4677788999999999988
No 268
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.76 E-value=3.7e-05 Score=74.89 Aligned_cols=275 Identities=10% Similarity=0.109 Sum_probs=161.5
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEE-Ee--cCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCC
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRV-FI--GDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~-~~--~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~ 101 (708)
....+.+++|.+++..+|+| ..|.| +...+.++.=... +. ... ..+.+|.|..+.++.++..+.|.. ..+.|
T Consensus 34 ~~~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~--~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG 108 (327)
T 2xbg_A 34 TTATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTLVLDHSD--YRFNSVSFQGNEGWIVGEPPIMLH-TTDGG 108 (327)
T ss_dssp CSSCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCC--CEEEEEEEETTEEEEEEETTEEEE-ESSTT
T ss_pred CCCcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCC--ccEEEEEecCCeEEEEECCCeEEE-ECCCC
Confidence 35679999999888888855 56655 3344434321111 11 123 578999998545555666675544 33334
Q ss_pred eEeEEEe---ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-e
Q psy12614 102 NIKSSTA---VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-A 177 (708)
Q Consensus 102 ~~~~~~~---~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~ 177 (708)
+.-..+. .+.+.+..+.+.+++..++++ .++.|.. ..+.++. ......+....+..+.+.|++.+++.+..+ .
T Consensus 109 ~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~t-W~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~ 185 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKN-WQALVQEAIGVMRNLNRSPSGEYVAVSSRGSF 185 (327)
T ss_dssp SSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSS-EEEEECSCCCCEEEEEECTTSCEEEEETTSSE
T ss_pred CCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCC-CEEeecCCCcceEEEEEcCCCcEEEEECCCcE
Confidence 3322222 123457788888777766654 4564432 2222322 113334456678999999999988877666 4
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec----cccCeEEEEEe
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT----HKKDILALTVS 253 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~----~~~~i~~~~~s 253 (708)
.+-+|- .+.....+... ....+..+++.++++++.++.+|.+++.+...|+....+.. ....+..+++.
T Consensus 186 ~~S~d~-gG~tW~~~~~~------~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~ 258 (327)
T 2xbg_A 186 YSTWEP-GQTAWEPHNRT------TSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYR 258 (327)
T ss_dssp EEEECT-TCSSCEEEECC------SSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEES
T ss_pred EEEeCC-CCCceeECCCC------CCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEec
Confidence 444442 13433333322 15668889999999877777788888775333444333321 22458889999
Q ss_pred CCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeC
Q psy12614 254 EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 254 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~ 329 (708)
+++..++++ .++.+ .+..+. |+ .|............+.++.+. +..++.++.+|.|..++-
T Consensus 259 ~~~~~~~~g-~~g~i-~~S~Dg--------G~-----tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 259 TPNEVWLAG-GAGAL-LCSQDG--------GQ-----TWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp SSSCEEEEE-STTCE-EEESST--------TS-----SCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CCCEEEEEe-CCCeE-EEeCCC--------Cc-----ccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 887766655 46766 344444 32 454322111233567788886 777888888998766543
No 269
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.73 E-value=9.6e-06 Score=79.13 Aligned_cols=239 Identities=11% Similarity=0.019 Sum_probs=144.8
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecc-----------------cccccEEEEEECC-CCCEEEEe
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLD-----------------RQQGRILCTAWHS-SGDYLVTG 173 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~-----------------~~~~~v~~~~~s~-d~~~l~~~ 173 (708)
....+++++++++++.++..++.|..|+..++......... .....+..+++.+ +++ |+.+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 34567899999987888888999999998876654211100 0123578999998 554 5555
Q ss_pred cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc-CCEEEEEcC------------------CCcEEEEeCCC
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA-DFTIITGDS------------------GGFVRFWDGKT 233 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~~~~~------------------dg~i~~wd~~~ 233 (708)
... .|..+|..++.. ..+...... ........+++.+ +|++..+.. +|.|..||..+
T Consensus 98 d~~~~i~~~d~~~g~~-~~~~~~~~~--~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHA-TQLATSVDG--VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp ETTTEEEEECTTCEEC-EEEESEETT--EECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred ECCCCEEEEeCCCCEE-EEecccCCC--CcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 445 788888765543 222211000 0023467899999 998655443 36799999877
Q ss_pred CeeEEEeeccccCeEEEEEeCCCCEEEEE-ecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-
Q psy12614 234 GVQWSDVKTHKKDILALTVSEDENYLYCA-GVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH- 311 (708)
Q Consensus 234 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~- 311 (708)
++...... .......++++|+++.|+.+ ...+.|..|++.. ... ........ ..+ ...+++.
T Consensus 175 ~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~--------~~~---~~~~~~~~---~~g-P~gi~~d~ 238 (322)
T 2fp8_A 175 KETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG--------PKK---GTAEVLVK---IPN-PGNIKRNA 238 (322)
T ss_dssp TEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS--------TTT---TCEEEEEE---CSS-EEEEEECT
T ss_pred CEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCC--------CcC---CccceEEe---CCC-CCCeEECC
Confidence 76433322 22345679999999877666 4568999999875 210 01111111 123 6778887
Q ss_pred -CCEEEEEcC----------CCeEEEEeCCCCceeecCcc----CCCCceEEEEcCCcEEEEE-cCCeEEEEEecC
Q psy12614 312 -GNRLYSGGL----------DSYLSLSYYPPKTLVKYPCT----LAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGS 371 (708)
Q Consensus 312 -~~~l~s~~~----------d~~i~iw~~~~~~~~~~~~~----~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~ 371 (708)
|++.++... .+.|..++.....+..+..+ ......+++ .++++.++. ..+.|..+++..
T Consensus 239 ~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 239 DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 665555443 46788888765555444422 223444544 466666654 677888888765
No 270
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.71 E-value=9.9e-06 Score=78.30 Aligned_cols=224 Identities=9% Similarity=-0.035 Sum_probs=138.5
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC--CcEEEEECCCCe
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ--GFVNEYDMRRLN 102 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d--~~i~vwd~~~~~ 102 (708)
.....++++|+|+++++-..++.|..||...+ ... .+. .. .....+++. ++.+++.... ..|..+|..+++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~-~~~-~~--~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQI-HAT-VE--GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEE-EEE-CS--SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEE-EEe-CC--CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 56789999999997777667899999998764 322 332 23 678999998 5644444332 247777888877
Q ss_pred EeEEEee-cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe--------cccccccEEEEEECCCCCEEEEe
Q psy12614 103 IKSSTAV-TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL--------LDRQQGRILCTAWHSSGDYLVTG 173 (708)
Q Consensus 103 ~~~~~~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~--------~~~~~~~v~~~~~s~d~~~l~~~ 173 (708)
....... .......++..+++..+++-..++.|+.+|..++....... ....-.....+ +||++.|+.+
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~ 184 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVS 184 (306)
T ss_dssp EEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEE
T ss_pred EEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEE
Confidence 5433321 12234556666655545544458889999887653211000 00111234455 7888877666
Q ss_pred cC-C-eEEEEEcCC-Cce--EEEEEecccCCCCCceeEEEEEEccCCEEEEEc-CCCcEEEEeCCCCeeEE--Eeecccc
Q psy12614 174 CA-A-AVRVWDIHK-GHA--IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGD-SGGFVRFWDGKTGVQWS--DVKTHKK 245 (708)
Q Consensus 174 ~~-d-~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~--~~~~~~~ 245 (708)
.. . .|..+++.. ++. ...+.. ......+++.++|++.++. ..+.|.++|.. ++... .+.....
T Consensus 185 d~~~~~I~~~~~~~~g~~~~~~~~~~--------~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~ 255 (306)
T 2p4o_A 185 NTEKMLLLRIPVDSTDKPGEPEIFVE--------QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVI 255 (306)
T ss_dssp ETTTTEEEEEEBCTTSCBCCCEEEEE--------SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCT
T ss_pred eCCCCEEEEEEeCCCCCCCccEEEec--------cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccC
Confidence 54 4 899999874 332 111111 1234568889999855554 46889999975 65532 3333335
Q ss_pred CeEEEEEe---CCCCEEEEEecCC
Q psy12614 246 DILALTVS---EDENYLYCAGVDP 266 (708)
Q Consensus 246 ~i~~~~~s---~~~~~l~~~~~dg 266 (708)
...+++|. |+++.|++++..+
T Consensus 256 ~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 256 GSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TEEEEEECCSTTTTTEEEEEECTT
T ss_pred CceEEEEecccCCCCEEEEECCCC
Confidence 68999998 8988888776543
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.68 E-value=2.3e-05 Score=71.83 Aligned_cols=204 Identities=10% Similarity=0.091 Sum_probs=139.1
Q ss_pred EecccccccEEEEEECCCCCEEEE-ecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE-EEcCCCc
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVT-GCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-TGDSGGF 225 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~-~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~dg~ 225 (708)
+.+.+-...+..++|+|++..|++ ...+ .|...|.. ++.++++.... ......+++.+++.++ +.-.++.
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g------~~D~EGIa~~~~g~~~vs~E~~~~ 92 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF------VKDLETIEYIGDNQFVISDERDYA 92 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS------CSSEEEEEECSTTEEEEEETTTTE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC------CCChHHeEEeCCCEEEEEECCCCc
Confidence 466677778999999998877765 4455 99999987 99888887642 3557788999999854 4456778
Q ss_pred EEEEeCCCCee---EEEee------ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeE
Q psy12614 226 VRFWDGKTGVQ---WSDVK------THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSV 296 (708)
Q Consensus 226 i~~wd~~~~~~---~~~~~------~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~ 296 (708)
+.++++..... +.... ..+.....++|+|+++.|+++.......+|.+.. ...+. ......
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g-----~~~~~-----~l~i~~ 162 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNG-----LLSSN-----ELHISK 162 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEES-----TTCSS-----CCEEEE
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcc-----cccCC-----ceeeec
Confidence 99988765432 22221 1345568999999998888887766666666642 00010 000000
Q ss_pred E--E--eccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecC---------ccCCCCceEEEEcCCcEEEEEc
Q psy12614 297 N--R--VIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYP---------CTLAQSTPVSLAKDIQHVLLQY 360 (708)
Q Consensus 297 ~--~--~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~---------~~~~~~~~~~~s~~~~~l~~~~ 360 (708)
. + ..+...+.+++++ +.+++....+..+..+|........+. ...+++..+++.++|++.+++.
T Consensus 163 ~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE 242 (255)
T 3qqz_A 163 DKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE 242 (255)
T ss_dssp CHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET
T ss_pred chhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcC
Confidence 0 0 1123467888988 778888888899999998877533222 1135677899999999888888
Q ss_pred CCeEEEEEe
Q psy12614 361 TSHLELWSL 369 (708)
Q Consensus 361 ~~~i~i~~~ 369 (708)
.+.++.+.-
T Consensus 243 ~n~~y~f~~ 251 (255)
T 3qqz_A 243 PNRFYRFTP 251 (255)
T ss_dssp TTEEEEEEC
T ss_pred CceEEEEEe
Confidence 887766653
No 272
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.66 E-value=4.2e-05 Score=80.59 Aligned_cols=193 Identities=11% Similarity=0.050 Sum_probs=118.6
Q ss_pred eCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCce---------EEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe
Q psy12614 80 FNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTC---------WCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL 150 (708)
Q Consensus 80 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v---------~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~ 150 (708)
.++.+++++.++.|.-+|..+|+.+..+....... ..+++ .+..+++++.++.|..+|..+|+......
T Consensus 67 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 67 SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred ECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 46777777764559999999999988876443210 12233 35578888899999999999999986655
Q ss_pred cccccc--cEE-EEEECC---CCC-EEEEecC------C-eEEEEEcCCCceEEEEEecccC-------------CCC--
Q psy12614 151 LDRQQG--RIL-CTAWHS---SGD-YLVTGCA------A-AVRVWDIHKGHAIHKMSLDKSS-------------KFS-- 201 (708)
Q Consensus 151 ~~~~~~--~v~-~~~~s~---d~~-~l~~~~~------d-~i~iwd~~~~~~~~~~~~~~~~-------------~~~-- 201 (708)
...+.. .+. ...... +++ .+++++. + .|..+|..+|+.+......... ..+
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCT
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccc
Confidence 543211 111 111111 233 5666542 5 8999999999998876532100 000
Q ss_pred -------------------CceeEEEEEEccCC-EEEEEcC--------------------C----CcEEEEeCCCCeeE
Q psy12614 202 -------------------KNTAVWCVAFCADF-TIITGDS--------------------G----GFVRFWDGKTGVQW 237 (708)
Q Consensus 202 -------------------~~~~v~~~~~~~~~-~l~~~~~--------------------d----g~i~~wd~~~~~~~ 237 (708)
....-..+++.|+. .++.+.. | +.|..+|..+|+.+
T Consensus 225 ~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~ 304 (582)
T 1flg_A 225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK 304 (582)
T ss_dssp TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred cCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence 00000134566554 5544432 2 58999999999988
Q ss_pred EEeec--cc--------cCeEEEEEe-CCCC---EEEEEecCCeEEEEEccC
Q psy12614 238 SDVKT--HK--------KDILALTVS-EDEN---YLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 238 ~~~~~--~~--------~~i~~~~~s-~~~~---~l~~~~~dg~i~iw~~~~ 275 (708)
-.++. |. .++ -+... .+|+ .++.++.+|.++++|..+
T Consensus 305 W~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 305 WFYQHTPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp EEEESSTTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred EEEeCCCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 77653 21 111 12222 4674 788899999999999988
No 273
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.63 E-value=0.0019 Score=73.51 Aligned_cols=479 Identities=11% Similarity=0.059 Sum_probs=243.5
Q ss_pred CcEEEEECCCCeEeEEEeec-CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC---
Q psy12614 91 GFVNEYDMRRLNIKSSTAVT-SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS--- 166 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d--- 166 (708)
..|++.+...+..+..+... +..|...+.+. .+++.++ .+.+.++++..+++..... ..-...|.|+++.|.
T Consensus 492 ~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~-~~l~~evscl~i~~~~~~ 567 (1158)
T 3ei3_A 492 ASVRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISH-TEMEHEVACLDITPLGDS 567 (1158)
T ss_dssp SCEEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEE-EECSSCEEEEECCCCSSS
T ss_pred CEEEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecc-cCCCCceEEEEeecCCCC
Confidence 34667776665556555533 33576666553 4666664 6788888888765442222 223567999999864
Q ss_pred ---CCEEEEecC-C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc-CC--EEEEEcCCCcEEEEeC--CCCee
Q psy12614 167 ---GDYLVTGCA-A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA-DF--TIITGDSGGFVRFWDG--KTGVQ 236 (708)
Q Consensus 167 ---~~~l~~~~~-d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~--~l~~~~~dg~i~~wd~--~~~~~ 236 (708)
+++++.|.. | +++|+++.+.+.+.....+. .....++.+.. ++ .+..|-.||.+..+.+ .+|+.
T Consensus 568 ~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~------~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l 641 (1158)
T 3ei3_A 568 NGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG------EIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLL 641 (1158)
T ss_dssp TTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS------SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCE
T ss_pred cccccEEEEEECCCCEEEEEECCCCCeEEEEECCC------CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCcc
Confidence 478999986 7 99999999877776555432 22333333322 33 3778889998765544 45544
Q ss_pred EEE--eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEE-EEe--
Q psy12614 237 WSD--VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSL-ALH-- 311 (708)
Q Consensus 237 ~~~--~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l-~~~-- 311 (708)
... ..-...++.-..+...+..-+.+..++...+|..+. . .... .-....+..+ .|+
T Consensus 642 ~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~---------~-------l~~s--~l~~~~v~~~~~F~se 703 (1158)
T 3ei3_A 642 SDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNH---------K-------LVFS--NVNLKEVNYMCPLNSD 703 (1158)
T ss_dssp EEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESSS---------S-------EEEE--EBSSSCCCEEEEECCS
T ss_pred ccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcCC---------c-------eEEe--ccChHHhceEeccCcc
Confidence 322 111234554444544444434444455555554333 1 1111 1112233333 243
Q ss_pred --CCEEEEEcCCCeEEEEeCCCCc---eeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCC---C--------
Q psy12614 312 --GNRLYSGGLDSYLSLSYYPPKT---LVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQS---T-------- 375 (708)
Q Consensus 312 --~~~l~s~~~d~~i~iw~~~~~~---~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~---~-------- 375 (708)
.+-++..+ ++.++|..++... .++++ -...+..++++|+.+.++...... ..++...... .
T Consensus 704 ~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 780 (1158)
T 3ei3_A 704 GYPDSLALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRI-EVQDTSGGTTALRPSASTQALS 780 (1158)
T ss_dssp SSTTEEEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEE-EEECSSSSEEESSCCHHHHCSE
T ss_pred cCCCcEEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEec-cccccccccchhhhhhhhhhhh
Confidence 34555444 4558888775432 33333 233556788888877665432111 1111100000 0
Q ss_pred ----------CCC-------CC--CCCCcccCCCCceE-EEEEEecCCCceEEEE---eCCC-CcEEEEEc---------
Q psy12614 376 ----------DLS-------SH--SNTTGVPLLSFPRL-IVKMSAVNNATIRCSV---VSND-GKYVAYST--------- 422 (708)
Q Consensus 376 ----------~~~-------~~--~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~---~s~~-g~~l~~~~--------- 422 (708)
... +. ....+..+++.... +..........+.+++ |..+ ..++++|+
T Consensus 781 ~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~ 860 (1158)
T 3ei3_A 781 SSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAE 860 (1158)
T ss_dssp EEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSS
T ss_pred hcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCC
Confidence 000 00 00001111111111 1222223344455554 3332 46787653
Q ss_pred --CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccC
Q psy12614 423 --ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMS 499 (708)
Q Consensus 423 --d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~ 499 (708)
.|.|.+|++.. .+ ++.+.+.+- ...+++++-- +|++|+ +-.... +|++.... .+. ... .+ .
T Consensus 861 ~~~Gri~vf~v~~--~k--L~lv~~~~v---~g~v~al~~~-~g~Lla-~ig~~l~vy~l~~~~--~L~-~~~--~~--~ 924 (1158)
T 3ei3_A 861 PKQGRIVVFQYSD--GK--LQTVAEKEV---KGAVYSMVEF-NGKLLA-SINSTVRLYEWTTEK--ELR-TEC--NH--Y 924 (1158)
T ss_dssp CCCEEEEEEEEET--TE--EEEEEEEEE---SSCEEEEEEE-TTEEEE-EETTEEEEEEECTTS--CEE-EEE--EE--C
T ss_pred CCceEEEEEEEEC--CE--EEEEEEEEc---CCcCEEEeee-CCEEEE-EcCCEEEEEECCCCc--eEE-EEe--ec--c
Confidence 36799999983 33 332221111 2244444422 455444 433333 89887652 222 110 00 1
Q ss_pred cceEEEEECCCCcEEEEEecCCeEEEEECC--c-eeee--cCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCC
Q psy12614 500 DVISLVQMSECKQYIVCADRKSHVVIWKNG--Q-HHAS--LPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFT 574 (708)
Q Consensus 500 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~--~-~~~~--~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~ 574 (708)
..|..+.....+.++++|+.-..|.++..+ . .... -..+...++++.|-.+ ..++.++.+|.+.+...+.....
T Consensus 925 ~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~~~~~ 1003 (1158)
T 3ei3_A 925 NNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDSAATT 1003 (1158)
T ss_dssp CCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECTTCCS
T ss_pred ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCCCCCC
Confidence 123333333367899999977777776554 2 1111 1334567889988755 46777999999999988764333
Q ss_pred chhhhhhccCchhhhcCCCCeeEEE---eCCCC---------CceEEEEcCeeEEEE
Q psy12614 575 TFSRKLETNHPNEWLSRQLPVLGIE---FDPQD---------SSLIYLMDDSALCVI 619 (708)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~i~~l~---~s~~~---------~~l~~~~~d~~i~~w 619 (708)
.+.+.. ......+ -..+.|+++. +.+.+ ..++.++.+|.|.+.
T Consensus 1004 ~~~~~~-L~~~~~f-hlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A 1004 DEERQH-LQEVGLF-HLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp TTGGGB-EEEEEEE-ECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred ccccce-eeeEEEE-eCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEE
Confidence 221100 0011111 1234566665 33332 347788889998876
No 274
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.62 E-value=6.2e-05 Score=68.98 Aligned_cols=218 Identities=13% Similarity=0.076 Sum_probs=142.9
Q ss_pred Cccceeeeee-eeccCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEE-E
Q psy12614 10 TMGTYGVHNI-KFYAPEPKVINCIACEPKSSRLA-VSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRL-F 85 (708)
Q Consensus 10 ~~~~~~~~~~-~~~~~h~~~v~~~~~s~~~~~la-~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l-~ 85 (708)
.+..+++.-. +-+.+-.+.+..++++|+++.|. +...++.|...|.. ++.+.+.-.+-. .....|++. ++.+ +
T Consensus 9 ~l~~y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~--~D~EGIa~~~~g~~~v 85 (255)
T 3qqz_A 9 SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV--KDLETIEYIGDNQFVI 85 (255)
T ss_dssp CCTTCEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC--SSEEEEEECSTTEEEE
T ss_pred CccceEEEEeceECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC--CChHHeEEeCCCEEEE
Confidence 4555666554 56778878999999999876554 57778899999998 777663322323 578999998 4444 5
Q ss_pred EEcCCCcEEEEECCCCeE---eEEEe------ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC----CcEEEEEe--
Q psy12614 86 SGGLQGFVNEYDMRRLNI---KSSTA------VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD----EGLLYEKL-- 150 (708)
Q Consensus 86 s~~~d~~i~vwd~~~~~~---~~~~~------~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~----~~~~~~~~-- 150 (708)
+.-.++.+.++++..... +.... ........++|+|+++.|.++.+.....+|.+.. ........
T Consensus 86 s~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~ 165 (255)
T 3qqz_A 86 SDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKA 165 (255)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHH
T ss_pred EECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchh
Confidence 555678899998766442 22221 1234468999999998888777766666666652 11211011
Q ss_pred c--ccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCC--CCCceeEEEEEEccCCEEEEEcCCC
Q psy12614 151 L--DRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSK--FSKNTAVWCVAFCADFTIITGDSGG 224 (708)
Q Consensus 151 ~--~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~l~~~~~dg 224 (708)
+ ..+...+.++++.|....|+..+.. .+..+|.. |+.+..+......+ ...-.....|+|.++|++...+..+
T Consensus 166 ~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n 244 (255)
T 3qqz_A 166 LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN 244 (255)
T ss_dssp HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT
T ss_pred hccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc
Confidence 1 1123457899999987666655554 89999965 67777777653111 0012467899999999877777777
Q ss_pred cEEEEeC
Q psy12614 225 FVRFWDG 231 (708)
Q Consensus 225 ~i~~wd~ 231 (708)
.++.+.-
T Consensus 245 ~~y~f~~ 251 (255)
T 3qqz_A 245 RFYRFTP 251 (255)
T ss_dssp EEEEEEC
T ss_pred eEEEEEe
Confidence 7776653
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.54 E-value=9.5e-05 Score=73.76 Aligned_cols=233 Identities=9% Similarity=-0.028 Sum_probs=145.9
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCCcEEEEECCCCeE
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQGFVNEYDMRRLNI 103 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~vwd~~~~~~ 103 (708)
+.-+|.+..+. .+|+.+. ...|+..++..+.... ...+. ..+.+++|. ++.|+ +-...+.|..+++..+..
T Consensus 77 d~~~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~-~~~~~---~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~ 150 (386)
T 3v65_B 77 DRRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTL-LLNNL---ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV 150 (386)
T ss_dssp TSSCEEECSSC-CEEEEEC-BSCEEEECTTSCCCEE-EECSC---SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE
T ss_pred CCCeECCcccc-ceeEeec-CccceeeccCCCcEEE-EecCC---CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc
Confidence 34556666663 4555543 4579999988766543 44433 568899999 55555 445678899999987664
Q ss_pred eEEEeecCCceEEEEEecCCCEEEEE-eCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC---eEE
Q psy12614 104 KSSTAVTSGTCWCLSVHKKKRLLAAG-TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA---AVR 179 (708)
Q Consensus 104 ~~~~~~~~~~v~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d---~i~ 179 (708)
...+.........+++.+.+..|..+ ...+.|.+.++...... ..+...-.....+++.|.+..|+.+... .|.
T Consensus 151 ~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~--~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~ 228 (386)
T 3v65_B 151 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK--VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIE 228 (386)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE--EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred EEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE--EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEE
Confidence 44443333456789999866655544 44678888888765543 2233333567899999987777655432 677
Q ss_pred EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEE-EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCC
Q psy12614 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TII-TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDEN 257 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~ 257 (708)
..++.. .....+... .......++++|++ +|. +-...+.|..+|+........+.........+++. ++.
T Consensus 229 r~~~dG-~~~~~~~~~------~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ 300 (386)
T 3v65_B 229 ASSMDG-SGRRIIADT------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDS 300 (386)
T ss_dssp EEETTS-CSCEEEECS------SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTE
T ss_pred EEeCCC-CCcEEEEEC------CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCE
Confidence 777653 333333221 14457899999755 554 44556789999986443333333334456778883 444
Q ss_pred EEEEEecCCeEEEEEccC
Q psy12614 258 YLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 258 ~l~~~~~dg~i~iw~~~~ 275 (708)
.+++-...+.|..++..+
T Consensus 301 ly~td~~~~~V~~~~~~~ 318 (386)
T 3v65_B 301 LYWTDWHTKSINSANKFT 318 (386)
T ss_dssp EEEEETTTTEEEEEETTT
T ss_pred EEEeeCCCCeEEEEECCC
Confidence 445555567888888655
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.53 E-value=0.00016 Score=70.96 Aligned_cols=235 Identities=9% Similarity=-0.022 Sum_probs=147.0
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEE-cCCCcEEEEECCCC
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSG-GLQGFVNEYDMRRL 101 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~-~~d~~i~vwd~~~~ 101 (708)
+++..+|.+..++. +|..+. ...|+..++....... .+.+. ..+.+++|. ++.|+.+ ...+.|..+++..+
T Consensus 32 ~~d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~-~~~~~---~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~ 105 (349)
T 3v64_C 32 RPDRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTL-LLNNL---ENAIALDFHHRRELVFWSDVTLDRILRANLNGS 105 (349)
T ss_dssp CTTSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEE-EECSC---SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCCcccccccCc-eeEeec-ccceEEEeCCCCeeEE-eecCC---CceEEEEEeccccEEEEEeccCCceEEEecCCC
Confidence 35567788887744 555543 3468888887665432 44433 468999998 5555544 56788999999876
Q ss_pred eEeEEEeecCCceEEEEEecCCCEEEE-EeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC---e
Q psy12614 102 NIKSSTAVTSGTCWCLSVHKKKRLLAA-GTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA---A 177 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d---~ 177 (708)
.....+.........+++.+.+..|.. -...+.|.+.+....... ..+...-.....+++.|.+..|+..... .
T Consensus 106 ~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~--~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~ 183 (349)
T 3v64_C 106 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK--VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR 183 (349)
T ss_dssp SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECTTCSCEEEEEEETTTTEEEEEECSSSCE
T ss_pred CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE--EEEeCCCCCcceEEEecCcCeEEEeccCCCCE
Confidence 544433333345678999986655544 445678999998866543 2233334567899999977666655432 6
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEE-EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TII-TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED 255 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~ 255 (708)
|...++.. .....+... .......++++|++ +|. +-...+.|..+|+........+.........+++. +
T Consensus 184 I~r~~~dG-~~~~~~~~~------~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~ 255 (349)
T 3v64_C 184 IEASSMDG-SGRRIIADT------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-E 255 (349)
T ss_dssp EEEEETTS-CSCEESCCS------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-T
T ss_pred EEEEeCCC-CCcEEEEEC------CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-C
Confidence 77777653 333322211 14457899999755 654 44556789999986433333333334456778873 4
Q ss_pred CCEEEEEecCCeEEEEEccC
Q psy12614 256 ENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 256 ~~~l~~~~~dg~i~iw~~~~ 275 (708)
+...++-...+.|..++..+
T Consensus 256 ~~ly~td~~~~~V~~~~~~~ 275 (349)
T 3v64_C 256 DSLYWTDWHTKSINSANKFT 275 (349)
T ss_dssp TEEEEEETTTTEEEEEETTT
T ss_pred CEEEEecCCCCeEEEEEccC
Confidence 44444444567788887555
No 277
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.52 E-value=0.00019 Score=69.26 Aligned_cols=231 Identities=16% Similarity=0.116 Sum_probs=139.0
Q ss_pred eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC---eE
Q psy12614 102 NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA---AV 178 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d---~i 178 (708)
+.+..+.. ......++|+++++++++-..++.|..||..+.... .+. .......+++.++|+++++.... .|
T Consensus 23 ~~~~~~p~-~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~---~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v 97 (306)
T 2p4o_A 23 KIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQI---HAT-VEGKVSGLAFTSNGDLVATGWNADSIPV 97 (306)
T ss_dssp EEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEE---EEE-CSSEEEEEEECTTSCEEEEEECTTSCEE
T ss_pred eEeEeCCC-CCCcceEEECCCCCEEEEeCCCCeEEEECCCCceEE---EEe-CCCCceeEEEcCCCcEEEEeccCCcceE
Confidence 34444432 256788999999987666667889999998764322 221 23568899999999976665432 47
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEE-cCCCcEEEEeCCCCee-EEEee---------ccccCe
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITG-DSGGFVRFWDGKTGVQ-WSDVK---------THKKDI 247 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~-~~~~~---------~~~~~i 247 (708)
..+|..+++......... ......++..+++.+++. ..++.|+++|..+++. +.... ..-...
T Consensus 98 ~~~d~~~g~~~~~~~~~~------~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~p 171 (306)
T 2p4o_A 98 VSLVKSDGTVETLLTLPD------AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAA 171 (306)
T ss_dssp EEEECTTSCEEEEEECTT------CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSE
T ss_pred EEEcCCCCeEEEEEeCCC------ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcC
Confidence 777877877644333221 223455566667764444 4588999999876532 21110 111233
Q ss_pred EEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeE
Q psy12614 248 LALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYL 324 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i 324 (708)
..+ ++++++|+.+. ..+.|..|++... +. ... ...+. .......++++ |+++++....+.|
T Consensus 172 ngi--s~dg~~lyv~d~~~~~I~~~~~~~~-------g~-~~~-----~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V 235 (306)
T 2p4o_A 172 NGL--KRFGNFLYVSNTEKMLLLRIPVDST-------DK-PGE-----PEIFV-EQTNIDDFAFDVEGNLYGATHIYNSV 235 (306)
T ss_dssp EEE--EEETTEEEEEETTTTEEEEEEBCTT-------SC-BCC-----CEEEE-ESCCCSSEEEBTTCCEEEECBTTCCE
T ss_pred CCc--CcCCCEEEEEeCCCCEEEEEEeCCC-------CC-CCc-----cEEEe-ccCCCCCeEECCCCCEEEEeCCCCeE
Confidence 455 78887776665 4678999998640 11 000 01111 11345567777 6666666667889
Q ss_pred EEEeCCCCc--eeecCccCCCCceEEEE---cCCcEEEEE
Q psy12614 325 SLSYYPPKT--LVKYPCTLAQSTPVSLA---KDIQHVLLQ 359 (708)
Q Consensus 325 ~iw~~~~~~--~~~~~~~~~~~~~~~~s---~~~~~l~~~ 359 (708)
.+++..... +..+..+...+.++++. ++++.|.+.
T Consensus 236 ~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt 275 (306)
T 2p4o_A 236 VRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVV 275 (306)
T ss_dssp EEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred EEECCCCCEEEEeecccccCCceEEEEecccCCCCEEEEE
Confidence 999986443 22333334567788898 787666554
No 278
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.51 E-value=0.00025 Score=68.53 Aligned_cols=206 Identities=11% Similarity=0.024 Sum_probs=130.0
Q ss_pred CCcEEEEEEcCCCCEEEEE-eCCCcEEEEeCCC---CCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEEC
Q psy12614 26 PKVINCIACEPKSSRLAVS-RADQSIEIWDISE---TPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDM 98 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~-~~dg~v~iwd~~~---~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~ 98 (708)
-..+..++|++++..|..+ ..++.|..+++.. +......+.... .....+++. ++.| ++-...+.|.+.++
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~--~~p~glavd~~~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC--SCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC--CCcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence 4567899999977666655 4468899999876 122222343332 345788887 5555 45567889999998
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC--CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ--GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
........+.........++++|.+..|..+... +.|...+....... ......-.....+++++++..|+.+...
T Consensus 107 ~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~--~~~~~~~~~P~gla~d~~~~~lY~~D~~ 184 (316)
T 1ijq_A 107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--SLVTENIQWPNGITLDLLSGRLYWVDSK 184 (316)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE--EEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE--EEEECCCCCceEEEEeccCCEEEEEECC
Confidence 8654443344344678899999977766655542 67888888655442 1222233567899999988888776654
Q ss_pred --eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 177 --AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 177 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
.|..+|+.. .....+.... ........+++.. +. +++-...+.|..++..+|+.+..+.
T Consensus 185 ~~~I~~~d~dg-~~~~~~~~~~----~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 185 LHSISSIDVNG-GNRKTILEDE----KRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp TTEEEEEETTS-CSCEEEEECT----TTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CCeEEEEecCC-CceEEEeecC----CccCCcEEEEEEC-CEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 899999864 3333333211 0123456777753 55 5566667889999877776655553
No 279
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.49 E-value=0.0002 Score=70.33 Aligned_cols=202 Identities=8% Similarity=-0.052 Sum_probs=129.8
Q ss_pred CcEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEECCCCe
Q psy12614 27 KVINCIACEPKSSRLAVS-RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~-~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~~ 102 (708)
..+..++|++.+..|... ...+.|..+++..+.... .+.... .....+++. ++.| ++-...+.|.+.+++...
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~-~~~~~~--~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE-VVSTGL--ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-EECSSC--SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceE-EEeCCC--CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence 446789999876666655 456789999988765433 333322 345677777 4444 555667899999987654
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeC-C-CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTE-Q-GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AV 178 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i 178 (708)
....+.........++++|.+..|..... . +.|..++....... ......-.....++++|++..|+.+... .|
T Consensus 150 ~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~--~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I 227 (349)
T 3v64_C 150 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR--IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 227 (349)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE--ESCCSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE--EEEECCCCCcceEEEeCCCCEEEEEECCCCEE
Confidence 33333333456789999997666655443 4 77888888765543 2222234567899999988877776654 89
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
..+|+.. .....+.... ......+++. ++. +++-...+.|..++..+|+....+.
T Consensus 228 ~~~~~dG-~~~~~~~~~~------~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 228 ERANLDG-SHRKAVISQG------LPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EEEETTS-CSCEEEECSS------CSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEeCCC-CceEEEEeCC------CCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 9999864 3333332211 3345677773 444 5555667788888866676555554
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.46 E-value=0.00038 Score=69.65 Aligned_cols=219 Identities=11% Similarity=0.045 Sum_probs=139.8
Q ss_pred CCCcEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCC---eEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCCcEEEEE
Q psy12614 25 EPKVINCIACEPKSSRLAVSR-ADQSIEIWDISETP---HVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQGFVNEYD 97 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~-~dg~v~iwd~~~~~---~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~vwd 97 (708)
....+..++|++.+..|.... ..+.|..+++.... .....+.... .....|++. ++.|+ +-...+.|.+.+
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~--~~p~glavD~~~~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDWIHSNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC--SCEEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC--CCcccEEEEecCCceEEEECCCCeEEEEe
Confidence 345788999998776666654 46788889887521 1222333333 567888888 45554 556678999999
Q ss_pred CCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC
Q psy12614 98 MRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA 175 (708)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 175 (708)
++.......+.........|++.|.+.+|+.... .+.|...++...... ......-.....|++++++..|+.+..
T Consensus 188 ~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~--~~~~~~l~~P~glavd~~~~~lY~aD~ 265 (400)
T 3p5b_L 188 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--SLVTENIQWPNGITLDLLSGRLYWVDS 265 (400)
T ss_dssp TTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE--EEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE--EEEECCCCceEEEEEEeCCCEEEEEEC
Confidence 8876555445444556889999997777766542 367888888765543 222333356789999998888887765
Q ss_pred C--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEE
Q psy12614 176 A--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252 (708)
Q Consensus 176 d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~ 252 (708)
. .|..+|+... ....+.... ........+++..+.-+++-...+.|..+|..+|+.+..+.........+.+
T Consensus 266 ~~~~I~~~d~dG~-~~~~~~~~~----~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 266 KLHSISSIDVNGG-NRKTILEDE----KRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 339 (400)
T ss_dssp TTTEEEEEETTSC-CCEEEEECS----STTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred CCCEEEEEeCCCC-ccEEEEeCC----CCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEE
Confidence 4 8999998643 333333221 1123455777744433556667788999997778776666543333444443
No 281
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.44 E-value=0.00011 Score=74.35 Aligned_cols=151 Identities=11% Similarity=0.015 Sum_probs=98.8
Q ss_pred ceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC-----C-eEEEEEcCC
Q psy12614 113 TCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-----A-AVRVWDIHK 185 (708)
Q Consensus 113 ~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~-----d-~i~iwd~~~ 185 (708)
....++++| ++..|.++...+.|+.+|..++.+. .+.........++|++++++|+.+.. . .+...+. .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~---~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS---TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-E 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE---EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-G
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE---EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-C
Confidence 457899998 4556666665588999999887764 22234556889999999996666654 2 3444443 3
Q ss_pred CceE--EEEEecccCCCCCceeEEEEEEcc-CCEEE-EEcCCCcEEEEeCCCCeeEEEeec-cccCeEEEEEeCCCCEEE
Q psy12614 186 GHAI--HKMSLDKSSKFSKNTAVWCVAFCA-DFTII-TGDSGGFVRFWDGKTGVQWSDVKT-HKKDILALTVSEDENYLY 260 (708)
Q Consensus 186 ~~~~--~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~ 260 (708)
+... ..+.. ......+++.| +|.++ +-..++.|..++...+........ .......++|+|++++|+
T Consensus 214 g~~~~~~~l~~--------~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 214 SGFKVITELTK--------GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp GTSCSEEEEEE--------CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred Cceeeeeeecc--------CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEE
Confidence 3322 22221 23356788999 67755 445678999999887654222221 223567899999999666
Q ss_pred EEe-cCCeEEEEEccC
Q psy12614 261 CAG-VDPTVVCFQRTR 275 (708)
Q Consensus 261 ~~~-~dg~i~iw~~~~ 275 (708)
.+. ..+.|..++...
T Consensus 286 v~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 286 IVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEETTTTEEEEEEEET
T ss_pred EEECCCCEEEEEeCCc
Confidence 554 567899988764
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.41 E-value=3.8e-05 Score=82.98 Aligned_cols=273 Identities=13% Similarity=0.042 Sum_probs=151.1
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------cEEEEeCCCCCeEE-EEEe-cCCCCCcEEEEEEe--CCEEEEEcC-CCcE
Q psy12614 31 CIACEP-KSSRLAVSRADQ-----------SIEIWDISETPHVD-RVFI-GDPLSNSIECLTWF--NDRLFSGGL-QGFV 93 (708)
Q Consensus 31 ~~~~s~-~~~~la~~~~dg-----------~v~iwd~~~~~~~~-~~~~-~h~~~~~v~~l~~~--~~~l~s~~~-d~~i 93 (708)
++++.| ++++++.|+.+. .+.+||..+++... ..+. .+. ....++++. +..++.|+. ++.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~--~~~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD--MFCPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC--CSSCEEEECTTSCEEEECSSSTTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC--CccccccCCCCCCEEEeCCCCCCce
Confidence 567777 889999887543 58999999876432 1222 222 333445655 777788874 5689
Q ss_pred EEEECCCCeEeEEEeecCC-ceEEEEEecCCCEEEEEe-CC-----CcEEEEEccCCcEEEEEec--ccccccEEEEEEC
Q psy12614 94 NEYDMRRLNIKSSTAVTSG-TCWCLSVHKKKRLLAAGT-EQ-----GHINLFQISDEGLLYEKLL--DRQQGRILCTAWH 164 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~la~~~-~d-----~~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~s 164 (708)
.+||..+.+-...-..+.. .-.+++..++++.++.|+ .+ ..+.+||..++........ ......-....+.
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceee
Confidence 9999888754322121212 223566677999999988 34 5699999998876521000 0000000001122
Q ss_pred CCCCEEEEec----------CCeEEEEEcCCCceEEEEEecccC---CCCCceeEEEEEEcc-CCE-EEEEcCCC-----
Q psy12614 165 SSGDYLVTGC----------AAAVRVWDIHKGHAIHKMSLDKSS---KFSKNTAVWCVAFCA-DFT-IITGDSGG----- 224 (708)
Q Consensus 165 ~d~~~l~~~~----------~d~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~-~~~-l~~~~~dg----- 224 (708)
.++...+.++ .+.+..||..+............. . .....-.++.|.. +++ ++.|+.++
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~-~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVA-PDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEEC-CCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccC-CCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 3333333332 226889998887655433322100 0 0011223444433 666 56666432
Q ss_pred ------cEEEEeCCCCeeEEEe--eccccC-eEEEEEeCCCCEEEEEecC-----------CeEEEEEccCCcccccCCC
Q psy12614 225 ------FVRFWDGKTGVQWSDV--KTHKKD-ILALTVSEDENYLYCAGVD-----------PTVVCFQRTRKPQVCSTSG 284 (708)
Q Consensus 225 ------~i~~wd~~~~~~~~~~--~~~~~~-i~~~~~s~~~~~l~~~~~d-----------g~i~iw~~~~~~~~~~~~g 284 (708)
.|.+||..+.+-.... ..+... -.+++..|+++.++.|+.+ ..+.+||..+ +
T Consensus 427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t--------~ 498 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ--------D 498 (656)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG--------T
T ss_pred cCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC--------C
Confidence 6788888776544332 112222 2355677899999998864 4688999877 3
Q ss_pred CCCCCcceEEeEEEeccccceEEEEE--eCCEEEEEcC
Q psy12614 285 PEQGSSVWVRSVNRVIHEGDVKSLAL--HGNRLYSGGL 320 (708)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~l~s~~~ 320 (708)
+|.....+........+..+ .++.++.||.
T Consensus 499 ------~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 499 ------TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp ------EEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ------ceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 45544333222222223333 2778888774
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.41 E-value=0.00017 Score=72.96 Aligned_cols=239 Identities=10% Similarity=0.032 Sum_probs=138.0
Q ss_pred cEEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCC-----cEEEEEC
Q psy12614 28 VINCIACEPK--SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQG-----FVNEYDM 98 (708)
Q Consensus 28 ~v~~~~~s~~--~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~-----~i~vwd~ 98 (708)
....++++|+ +..|.++...+.|+.+|..++... .+.+.. .....++++ ++ |+.+...+ .+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~--~~~~~~--~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD--IKTTNI--GQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE--EECCCC--SCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE--EeecCC--CCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 4568999995 445555544489999999877654 334444 678999999 66 55554321 2333332
Q ss_pred CCCeEe-EEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC-
Q psy12614 99 RRLNIK-SSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA- 175 (708)
Q Consensus 99 ~~~~~~-~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~- 175 (708)
..+... ..+. .......++++| +|.+.++-..++.|+.+|..++.........+....-..++|+|++++|+.+..
T Consensus 215 ~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 215 ASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp GGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred CCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 222110 1122 234567789999 666555555678899999887766211111112233357999999996666554
Q ss_pred C-eEEEEEcC--CCce--EEEEEec--ccCC------CCCceeEEEEEE---------ccCCEEEEE-cCCCcEEEEeCC
Q psy12614 176 A-AVRVWDIH--KGHA--IHKMSLD--KSSK------FSKNTAVWCVAF---------CADFTIITG-DSGGFVRFWDGK 232 (708)
Q Consensus 176 d-~i~iwd~~--~~~~--~~~~~~~--~~~~------~~~~~~v~~~~~---------~~~~~l~~~-~~dg~i~~wd~~ 232 (708)
. .|..++.. ++.. ...+... ..+. ...-.....+++ .++|.|..+ ...+.|+.++.
T Consensus 294 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~- 372 (433)
T 4hw6_A 294 KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP- 372 (433)
T ss_dssp TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-
T ss_pred CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-
Confidence 4 89998865 3322 1122111 0000 001234677898 677775544 45678999985
Q ss_pred CCeeEEEeecc------------------ccCeEEEEEe-CCCCEEEEEecCCeEEEEEcc
Q psy12614 233 TGVQWSDVKTH------------------KKDILALTVS-EDENYLYCAGVDPTVVCFQRT 274 (708)
Q Consensus 233 ~~~~~~~~~~~------------------~~~i~~~~~s-~~~~~l~~~~~dg~i~iw~~~ 274 (708)
+|... ++.+. -.....++++ ++++++++-..++.|+.++++
T Consensus 373 ~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 373 EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 56443 32221 1236789999 555544444456678877764
No 284
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.40 E-value=0.00016 Score=69.81 Aligned_cols=203 Identities=8% Similarity=-0.029 Sum_probs=130.6
Q ss_pred cEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CC-EEEEEcCCCcEEEEECCCCeE
Q psy12614 28 VINCIACEPKSSRLAVS-RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--ND-RLFSGGLQGFVNEYDMRRLNI 103 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~-~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~-~l~s~~~d~~i~vwd~~~~~~ 103 (708)
.+.+++|++.+..|... ...+.|..+++..+......+...- .....+++. ++ .+++-...+.|.+++++....
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l--~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 113 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL--LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 113 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECC--SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCC--CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE
Confidence 46688999866555554 4567899999887642221333322 456677777 44 445556678999999876543
Q ss_pred eEEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eEE
Q psy12614 104 KSSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVR 179 (708)
Q Consensus 104 ~~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~ 179 (708)
...+.........+++.|.+..|+.+.. .+.|...+....... ......-.....++++|++..|+.+... .|.
T Consensus 114 ~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~--~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~ 191 (318)
T 3sov_A 114 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF--IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 191 (318)
T ss_dssp EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE--EEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE--EEEECCCCCccEEEEeccCCEEEEEECCCCEEE
Confidence 3333344466789999997777666552 577888888755432 2222223456899999988888776654 899
Q ss_pred EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
.+|+.. .....+.... ......+++..++.+.+-...+.|..++..+|+....+.
T Consensus 192 ~~d~dG-~~~~~~~~~~------~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 192 KSNLDG-TNRQAVVKGS------LPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEETTS-CSCEEEECSC------CSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEcCCC-CceEEEecCC------CCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 999863 3333333211 344567777644446666667889999987777655554
No 285
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.40 E-value=0.00014 Score=72.65 Aligned_cols=205 Identities=9% Similarity=-0.052 Sum_probs=131.3
Q ss_pred CCcEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEECCCC
Q psy12614 26 PKVINCIACEPKSSRLAVS-RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~-~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~ 101 (708)
...+..++|++.+..|... ...+.|..+++..+.... .+.... .....+++. ++.| ++-...+.|.+.+++..
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~-~~~~~~--~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE-VVSTGL--ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 191 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEE-EECSSC--SCCCCEEEETTTTEEEEEETTTTEEEECBTTSC
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEE-EEeCCC--CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC
Confidence 3457789999866666554 456789999988765433 333222 345667777 4444 55566788999988765
Q ss_pred eEeEEEeecCCceEEEEEecCCCEEEEEeC-C-CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--e
Q psy12614 102 NIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-Q-GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--A 177 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~ 177 (708)
.....+...-.....++++|.+..|..+.. . +.|..++....... ......-.....|+|+|++..|+.+... .
T Consensus 192 ~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~--~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~ 269 (386)
T 3v65_B 192 HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR--IIADTHLFWPNGLTIDYAGRRMYWVDAKHHV 269 (386)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE--EEECSSCSCEEEEEEEGGGTEEEEEETTTTE
T ss_pred ceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE--EEEECCCCCeeeEEEeCCCCEEEEEECCCCE
Confidence 443334334456889999998776666543 3 67888888765443 2222333457899999888877776554 8
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT 242 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 242 (708)
|..+|+... ....+.... ......+++..+..+++-...+.|..++..+|+....+..
T Consensus 270 I~~~d~dG~-~~~~~~~~~------~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 270 IERANLDGS-HRKAVISQG------LPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp EEEECTTSC-SCEEEECSS------CSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred EEEEeCCCC-eeEEEEECC------CCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEcc
Confidence 999997643 333332221 3346677774333355666678888888767766666543
No 286
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.39 E-value=1.6e-05 Score=87.23 Aligned_cols=192 Identities=12% Similarity=0.116 Sum_probs=115.5
Q ss_pred cEEEEEEc-CCCCEEEEEeC-CC----cEEEEeCCCC-CeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC-----CcE
Q psy12614 28 VINCIACE-PKSSRLAVSRA-DQ----SIEIWDISET-PHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ-----GFV 93 (708)
Q Consensus 28 ~v~~~~~s-~~~~~la~~~~-dg----~v~iwd~~~~-~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d-----~~i 93 (708)
.+...+|| |||++||.+.. +| .|.++|+.++ +.+...+. .....++|+ ++.|+....+ ..|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~-----~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS-----GTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE-----EECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc-----CceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 68889999 99999997643 33 4999999998 63321111 123457898 6777766654 368
Q ss_pred EEEECCCCeE--eEEEe-ecCCceEEEEEecCCCEEEEEeC---CCcEEEEEccCCc--E--EEEEecccccccEEEEEE
Q psy12614 94 NEYDMRRLNI--KSSTA-VTSGTCWCLSVHKKKRLLAAGTE---QGHINLFQISDEG--L--LYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 94 ~vwd~~~~~~--~~~~~-~~~~~v~~~~~s~~~~~la~~~~---d~~i~iwd~~~~~--~--~~~~~~~~~~~~v~~~~~ 163 (708)
.++++.++.. ...+. ........+.|||||++|+..+. ...|+++|+.++. . . .......+...++.|
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~--~l~~~~~~~~~s~~~ 327 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLE--IVRPREKGVRYDVQM 327 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEE--ESSCCCTTCCEEEEE
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeE--EeecCCCCceEEEee
Confidence 8889887642 22222 22345668899999999887653 4568889988752 2 2 333444455566665
Q ss_pred CCCCCEEEEecC----C-eEEEEEcCCCceEEE-EEecccCCCCCceeEEEEEEccCCEEEEEcCCCc--EEEEeC
Q psy12614 164 HSSGDYLVTGCA----A-AVRVWDIHKGHAIHK-MSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGF--VRFWDG 231 (708)
Q Consensus 164 s~d~~~l~~~~~----d-~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~--i~~wd~ 231 (708)
+.++.+++.... . .|..+++.++..... +... .....+..+.+..+.-+++...+|. |.++++
T Consensus 328 ~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~-----~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 328 HGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDH-----SEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp ETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECC-----CSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred eeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECC-----CCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 544444444332 3 788888765322222 2211 1133566666653323556666664 556675
No 287
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.36 E-value=0.00032 Score=70.96 Aligned_cols=239 Identities=9% Similarity=0.065 Sum_probs=138.3
Q ss_pred cEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC-C----cEEEEECC
Q psy12614 28 VINCIACEP-KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ-G----FVNEYDMR 99 (708)
Q Consensus 28 ~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d-~----~i~vwd~~ 99 (708)
....++++| ++..|.++...+.|..+|+.++... .+.... .....|+|+ +++|+++... + .+...+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~--~~~~~~--~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~- 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS--TVYSGL--SKVRTICWTHEADSMIITNDQNNNDRPNNYILTR- 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE--EEECCC--SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE--EEecCC--CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-
Confidence 457889998 4556666655578999999876643 333333 678999999 7766666542 2 2333443
Q ss_pred CCeEe--EEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC-
Q psy12614 100 RLNIK--SSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA- 175 (708)
Q Consensus 100 ~~~~~--~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~- 175 (708)
.+... ..+. .......++++| ++.++++-..++.|..++..++.......... ......++|+|+|++|+.+..
T Consensus 213 ~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 213 ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCCEEEEECTTSSEEEEEETT
T ss_pred CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcceeEEEcCCCCEEEEEECC
Confidence 33221 2222 234567889999 66666665567889999998776532122222 245678999999996665544
Q ss_pred C-eEEEEEcCC--Cce--EEEEEec--ccCC------CCCceeEE-EEEEc--------cCCEEEEE-cCCCcEEEEeCC
Q psy12614 176 A-AVRVWDIHK--GHA--IHKMSLD--KSSK------FSKNTAVW-CVAFC--------ADFTIITG-DSGGFVRFWDGK 232 (708)
Q Consensus 176 d-~i~iwd~~~--~~~--~~~~~~~--~~~~------~~~~~~v~-~~~~~--------~~~~l~~~-~~dg~i~~wd~~ 232 (708)
. .|..++... ++. +..+... ..+. ...-.... .++.. ++|.|..+ ...+.|+.++ .
T Consensus 291 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~ 369 (430)
T 3tc9_A 291 QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-P 369 (430)
T ss_dssp TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-T
T ss_pred CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-C
Confidence 4 899987653 221 1222211 0000 00011123 45553 34665544 4467888888 4
Q ss_pred CCeeEEEeec----c-------------ccCeEEEEEeCCCCEEEEE-ecCCeEEEEEcc
Q psy12614 233 TGVQWSDVKT----H-------------KKDILALTVSEDENYLYCA-GVDPTVVCFQRT 274 (708)
Q Consensus 233 ~~~~~~~~~~----~-------------~~~i~~~~~s~~~~~l~~~-~~dg~i~iw~~~ 274 (708)
+|........ . -.....++++|++..|+++ ..++.|+.++++
T Consensus 370 ~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 370 QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 5654333211 0 1246889999954445444 445678877654
No 288
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.34 E-value=4e-05 Score=82.77 Aligned_cols=260 Identities=11% Similarity=0.025 Sum_probs=146.3
Q ss_pred CCEEEEEcCCC-----------cEEEEECCCCeEe--EEEe-ecCCceEEEEEecCCCEEEEEeC-CCcEEEEEccCCcE
Q psy12614 81 NDRLFSGGLQG-----------FVNEYDMRRLNIK--SSTA-VTSGTCWCLSVHKKKRLLAAGTE-QGHINLFQISDEGL 145 (708)
Q Consensus 81 ~~~l~s~~~d~-----------~i~vwd~~~~~~~--~~~~-~~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~ 145 (708)
++.++.|+.+. .+.+||..+++-. ..+. .+.....++++..+++.+++|+. +..+.+||..+++.
T Consensus 198 g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W 277 (656)
T 1k3i_A 198 GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSW 277 (656)
T ss_dssp TEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEE
T ss_pred CEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCce
Confidence 55666666432 5889999887632 2222 23334456788899999999884 56899999998877
Q ss_pred EEEEecccccccEEEEEECCCCCEEEEecC-------CeEEEEEcCCCceEEEEEecc-cCCCCCceeEEEEEEccCCE-
Q psy12614 146 LYEKLLDRQQGRILCTAWHSSGDYLVTGCA-------AAVRVWDIHKGHAIHKMSLDK-SSKFSKNTAVWCVAFCADFT- 216 (708)
Q Consensus 146 ~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~-------d~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~- 216 (708)
.....+.. ...-.+++..++++.++.|+. +.+.+||..+++-.. +.... ... ..... ...+..+++
T Consensus 278 ~~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~-~~~~~~~p~-~~~~~--~~~~~~~~~i 352 (656)
T 1k3i_A 278 IPGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS-LPNAKVNPM-LTADK--QGLYRSDNHA 352 (656)
T ss_dssp EECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE-ETTSCSGGG-CCCCT--TGGGTTTCSC
T ss_pred eECCCCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCccee-CCCcccccc-ccccc--cceeecCCce
Confidence 53222221 112235566689999998883 258999998765332 21000 000 00000 011122333
Q ss_pred EEEEcCC---------CcEEEEeCCCCeeEEEeecccc---------CeEEEEEeC-CCCEEEEEecCC-----------
Q psy12614 217 IITGDSG---------GFVRFWDGKTGVQWSDVKTHKK---------DILALTVSE-DENYLYCAGVDP----------- 266 (708)
Q Consensus 217 l~~~~~d---------g~i~~wd~~~~~~~~~~~~~~~---------~i~~~~~s~-~~~~l~~~~~dg----------- 266 (708)
++.++.+ ..+..||..+.........+.. .-.++.|.. +++.++.|+.++
T Consensus 353 yv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~ 432 (656)
T 1k3i_A 353 WLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAH 432 (656)
T ss_dssp CEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEE
T ss_pred EEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcce
Confidence 3444433 4577888877654433322211 224444543 677777777542
Q ss_pred eEEEEEccCCcccccCCCCCCCCcceEEeE--EEeccccceEEEEE-eCCEEEEEcCC-----------CeEEEEeCCCC
Q psy12614 267 TVVCFQRTRKPQVCSTSGPEQGSSVWVRSV--NRVIHEGDVKSLAL-HGNRLYSGGLD-----------SYLSLSYYPPK 332 (708)
Q Consensus 267 ~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~v~~l~~-~~~~l~s~~~d-----------~~i~iw~~~~~ 332 (708)
.+.+||..+ . .|.... .+........++.. .+..++.||.+ ..+.+||..+.
T Consensus 433 ~v~~yd~~~--------~------~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 433 IITLGEPGT--------S------PNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp EEECCSTTS--------C------CEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred EEEcCCCCC--------C------CeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 567777666 2 354332 22211122233444 37888888864 46889999887
Q ss_pred ceeecCccCCC----CceEEEEcCCcEEEEEc
Q psy12614 333 TLVKYPCTLAQ----STPVSLAKDIQHVLLQY 360 (708)
Q Consensus 333 ~~~~~~~~~~~----~~~~~~s~~~~~l~~~~ 360 (708)
....+. +... .....+.+++++++.+.
T Consensus 499 ~W~~~~-~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 499 TFYKQN-PNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp EEEECC-CCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred ceeecC-CCCCccccccHhhcCCCcEEEecCC
Confidence 765554 2221 12345668999999874
No 289
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.32 E-value=0.00073 Score=65.61 Aligned_cols=234 Identities=8% Similarity=0.043 Sum_probs=132.3
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEe--cCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCe
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFI--GDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~--~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
...+.+++|+| +..+++ +..|.|.. ..+.++.-..... .+. ..+..+.+. ...++.++.+|.|.. ..+.|+
T Consensus 79 ~~~~~~i~~~~-~~~~~~-g~~g~i~~-S~DgG~tW~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~ 152 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWIV-GEPPIMLH-TTDGGQSWSQIPLDPKLP--GSPRLIKALGNGSAEMITNVGAIYR-TKDSGK 152 (327)
T ss_dssp CCEEEEEEEET-TEEEEE-EETTEEEE-ESSTTSSCEECCCCTTCS--SCEEEEEEEETTEEEEEETTCCEEE-ESSTTS
T ss_pred CccEEEEEecC-CeEEEE-ECCCeEEE-ECCCCCCceECccccCCC--CCeEEEEEECCCCEEEEeCCccEEE-EcCCCC
Confidence 34688999987 444454 45564443 3333332221111 223 567888877 555555555665432 222333
Q ss_pred EeEE-EeecCCceEEEEEecCCCEEEEEeCCCcEEE-EEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEE
Q psy12614 103 IKSS-TAVTSGTCWCLSVHKKKRLLAAGTEQGHINL-FQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRV 180 (708)
Q Consensus 103 ~~~~-~~~~~~~v~~~~~s~~~~~la~~~~d~~i~i-wd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~i 180 (708)
.-.. .......+.++++.+++.+++++. +|.+.. +|-...... ..-......+..+.+.+++..++.+....+.+
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~--~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~ 229 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWE--PHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAF 229 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCE--EEECCSSSCEEEEEECTTSCEEEEETTTEEEE
T ss_pred CCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCcee--ECCCCCCCccceeEECCCCCEEEEeCCceEEE
Confidence 2222 234456789999999988877654 454443 332122222 11223456788999999998766554447666
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec---cccCeEEEEEeCCCC
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT---HKKDILALTVSEDEN 257 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~---~~~~i~~~~~s~~~~ 257 (708)
.+...|+....+..+.. .....+.++++.+++++++++.+|.| ++..+.|+.-..+.. ....+.++.|.+++
T Consensus 230 s~~D~G~tW~~~~~~~~---~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~- 304 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLR---RNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD- 304 (327)
T ss_dssp EETTEEEEECCCBCTTS---SCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-
T ss_pred ecCCCCCeeEeccCCcc---cCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-
Confidence 64222443333322100 01245889999988886666667877 444455654444432 24567889887555
Q ss_pred EEEEEecCCeEEEEEc
Q psy12614 258 YLYCAGVDPTVVCFQR 273 (708)
Q Consensus 258 ~l~~~~~dg~i~iw~~ 273 (708)
.+++++.+|.|..++-
T Consensus 305 ~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 305 QGFILGQKGILLRYVT 320 (327)
T ss_dssp EEEEECSTTEEEEECC
T ss_pred ceEEEcCCceEEEEcC
Confidence 5667778898777654
No 290
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.32 E-value=0.0028 Score=61.17 Aligned_cols=217 Identities=10% Similarity=-0.032 Sum_probs=133.2
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEe-CCCcEEEEEccC----CcEEEEEecccccccEEEEEECC
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQISD----EGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~----~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
..|+..|+.+.+....+. ....+.+++|++++..|..+. ..+.|..++..+ .... ..+...-.....+++.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~--~~~~~~~~~p~glavd~ 86 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD--TVISRDIQAPDGLAVDW 86 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CE--EEECSSCSCCCEEEEET
T ss_pred CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccE--EEEeCCCCCcCEEEEee
Confidence 568889998876554443 345678999999776666554 468899999876 2222 22222223457888887
Q ss_pred CCCEEEEe-cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC-CEEEEEcC-C-CcEEEEeCCCCeeEEEe
Q psy12614 166 SGDYLVTG-CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD-FTIITGDS-G-GFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 166 d~~~l~~~-~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~-d-g~i~~wd~~~~~~~~~~ 240 (708)
.+..|+.+ ... .|.+.++.... ...+.... ......+++.|. +.++.+.. . +.|...++. |+....+
T Consensus 87 ~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~------~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~ 158 (316)
T 1ijq_A 87 IHSNIYWTDSVLGTVSVADTKGVK-RKTLFREN------GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSL 158 (316)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSS-EEEEEECT------TCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEE
T ss_pred cCCeEEEEECCCCEEEEEeCCCCc-eEEEEECC------CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEE
Confidence 66556544 445 99999986433 33332211 356789999984 56554443 3 688888875 4433333
Q ss_pred -eccccCeEEEEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEE
Q psy12614 241 -KTHKKDILALTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYS 317 (708)
Q Consensus 241 -~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s 317 (708)
...-.....+++++++..|+.+.. .+.|..+++.. .. .+ .............++++. +..+++
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg--------~~----~~--~~~~~~~~~~~P~giav~~~~ly~~ 224 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG--------GN----RK--TILEDEKRLAHPFSLAVFEDKVFWT 224 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS--------CS----CE--EEEECTTTTSSEEEEEEETTEEEEE
T ss_pred EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC--------Cc----eE--EEeecCCccCCcEEEEEECCEEEEE
Confidence 223356789999998888877664 56899999875 22 00 111111122345677777 556666
Q ss_pred EcCCCeEEEEeCCCC
Q psy12614 318 GGLDSYLSLSYYPPK 332 (708)
Q Consensus 318 ~~~d~~i~iw~~~~~ 332 (708)
-...+.|..++..++
T Consensus 225 d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 225 DIINEAIFSANRLTG 239 (316)
T ss_dssp ETTTTEEEEEETTTC
T ss_pred ECCCCeEEEEeCCCC
Confidence 666778888886543
No 291
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.29 E-value=0.00027 Score=71.47 Aligned_cols=234 Identities=8% Similarity=0.027 Sum_probs=137.8
Q ss_pred ceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC----C-eEEEEEcCC
Q psy12614 113 TCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA----A-AVRVWDIHK 185 (708)
Q Consensus 113 ~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~----d-~i~iwd~~~ 185 (708)
....++++|+ +..|.++...+.|+.+|..++... .+.........++|+++|+++++... . .+...+...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~---~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD---IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE---EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE---EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 4668999995 445555554488999999888774 33334556899999999994444431 2 344444332
Q ss_pred CceE-EEEEecccCCCCCceeEEEEEEcc-CCEEEEEc-CCCcEEEEeCCCCeeEEEe-ec-cccCeEEEEEeCCCCEEE
Q psy12614 186 GHAI-HKMSLDKSSKFSKNTAVWCVAFCA-DFTIITGD-SGGFVRFWDGKTGVQWSDV-KT-HKKDILALTVSEDENYLY 260 (708)
Q Consensus 186 ~~~~-~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~~~~-~dg~i~~wd~~~~~~~~~~-~~-~~~~i~~~~~s~~~~~l~ 260 (708)
+... ..+.. ......+++.| +|.+..+. .++.|+.+|..++.....+ .. ....-..++++|++++|+
T Consensus 217 ~~~~~~~~~~--------~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LY 288 (433)
T 4hw6_A 217 GFTERLSLCN--------ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAY 288 (433)
T ss_dssp TTCCEEEEEE--------CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEE
T ss_pred Ceeccccccc--------cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEE
Confidence 2211 11111 23345688899 67766554 5678999998877653332 11 122234699999999666
Q ss_pred EEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec---------------cccceEEEEE---------e--CC
Q psy12614 261 CAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI---------------HEGDVKSLAL---------H--GN 313 (708)
Q Consensus 261 ~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---------------~~~~v~~l~~---------~--~~ 313 (708)
.+.. .+.|+.++..... +. +.....+.+ .-.....+++ . +.
T Consensus 289 vad~~~~~I~~~~~d~~~------~~------~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~ 356 (433)
T 4hw6_A 289 IIYNGKHCIYRVDYNRET------GK------LAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD 356 (433)
T ss_dssp EEETTTTEEEEEEBCTTT------CC------BCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE
T ss_pred EEeCCCCEEEEEeCCCCC------cc------cCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc
Confidence 6654 5789998876300 10 000001111 1123566887 5 55
Q ss_pred EEEEEcCCCeEEEEeCCCCceeecCc------------------cCCCCceEEEE-cCCcEEEEE-cCCeEEEEEec
Q psy12614 314 RLYSGGLDSYLSLSYYPPKTLVKYPC------------------TLAQSTPVSLA-KDIQHVLLQ-YTSHLELWSLG 370 (708)
Q Consensus 314 ~l~s~~~d~~i~iw~~~~~~~~~~~~------------------~~~~~~~~~~s-~~~~~l~~~-~~~~i~i~~~~ 370 (708)
++++-...+.|+.++... .+..+.+ .+..+..++++ ++|.++++- .++.|+.++++
T Consensus 357 lyvaD~~n~~I~~~~~~G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 357 FYFCDRDSHTVRVLTPEG-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEETTTTEEEEECTTS-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEECCCCEEEEECCCC-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 666666677888888543 3322221 12345678999 677777764 56778777654
No 292
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.25 E-value=0.0022 Score=64.13 Aligned_cols=222 Identities=7% Similarity=0.013 Sum_probs=137.6
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEE-cCCCcEEEEECCCC----eEeEEEeecC
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSG-GLQGFVNEYDMRRL----NIKSSTAVTS 111 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~-~~d~~i~vwd~~~~----~~~~~~~~~~ 111 (708)
.+|+.+. ...|+..++....... .+. .. ..+.+|+|. ++.|+.+ ...+.|..+++... .....+....
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~-~~~-~~--~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTS-LIP-NL--RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEE-EEC-SC--SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred ceeEEec-cceeEEEccCCcceeE-ecc-cc--CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence 3555554 3589999998766543 333 33 678999999 5666555 46788999998763 2233333344
Q ss_pred CceEEEEEecCCCEEEE-EeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec--CC-eEEEEEcCCCc
Q psy12614 112 GTCWCLSVHKKKRLLAA-GTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC--AA-AVRVWDIHKGH 187 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~--~d-~i~iwd~~~~~ 187 (708)
.....+++.+.+..|+. -...+.|.+.++++.... ..+.........+++.|.+.+|+... .. .|...++.. .
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~--~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG-~ 235 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-V 235 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEE--EEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS-C
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceE--EEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC-C
Confidence 56789999985555544 445788999998876553 23333344578999999776666554 23 788888754 3
Q ss_pred eEEEEEecccCCCCCceeEEEEEEccCC-EEEEE-cCCCcEEEEeCCCCeeEEEeec--cccCeEEEEEeCCCCEEEEEe
Q psy12614 188 AIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITG-DSGGFVRFWDGKTGVQWSDVKT--HKKDILALTVSEDENYLYCAG 263 (708)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~-~~dg~i~~wd~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~ 263 (708)
....+... .-.....+++++++ +|..+ ...+.|..+|+........... .-.....+++.. +..+++-.
T Consensus 236 ~~~~~~~~------~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~-~~lywtd~ 308 (400)
T 3p5b_L 236 DIYSLVTE------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDI 308 (400)
T ss_dssp SCEEEECS------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET-TEEEEEES
T ss_pred ccEEEEEC------CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC-CEEEEecC
Confidence 33333221 13567899999765 55544 4567899999864433222221 223455777733 33444555
Q ss_pred cCCeEEEEEccC
Q psy12614 264 VDPTVVCFQRTR 275 (708)
Q Consensus 264 ~dg~i~iw~~~~ 275 (708)
..+.|..++..+
T Consensus 309 ~~~~V~~~~~~~ 320 (400)
T 3p5b_L 309 INEAIFSANRLT 320 (400)
T ss_dssp SSCSEEEEESSS
T ss_pred CCCeEEEEEcCC
Confidence 567888888766
No 293
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.24 E-value=0.0032 Score=58.50 Aligned_cols=233 Identities=9% Similarity=0.124 Sum_probs=155.5
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCC-CeEeEEEe
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRR-LNIKSSTA 108 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~-~~~~~~~~ 108 (708)
+.-.+|..+.||.=. ..++.|+|+++...+. . |.+...|.-=.|- .+.|+-.+ +..|.-|+++. ..+.+.+.
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klk-s---~~~~e~VvfWkWis~~~L~lVT-~taVyHWs~~~~s~P~kvFd 144 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMK-A---HTMTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFD 144 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEE-E---EECSSCEEEEEECSSSEEEEEE-SSEEEEEESSTTCCCEEEEE
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhc-c---eecCCccEEEEecCCCeEEEEc-CCcEEEEcccCCCCCceeee
Confidence 455688888888765 5689999999977654 3 3333678877787 66665554 45799999975 35666666
Q ss_pred ec----CCceEEEEEecCCCEEEEEeC-------CCcEEEEEccCCcEEEEEecccccccEEEEEECCC---CCEEEEec
Q psy12614 109 VT----SGTCWCLSVHKKKRLLAAGTE-------QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS---GDYLVTGC 174 (708)
Q Consensus 109 ~~----~~~v~~~~~s~~~~~la~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d---~~~l~~~~ 174 (708)
.| ...|.....+++.++++..+- .|.+.+|..+.+.. +.+.+|.+....+.+..+ .+.++.+.
T Consensus 145 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s---Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~ 221 (365)
T 2xzh_A 145 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS---QPIEGHAASFAQFKMEGNAEESTLFCFAV 221 (365)
T ss_dssp CCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE---EEECCSEEEEEEECCTTCSSCEEEEEEEE
T ss_pred cchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc---ceeeeeeeeeEEEecCCCCCCceEEEEEE
Confidence 54 457888888999998876442 47789999887765 678888765544443211 12344333
Q ss_pred C---C-eEEEEEcCCC---c-----eEEEEEecccCCCCCceeEEEEEEccC-CEEEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 175 A---A-AVRVWDIHKG---H-----AIHKMSLDKSSKFSKNTAVWCVAFCAD-FTIITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 175 ~---d-~i~iwd~~~~---~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
. . .+++.++... . ....+..+... ..+..-++..++. |-+...+.-|.|++||++++.++..-+
T Consensus 222 r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea---~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nr 298 (365)
T 2xzh_A 222 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA---QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 298 (365)
T ss_dssp EETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTC---TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccc---cCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEec
Confidence 3 2 6888887432 1 11122222111 1444556666654 457788889999999999999998877
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
-....|..-+...+..=++.....|.+.--.++.
T Consensus 299 IS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 299 ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred cCCCceEEecccCCCCcEEEEcCCCEEEEEEECc
Confidence 6777777666666655677777888887777665
No 294
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.23 E-value=0.00014 Score=79.78 Aligned_cols=190 Identities=14% Similarity=0.066 Sum_probs=109.0
Q ss_pred ceEEEEEe-cCCCEEEEEeC-CC----cEEEEEccCC-cEEEEEecccccccEEEEEECCCCCEEEEecCC------eEE
Q psy12614 113 TCWCLSVH-KKKRLLAAGTE-QG----HINLFQISDE-GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA------AVR 179 (708)
Q Consensus 113 ~v~~~~~s-~~~~~la~~~~-d~----~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d------~i~ 179 (708)
.+...+|| |||++||.+.. +| .|+++|+.++ +.+. ..+ ......++|+|||+.|+....+ .|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~---~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKV---SGTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCE---EEECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-ccc---cCceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 67889999 99999987644 22 4999999998 6321 111 1223468899999988876542 578
Q ss_pred EEEcCCCceE--EEEEecccCCCCCceeEEEEEEccCCE-EEEEc---CCCcEEEEeCCCC--ee--EEEeeccccCeEE
Q psy12614 180 VWDIHKGHAI--HKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD---SGGFVRFWDGKTG--VQ--WSDVKTHKKDILA 249 (708)
Q Consensus 180 iwd~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~---~dg~i~~wd~~~~--~~--~~~~~~~~~~i~~ 249 (708)
++++.++... ..+... .......+.|+|||+ |+... ....|+++|+.++ +. .............
T Consensus 251 ~~~lgt~~~~~~lv~~~~------~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s 324 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEH------NPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD 324 (751)
T ss_dssp EEETTSCGGGCEEEEECC------CTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEE
T ss_pred EEECCCCchhcEEEEecC------CCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEE
Confidence 8888776422 222211 123456889999996 44332 2446888998875 23 2223333344455
Q ss_pred EEEeCCCCEEE-EEecC--C--eEEEEEccCCcccccCCCCCCCCcceEEeEE-Eecccc--ceEEEEEe-CCEEEEEcC
Q psy12614 250 LTVSEDENYLY-CAGVD--P--TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN-RVIHEG--DVKSLALH-GNRLYSGGL 320 (708)
Q Consensus 250 ~~~s~~~~~l~-~~~~d--g--~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~--~v~~l~~~-~~~l~s~~~ 320 (708)
+.|.. +..|+ ....+ + .|..+++.+ +. .| .. +..+.. .+..+.+. +.++++...
T Consensus 325 ~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~--------~~-----~~---~~~li~~~~~~~l~~~~~~~~~lv~~~~~ 387 (751)
T 2xe4_A 325 VQMHG-TSHLVILTNEGGAVNHKLLIAPRGQ--------PS-----DW---SHVLVDHSEDVFMESIAVRSNYLVVAGRR 387 (751)
T ss_dssp EEEET-TTEEEEEECTTTCTTCEEEEEETTS--------TT-----CC---CCEEECCCSSEEEEEEEECSSEEEEEEEE
T ss_pred Eeeee-CCEEEEEeCCCCCCCcEEEEEcCCC--------cc-----cc---eeeEECCCCCcEEEEEEEECCEEEEEEEe
Confidence 55444 55554 44433 2 566666553 11 11 11 222222 34556666 445566666
Q ss_pred CCeEE--EEeC
Q psy12614 321 DSYLS--LSYY 329 (708)
Q Consensus 321 d~~i~--iw~~ 329 (708)
++..+ ++++
T Consensus 388 ~g~~~l~~~dl 398 (751)
T 2xe4_A 388 AGLTRIWTMMA 398 (751)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEec
Confidence 77544 4554
No 295
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.21 E-value=0.0014 Score=63.03 Aligned_cols=222 Identities=9% Similarity=0.021 Sum_probs=136.8
Q ss_pred EEEEEeCCCcEEEEeCCCCC-eEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCCcEEEEECCCCeEe-EEEeecCCce
Q psy12614 40 RLAVSRADQSIEIWDISETP-HVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQGFVNEYDMRRLNIK-SSTAVTSGTC 114 (708)
Q Consensus 40 ~la~~~~dg~v~iwd~~~~~-~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~vwd~~~~~~~-~~~~~~~~~v 114 (708)
+|+.+. ...|+..++.... .....+.+ . ..+.+++|. ++.|+ +-...+.|..+++..+... ..+...-...
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~-~--~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p 81 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGG-L--EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSP 81 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEE-E--EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCC
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecC-C--CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCc
Confidence 444443 4579999998763 22213332 2 457789998 45554 5456788999998876422 2223333457
Q ss_pred EEEEEecCCCEEE-EEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec--CC-eEEEEEcCCCceEE
Q psy12614 115 WCLSVHKKKRLLA-AGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC--AA-AVRVWDIHKGHAIH 190 (708)
Q Consensus 115 ~~~~~s~~~~~la-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~--~d-~i~iwd~~~~~~~~ 190 (708)
..+++.+.+..|. +-...+.|.+++....... ..+.........+++.|.+..|+.+. .. .|...++. |....
T Consensus 82 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~--~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~ 158 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRF 158 (318)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCE
T ss_pred cEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE--EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeE
Confidence 7899998655554 4445678999998865543 22323345678999998766666554 24 78888875 43333
Q ss_pred EEEecccCCCCCceeEEEEEEccCC-EEEEE-cCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeE
Q psy12614 191 KMSLDKSSKFSKNTAVWCVAFCADF-TIITG-DSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268 (708)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~-~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 268 (708)
.+... .-.....+++++++ ++..+ ...+.|..+|+..........+.......+++..+ ..+++-...+.|
T Consensus 159 ~~~~~------~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~-~lywtd~~~~~V 231 (318)
T 3sov_A 159 IIINS------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSI 231 (318)
T ss_dssp EEECS------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT-EEEEEETTTTEE
T ss_pred EEEEC------CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC-EEEEEecCCCeE
Confidence 33221 13557899999855 65544 45688999998643322222323445667777543 344454556788
Q ss_pred EEEEccC
Q psy12614 269 VCFQRTR 275 (708)
Q Consensus 269 ~iw~~~~ 275 (708)
..++..+
T Consensus 232 ~~~~~~~ 238 (318)
T 3sov_A 232 LACNKYT 238 (318)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 8888876
No 296
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.14 E-value=0.0021 Score=69.86 Aligned_cols=207 Identities=12% Similarity=0.046 Sum_probs=129.4
Q ss_pred CCcEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCC---eEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEEC
Q psy12614 26 PKVINCIACEPKSSRLAVS-RADQSIEIWDISETP---HVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDM 98 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~-~~dg~v~iwd~~~~~---~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~ 98 (708)
...+..++|++....|... ...+.|..+++.... .....+.... .....|++. ++.| ++-...+.|.+.++
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l--~~P~GLAvD~~~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDWIHSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC--SCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC--CCcceeeeeecCCcEEEEecCCCeEEEEeC
Confidence 4567789999866655554 446778888887531 1222343333 556778887 5444 45567889999999
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
........+.........|++.|.+.+|+.+.. .+.|...++...... ..+...-.....|++.+.+..|+.+...
T Consensus 501 dG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~--~lv~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 501 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--SLVTENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE--EEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE--EEEeCCCCCceEEEEecCCCeEEEEeCC
Confidence 876544444444566899999998777766543 367888888766553 2333334578899999888888777654
Q ss_pred --eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 177 --AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 177 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
.|...++... ....+.... ........|++..+..+++-...+.|...|..+|+.+..+.
T Consensus 579 ~~~I~~~d~dG~-~~~~v~~~~----~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 579 LHSISSIDVNGG-NRKTILEDE----KRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp TTEEEEEETTSC-SCEEEEECT----TTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CCcEEEEecCCC-ceEEEecCC----CccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 8999998544 333333221 11233456666443224455556778888877776555543
No 297
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.09 E-value=0.0041 Score=62.86 Aligned_cols=243 Identities=13% Similarity=0.091 Sum_probs=139.2
Q ss_pred cEEEEEEcC-CCCEEEEE-eCCCcEEEEeCCCCCeEEEEEecCC-CCCcEEEEEE-------e--CCEEEEEcCCC----
Q psy12614 28 VINCIACEP-KSSRLAVS-RADQSIEIWDISETPHVDRVFIGDP-LSNSIECLTW-------F--NDRLFSGGLQG---- 91 (708)
Q Consensus 28 ~v~~~~~s~-~~~~la~~-~~dg~v~iwd~~~~~~~~~~~~~h~-~~~~v~~l~~-------~--~~~l~s~~~d~---- 91 (708)
....|+|+| ++..|.++ ...+.|++.|..++.... .+.... .......|+| + ++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~-l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSS-PLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEE-EECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEE-EEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 467899999 34445444 445678899988876643 333211 0136899999 7 77677766544
Q ss_pred ---cEEEEECCC-CeEe-----EEEeecCCceEEEEEecCCCE-EEEEeCCCcEEEEEcc-------CCcE---------
Q psy12614 92 ---FVNEYDMRR-LNIK-----SSTAVTSGTCWCLSVHKKKRL-LAAGTEQGHINLFQIS-------DEGL--------- 145 (708)
Q Consensus 92 ---~i~vwd~~~-~~~~-----~~~~~~~~~v~~~~~s~~~~~-la~~~~d~~i~iwd~~-------~~~~--------- 145 (708)
.|.+.+... +... ..+... .....++++|++.. +++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 266665444 2221 222222 34567899995554 4455567889999997 5553
Q ss_pred --E-EEEecccccccEEEEEECCCCCEEEEecC-C-eEEEEEcC--CCceE--EEEEec--ccCCC------CCceeEE-
Q psy12614 146 --L-YEKLLDRQQGRILCTAWHSSGDYLVTGCA-A-AVRVWDIH--KGHAI--HKMSLD--KSSKF------SKNTAVW- 207 (708)
Q Consensus 146 --~-~~~~~~~~~~~v~~~~~s~d~~~l~~~~~-d-~i~iwd~~--~~~~~--~~~~~~--~~~~~------~~~~~v~- 207 (708)
. ..... +.......++|+|+|++|+.+.. . .|+.++.. .+... ..+... ..+.- ..-....
T Consensus 298 g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~ 376 (496)
T 3kya_A 298 NTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQ 376 (496)
T ss_dssp TTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEE
T ss_pred cccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeE
Confidence 1 00112 22345689999999997665544 4 88886653 33211 222211 00000 0012234
Q ss_pred EEEEc-------cCCEEEEE-cCCCcEEEEeCCCCeeEEEeecc------------------------ccCeEEEEEeCC
Q psy12614 208 CVAFC-------ADFTIITG-DSGGFVRFWDGKTGVQWSDVKTH------------------------KKDILALTVSED 255 (708)
Q Consensus 208 ~~~~~-------~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~~------------------------~~~i~~~~~s~~ 255 (708)
.++.. ++|.|+.+ ..+..|+.++ .+|. +.++-+. -.....++++++
T Consensus 377 gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~ 454 (496)
T 3kya_A 377 GVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV 454 (496)
T ss_dssp EEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred EEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence 44444 45665444 4567899998 4564 3344321 123568999997
Q ss_pred -CCEEEEEecCCeEEEEEccC
Q psy12614 256 -ENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 256 -~~~l~~~~~dg~i~iw~~~~ 275 (708)
+++.++=..++.|+.+++..
T Consensus 455 ~g~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 455 KEMFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp TTEEEEEETTTTEEEEEEECC
T ss_pred CCEEEEEeCCCCEEEEEECCC
Confidence 65444444567899998876
No 298
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.06 E-value=0.01 Score=57.57 Aligned_cols=233 Identities=9% Similarity=0.121 Sum_probs=158.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCC-CeEeEEEe
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRR-LNIKSSTA 108 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~-~~~~~~~~ 108 (708)
+.-.+|..+.||.=. ..++.|+|+++...+. ... +...|.--.|- .+.|+-.+ +..|.-|+++. ..+.+.+.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klk-s~~---~~e~VvfWkWis~~~l~lVT-~taVyHWsi~~~s~P~kvFd 143 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMK-AHT---MTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFD 143 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEE-EEE---CSSCCCEEEEEETTEEEEEC-SSEEEEEESSSSCCCEEEEE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhc-cee---cCCCceEEEecCCCeEEEEc-CCeeEEecccCCCCchhhee
Confidence 455688888888765 5689999999977654 333 33567777777 66666554 46799999975 35666666
Q ss_pred ec----CCceEEEEEecCCCEEEEEeC-------CCcEEEEEccCCcEEEEEecccccccEEEEEECCCC---CEEEEec
Q psy12614 109 VT----SGTCWCLSVHKKKRLLAAGTE-------QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG---DYLVTGC 174 (708)
Q Consensus 109 ~~----~~~v~~~~~s~~~~~la~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~---~~l~~~~ 174 (708)
.| ...|.....+++.++++..+- .|.+.+|..+.+.. +.+.+|.+....+....+. +.++.+.
T Consensus 144 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s---Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~ 220 (494)
T 1bpo_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS---QPIEGHAASFAQFKMEGNAEESTLFCFAV 220 (494)
T ss_dssp CCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE---EEECCSEEEEEEEECTTCSSEEEEEEEEE
T ss_pred cchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc---chheeeeeeeEEEecCCCCCCceEEEEEE
Confidence 54 457888888999998875432 47789999987766 6788887766555543221 2344443
Q ss_pred C---C-eEEEEEcCCC--------ceEEEEEecccCCCCCceeEEEEEEccC-CEEEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 175 A---A-AVRVWDIHKG--------HAIHKMSLDKSSKFSKNTAVWCVAFCAD-FTIITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 175 ~---d-~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
. . .+++.++... +....+..+.. ...+...++..++. |-+...+.-|.|++||++++.++..-+
T Consensus 221 r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe---~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE---AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp CSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTT---STTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcc---cccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeec
Confidence 3 2 6788877432 11111111111 11444556666664 457788889999999999999988877
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
-....|...+...+..-++.....|.|.--.++.
T Consensus 298 Is~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 298 ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred ccCCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 6777787777776666777777888887777765
No 299
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.01 E-value=0.0082 Score=65.23 Aligned_cols=232 Identities=9% Similarity=0.037 Sum_probs=140.8
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCCcEEEEECCCC--
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQGFVNEYDMRRL-- 101 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~vwd~~~~-- 101 (708)
..-+|.+..+.. +|+.+. ...|+..++....... ...+ . ..+.+|+|. .+.|+ +-...+.|+.+++...
T Consensus 385 ~~~~C~~~~~~p-~Ll~an-~~~Ir~i~l~~~~~~~-l~~~-~--~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~ 458 (791)
T 3m0c_C 385 HTKACKAVGSIA-YLFFTN-RHEVRKMTLDRSEYTS-LIPN-L--RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG 458 (791)
T ss_dssp SCCCCEETTSCC-EEEEEC-BSSEEEECTTSCCCEE-EECS-C--SSEEEEEEETTTTEEEEEETTTTEEEEEEC-----
T ss_pred CCceeeeccccc-cccccc-ccceeEeeccCCccee-eecC-C--CceEEEeecccCCeeEEeeccceeEEEEeccCCCC
Confidence 334455544333 444443 4578888888765543 3433 3 578899998 45555 5456788999998763
Q ss_pred --eEeEEEeecCCceEEEEEecCCCEEEEE-eCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC--C
Q psy12614 102 --NIKSSTAVTSGTCWCLSVHKKKRLLAAG-TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA--A 176 (708)
Q Consensus 102 --~~~~~~~~~~~~v~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~--d 176 (708)
.....+.........|++.+.+..|+.+ ...+.|.+.++.+.... ..+...-.....|++.|.+.+|+.+.. .
T Consensus 459 ~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~--~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~ 536 (791)
T 3m0c_C 459 VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTP 536 (791)
T ss_dssp ---CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE--EEEECTTCCEEEEEEETTTTEEEEEECSSS
T ss_pred CcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEE--EEEeCCCCCcceEEEecCCCCEEEecCCCC
Confidence 2233333344567789999887666554 45788999999876653 223333456889999998767766543 2
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEE-cCCCcEEEEeCCCCeeEEEeec--cccCeEEEE
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITG-DSGGFVRFWDGKTGVQWSDVKT--HKKDILALT 251 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~-~~dg~i~~wd~~~~~~~~~~~~--~~~~i~~~~ 251 (708)
.|...++. |.....+... .-.....|++.+.+ +|+.+ ...+.|...++........+.. .-....+|+
T Consensus 537 ~~I~~~~~d-G~~~~~lv~~------~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~gla 609 (791)
T 3m0c_C 537 AKIKKGGLN-GVDIYSLVTE------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA 609 (791)
T ss_dssp CEEEEEETT-SCCEEEEECS------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEE
T ss_pred CeEEEEecC-CCceEEEEeC------CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEE
Confidence 78888875 4444444322 14568899999654 65554 4457899999864433333332 122345666
Q ss_pred EeCCCCEEEEEe-cCCeEEEEEccC
Q psy12614 252 VSEDENYLYCAG-VDPTVVCFQRTR 275 (708)
Q Consensus 252 ~s~~~~~l~~~~-~dg~i~iw~~~~ 275 (708)
+.. .+|+.+. ..+.|...+..+
T Consensus 610 v~~--~~lYwtD~~~~~I~~~dk~t 632 (791)
T 3m0c_C 610 VFE--DKVFWTDIINEAIFSANRLT 632 (791)
T ss_dssp EET--TEEEEEETTTTEEEEEETTT
T ss_pred EeC--CEEEEEECCCCEEEEEeCCC
Confidence 643 3555554 456777777666
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.93 E-value=2.3e-05 Score=84.64 Aligned_cols=216 Identities=11% Similarity=0.016 Sum_probs=127.8
Q ss_pred CcEEEEEEcCCCCEEEEEe-CCCcEEEEeCCC----CCeEEEEEecCCCCCcEEEEEEe--C-CEEEEEcCCCcEEEEEC
Q psy12614 27 KVINCIACEPKSSRLAVSR-ADQSIEIWDISE----TPHVDRVFIGDPLSNSIECLTWF--N-DRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~-~dg~v~iwd~~~----~~~~~~~~~~h~~~~~v~~l~~~--~-~~l~s~~~d~~i~vwd~ 98 (708)
..+..++|++.+..|..+. ..+.|..+++.. ..... .+.... .....|++. + +++++-...+.|.+.++
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~-~i~~~~--~~P~glavD~~~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT-VISRDI--QAPDGLAVDWIHSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCC-BCCSCC----CCCEECCCSSSBCEECCTTTSCEEEEBS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEE-EEeCCC--CCcceEEEEeeCCcEEEEeccCCeEEEEec
Confidence 4566889998777776653 457899999875 22111 222111 234556765 4 44455456789999998
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC-
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA- 175 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~- 175 (708)
........+.........++++|.+.+|+.+.. .+.|..+++...... ..+...-.....|+|+|++..|+.+..
T Consensus 483 dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~--~l~~~~l~~PnGlavd~~~~~LY~aD~~ 560 (699)
T 1n7d_A 483 KGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--SLVTENIQWPNGITLDLLSGRLYWVDSK 560 (699)
T ss_dssp SSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC--EESCSSCSSCCCEEECTTTCCEEEEETT
T ss_pred CCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee--EEEeCCCCCccEEEEeccCCEEEEEecC
Confidence 865544433333355678999997666655432 267888777654332 122222345678999998776665554
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEE
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~ 252 (708)
. .|..+++.. .....+.... ........+++..+..+++-...+.|..++..+|+.+..+.........+++
T Consensus 561 ~~~I~~~d~dG-~~~~~~~~~~----~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 561 LHSISSIDVNG-GNRKTILEDE----KRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 633 (699)
T ss_dssp TTEEEEECSSS-SCCEEECCCS----SSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCB
T ss_pred CCeEEEEccCC-CceEEEEecC----CcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEE
Confidence 4 899999864 3333332210 0012234555555533555566789999998888887777543333344443
No 301
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.89 E-value=0.0023 Score=60.28 Aligned_cols=162 Identities=11% Similarity=0.122 Sum_probs=112.2
Q ss_pred CCceEEEEEecCCCEEEEEe-CCCcEEEEEccCCcEEEEEecccc------cccEEEEEE---CCCCCEEEEec------
Q psy12614 111 SGTCWCLSVHKKKRLLAAGT-EQGHINLFQISDEGLLYEKLLDRQ------QGRILCTAW---HSSGDYLVTGC------ 174 (708)
Q Consensus 111 ~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~------~~~v~~~~~---s~d~~~l~~~~------ 174 (708)
..-..+++|++....|..++ ..++|..||...+..... .+.+- ...+..+.| .|++.++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 34455789988666666666 689999999986655422 33321 124689999 68877777543
Q ss_pred -------CC-eEEEEEcC---CCceEEEEEecccCCCC-------CceeEEEEEEccCCE-EEEEcCC-CcEEEEeCCCC
Q psy12614 175 -------AA-AVRVWDIH---KGHAIHKMSLDKSSKFS-------KNTAVWCVAFCADFT-IITGDSG-GFVRFWDGKTG 234 (708)
Q Consensus 175 -------~d-~i~iwd~~---~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~-l~~~~~d-g~i~~wd~~~~ 234 (708)
.+ .|..+|+. +++.+.......... + .......++..++|+ +++++.. +.|...+.. |
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~-~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G 168 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQD-EFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-G 168 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHH-HHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-S
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccc-cccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-C
Confidence 24 79999999 888877776431000 0 124688999999997 6777777 888888865 4
Q ss_pred eeEEEee------ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 235 VQWSDVK------THKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 235 ~~~~~~~------~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+.+..+. ......+.+++.|+|+.|++....|.+..+|+..
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 3333321 1122367999999999999988899999999875
No 302
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.88 E-value=0.0058 Score=61.77 Aligned_cols=240 Identities=10% Similarity=0.039 Sum_probs=137.8
Q ss_pred ceEEEEEec-CCCEEEEEeC-CCcEEEEEccCCcEEEEEeccc-ccccEEEEEE-------CCCCCEEEEecCC------
Q psy12614 113 TCWCLSVHK-KKRLLAAGTE-QGHINLFQISDEGLLYEKLLDR-QQGRILCTAW-------HSSGDYLVTGCAA------ 176 (708)
Q Consensus 113 ~v~~~~~s~-~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~-------s~d~~~l~~~~~d------ 176 (708)
....|+|+| +...|.++.. .+.|++.|.+++.+........ .......++| ++++++|+++...
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 356899998 3444554443 4678999999888753222111 2235899999 9999966655432
Q ss_pred --eEEEEEcCC-CceE-----EEEEecccCCCCCceeEEEEEEccC-CE-EEEEcCCCcEEEEeCC-------CCee---
Q psy12614 177 --AVRVWDIHK-GHAI-----HKMSLDKSSKFSKNTAVWCVAFCAD-FT-IITGDSGGFVRFWDGK-------TGVQ--- 236 (708)
Q Consensus 177 --~i~iwd~~~-~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~-~~-l~~~~~dg~i~~wd~~-------~~~~--- 236 (708)
.|.+++... +... ..+.. -.....++++|+ +. +++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~--------~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp 291 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA--------YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDP 291 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE--------ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCC
T ss_pred CceEEEEecCCCCceeecccceeecc--------CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecc
Confidence 366776443 2221 22221 122457788994 45 4556677889999987 5543
Q ss_pred --------EEE-ee-ccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc----
Q psy12614 237 --------WSD-VK-THKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH---- 301 (708)
Q Consensus 237 --------~~~-~~-~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---- 301 (708)
... +. +.......++|+|+|++|+.+. ..+.|+.++..... +. +.....+.+.
T Consensus 292 ~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~------~~------~~~~~~~aG~~g~~ 359 (496)
T 3kya_A 292 IVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIK------KE------FITPYNFVGGYKQS 359 (496)
T ss_dssp BGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTT------TE------ECCCEEEEEBTTBC
T ss_pred cccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCc------ce------ecccEEecCCCCCC
Confidence 112 11 1234457899999999766654 45788887665310 00 0000011110
Q ss_pred -----------ccceE-EEEE--------e-CCEEEEEcCCCeEEEEeCCCCceeecCc---------------------
Q psy12614 302 -----------EGDVK-SLAL--------H-GNRLYSGGLDSYLSLSYYPPKTLVKYPC--------------------- 339 (708)
Q Consensus 302 -----------~~~v~-~l~~--------~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~--------------------- 339 (708)
-.... .++. . +.++++-.....|+.++... .+..+.+
T Consensus 360 G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~ 438 (496)
T 3kya_A 360 GYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEG-IVSTYAGRGASTSLADGNQWGTDDGDLR 438 (496)
T ss_dssp CCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTC-BEEEEEESCTTHHHHHSCSCCCCCEETT
T ss_pred cccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCC-CEEEEecccccccccCccccccCCCCch
Confidence 01122 3333 2 45555556677888887433 3333221
Q ss_pred ---cCCCCceEEEEcC-CcEEEEE-cCCeEEEEEecCCC
Q psy12614 340 ---TLAQSTPVSLAKD-IQHVLLQ-YTSHLELWSLGSAQ 373 (708)
Q Consensus 340 ---~~~~~~~~~~s~~-~~~l~~~-~~~~i~i~~~~~~~ 373 (708)
.+..+..++++++ |.+.++- .++.|+.++++...
T Consensus 439 ~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 439 EVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp TTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC
T ss_pred hhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCc
Confidence 1233457899996 7777774 67789999887654
No 303
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.88 E-value=0.0054 Score=58.36 Aligned_cols=180 Identities=12% Similarity=0.235 Sum_probs=118.2
Q ss_pred CEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecC----CCE--EEEE-eC---CCcEEEEEcc--CCcEEEEE
Q psy12614 82 DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK----KRL--LAAG-TE---QGHINLFQIS--DEGLLYEK 149 (708)
Q Consensus 82 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~----~~~--la~~-~~---d~~i~iwd~~--~~~~~~~~ 149 (708)
.+++.....+-+.++|+ +|+.+..+.. +.++.+..-|+ |+. +|.+ .. +++|.+|++. ++.+.
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~--- 114 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ--- 114 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE---
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee---
Confidence 45666667789999999 8888888754 56777777663 222 3333 33 5789999774 45442
Q ss_pred eccc------cc-ccEEEEEE--CCC-CC-EEEEecCC-eEEEEEcC-------CCceEEEEEecccCCCCCceeEEEEE
Q psy12614 150 LLDR------QQ-GRILCTAW--HSS-GD-YLVTGCAA-AVRVWDIH-------KGHAIHKMSLDKSSKFSKNTAVWCVA 210 (708)
Q Consensus 150 ~~~~------~~-~~v~~~~~--s~d-~~-~l~~~~~d-~i~iwd~~-------~~~~~~~~~~~~~~~~~~~~~v~~~~ 210 (708)
.+.. .. ..+..+|+ +|. ++ ++++...+ .+..|++. +.+.++++..+ ..+..+.
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg--------sq~Egcv 186 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN--------SQTEGMA 186 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS--------SCEEEEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC--------CCcceEE
Confidence 2211 11 45666777 774 44 56677777 88888883 33556666653 4566777
Q ss_pred EccC-CEEEEEcCCCcEEEEeCC-----CCeeEEEee--ccccCeEEEEE--eCCCC-EEEEEe-cCCeEEEEEccC
Q psy12614 211 FCAD-FTIITGDSGGFVRFWDGK-----TGVQWSDVK--THKKDILALTV--SEDEN-YLYCAG-VDPTVVCFQRTR 275 (708)
Q Consensus 211 ~~~~-~~l~~~~~dg~i~~wd~~-----~~~~~~~~~--~~~~~i~~~~~--s~~~~-~l~~~~-~dg~i~iw~~~~ 275 (708)
..+. ++|+.+-++..|..++.+ +++.+..+. .....+..|++ .++++ +|++++ .+....+||...
T Consensus 187 vDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 187 ADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp EETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred EcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 7764 579999998778888865 345555542 22347888888 45555 666666 567999999963
No 304
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.78 E-value=0.0082 Score=58.77 Aligned_cols=232 Identities=13% Similarity=0.033 Sum_probs=120.0
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecc---cccccEEEEEECCC---CCEEEEecC-------CeE
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLD---RQQGRILCTAWHSS---GDYLVTGCA-------AAV 178 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~s~d---~~~l~~~~~-------d~i 178 (708)
...+.|+|.|||++++ +..++.|++++ +++......+. ........++|+|+ +..|+.+.. +.|
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 4578999999998554 46679999998 44432112221 22456889999998 555555443 467
Q ss_pred EEEEcCCCce--EEEE-E-ecc-cCCCCCceeEEEEEEccCCEEEEEcCC--------------CcEEEEeCCCC-----
Q psy12614 179 RVWDIHKGHA--IHKM-S-LDK-SSKFSKNTAVWCVAFCADFTIITGDSG--------------GFVRFWDGKTG----- 234 (708)
Q Consensus 179 ~iwd~~~~~~--~~~~-~-~~~-~~~~~~~~~v~~~~~~~~~~l~~~~~d--------------g~i~~wd~~~~----- 234 (708)
..++...+.. ...+ . ... ... ......++|.|||.|..+..+ |.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~---~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHG---LHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTC---CCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCC---CcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 7788765421 1111 1 110 000 122358999999985554322 56666665420
Q ss_pred -------eeEEEe-eccccCeEEEEEeC-CCCEEEEEecCCeE------EEEEccCCcccccCCCCCCC---------Cc
Q psy12614 235 -------VQWSDV-KTHKKDILALTVSE-DENYLYCAGVDPTV------VCFQRTRKPQVCSTSGPEQG---------SS 290 (708)
Q Consensus 235 -------~~~~~~-~~~~~~i~~~~~s~-~~~~l~~~~~dg~i------~iw~~~~~~~~~~~~g~~~~---------~~ 290 (708)
.....+ .++ .....++|+| ++++.++-...+.+ .+.-+.. |.... ..
T Consensus 185 pf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~--------G~nyGwp~~~g~~~~~ 255 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVP--------GGNYGWPRVVGRGNDP 255 (352)
T ss_dssp TTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECT--------TCBCCTTTCCSCCCCT
T ss_pred cccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEecc--------CCcCCCCcccCCCCCC
Confidence 010111 122 2356789999 55544432222221 2332222 11000 00
Q ss_pred c-eEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCc-------eeecCccCCCCceEEEEcCCcEEEEE
Q psy12614 291 V-WVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKT-------LVKYPCTLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 291 ~-~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~-------~~~~~~~~~~~~~~~~s~~~~~l~~~ 359 (708)
. ..+...+ .+......+++. +..+++.-..+.|...+++... ...+......+..+++.|||.+.++.
T Consensus 256 ~~~~p~~~~-~~~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 256 RYRDPLYFW-PQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp TSCCCSEEC-TTCCCEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred CCcCCeEec-CCCCCCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence 0 0011222 222345677777 6666666666777777765432 12222223455678888888777664
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.76 E-value=0.0097 Score=57.53 Aligned_cols=199 Identities=9% Similarity=0.061 Sum_probs=117.0
Q ss_pred ceeecCccCCCCceEEEEcCCcEEEEE-------------cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE
Q psy12614 333 TLVKYPCTLAQSTPVSLAKDIQHVLLQ-------------YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS 399 (708)
Q Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~~l~~~-------------~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (708)
.+..+.+.......+++.|+|..++++ .++.|.++|..+.. .....+...
T Consensus 41 ~C~~i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~-----------------~~~~~l~~~ 103 (355)
T 3sre_A 41 NCNLVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKE-----------------PAVSELEII 103 (355)
T ss_dssp CEEECTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSS-----------------CCEEECEEE
T ss_pred CCEEeCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCC-----------------CceEEEEcc
Confidence 344554334456677788888777765 57889999987432 011222222
Q ss_pred ec----CCCceEEEEeCC--CCc-EE-EE--Ec-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEE
Q psy12614 400 AV----NNATIRCSVVSN--DGK-YV-AY--ST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLL 468 (708)
Q Consensus 400 ~~----~~~~i~~~~~s~--~g~-~l-~~--~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~ 468 (708)
.. .......+.+.+ +|. +| ++ +. +.++.+|+++.......+ +..+.+.. ....+.+++.++|.+.+
T Consensus 104 g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~--~~~~~g~~-~~~pND~~v~~~G~fyv 180 (355)
T 3sre_A 104 GNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLH--LKTIRHKL-LPSVNDIVAVGPEHFYA 180 (355)
T ss_dssp CSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEE--EEEECCTT-CSSEEEEEEEETTEEEE
T ss_pred CCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEE--EeccccCC-CCCCceEEEeCCCCEEe
Confidence 11 123556666644 453 34 34 22 678999999875433222 22233321 34566799999999887
Q ss_pred EEec-----------------CCcEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe-cCCeEEEEECC-
Q psy12614 469 AVSL-----------------NGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD-RKSHVVIWKNG- 529 (708)
Q Consensus 469 ~~~~-----------------dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~iw~~~- 529 (708)
+... .|.+|.++.+..+.+ ... -..-+.++||||+++|+.+. ..+.|..|++.
T Consensus 181 t~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~--~~~------l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 181 TNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVV--AEG------FDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEE--EEE------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cCCcEeCCcccccchhhccCCccEEEEEECCeEEEe--ecC------CcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 6541 122888877643322 111 23568899999999888776 56899999986
Q ss_pred c--e--eeecCCCCCCceEEEEcC-CCCEEEEEecC
Q psy12614 530 Q--H--HASLPRYRKPSTAMAIHP-TLSTLVTVYSD 560 (708)
Q Consensus 530 ~--~--~~~~~~~~~~v~~l~~s~-d~~~l~~~~~d 560 (708)
. . ...+ .....+-.+++.+ +|++.+++..+
T Consensus 253 ~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 253 NWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp TSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred CCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 1 1 1123 2245567788887 47766655433
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.73 E-value=0.0074 Score=57.75 Aligned_cols=226 Identities=13% Similarity=0.065 Sum_probs=115.9
Q ss_pred CCCEEEEEe-CC-----CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCC-----CcEEEEECCCCe--
Q psy12614 37 KSSRLAVSR-AD-----QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQ-----GFVNEYDMRRLN-- 102 (708)
Q Consensus 37 ~~~~la~~~-~d-----g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d-----~~i~vwd~~~~~-- 102 (708)
++.+++.|+ .+ ..+.+||+.+++... +..-.....-.+++.. +..++.|+.+ ..+.+||..+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSF--LPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEE--CCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEe--CCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 455666665 32 368999998865432 2211100111222333 6666667654 468999988765
Q ss_pred -EeEEEeecCCceEEEEEecCCCEEEEEeCC-----CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 103 -IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ-----GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 103 -~~~~~~~~~~~v~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
-...-......-...+...+++.++.|+.+ ..+.+||..+.+......+......-..+.+ +++.++.|+.+
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 169 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYD 169 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCC
Confidence 222111111111111122256677777643 4688999988877543333322222222222 56666666532
Q ss_pred ------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----CcEEEEeCCCCeeEEE--eec
Q psy12614 177 ------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----GFVRFWDGKTGVQWSD--VKT 242 (708)
Q Consensus 177 ------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g~i~~wd~~~~~~~~~--~~~ 242 (708)
.+.+||+.+.+-...-.... ...-.+++.. +++ ++.|+.+ ..+.+||+.+.+-... +..
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~p~------~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 242 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPMAT------KRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTT 242 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSS------CCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSS
T ss_pred CCcccceEEEEeCCCCcEEeCCCCCc------ccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCC
Confidence 58899988765433211111 1111122222 555 5566553 4689999987754332 221
Q ss_pred cccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccC
Q psy12614 243 HKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTR 275 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~ 275 (708)
.......+. -+++.++.|+.+ ..+.+||..+
T Consensus 243 ~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 243 PRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp CCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred cccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 112222222 266677777665 3577888876
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.72 E-value=0.0054 Score=58.72 Aligned_cols=222 Identities=14% Similarity=0.117 Sum_probs=115.1
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC-----CcEEEEEccCCc---EEEEEecccccccEEEEE
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ-----GHINLFQISDEG---LLYEKLLDRQQGRILCTA 162 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~ 162 (708)
..+.++|..+.+-...-..........+...++..++.|+.+ ..+.+||..+++ ......+......-..+.
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~ 110 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT 110 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE
Confidence 468889988865322111111111112222356677777754 468999998887 543233322222222222
Q ss_pred ECCCCCEEEEecCC------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----CcEEEEe
Q psy12614 163 WHSSGDYLVTGCAA------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----GFVRFWD 230 (708)
Q Consensus 163 ~s~d~~~l~~~~~d------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g~i~~wd 230 (708)
+ +++.++.|+.+ .+.+||+.+.+-...-.... . ... .+++. -+++ ++.|+.+ ..+.+||
T Consensus 111 ~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~----r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d 181 (301)
T 2vpj_A 111 L--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQT-A----REG-AGLVV-ASGVIYCLGGYDGLNILNSVEKYD 181 (301)
T ss_dssp E--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSS-C----CBS-CEEEE-ETTEEEEECCBCSSCBCCCEEEEE
T ss_pred E--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCC-C----ccc-ceEEE-ECCEEEEECCCCCCcccceEEEEe
Confidence 2 56666666532 58899988766443322221 0 111 11222 2566 5555543 4688999
Q ss_pred CCCCeeEEE--eeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc
Q psy12614 231 GKTGVQWSD--VKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG 303 (708)
Q Consensus 231 ~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 303 (708)
..+++-... +.........+. -+++.++.|+.+ ..+.+||..+ . .|.....+.....
T Consensus 182 ~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~--------~------~W~~~~~~p~~r~ 245 (301)
T 2vpj_A 182 PHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRT--------D------SWTTVTSMTTPRC 245 (301)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTT--------T------EEEEECCCSSCCB
T ss_pred CCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCC--------C------cEEECCCCCCccc
Confidence 887754332 221111222222 256666777664 4688899877 3 4655543332222
Q ss_pred ceEEEEEeCCEEEEEcCC-----CeEEEEeCCCCceeec
Q psy12614 304 DVKSLALHGNRLYSGGLD-----SYLSLSYYPPKTLVKY 337 (708)
Q Consensus 304 ~v~~l~~~~~~l~s~~~d-----~~i~iw~~~~~~~~~~ 337 (708)
....+.+.+..++.|+.+ ..+.+||+.+.....+
T Consensus 246 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 246 YVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred ceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEc
Confidence 223333336666777655 3577788877664443
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.71 E-value=0.0099 Score=57.47 Aligned_cols=215 Identities=11% Similarity=0.080 Sum_probs=122.5
Q ss_pred eeeeeeccCCCCcEEEEEEcCCCCEEEEE------------eCCCcEEEEeCCC--CCeEEEEEecC-C--CCCcEEEEE
Q psy12614 16 VHNIKFYAPEPKVINCIACEPKSSRLAVS------------RADQSIEIWDISE--TPHVDRVFIGD-P--LSNSIECLT 78 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~~~~la~~------------~~dg~v~iwd~~~--~~~~~~~~~~h-~--~~~~v~~l~ 78 (708)
...|+.+.+-....-.+++.|+|..++++ ..+|.|.++|..+ .+.....+.+. . .......+.
T Consensus 39 ~~~C~~i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~ 118 (355)
T 3sre_A 39 LPNCNLVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGIS 118 (355)
T ss_dssp CSCEEECTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEE
T ss_pred CCCCEEeCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeE
Confidence 34678877634445566788987554444 1689999999984 34333344442 1 014677777
Q ss_pred Ee----CC-EEEEEc-C--CCcEEEEECCCC--e--EeEEEeec-CCceEEEEEecCCCEEEEEeC--------------
Q psy12614 79 WF----ND-RLFSGG-L--QGFVNEYDMRRL--N--IKSSTAVT-SGTCWCLSVHKKKRLLAAGTE-------------- 131 (708)
Q Consensus 79 ~~----~~-~l~s~~-~--d~~i~vwd~~~~--~--~~~~~~~~-~~~v~~~~~s~~~~~la~~~~-------------- 131 (708)
+. +. +|+++. . +.+|.+|+++.. . .+..+.+. -...+.+++.++|.+.++...
T Consensus 119 ~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~ 198 (355)
T 3sre_A 119 TFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHL 198 (355)
T ss_dssp EEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHT
T ss_pred EEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhc
Confidence 74 22 455553 2 567888876653 2 22333322 245789999999987776431
Q ss_pred ---CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCC-CceEEEEEecccCCCCCcee
Q psy12614 132 ---QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHK-GHAIHKMSLDKSSKFSKNTA 205 (708)
Q Consensus 132 ---d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~ 205 (708)
.|.|..+| .++.. .+...-...+.++|+||++.|+.+... .|..|++.. ++....-.... ...
T Consensus 199 ~~~~g~vyr~d--~~~~~---~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~------~g~ 267 (355)
T 3sre_A 199 GLAWSFVTYYS--PNDVR---VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSF------DTL 267 (355)
T ss_dssp TCCCEEEEEEC--TTCCE---EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC------SSE
T ss_pred cCCccEEEEEE--CCeEE---EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeC------CCC
Confidence 23444444 34432 222223456899999999988777644 899999863 33322111111 455
Q ss_pred EEEEEEcc-CCEEEE-EcCC-CcEEEEeCC--CCeeEEEee
Q psy12614 206 VWCVAFCA-DFTIIT-GDSG-GFVRFWDGK--TGVQWSDVK 241 (708)
Q Consensus 206 v~~~~~~~-~~~l~~-~~~d-g~i~~wd~~--~~~~~~~~~ 241 (708)
.-.+++.+ +|.+.+ +..+ +.|..|+.. .+..+..+.
T Consensus 268 PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 268 VDNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp EEEEEECTTTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred CceEEEeCCCCcEEEEecCCceEEEEECCCCCCCCEEEEEE
Confidence 67788888 587544 4333 345555543 244444443
No 309
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.70 E-value=0.012 Score=55.93 Aligned_cols=198 Identities=9% Similarity=0.146 Sum_probs=122.0
Q ss_pred EEEEcC---CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe------CC---EEEEEc-C--CCcEEE
Q psy12614 31 CIACEP---KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF------ND---RLFSGG-L--QGFVNE 95 (708)
Q Consensus 31 ~~~~s~---~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~------~~---~l~s~~-~--d~~i~v 95 (708)
++-.+| ...+++.....+-+.+||+ +|+.+. .+.. +.++.+..- |+ ++++.. . +++|.+
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~-~~~~----g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~v 103 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLH-SYNT----GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEI 103 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEE-EECC----SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEE
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEE-EccC----CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEE
Confidence 344455 3355555567788999999 777776 5553 345555544 22 233333 3 589999
Q ss_pred EECC--CCeEeEEEee------cC-CceEEEEE--ecC-CC-EEEEEeCCCcEEEEEcc---CCcEE--EEEeccccccc
Q psy12614 96 YDMR--RLNIKSSTAV------TS-GTCWCLSV--HKK-KR-LLAAGTEQGHINLFQIS---DEGLL--YEKLLDRQQGR 157 (708)
Q Consensus 96 wd~~--~~~~~~~~~~------~~-~~v~~~~~--s~~-~~-~la~~~~d~~i~iwd~~---~~~~~--~~~~~~~~~~~ 157 (708)
|++. ++. +..+.. .. ..+..+++ +|. +. ++++...+|.+..|++. .+... ..+.+.- .+.
T Consensus 104 f~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq 181 (355)
T 3amr_A 104 YAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQ 181 (355)
T ss_dssp EEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSC
T ss_pred EEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCC
Confidence 9773 433 444421 11 45667888 774 44 57777889999999984 23221 1133332 456
Q ss_pred EEEEEECCCCCEEEEecCC-eEEEEEcC-----CCceEEEEEecccCCCCCceeEEEEEE--ccCC--EEEEEc-CCCcE
Q psy12614 158 ILCTAWHSSGDYLVTGCAA-AVRVWDIH-----KGHAIHKMSLDKSSKFSKNTAVWCVAF--CADF--TIITGD-SGGFV 226 (708)
Q Consensus 158 v~~~~~s~d~~~l~~~~~d-~i~iwd~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~--~l~~~~-~dg~i 226 (708)
+..+...+...+|+.+-++ .|..++.+ +++.+..+... .....+..|++ .+++ .+++.+ .+...
T Consensus 182 ~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g-----~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 182 TEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGR-----HLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSS-----SBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred cceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCC-----ccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 8889999999999999999 88888855 23444333222 11345777777 4454 344444 57799
Q ss_pred EEEeCC-CCeeEEEee
Q psy12614 227 RFWDGK-TGVQWSDVK 241 (708)
Q Consensus 227 ~~wd~~-~~~~~~~~~ 241 (708)
.+||.+ +.+.+..+.
T Consensus 257 ~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 257 AIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEESSTTCCEEEEEE
T ss_pred EEEECCCCCcEEEEEE
Confidence 999986 556666553
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.63 E-value=0.023 Score=54.36 Aligned_cols=224 Identities=12% Similarity=0.068 Sum_probs=116.3
Q ss_pred CEEEEEeC--CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCC----CcEEEEECCCCeEeEEEeecC
Q psy12614 39 SRLAVSRA--DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQ----GFVNEYDMRRLNIKSSTAVTS 111 (708)
Q Consensus 39 ~~la~~~~--dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d----~~i~vwd~~~~~~~~~~~~~~ 111 (708)
.+++.|+. ...+.+||..+++-.. +..-.....-.+++.. +..++.|+.+ ..+.++|..+.+-...-....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTD--IRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEE--CCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEec--CCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34556654 3579999998876432 2111100111222223 6666677654 678899998876432221111
Q ss_pred CceEEEEEecCCCEEEEEeCC------CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC---------C
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQ------GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA---------A 176 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~---------d 176 (708)
......+..-+++.++.|+.+ ..+.+||..+.+......+......-..+.+ +++.++.|+. -
T Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 91 PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEEC
T ss_pred cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCccccc
Confidence 111111222366777777754 4589999998877533222221111122222 5666666652 2
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----CcEEEEeCCCCeeEEE--eeccccCe
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----GFVRFWDGKTGVQWSD--VKTHKKDI 247 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g~i~~wd~~~~~~~~~--~~~~~~~i 247 (708)
.+.+||+.+.+-...-.... ...-.+++.. +++ ++.|+.+ ..+.+||+.+.+-... +.......
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~------~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 241 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIE------ARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTV 241 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSS------CCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCC
T ss_pred ceEEEeCCCCCeEEECCCccc------hhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccce
Confidence 58899998775433221111 1111122222 565 5555543 4688999987653322 22222222
Q ss_pred EEEEEeCCCCEEEEEecC-----CeEEEEEccC
Q psy12614 248 LALTVSEDENYLYCAGVD-----PTVVCFQRTR 275 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~ 275 (708)
.++.+ +++.++.|+.+ ..+.+||..+
T Consensus 242 ~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 242 KCAAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp EEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred eEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 33333 66677777754 4688888877
No 311
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.62 E-value=0.059 Score=52.60 Aligned_cols=246 Identities=13% Similarity=0.093 Sum_probs=122.0
Q ss_pred eeEEEEEEccCCEEEEEcCCCcEEEEeCCCCee--EEEee---ccccCeEEEEEeCC---CCEEEEEecC------CeEE
Q psy12614 204 TAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQ--WSDVK---THKKDILALTVSED---ENYLYCAGVD------PTVV 269 (708)
Q Consensus 204 ~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--~~~~~---~~~~~i~~~~~s~~---~~~l~~~~~d------g~i~ 269 (708)
...+.++|.|||+++++...|.|++++ +++. +..+. ........++++|+ +..|+++... +.|.
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 446799999999988888889999998 4442 22221 12356789999998 5566655442 5677
Q ss_pred EEEccCCcccccCCCCCCCCcceEEeEEEe---ccccceEEEEEe--CCEEEEEcC-------------CCeEEEEeCCC
Q psy12614 270 CFQRTRKPQVCSTSGPEQGSSVWVRSVNRV---IHEGDVKSLALH--GNRLYSGGL-------------DSYLSLSYYPP 331 (708)
Q Consensus 270 iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~v~~l~~~--~~~l~s~~~-------------d~~i~iw~~~~ 331 (708)
.|+... +. ....+ .....+. ...+....++|. |.+.++.+. .+.|..++.+.
T Consensus 109 r~~~~~--------~~-~~~~~-~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 109 RLRHLG--------ER-GVLDR-VVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp EEEECS--------SC-EEEEE-EEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred EEEeCC--------CC-cCceE-EEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 777764 21 00000 0111122 112234578887 555554332 14566666554
Q ss_pred Cc-------------eeecCccCCCCceEEEEc-CCcEEEEEcC-CeE------EEEEecCCCC---CCCCCCCCCCccc
Q psy12614 332 KT-------------LVKYPCTLAQSTPVSLAK-DIQHVLLQYT-SHL------ELWSLGSAQS---TDLSSHSNTTGVP 387 (708)
Q Consensus 332 ~~-------------~~~~~~~~~~~~~~~~s~-~~~~l~~~~~-~~i------~i~~~~~~~~---~~~~~~~~~~~~~ 387 (708)
.. ...+......+..++++| ++.+.++... +.+ .+..+..+.. ....+.... +
T Consensus 179 ~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~---~ 255 (352)
T 2ism_A 179 EPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGND---P 255 (352)
T ss_dssp SBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCC---T
T ss_pred CCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCC---C
Confidence 11 011111123356789999 6777776432 221 2333333221 000010000 0
Q ss_pred CCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCe
Q psy12614 388 LLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTL 466 (708)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~ 466 (708)
-...+ +... ........++| .+|.++++.. .+.|...+++.............+-.. ...+..+++.|||.+
T Consensus 256 ~~~~p--~~~~--~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~--~~rp~~v~~~pdG~l 328 (352)
T 2ism_A 256 RYRDP--LYFW--PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSG--FGRLREVQVGPDGAL 328 (352)
T ss_dssp TSCCC--SEEC--TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEES--SCCEEEEEECTTSCE
T ss_pred CCcCC--eEec--CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheeccc--CCCeeEEEECCCCcE
Confidence 00001 1111 22234566777 4676655543 667777777653321101111111111 235677999999977
Q ss_pred EEEEe
Q psy12614 467 LLAVS 471 (708)
Q Consensus 467 l~~~~ 471 (708)
.++..
T Consensus 329 yv~~~ 333 (352)
T 2ism_A 329 YVTTS 333 (352)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 76654
No 312
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.58 E-value=0.033 Score=53.33 Aligned_cols=230 Identities=11% Similarity=0.050 Sum_probs=121.0
Q ss_pred EEEEEcC--CCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC----CcEEEEEccCCcEEEEEecccccc
Q psy12614 83 RLFSGGL--QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ----GHINLFQISDEGLLYEKLLDRQQG 156 (708)
Q Consensus 83 ~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~ 156 (708)
.++.|+. ...+.+||..+.+-...-..........+..-++..++.|+.+ ..+.+||..+++......+.....
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 93 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRD 93 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcccc
Confidence 3444543 4678899988876332111111111111222366677777754 678999999887754333332222
Q ss_pred cEEEEEECCCCCEEEEecCC-------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC------
Q psy12614 157 RILCTAWHSSGDYLVTGCAA-------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS------ 222 (708)
Q Consensus 157 ~v~~~~~s~d~~~l~~~~~d-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~------ 222 (708)
.-..+.+ +++.++.|+.+ .+.+||..+.+-...-.... ...-.+++. -+++ ++.|+.
T Consensus 94 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~------~r~~~~~~~-~~~~iyv~GG~~~~~~~ 164 (306)
T 3ii7_A 94 SLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT------QRCSHGMVE-ANGLIYVCGGSLGNNVS 164 (306)
T ss_dssp SCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS------CCBSCEEEE-ETTEEEEECCEESCTTT
T ss_pred ceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC------CcceeEEEE-ECCEEEEECCCCCCCCc
Confidence 2222222 56666666532 48899988775433211111 111111222 2566 455543
Q ss_pred ---CCcEEEEeCCCCeeEEE--eeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccCCcccccCCCCCCCCcce
Q psy12614 223 ---GGFVRFWDGKTGVQWSD--VKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTRKPQVCSTSGPEQGSSVW 292 (708)
Q Consensus 223 ---dg~i~~wd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~g~~~~~~~~ 292 (708)
...+.+||..+.+-... +......- +++.. +++.++.|+.+ ..+.+||..+ ..|
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~--------------~~W 228 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARKNH-GLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKL--------------NEW 228 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE-TTEEEEECCEETTEEBCCEEEEETTT--------------TEE
T ss_pred ccccceEEEeCCCCCeEEECCCccchhhcc-eEEEE-CCEEEEEeCCCCCCCCceEEEeeCCC--------------CcE
Confidence 35588999987754322 22111111 22222 56666666653 3688888877 346
Q ss_pred EEeEEEeccccceEEEEEeCCEEEEEcCC-----CeEEEEeCCCCceeec
Q psy12614 293 VRSVNRVIHEGDVKSLALHGNRLYSGGLD-----SYLSLSYYPPKTLVKY 337 (708)
Q Consensus 293 ~~~~~~~~~~~~v~~l~~~~~~l~s~~~d-----~~i~iw~~~~~~~~~~ 337 (708)
.....+.........+.+.+..++.|+.+ ..+.+||+.+.....+
T Consensus 229 ~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 278 (306)
T 3ii7_A 229 KMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVAN 278 (306)
T ss_dssp EECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEE
T ss_pred EECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeC
Confidence 65544433333333333447777778754 4688899988774443
No 313
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.57 E-value=0.012 Score=55.39 Aligned_cols=161 Identities=12% Similarity=0.126 Sum_probs=104.2
Q ss_pred CcEEEEEEe--CCEEEEE-cCCCcEEEEECCCCeEeEEEeec-----C--CceEEEEE---ecCCCEEEEEe--------
Q psy12614 72 NSIECLTWF--NDRLFSG-GLQGFVNEYDMRRLNIKSSTAVT-----S--GTCWCLSV---HKKKRLLAAGT-------- 130 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~-~~d~~i~vwd~~~~~~~~~~~~~-----~--~~v~~~~~---s~~~~~la~~~-------- 130 (708)
.--.+++|. ...+..+ -..++|..||...+......... . ..+..+.+ .|+++++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 455678898 4555554 47999999999866443332211 1 14678999 68877777543
Q ss_pred -----CCCcEEEEEcc---CCcEEEEEeccccc-----------ccEEEEEECCCCCEEEEecCC--eEEEEEcCCCceE
Q psy12614 131 -----EQGHINLFQIS---DEGLLYEKLLDRQQ-----------GRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAI 189 (708)
Q Consensus 131 -----~d~~i~iwd~~---~~~~~~~~~~~~~~-----------~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~ 189 (708)
.+..|..+|+. +++......+.... .....++..++|+.-++++.. .|...+.. |+.+
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~ 171 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTV 171 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCCE
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEE
Confidence 26779999999 77766545554322 348899999999988876654 55555543 3433
Q ss_pred EEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCC
Q psy12614 190 HKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTG 234 (708)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~ 234 (708)
..+....... ......+.|++.|+| .|++....|.|..+|+.+.
T Consensus 172 ~~~~~~~~~~-~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 172 STFAWESGNG-GQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEEECCCCS-SSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eeeeecCCCc-ccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 3332221000 112346689999999 4777766999999998754
No 314
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.57 E-value=0.052 Score=50.61 Aligned_cols=211 Identities=10% Similarity=0.127 Sum_probs=135.4
Q ss_pred CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEE
Q psy12614 132 QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAF 211 (708)
Q Consensus 132 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 211 (708)
+.+|.|.|+.++....++.... + +.-.+|..+.||.-...++.++|+++.+.+...... ..|.-=.|
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~A-d----sAIMnP~~~ViALrag~~LQiFnletK~klks~~~~--------e~VvfWkW 114 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISA-D----SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMT--------DDVTFWKW 114 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCC-S----EEEECSSSSEEEEEETTEEEEEETTTTEEEEEEECS--------SCEEEEEE
T ss_pred CCEEEEEECCCCCCcccccccc-c----eeeeCCCccEEEEecCCeEEEechHHhhhhcceecC--------CccEEEEe
Confidence 3478899998876553344432 2 334589888888776449999999999998888764 34555567
Q ss_pred ccCCEEEEEcCCCcEEEEeCCCC-eeEEEeecc----ccCeEEEEEeCCCCEEEEEec-------CCeEEEEEccCCccc
Q psy12614 212 CADFTIITGDSGGFVRFWDGKTG-VQWSDVKTH----KKDILALTVSEDENYLYCAGV-------DPTVVCFQRTRKPQV 279 (708)
Q Consensus 212 ~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~~-------dg~i~iw~~~~~~~~ 279 (708)
..+..++..+ +..|+.|++... .+.+.+.-| ...|.....+++.++++..+- .|.+.+|..+.
T Consensus 115 is~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er---- 189 (365)
T 2xzh_A 115 ISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---- 189 (365)
T ss_dssp CSSSEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT----
T ss_pred cCCCeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc----
Confidence 7676654444 357999998743 445555433 357788888999998875442 37899999987
Q ss_pred ccCCCCCCCCcceEEeEEEeccccceEEEEEeCC-----EEEEEcC---CCeEEEEeCCCC--c-------eeec-Ccc-
Q psy12614 280 CSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGN-----RLYSGGL---DSYLSLSYYPPK--T-------LVKY-PCT- 340 (708)
Q Consensus 280 ~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-----~l~s~~~---d~~i~iw~~~~~--~-------~~~~-~~~- 340 (708)
+ ....+.+|...-..+...|+ +++.+.. .+.+.+-++... . ...+ ..+
T Consensus 190 ----~---------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppe 256 (365)
T 2xzh_A 190 ----K---------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE 256 (365)
T ss_dssp ----T---------EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTT
T ss_pred ----c---------ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCcc
Confidence 4 45667777665544444421 2222222 258888888543 1 1111 101
Q ss_pred --CCCCceEEEEcCCcEEEE-EcCCeEEEEEecCCC
Q psy12614 341 --LAQSTPVSLAKDIQHVLL-QYTSHLELWSLGSAQ 373 (708)
Q Consensus 341 --~~~~~~~~~s~~~~~l~~-~~~~~i~i~~~~~~~ 373 (708)
..-+-++.+|+.-.++.. ..-|.+++||++++.
T Consensus 257 a~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 257 AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 292 (365)
T ss_dssp CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred ccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCc
Confidence 112235666776666554 789999999999977
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.55 E-value=0.02 Score=54.74 Aligned_cols=222 Identities=12% Similarity=0.118 Sum_probs=115.4
Q ss_pred CcEEEEECCCCeEeEEEeecCCce-EEEEEecCCCEEEEEeCC-----CcEEEEEccCCcEEEEEecccccccEEEEEEC
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTC-WCLSVHKKKRLLAAGTEQ-----GHINLFQISDEGLLYEKLLDRQQGRILCTAWH 164 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v-~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 164 (708)
..+..+|+.+.+-...-....... .+++ .-++..++.|+.+ ..+.+||..+.+......+......-..+.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~- 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMV-YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL- 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEE-EECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE-
Confidence 458888988865332211111111 1222 2266677777654 3588999998877543333222222222222
Q ss_pred CCCCEEEEecCC------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC-------CCcEEEEe
Q psy12614 165 SSGDYLVTGCAA------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS-------GGFVRFWD 230 (708)
Q Consensus 165 ~d~~~l~~~~~d------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~-------dg~i~~wd 230 (708)
+++.++.|+.+ .+.+||+.+.+-...-.... ...-.+++. -+++ ++.|+. ...+.+||
T Consensus 108 -~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~------~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd 179 (302)
T 2xn4_A 108 -NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNT------RRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYN 179 (302)
T ss_dssp -TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSS------CCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEE
T ss_pred -CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCC------cccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEe
Confidence 56666666532 47788887765433221111 111112222 2565 555543 24588999
Q ss_pred CCCCeeEEE--eeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc
Q psy12614 231 GKTGVQWSD--VKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG 303 (708)
Q Consensus 231 ~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 303 (708)
..+++-... +.........+. -+++.++.|+.+ ..+.+||..+ ..|.....+.....
T Consensus 180 ~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~--------------~~W~~~~~~~~~r~ 243 (302)
T 2xn4_A 180 ATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTT--------------NAWRQVADMNMCRR 243 (302)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTT--------------TEEEEECCCSSCCB
T ss_pred CCCCcEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCC--------------CCEeeCCCCCCccc
Confidence 987754332 222122222222 256677777654 3688898877 34655543332222
Q ss_pred ceEEEEEeCCEEEEEcCCC-----eEEEEeCCCCceeecC
Q psy12614 304 DVKSLALHGNRLYSGGLDS-----YLSLSYYPPKTLVKYP 338 (708)
Q Consensus 304 ~v~~l~~~~~~l~s~~~d~-----~i~iw~~~~~~~~~~~ 338 (708)
....+.+.+..++.|+.++ .+.+||+.+.....+.
T Consensus 244 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 244 NAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred cCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 2222333366777777653 4889999888766654
No 316
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.41 E-value=0.032 Score=53.22 Aligned_cols=225 Identities=13% Similarity=0.125 Sum_probs=114.1
Q ss_pred CCEEEEEeCC----CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCC-----CcEEEEECCCCeEeEEE
Q psy12614 38 SSRLAVSRAD----QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQ-----GFVNEYDMRRLNIKSST 107 (708)
Q Consensus 38 ~~~la~~~~d----g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d-----~~i~vwd~~~~~~~~~~ 107 (708)
+.+++.|+.+ ..+..||+.+++... +..-.....-.+++.. +..++.|+.+ ..+.+||..+.+-...-
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQ--VAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEE--ECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeE--cccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 4455566543 368899998865432 2211100111223333 5566666654 35889998887533221
Q ss_pred eecCCceEEEEEecCCCEEEEEeCCC-----cEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC-------
Q psy12614 108 AVTSGTCWCLSVHKKKRLLAAGTEQG-----HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA------- 175 (708)
Q Consensus 108 ~~~~~~v~~~~~s~~~~~la~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~------- 175 (708)
..........+..-++..++.|+.++ .+.+||..+.+......+.........+.+ +++.++.|+.
T Consensus 94 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 171 (302)
T 2xn4_A 94 NMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQC 171 (302)
T ss_dssp CCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEE
T ss_pred CCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCcc
Confidence 11111111111222667777777553 578899988877543333222222222222 5666666653
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----CcEEEEeCCCCeeEEE--eeccccC
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----GFVRFWDGKTGVQWSD--VKTHKKD 246 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g~i~~wd~~~~~~~~~--~~~~~~~ 246 (708)
- .+.+||+.+.+-...-.... ...-.+++.. +++ ++.|+.+ ..+.+||..+++-... +......
T Consensus 172 ~~~~~~yd~~~~~W~~~~~~p~------~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~ 244 (302)
T 2xn4_A 172 LSTVECYNATTNEWTYIAEMST------RRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRN 244 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSS------CCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred ccEEEEEeCCCCcEEECCCCcc------ccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcccc
Confidence 2 58899988765433221111 1111122222 555 5566553 4689999987654322 2211111
Q ss_pred eEEEEEeCCCCEEEEEecCC-----eEEEEEccC
Q psy12614 247 ILALTVSEDENYLYCAGVDP-----TVVCFQRTR 275 (708)
Q Consensus 247 i~~~~~s~~~~~l~~~~~dg-----~i~iw~~~~ 275 (708)
.. ++. -+++.++.|+.++ .+.+||..+
T Consensus 245 ~~-~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 245 AG-VCA-VNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp CE-EEE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred Ce-EEE-ECCEEEEECCcCCCcccccEEEEcCCC
Confidence 12 222 2666777777653 488898877
No 317
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.37 E-value=0.035 Score=53.35 Aligned_cols=227 Identities=15% Similarity=0.015 Sum_probs=118.0
Q ss_pred EEEEcCCCcEEEEECCCCeEeE-EEeecCCceEEEEEecCCCEEEEEeC-----C------CcEEEEEccCCcEEEEEec
Q psy12614 84 LFSGGLQGFVNEYDMRRLNIKS-STAVTSGTCWCLSVHKKKRLLAAGTE-----Q------GHINLFQISDEGLLYEKLL 151 (708)
Q Consensus 84 l~s~~~d~~i~vwd~~~~~~~~-~~~~~~~~v~~~~~s~~~~~la~~~~-----d------~~i~iwd~~~~~~~~~~~~ 151 (708)
++.|+ ..+.+||..+++-.. .+..........+...++..++.|+. . ..+.+||..+++......+
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 34444 578999999887432 11111123333444557778888773 1 1278889888876422222
Q ss_pred ccccccEEEEEECCCCCEEEEecC---------CeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc
Q psy12614 152 DRQQGRILCTAWHSSGDYLVTGCA---------AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD 221 (708)
Q Consensus 152 ~~~~~~v~~~~~s~d~~~l~~~~~---------d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~ 221 (708)
......-..+.+ ++..++.|+. +.+.+||..+.+-...-..+. ...-.+++. -+++ ++.|+
T Consensus 86 p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~------~r~~~~~~~-~~~~iyv~GG 156 (315)
T 4asc_A 86 PSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY------VVYGHTVLS-HMDLVYVIGG 156 (315)
T ss_dssp SSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSS------CCBSCEEEE-ETTEEEEECC
T ss_pred CcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCC------cccceeEEE-ECCEEEEEeC
Confidence 211111112222 5566666662 158899988765332211111 111112222 3555 55665
Q ss_pred C-C-----CcEEEEeCCCCeeEEE--eeccccCeEEEEEeCCCCEEEEEecCC-----eEEEEEccCCcccccCCCCCCC
Q psy12614 222 S-G-----GFVRFWDGKTGVQWSD--VKTHKKDILALTVSEDENYLYCAGVDP-----TVVCFQRTRKPQVCSTSGPEQG 288 (708)
Q Consensus 222 ~-d-----g~i~~wd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~g~~~~ 288 (708)
. + ..+.+||..+.+-... +......-.++. -+++.++.|+.++ .+.+||..+
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~------------- 221 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITD------------- 221 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTT-------------
T ss_pred CCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCC-------------
Confidence 4 2 4689999887653322 221111222222 2666777777654 578888877
Q ss_pred CcceEEeEEEeccccceEEEEEeCCEEEEEcCCC--------------eEEEEeCCCCceeec
Q psy12614 289 SSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDS--------------YLSLSYYPPKTLVKY 337 (708)
Q Consensus 289 ~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~--------------~i~iw~~~~~~~~~~ 337 (708)
..|.....+.........+.+.+.+++.|+.++ .+.+||+.+.....+
T Consensus 222 -~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 222 -NKWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp -TEEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred -CeEEECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 356655443322222333333366777777542 366788877765444
No 318
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.37 E-value=0.12 Score=50.32 Aligned_cols=151 Identities=11% Similarity=0.038 Sum_probs=80.6
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEE-EEec----ccccccEEEEEECCC---CCEEEEec-C-------
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLY-EKLL----DRQQGRILCTAWHSS---GDYLVTGC-A------- 175 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~-~~~~----~~~~~~v~~~~~s~d---~~~l~~~~-~------- 175 (708)
...+.|+|.|+|+.|.++...|.|++++.. +.... ...+ ....+....++|+|+ +..|+.+. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 457899999999844455678999999853 33210 0111 122345789999996 55555442 2
Q ss_pred C-eEEEEEcCCC--c--eEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCC--------------CcEEEEeCCCCe-
Q psy12614 176 A-AVRVWDIHKG--H--AIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSG--------------GFVRFWDGKTGV- 235 (708)
Q Consensus 176 d-~i~iwd~~~~--~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d--------------g~i~~wd~~~~~- 235 (708)
. .|..+++..+ . ....+................++|.|||.|..+..+ |.|.-++....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 3 5777776543 1 112221110000000122357999999985444322 467777764210
Q ss_pred -----------eEEEe-eccccCeEEEEEeCCCCEEEEEec
Q psy12614 236 -----------QWSDV-KTHKKDILALTVSEDENYLYCAGV 264 (708)
Q Consensus 236 -----------~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~ 264 (708)
....+ .++ .....++|+|+...|+++..
T Consensus 177 ~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEE
T ss_pred CCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEec
Confidence 11111 122 34678999994445555543
No 319
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.37 E-value=0.00078 Score=72.69 Aligned_cols=217 Identities=8% Similarity=-0.051 Sum_probs=125.1
Q ss_pred CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCC---ceEEEEEecccCCCCCcee
Q psy12614 131 EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKG---HAIHKMSLDKSSKFSKNTA 205 (708)
Q Consensus 131 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~ 205 (708)
..+.|+..++.+.+.. ..+ .....+..++|.+.+..|+.+... .|..+++... .....+... ....
T Consensus 384 ~~~~I~~id~~~~~~~--~~~-~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~------~~~~ 454 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYT--SLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR------DIQA 454 (699)
T ss_dssp CTTC-CEECTTSCCEE--CCS-CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS------CC--
T ss_pred CccceEEEeCCCCcce--eee-ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC------CCCC
Confidence 3457888888877664 222 233456789999988777776544 8999998651 111111100 0223
Q ss_pred EEEEEEccC-CEEE-EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEec--CCeEEEEEccCCccccc
Q psy12614 206 VWCVAFCAD-FTII-TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGV--DPTVVCFQRTRKPQVCS 281 (708)
Q Consensus 206 v~~~~~~~~-~~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~ 281 (708)
...+++.+. ++|+ +-...+.|.++++........+.........++++|.+.+|+.+.. .+.|..+++..
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG------ 528 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG------ 528 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS------
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC------
Confidence 456777754 4544 4445688999998754443333333345678899997766665543 26777777654
Q ss_pred CCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCc---cCCCCceEEEEcCCcE
Q psy12614 282 TSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPC---TLAQSTPVSLAKDIQH 355 (708)
Q Consensus 282 ~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~---~~~~~~~~~~s~~~~~ 355 (708)
.. ........-.....|+++ +.++++-+..+.|..+++.+...+.+.. ....+..+++..+ .+
T Consensus 529 --~~--------~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~l 597 (699)
T 1n7d_A 529 --VD--------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KV 597 (699)
T ss_dssp --CC--------CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EE
T ss_pred --CC--------eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EE
Confidence 11 001111112345678887 4566666677899999998755444331 2344556776654 33
Q ss_pred EEE-EcCCeEEEEEecCCC
Q psy12614 356 VLL-QYTSHLELWSLGSAQ 373 (708)
Q Consensus 356 l~~-~~~~~i~i~~~~~~~ 373 (708)
+++ ...+.|..++..++.
T Consensus 598 ywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 598 FWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp EEECSTTTCEEEEETTTEE
T ss_pred EEEeCCCCeEEEEEccCCC
Confidence 333 356778888765543
No 320
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.30 E-value=0.031 Score=53.56 Aligned_cols=231 Identities=11% Similarity=0.058 Sum_probs=118.4
Q ss_pred CCEEEEEcC----CCcEEEEECCCCeEeEEEeecCCce-EEEEEecCCCEEEEEeC----C-----CcEEEEEccCCcEE
Q psy12614 81 NDRLFSGGL----QGFVNEYDMRRLNIKSSTAVTSGTC-WCLSVHKKKRLLAAGTE----Q-----GHINLFQISDEGLL 146 (708)
Q Consensus 81 ~~~l~s~~~----d~~i~vwd~~~~~~~~~~~~~~~~v-~~~~~s~~~~~la~~~~----d-----~~i~iwd~~~~~~~ 146 (708)
+..++.|+. -..+.++|..+.+-...-....... .+++ .-++..++.|+. + ..+.+||..+.+..
T Consensus 25 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 25 RLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred CEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence 455555653 2468889988865332211111111 1222 225666666665 2 46889999888765
Q ss_pred EEEecccccccEEEEEECCCCCEEEEecC------CeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEE
Q psy12614 147 YEKLLDRQQGRILCTAWHSSGDYLVTGCA------AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IIT 219 (708)
Q Consensus 147 ~~~~~~~~~~~v~~~~~s~d~~~l~~~~~------d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~ 219 (708)
....+......-..+.+ +++.++.|+. +.+.+||..+.+-...-.... . ...- +++.. +++ ++.
T Consensus 104 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~----r~~~-~~~~~-~~~iyv~ 174 (308)
T 1zgk_A 104 PCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLT-R----RIGV-GVAVL-NRLLYAV 174 (308)
T ss_dssp ECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSS-C----CBSC-EEEEE-TTEEEEE
T ss_pred ECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCc-c----ccce-EEEEE-CCEEEEE
Confidence 32222221122222222 5666666653 258889988765433211111 0 1111 12222 565 555
Q ss_pred EcCC-----CcEEEEeCCCCeeEEE--eeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccCCcccccCCCCCC
Q psy12614 220 GDSG-----GFVRFWDGKTGVQWSD--VKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTRKPQVCSTSGPEQ 287 (708)
Q Consensus 220 ~~~d-----g~i~~wd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~g~~~ 287 (708)
|+.+ ..+.+||+.+.+-... +.........+.+ +++.++.|+.+ ..+.+||+.+
T Consensus 175 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~------------ 240 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVET------------ 240 (308)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT------------
T ss_pred eCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCC------------
Confidence 5543 4689999887654322 2211122222222 56667777654 4688999877
Q ss_pred CCcceEEeEEEeccccceEEEEEeCCEEEEEcCC-----CeEEEEeCCCCceeec
Q psy12614 288 GSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLD-----SYLSLSYYPPKTLVKY 337 (708)
Q Consensus 288 ~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d-----~~i~iw~~~~~~~~~~ 337 (708)
..|.....+.........+...+.+++.|+.+ ..+.+||+.+.....+
T Consensus 241 --~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 241 --ETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp --TEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred --CcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 34655543332222222333336666777654 3577888887765544
No 321
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.25 E-value=0.032 Score=53.41 Aligned_cols=228 Identities=10% Similarity=0.032 Sum_probs=116.1
Q ss_pred EcCCCCEEEEEeCC----CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcC----C-----CcEEEEECC
Q psy12614 34 CEPKSSRLAVSRAD----QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGL----Q-----GFVNEYDMR 99 (708)
Q Consensus 34 ~s~~~~~la~~~~d----g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~----d-----~~i~vwd~~ 99 (708)
..-++.+++.|+.+ ..+.+||..+++... +..-.....-.+++.. +..++.|+. + ..+.++|..
T Consensus 21 ~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 21 PKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLR--LADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEE--CCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred cCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeE--CCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 34466777777632 368999998876432 2211100111223333 555566665 2 468889988
Q ss_pred CCeEeEEEeecCCce-EEEEEecCCCEEEEEeCC-----CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEe
Q psy12614 100 RLNIKSSTAVTSGTC-WCLSVHKKKRLLAAGTEQ-----GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG 173 (708)
Q Consensus 100 ~~~~~~~~~~~~~~v-~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~ 173 (708)
+.+-...-....... .+++. -+++.++.|+.+ ..+.+||..+.+......+......-..+.+ +++.++.|
T Consensus 99 ~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 175 (308)
T 1zgk_A 99 TNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVG 175 (308)
T ss_dssp TTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred CCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEe
Confidence 865322111111111 11222 266677776543 4688999988876532222221122222233 56666666
Q ss_pred cCC------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----CcEEEEeCCCCeeEEE--
Q psy12614 174 CAA------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----GFVRFWDGKTGVQWSD-- 239 (708)
Q Consensus 174 ~~d------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g~i~~wd~~~~~~~~~-- 239 (708)
+.+ .+.+||+.+.+-...-.... ...-.+++.. +++ ++.|+.+ ..+.+||+.+.+-...
T Consensus 176 G~~~~~~~~~~~~yd~~~~~W~~~~~~p~------~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 248 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERNEWRMITAMNT------IRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAP 248 (308)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEECCCCSS------CCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCC
T ss_pred CCCCCCcCceEEEEeCCCCeEeeCCCCCC------ccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCC
Confidence 542 58899987765432211111 1111122222 565 5566554 5699999987754332
Q ss_pred eeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccC
Q psy12614 240 VKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTR 275 (708)
Q Consensus 240 ~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~ 275 (708)
+........ ++. -+++.++.|+.+ ..+.+||..+
T Consensus 249 ~p~~r~~~~-~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 249 MKHRRSALG-ITV-HQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp CSSCCBSCE-EEE-ETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCCCccceE-EEE-ECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 221112222 222 256677777654 4578888877
No 322
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.22 E-value=0.18 Score=49.14 Aligned_cols=211 Identities=10% Similarity=0.119 Sum_probs=136.3
Q ss_pred CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEE
Q psy12614 132 QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAF 211 (708)
Q Consensus 132 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 211 (708)
+.+|.|.|+.++..+.++.... -+.-.+|..+.||.-...++.++|+++...+...... + .|.-=.|
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~A-----dsAIMnP~~~iiALrag~~lQiFnle~K~klks~~~~-------e-~VvfWkW 113 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMT-------D-DVTFWKW 113 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCC-----SEEEECSSSSCEEEEETTEEEEEETTTTEEEEEEECS-------S-CCCEEEE
T ss_pred CCeEEEEECCCCCcceeccccc-----ceeeeCCCCcEEEEecCCeEEEEchHHhhhhcceecC-------C-CceEEEe
Confidence 4478899998876553344432 2345678888888776459999999999998888764 2 3333455
Q ss_pred ccCCEEEEEcCCCcEEEEeCCCC-eeEEEeecc----ccCeEEEEEeCCCCEEEEEec-------CCeEEEEEccCCccc
Q psy12614 212 CADFTIITGDSGGFVRFWDGKTG-VQWSDVKTH----KKDILALTVSEDENYLYCAGV-------DPTVVCFQRTRKPQV 279 (708)
Q Consensus 212 ~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~~-------dg~i~iw~~~~~~~~ 279 (708)
..+..++..+ +..|+-|++... .+.+.+.-| ...|.....+++.++++..+- .|.+.+|..+.
T Consensus 114 is~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er---- 188 (494)
T 1bpo_A 114 ISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---- 188 (494)
T ss_dssp EETTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT----
T ss_pred cCCCeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc----
Confidence 5566554444 457999998643 445555433 357788888999999875442 47899999987
Q ss_pred ccCCCCCCCCcceEEeEEEeccccceEEEEEeC-----CEEEEEcC---CCeEEEEeCCCCc---------eeecC-cc-
Q psy12614 280 CSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHG-----NRLYSGGL---DSYLSLSYYPPKT---------LVKYP-CT- 340 (708)
Q Consensus 280 ~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~-----~~l~s~~~---d~~i~iw~~~~~~---------~~~~~-~~- 340 (708)
+ ....+.+|......+...| ..++.+.. .+.+.+-++.... ...+. .+
T Consensus 189 ----~---------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe 255 (494)
T 1bpo_A 189 ----K---------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE 255 (494)
T ss_dssp ----C---------CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTT
T ss_pred ----c---------ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcc
Confidence 4 3566777766655554442 23333333 2688888885431 11111 01
Q ss_pred --CCCCceEEEEcCCcEEEE-EcCCeEEEEEecCCC
Q psy12614 341 --LAQSTPVSLAKDIQHVLL-QYTSHLELWSLGSAQ 373 (708)
Q Consensus 341 --~~~~~~~~~s~~~~~l~~-~~~~~i~i~~~~~~~ 373 (708)
..-+-++.+|+.-.++.. ..-|.+++||++++.
T Consensus 256 ~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt 291 (494)
T 1bpo_A 256 AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (494)
T ss_dssp STTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred cccCceeEEEecccCCEEEEEecCceEEEEecccce
Confidence 112235677777666655 789999999999977
No 323
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.18 E-value=0.078 Score=50.89 Aligned_cols=208 Identities=7% Similarity=-0.003 Sum_probs=109.1
Q ss_pred EEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC--------C----eEEEEEcCCCceEEEEE
Q psy12614 126 LAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA--------A----AVRVWDIHKGHAIHKMS 193 (708)
Q Consensus 126 la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~--------d----~i~iwd~~~~~~~~~~~ 193 (708)
++.|+ ..+.+||..+++... ..+.....+....+...++..++.|+. . .+.+||..+++-...-.
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 44454 579999999988753 333222222333333457777777773 1 27788888765432211
Q ss_pred ecccCCCCCceeEEEEEEccCCE-EEEEcCC--------CcEEEEeCCCCeeEEE--eeccccCeEEEEEeCCCCEEEEE
Q psy12614 194 LDKSSKFSKNTAVWCVAFCADFT-IITGDSG--------GFVRFWDGKTGVQWSD--VKTHKKDILALTVSEDENYLYCA 262 (708)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d--------g~i~~wd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~ 262 (708)
.+. ...-.+++.. +++ ++.|+.+ ..+.+||..+++-... ++.....- +++. -+++.++.|
T Consensus 85 ~p~------~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~G 155 (315)
T 4asc_A 85 LPS------PRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLS-HMDLVYVIG 155 (315)
T ss_dssp BSS------CEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEEC
T ss_pred CCc------chhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEE-ECCEEEEEe
Confidence 110 1111122222 555 5555532 4689999987753222 22111121 2222 355666677
Q ss_pred ec-C-----CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCC-----eEEEEeCCC
Q psy12614 263 GV-D-----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDS-----YLSLSYYPP 331 (708)
Q Consensus 263 ~~-d-----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~-----~i~iw~~~~ 331 (708)
+. + ..+.+||..+ ..|.....+......-.++.+.+..++.|+.++ .+.+||+.+
T Consensus 156 G~~~~~~~~~~~~~yd~~~--------------~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKK--------------FEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp CBCTTSCBCCCEEEEETTT--------------TEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred CCCCCCcccceEEEEeCCC--------------CeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCC
Confidence 65 2 4688888877 346555433322222233333477777777654 588899988
Q ss_pred CceeecCc-cCCCCceEEEEcCCcEEEEE
Q psy12614 332 KTLVKYPC-TLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 332 ~~~~~~~~-~~~~~~~~~~s~~~~~l~~~ 359 (708)
.....+.. +.+.....+..-++++++.+
T Consensus 222 ~~W~~~~~~p~~r~~~~~~~~~~~l~v~G 250 (315)
T 4asc_A 222 NKWAPFEAFPQERSSLSLVSLVGTLYAIG 250 (315)
T ss_dssp TEEEEECCCSSCCBSCEEEEETTEEEEEE
T ss_pred CeEEECCCCCCcccceeEEEECCEEEEEC
Confidence 87665552 12222223334466666654
No 324
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.12 E-value=0.23 Score=48.38 Aligned_cols=245 Identities=9% Similarity=0.024 Sum_probs=123.9
Q ss_pred ceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCe-eEEEee---ccccCeEEEEEeCC---CCEEEEEec----C----Ce
Q psy12614 203 NTAVWCVAFCADFTIITGDSGGFVRFWDGKTGV-QWSDVK---THKKDILALTVSED---ENYLYCAGV----D----PT 267 (708)
Q Consensus 203 ~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~~~~~~---~~~~~i~~~~~s~~---~~~l~~~~~----d----g~ 267 (708)
-...+.++|.|||+++++..+|.|++++ .+++ .+..+. ........++++|+ +..|+++.. + +.
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCCeEEEEcCCCeEEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 3457899999999988888889999997 4555 222221 12356789999998 556665543 2 56
Q ss_pred EEEEEccCCcccccCCCCCCCCcceEE-eEEEe-ccccceEEEEEe--CCEEEEEcC-------------CCeEEEEeCC
Q psy12614 268 VVCFQRTRKPQVCSTSGPEQGSSVWVR-SVNRV-IHEGDVKSLALH--GNRLYSGGL-------------DSYLSLSYYP 330 (708)
Q Consensus 268 i~iw~~~~~~~~~~~~g~~~~~~~~~~-~~~~~-~~~~~v~~l~~~--~~~l~s~~~-------------d~~i~iw~~~ 330 (708)
|..|+... +.. ....... ...+. ...+....|+|. +.++++.+. .+.|..++.+
T Consensus 107 v~r~~~~~--------~~~-~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 107 VIRGRLDG--------STF-KLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE 177 (354)
T ss_dssp EEEEEECS--------SSC-CEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT
T ss_pred EEEEEECC--------CCc-CcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC
Confidence 77777665 210 0000001 11122 112234567887 655555332 2455555554
Q ss_pred CCc--------eeecCccCCCCceEEEEc-CCcEEEEEcCC----eEEEEEecCCCC---CCCCCCC--CCCcccCCCCc
Q psy12614 331 PKT--------LVKYPCTLAQSTPVSLAK-DIQHVLLQYTS----HLELWSLGSAQS---TDLSSHS--NTTGVPLLSFP 392 (708)
Q Consensus 331 ~~~--------~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~----~i~i~~~~~~~~---~~~~~~~--~~~~~~~~~~~ 392 (708)
... ...+......+..++++| ++++.++.... .|.+. ..+.. ....+.. .... .+
T Consensus 178 G~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~-----~p 250 (354)
T 3a9g_A 178 GRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNII--LKGGNYGWPLATGKAGRGEFV-----DP 250 (354)
T ss_dssp SCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEE--CTTCBCCTTTCCSCCCCTTSC-----CC
T ss_pred CCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEe--cCCCcCCCCcccCCCCCCCCc-----CC
Confidence 431 111111233556799999 67777764221 23332 22221 0000100 0000 00
Q ss_pred eEEEEEEecCCCceEEEEeC-------CCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCC
Q psy12614 393 RLIVKMSAVNNATIRCSVVS-------NDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADS 464 (708)
Q Consensus 393 ~~~~~~~~~~~~~i~~~~~s-------~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~ 464 (708)
+... .........++|. .+|.++++.. .+.|...++...........+ +.+. ...+..+++.|||
T Consensus 251 --~~~~-~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~--~~~~--~~rp~~v~~~pDG 323 (354)
T 3a9g_A 251 --VIDT-GSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTF--FKNV--FGRLRDVVIDDDG 323 (354)
T ss_dssp --SEEC-TTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEE--CTTT--SCCEEEEEECTTS
T ss_pred --Eeec-CCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeee--ccCC--CCCeeEEEECCCC
Confidence 0110 0112345677773 5676666644 667777776642111111221 2221 2256679999999
Q ss_pred CeEEEEe
Q psy12614 465 TLLLAVS 471 (708)
Q Consensus 465 ~~l~~~~ 471 (708)
.+.++..
T Consensus 324 ~lyv~~~ 330 (354)
T 3a9g_A 324 GILISTS 330 (354)
T ss_dssp CEEEEEC
T ss_pred cEEEEEe
Confidence 7666554
No 325
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.09 E-value=0.012 Score=57.23 Aligned_cols=150 Identities=14% Similarity=0.101 Sum_probs=98.0
Q ss_pred EeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCC---e-
Q psy12614 410 VVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSS---L- 484 (708)
Q Consensus 410 ~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~---~- 484 (708)
....+|..+++..++.||.-++..+. .++.++ ++.+..-..|..+..+|+|.+||..+..+. |..+..+. .
T Consensus 27 ~~~~n~t~i~~a~~n~iR~~~i~~~~---~Yk~L~-~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 27 FSSQNGTRIVFIQDNIIRWYNVLTDS---LYHSLN-FSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVED 102 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEETTTCS---SCEEEE-CTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCC
T ss_pred EEEcCCCEEEEEECCEEEEEECCCCC---cceEEe-cCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcc
Confidence 34567888888888889888776422 333322 443121113555999999999999987776 66665221 0
Q ss_pred ------EEEEEecC--CC-CCccCcceEEEEECCC---CcEEEEEecCCeEEEEECCc----eeeec---------CCCC
Q psy12614 485 ------EIKYCVDP--YK-SNLMSDVISLVQMSEC---KQYIVCADRKSHVVIWKNGQ----HHASL---------PRYR 539 (708)
Q Consensus 485 ------~~~~~~~~--~~-~~~~~~~i~~~~~s~~---~~~l~~~~~d~~i~iw~~~~----~~~~~---------~~~~ 539 (708)
-..+.+.. .. .. ...|..+.|+|- +..|++-..|+.|++||+.+ +. .+ ....
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~--~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~ 179 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGP--KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARV 179 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--C--CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSC
T ss_pred cccccccceeEEEcCCcccCC--CCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCccc
Confidence 01122221 11 01 467999999994 55788888999999999993 11 22 2233
Q ss_pred CCceEEEEcCCCCEEEEEe--cCCcEEEE
Q psy12614 540 KPSTAMAIHPTLSTLVTVY--SDHRIVEF 566 (708)
Q Consensus 540 ~~v~~l~~s~d~~~l~~~~--~dg~i~vw 566 (708)
..|.+++|.+++=.|...+ ..|.|+-.
T Consensus 180 ~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 180 NDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 6789999999887777755 77887654
No 326
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.04 E-value=0.13 Score=49.44 Aligned_cols=221 Identities=12% Similarity=0.036 Sum_probs=111.5
Q ss_pred cEEEEECCCCeEeEE-EeecCCceEEEEEecCCCEEEEEeC----CC-------cEEEEEccCCcEEEEEecccccccEE
Q psy12614 92 FVNEYDMRRLNIKSS-TAVTSGTCWCLSVHKKKRLLAAGTE----QG-------HINLFQISDEGLLYEKLLDRQQGRIL 159 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~la~~~~----d~-------~i~iwd~~~~~~~~~~~~~~~~~~v~ 159 (708)
.+..||..+.+-... +..........+...++..++.|+. ++ .+..||..+.+......+........
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 378899988774431 1111122233344557777888873 11 17788988887753222221111112
Q ss_pred EEEECCCCCEEEEecCC--------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC------CC
Q psy12614 160 CTAWHSSGDYLVTGCAA--------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS------GG 224 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~~d--------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~------dg 224 (708)
.+.+ +++.++.|+.+ .+.++|..+.+-...-..+. ...-.+++. .+++ ++.|+. ..
T Consensus 105 ~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~------~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 175 (318)
T 2woz_A 105 LGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPI------KVYGHNVIS-HNGMIYCLGGKTDDKKCTN 175 (318)
T ss_dssp EEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSS------CEESCEEEE-ETTEEEEECCEESSSCBCC
T ss_pred eEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCC------cccccEEEE-ECCEEEEEcCCCCCCCccc
Confidence 2222 55666666531 47888887765433221110 111112222 3666 455553 24
Q ss_pred cEEEEeCCCCeeEEE--eeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccCCcccccCCCCCCCCcceEEeEE
Q psy12614 225 FVRFWDGKTGVQWSD--VKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297 (708)
Q Consensus 225 ~i~~wd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~ 297 (708)
.+.+||..+.+-... +....... +++. -+++.++.|+.+ ..+.+||..+ . .|.....
T Consensus 176 ~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~--------~------~W~~~~~ 239 (318)
T 2woz_A 176 RVFIYNPKKGDWKDLAPMKTPRSMF-GVAI-HKGKIVIAGGVTEDGLSASVEAFDLKT--------N------KWEVMTE 239 (318)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEEETTEEEEEEEEEETTT--------C------CEEECCC
T ss_pred eEEEEcCCCCEEEECCCCCCCcccc-eEEE-ECCEEEEEcCcCCCCccceEEEEECCC--------C------eEEECCC
Confidence 699999987754322 22111222 2222 256667777653 3567888876 3 4665544
Q ss_pred EeccccceEEEEEeCCEEEEEcCC--------------CeEEEEeCCCCceeec
Q psy12614 298 RVIHEGDVKSLALHGNRLYSGGLD--------------SYLSLSYYPPKTLVKY 337 (708)
Q Consensus 298 ~~~~~~~v~~l~~~~~~l~s~~~d--------------~~i~iw~~~~~~~~~~ 337 (708)
+.........+.+.+.+++.|+.+ ..+.+||+.+.....+
T Consensus 240 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 240 FPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 333222222333336666666654 3466777777664443
No 327
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.03 E-value=0.11 Score=50.64 Aligned_cols=150 Identities=16% Similarity=0.172 Sum_probs=95.8
Q ss_pred EEecCCCEEEEEeCCCcEEEEEccCC-cEEEEEeccc--ccccEEEEEECCCCCEEEEecCCeEEEEEcCCCc-------
Q psy12614 118 SVHKKKRLLAAGTEQGHINLFQISDE-GLLYEKLLDR--QQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGH------- 187 (708)
Q Consensus 118 ~~s~~~~~la~~~~d~~i~iwd~~~~-~~~~~~~~~~--~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~------- 187 (708)
..+.+|..++++ .++.||.-++..+ .... ..+.. .-..|..+..+|+|++||..+...|.|-.+..+.
T Consensus 27 ~~~~n~t~i~~a-~~n~iR~~~i~~~~~Yk~-L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 27 FSSQNGTRIVFI-QDNIIRWYNVLTDSLYHS-LNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp EEETTTTEEEEE-ETTEEEEEETTTCSSCEE-EECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHH
T ss_pred EEEcCCCEEEEE-ECCEEEEEECCCCCcceE-EecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccc
Confidence 344566666664 3477888887733 2311 12221 1235778999999999999988888888876322
Q ss_pred -----eEEEEEecccCCCCCceeEEEEEEccCC----EEEEEcCCCcEEEEeCCCC--eeEEEee---------ccccCe
Q psy12614 188 -----AIHKMSLDKSSKFSKNTAVWCVAFCADF----TIITGDSGGFVRFWDGKTG--VQWSDVK---------THKKDI 247 (708)
Q Consensus 188 -----~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~l~~~~~dg~i~~wd~~~~--~~~~~~~---------~~~~~i 247 (708)
..+.+..+.... .....|..+.|+|-+ .+++-..|+.|++||+... ++. .++ .....|
T Consensus 105 ~~~~~q~~ty~l~~~~~-~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEV-GPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHTTEEEEEEGGGCC---CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCE
T ss_pred cccccceeEEEcCCccc-CCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceE
Confidence 123344332110 125779999999955 5999999999999999752 122 221 223678
Q ss_pred EEEEEeCCCCEEEEEe--cCCeEEEE
Q psy12614 248 LALTVSEDENYLYCAG--VDPTVVCF 271 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~--~dg~i~iw 271 (708)
.+++|.+++-.|+..+ ..|.|+-.
T Consensus 183 ~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 183 TDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 8899988776666644 56666544
No 328
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.99 E-value=0.25 Score=48.15 Aligned_cols=230 Identities=11% Similarity=-0.007 Sum_probs=118.1
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEE------EEEecCCCCCcEEEEEEe-----CCEEEEEcC------
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVD------RVFIGDPLSNSIECLTWF-----NDRLFSGGL------ 89 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~------~~~~~h~~~~~v~~l~~~-----~~~l~s~~~------ 89 (708)
.....|+|.|+|+.|.++...|.|.+++... .... ....... .....|+++ +.+|+.+..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~--~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQ--GGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTT--CSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCC--CCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 3467999999999344455679999998543 2110 0111122 567899998 355554432
Q ss_pred --CCcEEEEECCCC--e--EeEE-Eeec------CCceEEEEEecCCCEEEEEeCC-------------CcEEEEEccCC
Q psy12614 90 --QGFVNEYDMRRL--N--IKSS-TAVT------SGTCWCLSVHKKKRLLAAGTEQ-------------GHINLFQISDE 143 (708)
Q Consensus 90 --d~~i~vwd~~~~--~--~~~~-~~~~------~~~v~~~~~s~~~~~la~~~~d-------------~~i~iwd~~~~ 143 (708)
...|..|++... + .... +... ...-..|+|.|||.+.++.+.. |.|.-++....
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 235777776543 1 1111 1111 1123579999999655554332 45666665532
Q ss_pred -------------cEEEEEecccccccEEEEEECC-CCCEEEEecC-C-eEEEEEcCCCceE----E-------------
Q psy12614 144 -------------GLLYEKLLDRQQGRILCTAWHS-SGDYLVTGCA-A-AVRVWDIHKGHAI----H------------- 190 (708)
Q Consensus 144 -------------~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~-d-~i~iwd~~~~~~~----~------------- 190 (708)
... ....++ .....++|.| ++.+.++-.. + .=.|.-+..+... .
T Consensus 175 ~p~~npf~~~~~~~~~--i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~ 251 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAE--IWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPE 251 (353)
T ss_dssp CCTTCTTTTSTTSCTT--EEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTT
T ss_pred CCCCCCCcCCCCCCcc--EEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCc
Confidence 000 011122 2367899999 5654443221 1 1122111111110 0
Q ss_pred -------EEEecccCCCCCceeEEEEEEcc-------CCEE-EEEcCCCcEEEEeCCCCeeEEE---eeccccCeEEEEE
Q psy12614 191 -------KMSLDKSSKFSKNTAVWCVAFCA-------DFTI-ITGDSGGFVRFWDGKTGVQWSD---VKTHKKDILALTV 252 (708)
Q Consensus 191 -------~~~~~~~~~~~~~~~v~~~~~~~-------~~~l-~~~~~dg~i~~wd~~~~~~~~~---~~~~~~~i~~~~~ 252 (708)
.+..+. ..+.+...+..++|.. +|.+ ++....+.|...++..++.... +......+..+++
T Consensus 252 ~~~~~~~~~~~P~-~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~ 330 (353)
T 2g8s_A 252 AKGEIVAGTEQPV-FYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRT 330 (353)
T ss_dssp CCBSSCTTSCCCS-EEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEE
T ss_pred ccCCCCCCccCCe-EEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEE
Confidence 000000 0001123566777763 4664 4445567888888776654332 2222357899999
Q ss_pred eCCCCEEEEEe
Q psy12614 253 SEDENYLYCAG 263 (708)
Q Consensus 253 s~~~~~l~~~~ 263 (708)
.|||.+.++..
T Consensus 331 ~pdG~lyv~td 341 (353)
T 2g8s_A 331 GPDGYLYVLTD 341 (353)
T ss_dssp CTTSCEEEEEC
T ss_pred CCCCcEEEEEe
Confidence 99998666443
No 329
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.96 E-value=0.0064 Score=53.11 Aligned_cols=147 Identities=7% Similarity=-0.038 Sum_probs=88.0
Q ss_pred eeEEEEEecCCCeEEEEecCCcEEEecCCCeEE------EEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEE
Q psy12614 454 IFTHVLISADSTLLLAVSLNGPLYIIDLSSLEI------KYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWK 527 (708)
Q Consensus 454 ~i~~~~~s~d~~~l~~~~~dg~i~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~ 527 (708)
.++.++|+|||.+.++ .+|.||..+..+... -..+-.. + -..-.++.|.|+|.+.++ .||.|+-++
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~-G---w~~F~a~~fD~~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNG-G---WNQFQFLFFDPNGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECS-C---GGGCSEEEECTTSCEEEE--ETTEEEEES
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccc-c---cccceEEEECCCCCEEEe--CCCEEEEeC
Confidence 4556999999997766 777799887643110 1111110 1 112478999999998888 569888776
Q ss_pred CCceee--------ec-CCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhh-cCCCCeeE
Q psy12614 528 NGQHHA--------SL-PRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWL-SRQLPVLG 597 (708)
Q Consensus 528 ~~~~~~--------~~-~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ 597 (708)
-.+... .+ ..-=..+..|.|.|+|.+-++. |+.++-+..+++....|.... ..+. +.-..-..
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~-----~~~g~~g~~~yr~ 186 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARA-----TKIGQGGWDTFKF 186 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHC-----EEEESSSGGGEEE
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCccccccc-----ceeccCCcceEEE
Confidence 542100 11 1111467999999999977766 887766656655555454211 0111 12224455
Q ss_pred EEeCCCCCceEEEEcCeeEE
Q psy12614 598 IEFDPQDSSLIYLMDDSALC 617 (708)
Q Consensus 598 l~~s~~~~~l~~~~~d~~i~ 617 (708)
+.|++++...++. ++.++
T Consensus 187 l~f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 187 LFFSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp EEECTTSCEEEEE--TTEEE
T ss_pred EEECCCCcEEEEe--CCeEE
Confidence 7799999866665 77443
No 330
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.84 E-value=0.23 Score=47.68 Aligned_cols=221 Identities=13% Similarity=0.098 Sum_probs=110.2
Q ss_pred EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcC----CC-------cEEEEECCCCeEeEEE
Q psy12614 40 RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGL----QG-------FVNEYDMRRLNIKSST 107 (708)
Q Consensus 40 ~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~----d~-------~i~vwd~~~~~~~~~~ 107 (708)
+++.|+. .+..||..+++-....+.... ...-.+++.. +..++.|+. ++ .+.++|..+.+-...-
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQI-PRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTS-CSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhcccc--ceEEECCCCCceecccCCccC-CccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 3444443 489999998775443333212 1333444444 777777773 12 1778888876533211
Q ss_pred eecCCc-eEEEEEecCCCEEEEEeCC-------CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC----
Q psy12614 108 AVTSGT-CWCLSVHKKKRLLAAGTEQ-------GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA---- 175 (708)
Q Consensus 108 ~~~~~~-v~~~~~s~~~~~la~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~---- 175 (708)
...... -.+++. -++..++.|+.+ ..+.+||..+.+......+......- +++. .+++.++.|+.
T Consensus 95 ~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 95 PLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDK 171 (318)
T ss_dssp CBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSS
T ss_pred CCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCC
Confidence 111111 112222 256677777653 35888999888775322222111111 1222 35666666653
Q ss_pred --C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----CcEEEEeCCCCeeEEE--eeccc
Q psy12614 176 --A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----GFVRFWDGKTGVQWSD--VKTHK 244 (708)
Q Consensus 176 --d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g~i~~wd~~~~~~~~~--~~~~~ 244 (708)
- .+.+||+.+.+-...-.... ...-.+++.. +++ ++.|+.+ ..+.+||+.+.+-... +....
T Consensus 172 ~~~~~~~~yd~~~~~W~~~~~~p~------~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 244 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWKDLAPMKT------PRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQER 244 (318)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSS------CCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCC
T ss_pred CccceEEEEcCCCCEEEECCCCCC------CcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcc
Confidence 1 58999998765433221111 1111122222 555 5566543 3577899887653322 22111
Q ss_pred cCeEEEEEeCCCCEEEEEecC--------------CeEEEEEccC
Q psy12614 245 KDILALTVSEDENYLYCAGVD--------------PTVVCFQRTR 275 (708)
Q Consensus 245 ~~i~~~~~s~~~~~l~~~~~d--------------g~i~iw~~~~ 275 (708)
... +++. -+++.++.|+.+ ..+.+||..+
T Consensus 245 ~~~-~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 245 SSI-SLVS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp BSC-EEEE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT
T ss_pred cce-EEEE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC
Confidence 222 2222 355666676653 3577888776
No 331
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.83 E-value=0.37 Score=46.25 Aligned_cols=248 Identities=12% Similarity=0.042 Sum_probs=126.2
Q ss_pred EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec----ccccccEEEEEECCC---CCEEEEe---cC
Q psy12614 106 STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL----DRQQGRILCTAWHSS---GDYLVTG---CA 175 (708)
Q Consensus 106 ~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~----~~~~~~v~~~~~s~d---~~~l~~~---~~ 175 (708)
.+...-...+.|+|.|||.++++--..|.|++++..+++......+ ....+....|+|+|+ +..|+.. ..
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 3333345788999999998776654489999998766655322222 223567899999996 3445432 23
Q ss_pred C-eEEEEEcCCCc--------eEEEEE-ecccCCCCCceeEEEEEEccCCEEEEE-c-------------CCCcEEEEeC
Q psy12614 176 A-AVRVWDIHKGH--------AIHKMS-LDKSSKFSKNTAVWCVAFCADFTIITG-D-------------SGGFVRFWDG 231 (708)
Q Consensus 176 d-~i~iwd~~~~~--------~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~l~~~-~-------------~dg~i~~wd~ 231 (708)
+ .|.-|.+..+. ....+. ... .. ......++|.|||.|..+ + ..|.|.-.+.
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~-~~---~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~ 181 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK-GV---IHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTP 181 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECC-CS---SCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECT
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCC-CC---CccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeC
Confidence 4 67777665421 111111 111 01 223457999999974433 2 1356666665
Q ss_pred CCC---------eeEEEeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCccc--ccCCCCCCCCcceEEeEEEe
Q psy12614 232 KTG---------VQWSDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQV--CSTSGPEQGSSVWVRSVNRV 299 (708)
Q Consensus 232 ~~~---------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~--~~~~g~~~~~~~~~~~~~~~ 299 (708)
... ..+.. .+|. ....++|+|+|++.++-. .++.=.+--+.....- -...+.........+...+.
T Consensus 182 dG~ip~~nPf~~~~i~a-~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~ 259 (347)
T 3das_A 182 DGEPAPGNPFPGSPVYS-YGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWS 259 (347)
T ss_dssp TSSBCTTCSSTTCCEEE-BCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEEC
T ss_pred CCCccCCCCCCCCeEEe-eCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecC
Confidence 421 11111 2343 446899999876554321 2222223222220000 00001000000001222333
Q ss_pred ccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCce----eec-CccCCCCceEEEEcCCcEEEEE
Q psy12614 300 IHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTL----VKY-PCTLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 300 ~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~----~~~-~~~~~~~~~~~~s~~~~~l~~~ 359 (708)
.+......++|. +..++..-..+.|....+..... ..+ .+.......++..|||.+.++.
T Consensus 260 ~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~t 325 (347)
T 3das_A 260 TDEASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVT 325 (347)
T ss_dssp TTTCCEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEE
T ss_pred CCCCCCcceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEE
Confidence 232466788888 66666665666666666654421 111 1122344567888888776664
No 332
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.78 E-value=0.045 Score=61.75 Aligned_cols=233 Identities=9% Similarity=0.119 Sum_probs=140.5
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCC-CeEeEEEe
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRR-LNIKSSTA 108 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~-~~~~~~~~ 108 (708)
+.-.+|..+.||.=. ..++.|+|+.+...+ ..|.+..+|.--.|- .+.|+-.+ +..|.-|++.. ..+.+.+.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnl~~k~kl----ks~~~~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fd 143 (1630)
T 1xi4_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKM----KAHTMTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFD 143 (1630)
T ss_pred hhccCCCcceEEEec-CCeEEEeehHHhhhh----cccccCCCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHh
Confidence 344577777777754 568999999986644 344444677777777 55555443 46799999974 34544444
Q ss_pred ec----CCceEEEEEecCCCEEEEEe-------CCCcEEEEEccCCcEEEEEecccccccEEEEEEC--C-CCCEEEEec
Q psy12614 109 VT----SGTCWCLSVHKKKRLLAAGT-------EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWH--S-SGDYLVTGC 174 (708)
Q Consensus 109 ~~----~~~v~~~~~s~~~~~la~~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s--~-d~~~l~~~~ 174 (708)
.| +..|..-..+++.++++..+ -.|.+.+|..+.+.. +.+.||.+....+... + ..+.++.+.
T Consensus 144 R~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s---Q~iegha~~F~~~~~~~~~~~~~l~~f~~ 220 (1630)
T 1xi4_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS---QPIEGHAASFAQFKMEGNAEESTLFCFAV 220 (1630)
T ss_pred cchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc---hhhhHhHhhhheeccCCCCCCceEEEEEE
Confidence 44 46788888899999887543 257889999887655 5677776655444432 1 122333332
Q ss_pred C---C-eEEEEEcCCC---ceE-----EEEEecccCCCCCceeEEEEEEccC-CEEEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 175 A---A-AVRVWDIHKG---HAI-----HKMSLDKSSKFSKNTAVWCVAFCAD-FTIITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 175 ~---d-~i~iwd~~~~---~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
. + .++|.++... ... ..+..+.. ...+...++..++. |-+...+.-|.|.+||+.+|.++..-+
T Consensus 221 ~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~---~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE---AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred ecCCCceEEEEecCCCccCCCCCccccccccCCcc---cccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 2 2 6777776432 110 00111100 01233344555543 346677888999999999998876655
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
-....|...+......-++.....|.|.--.+..
T Consensus 298 is~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 298 ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred ccCCceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence 4455555555444434455555666666665554
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.78 E-value=0.41 Score=45.98 Aligned_cols=233 Identities=11% Similarity=0.057 Sum_probs=128.9
Q ss_pred eeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEE-EE----ecCCCCCcEEEEEEe-----CCEEE
Q psy12614 16 VHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDR-VF----IGDPLSNSIECLTWF-----NDRLF 85 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~-~~----~~h~~~~~v~~l~~~-----~~~l~ 85 (708)
...+..+...-.....|+|.|||+++++-...|.|.+++..++..... .+ .... .....|+++ +..|+
T Consensus 21 ~~~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~--~GllGia~~Pdf~~~g~lY 98 (347)
T 3das_A 21 VKVLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGE--GGLLGIALSPDYASDHMVY 98 (347)
T ss_dssp EEEEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTT--BSEEEEEECTTHHHHCEEE
T ss_pred CceeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCC--CCceeeEeccccccCCEEE
Confidence 334445555556678999999999877765589999998766654221 11 1223 678999997 35554
Q ss_pred EE---cCCCcEEEEECCCC----------eEe-EEEe-ecCCceEEEEEecCCCEEEEEeC-------------CCcEEE
Q psy12614 86 SG---GLQGFVNEYDMRRL----------NIK-SSTA-VTSGTCWCLSVHKKKRLLAAGTE-------------QGHINL 137 (708)
Q Consensus 86 s~---~~d~~i~vwd~~~~----------~~~-~~~~-~~~~~v~~~~~s~~~~~la~~~~-------------d~~i~i 137 (708)
.. ..++.|.-|.+..+ +.+ ..+. .....-..|+|.|||.+.++.+. .|.|.-
T Consensus 99 v~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlR 178 (347)
T 3das_A 99 AYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILR 178 (347)
T ss_dssp EEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEE
T ss_pred EEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEE
Confidence 43 24566777766542 111 1121 11123457999999987776442 244444
Q ss_pred EEccCC--------cEEEEEecccccccEEEEEECCCCCEEEEec-CC---eEEEEEcCCCce-----------------
Q psy12614 138 FQISDE--------GLLYEKLLDRQQGRILCTAWHSSGDYLVTGC-AA---AVRVWDIHKGHA----------------- 188 (708)
Q Consensus 138 wd~~~~--------~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~-~d---~i~iwd~~~~~~----------------- 188 (708)
.+.... ... ....+|. ....++|+|+|.+.++-. .+ .|... ..|..
T Consensus 179 i~~dG~ip~~nPf~~~~--i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i--~~G~nyGwP~~~g~~~~~~~~~ 253 (347)
T 3das_A 179 MTPDGEPAPGNPFPGSP--VYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAI--KPGDNYGWPEAEGKGGGSGFHD 253 (347)
T ss_dssp ECTTSSBCTTCSSTTCC--EEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEE--CTTCBCCTTTCCSSCCCTTCCC
T ss_pred EeCCCCccCCCCCCCCe--EEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEE--cCCCEecCCcccCCCCCccccC
Confidence 444322 110 1122333 346789999887666532 22 23322 22211
Q ss_pred -EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCee----EEEeeccccCeEEEEEeCCCCEEEEE
Q psy12614 189 -IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ----WSDVKTHKKDILALTVSEDENYLYCA 262 (708)
Q Consensus 189 -~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~----~~~~~~~~~~i~~~~~s~~~~~l~~~ 262 (708)
+..+. .+......++|.. |. ++..-..+.|....+..+.. ...+.+....+..++..|||.++++.
T Consensus 254 P~~~~~-------~~~~ap~G~~~~~-g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~t 325 (347)
T 3das_A 254 PVAQWS-------TDEASPSGIAYAE-GSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVT 325 (347)
T ss_dssp CSEEEC-------TTTCCEEEEEEET-TEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEE
T ss_pred CcEecC-------CCCCCCcceEEEc-CceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEE
Confidence 00110 0013456677764 54 55555666777777655432 22334445678899999999766654
Q ss_pred e
Q psy12614 263 G 263 (708)
Q Consensus 263 ~ 263 (708)
+
T Consensus 326 d 326 (347)
T 3das_A 326 S 326 (347)
T ss_dssp C
T ss_pred c
Confidence 4
No 334
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.63 E-value=0.054 Score=51.76 Aligned_cols=196 Identities=8% Similarity=-0.009 Sum_probs=102.4
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEE--cCCCcEEEEECCCCeEeEEEeec--
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSG--GLQGFVNEYDMRRLNIKSSTAVT-- 110 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~--~~d~~i~vwd~~~~~~~~~~~~~-- 110 (708)
.++++++.||.|.-.|..+|+.+= .+.... ..++....-. +..++.+ +.||.|..++..+|.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W-~~~~~~-~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIW-SIEPEN-FQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEE-EECGGG-SCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEE-EecCCc-cCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 468888999999999999988764 333221 0222221111 2244444 68999999999998665544421
Q ss_pred --CCceEE---EEE-----ecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc-----EEEEEEC-----CCCCEE
Q psy12614 111 --SGTCWC---LSV-----HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR-----ILCTAWH-----SSGDYL 170 (708)
Q Consensus 111 --~~~v~~---~~~-----s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-----v~~~~~s-----~d~~~l 170 (708)
..++.. ..+ +..+..+++|+.+|.+...|..+|+.+.........+. ..|.... ..+..|
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 112211 000 01455788899999999999999999865444322111 1111111 123567
Q ss_pred EEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeE-EEEEEccCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy12614 171 VTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAV-WCVAFCADFTIITGDSGGFVRFWDGKTGVQWS 238 (708)
Q Consensus 171 ~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 238 (708)
+.+..+ .+.+.+ ++|+ +..+....-........+ .....+.|+.++.++.||.|.-+|..+|+.+.
T Consensus 169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEE
T ss_pred EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEE
Confidence 776666 777766 4454 222211100000000000 00001123555566777777777777776654
No 335
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.50 E-value=0.68 Score=44.99 Aligned_cols=232 Identities=11% Similarity=-0.038 Sum_probs=120.4
Q ss_pred ccceEEEEEe-CCEEEEEcCCCeEEEEeCCCC-ceeecC---ccCCCCceEEEEcC----CcEEEEEc----C----CeE
Q psy12614 302 EGDVKSLALH-GNRLYSGGLDSYLSLSYYPPK-TLVKYP---CTLAQSTPVSLAKD----IQHVLLQY----T----SHL 364 (708)
Q Consensus 302 ~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~-~~~~~~---~~~~~~~~~~~s~~----~~~l~~~~----~----~~i 364 (708)
-.....+++. ...|+.+..++.|++++.... .+..+. ........++++|+ +.+.++.. + +.|
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 3456788888 445666677799998874432 111111 11234567999997 55555433 2 567
Q ss_pred EEEEecCCCCCCCCCCCCCCcccCCCCceEEEE-EEecCCCceEEEEeCCCCcEEEE-EcCCc-----------eEEEEE
Q psy12614 365 ELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVK-MSAVNNATIRCSVVSNDGKYVAY-STESC-----------VRLHSL 431 (708)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~s~~g~~l~~-~~d~~-----------i~i~~~ 431 (708)
..|+..... .. +. ....+.. +..........++|.|||.++++ ++.+. =+|+.+
T Consensus 108 ~r~~~~~~~---------~~---~~-~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri 174 (354)
T 3a9g_A 108 IRGRLDGST---------FK---LK-EVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRV 174 (354)
T ss_dssp EEEEECSSS---------CC---EE-EEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEE
T ss_pred EEEEECCCC---------cC---cC-ccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEE
Confidence 777765431 00 00 0112222 22111223467899999987666 33211 155665
Q ss_pred EecCC--------cceeEEeecCCcccccceeEEEEEec-CCCeEEEEecCCc---EEEecCCCe---------------
Q psy12614 432 DLDGD--------KPQISRIKNLPAPLFKSIFTHVLISA-DSTLLLAVSLNGP---LYIIDLSSL--------------- 484 (708)
Q Consensus 432 ~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~s~-d~~~l~~~~~dg~---i~~~~~~~~--------------- 484 (708)
..... ...+.. .++. ....++|+| +|.+.++-..... |..+..+.-
T Consensus 175 ~~dG~~p~~npf~~~~i~a----~G~r---np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~ 247 (354)
T 3a9g_A 175 DEEGRPPADNPFPNSPIWS----YGHR---NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEF 247 (354)
T ss_dssp CTTSCCCTTSSSTTCCEEE----ECCS---CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTS
T ss_pred cCCCCCCCCCCCCCCcEEE----EccC---CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCC
Confidence 54221 011111 1121 223389999 5665544322221 544443310
Q ss_pred -EEEEEecCCCCCccCcceEEEEEC-------CCCcEEEEEecCCeEEEEECCce--e---ee-cCCCCCCceEEEEcCC
Q psy12614 485 -EIKYCVDPYKSNLMSDVISLVQMS-------ECKQYIVCADRKSHVVIWKNGQH--H---AS-LPRYRKPSTAMAIHPT 550 (708)
Q Consensus 485 -~~~~~~~~~~~~~~~~~i~~~~~s-------~~~~~l~~~~~d~~i~iw~~~~~--~---~~-~~~~~~~v~~l~~s~d 550 (708)
..+..+. .. ......++|. .+|.++++.-..+.|...+++.. . .. +.+....+..+++.||
T Consensus 248 ~~p~~~~~--~~---~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pD 322 (354)
T 3a9g_A 248 VDPVIDTG--SE---TWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDD 322 (354)
T ss_dssp CCCSEECT--TC---CCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTT
T ss_pred cCCEeecC--CC---CcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCC
Confidence 0111110 01 2356778883 57777777667788888888721 1 22 3333467899999999
Q ss_pred CCEEEEEe
Q psy12614 551 LSTLVTVY 558 (708)
Q Consensus 551 ~~~l~~~~ 558 (708)
|.+.++..
T Consensus 323 G~lyv~~~ 330 (354)
T 3a9g_A 323 GGILISTS 330 (354)
T ss_dssp SCEEEEEC
T ss_pred CcEEEEEe
Confidence 97666553
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.44 E-value=0.057 Score=47.22 Aligned_cols=147 Identities=5% Similarity=-0.105 Sum_probs=84.5
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc--------EEEEEECCCCCEEEEecCCeEEEEEc
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR--------ILCTAWHSSGDYLVTGCAAAVRVWDI 183 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--------v~~~~~s~d~~~l~~~~~d~i~iwd~ 183 (708)
..+..++|+|+|.+.++ .+|.++-.+..+... ....+.... -.++.|.|+|.+.++ +.+.|.-++.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~---~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDN---DNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTT---CCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCc---ccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCC
Confidence 36779999999987766 667665555433211 111111222 378999999987777 3347777775
Q ss_pred CCCceE------EEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCe------eEEEee-ccccCeEEE
Q psy12614 184 HKGHAI------HKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGV------QWSDVK-THKKDILAL 250 (708)
Q Consensus 184 ~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~------~~~~~~-~~~~~i~~~ 250 (708)
.+.... ..+-. ..-..+..+.|.|+|.|.+.. ++.++-....++. ....+- ..-....-+
T Consensus 115 P~~~~~~Wl~~a~~vg~------~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l 187 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGS------GGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFL 187 (236)
T ss_dssp CCSTTCCHHHHSEEEEC------SSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEE
T ss_pred CcCCCCceeccccEecc------CCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEE
Confidence 331110 11110 113567999999999877777 8886544433221 111111 222344557
Q ss_pred EEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 251 TVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 251 ~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.|++++...++. ++ ++|....
T Consensus 188 ~f~~~G~l~~v~--~g--~~Y~~~~ 208 (236)
T 1tl2_A 188 FFSSVGTLFGVQ--GG--KFYEDYP 208 (236)
T ss_dssp EECTTSCEEEEE--TT--EEEEESC
T ss_pred EECCCCcEEEEe--CC--eEEecCC
Confidence 799999777665 66 4444433
No 337
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.41 E-value=0.35 Score=48.86 Aligned_cols=105 Identities=14% Similarity=0.082 Sum_probs=60.9
Q ss_pred CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccc------ccccEEEEEECCC---CCEEEEec-C-----
Q psy12614 111 SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDR------QQGRILCTAWHSS---GDYLVTGC-A----- 175 (708)
Q Consensus 111 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~v~~~~~s~d---~~~l~~~~-~----- 175 (708)
-...+.|+|.|+|+++++-...+.|++++..++.......+.. ..+....|+|+|| +..|+.+. .
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 3467899999999877664333468888766565432223321 2456789999996 55554433 1
Q ss_pred -------C-eEEEEEcCCC--ce--EEEEEe-cccCCCCCceeEEEEEEccCCEEE
Q psy12614 176 -------A-AVRVWDIHKG--HA--IHKMSL-DKSSKFSKNTAVWCVAFCADFTII 218 (708)
Q Consensus 176 -------d-~i~iwd~~~~--~~--~~~~~~-~~~~~~~~~~~v~~~~~~~~~~l~ 218 (708)
. .|.-+++..+ .. ...+.. ... ........++|.|||.|.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~---~~~H~~~~l~f~pDG~Ly 158 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS---SKDHQSGRLVIGPDQKIY 158 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC---CSSCCEEEEEECTTSCEE
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCC---CCCCCCCeEeECCCCeEE
Confidence 3 5666665432 11 111111 100 112347899999999743
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.19 E-value=0.37 Score=47.08 Aligned_cols=229 Identities=10% Similarity=0.033 Sum_probs=108.7
Q ss_pred CCCEEEEEeC-CCcEEEEeCCC--CCeEEEEEecCC-CCCcEEEEEEe-CCEEEEEcC-C---------CcEEEEECCCC
Q psy12614 37 KSSRLAVSRA-DQSIEIWDISE--TPHVDRVFIGDP-LSNSIECLTWF-NDRLFSGGL-Q---------GFVNEYDMRRL 101 (708)
Q Consensus 37 ~~~~la~~~~-dg~v~iwd~~~--~~~~~~~~~~h~-~~~~v~~l~~~-~~~l~s~~~-d---------~~i~vwd~~~~ 101 (708)
++++.+.|+. ...+.+||..+ .+-. .+..-. ....-.+++.. +..++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~--~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWT--ALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEE--ECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCee--ECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 5666666654 35689999874 3322 222111 01222233333 666666665 2 46889998886
Q ss_pred eEeEEEeec-CCceEEEEEecCCCEEEEEeCC---------------------------------------CcEEEEEcc
Q psy12614 102 NIKSSTAVT-SGTCWCLSVHKKKRLLAAGTEQ---------------------------------------GHINLFQIS 141 (708)
Q Consensus 102 ~~~~~~~~~-~~~v~~~~~s~~~~~la~~~~d---------------------------------------~~i~iwd~~ 141 (708)
+-...-... .......+...+++.++.|+.+ ..+.+||..
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 532211111 1111122222567777888754 578999999
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecC------C-eEEEEEc--CCCceEEEEEecccCCCCCceeEEEEEEc
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA------A-AVRVWDI--HKGHAIHKMSLDKSSKFSKNTAVWCVAFC 212 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~------d-~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 212 (708)
+.+......+......-.+++.. +++.++.|+. . .+.++|+ .+.+-. .+..... ........+..
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~-~~~~~~~----~~~~~~~~~~~ 250 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWN-KLAPVSS----PDGVAGGFAGI 250 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEE-ECCCSST----TTCCBSCEEEE
T ss_pred CCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEE-ecCCCCC----CcccccceEEE
Confidence 88776433333111110222222 4556666653 2 5777876 333222 1111100 01111111222
Q ss_pred cCCE-EEEEcCC----------------------CcEEEEeCCCCe--eEEEeeccccCeEEEEEeCCCCEEEEEecCC-
Q psy12614 213 ADFT-IITGDSG----------------------GFVRFWDGKTGV--QWSDVKTHKKDILALTVSEDENYLYCAGVDP- 266 (708)
Q Consensus 213 ~~~~-l~~~~~d----------------------g~i~~wd~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg- 266 (708)
.+++ ++.|+.+ ..+.+||+.+.+ .+..+......-.+ ...+++.++.|+.++
T Consensus 251 ~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~~ 328 (357)
T 2uvk_A 251 SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIGGETAG 328 (357)
T ss_dssp ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEEEECGG
T ss_pred ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEeeeCCC
Confidence 3555 5555532 257789987654 33333322222222 234677788888653
Q ss_pred -----eEEEEEccC
Q psy12614 267 -----TVVCFQRTR 275 (708)
Q Consensus 267 -----~i~iw~~~~ 275 (708)
.+.++++++
T Consensus 329 ~~~~~~v~~l~~~~ 342 (357)
T 2uvk_A 329 GKAVTDSVLITVKD 342 (357)
T ss_dssp GCEEEEEEEEEC-C
T ss_pred CCEeeeEEEEEEcC
Confidence 355567776
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.13 E-value=0.26 Score=48.17 Aligned_cols=233 Identities=10% Similarity=-0.060 Sum_probs=112.1
Q ss_pred CCEEEEEcC-CCcEEEEECCC--Ce--EeEEEeecCCceEEEEEecCCCEEEEEeC-C---------CcEEEEEccCCcE
Q psy12614 81 NDRLFSGGL-QGFVNEYDMRR--LN--IKSSTAVTSGTCWCLSVHKKKRLLAAGTE-Q---------GHINLFQISDEGL 145 (708)
Q Consensus 81 ~~~l~s~~~-d~~i~vwd~~~--~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d---------~~i~iwd~~~~~~ 145 (708)
+..++.|+. ...+.++|..+ .+ .+..+......-.+++. -++++++.|+. + ..+.+||..+.+.
T Consensus 20 ~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 20 DTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 444455553 35688889864 22 11111101111112222 25666677665 2 4689999998877
Q ss_pred EEEEecccccccEEEEEECCCCCEEEEecCC----------------------------------------eEEEEEcCC
Q psy12614 146 LYEKLLDRQQGRILCTAWHSSGDYLVTGCAA----------------------------------------AVRVWDIHK 185 (708)
Q Consensus 146 ~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d----------------------------------------~i~iwd~~~ 185 (708)
.....+......-.+++. .+++.++.|+.+ .+.+||..+
T Consensus 99 ~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 177 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPST 177 (357)
T ss_dssp EECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTT
T ss_pred EECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCC
Confidence 532222211111112222 466677777642 688999887
Q ss_pred CceEEEEEecccCCCCCceeE-EEEEEccCCE-EEEEcC------CCcEEEEeC--CCCeeEE--EeeccccCeEEEEEe
Q psy12614 186 GHAIHKMSLDKSSKFSKNTAV-WCVAFCADFT-IITGDS------GGFVRFWDG--KTGVQWS--DVKTHKKDILALTVS 253 (708)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~-l~~~~~------dg~i~~wd~--~~~~~~~--~~~~~~~~i~~~~~s 253 (708)
.+-...-.... ...- .+++.. +++ ++.|+. ...+..||+ .+.+-.. .+..........+..
T Consensus 178 ~~W~~~~~~p~------~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~ 250 (357)
T 2uvk_A 178 QQWSYAGESPW------YGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGI 250 (357)
T ss_dssp TEEEEEEECSS------CCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEE
T ss_pred CcEEECCCCCC------CCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEE
Confidence 65443322221 1111 122222 555 555543 346777876 4433221 121111111111223
Q ss_pred CCCCEEEEEecC----------------------CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe
Q psy12614 254 EDENYLYCAGVD----------------------PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 254 ~~~~~l~~~~~d----------------------g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
.+++.++.|+.+ ..+.+||+.+ ..|.....+......-.++.+.
T Consensus 251 ~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~--------------~~W~~~~~~p~~r~~~~~~~~~ 316 (357)
T 2uvk_A 251 SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHN--------------GKWDKSGELSQGRAYGVSLPWN 316 (357)
T ss_dssp ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----------------CEEEEECSSCCBSSEEEEET
T ss_pred ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCC--------------CceeeCCCCCCCcccceeEEeC
Confidence 356666666632 2467888877 3576665554433333344444
Q ss_pred CCEEEEEcCCC------eEEEEeCCCCceee
Q psy12614 312 GNRLYSGGLDS------YLSLSYYPPKTLVK 336 (708)
Q Consensus 312 ~~~l~s~~~d~------~i~iw~~~~~~~~~ 336 (708)
+.+++.||.++ .+.++++++++...
T Consensus 317 ~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 317 NSLLIIGGETAGGKAVTDSVLITVKDNKVTV 347 (357)
T ss_dssp TEEEEEEEECGGGCEEEEEEEEEC-CCSCEE
T ss_pred CEEEEEeeeCCCCCEeeeEEEEEEcCcEeEe
Confidence 77888888653 35555777766433
No 340
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.92 E-value=1.2 Score=42.08 Aligned_cols=201 Identities=9% Similarity=0.020 Sum_probs=107.1
Q ss_pred EEEEEeCCEEEEEcCC--------------CeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEc---CCeEEEEE
Q psy12614 306 KSLALHGNRLYSGGLD--------------SYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQY---TSHLELWS 368 (708)
Q Consensus 306 ~~l~~~~~~l~s~~~d--------------~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~---~~~i~i~~ 368 (708)
..+...+++|+-.... ..|+..++++.....+. ......++++++.|+... ++.-.||.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~----~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD----PDPCIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE----CSCEEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee----cCCccEEEEeCCEEEEEeecCCCCceEEE
Confidence 3444447777665442 46777777776543333 223457888999888754 44444554
Q ss_pred ecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCc
Q psy12614 369 LGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPA 448 (708)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~ 448 (708)
+.... . ....+. .+. + .+++++|+.|+..+++.-.|+.+...... .+.+ +.+
T Consensus 134 ~~~dG-----------------s--~~~~lt-~~~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~--~~~l--~~~ 185 (302)
T 3s25_A 134 IRIDG-----------------E--EKKKIK-NHY--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQS--EALF--YDC 185 (302)
T ss_dssp EETTS-----------------C--CCEEEE-SSC--C--CCSEEETTEEEEECTTTCCEEEEETTTTE--EEEE--ECS
T ss_pred EECCC-----------------C--CeEEEe-CCC--c--eEeeEECCEEEEEeCCCceEEEEECCCCC--EEEE--eCC
Confidence 44211 0 111222 111 1 46788999999765454455555543332 2222 122
Q ss_pred ccccceeEEEEEecCCCeEEEEecCC-c-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEec--CCeEE
Q psy12614 449 PLFKSIFTHVLISADSTLLLAVSLNG-P-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADR--KSHVV 524 (708)
Q Consensus 449 ~~~~~~i~~~~~s~d~~~l~~~~~dg-~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--d~~i~ 524 (708)
.. . ..++|++.+|+.....+ . |+..+..... ...+. ...+ ..|+|++++|+.++. .+.|.
T Consensus 186 ~~---~---~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt-------~~~~--~~~~~~g~~Iy~~~~~~~~~i~ 249 (302)
T 3s25_A 186 NC---Y---KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLT-------EANI--EHYNVYGSLIFYQRGGDNPALC 249 (302)
T ss_dssp CE---E---EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECS-------CSCE--EEEEEETTEEEEEECSSSCEEE
T ss_pred Cc---c---ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEe-------CCCc--ceEEECCCEEEEEECCCCcEEE
Confidence 11 1 34679999998876554 3 7777643222 23332 2233 348889999987642 35677
Q ss_pred EEECC-ceeeecCCCCCCceEEEEcCCCCEEEEEe
Q psy12614 525 IWKNG-QHHASLPRYRKPSTAMAIHPTLSTLVTVY 558 (708)
Q Consensus 525 iw~~~-~~~~~~~~~~~~v~~l~~s~d~~~l~~~~ 558 (708)
.-+++ +....+... .+. .+++.+.+|+-..
T Consensus 250 ~~~~DG~~r~~l~~~--~~~--~i~i~~d~Iy~td 280 (302)
T 3s25_A 250 VVKNDGTGFKELAKG--EFC--NINVTSQYVYFTD 280 (302)
T ss_dssp EEETTSCCCEEEEES--CEE--EEEECSSEEEEEE
T ss_pred EEECCCCccEEeeCC--ccc--eEEEeCCEEEEEE
Confidence 77776 333333221 223 3444566666554
No 341
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.71 E-value=0.98 Score=51.38 Aligned_cols=254 Identities=11% Similarity=0.073 Sum_probs=141.5
Q ss_pred CCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE
Q psy12614 320 LDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS 399 (708)
Q Consensus 320 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (708)
....|.|-|+.+..-.. . ..-...+..++|..++++......++++++++.. ++....
T Consensus 46 ~~~~vvIidl~~~~~~~-r-rpi~AdsAIMnP~~~iiALrag~~lQiFnl~~k~--------------------klks~~ 103 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPI-R-RPISADSAIMNPASKVIALKAGKTLQIFNIEMKS--------------------KMKAHT 103 (1630)
T ss_pred CCceEEEEECCCCCCcc-c-ccccchhhccCCCcceEEEecCCeEEEeehHHhh--------------------hhcccc
Confidence 34478888887754111 0 1223456778899999999889999999998865 222221
Q ss_pred ecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccc--cceeEEEEEecCCCeEEEEec---CC
Q psy12614 400 AVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLF--KSIFTHVLISADSTLLLAVSL---NG 474 (708)
Q Consensus 400 ~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~s~d~~~l~~~~~---dg 474 (708)
....|.--.|-.+ +.|+.-++..|+-|++........+ +..|.. ...|..-..+++.++++..+- +|
T Consensus 104 --~~e~VvfWkWis~-~~l~lVT~~aVyHW~~~~~s~P~k~-----fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~ 175 (1630)
T 1xi4_A 104 --MTDDVTFWKWISL-NTVALVTDNAVYHWSMEGESQPVKM-----FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQN 175 (1630)
T ss_pred --cCCCceEEEecCC-CeeEEEcCCeEEEeccCCCCccHHH-----HhcchhcccCeeEEeeeCCCCCeEEEEeeccCCC
Confidence 1234444455433 3566667778999999642221111 333322 445666778889999886553 23
Q ss_pred c------EEEecCCCeEEEEEecCCCCCccCcceEEEEEC---CCCcEEEEEec---CCeEEEEECCce---ee------
Q psy12614 475 P------LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMS---ECKQYIVCADR---KSHVVIWKNGQH---HA------ 533 (708)
Q Consensus 475 ~------i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s---~~~~~l~~~~~---d~~i~iw~~~~~---~~------ 533 (708)
. +|..+.+.. +.+ .|| ...-..+... +....++.+.. .+.++|-++... ..
T Consensus 176 ~v~G~mQLyS~er~~s---Q~i---egh--a~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~ 247 (1630)
T 1xi4_A 176 RVVGAMQLYSVDRKVS---QPI---EGH--AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKA 247 (1630)
T ss_pred cccceeeeeecccccc---hhh---hHh--HhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCcccc
Confidence 2 666654421 222 233 1111111111 11223333321 268888888632 00
Q ss_pred ---ecCC--CCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceE
Q psy12614 534 ---SLPR--YRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLI 608 (708)
Q Consensus 534 ---~~~~--~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~ 608 (708)
.++. -..-+.++..|+.-..+...+.-|.|.+||++++.++- ..+ -...+|.-.+-.....=++
T Consensus 248 ~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~---------~~r--is~~~iF~~~~~~~~~g~~ 316 (1630)
T 1xi4_A 248 VDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY---------MNR--ISGETIFVTAPHEATAGII 316 (1630)
T ss_pred ccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhh---------hcc--ccCCceEEeccCCCCCceE
Confidence 1111 23455678888888889999999999999999998771 111 1233444434333333345
Q ss_pred EEEcCeeEEEEecC
Q psy12614 609 YLMDDSALCVINKN 622 (708)
Q Consensus 609 ~~~~d~~i~~wd~~ 622 (708)
.....|.|.-..++
T Consensus 317 ~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 317 GVNRKGQVLSVCVE 330 (1630)
T ss_pred EEcCCceEEEEEEc
Confidence 55566666555554
No 342
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.54 E-value=0.7 Score=49.76 Aligned_cols=195 Identities=10% Similarity=0.004 Sum_probs=105.7
Q ss_pred CCCCEEEEEeCC----CcEEEEeCCCCCeEEEEEe-------cCCCCCcEEEEEE--eCCEEEEEcCC------CcEEEE
Q psy12614 36 PKSSRLAVSRAD----QSIEIWDISETPHVDRVFI-------GDPLSNSIECLTW--FNDRLFSGGLQ------GFVNEY 96 (708)
Q Consensus 36 ~~~~~la~~~~d----g~v~iwd~~~~~~~~~~~~-------~h~~~~~v~~l~~--~~~~l~s~~~d------~~i~vw 96 (708)
.++.+++.|+.+ ..+.+||..+++.....+. ... ..-.++.+ .+..++.||.+ +.+.+|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R--~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVAR--MCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCC--BSCEEEEETTTTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccc--cceEEEEEccCCEEEEEcCCCCCCCccccEEEE
Confidence 566777777643 4689999988765442211 111 22344455 45555666643 357889
Q ss_pred ECCCCeEeEEEeec-CCceEEEEEecCCCEEEEEeCCC--cEEEEEccCCcEEEEEe---cccccccEEEEEECCC-CCE
Q psy12614 97 DMRRLNIKSSTAVT-SGTCWCLSVHKKKRLLAAGTEQG--HINLFQISDEGLLYEKL---LDRQQGRILCTAWHSS-GDY 169 (708)
Q Consensus 97 d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~la~~~~d~--~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~s~d-~~~ 169 (708)
|..+.+-...-... ...-.+++...+++.++.|+.++ .+.+||..+........ .......-.++.+..+ ++.
T Consensus 474 d~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 474 DMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp ETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred eCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 98886432211111 11112233334788888887654 69999999888753221 1111122233555555 566
Q ss_pred EEEecC--------CeEEEEEcCCCce-----EEEEEe-cccCCCCCceeEEEEEEccCCE-EEEEcC--------CCcE
Q psy12614 170 LVTGCA--------AAVRVWDIHKGHA-----IHKMSL-DKSSKFSKNTAVWCVAFCADFT-IITGDS--------GGFV 226 (708)
Q Consensus 170 l~~~~~--------d~i~iwd~~~~~~-----~~~~~~-~~~~~~~~~~~v~~~~~~~~~~-l~~~~~--------dg~i 226 (708)
++.|+. +.+.+||+.+... ...+.. ... ...-.+++...+++ ++.|+. ...+
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~-----~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v 628 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLF-----QRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSI 628 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGG-----CCBSCEEEEEETTEEEEECCBCSSCCCCTTTSE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCC-----CcccceEEEeCCCEEEEECCccCCCCCCCCCeE
Confidence 667765 1588999988772 223322 111 11111223334365 556653 3569
Q ss_pred EEEeCCCCeeE
Q psy12614 227 RFWDGKTGVQW 237 (708)
Q Consensus 227 ~~wd~~~~~~~ 237 (708)
.+||+.+++-.
T Consensus 629 ~~yd~~t~~W~ 639 (695)
T 2zwa_A 629 ISLDPLSETLT 639 (695)
T ss_dssp EEEETTTTEEE
T ss_pred EEEECCCCeEE
Confidence 99999887644
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.41 E-value=0.024 Score=54.17 Aligned_cols=191 Identities=15% Similarity=0.105 Sum_probs=104.5
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeec-CCceEEEEE--ec-CCCEEEEE-eCCCcEEEEEccCCcEEEEEecccc-
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVT-SGTCWCLSV--HK-KKRLLAAG-TEQGHINLFQISDEGLLYEKLLDRQ- 154 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~--s~-~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~- 154 (708)
++.++.++.||.|.-.|.++|+.+.+++.. ..++....- .+ ++..++.. +.||.|..++..+|...........
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 568899999999999999999999998754 122222110 01 22333333 5799999999988866533332211
Q ss_pred -cccEEE---EEE-----CCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCC-CCCceeEEEEE---E---ccCCEE
Q psy12614 155 -QGRILC---TAW-----HSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSK-FSKNTAVWCVA---F---CADFTI 217 (708)
Q Consensus 155 -~~~v~~---~~~-----s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~v~~~~---~---~~~~~l 217 (708)
..++.. ... +..+..+++++.+ .+...|+.+|+.+..+....... +. .....|.. + ..++.+
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~-~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFG-SQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC---------------------CCEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCccccc-ccccccccccccccccCCCeE
Confidence 111211 000 0145578888888 99999999999999987542100 00 00001111 1 112346
Q ss_pred EEEcCCCcEEEEeCCCCeeEEEe-----eccccC--e-EEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 218 ITGDSGGFVRFWDGKTGVQWSDV-----KTHKKD--I-LALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 218 ~~~~~dg~i~~wd~~~~~~~~~~-----~~~~~~--i-~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+.+..+..+.+.+ ++|+ +..+ ...... + .....+.|+.+ +.++.||.|.-+|..+
T Consensus 169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~ 231 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDF 231 (339)
T ss_dssp EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTT
T ss_pred EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCC
Confidence 6666666666655 3443 1111 110000 0 00001234655 5578899999999888
No 344
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.38 E-value=1.9 Score=40.67 Aligned_cols=207 Identities=7% Similarity=-0.008 Sum_probs=116.3
Q ss_pred cCCCCEEEEEeC--CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCC--------------CcEEEEEC
Q psy12614 35 EPKSSRLAVSRA--DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQ--------------GFVNEYDM 98 (708)
Q Consensus 35 s~~~~~la~~~~--dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d--------------~~i~vwd~ 98 (708)
++++.+|..... ++.|...+.+..... .+.. ..+..+...+++|+-+... ..|+..++
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~--~l~~----~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNIH--KLSN----DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSCE--EEEE----EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCCE--EccC----CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 457778777642 455666665544432 2322 2233333337777765432 46788888
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEe----CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT----EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~ 174 (708)
..++... +.. .. +..|++++++|+... ....|+..++.+.... .+..+.. ..|+++++.|+-.+
T Consensus 96 dg~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~---~lt~~~~----~~~~~~g~~iy~t~ 163 (302)
T 3s25_A 96 NGHGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK---KIKNHYL----FTCNTSDRYFYYNN 163 (302)
T ss_dssp TSCCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE---EEESSCC----CCSEEETTEEEEEC
T ss_pred CCCcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE---EEeCCCc----eEeeEECCEEEEEe
Confidence 7765332 221 11 237888999998776 2445666666655442 2333322 45678899998766
Q ss_pred C-C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC--CcEEEEeCCCCeeEEEeeccccCeEE
Q psy12614 175 A-A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG--GFVRFWDGKTGVQWSDVKTHKKDILA 249 (708)
Q Consensus 175 ~-d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d--g~i~~wd~~~~~~~~~~~~~~~~i~~ 249 (708)
. . .|.+-++..+... .+... .. . ..+.|++. ++-.... ..|..-++.... ...+.. ..+
T Consensus 164 ~g~~~Iy~~~l~g~~~~-~l~~~-------~~--~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~-- 227 (302)
T 3s25_A 164 PKNGQLYRYDTASQSEA-LFYDC-------NC--Y-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANI-- 227 (302)
T ss_dssp TTTCCEEEEETTTTEEE-EEECS-------CE--E-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCE--
T ss_pred CCCceEEEEECCCCCEE-EEeCC-------Cc--c-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCc--
Confidence 5 4 8999998665543 33211 11 1 23557764 4443332 367777765444 333432 233
Q ss_pred EEEeCCCCEEEEEec--CCeEEEEEccC
Q psy12614 250 LTVSEDENYLYCAGV--DPTVVCFQRTR 275 (708)
Q Consensus 250 ~~~s~~~~~l~~~~~--dg~i~iw~~~~ 275 (708)
..++|++++|+.+.. .+.|..-++..
T Consensus 228 ~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 228 EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 347888988886633 35666666664
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.14 E-value=1.7 Score=46.68 Aligned_cols=203 Identities=10% Similarity=0.043 Sum_probs=108.3
Q ss_pred cCCCEEEEEeCC----CcEEEEEccCCcEEEEE-e-----cccccccEEEEEECCCCCEEEEecCC-------eEEEEEc
Q psy12614 121 KKKRLLAAGTEQ----GHINLFQISDEGLLYEK-L-----LDRQQGRILCTAWHSSGDYLVTGCAA-------AVRVWDI 183 (708)
Q Consensus 121 ~~~~~la~~~~d----~~i~iwd~~~~~~~~~~-~-----~~~~~~~v~~~~~s~d~~~l~~~~~d-------~i~iwd~ 183 (708)
.++..++.|+.+ ..+.+||..+++..... . .......-..+.+..+++.++.|+.+ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777643 46889999988876433 2 11111112233332267777777642 4788898
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCC--cEEEEeCCCCeeEEEe-----eccccCeEEEEEeCC
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGG--FVRFWDGKTGVQWSDV-----KTHKKDILALTVSED 255 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg--~i~~wd~~~~~~~~~~-----~~~~~~i~~~~~s~~ 255 (708)
.+.+-...-.... ...-.+++...+++ ++.|+.++ .+.+||..+++-...- ........++.+..+
T Consensus 476 ~t~~W~~~~~~p~------~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~ 549 (695)
T 2zwa_A 476 KTREWSMIKSLSH------TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPV 549 (695)
T ss_dssp TTTEEEECCCCSB------CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETT
T ss_pred CCCcEEECCCCCC------CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCC
Confidence 7754332211110 11112333333665 66666544 7999999877543221 112222334556655
Q ss_pred -CCEEEEEec--C-----CeEEEEEccCCcccccCCCCCCCCcceEEeEEEe-ccccceEEEEEe-CCEEEEEcC-----
Q psy12614 256 -ENYLYCAGV--D-----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-IHEGDVKSLALH-GNRLYSGGL----- 320 (708)
Q Consensus 256 -~~~l~~~~~--d-----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~~l~~~-~~~l~s~~~----- 320 (708)
++.++.|+. + ..+..||+.+ ..-.....|....... ........+.+. +.+++.||.
T Consensus 550 ~~~iyv~GG~~~~~~~~~~~v~~yd~~~--------~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~ 621 (695)
T 2zwa_A 550 SKQGIILGGGFMDQTTVSDKAIIFKYDA--------ENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL 621 (695)
T ss_dssp TTEEEEECCBCTTSSCBCCEEEEEEECT--------TCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC
T ss_pred CCEEEEECCcCCCCCeeeCcEEEEEccC--------CccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC
Confidence 556666765 2 4588999887 3100011255444321 112223444555 667777774
Q ss_pred ---CCeEEEEeCCCCceeec
Q psy12614 321 ---DSYLSLSYYPPKTLVKY 337 (708)
Q Consensus 321 ---d~~i~iw~~~~~~~~~~ 337 (708)
...+.+||+.+......
T Consensus 622 ~~~~~~v~~yd~~t~~W~~~ 641 (695)
T 2zwa_A 622 FDRTNSIISLDPLSETLTSI 641 (695)
T ss_dssp CCTTTSEEEEETTTTEEEEC
T ss_pred CCCCCeEEEEECCCCeEEEe
Confidence 34688999988875543
No 346
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.67 E-value=4.1 Score=40.98 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=24.0
Q ss_pred CCCCceEEEEcCCc--EEEEEcCCeEEEEEec
Q psy12614 341 LAQSTPVSLAKDIQ--HVLLQYTSHLELWSLG 370 (708)
Q Consensus 341 ~~~~~~~~~s~~~~--~l~~~~~~~i~i~~~~ 370 (708)
+..+..+++.|+|. ++++...+.|++++..
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 45667899999985 8888888999988643
No 347
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.51 E-value=2.2 Score=39.66 Aligned_cols=221 Identities=12% Similarity=0.026 Sum_probs=115.9
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEE
Q psy12614 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
.|..++..... .++. . ||.|..|-....-.+. .-... ...|..++......+... ||.|..|-......+..-
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg-~p~~~--~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLT-MPAAT--QSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTS-CCGGG--GSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCC-CCccC--CCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCCC
Confidence 46666665442 2333 4 8889888766532221 10111 246777777744333334 999999976542211111
Q ss_pred eecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC-CcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCC
Q psy12614 108 AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKG 186 (708)
Q Consensus 108 ~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~ 186 (708)
..-...|..++...+ ..++-. +|.|+.|-... +++- ........|..++...+...++ ..+.|..|-....
T Consensus 98 ~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg---~~~~~~~~i~~i~~G~~~~~~l--~~G~v~~wG~n~~ 169 (282)
T 3qhy_B 98 AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT---VPAEAQSGVTALDGGVYTALAV--KNGGVIAWGDNYF 169 (282)
T ss_dssp GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS---CCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTT
T ss_pred cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC---CCccCCCCeEEEEcccCEEEEE--ECCEEEEecCCCC
Confidence 111245777766554 333345 89999997654 2221 1112234577776654332222 3238888876542
Q ss_pred ceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCC
Q psy12614 187 HAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDP 266 (708)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 266 (708)
..+. ... .....|..++...+..++. .+|.|+.|=....-.+..-......|..++..... .++.. ||
T Consensus 170 gqlg-~p~------~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al~--~g 237 (282)
T 3qhy_B 170 GQTT-VPA------EAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLALK--NG 237 (282)
T ss_dssp STTS-CCG------GGGSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEEEE--TT
T ss_pred CCCC-Cce------ecCCCeEEEEecCCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCE-EEEEE--CC
Confidence 2211 111 1134577777665555555 58999999654322211111123456677655443 33333 89
Q ss_pred eEEEEEccC
Q psy12614 267 TVVCFQRTR 275 (708)
Q Consensus 267 ~i~iw~~~~ 275 (708)
.++.|-...
T Consensus 238 ~v~~wG~n~ 246 (282)
T 3qhy_B 238 KVIAWGSSR 246 (282)
T ss_dssp EEEEESTTC
T ss_pred EEEEecCCC
Confidence 999996654
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.41 E-value=10 Score=38.45 Aligned_cols=216 Identities=14% Similarity=0.114 Sum_probs=127.5
Q ss_pred CCCEEEEEe-CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcC-------CCcEE----------
Q psy12614 37 KSSRLAVSR-ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGL-------QGFVN---------- 94 (708)
Q Consensus 37 ~~~~la~~~-~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~-------d~~i~---------- 94 (708)
||+||.+-. .+..|-.-++..-+.-. +++-.. ...+.+++|. -.+++.+++ ||...
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~-Ii~iPn-~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~ 218 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDK-MITVPN-VQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTM 218 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEE-EEECTT-CSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeece-eEeCCC-CcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceE
Confidence 789998876 46778888988876655 333222 3789999887 556766653 33321
Q ss_pred --EEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCC---------------cEEEEEcc-------CCcEEE---
Q psy12614 95 --EYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG---------------HINLFQIS-------DEGLLY--- 147 (708)
Q Consensus 95 --vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~---------------~i~iwd~~-------~~~~~~--- 147 (708)
..|.++.+....+.. .+....+...++|.+.++.+.+. .+.++++. .|+...
T Consensus 219 f~~iD~~tm~v~~Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g 297 (638)
T 3sbq_A 219 YNAIDAETMEMAFQVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGD 297 (638)
T ss_dssp EEEEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTT
T ss_pred EEEEcCCccEEEEEEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECC
Confidence 123333333222221 23344456677788877766432 25666653 111100
Q ss_pred --EEeccc---------------ccccEEEEEECCCCCEEEEecCC--eEEEEEcCCC------ce-------EEEEEec
Q psy12614 148 --EKLLDR---------------QQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKG------HA-------IHKMSLD 195 (708)
Q Consensus 148 --~~~~~~---------------~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~------~~-------~~~~~~~ 195 (708)
...+.+ -......+.++|||++++.++.- ++.++|++.. +. ......
T Consensus 298 ~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~- 376 (638)
T 3sbq_A 298 SKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL- 376 (638)
T ss_dssp CCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-
T ss_pred CCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-
Confidence 011111 11233457789999999988765 9999998742 11 222221
Q ss_pred ccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCC----------eeEEEeeccccCeEEEEE------eCCCCE
Q psy12614 196 KSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG----------VQWSDVKTHKKDILALTV------SEDENY 258 (708)
Q Consensus 196 ~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~----------~~~~~~~~~~~~i~~~~~------s~~~~~ 258 (708)
.......+|.++|. +.+.--|.+|.-|++... ..+..+.-|-.+- -+.. .+||++
T Consensus 377 -------GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpG-H~~~~~get~~~dGk~ 448 (638)
T 3sbq_A 377 -------GLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPG-HLHASLCETNEADGKW 448 (638)
T ss_dssp -------CSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEE-EEEETTTTSTTCCSCE
T ss_pred -------CCcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCc-ccccCCCccCCCCccE
Confidence 34567889999997 556678999999998653 3455555443322 2222 578999
Q ss_pred EEEEec
Q psy12614 259 LYCAGV 264 (708)
Q Consensus 259 l~~~~~ 264 (708)
|++...
T Consensus 449 lv~lnK 454 (638)
T 3sbq_A 449 LVALSK 454 (638)
T ss_dssp EEEEES
T ss_pred EEEecc
Confidence 998753
No 349
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=92.33 E-value=14 Score=39.62 Aligned_cols=234 Identities=10% Similarity=0.052 Sum_probs=123.2
Q ss_pred EEEEE-EcCCCCEEEEE-eCC----CcEEEEeCCCCCeEEEEEecCCCCC------cEEEEEEe-CCEEEEEc-------
Q psy12614 29 INCIA-CEPKSSRLAVS-RAD----QSIEIWDISETPHVDRVFIGDPLSN------SIECLTWF-NDRLFSGG------- 88 (708)
Q Consensus 29 v~~~~-~s~~~~~la~~-~~d----g~v~iwd~~~~~~~~~~~~~h~~~~------~v~~l~~~-~~~l~s~~------- 88 (708)
...+. ++|++++++.+ +.. ..|+++|+.+++.+.-.+. ..... ....++|. ++.++.+.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCB
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCc
Confidence 44555 89999998875 222 3599999999876532222 11001 11344777 55555442
Q ss_pred ----CCCcEEEEECCCCe--EeEEEeecCCce-EEEEEecCCCE-----EEEEeC---CCcEEEEEccC--CcEEEEEec
Q psy12614 89 ----LQGFVNEYDMRRLN--IKSSTAVTSGTC-WCLSVHKKKRL-----LAAGTE---QGHINLFQISD--EGLLYEKLL 151 (708)
Q Consensus 89 ----~d~~i~vwd~~~~~--~~~~~~~~~~~v-~~~~~s~~~~~-----la~~~~---d~~i~iwd~~~--~~~~~~~~~ 151 (708)
...+|+.|.+-+.. -...+.+....+ .....++++++ +++.+. ...+.+.+... ++.. ...
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~l~ 287 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQ--KIN 287 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEE--ECC
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcce--Eee
Confidence 23568888877643 223344333332 33555667663 343332 24566666653 4432 222
Q ss_pred ccccccEEEEEECCCCCEEEEec----------CC-eEEEEEcCCCc-------eEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 152 DRQQGRILCTAWHSSGDYLVTGC----------AA-AVRVWDIHKGH-------AIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 152 ~~~~~~v~~~~~s~d~~~l~~~~----------~d-~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
...... +..+.++.+++... .. .|...++.++. ....+..+ .....+..+.+..
T Consensus 288 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~ 359 (711)
T 4hvt_A 288 MPSDAT---LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTP-----TANEVFNFISTTK 359 (711)
T ss_dssp SCTTCE---EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECC-----CTTEEEEEEEECS
T ss_pred cCCcce---EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECC-----CCCCeEEEEEEEC
Confidence 222222 23344565555321 34 68888887642 23332222 2367788999998
Q ss_pred CCEEEEEcCCC--cEEEEeCCCCe-eEEE-eecc-ccCeEEEEEeCCCCEEE-EEec---CCeEEEEEc
Q psy12614 214 DFTIITGDSGG--FVRFWDGKTGV-QWSD-VKTH-KKDILALTVSEDENYLY-CAGV---DPTVVCFQR 273 (708)
Q Consensus 214 ~~~l~~~~~dg--~i~~wd~~~~~-~~~~-~~~~-~~~i~~~~~s~~~~~l~-~~~~---dg~i~iw~~ 273 (708)
+..+++...++ .|.++++.+++ .... +... .+.+.....++++..++ +.+. -+.+..+|+
T Consensus 360 ~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~ 428 (711)
T 4hvt_A 360 DRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVK 428 (711)
T ss_dssp SCEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred CEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeC
Confidence 86666666666 46778876664 2222 2211 24566666667665444 3332 245555554
No 350
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.17 E-value=11 Score=37.97 Aligned_cols=61 Identities=15% Similarity=0.206 Sum_probs=41.8
Q ss_pred ceeEEEEEEccCCEEEEEcCCC-cEEEEeCCCCeeE--EEeec------cccCeEEEEEeCC---CCEEEEEe
Q psy12614 203 NTAVWCVAFCADFTIITGDSGG-FVRFWDGKTGVQW--SDVKT------HKKDILALTVSED---ENYLYCAG 263 (708)
Q Consensus 203 ~~~v~~~~~~~~~~l~~~~~dg-~i~~wd~~~~~~~--~~~~~------~~~~i~~~~~s~~---~~~l~~~~ 263 (708)
-...+.++|.|+|+++++...+ .|++++..+++.. ..+.. .......|+|+|+ +.+|+.+.
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 3456799999999977777775 6999986655432 22221 2456779999996 55666554
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=91.40 E-value=3.9 Score=37.98 Aligned_cols=223 Identities=11% Similarity=-0.010 Sum_probs=114.4
Q ss_pred CcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec
Q psy12614 72 NSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL 151 (708)
Q Consensus 72 ~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~ 151 (708)
..|..++......+... ||.|..|-......+..-......|..++...+- .++. . ||.|+.|-....... -..
T Consensus 24 ~~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gql--g~P 97 (282)
T 3qhy_B 24 SGVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQT--TVP 97 (282)
T ss_dssp SSCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTT--CCC
T ss_pred CCCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCC--CCC
Confidence 45777777644444445 9999999765432211111112356666665432 2333 4 899998876532211 111
Q ss_pred ccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeC
Q psy12614 152 DRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDG 231 (708)
Q Consensus 152 ~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~ 231 (708)
..-...|..++...+...++ ..+.|..|-....-.+.. .. .....|..++...+..++.. +|.|+.|-.
T Consensus 98 ~~~~~~v~~ia~G~~hs~al--~~G~v~~wG~n~~gqlg~-~~------~~~~~i~~i~~G~~~~~~l~--~G~v~~wG~ 166 (282)
T 3qhy_B 98 AEARSGVDAIAAGAWASYAL--KDGKVIAWGDDSDGQTTV-PA------EAQSGVTALDGGVYTALAVK--NGGVIAWGD 166 (282)
T ss_dssp GGGSSSEEEEEEETTEEEEE--ETTEEEEEECCTTSTTSC-CG------GGGSSEEEEEECSSEEEEEE--TTEEEEEEC
T ss_pred cccCCCeEEEECcCCEEEEE--eCCeEEEecCCCCCcCCC-Cc------cCCCCeEEEEcccCEEEEEE--CCEEEEecC
Confidence 11134677777654433333 323899997654222110 11 11345667766544444433 688998865
Q ss_pred CCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe
Q psy12614 232 KTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 232 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
.....+..-......|..++.-.+. .++. .||.++.|-.....++ +. + ......|..++..
T Consensus 167 n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gql----g~----p--------~~~~~~v~~i~~G 227 (282)
T 3qhy_B 167 NYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQT----TV----P--------TEALSGVSAIASG 227 (282)
T ss_dssp CTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTT----CC----C--------GGGGSSCCEEEEC
T ss_pred CCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCC----CC----C--------cccCCCceEEEcC
Confidence 4322211111123567777665443 3333 5899999976651111 00 0 0112356677666
Q ss_pred CCEEEEEcCCCeEEEEeCCC
Q psy12614 312 GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 312 ~~~l~s~~~d~~i~iw~~~~ 331 (708)
....+.-. |+.+..|-...
T Consensus 228 ~~h~~al~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 228 EWYSLALK-NGKVIAWGSSR 246 (282)
T ss_dssp SSCEEEEE-TTEEEEESTTC
T ss_pred CCEEEEEE-CCEEEEecCCC
Confidence 33333333 88888886654
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=88.68 E-value=19 Score=35.24 Aligned_cols=218 Identities=10% Similarity=0.010 Sum_probs=104.7
Q ss_pred CEEEEEeCCCcEEEEeCCC-C-CeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCC----cEEEEECCCCeEeEEEee
Q psy12614 39 SRLAVSRADQSIEIWDISE-T-PHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQG----FVNEYDMRRLNIKSSTAV 109 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~-~-~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~----~i~vwd~~~~~~~~~~~~ 109 (708)
..|.+|+..| +.+++... + .... .-.... ...|.+|++. .+.|.+++..| .|...+ ..++.-..+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~-~~~~~~-~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~ 98 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWEL-RGPVFL-GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATR 98 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEE-EEEEST-TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSB
T ss_pred CEEEEEecCc-eEEEECCCCCCCceE-CCccCC-CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCc
Confidence 4677787777 55665443 2 2221 111122 3679999997 55666666555 444332 23322111110
Q ss_pred --------------cCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEEEEecc----------------ccccc
Q psy12614 110 --------------TSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLYEKLLD----------------RQQGR 157 (708)
Q Consensus 110 --------------~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~----------------~~~~~ 157 (708)
....|.++++.|. ...|.+++..+.|...+-..........+. .....
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 1135888999872 455666666665544432222222111110 11235
Q ss_pred EEEEEECCC-CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCC-C-----CceeEEEEEEccC--CEEEEEcCCCcEE
Q psy12614 158 ILCTAWHSS-GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKF-S-----KNTAVWCVAFCAD--FTIITGDSGGFVR 227 (708)
Q Consensus 158 v~~~~~s~d-~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~-~-----~~~~v~~~~~~~~--~~l~~~~~dg~i~ 227 (708)
+.+|.+.|. ...|..+..+ .|...+ ..|+....+.......+ . ....+.++++.|+ +.+.++...+ |.
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~ 256 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IY 256 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EE
Confidence 789999884 3445545444 444332 23443333321100000 0 0134889999986 5666666544 55
Q ss_pred EEeCCCCeeEEEeec--cc---cCeEEEEEeCC-CCEEEEEe
Q psy12614 228 FWDGKTGVQWSDVKT--HK---KDILALTVSED-ENYLYCAG 263 (708)
Q Consensus 228 ~wd~~~~~~~~~~~~--~~---~~i~~~~~s~~-~~~l~~~~ 263 (708)
..+ ..++....+.. .. ..+.+++++|. ...|+++.
T Consensus 257 ~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 257 RMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp EEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred EeC-CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEe
Confidence 444 23443333321 11 34567888763 34455543
No 353
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.11 E-value=28 Score=35.43 Aligned_cols=230 Identities=13% Similarity=0.123 Sum_probs=133.3
Q ss_pred EEEEeCCCcEEEEeCCCCCeEEEEEecCC-----------------------CCCcEE--EEEEe-----CCEEEEEc-C
Q psy12614 41 LAVSRADQSIEIWDISETPHVDRVFIGDP-----------------------LSNSIE--CLTWF-----NDRLFSGG-L 89 (708)
Q Consensus 41 la~~~~dg~v~iwd~~~~~~~~~~~~~h~-----------------------~~~~v~--~l~~~-----~~~l~s~~-~ 89 (708)
+.+|+.+|.|+|+-+.+++.+. .+.-.. ..+... .+++. |++|+.-. .
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~-~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELM-RIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEE-EECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EeecCcCceEEEEecCCcceEE-EeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 5678889999999999988775 333110 012222 33333 67887776 5
Q ss_pred CCcEEEEECCCCeEeEEEe-ecCCceEEEEEe--cCCCEEEEEeC-------CCcE---------EE---EEccCCcEEE
Q psy12614 90 QGFVNEYDMRRLNIKSSTA-VTSGTCWCLSVH--KKKRLLAAGTE-------QGHI---------NL---FQISDEGLLY 147 (708)
Q Consensus 90 d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~s--~~~~~la~~~~-------d~~i---------~i---wd~~~~~~~~ 147 (708)
+..|..-++...++...+. .....+..++|- |+..|++.+++ ||.. .+ .|.++.++.+
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~ 231 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF 231 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence 6779999999998877776 445678888886 78888888765 3321 11 2223333332
Q ss_pred EEecccccccEEEEEECCCCCEEEEecCC----------------eEEEEEcC-------CCce-------EEEEEeccc
Q psy12614 148 EKLLDRQQGRILCTAWHSSGDYLVTGCAA----------------AVRVWDIH-------KGHA-------IHKMSLDKS 197 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d----------------~i~iwd~~-------~~~~-------~~~~~~~~~ 197 (708)
+.... +....+...++|.+.++.+.+ .+.++|+. .|+. +..+.....
T Consensus 232 Qv~v~---gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~ 308 (638)
T 3sbq_A 232 QVIVD---GNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKK 308 (638)
T ss_dssp EEEES---SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCB
T ss_pred EEEcC---CChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccccc
Confidence 22222 122234446667776665543 25666653 1110 111111000
Q ss_pred ---CC-C----CCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCC------ee-------EEEeeccccCeEEEEEeC
Q psy12614 198 ---SK-F----SKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTG------VQ-------WSDVKTHKKDILALTVSE 254 (708)
Q Consensus 198 ---~~-~----~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~------~~-------~~~~~~~~~~i~~~~~s~ 254 (708)
.. + ........+..+|||+ +++|-.+.++.++|.+.- +. ..... -.-.....+|.+
T Consensus 309 ~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~ 387 (638)
T 3sbq_A 309 DGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG 387 (638)
T ss_dssp TTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS
T ss_pred cccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC
Confidence 00 0 0012233678899996 455666889999998731 11 22222 344567889999
Q ss_pred CCCEEEEEecCCeEEEEEccC
Q psy12614 255 DENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 255 ~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+|+-..+---|..|.-|++..
T Consensus 388 ~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 388 RGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SSEEEEEETTTTEEEEEEHHH
T ss_pred CCceEeeeeecceEEEEeccH
Confidence 994444555799999999976
No 354
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=81.52 E-value=36 Score=32.14 Aligned_cols=164 Identities=13% Similarity=0.149 Sum_probs=96.0
Q ss_pred eEEEEEecCCCeEEEEecCCcEEEecCC---------CeEEEEEecCCCCCccCcceEEE-EECC--CCcEEEEEecCCe
Q psy12614 455 FTHVLISADSTLLLAVSLNGPLYIIDLS---------SLEIKYCVDPYKSNLMSDVISLV-QMSE--CKQYIVCADRKSH 522 (708)
Q Consensus 455 i~~~~~s~d~~~l~~~~~dg~i~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~-~~s~--~~~~l~~~~~d~~ 522 (708)
+..+........|+..+..|.+|.+... .+..+..+-.... ...|..+ .+.. +..++++++.+|.
T Consensus 44 ~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~---~e~i~~~~~~~~~~~e~~~v~~T~~G~ 120 (327)
T 3uc1_A 44 VAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQP---EERIAQVIQIRGYTDAPYLVLATRNGL 120 (327)
T ss_dssp EEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCT---TCCEEEEEEESSTTSSSEEEEEETTSE
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCC---CCEEEEEEEeccCCCCCEEEEEcCCCE
Confidence 3334445566667777788885555321 1222222222222 3345544 4443 5789999999999
Q ss_pred EEEEECCce-------ee--ecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCC
Q psy12614 523 VVIWKNGQH-------HA--SLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQL 593 (708)
Q Consensus 523 i~iw~~~~~-------~~--~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (708)
|+--.+... .. .+.. ...+..+........|+..+..|.+..+.....+.....+.........+ ...+
T Consensus 121 iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L-~~~d 198 (327)
T 3uc1_A 121 VKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRF-NIDD 198 (327)
T ss_dssp EEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCC-CTTC
T ss_pred EEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecC-CCCC
Confidence 999988721 21 3333 34555555555667788899999999888872122111111000000112 2355
Q ss_pred CeeEEEeCCCCCceEEEEcCeeEEEEecCC
Q psy12614 594 PVLGIEFDPQDSSLIYLMDDSALCVINKNK 623 (708)
Q Consensus 594 ~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~ 623 (708)
.|.++...+++.+|++++..|.++.-.++.
T Consensus 199 ~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 199 RLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp CEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 788877777777899999999998887753
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=67.65 E-value=91 Score=30.10 Aligned_cols=166 Identities=8% Similarity=0.075 Sum_probs=92.7
Q ss_pred cEEEEECCCC--eEeEEEeec------CCceEEEEEe---cC----CCEEEEEe-CCCcEEEEEccCCcEEEEEe--c--
Q psy12614 92 FVNEYDMRRL--NIKSSTAVT------SGTCWCLSVH---KK----KRLLAAGT-EQGHINLFQISDEGLLYEKL--L-- 151 (708)
Q Consensus 92 ~i~vwd~~~~--~~~~~~~~~------~~~v~~~~~s---~~----~~~la~~~-~d~~i~iwd~~~~~~~~~~~--~-- 151 (708)
.|.+||+.+. +.++.+.-. ...+..+++. |+ +.+...+. ....|.++|+.+++.-.... +
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5889999999 888887632 3457888888 22 23333333 36779999999887542110 0
Q ss_pred --------ccc----cccEEEEEECCC----CCEEEEecCCeEEEEEcC-----CCc---eEEEEEecccCCCCCceeEE
Q psy12614 152 --------DRQ----QGRILCTAWHSS----GDYLVTGCAAAVRVWDIH-----KGH---AIHKMSLDKSSKFSKNTAVW 207 (708)
Q Consensus 152 --------~~~----~~~v~~~~~s~d----~~~l~~~~~d~i~iwd~~-----~~~---~~~~~~~~~~~~~~~~~~v~ 207 (708)
.+. ...+..|+.+|+ ++.|+...-..-++|.+. +.. .+..+-.. +....-.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~k-----g~~s~~~ 278 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNR-----GKYNDAI 278 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEEC-----CTTCCEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeec-----CCCCCcc
Confidence 011 136888999998 677776554433333332 221 12222110 1023344
Q ss_pred EEEEc-cCCE-EEEEcCCCcEEEEeCCC-C---eeEEEee--ccccCeEEEEEeCCCCEEEEE
Q psy12614 208 CVAFC-ADFT-IITGDSGGFVRFWDGKT-G---VQWSDVK--THKKDILALTVSEDENYLYCA 262 (708)
Q Consensus 208 ~~~~~-~~~~-l~~~~~dg~i~~wd~~~-~---~~~~~~~--~~~~~i~~~~~s~~~~~l~~~ 262 (708)
.+++. .+|. +++--....|..|+..+ . .....+. ..-.....+.+.++|.+.+..
T Consensus 279 ~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 279 ALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp EEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred eEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 56675 5776 55556678899999865 1 1122221 122345667776666544444
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=65.71 E-value=20 Score=37.12 Aligned_cols=57 Identities=11% Similarity=0.063 Sum_probs=40.0
Q ss_pred EEEEecCCCeEEEEecC----------Cc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEE
Q psy12614 457 HVLISADSTLLLAVSLN----------GP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCA 517 (708)
Q Consensus 457 ~~~~s~d~~~l~~~~~d----------g~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 517 (708)
.|+|+|+|.+++.-..+ +. +|.....+.+..+.+..+. ..+++.++|+||++.|++.
T Consensus 480 NL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~----gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI----GCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCT----TCEEEEEEECTTSSEEEEE
T ss_pred ceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCC----CccCcCeeECCCCCEEEEE
Confidence 38999999977654432 12 6766655545555555544 4599999999999988876
No 357
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=65.43 E-value=1e+02 Score=29.79 Aligned_cols=147 Identities=14% Similarity=0.075 Sum_probs=87.6
Q ss_pred eEEEEEcCCC--ceEEEEEecccCCCCCceeEEEEEEc---cC----C-E-EEEEcCCCcEEEEeCCCCeeEEEee----
Q psy12614 177 AVRVWDIHKG--HAIHKMSLDKSSKFSKNTAVWCVAFC---AD----F-T-IITGDSGGFVRFWDGKTGVQWSDVK---- 241 (708)
Q Consensus 177 ~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~---~~----~-~-l~~~~~dg~i~~wd~~~~~~~~~~~---- 241 (708)
.|.+||+.++ +.++++..+.... .....+..+.+. |+ + . .++=...+.|.++|+.+++..+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~-~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLV-EKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGC-CCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhc-ccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 7889999999 9999998764322 224567888877 22 2 3 4444457789999999987665542
Q ss_pred ----------cc----ccCeEEEEEeCC----CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc
Q psy12614 242 ----------TH----KKDILALTVSED----ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG 303 (708)
Q Consensus 242 ----------~~----~~~i~~~~~s~~----~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 303 (708)
+. ...+..++++|+ ++.|+-....+ -++|.+.+. . +.... ......... -++...
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~--~-L~~~~--~~~~v~~~G-~kg~~s 275 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTK--E-LKQKG--GKLNPELLG-NRGKYN 275 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHH--H-HSSTT--CCCCCEEEE-ECCTTC
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHH--H-hhCcc--hhhceEEee-ecCCCC
Confidence 00 247788999998 77887766554 244444330 0 00010 001111111 111112
Q ss_pred ceEEEEEe---CCEEEEEcCCCeEEEEeCCC
Q psy12614 304 DVKSLALH---GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 304 ~v~~l~~~---~~~l~s~~~d~~i~iw~~~~ 331 (708)
.-..+++. |.++++--....|..|+..+
T Consensus 276 ~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 276 DAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp CEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred CcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 33445553 66677777888999999876
No 358
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=64.53 E-value=1e+02 Score=29.62 Aligned_cols=158 Identities=11% Similarity=0.084 Sum_probs=87.1
Q ss_pred EEEecCCCeEEEEecCCcEEEecCC---------CeEEEEEecCCCCCccCcceEEEE-EC--CCCcEEEEEecCCeEEE
Q psy12614 458 VLISADSTLLLAVSLNGPLYIIDLS---------SLEIKYCVDPYKSNLMSDVISLVQ-MS--ECKQYIVCADRKSHVVI 525 (708)
Q Consensus 458 ~~~s~d~~~l~~~~~dg~i~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~~-~s--~~~~~l~~~~~d~~i~i 525 (708)
+........|+..+..|.+|.+... .+..+..+-.... ...|..+. +. .++.+|+.++..|.++.
T Consensus 51 ~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~~---~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKr 127 (370)
T 3l6v_A 51 LWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNARGRPIINWIPLES---GERVQAVLPVREYADNRYVFMATRNGTVKK 127 (370)
T ss_dssp EEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCCT---TCCEEEEEEESCCCTTCEEEEEETTSEEEE
T ss_pred EEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcccCCcCHhhccCCCC---CCEEEEEEEeccCCCCcEEEEEeCCCeEEE
Confidence 4445555667777788885554321 1122211111111 33455444 33 24568999999999999
Q ss_pred EECCce-------ee--ecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCee
Q psy12614 526 WKNGQH-------HA--SLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVL 596 (708)
Q Consensus 526 w~~~~~-------~~--~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 596 (708)
-.+... .. .+.. ...+..+....+...|+..+.+|.+.-++...-... .+.........+ ...+.|.
T Consensus 128 t~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~--gR~a~GV~~i~L-~~~d~Vv 203 (370)
T 3l6v_A 128 TPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSM--GRTATGVRGIRL-AKGEEVV 203 (370)
T ss_dssp EEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEEGGGSCBC--CTTCCCEECCCC-CTTCCEE
T ss_pred eEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEEccccCcc--CCCCCCeeeEEe-CCCCEEE
Confidence 987721 11 2332 345555555555667888899999888887643322 110000000011 2234566
Q ss_pred EEEeCC-----------------------------------CCCceEEEEcCeeEEEEecC
Q psy12614 597 GIEFDP-----------------------------------QDSSLIYLMDDSALCVINKN 622 (708)
Q Consensus 597 ~l~~s~-----------------------------------~~~~l~~~~~d~~i~~wd~~ 622 (708)
++...+ ++..|++.+..|..+...++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~ 264 (370)
T 3l6v_A 204 SLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLA 264 (370)
T ss_dssp EEEEECCC-----------------------------------CEEEEEETTSEEEEEEGG
T ss_pred EEEEeccccccccccccccccccccccccccccccccccccCCceEEEeeCCCCEEEEEHH
Confidence 655444 45678888899988888775
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=62.21 E-value=69 Score=35.75 Aligned_cols=40 Identities=18% Similarity=0.304 Sum_probs=34.6
Q ss_pred ccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEec
Q psy12614 156 GRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLD 195 (708)
Q Consensus 156 ~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~ 195 (708)
..+.+++..++..++++.+.| ++++|++.+++++......
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~ 276 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 276 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeeccc
Confidence 357788888899999999999 9999999999998887653
No 360
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=58.88 E-value=1.2e+02 Score=28.33 Aligned_cols=158 Identities=9% Similarity=0.045 Sum_probs=89.8
Q ss_pred EEEecCCCeEEEEecCCcEEEecCC---------CeEEEEEecCCCCCccCcceEEEEE-C--CCCcEEEEEecCCeEEE
Q psy12614 458 VLISADSTLLLAVSLNGPLYIIDLS---------SLEIKYCVDPYKSNLMSDVISLVQM-S--ECKQYIVCADRKSHVVI 525 (708)
Q Consensus 458 ~~~s~d~~~l~~~~~dg~i~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~~~-s--~~~~~l~~~~~d~~i~i 525 (708)
+........|+..+..|.+|.+... .+..+..+-.... ...|..+.. . .++.+++..+..|.++-
T Consensus 47 ~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l~l~~---~e~i~~~~~~~~~~~~~~ll~~T~~G~~Kr 123 (307)
T 1zi0_A 47 LLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQ---DERITAILPVTEFEEGVKVFMATANGTVKK 123 (307)
T ss_dssp EEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTSCCCT---TCCEEEEEEESCCCTTCEEEEEETTSEEEE
T ss_pred EEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhccCCCC---CCEEEEEEEeccCCCCcEEEEEeCCCeEEE
Confidence 3444455666667777775544321 1122111111111 335555543 2 35678889999999999
Q ss_pred EECCc-------eee--ecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCee
Q psy12614 526 WKNGQ-------HHA--SLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVL 596 (708)
Q Consensus 526 w~~~~-------~~~--~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 596 (708)
-.+.. ... .+..+ ..+..+....+...|+..+.+|.+..++...-... .+.........+ ...+.|.
T Consensus 124 t~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~--gr~a~Gv~~i~L-~~~d~Vv 199 (307)
T 1zi0_A 124 TVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAM--GCNTTGVRGIRL-GEGDKVV 199 (307)
T ss_dssp EEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBC--CTTCCCEECCCC-CTTCCEE
T ss_pred EEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCcc--CCCCCCeEeEEe-CCCCEEE
Confidence 98861 112 33334 45555555555667888999999888887643222 110000000112 2345677
Q ss_pred EEEeCCCCCceEEEEcCeeEEEEecC
Q psy12614 597 GIEFDPQDSSLIYLMDDSALCVINKN 622 (708)
Q Consensus 597 ~l~~s~~~~~l~~~~~d~~i~~wd~~ 622 (708)
++...+++..|++.+..|.++-.+++
T Consensus 200 ~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 200 SLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp EEECCCSSCEEEEEETTSEEEEECGG
T ss_pred EEEEecCCCEEEEEEcCCceEEEEHH
Confidence 77666666778899999998888764
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=58.30 E-value=80 Score=35.20 Aligned_cols=39 Identities=10% Similarity=0.037 Sum_probs=33.2
Q ss_pred ceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec
Q psy12614 113 TCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL 151 (708)
Q Consensus 113 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~ 151 (708)
.+.+++..++..++++-+.|+++|+|++.+++++....+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 567888888999999999999999999999998754433
No 362
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=57.94 E-value=35 Score=34.91 Aligned_cols=60 Identities=13% Similarity=0.043 Sum_probs=43.5
Q ss_pred eeEEEEEEccCCEEEE-EcC------------CCcEEEEeCCCCeeEEEeecc-ccCeEEEEEeCCCCEEEEEe
Q psy12614 204 TAVWCVAFCADFTIIT-GDS------------GGFVRFWDGKTGVQWSDVKTH-KKDILALTVSEDENYLYCAG 263 (708)
Q Consensus 204 ~~v~~~~~~~~~~l~~-~~~------------dg~i~~wd~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~ 263 (708)
.....|+|.++|.|.. .+. ...+..++..+++....+.+. ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 5567899999997555 322 126777887778776665543 35789999999999988764
No 363
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=54.76 E-value=1.6e+02 Score=28.53 Aligned_cols=97 Identities=9% Similarity=0.042 Sum_probs=50.1
Q ss_pred EEEEecCCeEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEcc--CCEEEEEcCCC----cEEEEeCCCCeeEEEee
Q psy12614 169 YLVTGCAAAVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCA--DFTIITGDSGG----FVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 169 ~l~~~~~d~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~~~~~dg----~i~~wd~~~~~~~~~~~ 241 (708)
.|..++...+.+++... +......... .....|.++++.| ++.+.+++..| .|...+ ..++....+.
T Consensus 24 ~l~vgt~~Gl~~~~~~~~g~~W~~~~~~-----~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~ 97 (394)
T 3b7f_A 24 MLLVATIKGAWFLASDPARRTWELRGPV-----FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEAT 97 (394)
T ss_dssp EEEEEETTEEEEEEECTTSCSEEEEEEE-----STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECS
T ss_pred EEEEEecCceEEEECCCCCCCceECCcc-----CCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECC
Confidence 56666655555555432 3333322111 1156799999998 55666666555 454443 2333222221
Q ss_pred c--------------cccCeEEEEEeCC--CCEEEEEecCCeEEEE
Q psy12614 242 T--------------HKKDILALTVSED--ENYLYCAGVDPTVVCF 271 (708)
Q Consensus 242 ~--------------~~~~i~~~~~s~~--~~~l~~~~~dg~i~iw 271 (708)
. ....|.++++.|. ...|++++..+.|...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 98 RPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp BCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred ccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 1 1124778888862 4566666666655544
No 364
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=53.39 E-value=52 Score=33.71 Aligned_cols=61 Identities=10% Similarity=0.012 Sum_probs=39.6
Q ss_pred eeEEEEEecCCCeEEEEecC----------C--cEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe
Q psy12614 454 IFTHVLISADSTLLLAVSLN----------G--PLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD 518 (708)
Q Consensus 454 ~i~~~~~s~d~~~l~~~~~d----------g--~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 518 (708)
....|.|.++|.+.+..... + .+|.++..+.+....+..+. ..+++.++||||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~----~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI----GCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT----TCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC----CccccCCEECCCCCEEEEEE
Confidence 33448999999877743321 1 27777664445444443322 34789999999999888774
No 365
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=50.04 E-value=1.6e+02 Score=27.38 Aligned_cols=231 Identities=9% Similarity=0.050 Sum_probs=121.1
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCCeEE------EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECC---CC---
Q psy12614 36 PKSSRLAVSRADQSIEIWDISETPHVD------RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMR---RL--- 101 (708)
Q Consensus 36 ~~~~~la~~~~dg~v~iwd~~~~~~~~------~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~---~~--- 101 (708)
|+..++++.+.+|.|+--.+..-.... ..+.-.. +..+..+... .+.++..+..|.++-.... ..
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 466778888999999888664321110 0111111 2345554444 7788888888887766543 21
Q ss_pred ---eE---eEEEeecCCceEEEEEec---CCCEEEEEeCCCcEEEEEccCCcE-----EEEEecccccccEEEEEECCCC
Q psy12614 102 ---NI---KSSTAVTSGTCWCLSVHK---KKRLLAAGTEQGHINLFQISDEGL-----LYEKLLDRQQGRILCTAWHSSG 167 (708)
Q Consensus 102 ---~~---~~~~~~~~~~v~~~~~s~---~~~~la~~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~s~d~ 167 (708)
.+ ...+.. ...|.++...+ +..+|+..+..|.++...+..-.. .....+.. .+.+..+....++
T Consensus 85 ~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~ 162 (312)
T 1suu_A 85 SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKD 162 (312)
T ss_dssp ---CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTT
T ss_pred CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCC
Confidence 11 011221 23455554333 466788889999999888753211 11122333 4556555554445
Q ss_pred CEEEEecCC-eEEEEEcCC----C---ceEEEEEecccCCCCCceeEEEEEEcc-CCEEEEEcCCCcEEEEeCCCC----
Q psy12614 168 DYLVTGCAA-AVRVWDIHK----G---HAIHKMSLDKSSKFSKNTAVWCVAFCA-DFTIITGDSGGFVRFWDGKTG---- 234 (708)
Q Consensus 168 ~~l~~~~~d-~i~iwd~~~----~---~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~~~~~dg~i~~wd~~~~---- 234 (708)
..++..+.+ .+..+.... + +-+.-+... ....+..+...+ +..+++.+..|.....++..-
T Consensus 163 ~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~------~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~~~~~ 236 (312)
T 1suu_A 163 EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK------EGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKISELK 236 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC------TTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGSCBCC
T ss_pred CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC------CCCEEEEEEEECCCCeEEEEECCCceEEEEHHHhcccC
Confidence 566666666 776776643 1 122222222 144555555443 345888888998888876432
Q ss_pred ---eeEEEee---ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 235 ---VQWSDVK---THKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 235 ---~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+=+..+. .....+..+....+...+...+..|.+.-.....
T Consensus 237 R~~kGv~~~~~~k~~~~~lv~~~~~~~~~~l~~~t~~g~~~r~~~~~ 283 (312)
T 1suu_A 237 RGATGYTSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRTVAGK 283 (312)
T ss_dssp TTCCCEECSCTTCTTTCSEEEEEEECTTCEEEEEETTCEEEEEEGGG
T ss_pred CCCCCEEeeEccCCCCCeEEEEEEeCCCCEEEEEeCCCeEEEEEccc
Confidence 1122222 2234444443333445566666667555555544
No 366
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=49.90 E-value=24 Score=37.25 Aligned_cols=37 Identities=11% Similarity=0.213 Sum_probs=31.2
Q ss_pred cEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEee
Q psy12614 73 SIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAV 109 (708)
Q Consensus 73 ~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 109 (708)
.|.++.+...++++.+.|.++|+||+.+++++....-
T Consensus 223 ~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4666666688999999999999999999998877654
No 367
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=48.76 E-value=1.6e+02 Score=26.87 Aligned_cols=150 Identities=13% Similarity=0.093 Sum_probs=88.5
Q ss_pred CCCeEEEEecCCcEEEecCCCeE----EEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCc--------
Q psy12614 463 DSTLLLAVSLNGPLYIIDLSSLE----IKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQ-------- 530 (708)
Q Consensus 463 d~~~l~~~~~dg~i~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~-------- 530 (708)
+..+++.++.+|.+......+.. -+..+.... .+.+..+........++..+..|.+..++..+
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke----gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a 154 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE----GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGA 154 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT----TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTC
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC----CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCC
Confidence 56788889999985544322111 011111111 34666666666667888888999998888762
Q ss_pred -eee--ecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCce
Q psy12614 531 -HHA--SLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSL 607 (708)
Q Consensus 531 -~~~--~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l 607 (708)
+.. .+.. ...|.++...+++..|+..+..|.++...++.-.... +...... .+ ...+.+..+....++..+
T Consensus 155 ~Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~---R~gkGv~-~i-~~~~~lv~~~~~~~~~~i 228 (276)
T 3no0_A 155 RGVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTN---RGVKGTE-VS-GTKDTLVDLIPIKEEVEL 228 (276)
T ss_dssp CCEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCC---TTCCCEE-CC-CSSSCEEEEEEESSEEEE
T ss_pred CCEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCC---CCCcceE-EE-cCCCcEEEEEEeCCCCEE
Confidence 111 2222 3556666666667788999999999998876543320 0000000 11 233456655544445567
Q ss_pred EEEEcCeeEEE--EecC
Q psy12614 608 IYLMDDSALCV--INKN 622 (708)
Q Consensus 608 ~~~~~d~~i~~--wd~~ 622 (708)
+..+.+|.+.. ++.+
T Consensus 229 ~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 229 LITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEETTSCEEEEEEEGG
T ss_pred EEEcCCCeEEEeeeCHH
Confidence 77888888877 7764
No 368
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=48.06 E-value=1.7e+02 Score=27.12 Aligned_cols=229 Identities=10% Similarity=0.021 Sum_probs=120.0
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCCeEEE--------EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEE---CCC--
Q psy12614 36 PKSSRLAVSRADQSIEIWDISETPHVDR--------VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYD---MRR-- 100 (708)
Q Consensus 36 ~~~~~la~~~~dg~v~iwd~~~~~~~~~--------~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd---~~~-- 100 (708)
|+..++++.+.+|.|+--.+..-+.... .+... ..+..+... .+.|+..+..|.+.-.. +..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~---D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~ 77 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE---DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEAT 77 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC-----------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCC
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC---CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCC
Confidence 4566788888999998777654221110 11222 344444333 77777788888765554 332
Q ss_pred ----CeEeE---EEeecCCceEEEEEe---cCCCEEEEEeCCCcEEEEEccCCc-----EEEEEecccccccEEEEEECC
Q psy12614 101 ----LNIKS---STAVTSGTCWCLSVH---KKKRLLAAGTEQGHINLFQISDEG-----LLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 101 ----~~~~~---~~~~~~~~v~~~~~s---~~~~~la~~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~s~ 165 (708)
|.++. .+. ....|.++..- +++.+++..+..|.++...+..-. -.....+... +.+..+....
T Consensus 78 ~~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~ 155 (307)
T 1zi0_A 78 RGARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTS 155 (307)
T ss_dssp SSSCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEEC
T ss_pred CCCCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeC
Confidence 22221 122 23456555432 356678889999999998875211 1100223333 4555554444
Q ss_pred CCCEEEEecCC-eEEEEEcCCCc-------eEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCC--
Q psy12614 166 SGDYLVTGCAA-AVRVWDIHKGH-------AIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTG-- 234 (708)
Q Consensus 166 d~~~l~~~~~d-~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~-- 234 (708)
+...|+..+.+ .+..++...-. -..-+... ....|.++...+++ .+++.+..|.++-.++..-
T Consensus 156 ~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~------~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~ 229 (307)
T 1zi0_A 156 GEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG------EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPT 229 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC------TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCC
T ss_pred CCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC------CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhcc
Confidence 44455555555 65555654211 11112221 24556666544444 5888888999888776321
Q ss_pred -----eeEE--EeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 235 -----VQWS--DVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 235 -----~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+-+. .+....+.+..+....+...++..+.+|.+.-+....
T Consensus 230 ~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 230 KSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp CCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred CCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 1111 2222235555554444445666777788877777765
No 369
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=46.57 E-value=50 Score=34.19 Aligned_cols=58 Identities=14% Similarity=0.057 Sum_probs=41.7
Q ss_pred eEEEEEEccCCEEEEEcCC-------------CcEEEEeCCCCeeEEEeecc-ccCeEEEEEeCCCCEEEEE
Q psy12614 205 AVWCVAFCADFTIITGDSG-------------GFVRFWDGKTGVQWSDVKTH-KKDILALTVSEDENYLYCA 262 (708)
Q Consensus 205 ~v~~~~~~~~~~l~~~~~d-------------g~i~~wd~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~ 262 (708)
..-.|+|+|.|.|..+... ..+.+.+..+++..+.+.++ ...++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4567899999985544322 24667777778776666543 4689999999999888765
No 370
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=44.95 E-value=2e+02 Score=26.95 Aligned_cols=160 Identities=10% Similarity=0.069 Sum_probs=89.9
Q ss_pred EEEEecCCCeEEEEecCCcEEEecCC---------CeEEEEEecCCCCCccCcceEEE-EECC--CCcEEEEEecCCeEE
Q psy12614 457 HVLISADSTLLLAVSLNGPLYIIDLS---------SLEIKYCVDPYKSNLMSDVISLV-QMSE--CKQYIVCADRKSHVV 524 (708)
Q Consensus 457 ~~~~s~d~~~l~~~~~dg~i~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~-~~s~--~~~~l~~~~~d~~i~ 524 (708)
.+........|+..+..|.+|.+... .+..+..+-.... ...|..+ ...+ ++.+|+.++.+|.++
T Consensus 43 ~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~---~e~Iv~~~~~~~~~~~~~ll~~T~~G~iK 119 (323)
T 1wp5_A 43 AMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDR---DEEIIKAIPINDFELNGYFLFVTRNGMVK 119 (323)
T ss_dssp EEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCT---TCCEEEEEEESCTTSSCEEEEEETTSEEE
T ss_pred EEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCCC---CCEEEEEEEecccCCCceEEEEeCCCeEE
Confidence 34555566677778888885555321 1121111111111 3345544 4433 367899999999999
Q ss_pred EEECCc--------eee--ecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCC
Q psy12614 525 IWKNGQ--------HHA--SLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLP 594 (708)
Q Consensus 525 iw~~~~--------~~~--~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (708)
--.+.. +.. .+..- ..+..+....+...|+..+.+|.+..+....-... .+.........+ ...+.
T Consensus 120 rt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~--gR~a~GV~~i~L-~~~d~ 195 (323)
T 1wp5_A 120 KTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIV--GVRAAGVKGMNL-KEGDY 195 (323)
T ss_dssp EEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBC--CSSCCCEECCCC-CTTCC
T ss_pred EeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCccc--CCCCcCEEEEEe-CCCCE
Confidence 998861 111 22222 45555555555667888999999998887653222 110000001112 23356
Q ss_pred eeEEEeCCCCC-ceEEEEcCeeEEEEecCC
Q psy12614 595 VLGIEFDPQDS-SLIYLMDDSALCVINKNK 623 (708)
Q Consensus 595 i~~l~~s~~~~-~l~~~~~d~~i~~wd~~~ 623 (708)
|.++...+++. .|++.+..|..+..+++.
T Consensus 196 Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 196 IVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 77765444444 788889999888777653
No 371
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=44.54 E-value=63 Score=37.01 Aligned_cols=39 Identities=18% Similarity=0.308 Sum_probs=32.6
Q ss_pred cEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEec
Q psy12614 157 RILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLD 195 (708)
Q Consensus 157 ~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~ 195 (708)
.+.+++..++..++++.+.| ++++|++.+++++.+....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~ 278 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 278 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechh
Confidence 34556667788999999999 9999999999999887654
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=42.84 E-value=2e+02 Score=26.24 Aligned_cols=194 Identities=10% Similarity=0.046 Sum_probs=106.8
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEE---EECCCCeEeEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCc-
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNE---YDMRRLNIKSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEG- 144 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~v---wd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~- 144 (708)
..+..+.-. .++|+.-+..|.++- |++..++....+. ....|.++.... +..+++..+.+|.++...+..-.
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~ 102 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEY 102 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTT
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhh
Confidence 445555444 566666777776554 3433332111122 345566654421 56789999999999999876431
Q ss_pred ----EEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCC----C---ceEEEEEecccCCCCCceeEEEEEEc
Q psy12614 145 ----LLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHK----G---HAIHKMSLDKSSKFSKNTAVWCVAFC 212 (708)
Q Consensus 145 ----~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~----~---~~~~~~~~~~~~~~~~~~~v~~~~~~ 212 (708)
.. ...+.. .+.+..+....+...|+..+.. .+..++... + +-+.-+... ....|..+...
T Consensus 103 ~~~G~~-~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~------~~d~vv~~~~~ 174 (276)
T 3no0_A 103 KAQGMP-IIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE------KNDETSGLRIW 174 (276)
T ss_dssp CSTTEE-CSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC------TTCCEEEEEEE
T ss_pred hcCCeE-EEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC------CCCEEEEEEEe
Confidence 11 012322 3455555555555566666666 666666532 1 111112221 13445555444
Q ss_pred -cCCEEEEEcCCCcEEEEeCCC-------CeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEE--EEccC
Q psy12614 213 -ADFTIITGDSGGFVRFWDGKT-------GVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVC--FQRTR 275 (708)
Q Consensus 213 -~~~~l~~~~~dg~i~~wd~~~-------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i--w~~~~ 275 (708)
++..++..+..|.++...+.. ++-+..+ ...+.+..+....+...++..+.+|.+.. ++...
T Consensus 175 ~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 175 NGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp SSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred CCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 444688889999988887532 2223333 23445555544444456777788888887 87765
No 373
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=40.87 E-value=2.9e+02 Score=27.56 Aligned_cols=53 Identities=11% Similarity=0.240 Sum_probs=36.6
Q ss_pred ceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCe---eEEEee---------ccccCeEEEEEeCC
Q psy12614 203 NTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGV---QWSDVK---------THKKDILALTVSED 255 (708)
Q Consensus 203 ~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~---~~~~~~---------~~~~~i~~~~~s~~ 255 (708)
-...+.|+|.|||. ++++...|.|++++..... .+..+. ........|+|+|+
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 34578999999984 8888899999999754221 222221 11456789999996
No 374
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=39.76 E-value=2.4e+02 Score=26.43 Aligned_cols=112 Identities=12% Similarity=0.093 Sum_probs=72.4
Q ss_pred CCcEEEE-EEcC--CCCEEEEEeCCCcEEEEeCCCCCe------EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEE
Q psy12614 26 PKVINCI-ACEP--KSSRLAVSRADQSIEIWDISETPH------VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVN 94 (708)
Q Consensus 26 ~~~v~~~-~~s~--~~~~la~~~~dg~v~iwd~~~~~~------~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~ 94 (708)
...|.++ .+.+ +..++++.+.+|.|+.-.+..-.. ....+.. ...+..+... .+.|+..+..|.+.
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke---~D~lv~~~~~~~~d~ill~T~~G~~~ 170 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD---NDELVGAVLCSAGDDLLLVSANGQSI 170 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT---TCCEEEEEEECTTCEEEEEETTSEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC---CCEEEEEEEecCCCEEEEEECCCeEE
Confidence 3445555 4442 578999999999999987754111 1112222 2455555554 77888899999998
Q ss_pred EEECC--CCe---------EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 95 EYDMR--RLN---------IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 95 vwd~~--~~~---------~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
.+... .-. ....+. ....|.++...+++..|+.++..|.++.-.+.
T Consensus 171 rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 171 RFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp EEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 88877 311 111222 24557777766667788899999999888765
No 375
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=33.74 E-value=1.4e+02 Score=34.25 Aligned_cols=30 Identities=13% Similarity=0.170 Sum_probs=25.9
Q ss_pred CeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 246 DILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 246 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.+.+++..++..++++-+.|+++++|++.+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t 268 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLST 268 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTT
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCC
Confidence 445566778889999999999999999998
No 376
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=29.48 E-value=1.7e+02 Score=21.69 Aligned_cols=26 Identities=23% Similarity=0.368 Sum_probs=17.5
Q ss_pred ceEEEEcCCcEEEEEcCCeEEEEEecC
Q psy12614 345 TPVSLAKDIQHVLLQYTSHLELWSLGS 371 (708)
Q Consensus 345 ~~~~~s~~~~~l~~~~~~~i~i~~~~~ 371 (708)
..+.+..||.+++...++. .+|...+
T Consensus 53 ~~L~l~~dGnLvL~d~~~~-~vWss~t 78 (105)
T 4h3o_A 53 CSAVLQSDGNFVVYDSSGR-SLWASHS 78 (105)
T ss_dssp CEEEECTTSCEEEECTTCC-EEEECCC
T ss_pred EEEEEeCCccEEEECCCcE-EEEEecC
Confidence 4577888888887755544 4676554
No 377
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=28.87 E-value=85 Score=33.22 Aligned_cols=37 Identities=19% Similarity=0.448 Sum_probs=30.0
Q ss_pred cEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEec
Q psy12614 157 RILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLD 195 (708)
Q Consensus 157 ~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~ 195 (708)
.|.++.+ +..++++.+.| ++|+|++.+++++......
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~ 260 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDMV 260 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEETT
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeeccc
Confidence 3555554 47799999999 9999999999998887763
No 378
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=28.38 E-value=1.9e+02 Score=21.75 Aligned_cols=25 Identities=16% Similarity=0.100 Sum_probs=15.9
Q ss_pred EEEeCCCCcEEEEEcCCceEEEEEE
Q psy12614 408 CSVVSNDGKYVAYSTESCVRLHSLD 432 (708)
Q Consensus 408 ~~~~s~~g~~l~~~~d~~i~i~~~~ 432 (708)
.+.+..+|.+++...++...+|...
T Consensus 53 ~l~l~~dGNLVl~~~~~~~~vW~S~ 77 (111)
T 3mez_A 53 TLRLNNRGQLEIHSANSNTPVWVYP 77 (111)
T ss_dssp EEEECTTSCEEEECSSCSSCSEEES
T ss_pred EEEEcCCCcEEEEeCCCCEEEEEec
Confidence 4567778887776555555577543
No 379
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=27.17 E-value=4.2e+02 Score=25.39 Aligned_cols=280 Identities=12% Similarity=0.022 Sum_probs=129.8
Q ss_pred CCEEEEEcCCCcEEEEECCC-Ce-------EeEEEe----ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCC-----
Q psy12614 81 NDRLFSGGLQGFVNEYDMRR-LN-------IKSSTA----VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE----- 143 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~-~~-------~~~~~~----~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~----- 143 (708)
...++.-..||+|..|=... ++ ...... .....|..++. .....++...||.|+.|-....
T Consensus 10 ~~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~--G~~~~~~l~~~G~v~~wG~n~~GqLG~ 87 (389)
T 3kci_A 10 GRENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG--GEQTLFAVTADGKLYATGYGAGGRLGI 87 (389)
T ss_dssp -----------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEE--ETTEEEEEETTSCEEEEECCGGGTTSS
T ss_pred cccceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEe--CCCeEEEEcCCCcEEEEECCCCCCCCC
Confidence 45566677888888885433 11 111110 01123444433 3345555677888888864321
Q ss_pred ----cEEEEEeccc-ccccEEEEEECCCCCEEEEecCC-eEEEEEcCCC--------ceEEEEEecccCCCCCceeEEEE
Q psy12614 144 ----GLLYEKLLDR-QQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKG--------HAIHKMSLDKSSKFSKNTAVWCV 209 (708)
Q Consensus 144 ----~~~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~~v~~~ 209 (708)
.......+.. ....+..++.+......+....+ .|..|-.... ........-.. -....|..+
T Consensus 88 g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~---l~~~~i~~v 164 (389)
T 3kci_A 88 GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES---LRGIEVVDV 164 (389)
T ss_dssp SSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGG---GTTSCEEEE
T ss_pred CCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecc---cCCCeEEEE
Confidence 1111112221 22345556666666666666667 8999965321 01111111100 002346666
Q ss_pred EEccCCEEEEEcCCCcEEEEeCCC-Ce----------eEEEeec-cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCc
Q psy12614 210 AFCADFTIITGDSGGFVRFWDGKT-GV----------QWSDVKT-HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKP 277 (708)
Q Consensus 210 ~~~~~~~l~~~~~dg~i~~wd~~~-~~----------~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 277 (708)
+.... ..++...+|.|+.|=... ++ ....+.. ....|..++........+.-..||.++.|-....-
T Consensus 165 a~G~~-hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~G 243 (389)
T 3kci_A 165 AAGGA-HSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYG 243 (389)
T ss_dssp EECSS-EEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGG
T ss_pred EeCcC-eEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCC
Confidence 55432 345566789999996432 11 1111111 22356666654433566667789999999765421
Q ss_pred ccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCc------------eeecCccCCCCc
Q psy12614 278 QVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKT------------LVKYPCTLAQST 345 (708)
Q Consensus 278 ~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~------------~~~~~~~~~~~~ 345 (708)
++-. +. ......+..........|..++......+.-..+|.|..|-....- ...+. ......
T Consensus 244 qLG~--g~--~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~-~l~~~~ 318 (389)
T 3kci_A 244 KLGR--GG--SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQ-GLQGKK 318 (389)
T ss_dssp TTSS--SS--CCCEEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECG-GGTTCC
T ss_pred CCCC--CC--CCCccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEec-cCCCCC
Confidence 1111 11 1111111111111223477777776777777889999999764321 11111 122223
Q ss_pred eEEEEcCCc-EEEEEcCCeEEEEEecC
Q psy12614 346 PVSLAKDIQ-HVLLQYTSHLELWSLGS 371 (708)
Q Consensus 346 ~~~~s~~~~-~l~~~~~~~i~i~~~~~ 371 (708)
.+.++.... .++...++.+..|=...
T Consensus 319 v~~ia~G~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 319 VIAIATGSLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp EEEEEECSSEEEEEETTCCEEEEECCT
T ss_pred EEEEEeccCeEEEECCCCCEEEeeCCC
Confidence 344444333 34446788888887654
No 380
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=26.58 E-value=6.3e+02 Score=27.23 Aligned_cols=235 Identities=11% Similarity=-0.003 Sum_probs=0.0
Q ss_pred CCcEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCeEEEEEec-----CCCCCcEEEEEEe----CCEEEEEcCCC----
Q psy12614 26 PKVINCIACEPK-SSRLAVSRADQSIEIWDISETPHVDRVFIG-----DPLSNSIECLTWF----NDRLFSGGLQG---- 91 (708)
Q Consensus 26 ~~~v~~~~~s~~-~~~la~~~~dg~v~iwd~~~~~~~~~~~~~-----h~~~~~v~~l~~~----~~~l~s~~~d~---- 91 (708)
.+.|.+|+++|. ...+.++...|.|...+=....-....... .. ..|.+|++. +..++..+...
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~--~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNI--MGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGG--CSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccC--CceeEEEECCCCCCEEEEEeCccCCCcc
Q ss_pred cEEEEECCCCeEeEEEeecCC---------ceEEEEEecC-CCEEEEEeCCCcEEEEEccCCcEEEEEecc---cccccE
Q psy12614 92 FVNEYDMRRLNIKSSTAVTSG---------TCWCLSVHKK-KRLLAAGTEQGHINLFQISDEGLLYEKLLD---RQQGRI 158 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~~~---------~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~v 158 (708)
...+.....|+.=..+..... .+..++++|. ...+.++...+.|..=+=..........+. .....+
T Consensus 92 ~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 92 AAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp CEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEEESSTTSSCEEETTSCCCCSTTTCE
T ss_pred cEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEEECCCCcccCCCccCccccCCCCCe
Q ss_pred EEEEECC-CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeE------------------EEEEEcc-CCEE
Q psy12614 159 LCTAWHS-SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAV------------------WCVAFCA-DFTI 217 (708)
Q Consensus 159 ~~~~~s~-d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v------------------~~~~~~~-~~~l 217 (708)
..+.+.| ++..++.+..+ .-.......|+.-..+... .... ..+++.| ++.+
T Consensus 172 ~~i~~~p~~~~~~~~~~~~~~~v~~S~DgG~TW~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l 244 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATAPQGMYVTHDGGVSWEPVAGQ-------PSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFL 244 (789)
T ss_dssp EEEEECTTSTTCEEEEESSTTCEEEESSTTSSCEECTTC-------CCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEE
T ss_pred EEEEECCCCCCEEEEEEcCCCeEEEEcCCCcCcccCCCC-------cCccccccccccCcccccccccceeEEcCCCCeE
Q ss_pred EEE---------cCCCcEEEEeCCCCeeEEEeecccc---------------CeEEEEEeC-CCCEEEEEecC-------
Q psy12614 218 ITG---------DSGGFVRFWDGKTGVQWSDVKTHKK---------------DILALTVSE-DENYLYCAGVD------- 265 (708)
Q Consensus 218 ~~~---------~~dg~i~~wd~~~~~~~~~~~~~~~---------------~i~~~~~s~-~~~~l~~~~~d------- 265 (708)
+++ +..+.|..-+ ..|+.-..+..... .+..++++| +.+.++++..+
T Consensus 245 ~~~~~~~~~p~~g~~g~l~~S~-DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~~~~~~~ 323 (789)
T 1sqj_A 245 YVTYADYPGPWGVTFGEVWRQN-RTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPGPAL 323 (789)
T ss_dssp EEEEESSCSSSCCCCCCEEEEE-TTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECCCSCSSC
T ss_pred EEEEecCCCCCCCCCceEEEEe-CCCCceEECcCCCCccccccccccccccCceEEEEECCCCCCEEEEEEeccCCCccc
Q ss_pred CeEEE
Q psy12614 266 PTVVC 270 (708)
Q Consensus 266 g~i~i 270 (708)
+.|..
T Consensus 324 ~~l~~ 328 (789)
T 1sqj_A 324 DSIYL 328 (789)
T ss_dssp CCEEE
T ss_pred ccEEE
No 381
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=23.78 E-value=6e+02 Score=25.99 Aligned_cols=228 Identities=9% Similarity=0.075 Sum_probs=121.4
Q ss_pred CCCcEEEEEEcCCCCE-EEEEeCCCc----------------------------EEEEeCCCCCeEEEEEecCCCCCc--
Q psy12614 25 EPKVINCIACEPKSSR-LAVSRADQS----------------------------IEIWDISETPHVDRVFIGDPLSNS-- 73 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~-la~~~~dg~----------------------------v~iwd~~~~~~~~~~~~~h~~~~~-- 73 (708)
|-..+....|.-||+. +++...+|+ +.|+|-.+|+.+.. ..-....+.
T Consensus 177 ~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEyL~vfdG~TG~~l~~-~~~~p~rg~~~ 255 (591)
T 2zux_A 177 HYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVT-ANFEPARGNVS 255 (591)
T ss_dssp TSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEE-EECSSCCCCGG
T ss_pred ccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcEEEEEeCCCCCEEec-ccCCCCCCccc
Confidence 5566777888888865 777766665 67888777777653 221100011
Q ss_pred -------------EEEEEEe-C--CEEEEEc---CCCcEEEEECCCCeEeEEEeecC-------------CceEEEEEec
Q psy12614 74 -------------IECLTWF-N--DRLFSGG---LQGFVNEYDMRRLNIKSSTAVTS-------------GTCWCLSVHK 121 (708)
Q Consensus 74 -------------v~~l~~~-~--~~l~s~~---~d~~i~vwd~~~~~~~~~~~~~~-------------~~v~~~~~s~ 121 (708)
..++++. | ..++.+- .-..|..||+..+++........ ..+....+.-
T Consensus 256 ~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDg 335 (591)
T 2zux_A 256 DWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDG 335 (591)
T ss_dssp GGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSS
T ss_pred ccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCC
Confidence 3445554 2 2333332 22358889988887644433221 1233333444
Q ss_pred CCCE-EEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC--CEEEEecCC-----eEEEEEcCCCceEEEEE
Q psy12614 122 KKRL-LAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG--DYLVTGCAA-----AVRVWDIHKGHAIHKMS 193 (708)
Q Consensus 122 ~~~~-la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~--~~l~~~~~d-----~i~iwd~~~~~~~~~~~ 193 (708)
||+- |+.|+ .++| .+|+.++...+ +|...+..-.|.|+. ..++.+.++ ...+.|..+|+.+....
T Consensus 336 DG~dEIv~Gs-----~~iD-~dG~~L~st~~-gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 336 DGKDEIIFGS-----MAVD-HDGKGMYSTGL-GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp SSSCEEEETT-----EEEC-TTSCEEEECSC-CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred CCCceEEEee-----eEEC-CCCCEeeeCCC-CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcC
Confidence 5542 22222 1222 23444432333 788888888888874 466665543 46678999999998775
Q ss_pred ecccCCCCCceeEEEEEEccCC---EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCC-CEEEEEecCCeEE
Q psy12614 194 LDKSSKFSKNTAVWCVAFCADF---TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDE-NYLYCAGVDPTVV 269 (708)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~~~~~---~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~ 269 (708)
.. .+.+......|.|+. ++.+ ++ .+|+. +|+.+.... ....-..+-|..|. +.++- .+.|.
T Consensus 409 ~~-----~d~Gr~~~~Didp~~pG~E~w~---~~--~l~~~-~G~~i~~~~-p~~~N~~i~WdGDl~relld---~~~i~ 473 (591)
T 2zux_A 409 AG-----KDVGRGMAADIDPRYPGQEVWA---NG--SLYSA-KGVKIGSGV-PSSTNFGIWWDGDLLREQLD---SNRID 473 (591)
T ss_dssp CS-----SCCCCEEEECCCTTSSSCEEEE---TT--EEECT-TSCBCSSCC-CSCCSEEECCSSSSSCEEEE---TTEEE
T ss_pred CC-----CCCCceeEEecCCCCCceEEEe---cC--ceECC-CCCEecCCC-CCCcceeEEECCCCcHhhhC---CceEE
Confidence 43 123444445566653 3333 22 46775 355443221 11112245666665 33332 24677
Q ss_pred EEEccC
Q psy12614 270 CFQRTR 275 (708)
Q Consensus 270 iw~~~~ 275 (708)
-|+...
T Consensus 474 k~~~~~ 479 (591)
T 2zux_A 474 KWDYQN 479 (591)
T ss_dssp EEETTT
T ss_pred ecccCC
Confidence 787665
No 382
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=23.25 E-value=2.4e+02 Score=21.17 Aligned_cols=26 Identities=15% Similarity=0.184 Sum_probs=15.4
Q ss_pred ceEEEEcCCcEEEEEcCCeEEEEEec
Q psy12614 345 TPVSLAKDIQHVLLQYTSHLELWSLG 370 (708)
Q Consensus 345 ~~~~~s~~~~~l~~~~~~~i~i~~~~ 370 (708)
..+.+..+|.+++...++...+|...
T Consensus 52 ~~l~l~~dGNLVl~~~~~~~~vW~S~ 77 (111)
T 3mez_A 52 CTLRLNNRGQLEIHSANSNTPVWVYP 77 (111)
T ss_dssp CEEEECTTSCEEEECSSCSSCSEEES
T ss_pred EEEEEcCCCcEEEEeCCCCEEEEEec
Confidence 35667777877776544443466543
No 383
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=22.06 E-value=2.4e+02 Score=28.40 Aligned_cols=58 Identities=9% Similarity=0.082 Sum_probs=35.9
Q ss_pred CeEEEEecCCcEEEecCCC--------eEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEE
Q psy12614 465 TLLLAVSLNGPLYIIDLSS--------LEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVI 525 (708)
Q Consensus 465 ~~l~~~~~dg~i~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~i 525 (708)
..+..|+.+|.|..+-... ...+..+...+. ..+|..+.++++..+|++++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~---~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFRE---PTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSS---CCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCC---CCccceEEEcCCCCEEEEEECCeEEEE
Confidence 3466688888855543221 012223333211 457899999999999999988876655
No 384
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=21.79 E-value=4.9e+02 Score=24.24 Aligned_cols=230 Identities=9% Similarity=0.005 Sum_probs=120.8
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCC---CeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEEC---CC------C
Q psy12614 36 PKSSRLAVSRADQSIEIWDISET---PHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDM---RR------L 101 (708)
Q Consensus 36 ~~~~~la~~~~dg~v~iwd~~~~---~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~---~~------~ 101 (708)
|+..++++.+.+|.|+--.+..- ......+... ..+..+... .+.|+..+..|.+.-... .. |
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~---D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G 79 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT---DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT---CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC---CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCC
Confidence 56677888889998887654410 0000012222 344444444 778888888888665543 22 2
Q ss_pred eEeEE-Ee-ecCCceEEEEEec---CCCEEEEEeCCCcEEEEEccCC------cEEEEEecccccccEEEEEECCCCCEE
Q psy12614 102 NIKSS-TA-VTSGTCWCLSVHK---KKRLLAAGTEQGHINLFQISDE------GLLYEKLLDRQQGRILCTAWHSSGDYL 170 (708)
Q Consensus 102 ~~~~~-~~-~~~~~v~~~~~s~---~~~~la~~~~d~~i~iwd~~~~------~~~~~~~~~~~~~~v~~~~~s~d~~~l 170 (708)
.++.. +. .....|.++..-+ ++.+++.++.+|.++...+..- .-.....+.. .+.+..+....+...|
T Consensus 80 ~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i 158 (323)
T 1wp5_A 80 QHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNEL 158 (323)
T ss_dssp EEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEE
T ss_pred cChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEE
Confidence 22211 11 1233455543333 2567888999999999887521 1111122332 2455555554445556
Q ss_pred EEecCC-eEEEEEcCCC-------ceEEEEEecccCCCCCceeEEEEEE-ccCC-EEEEEcCCCcEEEEeCCC-------
Q psy12614 171 VTGCAA-AVRVWDIHKG-------HAIHKMSLDKSSKFSKNTAVWCVAF-CADF-TIITGDSGGFVRFWDGKT------- 233 (708)
Q Consensus 171 ~~~~~d-~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~-~l~~~~~dg~i~~wd~~~------- 233 (708)
+..+.+ .+..+....- +-+.-+... ....|.++.. .++. .+++.+..|..+..++..
T Consensus 159 ~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~------~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg 232 (323)
T 1wp5_A 159 FLVTHNGYALWFDESEVSIVGVRAAGVKGMNLK------EGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRA 232 (323)
T ss_dssp EEEETTSEEEEEEGGGSCBCCSSCCCEECCCCC------TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTT
T ss_pred EEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeC------CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCC
Confidence 555555 6666665421 112222221 1444555543 3444 588888888877766543
Q ss_pred CeeEEEee---ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 234 GVQWSDVK---THKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 234 ~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
++-+..+. .....+..+....++..++..+.+|.+....+..
T Consensus 233 ~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 233 KRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp SCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred CCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 11122222 1222454443334445666777788877777765
No 385
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=21.71 E-value=2.6e+02 Score=21.03 Aligned_cols=82 Identities=9% Similarity=0.054 Sum_probs=0.0
Q ss_pred CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccc
Q psy12614 166 SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHK 244 (708)
Q Consensus 166 d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 244 (708)
++.+.+.-..| .+.+++...+..+..-.... ...-..+.+..+|.|+.-..++.+ +|...+.
T Consensus 23 ~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~------~~~~~~l~l~~dGNLVl~d~~~~~-iW~S~t~---------- 85 (113)
T 3mez_B 23 TRDYSLVMRDDCNLVLTKGSKTNIVWESGTSG------RGQHCFMRLGHSGELDITDDRLNT-VFVSNTV---------- 85 (113)
T ss_dssp ETTEEEEECTTSCEEEEETTTTEEEEECCCTT------SCSSCEEEECTTSCEEEECTTSCE-EEECSCC----------
T ss_pred cCCEEEEEcCCCEEEEEECCCCEEEEECCccc------CCcCEEEEEeCCCcEEEECCCCCE-EEECCCc----------
Q ss_pred cCeEEEEEeCCCCEEEEEecCCeEEEEE
Q psy12614 245 KDILALTVSEDENYLYCAGVDPTVVCFQ 272 (708)
Q Consensus 245 ~~i~~~~~s~~~~~l~~~~~dg~i~iw~ 272 (708)
.+.+.+.++-..||.+.+|+
T Consensus 86 --------~~~~~~~~~L~~dGnlvly~ 105 (113)
T 3mez_B 86 --------GQEGDYVLILQINGQAVVYG 105 (113)
T ss_dssp --------CSSSCCEEEECTTSCEEEEC
T ss_pred --------CCCCCEEEEEcCCceEEEec
Done!