Your job contains 1 sequence.
>psy12614
MSHMCKKRNTMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH
VDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVH
KKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRV
WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDV
KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI
HEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQY
TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY
STESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIID
LSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHASLPRYRK
PSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEF
DPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSSNSTHVIESKVAFHFV
RRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPPTWTLTLVVGLTSNFH
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12614
(708 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5R994 - symbol:DKFZp459B1739 "Putative unchara... 783 7.9e-78 1
UNIPROTKB|Q969X6 - symbol:CIRH1A "Cirhin" species:9606 "H... 781 1.3e-77 1
ZFIN|ZDB-GENE-040426-2466 - symbol:cirh1a "cirrhosis, aut... 750 2.5e-74 1
MGI|MGI:1096573 - symbol:Cirh1a "cirrhosis, autosomal rec... 749 3.1e-74 1
FB|FBgn0263605 - symbol:l(3)72Dn "lethal (3) 72Dn" specie... 744 1.1e-73 1
RGD|1311341 - symbol:Cirh1a "cirrhosis, autosomal recessi... 733 1.6e-72 1
UNIPROTKB|E1BC40 - symbol:CIRH1A "Uncharacterized protein... 721 2.9e-71 1
SGD|S000002732 - symbol:UTP4 "Subunit of U3-containing 90... 421 3.0e-38 2
POMBASE|SPBC19F5.02c - symbol:utp4 "U3 snoRNP protein Utp... 300 4.9e-34 2
UNIPROTKB|I3LIQ3 - symbol:CIRH1A "Uncharacterized protein... 351 3.1e-31 1
TAIR|locus:2124377 - symbol:PCN "AT4G07410" species:3702 ... 216 1.5e-23 2
CGD|CAL0006401 - symbol:UTP4 species:5476 "Candida albica... 292 2.6e-22 1
UNIPROTKB|Q5AJF9 - symbol:CaO19.1633 "Putative uncharacte... 292 2.6e-22 1
ASPGD|ASPL0000010371 - symbol:AN3794 species:162425 "Emer... 246 1.1e-21 3
TAIR|locus:2015909 - symbol:AT1G27470 "AT1G27470" species... 187 1.6e-18 2
WB|WBGene00021276 - symbol:Y23H5B.5 species:6239 "Caenorh... 150 4.9e-07 1
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 151 6.8e-07 1
TAIR|locus:2157762 - symbol:AT5G50230 "AT5G50230" species... 146 1.2e-06 1
WB|WBGene00010582 - symbol:K05C4.5 species:6239 "Caenorha... 141 7.0e-06 2
DICTYBASE|DDB_G0293462 - symbol:cirh1a "U3 snoRNP protein... 138 7.3e-06 1
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 140 7.4e-06 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 138 8.6e-06 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 138 8.6e-06 1
MGI|MGI:1341200 - symbol:Pwp2 "PWP2 periodic tryptophan p... 141 9.2e-06 1
UNIPROTKB|O93277 - symbol:WDR1 "WD repeat-containing prot... 137 1.4e-05 1
DICTYBASE|DDB_G0284621 - symbol:pwp2 "periodic tryptophan... 139 1.5e-05 1
UNIPROTKB|F1P1L6 - symbol:AAMP "Uncharacterized protein" ... 104 1.7e-05 2
UNIPROTKB|F1ND84 - symbol:AAMP "Uncharacterized protein" ... 104 1.7e-05 2
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 136 1.8e-05 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 136 1.8e-05 1
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 131 1.8e-05 1
RGD|1582817 - symbol:Pwp2 "PWP2 periodic tryptophan prote... 138 1.9e-05 1
TAIR|locus:2040804 - symbol:WDR55 "AT2G34260" species:370... 131 2.6e-05 1
UNIPROTKB|O75083 - symbol:WDR1 "WD repeat-containing prot... 134 3.0e-05 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 138 3.1e-05 1
UNIPROTKB|E1BL00 - symbol:PWP2 "Uncharacterized protein" ... 136 3.2e-05 1
UNIPROTKB|Q5ZI36 - symbol:CDC20 "Uncharacterized protein"... 132 3.8e-05 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 105 6.0e-05 2
UNIPROTKB|Q2KJH4 - symbol:WDR1 "WD repeat-containing prot... 131 6.4e-05 1
UNIPROTKB|E1BZK6 - symbol:EML6 "Uncharacterized protein" ... 102 7.1e-05 3
UNIPROTKB|Q3SZK1 - symbol:AAMP "Angio-associated migrator... 94 9.4e-05 2
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 131 9.9e-05 1
ZFIN|ZDB-GENE-040426-2044 - symbol:cdc20 "cell division c... 128 0.00010 1
RGD|620477 - symbol:Cdc20 "cell division cycle 20" specie... 128 0.00010 1
UNIPROTKB|Q62623 - symbol:Cdc20 "Cell division cycle prot... 128 0.00010 1
UNIPROTKB|Q6PBD6 - symbol:wdr61 "WD repeat-containing pro... 116 0.00011 2
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 130 0.00012 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 125 0.00012 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 128 0.00013 1
FB|FBgn0039867 - symbol:CstF-50 "CstF-50" species:7227 "D... 126 0.00013 1
RGD|1305789 - symbol:Wdr1 "WD repeat domain 1" species:10... 128 0.00014 1
RGD|1306281 - symbol:Aamp "angio-associated, migratory ce... 93 0.00015 2
UNIPROTKB|Q13685 - symbol:AAMP "Angio-associated migrator... 92 0.00015 2
UNIPROTKB|Q5RCG7 - symbol:AAMP "Angio-associated migrator... 92 0.00015 2
UNIPROTKB|Q7YR70 - symbol:AAMP "Angio-associated migrator... 92 0.00016 2
UNIPROTKB|Q12834 - symbol:CDC20 "Cell division cycle prot... 126 0.00017 1
UNIPROTKB|Q15269 - symbol:PWP2 "Periodic tryptophan prote... 129 0.00018 1
MGI|MGI:1859866 - symbol:Cdc20 "cell division cycle 20" s... 125 0.00022 1
FB|FBgn0001086 - symbol:fzy "fizzy" species:7227 "Drosoph... 125 0.00023 1
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 138 0.00026 2
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 124 0.00027 1
MGI|MGI:1337100 - symbol:Wdr1 "WD repeat domain 1" specie... 125 0.00029 1
DICTYBASE|DDB_G0279507 - symbol:plrg1 "putative RNA splic... 124 0.00029 1
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 125 0.00029 1
UNIPROTKB|Q6ZMW3 - symbol:EML6 "Echinoderm microtubule-as... 96 0.00029 3
UNIPROTKB|F1MRW5 - symbol:CDC20 "Uncharacterized protein"... 123 0.00036 1
UNIPROTKB|Q9W7F2 - symbol:wdr1-a "WD repeat-containing pr... 110 0.00038 2
SGD|S000002971 - symbol:CDH1 "Activator of anaphase-promo... 123 0.00043 1
UNIPROTKB|Q5H7C0 - symbol:CDC20 "Cell division cycle prot... 122 0.00046 1
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 96 0.00064 2
UNIPROTKB|J9P7H8 - symbol:EML6 "Uncharacterized protein" ... 96 0.00064 3
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 117 0.00069 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 127 0.00072 2
MGI|MGI:2442895 - symbol:Eml6 "echinoderm microtubule ass... 96 0.00072 3
UNIPROTKB|F1RKU4 - symbol:WDR61 "Uncharacterized protein"... 116 0.00078 1
UNIPROTKB|Q6GMD2 - symbol:wdr61 "WD repeat-containing pro... 116 0.00089 1
UNIPROTKB|Q2KID6 - symbol:PLRG1 "Pleiotropic regulator 1"... 99 0.00090 2
UNIPROTKB|O43660 - symbol:PLRG1 "Pleiotropic regulator 1"... 99 0.00090 2
UNIPROTKB|E2QYT6 - symbol:PLRG1 "Uncharacterized protein"... 99 0.00091 2
UNIPROTKB|F1PX92 - symbol:EML6 "Uncharacterized protein" ... 96 0.00094 3
>UNIPROTKB|Q5R994 [details] [associations]
symbol:DKFZp459B1739 "Putative uncharacterized protein
DKFZp459B1739" species:9601 "Pongo abelii" [GO:0005730 "nucleolus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294 SMART:SM00320
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR011047
SUPFAM:SSF50998 KO:K14548 CTD:84916 HOVERGEN:HBG050963
HOGENOM:HOG000095656 EMBL:CR859497 RefSeq:NP_001125977.1
UniGene:Pab.18989 ProteinModelPortal:Q5R994 GeneID:100172915
KEGG:pon:100172915 InParanoid:Q5R994 Uniprot:Q5R994
Length = 686
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 217/703 (30%), Positives = 341/703 (48%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I C+A +S+RLAVSR D ++EI+++S ++ F G
Sbjct: 1 MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHE- 59
Query: 71 SNSIECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129
S + E L W RLFS GL G + EYD++ LNIK + G W ++ L G
Sbjct: 60 SRATEALCWAEGQRLFSAGLNGEIMEYDLQALNIKYAMDAFGGPIWSMAASPSGSQLLVG 119
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAI 189
E G + LFQI+ + + +E+ DRQ+ RIL +WHSSG ++ G + V+D+ G A+
Sbjct: 120 CEDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHSSGTHIAAGSIDYISVFDVKSGSAV 179
Query: 190 HKMSLDKS--SKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTH---K 244
HKM +D+ + VW VAF +D T+I+ DS G V+FWD TG VK+H
Sbjct: 180 HKMIVDRQYMGASKRKCIVWGVAFLSDGTVISVDSAGKVQFWDSATGTL---VKSHLIAN 236
Query: 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304
D+ ++ V++ E+ + TV FQ P V S S +Q WVR+ H D
Sbjct: 237 ADVQSIAVADQEDSFVVGTAEGTVFHFQLV--P-VTSNSNEKQ----WVRTKPFQHHTHD 289
Query: 305 VKSLALHGNRXXXXXXXXXXXXXXXPPKTLVK-YPCTLAQST-P----VSLAKDIQHVLL 358
V+++A K VK Y L + T P +S +K Q +L
Sbjct: 290 VRTVAHSPTALISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLF 349
Query: 359 QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418
Q+ HLELW LGS +T N +PL ++ + I CS +S G ++
Sbjct: 350 QFAHHLELWRLGSTVATG----KNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGSWI 405
Query: 419 AYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYI 478
AYST S L+ L+ + D + R+ +PA F +L S DST L S G L+I
Sbjct: 406 AYSTVSRFFLYRLNYEHDNISLKRVSKMPA--FLRCALQILFSEDSTKLFVASNQGALHI 463
Query: 479 IDLSSLEIKY--CVDPYKSNLMSDVISLVQMSECKQYIVCADRKS--HVVIWKNGQHHAS 534
+ LS K+ P + + + L+ +S ++ + + HV K + H +
Sbjct: 464 VQLSGGSFKHLHAFQPQSGTV--EAMCLLAVSPDGHWLAASGTSAGVHVYDVKQLKLHCT 521
Query: 535 LPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQL 593
+P Y P TAMAI P + LV +SD ++ E+ + K +T +SR ++ + WL R
Sbjct: 522 VPAYNFPVTAMAIAPNTNNLVIAHSDQQVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDT 581
Query: 594 PVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSSNSTHVIES 653
P+ I F P+ I L D C+I+K+ L + + P +N + V+
Sbjct: 582 PITHISFHPKRPMHILLHDAYMFCIIDKSLPLPNDKTLLYNPFPP------TNESDVVRR 635
Query: 654 KVA--FHFVRRNKHLVYFGSLNDKEMLSVQVNPLS-FMEKLPP 693
+ A F + K L++ L+++ +++V+ PL + +LPP
Sbjct: 636 RTAHAFKISKIYKPLLFMDLLDERTLVAVE-RPLDDIIAQLPP 677
>UNIPROTKB|Q969X6 [details] [associations]
symbol:CIRH1A "Cirhin" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006351
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14548 EMBL:AB075868
EMBL:AK027419 EMBL:AK027445 EMBL:AK027584 EMBL:AK027634
EMBL:AK027675 EMBL:AK074795 EMBL:BC000167 EMBL:BC009348
IPI:IPI00239815 IPI:IPI00399195 IPI:IPI00399197 RefSeq:NP_116219.2
UniGene:Hs.461113 ProteinModelPortal:Q969X6 SMR:Q969X6
IntAct:Q969X6 STRING:Q969X6 PhosphoSite:Q969X6 DMDM:41016916
SWISS-2DPAGE:Q969X6 PaxDb:Q969X6 PRIDE:Q969X6
Ensembl:ENST00000314423 Ensembl:ENST00000352319
Ensembl:ENST00000563094 GeneID:84916 KEGG:hsa:84916 UCSC:uc002ewr.2
UCSC:uc002ews.4 UCSC:uc010cfi.3 CTD:84916 GeneCards:GC16P069166
HGNC:HGNC:1983 HPA:HPA041139 MIM:604901 MIM:607456
neXtProt:NX_Q969X6 Orphanet:168583 PharmGKB:PA26520
HOVERGEN:HBG050963 InParanoid:Q969X6 OMA:WSRTVQK OrthoDB:EOG4JQ3X0
PhylomeDB:Q969X6 ChiTaRS:CIRH1A GenomeRNAi:84916 NextBio:75316
Bgee:Q969X6 CleanEx:HS_CIRH1A Genevestigator:Q969X6
GermOnline:ENSG00000141076 Uniprot:Q969X6
Length = 686
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 220/703 (31%), Positives = 343/703 (48%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I C+A +S+RLAVSR D ++EI+++S ++ F G
Sbjct: 1 MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHE- 59
Query: 71 SNSIECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129
S + E L W RLFS GL G + EYD++ LNIK + G W ++ L G
Sbjct: 60 SRATEALCWAEGQRLFSAGLNGEIMEYDLQALNIKYAMDAFGGPIWSMAASPSGSQLLVG 119
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAI 189
E G + LFQI+ + + +E+ DRQ+ RIL +WH SG ++ G + V+D+ G A+
Sbjct: 120 CEDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHPSGTHIAAGSIDYISVFDVKSGSAV 179
Query: 190 HKMSLDKSSK-FSKNTA-VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTH---K 244
HKM +D+ SK VW VAF +D TII+ DS G V+FWD TG VK+H
Sbjct: 180 HKMIVDRQYMGVSKRKCIVWGVAFLSDGTIISVDSAGKVQFWDSATGTL---VKSHLIAN 236
Query: 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304
D+ ++ V++ E+ + TV FQ P V S S +Q WVR+ H D
Sbjct: 237 ADVQSIAVADQEDSFVVGTAEGTVFHFQLV--P-VTSNSSEKQ----WVRTKPFQHHTHD 289
Query: 305 VKSLALHGNRXXXXXXXXXXXXXXXPPKTLVK-YPCTLAQST-P----VSLAKDIQHVLL 358
V+++A K VK Y L + T P +S +K Q +L
Sbjct: 290 VRTVAHSPTALISGGTDTHLVFRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLF 349
Query: 359 QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418
Q+ HLELW LGS +T N +PL ++ + I CS +S G ++
Sbjct: 350 QFAHHLELWRLGSTVATG----KNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGSWI 405
Query: 419 AYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYI 478
AYST S L+ L+ + D + R+ +PA L ++ +L S DST L S G L+I
Sbjct: 406 AYSTVSRFFLYRLNYEHDNISLKRVSKMPAFLRSAL--QILFSEDSTKLFVASNQGALHI 463
Query: 479 IDLSSLEIKY--CVDPYKSNLMSDVISLVQMSECKQYIVCADRKS--HVVIWKNGQHHAS 534
+ LS K+ P + + + L+ +S ++ + + HV K + H +
Sbjct: 464 VQLSGGSFKHLHAFQPQSGTV--EAMCLLAVSPDGNWLAASGTSAGVHVYNVKQLKLHCT 521
Query: 535 LPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQL 593
+P Y P TAMAI P + LV +SD ++ E+ + K +T +SR ++ + WL R
Sbjct: 522 VPAYNFPVTAMAIAPNTNNLVIAHSDQQVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDT 581
Query: 594 PVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSSNSTHVIES 653
P+ I F P+ I L D C+I+K+ L + + P +N + VI
Sbjct: 582 PITHISFHPKRPMHILLHDAYMFCIIDKSLPLPNDKTLLYNPFPP------TNESDVIRR 635
Query: 654 KVA--FHFVRRNKHLVYFGSLNDKEMLSVQVNPLS-FMEKLPP 693
+ A F + K L++ L+++ +++V+ PL + +LPP
Sbjct: 636 RTAHAFKISKIYKPLLFMDLLDERTLVAVE-RPLDDIIAQLPP 677
>ZFIN|ZDB-GENE-040426-2466 [details] [associations]
symbol:cirh1a "cirrhosis, autosomal recessive 1A
(cirhin)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-2466 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14548 CTD:84916
HOVERGEN:HBG050963 OrthoDB:EOG4JQ3X0 GeneTree:ENSGT00390000008662
HOGENOM:HOG000095656 eggNOG:NOG264702 EMBL:CT025859 EMBL:BC065322
IPI:IPI00510382 RefSeq:NP_998447.1 UniGene:Dr.7926 STRING:Q6P125
Ensembl:ENSDART00000010821 GeneID:406571 KEGG:dre:406571
InParanoid:Q6P125 NextBio:20818130 Uniprot:Q6P125
Length = 685
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 201/697 (28%), Positives = 347/697 (49%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I +A + R+A ++ + S+EI+ S+ +++ G
Sbjct: 1 MGEFKVHRVRFFEYVPSGIRALAFNQHNERMAAAKMNGSVEIFHCSDRFFQEKIIPGREQ 60
Query: 71 SNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT 130
+ IE LTW +RLFS GL G + EYD+ +K + G W ++ +++ LA G
Sbjct: 61 AG-IEGLTWVGERLFSAGLNGVITEYDLTNQRVKYTIDAYGGPIWAITGNQQGTHLAVGC 119
Query: 131 EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIH 190
E G + LF+++++ + +E+ LDRQ+GRI+ +WH SG + G ++V+++ GH+ H
Sbjct: 120 EDGTVKLFEVTEDKIQFERNLDRQKGRIISLSWHPSGSKIAAGMMDMIQVFNVETGHSKH 179
Query: 191 KMSLDKSSKFS--KNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDIL 248
++ +D+ S K VW V + +D TII+GDS G V+ W TG K D+L
Sbjct: 180 RILVDRGYGTSRGKECVVWSVVYLSDGTIISGDSVGMVKMWRDDTGTLIKSHNITKSDVL 239
Query: 249 ALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSL 308
+L+VS++E+ + + VV FQ V E WVR+ H DV+++
Sbjct: 240 SLSVSQNEDSIVAGTSEGFVVQFQFLS--MVL-----ENNEKDWVRTRTFRNHTHDVRAV 292
Query: 309 ALHGNRXXXXXXXXXXXXXXXPPKTLVKYPCTLAQST--P----VSLAKDIQHVLLQYTS 362
A K VK + + P VS A+ +L QY
Sbjct: 293 AEITTAVVSGGMDTQLVVRPLLDKHEVKSSASKLRKIQFPHRSLVSCARKAGTLLFQYPG 352
Query: 363 HLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST 422
HLELW LG ++ + S + L P ++ + IRCS VS G+++AYST
Sbjct: 353 HLELWRLGESEGEGIPGSS----LLLKRKPEKLLHLKVKGEDHIRCSAVSPCGEWIAYST 408
Query: 423 ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLS 482
S +RL+ L D + I++I LP L + + + S+DST L + S ++++ LS
Sbjct: 409 TSSLRLYKLHCDSNNVSITKISKLPKVLGSA--SQLCFSSDSTHLFSASTQSSVHMVSLS 466
Query: 483 SLEIKYCVDPYKSNLMS-DVISLVQMSECKQYIVCA--DRKSHVVIWKNGQHHASLPRYR 539
E K+ V +K+ S I L+ SE +++ A D + H+ + + H ++P Y
Sbjct: 467 QPECKF-VATFKTKSGSHQAIHLLAASEDGKWLASANIDNEVHIYNLQTRKAHCTVPIYS 525
Query: 540 KPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQLPVLGI 598
+AMAIHPT + L V++D +I EF + +K +T +SR ++ + WL R P L +
Sbjct: 526 SAVSAMAIHPTTNCLFMVHADQQIFEFSIEQKEYTDWSRLVQRQGLHRIWLERDTPCLNV 585
Query: 599 EFDPQDSSLIYLMDDSALCVINKNKSLAHADAK-IPRLGPKVVSGDSSNS-THVIESKVA 656
F+ ++ S + L D C+I++++ L + ++ + +L + + + S +H A
Sbjct: 586 TFNQKNPSHVILHDMYMFCIIDQSQPLPDSKSQFLNQLTLRSLPEEQRKSYSH------A 639
Query: 657 FHFVRRNKHLVYFGSLNDKEMLSVQVNPLS-FMEKLP 692
F + K L+ + D+ ++ V+ PL +LP
Sbjct: 640 FKVCKTFKELLCVDVMGDQSLVVVE-RPLEDITAQLP 675
>MGI|MGI:1096573 [details] [associations]
symbol:Cirh1a "cirrhosis, autosomal recessive 1A (human)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1096573 GO:GO:0005730
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006351 KO:K14548 CTD:84916 HOVERGEN:HBG050963
OMA:WSRTVQK OrthoDB:EOG4JQ3X0 ChiTaRS:CIRH1A EMBL:AK173318
EMBL:BC018262 EMBL:BC027399 EMBL:BC068113 EMBL:X80433 EMBL:X80434
IPI:IPI00331601 PIR:S46930 RefSeq:NP_035704.2 UniGene:Mm.10665
ProteinModelPortal:Q8R2N2 SMR:Q8R2N2 IntAct:Q8R2N2 STRING:Q8R2N2
PhosphoSite:Q8R2N2 PaxDb:Q8R2N2 PRIDE:Q8R2N2
Ensembl:ENSMUST00000047629 GeneID:21771 KEGG:mmu:21771
UCSC:uc009ngr.2 GeneTree:ENSGT00390000008662 HOGENOM:HOG000095656
InParanoid:Q8R2N2 NextBio:301108 Bgee:Q8R2N2 CleanEx:MM_CIRH1A
Genevestigator:Q8R2N2 GermOnline:ENSMUSG00000041438 Uniprot:Q8R2N2
Length = 686
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 211/700 (30%), Positives = 337/700 (48%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I C+A +S+RLAVSR D ++EI+++S ++ F G
Sbjct: 1 MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHE- 59
Query: 71 SNSIECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129
S E L W RLFS GL G + EYD++ LNIK + G W ++ L G
Sbjct: 60 SRGTEALCWAGGQRLFSAGLNGEILEYDLQALNIKYTLDAFGGPIWSMTASPSGSQLLVG 119
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAI 189
E G + LF+++ E + + + DRQ+ RIL WH +G ++ G + V+D+ G I
Sbjct: 120 CEDGSVKLFEVTPEKIQFARNFDRQKSRILSLCWHPAGTHVAAGSLDYISVFDVKSGSII 179
Query: 190 HKMSLDKSSK-FSKNTA-VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTH---K 244
KM LD+ +K+ VW VAF +D T+I+ DS G V+ WD TG VK+H
Sbjct: 180 RKMVLDRQHLGVTKSRCIVWGVAFLSDGTVISVDSVGKVQLWDSATGTL---VKSHLVAN 236
Query: 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304
D+ ++ V++ E+ + TV FQ + S S +Q WVR+ H D
Sbjct: 237 ADVQSIAVADQEDSFVVGTAEGTVFHFQLV---SMTSNSSEKQ----WVRTKPFQHHTHD 289
Query: 305 VKSLALHGNRXXXXXXXXXXXXXXXPPKTLVK-YPCTLAQST-P----VSLAKDIQHVLL 358
V+++A + VK Y L + T P +S +K Q +L
Sbjct: 290 VRAVAHSPTALISGGTDTHLVIRPLMERVEVKNYDAALRKITFPHRRLISCSKRRQLLLF 349
Query: 359 QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418
Q+ HLELW LGS +T N +PL ++ + I CS VS G ++
Sbjct: 350 QFAHHLELWRLGSTSATG----KNGDTLPLSKNADHLLHLKTKGPENIICSCVSPCGSWI 405
Query: 419 AYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYI 478
AYST S L+ L + D + R+ LP+ L ++ H+L S DST LL S G L+I
Sbjct: 406 AYSTASRFFLYRLKYERDNISLQRVSKLPSFLRSAL--HILFSEDSTKLLVASNQGSLHI 463
Query: 479 IDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKS--HVVIWKNGQHHASLP 536
+ LS K+ + + + L+ +S ++ + + HV + + H ++P
Sbjct: 464 VHLSEGSFKHLHTFQPQSGTVEAMCLLAVSPDGNWLAASGTSAGVHVYDLHHLKLHCTVP 523
Query: 537 RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQLPV 595
Y P TA+AI P + LV +SD ++ EF + K +T +SR L+ ++ WL R P+
Sbjct: 524 AYNFPVTALAIAPNTNNLVIAHSDQQVFEFSIPEKQYTEWSRSLQKQGFHQLWLQRDTPI 583
Query: 596 LGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPR-LGPKVVSGDSSNSTHVIESK 654
I F P+ I L D C+I+K+ L + + L PK + + + +
Sbjct: 584 THISFHPKRPMHILLHDAYMFCIIDKSLPLPNEKTVLYNPLPPK-----NESDVFLRRTT 638
Query: 655 VAFHFVRRNKHLVYFGSLNDKEMLSVQVNPLS-FMEKLPP 693
F + K L++ L+++ +++V+ PL + +LPP
Sbjct: 639 HGFKMSKIYKPLLFMDLLDERTLVAVE-RPLDDIIAQLPP 677
>FB|FBgn0263605 [details] [associations]
symbol:l(3)72Dn "lethal (3) 72Dn" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294 SMART:SM00320
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:NOG264702
EMBL:AY069620 ProteinModelPortal:Q8T021 SMR:Q8T021 STRING:Q8T021
PaxDb:Q8T021 PRIDE:Q8T021 FlyBase:FBgn0263605 InParanoid:Q8T021
OrthoDB:EOG47SQVX ArrayExpress:Q8T021 Bgee:Q8T021 Uniprot:Q8T021
Length = 696
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 203/718 (28%), Positives = 362/718 (50%)
Query: 1 MSHMCKKR-NTMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETP 59
M++ KK G + VHN++FY +P+ I +A S LA+SRA IE+W++ P
Sbjct: 1 MTNNAKKEPQQRGKHQVHNVRFYTIKPREIVSLAYSKSSKCLALSRATPVIELWNLEHAP 60
Query: 60 HVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSV 119
++DRV I P + +E + W +RLFS L G + E+D+ +L + + T W + V
Sbjct: 61 YLDRV-IHLPTDSHVESIAWAGNRLFSVDLSGKLIEWDVIKLKQRYEHSPTGNALWSIDV 119
Query: 120 HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVR 179
+ + +A G+E+GHIN+ I ++ + Y+ L ++Q+GR+LC + +G LVTG VR
Sbjct: 120 NPAETDIAIGSEEGHINILSIENDEITYKSLFNKQKGRVLCIKFDKTGTKLVTGTEGFVR 179
Query: 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSD 239
+W++ KG +H M+L + KN VW + +D TII GDS GFV WD Q
Sbjct: 180 IWNVLKGTTLHTMTLSE-----KNVIVWSLQVLSDNTIIAGDSAGFVTVWDADNATQIDS 234
Query: 240 VKTHKKDILALTVSEDENYLYCAGVDPTVV-CFQRTRKPQVCSTSGPEQGSSVWVRSVNR 298
+ K++ AL V+ E+ L C+G+ P ++ F +T+ + STS E+ W++ + R
Sbjct: 235 TRVLDKNVFALVVNNKEDRLVCSGMQPPLIRIFSKTKIKREESTS--ER----WIKFLQR 288
Query: 299 VIHEGDVKSLALHGNRXXXXXXXXXXXXXXXPP-KTLVKYPCTLAQSTPVSLAKDIQHVL 357
H+ VKSL + ++ + + + + S+A + +L
Sbjct: 289 DAHKHYVKSLLVIDDQIYSGGRDGILTITSSERMQAHLSQHAPFLKGSVASMAISKKLLL 348
Query: 358 LQYTSHLELWSLGSA--QSTDLSSH----SNTTGVPLLSFP-RLIVKMSAVNNATIRCSV 410
L+Y + + LW LGS Q D T LL P + +++++ + I+ +
Sbjct: 349 LRYPNSVHLWRLGSVAPQGEDKKKPWALPVGHTEEQLLELPPQKLLQLNVKEHNFIQSAA 408
Query: 411 VSNDGKYVAYSTESCVRLHSLDLDGDKPQISR-IKNLPAPLFKSIFTHVLISADSTLLLA 469
+S+D ++ YST +R+ L D Q+ R + +LP L + +H++ + L+L
Sbjct: 409 ISSDANWICYSTLKELRISRLK--SDPLQVERLVDDLPEELQPA--SHIIFTKQGDLVLL 464
Query: 470 VSLNGPL--YIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVV-IW 526
N L + ++ + KY +D S + IS V +S +YIV A H++ +W
Sbjct: 465 NPQNNHLSWFTLEEDLVTFKYTID--LSEKCKNTISHVVISSHGEYIVAAS-SDHIISVW 521
Query: 527 K-NGQ---HHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLET 582
K +G+ H +LPR+R +TA+++H +V Y++ ++VE+DL + FT ET
Sbjct: 522 KLHGKQYKHLLNLPRHRAGTTALSMHEDYPRVVVAYANGQLVEYDLVNRIFTC-----ET 576
Query: 583 NHPNEWL---SRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAK--IPRLGP 637
N E+L +R+ + GI DPQ+ ++ + + L V+ +++ H D K +
Sbjct: 577 N---EYLIPETRRHCINGISLDPQNRNIFIVHTEGNLYVLERDQ---HLDPKELVSNSKS 630
Query: 638 KVVSGDSSNSTHVIESKVAFHFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPPTW 695
K +S + +S ++ +HLV+ L+ E+++V ++ + + LPP +
Sbjct: 631 KKLSNGNRSSVDGGSKGLSLKTTLSRQHLVHVSRLSPNELVNVSISTNNLLAPLPPPY 688
>RGD|1311341 [details] [associations]
symbol:Cirh1a "cirrhosis, autosomal recessive 1A (cirhin)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294
SMART:SM00320 RGD:1311341 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 KO:K14548 CTD:84916
HOVERGEN:HBG050963 OMA:WSRTVQK OrthoDB:EOG4JQ3X0
GeneTree:ENSGT00390000008662 HOGENOM:HOG000095656 EMBL:BC088461
IPI:IPI00363517 RefSeq:NP_001009640.1 UniGene:Rn.106235
Ensembl:ENSRNOT00000027553 GeneID:291987 KEGG:rno:291987
UCSC:RGD:1311341 InParanoid:Q5I0C9 NextBio:633564
Genevestigator:Q5I0C9 Uniprot:Q5I0C9
Length = 686
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 209/700 (29%), Positives = 336/700 (48%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I C+A +S+RLAVSR D ++EI+++S ++ F G
Sbjct: 1 MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHE- 59
Query: 71 SNSIECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129
S E L W RLFS GL G + EYD++ LNIK + G W ++ L G
Sbjct: 60 SRGTEALCWAEGQRLFSAGLNGEILEYDLQALNIKYTLDAFGGPIWSMTASPSGSQLLVG 119
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAI 189
E G + LF+++ + + + + DRQ+ RIL +WH +G ++ G + V+D+ G
Sbjct: 120 CEDGSVKLFEVTPDKIQFARNFDRQKSRILSLSWHPAGTHVAAGSIDYISVFDVKSGSIT 179
Query: 190 HKMSLDKSSK-FSKNTA-VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTH---K 244
KM LD+ +K+ VW VAF +D T+I+ DS G V+ WD TG VK+H
Sbjct: 180 RKMVLDRQHLGVTKSRCIVWGVAFLSDGTVISVDSVGKVQLWDSATGTL---VKSHLIAN 236
Query: 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304
D+ ++ V++ E+ + TV FQ V S S +Q WVR+ H D
Sbjct: 237 ADVQSIAVADQEDSFVVGTAEGTVFHFQLV---SVTSNSSEKQ----WVRTKPFQHHTHD 289
Query: 305 VKSLALHGNRXXXXXXXXXXXXXXXPPKTLVK-YPCTLAQST-P----VSLAKDIQHVLL 358
V+++A K VK Y L + T P +S +K Q +L
Sbjct: 290 VRTVAHSPTALISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLISCSKRRQLLLF 349
Query: 359 QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418
Q+ HLELW LGS +T N +PL ++ + I CS VS G ++
Sbjct: 350 QFAHHLELWRLGSTAATG----KNGDTLPLSKNADHLLHLKTKGPENIICSCVSPCGSWI 405
Query: 419 AYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYI 478
AYST S L+ L + D + R+ LPA L ++ H+L S DST L S G L++
Sbjct: 406 AYSTASRFFLYRLKYERDNISLQRVSKLPAFLRSAL--HILFSEDSTKLFVASNQGSLHV 463
Query: 479 IDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWK--NGQHHASLP 536
I LS K+ + + + L+ +S ++ + + V I+ + + H ++P
Sbjct: 464 IHLSEGSFKHLHTFQPQSGTVEAMCLLAVSPDGNWLAASGTSAGVHIYDLHHLKLHCTVP 523
Query: 537 RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQLPV 595
Y P TA+AI P + LV +SD ++ EF + K +T +SR ++ ++ WL R P+
Sbjct: 524 AYNFPVTALAIAPNTNNLVIAHSDQQVFEFSIPDKQYTEWSRSVQKQGFHQLWLQRDTPI 583
Query: 596 LGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPR-LGPKVVSGDSSNSTHVIESK 654
I P+ I L D C+I+K+ L + + L PK + + + +
Sbjct: 584 THISIHPKRPMHILLHDAYMFCIIDKSLPLPNDKTVLYNPLPPK-----NESDVFLRRTT 638
Query: 655 VAFHFVRRNKHLVYFGSLNDKEMLSVQVNPLS-FMEKLPP 693
F + K L++ L+++ +++V+ PL + +LPP
Sbjct: 639 HGFKMSKIYKPLLFMDLLDERTLVAVE-RPLDDIIAQLPP 677
>UNIPROTKB|E1BC40 [details] [associations]
symbol:CIRH1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR011047
SUPFAM:SSF50998 OMA:WSRTVQK GeneTree:ENSGT00390000008662
EMBL:DAAA02046699 IPI:IPI00685585 Ensembl:ENSBTAT00000008333
Uniprot:E1BC40
Length = 687
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 213/701 (30%), Positives = 331/701 (47%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I C+A +S+RLAVSR D ++EI+++S ++ F G
Sbjct: 1 MGEFNVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHE- 59
Query: 71 SNSIECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129
S + E L W RLFS GL G + EYD++ L IK + G W ++ L G
Sbjct: 60 SRATEALCWAKGQRLFSAGLNGEIIEYDLQALTIKYAVDAFGGPIWSMAASPNASQLLVG 119
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHK-GHA 188
E G + LFQI+ + + +E+ DRQ+ RIL +WH +G ++ G + V+D G A
Sbjct: 120 CEDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHPAGTHVAAGSIDYISVFDSKSAGSA 179
Query: 189 IHKMSLDKSSK-FSKNTAV-WCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKD 246
I KM +D+ SK + W VAF +D T+I+ DS G V+ WD TG + D
Sbjct: 180 IGKMLVDRQYMGVSKRKCIIWGVAFLSDGTVISVDSAGKVQIWDSATGTLVKNHLVSNAD 239
Query: 247 ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306
+ ++ VS E+ + TV FQ V S+S +Q WVR+ H DV+
Sbjct: 240 VQSIAVSPQEDSFVVGTAEGTVFHFQLV---SVTSSSSEKQ----WVRTKPFQHHTHDVR 292
Query: 307 SLALHGNRXXXXXXXXXXXXXXXPPKTLVK-YPCTLAQST-P----VSLAKDIQHVLLQY 360
++A K VK Y L + T P VS AK Q +L Q+
Sbjct: 293 AVAHSPTALISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLVSCAKKKQLLLFQF 352
Query: 361 TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY 420
HLELW LGS +T N +PL ++ + I CS +S G ++A
Sbjct: 353 AHHLELWRLGSTVATG----KNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGGWIAC 408
Query: 421 STESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIID 480
ST S L+ L+ + D + R+ +P L ++ +L S DST L S G L +I
Sbjct: 409 STASRFFLYRLNYEHDNISLQRVSKMPVFLRSAL--QILFSEDSTKLFVASNQGSLRVIR 466
Query: 481 LSSLEIKY--CVDPYKSNLMSDVISLVQMSECKQYIVCADRKS--HVVIWKNGQHHASLP 536
L + P + S + L+ +S ++ + + HV K + H ++P
Sbjct: 467 LQEGGFTHPRAFQPQSGTVQS--MCLLAVSPDGNWLAASGSSAGVHVYNVKQLKLHCTVP 524
Query: 537 RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQLPV 595
Y P TA+AI P + LV +SD ++ E+ + K +T +SR ++ + WL R P+
Sbjct: 525 AYNFPVTALAIAPNTNNLVIAHSDQQVFEYSIPDKQYTEWSRTVQKQGFHHLWLQRDTPI 584
Query: 596 LGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSSNSTHVIESKV 655
I F P+ I L D C+I+K SL + K P +N + VI +
Sbjct: 585 THISFHPKRPMHILLHDTYMFCLIDK--SLPLPNDKTLLYNPL----PPTNESDVIRRRT 638
Query: 656 A--FHFVRRNKHLVYFGSLNDKEMLSVQVNPLS-FMEKLPP 693
A F ++ K L++ L++K +++V+ PL + +LPP
Sbjct: 639 AHAFKISKKYKPLLFVDLLDEKTLVAVE-RPLDDIVAQLPP 678
>SGD|S000002732 [details] [associations]
symbol:UTP4 "Subunit of U3-containing 90S preribosome and SSU
processome" species:4932 "Saccharomyces cerevisiae" [GO:0006364
"rRNA processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IMP] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0034455 "t-UTP
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002732 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:BK006938 GO:GO:0006351 EMBL:U32517 RefSeq:NP_010611.3
GeneID:851924 KEGG:sce:YDR324C KO:K14548 GO:GO:0032040
GeneTree:ENSGT00390000008662 GO:GO:0045943 GO:GO:0000462 KO:K13336
RefSeq:NP_010616.3 GeneID:851929 KEGG:sce:YDR329C GO:GO:0034455
eggNOG:NOG264702 HOGENOM:HOG000246731 OrthoDB:EOG4PG985 PIR:S59790
ProteinModelPortal:Q06679 SMR:Q06679 DIP:DIP-6436N IntAct:Q06679
MINT:MINT-661282 STRING:Q06679 PaxDb:Q06679 PeptideAtlas:Q06679
PRIDE:Q06679 EnsemblFungi:YDR324C CYGD:YDR324c OMA:RLLHTMK
NextBio:969974 Genevestigator:Q06679 GermOnline:YDR324C
Uniprot:Q06679
Length = 776
Score = 421 (153.3 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 160/617 (25%), Positives = 273/617 (44%)
Query: 36 PKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFND-----RLFSGGLQ 90
P RLA+ R++ +IEIW+ + V G SIE L W N RLFS G
Sbjct: 62 PSDLRLAIGRSNGNIEIWNPRNNWFQEMVIEGGK-DRSIEGLCWSNVNGESLRLFSIGGS 120
Query: 91 GFVNEYDMRR-LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-EGLL-Y 147
V E+D+ L +++ SG W +S++ + L+ G + G + L IS G+L +
Sbjct: 121 TVVTEWDLATGLPLRNYDC-NSGVIWSISINDSQDKLSVGCDNGTVVLIDISGGPGVLEH 179
Query: 148 EKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHK-----GHAIHKMSLDKSSKFS 201
+ +L RQ+ R+L AW D+++ GC+ +R+W K G +H M +DK+ K
Sbjct: 180 DTILMRQEARVLTLAWKKD-DFVIGGCSDGRIRIWSAQKNDENMGRLLHTMKVDKAKK-- 236
Query: 202 KNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLY 260
++T VW V + I +GDS G ++FWD + K H D+L LT D NY++
Sbjct: 237 ESTLVWSVIYLPRTDQIASGDSTGSIKFWDFQFATLNQSFKAHDADVLCLTTDTDNNYVF 296
Query: 261 CAGVDPTVVCF-QRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRXXXXX 319
AGVD + F Q T K Q ++ WV S NR++H D++++ + ++
Sbjct: 297 SAGVDRKIFQFSQNTNK---------SQKNNRWVNSSNRLLHGNDIRAICAYQSKGADFL 347
Query: 320 XXXXX-------XXXXXPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSA 372
K P S V + K+ + V+ S +++W++G
Sbjct: 348 VSGGVEKTLVINSLTSFSNGNYRKMPTVEPYSKNVLVNKEQRLVVSWSESTVKIWTMG-- 405
Query: 373 QSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLD 432
TD S+ N +L+ K++ ++ I +S DG+ + S ++ L
Sbjct: 406 --TDSSTEQNY---------KLVCKLTLKDDQNISTCSLSPDGQVLVVGRPSTTKVFHLQ 454
Query: 433 LDGDKPQISRIKN-----LPAPLFKSIFTH--VLISADSTLLLAVSLNGPLYIIDLSSLE 485
G+K +++++ N L K I V+ S + + + V L D E
Sbjct: 455 PVGNKLKVTKLDNDLLLRTSTKLVKFIDNSKIVICSCEDDVFI-VDLESEE---DEKPQE 510
Query: 486 IKYC-VDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHASLPRYRKPSTA 544
++ V KS++ I+ + E Q I R VV + + S P R +
Sbjct: 511 VELLEVTSTKSSIKVPYINRINHLEVDQNIAVISRGCGVVDILDLKARISKPLARLNNFI 570
Query: 545 MAIHPTLS--TLVTVYSDHRIVEFDLN----------RKAFTTFSRKLETNHPNEWLSRQ 592
A+H S ++V + +D++I EF++N T +S+ N P EW + +
Sbjct: 571 TAVHINTSRKSVVVITADNKIYEFNMNLNSEAENEDSESVLTQWSKNNTDNLPKEWKTLK 630
Query: 593 LPVLGIEFDPQDSSLIY 609
+GI D ++SS ++
Sbjct: 631 ENCVGIFSDIENSSRLW 647
Score = 185 (70.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 58/188 (30%), Positives = 91/188 (48%)
Query: 16 VHNIKFYAPEPKVINCIACEPKSS---------RLAVSRADQSIEIWDISETPHVDRVFI 66
VH +F P I +A KS+ RLA+ R++ +IEIW+ + V
Sbjct: 33 VHRCRFVDFTPATITSLAFSHKSNINKLTPSDLRLAIGRSNGNIEIWNPRNNWFQEMVIE 92
Query: 67 GDPLSNSIECLTWFND-----RLFSGGLQGFVNEYDMRR-LNIKSSTAVTSGTCWCLSVH 120
G SIE L W N RLFS G V E+D+ L +++ SG W +S++
Sbjct: 93 GGK-DRSIEGLCWSNVNGESLRLFSIGGSTVVTEWDLATGLPLRNYDC-NSGVIWSISIN 150
Query: 121 KKKRLLAAGTEQGHINLFQISD-EGLL-YEKLLDRQQGRILCTAWHSSGDYLVTGCA-AA 177
+ L+ G + G + L IS G+L ++ +L RQ+ R+L AW D+++ GC+
Sbjct: 151 DSQDKLSVGCDNGTVVLIDISGGPGVLEHDTILMRQEARVLTLAWKKD-DFVIGGCSDGR 209
Query: 178 VRVWDIHK 185
+R+W K
Sbjct: 210 IRIWSAQK 217
Score = 59 (25.8 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 636 GPKVVSGDSSNSTHVIESKVAFHFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEK 690
G K+ S D + ES F F + K L++ ++ E+ ++ NPL+F K
Sbjct: 714 GNKIKSTDVQRNE---ESSGHFFFTDKYKPLLFVDLISSNELAIIERNPLTFHSK 765
>POMBASE|SPBC19F5.02c [details] [associations]
symbol:utp4 "U3 snoRNP protein Utp4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0030490
"maturation of SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding"
evidence=ISO] [GO:0032040 "small-subunit processome" evidence=ISO]
[GO:0034455 "t-UTP complex" evidence=ISO] [GO:0045943 "positive
regulation of transcription from RNA polymerase I promoter"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC19F5.02c Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
EMBL:CU329671 GO:GO:0030515 GO:GO:0006351 GenomeReviews:CU329671_GR
KO:K14548 GO:GO:0032040 GO:GO:0030490 OMA:WSRTVQK GO:GO:0045943
GO:GO:0034455 PIR:T39820 RefSeq:NP_596540.1
ProteinModelPortal:O60161 STRING:O60161 EnsemblFungi:SPBC19F5.02c.1
GeneID:2540514 KEGG:spo:SPBC19F5.02c eggNOG:NOG264702
HOGENOM:HOG000246731 OrthoDB:EOG4PG985 NextBio:20801641
Uniprot:O60161
Length = 710
Score = 300 (110.7 bits), Expect = 4.9e-34, Sum P(2) = 4.9e-34
Identities = 90/313 (28%), Positives = 147/313 (46%)
Query: 16 VHNIKFYAPEPKVINCIACEPKSSR---------LAVSRADQSIEIWDISETPHVDRVFI 66
+H +F P I +A KS + LAV RA +IEIW+ + V
Sbjct: 3 IHRCRFIDYTPSAITAMAFSHKSGQNDSMPNNLLLAVGRASGNIEIWNPRNDWCLKTVLY 62
Query: 67 GDPLSNSIECLTWFND----RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK 122
G + SIE + W RLFS G + E+++ + +G W +++ +
Sbjct: 63 GG-VDRSIEGIVWSTGEEELRLFSIGFSTTITEWNLHTGKPLVNQDSNAGAIWSIAICDE 121
Query: 123 KRLLAAGTEQGHINLFQISD-EGLL-YEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVR 179
+ LA G + G LF IS G++ ++++L RQ RIL + + D+LV GCA ++
Sbjct: 122 TKTLAVGCDDGSCVLFDISGGPGVIEFKRVLMRQTSRILSLDFQTK-DHLVGGCADGVIK 180
Query: 180 VWDIHKGHA--IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQW 237
VWD+ ++ I +M +D++ K + +W V D TI++ DS G V+FW+GK
Sbjct: 181 VWDLSTPNSAIISRMQVDRARK-GEAALIWAVKSLRDGTIVSADSSGAVKFWNGKFFTLS 239
Query: 238 SDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297
K H D L L VS + + ++ +G+D + + R E G WV +
Sbjct: 240 QSFKLHLADALCLGVSANGDMVFSSGIDRKTIQYSR------------EGGKREWVSNSF 287
Query: 298 RVIHEGDVKSLAL 310
R H DV+ +A+
Sbjct: 288 RRFHSHDVRCMAV 300
Score = 150 (57.9 bits), Expect = 4.9e-34, Sum P(2) = 4.9e-34
Identities = 71/324 (21%), Positives = 137/324 (42%)
Query: 393 RLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIK-----NLP 447
R ++K+ + I + +S DG+ +A S+ +L+ L + ++ ++ N+
Sbjct: 371 RFLLKIVLADEENISHAAISPDGELIAISSVLRTKLYQLQYSDENVKVETVEDSFLSNIG 430
Query: 448 APLFKSIFTH---VLISADSTL-LLAVS-LNG-PLYIIDLSSLEIKYCVDPYKSNL--MS 499
A L +L+S DS + L+ +S L+ L + +LS K +SN+ M
Sbjct: 431 ASLLSFTVDKNKLILVSNDSEIFLIELSRLDSRQLEVFELSQPTSKKIAPRQRSNVSSMC 490
Query: 500 DVISLVQMSECKQYIVCADRKSHVVIWK-NGQHHASLPRYRKPSTAMAIHPTL-STLVTV 557
D I + +S Y AD ++ + + ++ LPR AMA P + L
Sbjct: 491 DGICSIAVSSDGDYFAVADTVGNIFCYSLSNLTYSELPRVNTYVRAMAFRPDVRGRLAVA 550
Query: 558 YSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALC 617
+ +++ EFD+ + + +S+ TN P E+ G FD + S ++ + +
Sbjct: 551 TAGNQVYEFDVQSRKLSEWSKNNSTNMPKEFSQLLDKAFGAFFDSKHPSRFWIWSANWVS 610
Query: 618 VINKNKSL----AHADAKIP-------RLGPKVVSGDSSN--STHVIESKVAFHFVRRNK 664
+ N L A KI L K ++ +SN S + F + +
Sbjct: 611 FFDLNLQLPAPRAAGKRKIEMNATVDGNLNDKKLANANSNGISNYGTGDSRCFWITHKYR 670
Query: 665 HLVYFGSLNDKEMLSVQVNPLSFM 688
++ GS+ + E+L V+ P++ M
Sbjct: 671 PMLLVGSVGNSELLVVE-RPIADM 693
>UNIPROTKB|I3LIQ3 [details] [associations]
symbol:CIRH1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 GO:GO:0005730 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 GeneTree:ENSGT00390000008662 EMBL:FP325157
Ensembl:ENSSSCT00000029669 OMA:ITHISFQ Uniprot:I3LIQ3
Length = 372
Score = 351 (128.6 bits), Expect = 3.1e-31, P = 3.1e-31
Identities = 108/356 (30%), Positives = 174/356 (48%)
Query: 347 VSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATI 406
V AK Q +L Q+ HLELW LGS +T H +T +PL ++ + I
Sbjct: 24 VFCAKKKQLLLFQFAHHLELWRLGSTVAT--GKHGDT--LPLSKNADHLLHLKTKGPENI 79
Query: 407 RCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTL 466
CS +S G +VAYST S L+ L+ D D + R+ +PA L ++ H+L S DS+
Sbjct: 80 ICSCISPCGSWVAYSTASRFFLYRLNYDHDSVSLQRVSKMPAFLRSAL--HILFSEDSSK 137
Query: 467 LLAVSLNGPLYIIDL--SSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVV 524
L S G L+II L S + + P + S + L+ +S ++ + + V
Sbjct: 138 LFVASSQGSLHIIRLLEGSFKHLHTFQPQSGTVES--MCLLAVSPDGNWLAASGTSAGVH 195
Query: 525 IWKNGQH---HASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLE 581
++ N +H H ++P Y P TA+AI P + LV +SD ++ E+ + K +T +SR ++
Sbjct: 196 VY-NVKHLKLHCTVPAYNFPVTALAIAPKTNNLVIAHSDQQVFEYSIPDKQYTEWSRTIQ 254
Query: 582 TNHPNE-WLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVV 640
+ WL R P+ I F P+ I L D C+I+K SL + K P
Sbjct: 255 KQGFHHLWLQRDTPITHISFHPKRPMHILLHDAYMFCIIDK--SLPLPNDKTLLYNPL-- 310
Query: 641 SGDSSNSTHVIESKVA--FHFVRRNKHLVYFGSLNDKEMLSVQVNPLS-FMEKLPP 693
+N + VI + A F + K L++ L++K +++V+ PL + +LPP
Sbjct: 311 --PPTNESDVIRRRTAHAFKISKIYKPLLFMDLLDEKTLVAVE-RPLDDIIAQLPP 363
>TAIR|locus:2124377 [details] [associations]
symbol:PCN "AT4G07410" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IMP] [GO:0010311 "lateral root formation" evidence=IMP]
[GO:0010449 "root meristem growth" evidence=IMP] [GO:0035266
"meristem growth" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] [GO:0048569 "post-embryonic organ development"
evidence=IGI] [GO:2000012 "regulation of auxin polar transport"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0009790 GO:GO:0010449
GO:GO:0010311 GO:GO:0048366 GO:GO:0010073 GO:GO:0010305 KO:K14548
OMA:WSRTVQK GO:GO:2000012 EMBL:AY080667 EMBL:AY133764
IPI:IPI00543987 RefSeq:NP_567317.2 UniGene:At.21924
ProteinModelPortal:Q8RXU6 SMR:Q8RXU6 STRING:Q8RXU6 PRIDE:Q8RXU6
EnsemblPlants:AT4G07410.1 GeneID:826172 KEGG:ath:AT4G07410
TAIR:At4g07410 HOGENOM:HOG000015194 InParanoid:Q8RXU6
PhylomeDB:Q8RXU6 ProtClustDB:CLSN2690282 Genevestigator:Q8RXU6
Uniprot:Q8RXU6
Length = 815
Score = 216 (81.1 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 75/314 (23%), Positives = 127/314 (40%)
Query: 12 GTYGVH-NIKFYAPEPKVINCIA--CEPK----SSRLAVSRADQSIEIWDISETPHVDRV 64
G G H + + I+ +A C P S RL S D SI WD+ + + +
Sbjct: 45 GAVGWHCQLTIHGDPNSRISSLAWCCSPSIGLPSGRLFSSSIDGSISEWDLFD---LKQK 101
Query: 65 FIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKK- 123
+ + + SI + FS ++G N Y + N + H+K
Sbjct: 102 IVLESIGISIWQMALAPISGFSSDVEGIKNGYLSEKSNDEEEIGSEEDGSDSDEFHEKSE 161
Query: 124 ----RLLAAGTEQGHINLFQISD-EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AA 177
R+LAA + G + L++IS+ E L Y + L R GR L W + +G +
Sbjct: 162 EEIDRILAAACDDGCVRLYRISNLEKLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGL 221
Query: 178 VRVWDIHKGHAIHKMSLDKSSKFSKNT-AVWCVAFCADFTIITGDSGGFVRFWDGKTGVQ 236
+R WD H +++++ S + VW + +++GDS G V+FWD + G
Sbjct: 222 IRCWDATSCHEVYRITAGLGGLGSSSEICVWSLLSLRCSVLVSGDSTGTVQFWDSEHGTL 281
Query: 237 WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSV 296
HK D+ L + N ++ AG D V+ ++ + P S W
Sbjct: 282 LEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILYKLSGSTNGSQDLKPSS-SQKWDYIG 340
Query: 297 NRVIHEGDVKSLAL 310
H D+++L +
Sbjct: 341 YVKAHTHDIRALTV 354
Score = 141 (54.7 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 68/301 (22%), Positives = 129/301 (42%)
Query: 339 CTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKM 398
C Q P+ + + + + TS L + + + L+ S+++G + + +V++
Sbjct: 425 CPAPQRIPMQM---VHNSMFNKTSLLLVQGISTLDILRLNISSDSSG---RASTKSLVRV 478
Query: 399 SAVNNATIRCSVVSNDGKYVAYSTE---SCVRLHSLDLDGDKPQISRIKNLPAPLFKSIF 455
+ + I CS +SN G + AYS + S L + +SR + LP + F
Sbjct: 479 KSRDARKIICSAISNTGSHFAYSDQIGPSLFELKKNEFTKCPWSVSR-RRLP----ELPF 533
Query: 456 THVLI-SADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDV-------ISLVQM 507
H +I S+D + L+ + +Y ID+SSLE+ Y P + + I+ +
Sbjct: 534 AHSMIFSSDCSRLIIAGHDRRIYTIDISSLELVYAFTPSREEHEGEAPTPKEPPITKLFT 593
Query: 508 SECKQYIVCADRKSHVVIW--KNGQHHASLPRYRKPS-TAMAIHP-TLSTLVTVYSDHRI 563
S Q++ + + ++ + + H + R S TA HP + LV S +++
Sbjct: 594 SSDGQWLAAINCFGDIYVFNLETQRQHWFISRLDGASVTAAGFHPWNNNALVISTSSNQV 653
Query: 564 VEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQ-DSSLIYLMDDSALCVINKN 622
FD+ + +S P + VLG+ F P +SS + + A C+I+
Sbjct: 654 FAFDVEARQLGKWSLLNTYVLPKRYQEFPGEVLGLSFSPSPNSSSVIVYSSRAKCLIDFG 713
Query: 623 K 623
K
Sbjct: 714 K 714
Score = 97 (39.2 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 53/226 (23%), Positives = 93/226 (41%)
Query: 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETP---HVDRVFIGDPLSNSIECLTWF- 80
+P + +A S++A +R D S+EIW +S H GDP S I L W
Sbjct: 12 KPSPVVALANSSDDSQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSR-ISSLAWCC 70
Query: 81 -------NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLA--AGTE 131
+ RLFS + G ++E+D+ L K + W +++ + G +
Sbjct: 71 SPSIGLPSGRLFSSSIDGSISEWDLFDLKQKIVLESIGISIWQMALAPISGFSSDVEGIK 130
Query: 132 QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD-----YLVTGCA-AAVRVWDIHK 185
G+++ + +DE E++ + G +H + L C VR++ I
Sbjct: 131 NGYLSE-KSNDE----EEIGSEEDGSD-SDEFHEKSEEEIDRILAAACDDGCVRLYRISN 184
Query: 186 GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWD 230
+ K++ +S A+ V + D I +G S G +R WD
Sbjct: 185 ---LEKLTYYRSLPRVSGRAL-SVTWSPDAKRIFSGSSDGLIRCWD 226
Score = 47 (21.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 28/96 (29%), Positives = 40/96 (41%)
Query: 170 LVTG-CAAAVRVWDIHKG-----HAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGD-S 222
LV+G V+ WD G H+ HK ++ + + V+ AD +I S
Sbjct: 262 LVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAG--ADGQVILYKLS 319
Query: 223 GGFVRFWDGK--TGVQWSD---VKTHKKDILALTVS 253
G D K + +W VK H DI ALTV+
Sbjct: 320 GSTNGSQDLKPSSSQKWDYIGYVKAHTHDIRALTVA 355
>CGD|CAL0006401 [details] [associations]
symbol:UTP4 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0005819 "spindle" evidence=IEA]
[GO:0034455 "t-UTP complex" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0006401 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:AACQ01000014
EMBL:AACQ01000013 KO:K14548 GO:GO:0032040 eggNOG:NOG264702
RefSeq:XP_721590.1 RefSeq:XP_721710.1 ProteinModelPortal:Q5AJF9
STRING:Q5AJF9 GeneID:3636657 GeneID:3636785 KEGG:cal:CaO19.1633
KEGG:cal:CaO19.9201 Uniprot:Q5AJF9
Length = 743
Score = 292 (107.8 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 140/588 (23%), Positives = 244/588 (41%)
Query: 40 RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTW-FND-------RLFSGGLQG 91
RLAV R++ IEIW+ + G SIE L W +N+ RLFS G
Sbjct: 36 RLAVGRSNGDIEIWNPRHNWTHELTLPGSK-GRSIEGLCWSYNEQDPLEPPRLFSIGGST 94
Query: 92 FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-EGLL-YEK 149
++ E+D+ + +G WC+ ++ + L G + G + + IS G L Y+
Sbjct: 95 YITEWDLSTGRPLINYDCNAGIIWCIDINPQNDRLTVGCDDGSVVIVDISGGRGSLEYDL 154
Query: 150 LLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIH---KGHAIHKMSLDKSSKFSKNTA 205
+ RQ R+L W ++ ++++ GCA +R W KG + M +DK+ +++T
Sbjct: 155 ICQRQDARVLSVKW-ANNEHVIGGCADGRIRSWSSEGETKGRLVATMKVDKAK--TESTL 211
Query: 206 VWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGV 264
VW + + ++GDS G ++ WD K H D+L L E ++ AGV
Sbjct: 212 VWSLTVLPNKKQFVSGDSTGSIKIWDLTRFTLLQTFKIHDADVLCLVHDVKEEKIFSAGV 271
Query: 265 DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRXXXXXXXXXX 324
D + F + SS W S NR++H DV+SLA+ N+
Sbjct: 272 DRKIHQFDLLNS----------KNSSKWTHSFNRLLHSNDVRSLAIFENKNYNLLVSGGV 321
Query: 325 XXXXXPP--KTLV--KYPCTLA--QSTPVSLAKDIQHVLLQYTSHLELWSL---GS---A 372
+T KY L Q + + + D + V+L +++W + G
Sbjct: 322 ERAIVVQNIETFYDGKYKKLLINQQQSNILIVPDSKLVILWQDQTIKIWKVLPDGKHVLM 381
Query: 373 QSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLD 432
LS+ N T V ++ KM++V + +S D K+ + SL
Sbjct: 382 SKLTLSADENITSVDFKDNLLVVAKMTSVR--FFELTEIS-DNKFKIQKIRDD-KFDSL- 436
Query: 433 LDGDK--PQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKYCV 490
++G K I K L + ++T + S + + LNG + +++ S + +
Sbjct: 437 VEGAKIVKFIDANKVLILTPDEELYTFDIDSDEGK----IELNGEIELLE--STQQQQQQ 490
Query: 491 DPYKSNLMSDVISLVQMSECKQYIVCADRKS-HVVIWKNGQHHAS-LPRYRK-PSTAMAI 547
K+ + + +LV KQ I+ S V N + A L + P +
Sbjct: 491 QQRKNQHLLRINNLVLTPNKKQIIISRFNGSIEVYPIVNTETEAYVLTKLSSYPHLIECV 550
Query: 548 HPTLSTLVTVYSDHRIVEFDLNRK---AFTTFSRKLETNHPNEWLSRQ 592
+ LV + +++I EF +N K T +S++ P +++S Q
Sbjct: 551 ND--EKLVVINEENKIFEFFINDKDGQLLTPWSKRNSEFLPRQFISLQ 596
>UNIPROTKB|Q5AJF9 [details] [associations]
symbol:CaO19.1633 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0006401 Gene3D:2.130.10.10 SUPFAM:SSF50978
EMBL:AACQ01000014 EMBL:AACQ01000013 KO:K14548 GO:GO:0032040
eggNOG:NOG264702 RefSeq:XP_721590.1 RefSeq:XP_721710.1
ProteinModelPortal:Q5AJF9 STRING:Q5AJF9 GeneID:3636657
GeneID:3636785 KEGG:cal:CaO19.1633 KEGG:cal:CaO19.9201
Uniprot:Q5AJF9
Length = 743
Score = 292 (107.8 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 140/588 (23%), Positives = 244/588 (41%)
Query: 40 RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTW-FND-------RLFSGGLQG 91
RLAV R++ IEIW+ + G SIE L W +N+ RLFS G
Sbjct: 36 RLAVGRSNGDIEIWNPRHNWTHELTLPGSK-GRSIEGLCWSYNEQDPLEPPRLFSIGGST 94
Query: 92 FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-EGLL-YEK 149
++ E+D+ + +G WC+ ++ + L G + G + + IS G L Y+
Sbjct: 95 YITEWDLSTGRPLINYDCNAGIIWCIDINPQNDRLTVGCDDGSVVIVDISGGRGSLEYDL 154
Query: 150 LLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIH---KGHAIHKMSLDKSSKFSKNTA 205
+ RQ R+L W ++ ++++ GCA +R W KG + M +DK+ +++T
Sbjct: 155 ICQRQDARVLSVKW-ANNEHVIGGCADGRIRSWSSEGETKGRLVATMKVDKAK--TESTL 211
Query: 206 VWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGV 264
VW + + ++GDS G ++ WD K H D+L L E ++ AGV
Sbjct: 212 VWSLTVLPNKKQFVSGDSTGSIKIWDLTRFTLLQTFKIHDADVLCLVHDVKEEKIFSAGV 271
Query: 265 DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRXXXXXXXXXX 324
D + F + SS W S NR++H DV+SLA+ N+
Sbjct: 272 DRKIHQFDLLNS----------KNSSKWTHSFNRLLHSNDVRSLAIFENKNYNLLVSGGV 321
Query: 325 XXXXXPP--KTLV--KYPCTLA--QSTPVSLAKDIQHVLLQYTSHLELWSL---GS---A 372
+T KY L Q + + + D + V+L +++W + G
Sbjct: 322 ERAIVVQNIETFYDGKYKKLLINQQQSNILIVPDSKLVILWQDQTIKIWKVLPDGKHVLM 381
Query: 373 QSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLD 432
LS+ N T V ++ KM++V + +S D K+ + SL
Sbjct: 382 SKLTLSADENITSVDFKDNLLVVAKMTSVR--FFELTEIS-DNKFKIQKIRDD-KFDSL- 436
Query: 433 LDGDK--PQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKYCV 490
++G K I K L + ++T + S + + LNG + +++ S + +
Sbjct: 437 VEGAKIVKFIDANKVLILTPDEELYTFDIDSDEGK----IELNGEIELLE--STQQQQQQ 490
Query: 491 DPYKSNLMSDVISLVQMSECKQYIVCADRKS-HVVIWKNGQHHAS-LPRYRK-PSTAMAI 547
K+ + + +LV KQ I+ S V N + A L + P +
Sbjct: 491 QQRKNQHLLRINNLVLTPNKKQIIISRFNGSIEVYPIVNTETEAYVLTKLSSYPHLIECV 550
Query: 548 HPTLSTLVTVYSDHRIVEFDLNRK---AFTTFSRKLETNHPNEWLSRQ 592
+ LV + +++I EF +N K T +S++ P +++S Q
Sbjct: 551 ND--EKLVVINEENKIFEFFINDKDGQLLTPWSKRNSEFLPRQFISLQ 596
>ASPGD|ASPL0000010371 [details] [associations]
symbol:AN3794 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000061 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030529
KO:K14548 eggNOG:NOG264702 OrthoDB:EOG4PG985 RefSeq:XP_661398.1
ProteinModelPortal:Q5B6N6 STRING:Q5B6N6
EnsemblFungi:CADANIAT00004920 GeneID:2873219 KEGG:ani:AN3794.2
HOGENOM:HOG000183346 OMA:IHRCRFV Uniprot:Q5B6N6
Length = 938
Score = 246 (91.7 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 100/365 (27%), Positives = 156/365 (42%)
Query: 126 LAAGTEQGHINLFQISDEGLLYEKLL--DRQQGRILCTAWHSSGDYLVTGCA-AAVRVWD 182
LAAG G I L +D+ L + + L ++ R+L + + +V G A +++RV+D
Sbjct: 160 LAAGCADGSIVLLSTADDDLKFLRTLRPSTKKPRVLSVTFQNRNT-IVAGYADSSIRVFD 218
Query: 183 IHKGHAIHKMSLDKS-SKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK 241
I G + +SL K + SK VW V D TI++GDS G VRFWD K ++
Sbjct: 219 IRNGQLLRTISLGKGPTGGSKELLVWSVKCLPDGTIVSGDSAGEVRFWDAKNYSLIQRLQ 278
Query: 242 THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH 301
H D L + VS D + G D V +++ G + SS WV +R H
Sbjct: 279 GHLADTLDVAVSADGETVVSGGADQRTVVYRKK-----AGEKGDK--SSRWVEVTHRRYH 331
Query: 302 EGDVKSLALHG--NRXXXXXXXXXXXXXXXPPKTLVK-----YPCTLAQSTPVSLAKDIQ 354
DVK+ A++ N P + K P +L Q PV A +
Sbjct: 332 THDVKTFAVYETKNLSVVVSGGPDAHPVVLPLREFGKEHHRNLP-SLPQVPPVVSAPSSR 390
Query: 355 HVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSND 414
V+ + + +W + + S H VP RL+ K+ I + +S D
Sbjct: 391 LVMSFWDREVNIWRVSRGPT---SVHE----VPDGQRHRLVGKVLIQGEENITSAALSTD 443
Query: 415 GKYVAYSTESCVRLHSLDL-DGDKPQISRIKNL--PAPLFKSIFTHVLISADSTLLLAVS 471
GK + +T S +++ S+ GD+ R + + PA + + V IS DS L V
Sbjct: 444 GKVLIIATISSIKIFSVRRRKGDERGALRAQKIDTPASISEDGARFVTISPDSRWLCIVR 503
Query: 472 LNGPL 476
N +
Sbjct: 504 PNSDI 508
Score = 90 (36.7 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 37/134 (27%), Positives = 52/134 (38%)
Query: 16 VHNIKFYAPEPKVINCIA-CEPKSS----------RLAVSRADQSIEIWDISETPHVDRV 64
+H +F P+ IN +A P S RLAV RA+ IEIW+ +
Sbjct: 3 IHRCRFVPYNPQAINALAFSHPPSIGLGGKGVPTLRLAVGRANGDIEIWNPARGAWFQET 62
Query: 65 FIGDPLSNSIECLTWFND----------------RLFSGGLQGFVNEYDMRRLNIKSSTA 108
+ SIE L W D RLFS G V E+D+ + K ++
Sbjct: 63 VLRGGKDRSIEGLAWTLDPPEPGPDGQQKQAGRLRLFSIGYSTTVTEWDLEQGRPKRHSS 122
Query: 109 VTSGTCWCLSVHKK 122
G WCL+ +
Sbjct: 123 GNYGEMWCLAAQPR 136
Score = 48 (22.0 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 540 KPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNH-PNEWLSRQLPVLGI 598
K TA + S L+ + ++H++VE D + +SR+ P+++ + +G
Sbjct: 650 KDGTATNVDSE-SRLMALTAEHQLVELDALEGKLSEWSRRNPKAFLPSDFKGVKDRAMGC 708
Query: 599 EFDPQDSS 606
+D DSS
Sbjct: 709 LWDLSDSS 716
>TAIR|locus:2015909 [details] [associations]
symbol:AT1G27470 "AT1G27470" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
KO:K14548 eggNOG:NOG264702 HOGENOM:HOG000015194 EMBL:AY070059
EMBL:AY150459 IPI:IPI00533570 RefSeq:NP_174067.2 UniGene:At.28415
ProteinModelPortal:Q8VYS4 SMR:Q8VYS4 PaxDb:Q8VYS4 PRIDE:Q8VYS4
EnsemblPlants:AT1G27470.1 GeneID:839638 KEGG:ath:AT1G27470
TAIR:At1g27470 InParanoid:Q8VYS4 OMA:FAHSMVF PhylomeDB:Q8VYS4
ArrayExpress:Q8VYS4 Genevestigator:Q8VYS4 Uniprot:Q8VYS4
Length = 810
Score = 187 (70.9 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 41/152 (26%), Positives = 74/152 (48%)
Query: 124 RLLAAGTEQGHINLFQISD-EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVW 181
R LAA + G + ++ IS+ + L Y + L R GR L W + + +G + +R W
Sbjct: 166 RHLAAACDDGCVRIYYISESDKLTYYRSLPRVTGRALSVTWSADAQRIFSGSSDGLIRCW 225
Query: 182 DIHKGHAIHKMSLDKSSKFS-KNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDV 240
D + H ++++++ + +W + +++GDS G V+FWD + G
Sbjct: 226 DANLCHEVYRITVGLGGLGNGSELCIWSLLSLRYGVLVSGDSTGSVQFWDSQHGTLLQAH 285
Query: 241 KTHKKDILALTVSEDENYLYCAGVDPTVVCFQ 272
HK D+ AL S N ++ AG D V+ ++
Sbjct: 286 SNHKGDVNALAASPSHNRVFSAGADGQVILYK 317
Score = 123 (48.4 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 63/300 (21%), Positives = 123/300 (41%)
Query: 339 CTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSH-SNTTGVPLLSFPRLIVK 397
C Q P+ + + + + TS L + S L H SN + + + P +V+
Sbjct: 423 CPAPQRVPMQM---VHNTVFNQTSLLLVQD--SCSLDILRIHISNDSSGRVSTKP--LVR 475
Query: 398 MSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLD--GDKPQISRIKNLPAPLFKSIF 455
+ + + I CS +SN G AYS + L L + G P + K LP F
Sbjct: 476 VKSKDARKIICSAISNTGSLFAYSDQVRPSLFELKKNKIGKNPWSANRKRLP----NLPF 531
Query: 456 THVLI-SADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDV------ISLVQMS 508
H ++ S D + L+ + +YI+D+ S+E+ + P + + I+ + S
Sbjct: 532 AHSMVFSCDCSRLIIAGHDRRIYIVDVGSMELLHSFTPRQEGQEGESPPHEPPITKLYTS 591
Query: 509 ECKQYIVCADRKSHVVIW--KNGQHHASLPRYRKPSTAMA-IHPTLSTLVTVY-SDHRIV 564
++ + + ++ + + H + R S A A HP + ++ + S +++
Sbjct: 592 SNDDWLAAINCFGDIYVFNLETQRQHWFISRLDGASVAAAGFHPRDNNVIVISTSSNQVF 651
Query: 565 EFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQD-SSLIYLMDDSALCVINKNK 623
D+ + + +S P + + V+G+ F P SS + + A C+I K
Sbjct: 652 ALDVEARELSKWSLLQTFCLPKSYQNFPGEVVGLSFSPSPCSSSVIIYSSRAKCLIEFGK 711
Score = 115 (45.5 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 57/229 (24%), Positives = 97/229 (42%)
Query: 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDIS---ETPHVDRVFIGDPLSNSIECLTWFN 81
+P + +A S++A +R D S+E+W +S + H + GDP S I L WF
Sbjct: 12 KPSPVVALATSADGSQVAAAREDGSLELWLVSPGASSWHCQLIIHGDPKSR-ISHLAWFG 70
Query: 82 D--------RLFSGGLQGFVNEYDMRRLNIKSSTAVTS-G-TCWCLSVHKKKRLLAAGTE 131
RLFS + G ++E+D+ ++K + S G + W +++ ++ E
Sbjct: 71 TGSKGSSSARLFSSSIDGSISEWDL--FDLKQKVVLDSIGFSIWQIALAP----ISIEAE 124
Query: 132 QGHINLFQISDEGLLYEKLLDRQQGRI--------LCTAWHSSGDYLVTGCA-AAVRVWD 182
L Q G L EK D ++ + L + +L C VR++
Sbjct: 125 SKEAKLIQ---NGYLSEKSDDEEESGVEDDSELDELDEKVEALDRHLAAACDDGCVRIYY 181
Query: 183 IHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWD 230
I + K++ +S A+ V + AD I +G S G +R WD
Sbjct: 182 ISESD---KLTYYRSLPRVTGRAL-SVTWSADAQRIFSGSSDGLIRCWD 226
Score = 63 (27.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 30/133 (22%), Positives = 54/133 (40%)
Query: 19 IKFYAPEPKVIN---CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIG-DPLSNSI 74
+ +Y P+V + + R+ +D I WD + V R+ +G L N
Sbjct: 188 LTYYRSLPRVTGRALSVTWSADAQRIFSGSSDGLIRCWDANLCHEVYRITVGLGGLGNGS 247
Query: 75 ECLTW--FNDR---LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK-KRLLAA 128
E W + R L SG G V +D + + + + G L+ R+ +A
Sbjct: 248 ELCIWSLLSLRYGVLVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSA 307
Query: 129 GTEQGHINLFQIS 141
G + G + L+++S
Sbjct: 308 GAD-GQVILYKLS 319
Score = 60 (26.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 29/96 (30%), Positives = 43/96 (44%)
Query: 170 LVTG-CAAAVRVWDIHKG-----HAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGD-S 222
LV+G +V+ WD G H+ HK ++ + + V+ AD +I S
Sbjct: 262 LVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAG--ADGQVILYKLS 319
Query: 223 GGFVRFWDGK--TGVQWSD---VKTHKKDILALTVS 253
GG R D K + +W V+ H DI ALTV+
Sbjct: 320 GGTSRSQDFKPSSAQKWDYIGCVRAHTHDIRALTVA 355
>WB|WBGene00021276 [details] [associations]
symbol:Y23H5B.5 species:6239 "Caenorhabditis elegans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0040035 GO:GO:0006364 GeneTree:ENSGT00390000004228 KO:K14549
EMBL:FO080963 OMA:ADTAYGV RefSeq:NP_490990.2
ProteinModelPortal:Q9N477 SMR:Q9N477 STRING:Q9N477 PaxDb:Q9N477
EnsemblMetazoa:Y23H5B.5 GeneID:171811 KEGG:cel:CELE_Y23H5B.5
UCSC:Y23H5B.5 CTD:171811 WormBase:Y23H5B.5 HOGENOM:HOG000017269
InParanoid:Q9N477 NextBio:872795 Uniprot:Q9N477
Length = 561
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 70/300 (23%), Positives = 128/300 (42%)
Query: 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFND-R 83
EP V++ + PK + + + ++D T + + + + + + +D R
Sbjct: 39 EPAVVSSVRISPKKPYHVATTSSVRLTLYD---TVVCEPLNLFSRFKKGVCSIDFRHDGR 95
Query: 84 LFS-GGLQGFVNEYDMRRLNIKSSTAVT---SGTCWCLSVHKKKR--LLAAGTEQGHINL 137
L + GG +G V +D+ + S A+ + SVH R + + + G I
Sbjct: 96 LLAIGGDEGKVRIFDVEKTTGSSKVALRVMQASQSTVKSVHFSPRGDTVFSMADDGKIKQ 155
Query: 138 FQISDE--GLLYEKLLDRQ--QGRILCTAWHSSGDYLVT--GCAAAVRVWDIHKGHAIHK 191
++++D G+ +++ Q + I C A S D++V G VR+WDI
Sbjct: 156 YRVADTAYGVNAVPIIEIQAHEDAIRCGAVSSINDHIVLTGGYDHKVRLWDIR------- 208
Query: 192 MSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALT 251
S +KS + V V F +I +G V+ WD TG Q + ++ H K + +L
Sbjct: 209 -SKEKSLELDCEHPVESVLFLPGEQLIATAAGPIVKIWDTTTGRQLTALQAHYKTVTSLR 267
Query: 252 VSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH 311
++ + L AG+D V F+ T + S S P + V ++ + G LAL+
Sbjct: 268 LATNSTCLLSAGIDRRVNAFRTTNYSLINSWSMPSPVLDIDVSRDDQTMAIGMGNLLALY 327
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 151 (58.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 63/308 (20%), Positives = 129/308 (41%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRA-DQSIEIWDISETPHVDRVFIGDP 69
M T + ++ + +NC+ KSSR+ V+ D + +W I + P+ G
Sbjct: 1 MNTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLYGH- 58
Query: 70 LSNSIECLTW-FNDRLFSGGL-QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLA 127
S+ I+ +T+ ++ L + G G + +D+ + + C ++ H A
Sbjct: 59 -SSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFA 117
Query: 128 AGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKG 186
+G+ ++ ++ I +G ++ + +L + G ++V+G V+VWD+ G
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL--RFTPDGRWIVSGGEDNVVKVWDLTAG 175
Query: 187 HAIHKMSLDKSSKFSKNTAVWCVAFCA-DFTIITGDSGGFVRFWDGKTGVQWSDVKTHKK 245
+H+ S + + F +F + TG + V+FWD +T T
Sbjct: 176 KLLHEFK-------SHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETT 228
Query: 246 DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDV 305
+ LT + D + C G+ ++ F + +P C G + G W + +HEG +
Sbjct: 229 GVRCLTFNPDGKSVLC-GLQESLKIF--SWEPIRCH-DGVDVG---WSNLSDMNVHEGKL 281
Query: 306 KSLALHGN 313
+ + N
Sbjct: 282 LGCSYNQN 289
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/217 (24%), Positives = 96/217 (44%)
Query: 84 LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSV-HKKKRLLAAGTEQGHINLFQISD 142
LF+GG V +D + S + G ++V H K ++AA T ++ ++ +S
Sbjct: 240 LFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAA-TSSNNLFVWDVSS 298
Query: 143 EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFS 201
G + L S ++V+ +++WD+HKG+ + + F+
Sbjct: 299 -GRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVL------FT 351
Query: 202 KNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC 261
N C++ T+ +G G +R WD +TG S+V H + ++++S + N +
Sbjct: 352 SNCNAICLSIDG-LTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILT 410
Query: 262 AGVDPTVVCFQRTRKPQVCST---SGPEQGSSVWVRS 295
+G D F TR ++C T SG S+ W RS
Sbjct: 411 SGRDNVHNVFD-TRTLEICGTLRASGNRLASN-WSRS 445
>WB|WBGene00010582 [details] [associations]
symbol:K05C4.5 species:6239 "Caenorhabditis elegans"
[GO:0008152 "metabolic process" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR015943
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0008152 InterPro:IPR011047
SUPFAM:SSF50998 EMBL:Z81564 eggNOG:NOG264702 RefSeq:NP_493567.2
ProteinModelPortal:Q9XUU8 SMR:Q9XUU8 PaxDb:Q9XUU8
EnsemblMetazoa:K05C4.5.1 EnsemblMetazoa:K05C4.5.2 GeneID:173339
KEGG:cel:CELE_K05C4.5 UCSC:K05C4.5 CTD:173339 WormBase:K05C4.5
HOGENOM:HOG000021707 InParanoid:Q9XUU8 OMA:RRDPTIA Uniprot:Q9XUU8
Length = 686
Score = 141 (54.7 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 61/251 (24%), Positives = 102/251 (40%)
Query: 32 IACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL------SNSIECLTWF-NDRL 84
IA + S ++A+ R +S E D E ++ ++ P + SIE L + N L
Sbjct: 22 IAIDENSGKMAIVRKSRSSETHDYIEFYNILSSWLAIPELTVCPENGSIEHLLFVDNGEL 81
Query: 85 FSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEG 144
S G V D + +++ T W H + + A + + F +S +
Sbjct: 82 MSSHANGSVCFIDPHNIERIKRIQISASTIWAACKHTENTI-AMISHSSVLYFFDVSTKM 140
Query: 145 LLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNT 204
++ L + R+ + S+G + G V + G + LD+ ++ T
Sbjct: 141 IISSISLG-VESRLFDVS--SNGTIVAIGSIDGVII--AGDGKVQQTLKLDRLNRRDP-T 194
Query: 205 AVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGV 264
W V F + GDS G V FW+ G + + ILA+ VS D + L AGV
Sbjct: 195 IAWSVLFVKPSLLACGDSRGTVTFWNPIDGSLIQSISCLQSHILAM-VSTDNSTLNIAGV 253
Query: 265 DPTVVCFQRTR 275
DP + + TR
Sbjct: 254 DPRITELRETR 264
Score = 47 (21.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 459 LISADSTLLLAVSLNGPLYIIDLSSLEIKYCVD-PYKSN 496
LI DS ++ S +G I+D+ S + D P K+N
Sbjct: 570 LIGIDSNKIMTASYDGHWSILDVESGTVVSAQDGPLKAN 608
Score = 38 (18.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 542 STAMAIHPTLSTLVTVYSDHRIVEFDL 568
+T+++I L V SD ++EFDL
Sbjct: 418 ATSLSITKNLRFYVAK-SDFEVLEFDL 443
>DICTYBASE|DDB_G0293462 [details] [associations]
symbol:cirh1a "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0030515 "snoRNA binding"
evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 SMART:SM00320 dictyBase:DDB_G0293462
GenomeReviews:CM000155_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0030515 eggNOG:COG2319 EMBL:AAFI02000211 KO:K14548
GO:GO:0006364 GO:GO:0005732 RefSeq:XP_629130.2
ProteinModelPortal:Q54BS1 EnsemblProtists:DDB0237543 GeneID:8629238
KEGG:ddi:DDB_G0293462 OMA:IKCLEIT Uniprot:Q54BS1
Length = 462
Score = 138 (53.6 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 71/371 (19%), Positives = 150/371 (40%)
Query: 16 VHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVD-RVFIGDPLSNSI 74
VH+ F + PK I I+ +++ +AVSR + +EIW ++ + + G I
Sbjct: 77 VHHCSFSSWLPKPITSISYNQENNLIAVSRQESPLEIWIKNDQELILLKTLGGSKFDLPI 136
Query: 75 ECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGH 134
+ W N + + +D+ +I + GT +S ++ LLA T +
Sbjct: 137 ISVIWLNKTILLSTFENKFVIWDISSYSIIQELN-SIGTVRGVSFNRLLNLLAVCTHDSN 195
Query: 135 INL--FQISDEGLLYEKLLDR-QQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHK 191
+ L F+ D + Y+ +I W ++ GC + V+ +
Sbjct: 196 VRLYNFKKDDNEIEYQSSFPSVSDSKINTIQWALDQKTILVGCQNQLVVFKVD------- 248
Query: 192 MSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALT 251
SL S + + V + D T+ G + GF+ D K G D + + ++
Sbjct: 249 -SLRSSLTITTDNIV-SLNSLNDNTVACGFTNGFISIIDIKFGSIIQDFRNLHAPVRSIQ 306
Query: 252 VSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN----RVIHEGDVKS 307
V++ + + +G + T+V + ++ + SG + S ++ + +I G+
Sbjct: 307 VNKKGDQFFASGDEATIVSYNKSSGNNKWAFSGQHKRDSHDIKCLEITNTHLISGGNSTQ 366
Query: 308 LALHG-NRXXXXXXXXXXXXXXXPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSH-LE 365
+ + + K+L P T+A + P S +++ Q +L++++ + +
Sbjct: 367 MIFYDLSNFSSLSNSNGSIPNYFRCKSL-PLPNTIAITQPSSSSQN-QILLIEFSRYQIN 424
Query: 366 LWSLGSAQSTD 376
+W LGS +
Sbjct: 425 IWQLGSTNDNN 435
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 140 (54.3 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 34/112 (30%), Positives = 57/112 (50%)
Query: 160 CTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTA-VWCVAFCAD-FT 216
C +H + Y++TG + R+WD+H+GH++ F+ +T V VA D T
Sbjct: 468 CVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRV--------FNGHTQPVTAVAIAPDGHT 519
Query: 217 IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268
+ + DS G + WD TG + ++ H+ +I +L+ S + L G D TV
Sbjct: 520 MASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTV 571
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 138 (53.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 56/235 (23%), Positives = 102/235 (43%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFS 86
I + P LA D+ I IWD+S T + ++ G I L +F DRL S
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLS-TKRIIKILRGH--EQDIYSLDFFPDGDRLVS 314
Query: 87 GGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146
G V +D+R + ++ G ++V +L+AAG+ + ++ S G L
Sbjct: 315 GSGDRSVRIWDLRTSQCSLTLSIEDGVT-TVAVSPDGKLIAAGSLDRTVRVWD-STTGFL 372
Query: 147 YEKL-LDRQQGR-----ILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSK 199
E+L + G + A+ ++G+ + +G V++W + +G + K S + +
Sbjct: 373 VERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHL-EGKS-DKKSTCEVTY 430
Query: 200 FSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253
V V D I++G V FWD +G ++ H+ ++++ VS
Sbjct: 431 IGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVS 485
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 138 (53.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 56/235 (23%), Positives = 102/235 (43%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFS 86
I + P LA D+ I IWD+S T + ++ G I L +F DRL S
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLS-TKRIIKILRGH--EQDIYSLDFFPDGDRLVS 314
Query: 87 GGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146
G V +D+R + ++ G ++V +L+AAG+ + ++ S G L
Sbjct: 315 GSGDRSVRIWDLRTSQCSLTLSIEDGVT-TVAVSPDGKLIAAGSLDRTVRVWD-STTGFL 372
Query: 147 YEKL-LDRQQGR-----ILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSK 199
E+L + G + A+ ++G+ + +G V++W + +G + K S + +
Sbjct: 373 VERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHL-EGKS-DKKSTCEVTY 430
Query: 200 FSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253
V V D I++G V FWD +G ++ H+ ++++ VS
Sbjct: 431 IGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVS 485
>MGI|MGI:1341200 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog
(yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1341200 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 CTD:5822 HOVERGEN:HBG030681
OrthoDB:EOG4R7V93 EMBL:AK088254 EMBL:AK088983 IPI:IPI00469755
RefSeq:NP_083822.1 RefSeq:XP_003946476.1 UniGene:Mm.103522
ProteinModelPortal:Q8BU03 SMR:Q8BU03 STRING:Q8BU03
PhosphoSite:Q8BU03 PRIDE:Q8BU03 Ensembl:ENSMUST00000042556
GeneID:110816 KEGG:mmu:110816 InParanoid:Q8BU03 ChiTaRS:PWP2
NextBio:364713 Bgee:Q8BU03 CleanEx:MM_PWP2 Genevestigator:Q8BU03
GermOnline:ENSMUSG00000032834 Uniprot:Q8BU03
Length = 919
Score = 141 (54.7 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 47/189 (24%), Positives = 84/189 (44%)
Query: 120 HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAA-- 177
HKK LL G G +L ++ + L++ + Q R+ A +SSGD++ GC+
Sbjct: 297 HKKTHLLVTGFASGIFHLHELPEFNLIHSLSISDQ--RVASVAINSSGDWIAFGCSGMGQ 354
Query: 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ 236
+ VW+ + L + F+ A+ A+ D I+TG G V+ W+ +G
Sbjct: 355 LLVWEWQSESYV----LKQQGHFNSMVAL---AYSPDGQYIVTGGDDGKVKVWNTLSGFC 407
Query: 237 WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQ--RTRKPQVCSTSGPEQGSSVWVR 294
+ + H + +T + + + + +D TV F R R + ++ P Q S V V
Sbjct: 408 FVTLTEHSSGVTGVTFTTTGHVIVTSSLDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVD 467
Query: 295 SVNRVIHEG 303
S ++ G
Sbjct: 468 SSGEIVSAG 476
>UNIPROTKB|O93277 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9031
"Gallus gallus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF020054 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000162559 HOVERGEN:HBG000780 CTD:9948 IPI:IPI00581678
RefSeq:NP_001004402.1 UniGene:Gga.2409 ProteinModelPortal:O93277
STRING:O93277 PRIDE:O93277 GeneID:422842 KEGG:gga:422842
NextBio:20825413 Uniprot:O93277
Length = 609
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/122 (32%), Positives = 58/122 (47%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIG-DPLSNSIECLTWFNDRLFSG 87
I I+ P SS+L + D++ +IWD+ V +G + L + CL W D L S
Sbjct: 239 IYAISWSPDSSQLLSASGDKTAKIWDVGANSVVSTFNMGSNVLDQQLGCL-WQKDHLLSL 297
Query: 88 GLQGFVNEYDMRRLNIKSSTAVTSG---TCWCLSVHKK--KRLLAAGTEQGHINLFQISD 142
L G++N D N V G + CL+VHK K + +G+ GHIN + SD
Sbjct: 298 SLSGYINYLDKN--NPDKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSNDGHINYWD-SD 354
Query: 143 EG 144
G
Sbjct: 355 TG 356
>DICTYBASE|DDB_G0284621 [details] [associations]
symbol:pwp2 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0030515 "snoRNA
binding" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0284621 GO:GO:0005829 GO:GO:0005730
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364 HSSP:P16649
EMBL:AAFI02000070 KO:K14558 InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:XP_638435.1
ProteinModelPortal:Q54PE0 STRING:Q54PE0 EnsemblProtists:DDB0235358
GeneID:8624685 KEGG:ddi:DDB_G0284621 OMA:HEAPIAC
ProtClustDB:CLSZ2430232 Uniprot:Q54PE0
Length = 922
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 62/240 (25%), Positives = 103/240 (42%)
Query: 81 NDRLFSGG--LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLF 138
N RL+ G +GF +++ + K T C+ H K +LL G G L+
Sbjct: 251 NQRLYKGRWIFKGF-KKFENYGVKCKVKTV-----CF----HLKSKLLLVGFSTGQFILY 300
Query: 139 QISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA--AAVRVWDIHKGHAIHKMSLDK 196
++ LY KL G I +A +++G++L GC+ + VW+ I K +
Sbjct: 301 EMPGFNQLY-KLNISSHG-ISTSAINNTGEWLAFGCSELGQLLVWEWRSETYILKQ---Q 355
Query: 197 SSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS-- 253
++ NT VA+ D TI TG G V+ W+ +G + H+ + A+ S
Sbjct: 356 GHSYNMNT----VAYSPDGQTIATGGEDGKVKIWNTTSGYCYITFTEHEGPVTAVKYSPV 411
Query: 254 EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPE--QGSSVWVRSVNRVIHEGDVKSLALH 311
+N ++ AGVD T+ F R + P Q S + V +I G + S ++
Sbjct: 412 SSQNVVFSAGVDGTIRAFDLVRYRNFRTFVSPNKTQFSCLAVDPSGEIIAAGSLDSFEIY 471
>UNIPROTKB|F1P1L6 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 GO:GO:0014909 EMBL:AADN02016792
IPI:IPI00586339 Ensembl:ENSGALT00000018663 ArrayExpress:F1P1L6
Uniprot:F1P1L6
Length = 408
Score = 104 (41.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 47/212 (22%), Positives = 94/212 (44%)
Query: 31 CIACEPKSSRLAVSRA-DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLF--SG 87
C++ +PK++ LAV+ D +W +S+ + +F +S+ C + +D +F +G
Sbjct: 70 CVSLDPKTNTLAVTGGEDDKAFVWRLSDG---ELLFECSGHKDSVTCAGFSHDSVFVATG 126
Query: 88 GLQGFVNEYDMRRLNIKSST-AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI-SDEGL 145
+ G + + R++ K + G + H + +L AGT G+ +++I S +
Sbjct: 127 DMSGLIKVW---RVDTKEEAWSFEVGDLEWMEWHPQAHVLLAGTADGNSWMWKIPSGDCK 183
Query: 146 LYE-KLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKN 203
++ G+IL G V G +R+WD+ +G ++H + +
Sbjct: 184 TFQGPACPATCGKIL-----PDGKRAVVGYEDGTMRIWDLKQGTSLHVLK----GQDGHQ 234
Query: 204 TAVWCVAFCADFTII-TGDSGGFVRFWDGKTG 234
+ CVA D ++I TG + + TG
Sbjct: 235 DPLTCVASNQDGSLILTGSVDCHAKLVNSATG 266
Score = 76 (31.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 217 IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD--PTVVCFQR 273
+ T G VR WD ++G S+ + H +IL V++D + + D V C QR
Sbjct: 347 VYTCSLDGAVRLWDARSGKMISEYRGHSAEILDFAVNKDASIVVTTSGDHQAKVFCVQR 405
>UNIPROTKB|F1ND84 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 OMA:VWSFEVG GO:GO:0014909
EMBL:AADN02016792 IPI:IPI00821947 Ensembl:ENSGALT00000038174
ArrayExpress:F1ND84 Uniprot:F1ND84
Length = 411
Score = 104 (41.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 47/212 (22%), Positives = 94/212 (44%)
Query: 31 CIACEPKSSRLAVSRA-DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLF--SG 87
C++ +PK++ LAV+ D +W +S+ + +F +S+ C + +D +F +G
Sbjct: 73 CVSLDPKTNTLAVTGGEDDKAFVWRLSDG---ELLFECSGHKDSVTCAGFSHDSVFVATG 129
Query: 88 GLQGFVNEYDMRRLNIKSST-AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI-SDEGL 145
+ G + + R++ K + G + H + +L AGT G+ +++I S +
Sbjct: 130 DMSGLIKVW---RVDTKEEAWSFEVGDLEWMEWHPQAHVLLAGTADGNSWMWKIPSGDCK 186
Query: 146 LYE-KLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKN 203
++ G+IL G V G +R+WD+ +G ++H + +
Sbjct: 187 TFQGPACPATCGKIL-----PDGKRAVVGYEDGTMRIWDLKQGTSLHVLK----GQDGHQ 237
Query: 204 TAVWCVAFCADFTII-TGDSGGFVRFWDGKTG 234
+ CVA D ++I TG + + TG
Sbjct: 238 DPLTCVASNQDGSLILTGSVDCHAKLVNSATG 269
Score = 76 (31.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 217 IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD--PTVVCFQR 273
+ T G VR WD ++G S+ + H +IL V++D + + D V C QR
Sbjct: 350 VYTCSLDGAVRLWDARSGKMISEYRGHSAEILDFAVNKDASIVVTTSGDHQAKVFCVQR 408
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 54/239 (22%), Positives = 102/239 (42%)
Query: 45 RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIK 104
RAD+ + W+ + P + + + I C+ +D L +G + + + + +
Sbjct: 232 RADKIEKNWNAN--PIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVM 289
Query: 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWH 164
+ +G W + + R + +G+ + ++ D LL+ L + C A
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHT--LQGHTSTVRCMAM- 346
Query: 165 SSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSG 223
+G LVTG +RVWD+ G H +L + AV CV F T+++G
Sbjct: 347 -AGSILVTGSRDTTLRVWDVESGR--HLATLH-----GHHAAVRCVQFDGT-TVVSGGYD 397
Query: 224 GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTR-KPQVC 280
V+ W+ TG + H + +L + E E + C+G +D ++ + TR + Q C
Sbjct: 398 FTVKIWNAHTGRCIRTLTGHNNRVYSL-LFESERSIVCSGSLDTSIRVWDFTRPEGQEC 455
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 54/239 (22%), Positives = 102/239 (42%)
Query: 45 RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIK 104
RAD+ + W+ + P + + + I C+ +D L +G + + + + +
Sbjct: 232 RADKIEKNWNAN--PIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVM 289
Query: 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWH 164
+ +G W + + R + +G+ + ++ D LL+ L + C A
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHT--LQGHTSTVRCMAM- 346
Query: 165 SSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSG 223
+G LVTG +RVWD+ G H +L + AV CV F T+++G
Sbjct: 347 -AGSILVTGSRDTTLRVWDVESGR--HLATLH-----GHHAAVRCVQFDGT-TVVSGGYD 397
Query: 224 GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTR-KPQVC 280
V+ W+ TG + H + +L + E E + C+G +D ++ + TR + Q C
Sbjct: 398 FTVKIWNAHTGRCIRTLTGHNNRVYSL-LFESERSIVCSGSLDTSIRVWDFTRPEGQEC 455
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 58/274 (21%), Positives = 111/274 (40%)
Query: 5 CKKRNTMGTYGVHN---IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHV 61
C K T+ + H IK Y + + + +++ D+ + WD+S T V
Sbjct: 36 CGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVS-TGRV 94
Query: 62 DRVFIG-DPLSNSIECLTWFNDR---LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCL 117
R F G D N+++ FND + S G + +D R +++ + + +
Sbjct: 95 IRKFRGHDGEVNAVK----FNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVM 150
Query: 118 SVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-A 176
SV K + G+ G + F + + ++ D + C + + G+ ++ GC +
Sbjct: 151 SVVLTKTEIIGGSVDGTVRTFDMR----IGREMSDNLGQPVNCISISNDGNCVLAGCLDS 206
Query: 177 AVRVWDIHKGHA--IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTG 234
+R+ D G ++K + KS K C +D +I G G V FWD
Sbjct: 207 TLRLLDRTTGELLQVYKGHISKSFKTD------CCLTNSDAHVIGGSEDGLVFFWDLVDA 260
Query: 235 VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268
S + H + +++ E+ + + VD T+
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTI 294
>RGD|1582817 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1582817 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 OrthoDB:EOG4R7V93 IPI:IPI00372838
RefSeq:NP_001162124.1 UniGene:Rn.208019 ProteinModelPortal:D3ZV54
PRIDE:D3ZV54 Ensembl:ENSRNOT00000001605 GeneID:690297
KEGG:rno:690297 UCSC:RGD:1582817 NextBio:740604 Uniprot:D3ZV54
Length = 920
Score = 138 (53.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 46/189 (24%), Positives = 84/189 (44%)
Query: 120 HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAA-- 177
HKK LL G G +L ++ + L++ + Q R+ A +SSGD++ GC+
Sbjct: 299 HKKTHLLVTGFASGIFHLHELPEFNLIHSLSISDQ--RVASVAINSSGDWIAFGCSGLGQ 356
Query: 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ 236
+ VW+ + L + F+ A+ A+ D I+TG G V+ W+ +G
Sbjct: 357 LLVWEWQSESYV----LKQQGHFNSMVAL---AYSPDGQYIVTGGDDGKVKVWNTLSGFC 409
Query: 237 WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQ--RTRKPQVCSTSGPEQGSSVWVR 294
+ + H + +T + + + + +D TV + R R + ++ P Q S V V
Sbjct: 410 FVTLTEHSSGVTGVTFTATGHVIVTSSLDGTVRAYDLHRYRNFRTFTSPRPTQFSCVAVD 469
Query: 295 SVNRVIHEG 303
S ++ G
Sbjct: 470 SSGEIVSAG 478
>TAIR|locus:2040804 [details] [associations]
symbol:WDR55 "AT2G34260" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IMP] [GO:0009855 "determination of bilateral
symmetry" evidence=IMP] [GO:0009960 "endosperm development"
evidence=IMP] [GO:0010197 "polar nucleus fusion" evidence=IMP]
[GO:0009220 "pyrimidine ribonucleotide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0009793
GO:GO:0009960 GO:GO:0009855 GO:GO:0010197 EMBL:AC004481
HOGENOM:HOG000242496 InterPro:IPR017422 PIRSF:PIRSF038169
OMA:WDTRQRS EMBL:AY087666 EMBL:BT005438 EMBL:AK117481
IPI:IPI00524969 PIR:T02314 RefSeq:NP_565782.1 UniGene:At.37828
ProteinModelPortal:O80775 SMR:O80775 STRING:O80775 PaxDb:O80775
PRIDE:O80775 EnsemblPlants:AT2G34260.1 GeneID:817987
KEGG:ath:AT2G34260 TAIR:At2g34260 InParanoid:O80775
PhylomeDB:O80775 ProtClustDB:CLSN2917231 ArrayExpress:O80775
Genevestigator:O80775 Uniprot:O80775
Length = 353
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 46/187 (24%), Positives = 80/187 (42%)
Query: 117 LSVHKKKRLLAAGTEQGHINLFQI-SDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA 175
+ H L+AAG GH++L++ SD L+ E+ + + + G +VT A
Sbjct: 12 IDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFIDDGQRIVTASA 71
Query: 176 -AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTG 234
++ D+ G + L+ + + + NT + + TI +GD G V+ WD +
Sbjct: 72 DCSILATDVETGAQV--AHLENAHEDAVNTLI----NVTETTIASGDDKGCVKIWDTRQR 125
Query: 235 VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV-VCFQRTRKPQVCSTSGPEQGSSVWV 293
+ H+ I +T + D L D T+ VC RT K Q S ++ SV +
Sbjct: 126 SCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDELLSVVI 185
Query: 294 RSVNRVI 300
R +
Sbjct: 186 MKNGRKV 192
>UNIPROTKB|O75083 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=TAS] [GO:0002576 "platelet
degranulation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007596
"blood coagulation" evidence=TAS] [GO:0030168 "platelet activation"
evidence=TAS] Reactome:REACT_604 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005576
GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0002576 GO:GO:0007605 EMBL:AC005674
HOVERGEN:HBG000780 CTD:9948 EMBL:AF020056 EMBL:AF020260
EMBL:AB010427 EMBL:AK291614 EMBL:AC093664 EMBL:BC000201
EMBL:BC002489 EMBL:BC030541 EMBL:AL050108 EMBL:AL110208
IPI:IPI00746165 IPI:IPI00903292 PIR:T13152 RefSeq:NP_005103.2
RefSeq:NP_059830.1 UniGene:Hs.128548 ProteinModelPortal:O75083
SMR:O75083 IntAct:O75083 STRING:O75083 PhosphoSite:O75083
OGP:O75083 REPRODUCTION-2DPAGE:IPI00746165
REPRODUCTION-2DPAGE:O75083 UCD-2DPAGE:O75083 PaxDb:O75083
PRIDE:O75083 Ensembl:ENST00000382451 Ensembl:ENST00000382452
Ensembl:ENST00000499869 Ensembl:ENST00000502702 GeneID:9948
KEGG:hsa:9948 UCSC:uc021xlv.1 UCSC:uc021xlw.1 GeneCards:GC04M010075
HGNC:HGNC:12754 HPA:CAB020804 MIM:604734 neXtProt:NX_O75083
PharmGKB:PA37358 OMA:LKDQKKC ChiTaRS:WDR1 GenomeRNAi:9948
NextBio:37534 ArrayExpress:O75083 Bgee:O75083 CleanEx:HS_WDR1
Genevestigator:O75083 GermOnline:ENSG00000071127 Uniprot:O75083
Length = 606
Score = 134 (52.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 40/122 (32%), Positives = 58/122 (47%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDP-LSNSIECLTWFNDRLFSG 87
I I+ P S+ L + D++ +IWD+S V +G L + CL W D L S
Sbjct: 237 IYAISWSPDSTHLLSASGDKTSKIWDVSVNSVVSTFPMGSTVLDQQLGCL-WQKDHLLSV 295
Query: 88 GLQGFVNEYDMRRLNIKSSTAVTSG---TCWCLSVHKK--KRLLAAGTEQGHINLFQISD 142
L G++N D R N V G + CL+VHK K + +G+ GHIN + S+
Sbjct: 296 SLSGYINYLD--RNNPSKPLHVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWD-SE 352
Query: 143 EG 144
G
Sbjct: 353 TG 354
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 138 (53.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 59/282 (20%), Positives = 117/282 (41%)
Query: 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLT 78
++ + P I +A P LA + D +I+IWD++ T + + D S S+ +
Sbjct: 827 LQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLA-TGELQQTL--DSHSQSVRSVA 883
Query: 79 WFNDR--LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHIN 136
+ D L S L + ++ ++ S SG ++ + LA+G+E+ +
Sbjct: 884 FSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVK 943
Query: 137 LFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLD 195
L+ + LL + L+ + A+ G L + + +++W+ G L
Sbjct: 944 LWNPATGELL--QTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGE------LQ 995
Query: 196 KSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE 254
++ K + + VAF D +++G ++ WD T ++ H + + A+ S
Sbjct: 996 QTFK-GHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSP 1054
Query: 255 DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSV 296
D+ L + +D T+ + + G QG VRSV
Sbjct: 1055 DDKQLASSSLDSTIKLWDSATGELQRTLEGHSQG----VRSV 1092
Score = 127 (49.8 bits), Expect = 0.00048, P = 0.00048
Identities = 54/272 (19%), Positives = 114/272 (41%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDR--LFS 86
+ + P +L D +++IWD + T + + G S ++E L + D L S
Sbjct: 753 VESVVFSPDGKQLVSGSYDDTVKIWDPA-TGELLQTLDGH--SGTVESLAFSPDGKLLAS 809
Query: 87 GGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146
G ++ +D + + + W ++ + LA+ ++ I ++ ++ L
Sbjct: 810 GSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGEL- 868
Query: 147 YEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTA 205
++ LD + A+ G L + + ++VW+ G + SL+ S + K+
Sbjct: 869 -QQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGEL--QQSLEGRSGWVKS-- 923
Query: 206 VWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGV 264
VAF D + +G V+ W+ TG ++ H + + ++ S D L +
Sbjct: 924 ---VAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSS 980
Query: 265 DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSV 296
D T+ + T ++ T +G +W+R+V
Sbjct: 981 DTTIKLWNSTTG-ELQQTF---KGHDLWIRAV 1008
>UNIPROTKB|E1BL00 [details] [associations]
symbol:PWP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558 OMA:VWQCDTP
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 EMBL:DAAA02003485 IPI:IPI00686265
RefSeq:XP_002685190.1 RefSeq:XP_592170.3 ProteinModelPortal:E1BL00
Ensembl:ENSBTAT00000009343 GeneID:514336 KEGG:bta:514336
NextBio:20871282 Uniprot:E1BL00
Length = 919
Score = 136 (52.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 48/189 (25%), Positives = 83/189 (43%)
Query: 120 HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAA-- 177
HKK LL G G +L ++ + L++ + Q R+ A +SSGD++ GC+
Sbjct: 295 HKKVHLLVTGFASGIFHLHELPEFNLIHSLSISDQ--RVASVAINSSGDWIAFGCSGLGQ 352
Query: 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ 236
+ VW+ + L + F N+ V +A+ D I+TG G V+ W+ +G
Sbjct: 353 LLVWEWQSESYV----LKQQGHF--NSMV-SLAYSPDGQYIVTGGDDGKVKVWNSLSGFC 405
Query: 237 WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQ--RTRKPQVCSTSGPEQGSSVWVR 294
+ H + +T + + + +D TV F R R + ++ P Q S V V
Sbjct: 406 FVTFTEHSSGVTGVTFTTTGYVIVTSSMDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVD 465
Query: 295 SVNRVIHEG 303
S ++ G
Sbjct: 466 SSGEIVSAG 474
>UNIPROTKB|Q5ZI36 [details] [associations]
symbol:CDC20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005680 "anaphase-promoting complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0040020 "regulation of meiosis"
evidence=IEA] [GO:0051488 "activation of anaphase-promoting complex
activity" evidence=IEA] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0005680 GO:GO:0031145
GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991
HOGENOM:HOG000195514 HOVERGEN:HBG001024 OrthoDB:EOG4CC414
GeneTree:ENSGT00580000081599 OMA:AVALDNC EMBL:AADN02012741
EMBL:AADN02012739 EMBL:AJ720948 IPI:IPI00601740
RefSeq:NP_001006536.1 UniGene:Gga.9187 STRING:Q5ZI36
Ensembl:ENSGALT00000016208 GeneID:424563 KEGG:gga:424563
InParanoid:Q5ZI36 NextBio:20826883 Uniprot:Q5ZI36
Length = 507
Score = 132 (51.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 54/256 (21%), Positives = 111/256 (43%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG 88
++ ++ + + LAV + +++WD+ + + R S+ + L+W + L SG
Sbjct: 236 VSSVSWIKEGNYLAVGTRNAEVQLWDVQQQKRL-RSMTSH--SSRVGSLSWNSYILSSGS 292
Query: 89 LQGFVNEYDMR--RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI--SDEG 144
G ++ +D+R ++ + T T C L R LA+G +N++ D G
Sbjct: 293 RTGHIHHHDVRVAEHHVATLTGHTQEVCG-LKWSLDGRYLASGGNDNLVNIWPSVQGDSG 351
Query: 145 -LLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAAA---VRVWDIHKGHAIHKMSLDKSSK 199
+ + QG + AW + L TG + +R+W++ G + ++D S+
Sbjct: 352 DFTPVQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGTCLS--AVDAHSQ 409
Query: 200 FSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYL 259
+ +W + +F G + + W T + ++++ H +L LT+S D +
Sbjct: 410 VC--SILWSTTY-KEFISGHGFAQNQLVIWKYPTMAKVTELRGHTARVLNLTMSPDGVTV 466
Query: 260 YCAGVDPTVV---CFQ 272
A D T+ CF+
Sbjct: 467 ASAAADETLRLWRCFE 482
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 105 (42.0 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 35/164 (21%), Positives = 65/164 (39%)
Query: 38 SSRLAVSRADQSIEIWDI-SETPHVDRVFIGDPLSNSIECLTWFNDR--LFSGGLQGFVN 94
SSRL D + +WD ++TP G +N + C+ W D + +G + +
Sbjct: 147 SSRLVTGSGDFTARLWDCDTQTPIA--TMKGH--TNWVSCVAWAPDASIIATGSMDNTIR 202
Query: 95 EYDMRRLN-----IKSSTAVTSGTCWC---LSVHKKKRLLAAGTEQGHINLFQISDEGLL 146
+D ++ + ++ T CW L+ LLA+G++ + ++ + LL
Sbjct: 203 FWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLL 262
Query: 147 YEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIH 190
+ L I C W + +R+WD G +H
Sbjct: 263 FT--LSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLH 304
Score = 72 (30.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 25/96 (26%), Positives = 40/96 (41%)
Query: 217 IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQ-RTR 275
I T VR WDGKTG + ++ H + S D L + D T+ + R++
Sbjct: 404 IATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSK 463
Query: 276 KPQVCSTSGPEQGSSV-WVRSVNRVIHEGDVKSLAL 310
K + +Q +V W RV G K++ +
Sbjct: 464 KMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRI 499
>UNIPROTKB|Q2KJH4 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9913
"Bos taurus" [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 InterPro:IPR011045 SUPFAM:SSF50974
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000162559 HOVERGEN:HBG000780 EMBL:BC105341
IPI:IPI00716638 RefSeq:NP_001039811.1 UniGene:Bt.59546
ProteinModelPortal:Q2KJH4 STRING:Q2KJH4 PRIDE:Q2KJH4 GeneID:533223
KEGG:bta:533223 CTD:9948 OrthoDB:EOG4WH8KB NextBio:20875962
Uniprot:Q2KJH4
Length = 606
Score = 131 (51.2 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIG-DPLSNSIECLTWFNDRLFSG 87
I I+ P S+ L + D++ +IWD++ V+ +G + L + CL W D L S
Sbjct: 237 IYAISWSPDSTHLLSASGDKTSKIWDVNVNSVVNTFTMGSNVLDQQLGCL-WQKDHLLSI 295
Query: 88 GLQGFVNEYDMRRLNIKSSTAVTSG---TCWCLSVHKK--KRLLAAGTEQGHINLFQISD 142
L G++N D N V G + CL+VHK K + +G+ GHIN + S+
Sbjct: 296 SLSGYINYLDKN--NPSKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWD-SE 352
Query: 143 EG 144
G
Sbjct: 353 TG 354
>UNIPROTKB|E1BZK6 [details] [associations]
symbol:EML6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001610 GO:GO:0007165 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR011047 SUPFAM:SSF50998 SMART:SM00086 InterPro:IPR005108
Pfam:PF03451 GeneTree:ENSGT00550000074369 OMA:HTAAAGI
EMBL:AADN02044318 EMBL:AADN02044313 EMBL:AADN02044314
EMBL:AADN02044315 EMBL:AADN02044316 EMBL:AADN02044317
IPI:IPI00585822 Ensembl:ENSGALT00000013206 Uniprot:E1BZK6
Length = 1955
Score = 102 (41.0 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 32/127 (25%), Positives = 54/127 (42%)
Query: 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDP----LSNSIECLTWFNDR 83
+ + ACE A D I +WD P + ++ + + L SI + W DR
Sbjct: 235 IFSMYACE---EGFATGGRDGCIRLWDTDFKP-ITKIDLRETELFYLGLSIRSVCWKADR 290
Query: 84 LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTC----WCLSVHKKKRLLAAGTEQGHINLFQ 139
L +G + E +R + + G C W L+VH KK L G++ + L+
Sbjct: 291 LLAGTQDSEIFEVLVRERD--KPMLIMQGHCEGELWALAVHPKKPLAVTGSDDRSVRLWS 348
Query: 140 ISDEGLL 146
++D L+
Sbjct: 349 LADHALI 355
Score = 76 (31.8 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 34/133 (25%), Positives = 55/133 (41%)
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQ---GR---ILCTAWHSSGDYLVTGCA---AAVRV 180
T+ G + ++ I+ ++Y + Q+ G IL + H DY+ TG AA+ V
Sbjct: 692 TQTGEV-VYHIAAVAVVYNRQQHSQRLYLGHDDDILSLSIHPVKDYVATGQVGRDAAIHV 750
Query: 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITG---DSGGFVRFWDGKTGVQW 237
WD + +SL K V + F AD + D + FWD K G +
Sbjct: 751 WDTQ---TLKCLSLLKGQH---QRGVCALDFSADGKCLASVGLDDNHAIVFWDWKKGEKL 804
Query: 238 SDVKTHKKDILAL 250
+ + HK I +
Sbjct: 805 ATTRGHKDKIFVV 817
Score = 59 (25.8 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 365 ELWSLGSAQSTDL---SSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVA 419
E+W L + S DL +S+ T + L +L+ K++ + A RC+ S DG+ VA
Sbjct: 1686 EIWGLATHPSKDLFISASNDGTARIWDLCDKKLLNKVNLGHPA--RCAAYSPDGEMVA 1741
>UNIPROTKB|Q3SZK1 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9913 "Bos taurus" [GO:0045766 "positive regulation of
angiogenesis" evidence=NAS] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=IMP] [GO:0014909 "smooth
muscle cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BC102815 IPI:IPI00693899
RefSeq:NP_001070463.1 UniGene:Bt.20293 ProteinModelPortal:Q3SZK1
STRING:Q3SZK1 PRIDE:Q3SZK1 Ensembl:ENSBTAT00000005126 GeneID:767919
KEGG:bta:767919 CTD:14 GeneTree:ENSGT00690000102167
HOGENOM:HOG000261676 HOVERGEN:HBG061307 InParanoid:Q3SZK1
OMA:VWSFEVG OrthoDB:EOG4D26PX NextBio:20918276 ArrayExpress:Q3SZK1
GO:GO:0001525 GO:GO:0045766 GO:GO:0010595 GO:GO:0014909
Uniprot:Q3SZK1
Length = 434
Score = 94 (38.1 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 42/196 (21%), Positives = 86/196 (43%)
Query: 31 CIACEPKSSRLAVSRA-DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLF--SG 87
C++ +PK++ LAV+ D +W +S+ + +F +S+ C + +D +G
Sbjct: 96 CVSLDPKTNTLAVTGGEDDKAFVWRLSDG---ELLFECAGHKDSVTCAGFSHDSTLVATG 152
Query: 88 GLQGFVNEYDMRRLNIKSST-AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146
+ G + + +++ K + +G + H + +L AGT G+ ++++
Sbjct: 153 DMSGLLKVW---QVDTKEEVWSFEAGDLEWMEWHPRAPVLLAGTADGNTWMWKVPTGDC- 208
Query: 147 YEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTA 205
K C G V G +R+WD+ +G++IH + K ++ +
Sbjct: 209 --KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNSIHVL---KGTEGHQGPL 263
Query: 206 VWCVAFCADFTII-TG 220
CVA D ++I TG
Sbjct: 264 T-CVATNQDGSLILTG 278
Score = 80 (33.2 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 217 IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD--PTVVCFQR 273
+ T G VR WD +TG +D + H +IL +S+D + + D V C QR
Sbjct: 373 VYTCSLDGIVRLWDARTGRLLTDYRGHTAEILDFALSKDASLVVTTSGDHKAKVFCVQR 431
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 131 (51.2 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 60/298 (20%), Positives = 121/298 (40%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRA-DQSIEIWDISETPHVDRVFIGDP 69
M T + ++ + +NC+ KSSR+ V+ D + +W I + P+ G
Sbjct: 1 MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLYGH- 58
Query: 70 LSNSIECLTWFNDRLF--SGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLA 127
S+ I+ +T+ + +G G + +D+ I + C + H A
Sbjct: 59 -SSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFA 117
Query: 128 AGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKG 186
+G+ ++ ++ I +G ++ + +L + G ++V+G V+VWD+ G
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL--RFTPDGRWVVSGGEDNIVKVWDLTAG 175
Query: 187 HAIHKMSLDKSSKFSKNTAVWCVAFCA-DFTIITGDSGGFVRFWDGKTGVQWSDVKTHKK 245
+ + S + + F +F + TG + V+FWD +T
Sbjct: 176 KLLTEFK-------SHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETA 228
Query: 246 DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG 303
+ L+ + D + C G+ ++ F + +P C G + G W R + +HEG
Sbjct: 229 GVRCLSFNPDGKTVLC-GLQESLKIF--SWEPIRCH-DGVDVG---WSRLSDMNVHEG 279
>ZFIN|ZDB-GENE-040426-2044 [details] [associations]
symbol:cdc20 "cell division cycle 20 homolog"
species:7955 "Danio rerio" [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2044 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HSSP:P16649 KO:K03363 CTD:991 HOVERGEN:HBG001024
EMBL:BC054907 IPI:IPI00611755 RefSeq:NP_998245.1 UniGene:Dr.105018
ProteinModelPortal:Q7SYD7 STRING:Q7SYD7 GeneID:406353
KEGG:dre:406353 InParanoid:Q7SYD7 NextBio:20817971
ArrayExpress:Q7SYD7 Uniprot:Q7SYD7
Length = 496
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 63/262 (24%), Positives = 117/262 (44%)
Query: 41 LAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQ-GFVNEYDMR 99
LA+ +D +E+WD+ + R+ D S + CL+W ND + S G + G ++++D+R
Sbjct: 242 LAIGTSDCKVELWDVQ---YQKRLRSMDGHSARVGCLSW-NDHILSSGSRSGLIHQHDVR 297
Query: 100 RLN--IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL--LDRQQ 155
+ I + T C L+ R LA+G + ++ ++ G + + L Q
Sbjct: 298 VADHHIFTFGGHTQEVCG-LTWSPDGRYLASGGNDNMMYIWPMTT-GSENQAIHALSEHQ 355
Query: 156 GRILCTAWHS-SGDYLVTGCAAA---VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAF 211
G + AW + +G + +R+W+ G I SLD S+ S + F
Sbjct: 356 GAVKALAWCPWQPNIPASGGGTSDRHIRIWNASSGSCIS--SLDTCSQVSS------LVF 407
Query: 212 CADFT-IITGDSGGF----VRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDP 266
++ +++G GF V W + + ++ + H+ IL L +S D + L D
Sbjct: 408 APNYKELVSGH--GFAHDKVVIWKYPSFAKVTEHEGHEARILNLALSPDGSTLASIAADE 465
Query: 267 TV---VCFQR----TRKPQVCS 281
T+ CF++ +KP+ S
Sbjct: 466 TIRLWKCFEKEKDAAKKPKQAS 487
>RGD|620477 [details] [associations]
symbol:Cdc20 "cell division cycle 20" species:10116 "Rattus
norvegicus" [GO:0000922 "spindle pole" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005680 "anaphase-promoting
complex" evidence=IEA;ISO;ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IEA;ISO] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0031915 "positive regulation of
synaptic plasticity" evidence=IEA;ISO;ISS] [GO:0040020 "regulation
of meiosis" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050773 "regulation of dendrite development"
evidence=IMP] [GO:0051301 "cell division" evidence=IEA] [GO:0051488
"activation of anaphase-promoting complex activity"
evidence=IEA;ISO;ISS] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA;ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 RGD:620477
GO:GO:0005813 GO:GO:0048471 GO:GO:0043234 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0016567
GO:GO:0005680 GO:GO:0050773 GO:GO:0000922 GO:GO:0031145
GO:GO:0090129 GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363
CTD:991 HOGENOM:HOG000195514 HOVERGEN:HBG001024 OrthoDB:EOG4CC414
EMBL:U05341 EMBL:AF052695 EMBL:BC085691 IPI:IPI00382084 PIR:B56021
RefSeq:NP_741990.1 UniGene:Rn.9262 ProteinModelPortal:Q62623
IntAct:Q62623 STRING:Q62623 PhosphoSite:Q62623 PRIDE:Q62623
GeneID:64515 KEGG:rno:64515 UCSC:RGD:620477 InParanoid:Q62623
NextBio:613310 ArrayExpress:Q62623 Genevestigator:Q62623
GermOnline:ENSRNOG00000028415 Uniprot:Q62623
Length = 499
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 55/259 (21%), Positives = 115/259 (44%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG 88
I+ +A + + LAV ++ +++WD+ + + + S + L+W + L SG
Sbjct: 229 ISSVAWIKEGNYLAVGTSNAEVQLWDVQQQKRLRNM---TSHSARVSSLSWNSYILSSGS 285
Query: 89 LQGFVNEYDMR--RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS--DEG 144
G ++ +D+R ++ + + + C L R LA+G +N++ + G
Sbjct: 286 RSGHIHHHDVRVAEHHVATLSGHSQEVCG-LRWAPDGRHLASGGNDNIVNVWPSGPGESG 344
Query: 145 LLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAAA---VRVWDIHKGHAIHKMSLDKSSKF 200
+ + + QG + AW + L TG + +R+W++ G + ++D S+
Sbjct: 345 WVPLQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLS--AVDVHSQV 402
Query: 201 SKNTAVWCVAFCADFTIITGDSGGFVR----FWDGKTGVQWSDVKTHKKDILALTVSEDE 256
+ +W + +I+G GF + W T + +++K H +L+LT+S D
Sbjct: 403 C--SILWSPHYKE---LISGH--GFAQNQLVIWKYPTMAKVAELKGHTARVLSLTMSPDG 455
Query: 257 NYLYCAGVDPTVV---CFQ 272
+ A D T+ CF+
Sbjct: 456 ATVASAAADETLRLWRCFE 474
>UNIPROTKB|Q62623 [details] [associations]
symbol:Cdc20 "Cell division cycle protein 20 homolog"
species:10116 "Rattus norvegicus" [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 RGD:620477 GO:GO:0005813 GO:GO:0048471
GO:GO:0043234 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
eggNOG:COG2319 GO:GO:0016567 GO:GO:0005680 GO:GO:0050773
GO:GO:0000922 GO:GO:0031145 GO:GO:0090129 GO:GO:0031915
GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991 HOGENOM:HOG000195514
HOVERGEN:HBG001024 OrthoDB:EOG4CC414 EMBL:U05341 EMBL:AF052695
EMBL:BC085691 IPI:IPI00382084 PIR:B56021 RefSeq:NP_741990.1
UniGene:Rn.9262 ProteinModelPortal:Q62623 IntAct:Q62623
STRING:Q62623 PhosphoSite:Q62623 PRIDE:Q62623 GeneID:64515
KEGG:rno:64515 UCSC:RGD:620477 InParanoid:Q62623 NextBio:613310
ArrayExpress:Q62623 Genevestigator:Q62623
GermOnline:ENSRNOG00000028415 Uniprot:Q62623
Length = 499
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 55/259 (21%), Positives = 115/259 (44%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG 88
I+ +A + + LAV ++ +++WD+ + + + S + L+W + L SG
Sbjct: 229 ISSVAWIKEGNYLAVGTSNAEVQLWDVQQQKRLRNM---TSHSARVSSLSWNSYILSSGS 285
Query: 89 LQGFVNEYDMR--RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS--DEG 144
G ++ +D+R ++ + + + C L R LA+G +N++ + G
Sbjct: 286 RSGHIHHHDVRVAEHHVATLSGHSQEVCG-LRWAPDGRHLASGGNDNIVNVWPSGPGESG 344
Query: 145 LLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAAA---VRVWDIHKGHAIHKMSLDKSSKF 200
+ + + QG + AW + L TG + +R+W++ G + ++D S+
Sbjct: 345 WVPLQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLS--AVDVHSQV 402
Query: 201 SKNTAVWCVAFCADFTIITGDSGGFVR----FWDGKTGVQWSDVKTHKKDILALTVSEDE 256
+ +W + +I+G GF + W T + +++K H +L+LT+S D
Sbjct: 403 C--SILWSPHYKE---LISGH--GFAQNQLVIWKYPTMAKVAELKGHTARVLSLTMSPDG 455
Query: 257 NYLYCAGVDPTVV---CFQ 272
+ A D T+ CF+
Sbjct: 456 ATVASAAADETLRLWRCFE 474
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 116 (45.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 39/159 (24%), Positives = 69/159 (43%)
Query: 115 WCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174
W + + L+ +G+ + +++ SDE L + L+ Q ++ SG+ + +
Sbjct: 24 WGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSS 83
Query: 175 AAA-VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGK 232
A +R+WD+ G I ++D W VAF D + TG G V + +
Sbjct: 84 LDAHIRLWDLESGKQIR--AIDAGP-----VDAWSVAFSPDSQHLATGSHVGKVNIFGVE 136
Query: 233 TGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCF 271
TG + + T K IL++ S D YL +D + F
Sbjct: 137 TGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Score = 51 (23.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 33/165 (20%), Positives = 72/165 (43%)
Query: 458 VLISADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCA 517
+ S D L + +++G + I D+++ ++ + ++ + + S + S Q +V A
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRS-----LTFSPDSQLLVTA 208
Query: 518 DRKSHVVIWKNGQHH---ASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLN-RKAF 573
++ I++ QH A+L + +A P + V+ SD + +D++ R
Sbjct: 209 SDDGYIKIYEV-QHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCV 267
Query: 574 TTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCV 618
TF L Q V G++++ S ++ + DD + V
Sbjct: 268 HTF------------LDHQDQVWGVKYNKNGSKIVSVADDQEIHV 300
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 41/151 (27%), Positives = 73/151 (48%)
Query: 160 CTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTA-VWCVAFCADFT- 216
C ++H +G Y+ TG + R+WD+ G ++ F +TA V +A C D
Sbjct: 614 CVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRL--------FLGHTAPVISIAVCPDGRW 665
Query: 217 IITGDSGGFVRFWDGKTGVQWSDVKTHKKD-ILALTVSEDENYLYCAGVDPTVVCFQRTR 275
+ TG G + WD TG + ++ H K+ I +L+ S++ N L G D TV + +
Sbjct: 666 LSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWD-LK 724
Query: 276 KPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306
K ++ P++ ++ V I++ D+K
Sbjct: 725 KATTEPSAEPDEPFIGYLGDVTASINQ-DIK 754
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 45/217 (20%), Positives = 95/217 (43%)
Query: 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQ-SIEIWDISETPHVDRVFIGDPLSNSIECL 77
I+ Y +VIN + + + VS +D ++ IWD + +D ++ L +
Sbjct: 144 IRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQKEAID--YLETELPITAVAQ 201
Query: 78 TWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINL 137
+ + +FSGG+ ++ +D+R+ I S A T L V + L + + +
Sbjct: 202 SEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRT 261
Query: 138 FQI-----SDEGL-LYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIH 190
+ I ++ + Y+ + ++ +W+ +GD + G +V VWD G ++
Sbjct: 262 WDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKILY 321
Query: 191 KMSLDKSS----KFSKNTAVWCVAFCADFTIITGDSG 223
K+ K + +F+ N V+ +D ++ G+ G
Sbjct: 322 KLPGHKGTVNDVRFTPNNEPIIVSASSDRNLMLGELG 358
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 50/237 (21%), Positives = 99/237 (41%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLF--S 86
I + P + LA D+++++WDI T + F G L I L + +D F S
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDI-HTKKIQHTFYGHELD--IYSLDYSSDGRFIVS 386
Query: 87 GGLQGFVNEYDMRR----LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD 142
G +D+ + + + +++ RL+AAG+ + L+ +
Sbjct: 387 GSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWD-AQ 445
Query: 143 EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFS 201
G E+ + + A+ G L +G ++++WD+ + S +++
Sbjct: 446 TGYFLERY-EGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRS---RSRCRATFNG 501
Query: 202 KNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDEN 257
V VAF D + +I+G V+FWD + G ++ HK ++++ +S N
Sbjct: 502 HKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNN 558
>FB|FBgn0039867 [details] [associations]
symbol:CstF-50 "CstF-50" species:7227 "Drosophila
melanogaster" [GO:0005848 "mRNA cleavage stimulating factor
complex" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006379 KO:K14406
OMA:LYDHTDE GeneTree:ENSGT00700000104487 HSSP:P46680 GO:GO:0005848
FlyBase:FBgn0039867 NextBio:835499 EMBL:AY094802 RefSeq:NP_651883.1
UniGene:Dm.11654 SMR:Q9V9V0 IntAct:Q9V9V0 MINT:MINT-287008
STRING:Q9V9V0 EnsemblMetazoa:FBtr0085865 GeneID:43734
KEGG:dme:Dmel_CG2261 UCSC:CG2261-RA CTD:43734 InParanoid:Q9V9V0
GenomeRNAi:43734 Uniprot:Q9V9V0
Length = 424
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 42/166 (25%), Positives = 75/166 (45%)
Query: 117 LSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176
L H K+ +LA+ + G + LF I+ + + +LC ++H +GDY+ G
Sbjct: 172 LEFHPKEHILASASRDGTVKLFDIAKPSVKKAHKVFTDCEPVLCLSFHPTGDYVAIGTEH 231
Query: 177 AV-RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-TGDSGGFVRFWDGKTG 234
V RV+D+ +S S + V CV + + TG G ++ WDG +G
Sbjct: 232 NVLRVYDVATTQCF--VSAIPSQQHK--AGVTCVKYSPTGKLYATGSYDGDIKIWDGISG 287
Query: 235 VQWSDV-KTHK-KDILALTVSEDENYLYCAGVDPTVVCFQR-TRKP 277
+ + + H I +L + + YL +G+D V ++ T +P
Sbjct: 288 RCINTIAEAHGGAAICSLEFTRNGKYLLSSGMDSLVYLWELCTSRP 333
>RGD|1305789 [details] [associations]
symbol:Wdr1 "WD repeat domain 1" species:10116 "Rattus
norvegicus" [GO:0003779 "actin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305789 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00390000009416
HOGENOM:HOG000162559 HOVERGEN:HBG000780 CTD:9948 OrthoDB:EOG4WH8KB
EMBL:AY986483 EMBL:BC085864 IPI:IPI00215349 RefSeq:NP_001014157.1
UniGene:Rn.3168 HSSP:Q11176 ProteinModelPortal:Q5RKI0 STRING:Q5RKI0
PhosphoSite:Q5RKI0 World-2DPAGE:0004:Q5RKI0 PRIDE:Q5RKI0
Ensembl:ENSRNOT00000024012 GeneID:360950 KEGG:rno:360950
InParanoid:Q5RKI0 NextBio:674693 Genevestigator:Q5RKI0
Uniprot:Q5RKI0
Length = 606
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 38/122 (31%), Positives = 58/122 (47%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIG-DPLSNSIECLTWFNDRLFSG 87
I I+ P S+ L + D++ +IWD++ V +G + L + CL W D L S
Sbjct: 237 IYAISWSPDSTHLLSASGDKTSKIWDVNVNSVVSTFPMGSNVLDQQLGCL-WQKDHLLSI 295
Query: 88 GLQGFVNEYDMRRLNIKSSTAVTSG---TCWCLSVHKK--KRLLAAGTEQGHINLFQISD 142
L G++N D N V G + CL+VHK K + +G+ GHIN + S+
Sbjct: 296 SLSGYINYLDKN--NPSKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWD-SE 352
Query: 143 EG 144
G
Sbjct: 353 TG 354
>RGD|1306281 [details] [associations]
symbol:Aamp "angio-associated, migratory cell protein"
species:10116 "Rattus norvegicus" [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0014909 "smooth muscle cell migration"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306281 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 CTD:14
GeneTree:ENSGT00690000102167 OMA:VWSFEVG EMBL:CH474004
RefSeq:NP_001100390.1 UniGene:Rn.13592 ProteinModelPortal:G3V7V2
PRIDE:G3V7V2 Ensembl:ENSRNOT00000019497 GeneID:301512
KEGG:rno:301512 NextBio:648863 Uniprot:G3V7V2
Length = 435
Score = 93 (37.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 41/195 (21%), Positives = 84/195 (43%)
Query: 31 CIACEPKSSRLAVSRA-DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLF--SG 87
C++ +PK++ LAV+ D +W +S+ + +F +S+ C + +D +G
Sbjct: 97 CVSLDPKTNTLAVTGGEDDKAFVWRLSDG---ELLFECAGHKDSVTCAGFSHDSTLVATG 153
Query: 88 GLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLY 147
+ G + + + + + +G + H + +L AGT G+ ++++ +
Sbjct: 154 DMSGLLKVWQVETK--EEVWSFEAGDLEWMEWHPRAPVLLAGTADGNTWMWKVPNGDC-- 209
Query: 148 EKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAV 206
K C G V G +R+WD+ +G+ IH + K ++ +
Sbjct: 210 -KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNPIHVL---KGTEGHQGPLT 265
Query: 207 WCVAFCADFTII-TG 220
CVA D ++I TG
Sbjct: 266 -CVATNQDGSLILTG 279
Score = 79 (32.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 217 IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD--PTVVCFQR 273
+ T G VR WD +TG +D + H +IL +S+D + + D V C QR
Sbjct: 374 VYTCSLDGVVRLWDARTGRLLTDYRGHTAEILDFALSKDASLVVTTSGDHKAKVFCVQR 432
>UNIPROTKB|Q13685 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0014909 "smooth muscle cell
migration" evidence=IEP] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=ISS] [GO:0009986 "cell
surface" evidence=IDA] [GO:0001525 "angiogenesis" evidence=NAS]
[GO:0008201 "heparin binding" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005737
GO:GO:0009986 GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0008201
CTD:14 HOGENOM:HOG000261676 HOVERGEN:HBG061307 OrthoDB:EOG4D26PX
GO:GO:0001525 GO:GO:0010595 GO:GO:0014909 EMBL:M95627 EMBL:CR456755
EMBL:BC008809 EMBL:BC020244 EMBL:BC039866 IPI:IPI00014481
PIR:I39383 RefSeq:NP_001078.2 UniGene:Hs.83347
ProteinModelPortal:Q13685 SMR:Q13685 IntAct:Q13685
MINT:MINT-1418005 STRING:Q13685 PhosphoSite:Q13685 DMDM:62906874
PaxDb:Q13685 PRIDE:Q13685 Ensembl:ENST00000248450 GeneID:14
KEGG:hsa:14 UCSC:uc002vhk.3 GeneCards:GC02M219092 HGNC:HGNC:18
HPA:CAB017717 MIM:603488 neXtProt:NX_Q13685 PharmGKB:PA24365
InParanoid:Q13685 ChiTaRS:AAMP GenomeRNAi:14 NextBio:31
ArrayExpress:Q13685 Bgee:Q13685 CleanEx:HS_AAMP
Genevestigator:Q13685 GermOnline:ENSG00000127837 Uniprot:Q13685
Length = 434
Score = 92 (37.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 42/196 (21%), Positives = 85/196 (43%)
Query: 31 CIACEPKSSRLAVSRA-DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLF--SG 87
C++ +PK++ LAV+ D +W +S+ + +F +S+ C + +D +G
Sbjct: 96 CVSLDPKTNTLAVTGGEDDKAFVWRLSDG---ELLFECAGHKDSVTCAGFSHDSTLVATG 152
Query: 88 GLQGFVNEYDMRRLNIKSST-AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146
+ G + + +++ K + +G + H + +L AGT G+ ++++ +
Sbjct: 153 DMSGLLKVW---QVDTKEEVWSFEAGDLEWMEWHPRAPVLLAGTADGNTWMWKVPNGDC- 208
Query: 147 YEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTA 205
K C G V G +R+WD+ +G IH + K ++ +
Sbjct: 209 --KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVL---KGTEGHQGPL 263
Query: 206 VWCVAFCADFTII-TG 220
CVA D ++I TG
Sbjct: 264 T-CVAANQDGSLILTG 278
Score = 80 (33.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 217 IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD--PTVVCFQR 273
+ T G VR WD +TG +D + H +IL +S+D + + D V C QR
Sbjct: 373 VYTCSLDGIVRLWDARTGRLLTDYRGHTAEILDFALSKDASLVVTTSGDHKAKVFCVQR 431
>UNIPROTKB|Q5RCG7 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9601 "Pongo abelii" [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0014909 "smooth muscle cell migration"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:14 GeneTree:ENSGT00690000102167
HOVERGEN:HBG061307 OrthoDB:EOG4D26PX GO:GO:0001525 GO:GO:0010595
GO:GO:0014909 EMBL:CR858303 EMBL:CR859206 RefSeq:NP_001125288.1
UniGene:Pab.19266 ProteinModelPortal:Q5RCG7
Ensembl:ENSPPYT00000015307 GeneID:100172186 KEGG:pon:100172186
InParanoid:Q5RCG7 Uniprot:Q5RCG7
Length = 434
Score = 92 (37.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 42/196 (21%), Positives = 85/196 (43%)
Query: 31 CIACEPKSSRLAVSRA-DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLF--SG 87
C++ +PK++ LAV+ D +W +S+ + +F +S+ C + +D +G
Sbjct: 96 CVSLDPKTNTLAVTGGEDDKAFVWRLSDG---ELLFECAGHKDSVTCAGFSHDSTLVATG 152
Query: 88 GLQGFVNEYDMRRLNIKSST-AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146
+ G + + +++ K + +G + H + +L AGT G+ ++++ +
Sbjct: 153 DMSGLLKVW---QVDTKEEVWSFEAGDLEWMEWHPRAPVLLAGTADGNTWMWKVPNGDC- 208
Query: 147 YEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTA 205
K C G V G +R+WD+ +G IH + K ++ +
Sbjct: 209 --KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVL---KGTEGHQGPL 263
Query: 206 VWCVAFCADFTII-TG 220
CVA D ++I TG
Sbjct: 264 T-CVATNQDGSLILTG 278
Score = 80 (33.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 217 IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD--PTVVCFQR 273
+ T G VR WD +TG +D + H +IL +S+D + + D V C QR
Sbjct: 373 VYTCSLDGIVRLWDARTGRLLTDYRGHTAEILDFALSKDASLVVTTSGDHKAKVFCVQR 431
>UNIPROTKB|Q7YR70 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9615 "Canis lupus familiaris" [GO:0014909 "smooth muscle
cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 CTD:14
GeneTree:ENSGT00690000102167 HOGENOM:HOG000261676
HOVERGEN:HBG061307 OMA:VWSFEVG OrthoDB:EOG4D26PX GO:GO:0001525
GO:GO:0010595 GO:GO:0014909 EMBL:AY197355 RefSeq:NP_001013872.1
UniGene:Cfa.8616 ProteinModelPortal:Q7YR70 STRING:Q7YR70
Ensembl:ENSCAFT00000023220 GeneID:478908 KEGG:cfa:478908
InParanoid:Q7YR70 NextBio:20854176 Uniprot:Q7YR70
Length = 435
Score = 92 (37.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 42/196 (21%), Positives = 85/196 (43%)
Query: 31 CIACEPKSSRLAVSRA-DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLF--SG 87
C++ +PK++ LAV+ D +W +S+ + +F +S+ C + +D +G
Sbjct: 97 CVSLDPKTNTLAVTGGEDDKAFVWRLSDG---ELLFECAGHKDSVTCAGFSHDSTLVATG 153
Query: 88 GLQGFVNEYDMRRLNIKSST-AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146
+ G + + +++ K + +G + H + +L AGT G+ ++++ +
Sbjct: 154 DMSGLLKVW---QVDTKEEVWSFEAGDLEWMEWHPRAPVLLAGTADGNTWMWKVPNGDC- 209
Query: 147 YEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTA 205
K C G V G +R+WD+ +G IH + K ++ +
Sbjct: 210 --KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVL---KGTEGHQGPL 264
Query: 206 VWCVAFCADFTII-TG 220
CVA D ++I TG
Sbjct: 265 T-CVATNQDGSLILTG 279
Score = 80 (33.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 217 IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD--PTVVCFQR 273
+ T G VR WD +TG +D + H +IL +S+D + + D V C QR
Sbjct: 374 VYTCSLDGIVRLWDARTGRLLTDYRGHTAEILDFALSKDASLVVTTSGDHKAKVFCVQR 432
>UNIPROTKB|Q12834 [details] [associations]
symbol:CDC20 "Cell division cycle protein 20 homolog"
species:9606 "Homo sapiens" [GO:0051301 "cell division"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050773
"regulation of dendrite development" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051488 "activation of anaphase-promoting complex activity"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;TAS]
[GO:0005680 "anaphase-promoting complex" evidence=IDA] [GO:0090129
"positive regulation of synapse maturation" evidence=ISS]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=ISS] [GO:0005819 "spindle" evidence=TAS] [GO:0007049 "cell
cycle" evidence=TAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007094 "mitotic spindle assembly checkpoint" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_6850 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005813 GO:GO:0048471 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0043234 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0051301 GO:GO:0007094 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
EMBL:CH471059 GO:GO:0008284 eggNOG:COG2319 GO:GO:0016567
GO:GO:0051436 GO:GO:0050773 GO:GO:0000922 Reactome:REACT_8017
GO:GO:0031145 GO:GO:0090129 GO:GO:0031915 GO:GO:0051437
GO:GO:0040020 GO:GO:0000236 PDB:4GGD PDBsum:4GGD GO:GO:0051488
KO:K03363 EMBL:U05340 EMBL:AF099644 EMBL:AK312780 EMBL:BT007388
EMBL:DQ473545 EMBL:AL139289 EMBL:BC000624 EMBL:BC001088
EMBL:BC006272 EMBL:BC009425 EMBL:BC009426 EMBL:BC010044
EMBL:BC012803 EMBL:BC012827 EMBL:BC013303 EMBL:BC015998
EMBL:BC024257 EMBL:BC031294 EMBL:BC110321 IPI:IPI00329526
PIR:A56021 RefSeq:NP_001246.2 UniGene:Hs.524947 PDB:4GGA PDB:4GGC
PDBsum:4GGA PDBsum:4GGC ProteinModelPortal:Q12834 SMR:Q12834
DIP:DIP-29655N IntAct:Q12834 MINT:MINT-2211271 STRING:Q12834
PhosphoSite:Q12834 DMDM:37537762 PaxDb:Q12834 PRIDE:Q12834
DNASU:991 Ensembl:ENST00000310955 Ensembl:ENST00000372462
GeneID:991 KEGG:hsa:991 UCSC:uc001cix.3 CTD:991
GeneCards:GC01P043824 H-InvDB:HIX0034879 HGNC:HGNC:1723
HPA:CAB004525 MIM:603618 neXtProt:NX_Q12834 PharmGKB:PA26257
HOGENOM:HOG000195514 HOVERGEN:HBG001024 InParanoid:Q12834
OMA:RTPGKSN OrthoDB:EOG4CC414 PhylomeDB:Q12834 GenomeRNAi:991
NextBio:4160 PMAP-CutDB:Q12834 ArrayExpress:Q12834 Bgee:Q12834
CleanEx:HS_CDC20 Genevestigator:Q12834 GermOnline:ENSG00000117399
Uniprot:Q12834
Length = 499
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 55/259 (21%), Positives = 115/259 (44%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG 88
I+ +A + + LAV + +++WD+ + + + S + L+W + L SG
Sbjct: 229 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM---TSHSARVGSLSWNSYILSSGS 285
Query: 89 LQGFVNEYDMR--RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS--DEG 144
G ++ +D+R ++ + + + C L R LA+G +N++ + + G
Sbjct: 286 RSGHIHHHDVRVAEHHVATLSGHSQEVCG-LRWAPDGRHLASGGNDNLVNVWPSAPGEGG 344
Query: 145 LLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAAA---VRVWDIHKGHAIHKMSLDKSSKF 200
+ + + QG + AW + L TG + +R+W++ G + ++D S+
Sbjct: 345 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS--AVDAHSQV 402
Query: 201 SKNTAVWCVAFCADFTIITGDSGGFVR----FWDGKTGVQWSDVKTHKKDILALTVSEDE 256
+ +W + +I+G GF + W T + +++K H +L+LT+S D
Sbjct: 403 C--SILWSPHYKE---LISGH--GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG 455
Query: 257 NYLYCAGVDPTVV---CFQ 272
+ A D T+ CF+
Sbjct: 456 ATVASAAADETLRLWRCFE 474
>UNIPROTKB|Q15269 [details] [associations]
symbol:PWP2 "Periodic tryptophan protein 2 homolog"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471079 GO:GO:0004871
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AP001753 EMBL:AB001517
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:X95263
EMBL:X96424 EMBL:X96425 EMBL:U53346 EMBL:U56085 EMBL:U56089
EMBL:U56086 EMBL:U56087 EMBL:U56088 EMBL:AK314184 EMBL:BC013309
EMBL:BC014988 EMBL:AB001523 IPI:IPI00300078 RefSeq:NP_005040.2
UniGene:Hs.449076 ProteinModelPortal:Q15269 SMR:Q15269
IntAct:Q15269 MINT:MINT-1411448 STRING:Q15269 PhosphoSite:Q15269
DMDM:116242740 SWISS-2DPAGE:Q15269 PaxDb:Q15269 PeptideAtlas:Q15269
PRIDE:Q15269 DNASU:5822 Ensembl:ENST00000291576 GeneID:5822
KEGG:hsa:5822 UCSC:uc002zeb.3 CTD:5822 GeneCards:GC21P045527
H-InvDB:HIX0213175 HGNC:HGNC:9711 HPA:HPA024573 MIM:601475
neXtProt:NX_Q15269 PharmGKB:PA162400451 HOVERGEN:HBG030681
InParanoid:Q15269 OrthoDB:EOG4R7V93 PhylomeDB:Q15269
GenomeRNAi:5822 NextBio:22681 ArrayExpress:Q15269 Bgee:Q15269
CleanEx:HS_PWP2 Genevestigator:Q15269 GermOnline:ENSG00000160220
Uniprot:Q15269
Length = 919
Score = 129 (50.5 bits), Expect = 0.00018, P = 0.00018
Identities = 46/189 (24%), Positives = 81/189 (42%)
Query: 120 HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAA-- 177
HKK LL G G +L ++ + L++ + Q I A +SSGD++ GC+
Sbjct: 297 HKKSHLLVTGFASGIFHLHELPEFNLIHSLSISDQS--IASVAINSSGDWIAFGCSGLGQ 354
Query: 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ 236
+ VW+ + L + F+ A+ A+ D I+TG G V+ W+ +G
Sbjct: 355 LLVWEWQSESYV----LKQQGHFNSMVAL---AYSPDGQYIVTGGDDGKVKVWNTLSGFC 407
Query: 237 WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQ--RTRKPQVCSTSGPEQGSSVWVR 294
+ H + +T + + + +D TV F R R + ++ P Q S V V
Sbjct: 408 FVTFTEHSSGVTGVTFTATGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVD 467
Query: 295 SVNRVIHEG 303
+ ++ G
Sbjct: 468 ASGEIVSAG 476
>MGI|MGI:1859866 [details] [associations]
symbol:Cdc20 "cell division cycle 20" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008284 "positive regulation
of cell proliferation" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=IDA] [GO:0040020 "regulation of meiosis" evidence=IGI]
[GO:0043234 "protein complex" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050773
"regulation of dendrite development" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051488 "activation of
anaphase-promoting complex activity" evidence=ISO] [GO:0090129
"positive regulation of synapse maturation" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:1859866 GO:GO:0005813 GO:GO:0048471
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0016567 GO:GO:0005680 GO:GO:0050773 GO:GO:0000922
GO:GO:0031145 GO:GO:0090129 GO:GO:0031915 GO:GO:0040020
GO:GO:0051488 KO:K03363 CTD:991 HOGENOM:HOG000195514
HOVERGEN:HBG001024 OMA:RTPGKSN OrthoDB:EOG4CC414 EMBL:AB045313
EMBL:AF312208 EMBL:AK075998 EMBL:AK076030 EMBL:AK083459
EMBL:AK168650 EMBL:BC003215 IPI:IPI00320406 RefSeq:NP_075712.2
UniGene:Mm.289747 ProteinModelPortal:Q9JJ66 SMR:Q9JJ66
IntAct:Q9JJ66 MINT:MINT-2834618 STRING:Q9JJ66 PhosphoSite:Q9JJ66
PRIDE:Q9JJ66 DNASU:107995 Ensembl:ENSMUST00000006565 GeneID:107995
KEGG:mmu:107995 GeneTree:ENSGT00580000081599 InParanoid:Q9JJ66
NextBio:359849 Bgee:Q9JJ66 CleanEx:MM_CDC20 Genevestigator:Q9JJ66
GermOnline:ENSMUSG00000006398 Uniprot:Q9JJ66
Length = 499
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 55/259 (21%), Positives = 113/259 (43%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG 88
I+ +A + + LAV ++ +++WD+ + + + S + L+W + L SG
Sbjct: 229 ISSVAWIKEGNYLAVGTSNAEVQLWDVQQQKRLRNM---TSHSARVSSLSWNSYILSSGS 285
Query: 89 LQGFVNEYDMR--RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS--DEG 144
G ++ +D+R ++ + + + C L R LA+G +N++ + G
Sbjct: 286 RSGHIHHHDVRVAEHHVATLSGHSQEVCG-LRWAPDGRHLASGGNDNIVNVWPSGPGESG 344
Query: 145 LLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAAA---VRVWDIHKGHAIHKMSLDKSSKF 200
+ + QG + AW + L TG + +R+W++ G + ++D S+
Sbjct: 345 WAPLQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLS--AVDVHSQV 402
Query: 201 SKNTAVWCVAFCADFTIITGDSGGFVR----FWDGKTGVQWSDVKTHKKDILALTVSEDE 256
+ +W + +I+G GF + W T + +++K H +L LT+S D
Sbjct: 403 C--SILWSPHYKE---LISGH--GFAQNQLVIWKYPTMAKVAELKGHTARVLGLTMSPDG 455
Query: 257 NYLYCAGVDPTVV---CFQ 272
+ A D T+ CF+
Sbjct: 456 ATVASAAADETLRLWRCFE 474
>FB|FBgn0001086 [details] [associations]
symbol:fzy "fizzy" species:7227 "Drosophila melanogaster"
[GO:0008054 "cyclin catabolic process" evidence=IMP;IDA]
[GO:0005813 "centrosome" evidence=IDA;TAS] [GO:0005819 "spindle"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA;TAS] [GO:0007096 "regulation
of exit from mitosis" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0030162 "regulation of proteolysis" evidence=TAS]
[GO:0007049 "cell cycle" evidence=IMP] [GO:0009987 "cellular
process" evidence=IMP] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS;IDA] [GO:0005680 "anaphase-promoting complex"
evidence=ISS;IDA] [GO:0090302 "mitotic anaphase-promoting complex
activity" evidence=IDA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0007147 "female meiosis II" evidence=IMP]
[GO:0007144 "female meiosis I" evidence=IGI] [GO:0051488
"activation of anaphase-promoting complex activity" evidence=ISS]
[GO:0007067 "mitosis" evidence=IMP] [GO:0030718 "germ-line stem
cell maintenance" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005813 GO:GO:0006911
GO:GO:0000776 GO:GO:0007067 EMBL:AE014134 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030162 GO:GO:0008054
GO:GO:0007096 GO:GO:0030718 KO:K03363 OMA:RTPGKSN
GeneTree:ENSGT00580000081599 GO:GO:0007144 GO:GO:0007147
EMBL:U22419 EMBL:BT029432 EMBL:BT056243 RefSeq:NP_477501.1
UniGene:Dm.4066 SMR:Q24044 MINT:MINT-922907 STRING:Q24044
EnsemblMetazoa:FBtr0080833 GeneID:34968 KEGG:dme:Dmel_CG4274
UCSC:CG4274-RA CTD:34968 FlyBase:FBgn0001086 InParanoid:Q24044
OrthoDB:EOG4W3R3B GenomeRNAi:34968 NextBio:791144 Uniprot:Q24044
Length = 526
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 66/274 (24%), Positives = 119/274 (43%)
Query: 41 LAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRR 100
LA+ + ++E+WD S+ V R+ + D S + L W + + SG G + +D+R
Sbjct: 266 LAIGNSTGAVELWDCSK---VKRLRVMDGHSARVGSLAWNSFLVSSGSRDGTIVHHDVRA 322
Query: 101 LNIKSSTAV--TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL--LYEKL--LDRQ 154
K ST T C L + LA+G +N++ + G+ + L +
Sbjct: 323 REHKLSTLSGHTQEVCG-LKWSTDFKYLASGGNDNLVNVWSAASGGVGTATDPLHKFNDH 381
Query: 155 QGRILCTAWHS-SGDYLVTGCAAA---VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVA 210
Q + AW L +G A ++ W+++ G + K S+D S+ V +
Sbjct: 382 QAAVRALAWCPWQPSTLASGGGTADRCIKFWNVNNG-TLMK-SVDSKSQ------VCSLL 433
Query: 211 FCADFT-IIT--GDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPT 267
F + +I+ G + + W T V+ +D+ H +L + +S D + + AG D T
Sbjct: 434 FSRHYKELISAHGFANNQLTIWKYPTMVKQADLTGHTSRVLQMAMSPDGSTVISAGADET 493
Query: 268 VV---CF--QRTRKPQVCSTSGPEQGSSVWVRSV 296
+ CF + STS +Q SV+ +S+
Sbjct: 494 LRLWNCFAPDPLASKKAVSTSKGKQ--SVFRQSI 525
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 138 (53.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 54/279 (19%), Positives = 117/279 (41%)
Query: 29 INCIACEPKSSRLAVSRADQ-SIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLF-- 85
+NC++ K+SRL ++ D + +W I +T G ++ ++ + + ++ +
Sbjct: 18 VNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTS-PMSLCGH--TSPVDSVAFNSEEVLVL 74
Query: 86 SGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL 145
+G G + +D+ + + C + H LA+G+ ++ ++ +G
Sbjct: 75 AGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGC 134
Query: 146 LYEKLLDRQQGRILCTAWHSSGDYLVTG-CAAAVRVWDIHKGHAIHKMSLDKSSKFSKNT 204
+ + +G I + G ++V+G V+VWD+ G +H+ + S +
Sbjct: 135 I-QTYKGHTRG-ISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF 192
Query: 205 AVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGV 264
+F + TG + V+FWD +T + + A+ D L+C G+
Sbjct: 193 HP------LEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFC-GL 245
Query: 265 DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG 303
D + + + +P +C G + G W + I+EG
Sbjct: 246 DDGLKVY--SWEPVICR-DGVDMG---WSTLGDFCINEG 278
Score = 39 (18.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 644 SSNSTHVIES-KVAFHFVRRNKHLVYFGSLNDK 675
S +T +ES KVA V ++ YFG DK
Sbjct: 365 SLKATLPLESGKVAT-MVSEKQNAAYFGPAGDK 396
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 63/253 (24%), Positives = 102/253 (40%)
Query: 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSG 87
VI+C P + +LA D+S+ IW+++ R F+G + +T N SG
Sbjct: 20 VISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFR-FVGHT-----DVITGVNFAP-SG 72
Query: 88 GLQGFVNEYDMRRL---NIKS-STAVTSGTCWCLSVHKKK---RLLAAGTEQGHINLFQI 140
L + RL +IK ST + T SVH + RL+ A ++ + ++ +
Sbjct: 73 SLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKS-VKVWGV 131
Query: 141 SDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA--AAVRVWDIHKGHAIHKMS-LDKS 197
+ LY L+R + C + G L+ C VR+WD I+ + S
Sbjct: 132 ERKKFLYS--LNRHTNWVRCARFSPDGR-LIASCGDDRTVRLWDTSSHQCINIFTDYGGS 188
Query: 198 SKFSK-NTAVWCVAFC-ADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED 255
+ F N++ C+A AD TI + WD +T K H + +
Sbjct: 189 ATFVDFNSSGTCIASSGADNTI---------KIWDIRTNKLIQHYKVHNAGVNCFSFHPS 239
Query: 256 ENYLYCAGVDPTV 268
NYL D T+
Sbjct: 240 GNYLISGSSDSTI 252
>MGI|MGI:1337100 [details] [associations]
symbol:Wdr1 "WD repeat domain 1" species:10090 "Mus
musculus" [GO:0003779 "actin binding" evidence=ISA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=ISA] [GO:0015629
"actin cytoskeleton" evidence=ISA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1337100 GO:GO:0005737
GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007605 HOVERGEN:HBG000780 CTD:9948
OrthoDB:EOG4WH8KB OMA:LKDQKKC ChiTaRS:WDR1 EMBL:AF020055
IPI:IPI00314748 RefSeq:NP_035845.1 UniGene:Mm.2654
UniGene:Mm.406120 ProteinModelPortal:O88342 SMR:O88342
STRING:O88342 PhosphoSite:O88342 REPRODUCTION-2DPAGE:IPI00314748
REPRODUCTION-2DPAGE:O88342 UCD-2DPAGE:O88342 PaxDb:O88342
PRIDE:O88342 Ensembl:ENSMUST00000005234 GeneID:22388 KEGG:mmu:22388
InParanoid:O88342 NextBio:302759 Bgee:O88342 CleanEx:MM_WDR1
Genevestigator:O88342 GermOnline:ENSMUSG00000005103 Uniprot:O88342
Length = 606
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIG-DPLSNSIECLTWFNDRLFSG 87
I I+ P S+ L + D++ +IWD++ V +G + L + CL W D L S
Sbjct: 237 IYAISWSPDSTHLLSASGDKTSKIWDVNVNSVVSTFPMGSNVLDQQLGCL-WQKDHLLSI 295
Query: 88 GLQGFVNEYDMRRLNIKSSTAVTSG---TCWCLSVHKK--KRLLAAGTEQGHINLFQISD 142
L G++N D N V G + CL+VH+ K + +G+ GHIN + S+
Sbjct: 296 SLSGYINYLDKN--NPSKPLRVIKGHSKSIQCLTVHRNGGKSYIYSGSHDGHINYWD-SE 352
Query: 143 EG 144
G
Sbjct: 353 TG 354
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 124 (48.7 bits), Expect = 0.00029, P = 0.00029
Identities = 48/189 (25%), Positives = 73/189 (38%)
Query: 47 DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMR-RLNIKS 105
D + WD+ V R + G L D LFSGG V +DMR R NI
Sbjct: 270 DNKVLCWDLESNKQV-RNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFE 328
Query: 106 STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS 165
GT L + +G+ + L+ ++ G L + ++G + H
Sbjct: 329 MKG-HKGTILSLKSQNADPQVISGSMDTTVKLWDLAT-GTSAATLTNHKKG-VRSMVIHE 385
Query: 166 SGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGF 225
TG A ++ W G I +S N+ + +A AD +++G G
Sbjct: 386 KEYSFATGAADNIKQWKCPDGSFIKNLS-------GHNSIINAMALNADNVLVSGGDNGS 438
Query: 226 VRFWDGKTG 234
+ FWD KTG
Sbjct: 439 ISFWDWKTG 447
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 54/245 (22%), Positives = 101/245 (41%)
Query: 23 APEPK---VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTW 79
+P+P + IA P L D+ I++WD+S T V VF G I L +
Sbjct: 354 SPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLS-TQKVRYVFSGH--EQDIYSLDF 410
Query: 80 -FNDR-LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINL 137
N R + SG +D+ + +G +++ + +A G+ I +
Sbjct: 411 SHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVT-AIAISPNDQFIAVGSLDQIIRV 469
Query: 138 FQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGH-----AIHK 191
+ +S G L E+L ++ + A+ L++G ++VW++ AI
Sbjct: 470 WSVS--GTLVERLEGHKES-VYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKP 526
Query: 192 MSLDKSSKFSKNTAVWCVAFCADFTI-ITGDSGGFVRFWDGKTGVQWSDVKTHKKDILAL 250
+ K++ V VA D ++G ++FWD +TG + + HK ++++
Sbjct: 527 EGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISV 586
Query: 251 TVSED 255
S D
Sbjct: 587 CFSPD 591
>UNIPROTKB|Q6ZMW3 [details] [associations]
symbol:EML6 "Echinoderm microtubule-associated protein-like
6" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0005874 InterPro:IPR005108
Pfam:PF03451 HOGENOM:HOG000031037 OrthoDB:EOG4W3SM4 EMBL:AC013414
EMBL:AC093110 EMBL:AC104781 EMBL:AK131467 IPI:IPI00847255
IPI:IPI00895879 RefSeq:NP_001034842.2 UniGene:Hs.656692
ProteinModelPortal:Q6ZMW3 SMR:Q6ZMW3 STRING:Q6ZMW3
PhosphoSite:Q6ZMW3 DMDM:190358904 PRIDE:Q6ZMW3
Ensembl:ENST00000356458 GeneID:400954 KEGG:hsa:400954
UCSC:uc002ryb.4 CTD:400954 GeneCards:GC02P054950 HGNC:HGNC:35412
neXtProt:NX_Q6ZMW3 PharmGKB:PA164719036 OMA:HTAAAGI
GenomeRNAi:400954 NextBio:106344 Bgee:Q6ZMW3 Genevestigator:Q6ZMW3
Uniprot:Q6ZMW3
Length = 1958
Score = 96 (38.9 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN----SIECLTWFNDR 83
+ + ACE A D I +WD P + ++ + + SI + W DR
Sbjct: 240 IFSMYACE---EGFATGGRDGCIRLWDTDFKP-ITKIDLRETEQGYKGLSIRSVCWKADR 295
Query: 84 LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTC----WCLSVHKKKRLLAAGTEQGHINLFQ 139
L +G + E +R + + G C W L++H KK L G++ + L+
Sbjct: 296 LLAGTQDSEIFEVIVRERD--KPMLILQGHCEGELWALALHPKKPLAVTGSDDRSVRLWS 353
Query: 140 ISDEGLL 146
++D L+
Sbjct: 354 LADHALI 360
Score = 71 (30.1 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 34/133 (25%), Positives = 54/133 (40%)
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQ---GR---ILCTAWHSSGDYLVTGCA---AAVRV 180
T+ G + ++ I+ ++Y + Q+ G IL H DY+ TG AA+ V
Sbjct: 697 TQAGEV-VYHIAAVAVVYNRQQHSQRLYLGHDDDILSLTIHPVKDYVATGQVGRDAAIHV 755
Query: 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITG---DSGGFVRFWDGKTGVQW 237
WD + +SL K V + F AD + D + FWD K G +
Sbjct: 756 WDTQ---TLKCLSLLKGQH---QRGVCALDFSADGKCLVSVGLDDFHSIVFWDWKKGEKI 809
Query: 238 SDVKTHKKDILAL 250
+ + HK I +
Sbjct: 810 ATTRGHKDKIFVV 822
Score = 64 (27.6 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 365 ELWSLGSAQSTDL---SSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVA 419
E+W L + S DL +S+ T + L+ +L+ K+S + A RC+ S DG+ VA
Sbjct: 1689 EIWGLATHPSKDLFISASNDGTARIWDLADKKLLNKVSLGHAA--RCAAYSPDGEMVA 1744
>UNIPROTKB|F1MRW5 [details] [associations]
symbol:CDC20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090129 "positive regulation of synapse maturation"
evidence=IEA] [GO:0051488 "activation of anaphase-promoting complex
activity" evidence=IEA] [GO:0040020 "regulation of meiosis"
evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005680 GO:GO:0031145
GO:GO:0090129 GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 OMA:RTPGKSN
GeneTree:ENSGT00580000081599 EMBL:DAAA02009047 IPI:IPI00715664
UniGene:Bt.639 ProteinModelPortal:F1MRW5 Ensembl:ENSBTAT00000012945
Uniprot:F1MRW5
Length = 499
Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
Identities = 55/259 (21%), Positives = 114/259 (44%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG 88
I+ +A + + LAV + +++WD+ + + + S + L W + L SG
Sbjct: 229 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM---TSHSARVGSLCWNSYILSSGS 285
Query: 89 LQGFVNEYDMR--RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS--DEG 144
G ++ +D+R ++ + + + C L R LA+G +N++ + + G
Sbjct: 286 RSGHIHHHDVRVAEHHVATLSGHSQEVCG-LRWAPDGRHLASGGNDNLVNVWPSAPGEGG 344
Query: 145 LLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAAA---VRVWDIHKGHAIHKMSLDKSSKF 200
+ + + QG + AW + L TG + +R+W++ G + ++D S+
Sbjct: 345 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS--AVDAHSQV 402
Query: 201 SKNTAVWCVAFCADFTIITGDSGGFVR----FWDGKTGVQWSDVKTHKKDILALTVSEDE 256
+ +W + +I+G GF + W T + +++K H +L+LT+S D
Sbjct: 403 C--SILWSPHYKE---LISGH--GFAQNQLVIWKYPTMAKVAELKGHTARVLSLTMSPDG 455
Query: 257 NYLYCAGVDPTVV---CFQ 272
+ A D T+ CF+
Sbjct: 456 ATVASAAADETLRLWRCFE 474
>UNIPROTKB|Q9W7F2 [details] [associations]
symbol:wdr1-a "WD repeat-containing protein 1-A"
species:8355 "Xenopus laevis" [GO:0003779 "actin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005884 "actin filament"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030043 "actin filament fragmentation" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003779
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011045 SUPFAM:SSF50974
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005884 GO:GO:0030043
EMBL:AF124140 EMBL:BC041232 EMBL:BC077202 RefSeq:NP_001081923.1
UniGene:Xl.524 ProteinModelPortal:Q9W7F2 GeneID:398123
KEGG:xla:398123 CTD:398123 Xenbase:XB-GENE-6251934
HOVERGEN:HBG000780 Uniprot:Q9W7F2
Length = 607
Score = 110 (43.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 31/114 (27%), Positives = 52/114 (45%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIG-DPLSNSIECLTWFNDRLFSG 87
I ++ P ++L + D++ +IWD++ V +G D L + CL W D L S
Sbjct: 237 IYAVSWSPDGTQLLSASGDKTTKIWDVAANSAVTTFNLGSDVLDQQLGCL-WQKDYLLSV 295
Query: 88 GLQGFVNEYDMRRLNIKSSTAVTSG---TCWCLSVHKK--KRLLAAGTEQGHIN 136
L G++N D N V G + C++V+ + + G+ GHIN
Sbjct: 296 SLSGYINYLDKN--NPARPLRVIKGHNKSIQCMTVNNSDGRSTIYTGSHDGHIN 347
Score = 61 (26.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 216 TIITGDSGGFVRFWDGKTGVQWSDV-KTHKKDILALTVSEDENYLYCAGVDPTV 268
TI TG G + +WD +TG + K H + ++ + + C+ +D T+
Sbjct: 336 TIYTGSHDGHINYWDAETGENDTFTGKGHTNQVSSMDLDGCNQLITCS-MDDTL 388
>SGD|S000002971 [details] [associations]
symbol:CDH1 "Activator of anaphase-promoting
complex/cyclosome (APC/C)" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:2000600 "positive
regulation of cyclin catabolic process" evidence=IDA] [GO:0030332
"cyclin binding" evidence=IDA] [GO:0007092 "activation of mitotic
anaphase-promoting complex activity" evidence=IMP] [GO:0008361
"regulation of cell size" evidence=IMP] [GO:0005680
"anaphase-promoting complex" evidence=IPI] [GO:0045842 "positive
regulation of mitotic metaphase/anaphase transition" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0010697 "negative
regulation of spindle pole body separation" evidence=IGI;IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0010997
"anaphase-promoting complex binding" evidence=IDA] [GO:0097027
"ubiquitin-protein ligase activator activity" evidence=IDA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002971 GO:GO:0005737 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
eggNOG:COG2319 GO:GO:0008361 GO:GO:0005680 GO:GO:0007092
GO:GO:2000060 HOGENOM:HOG000195514 GO:GO:0010997 GO:GO:0097027
KO:K03364 EMBL:Z72525 EMBL:AY693078 PIR:S64005 RefSeq:NP_011512.1
ProteinModelPortal:P53197 SMR:P53197 DIP:DIP-5915N IntAct:P53197
MINT:MINT-673168 STRING:P53197 EnsemblFungi:YGL003C GeneID:852881
KEGG:sce:YGL003C CYGD:YGL003c GeneTree:ENSGT00580000081606
OMA:TSHGYSK OrthoDB:EOG43FM5B NextBio:972526 Genevestigator:P53197
GermOnline:YGL003C GO:GO:0030332 GO:GO:0010697 GO:GO:2000600
Uniprot:P53197
Length = 566
Score = 123 (48.4 bits), Expect = 0.00043, P = 0.00043
Identities = 58/250 (23%), Positives = 107/250 (42%)
Query: 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDM 98
S LAV +A+ +EI+D+ + + R G + + CL+W N L SG + D+
Sbjct: 315 SHLAVGQANGLVEIYDVMKRKCI-RTLSGH--IDRVACLSWNNHVLTSGSRDHRILHRDV 371
Query: 99 RRLN-----IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDR 153
R + I+S T G W ++ +K LA+G +++++ + + + D
Sbjct: 372 RMPDPFFETIESHTQEVCGLKWNVADNK----LASGGNDNVVHVYEGTSKSPILT--FDE 425
Query: 154 QQGRILCTAW--HSSGDYLVTGCAAA---VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWC 208
+ + AW H G L TG A +++W+++ +I +D S+ VW
Sbjct: 426 HKAAVKAMAWSPHKRG-VLATGGGTADRRLKIWNVNT--SIKMSDIDSGSQICN--MVWS 480
Query: 209 VAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268
+ G S + WD + + +K H +L LT+S D + D T+
Sbjct: 481 KN-TNELVTSHGYSKYNLTLWDCNSMDPIAILKGHSFRVLHLTLSNDGTTVVSGAGDETL 539
Query: 269 VCFQRTRKPQ 278
++ KP+
Sbjct: 540 RYWKLFDKPK 549
>UNIPROTKB|Q5H7C0 [details] [associations]
symbol:CDC20 "Cell division cycle protein 20 homolog"
species:9823 "Sus scrofa" [GO:0031915 "positive regulation of
synaptic plasticity" evidence=ISS] [GO:0090129 "positive regulation
of synapse maturation" evidence=ISS] [GO:0051488 "activation of
anaphase-promoting complex activity" evidence=ISS] [GO:0005680
"anaphase-promoting complex" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 GO:GO:0005815
GO:GO:0005680 GO:GO:0000922 GO:GO:0031145 GO:GO:0090129
GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991
HOGENOM:HOG000195514 HOVERGEN:HBG001024 OMA:RTPGKSN
OrthoDB:EOG4CC414 GeneTree:ENSGT00580000081599 EMBL:AB192873
RefSeq:NP_001116566.1 UniGene:Ssc.17001 ProteinModelPortal:Q5H7C0
STRING:Q5H7C0 Ensembl:ENSSSCT00000004368 GeneID:397379
KEGG:ssc:397379 Uniprot:Q5H7C0
Length = 499
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 54/259 (20%), Positives = 114/259 (44%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG 88
++ +A + + LAV + +++WD+ + + + S + L W + L SG
Sbjct: 229 VSSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM---TSHSARVGSLCWNSYILSSGS 285
Query: 89 LQGFVNEYDMR--RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS--DEG 144
G ++ +D+R ++ + + + C L R LA+G +N++ + + G
Sbjct: 286 RSGHIHHHDVRVAEHHVATLSGHSQEVCG-LRWAPDGRHLASGGNDNLVNVWPSAPGEGG 344
Query: 145 LLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAAA---VRVWDIHKGHAIHKMSLDKSSKF 200
+ + + QG + AW + L TG + +R+W++ G + ++D S+
Sbjct: 345 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS--AVDAHSQV 402
Query: 201 SKNTAVWCVAFCADFTIITGDSGGFVR----FWDGKTGVQWSDVKTHKKDILALTVSEDE 256
+ +W + +I+G GF + W T + +++K H +L+LT+S D
Sbjct: 403 C--SILWSPHYKE---LISGH--GFAQNQLVIWKYPTMAKVAELKGHTARVLSLTMSPDG 455
Query: 257 NYLYCAGVDPTVV---CFQ 272
+ A D T+ CF+
Sbjct: 456 ATVASAAADETLRLWRCFE 474
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 96 (38.9 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 39/164 (23%), Positives = 70/164 (42%)
Query: 32 IACEPKSSRLAVSRADQSIEIWDIS-ETPHVDRVFIGDPLSNSIECLTWFND--RLFSGG 88
+A P LA D ++ WD+S ETPH F + + ++W D +L SG
Sbjct: 120 VAFSPTGKYLASGSGDTTVRFWDLSTETPH----FTCKGHRHWVLSISWSPDGKKLASGC 175
Query: 89 LQGFVNEYDMRR-LNI-KSSTAVT---SGTCW-CLSVHKKKRLLAAGTEQGHINLFQISD 142
G V +D L + ++ T + +G W L ++ + R +A+ ++ G + ++ +
Sbjct: 176 KNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTT- 234
Query: 143 EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKG 186
G E++L + C W G ++VW H G
Sbjct: 235 AGRC-ERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 277
Score = 71 (30.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 27/107 (25%), Positives = 40/107 (37%)
Query: 209 VAFCADFTIITGDS-GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPT 267
V F D I+ S ++ WDG+TG + ++ H + + S D L D T
Sbjct: 378 VLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDST 437
Query: 268 VVCFQRTRKPQVCSTSGPEQGSSV----WVRSVNRVIHEGDVKSLAL 310
+ + K Q +T P V W RV G K L +
Sbjct: 438 LKVWDV--KAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 482
>UNIPROTKB|J9P7H8 [details] [associations]
symbol:EML6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001610 GO:GO:0007165 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SMART:SM00086 InterPro:IPR005108 Pfam:PF03451
GeneTree:ENSGT00550000074369 OMA:HTAAAGI EMBL:AAEX03007528
Ensembl:ENSCAFT00000045075 Uniprot:J9P7H8
Length = 1882
Score = 96 (38.9 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN----SIECLTWFNDR 83
+ + ACE A D I +WD P + ++ + + SI + W DR
Sbjct: 240 IFSMYACE---EGFATGGRDGCIRLWDTDFKP-ITKIDLRETEQGYKGLSIRSVCWKADR 295
Query: 84 LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTC----WCLSVHKKKRLLAAGTEQGHINLFQ 139
L +G + E +R + + G C W L++H KK L G++ + L+
Sbjct: 296 LLAGTQDSEIFEVIVRERD--KPMLILQGHCEGELWALALHPKKPLAVTGSDDRSVRLWS 353
Query: 140 ISDEGLL 146
++D L+
Sbjct: 354 LADHALI 360
Score = 67 (28.6 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 33/133 (24%), Positives = 54/133 (40%)
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQ---GR---ILCTAWHSSGDYLVTGCA---AAVRV 180
T+ G + ++ I+ ++Y + Q+ G IL H D++ TG AA+ V
Sbjct: 697 TQTGEV-VYHIAAVAVVYNRQQHSQRLYLGHDDDILSLTIHPVKDFVATGQVGRDAAIHV 755
Query: 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITG---DSGGFVRFWDGKTGVQW 237
WD + +SL K V + F AD + D + FWD K G +
Sbjct: 756 WDTQ---TLKCLSLLKGQH---QRGVCALDFSADGKCLVSVGLDDFHSIVFWDWKKGEKI 809
Query: 238 SDVKTHKKDILAL 250
+ + HK I +
Sbjct: 810 ATTRGHKDKIFVV 822
Score = 64 (27.6 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 49/170 (28%), Positives = 78/170 (45%)
Query: 365 ELWSLGSAQSTDL---SSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS 421
E+W L + + D+ +S+ T + L+ +L+ K++ + A RC+ S DG+ VA
Sbjct: 1689 EIWGLATHPTKDIFISASNDGTARIWDLADKKLLNKVNLGHAA--RCAAYSPDGEMVAIG 1746
Query: 422 TES----CVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLY 477
++ + ++SL + G K R + KS V IS DS L S +
Sbjct: 1747 MKNGEFVILLVNSLKVWGKK----RDR-------KSAIQDVRISPDSRFLAVGSSEHTVD 1795
Query: 478 IIDLS---SLE-IKYCVDPYKSNLMSDVISLVQMSECKQYI-VC-ADRKS 521
DL+ SL I YC D + S VI + S +YI VC + R+S
Sbjct: 1796 FYDLTQGTSLNRIGYCKD-----IPSFVIQM-DFSADGRYIQVCFSSRRS 1839
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 117 (46.2 bits), Expect = 0.00069, P = 0.00069
Identities = 44/233 (18%), Positives = 94/233 (40%)
Query: 86 SGGLQGFVNEYDMRR-LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEG 144
S L + +D+ IKS A W ++ + +A G+ G +N+F + E
Sbjct: 81 SSSLDAHIRLWDLETGKQIKSMDAGPVDA-WTVAFSPDSKYIATGSHLGKVNIFGV--ES 137
Query: 145 LLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKN 203
E LD + IL A+ G YL +G + ++DI G +H +
Sbjct: 138 GKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE-------GHA 190
Query: 204 TAVWCVAFCADFTI-ITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCA 262
+ + F D + +T G+++ +D + + H +L++ S D+ + +
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSS 250
Query: 263 GVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN----RVIHEGDVKSLALH 311
D ++ + + + C + + VW N +++ GD +++ ++
Sbjct: 251 SSDKSIKVWDTSSRS--CVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 127 (49.8 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 53/235 (22%), Positives = 99/235 (42%)
Query: 84 LFSGGLQGFVNEYDMRRLN-IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD 142
L +GG VN + + + N I S T TS C+ + + + AG+ G + L+ +
Sbjct: 36 LATGGEDCRVNIWAVSKPNCIMSLTGHTSAV-GCIQFNSSEERVVAGSLSGSLRLWDLEA 94
Query: 143 EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAA-VRVWDIHKGHAIHKMSLDKSSKFS 201
+L + L + I +H G+YL +G + +++WD+ + + +
Sbjct: 95 AKIL--RTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYK-------G 145
Query: 202 KNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLY 260
AV C+AF D + + V+ WD G ++ +H + + +E YL
Sbjct: 146 HTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNE-YLL 204
Query: 261 CAG-VDPTVVCFQRTRKPQVCSTSGPEQG--SSVWVRSVNRVIHEGDVKSLALHG 312
+G D TV + + + S+ G E G SV ++ G +L ++G
Sbjct: 205 ASGSADRTVKLWDLEKFNMIGSSEG-ETGVVRSVLFNPDGSCLYSGSENTLRVYG 258
Score = 42 (19.8 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 671 SLNDKEMLSVQVNPLSFMEKLPPTWTLTLVVGL 703
S+ND LS+ V+ L+ + P W L L +
Sbjct: 568 SMND---LSIVVDVLNIINLKPSLWKLDLCTSI 597
>MGI|MGI:2442895 [details] [associations]
symbol:Eml6 "echinoderm microtubule associated protein like
6" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2442895 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0005874 HSSP:P16649 InterPro:IPR005108
Pfam:PF03451 GeneTree:ENSGT00550000074369 HOGENOM:HOG000031037
OrthoDB:EOG4W3SM4 CTD:400954 OMA:HTAAAGI EMBL:AL929371
EMBL:AL731792 EMBL:BX005100 EMBL:AK049977 EMBL:AK081418
EMBL:BC024726 IPI:IPI00226736 RefSeq:NP_666128.2 UniGene:Mm.445271
ProteinModelPortal:Q5SQM0 SMR:Q5SQM0 PhosphoSite:Q5SQM0
PaxDb:Q5SQM0 PRIDE:Q5SQM0 Ensembl:ENSMUST00000058902 GeneID:237711
KEGG:mmu:237711 UCSC:uc007ihq.1 InParanoid:Q8C4R3 NextBio:383444
Bgee:Q5SQM0 CleanEx:MM_C230094A16RIK Genevestigator:Q5SQM0
Uniprot:Q5SQM0
Length = 1958
Score = 96 (38.9 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN----SIECLTWFNDR 83
+ + ACE A D I +WD P + ++ + + SI + W DR
Sbjct: 240 IFSLYACE---EGFATGGRDGCIRLWDTDFKP-ITKIDLRETEQGYKGLSIRSVCWKADR 295
Query: 84 LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTC----WCLSVHKKKRLLAAGTEQGHINLFQ 139
L +G + E +R + + G C W L++H KK L G++ + L+
Sbjct: 296 LLAGTQDSEIFEVIVRERD--KPMLILQGHCEGELWALALHPKKPLAVTGSDDRSVRLWS 353
Query: 140 ISDEGLL 146
++D L+
Sbjct: 354 LADHALI 360
Score = 72 (30.4 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 36/133 (27%), Positives = 54/133 (40%)
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQ---GR---ILCTAWHSSGDYLVTGCA---AAVRV 180
T+ G + ++ I+ ++Y + Q+ G IL H DY+ TG AAV V
Sbjct: 697 TQAGEV-VYHIAAVAVVYNRQQHAQRLYLGHDDDILSLTIHPVKDYVATGQVGRDAAVHV 755
Query: 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITG---DSGGFVRFWDGKTGVQW 237
WD + +SL K V + F AD + D V FWD K G +
Sbjct: 756 WDTQ---TLKCLSLLKGHH---QRGVCALDFSADGKCLVSVGLDDFHSVVFWDWKKGEKI 809
Query: 238 SDVKTHKKDILAL 250
+ + HK I +
Sbjct: 810 ATTRGHKDKIFVV 822
Score = 59 (25.8 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 365 ELWSLGSAQSTDL---SSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVA 419
E+W L + S D+ +S+ T + L+ +L+ K++ + A RC+ S DG+ VA
Sbjct: 1689 EIWGLATHPSKDMFISASNDGTARIWDLADKKLLNKVNLGHAA--RCAAYSPDGEMVA 1744
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 116 (45.9 bits), Expect = 0.00078, P = 0.00078
Identities = 54/275 (19%), Positives = 109/275 (39%)
Query: 53 WDISETPHVDRVFIGDPLSNSIECLTWFNDRL-FSGGLQGF------VNEYDMRRLNIKS 105
W ++ + + V G L + ++ W +++L L+G V +D+ N K
Sbjct: 24 WGTNKKENSETVVTGS-LDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVRLWDLE--NGKQ 80
Query: 106 STAVTSGT--CWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAW 163
++ +G W L+ + LA GT G +N+F + Y LD + IL A+
Sbjct: 81 IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS--LDTRGKFILSIAY 138
Query: 164 HSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTI-ITGD 221
G YL +G + ++DI G +H + + + F D + +T
Sbjct: 139 SPDGKYLASGAIDGIINIFDIATGKLLHTLE-------GHAMPIRSLTFSPDSQLLVTAS 191
Query: 222 SGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQ-RTRKPQVC 280
G+++ +D + + H +L + D+ + + D +V + TR C
Sbjct: 192 DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR---TC 248
Query: 281 STSGPEQGSSVWVRSVN----RVIHEGDVKSLALH 311
+ + VW N +++ GD + + ++
Sbjct: 249 VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 283
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 116 (45.9 bits), Expect = 0.00089, P = 0.00089
Identities = 40/159 (25%), Positives = 69/159 (43%)
Query: 115 WCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174
W + + L+ +G+ + +++ SDE L + L+ Q ++ SG+ + +
Sbjct: 24 WGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSS 83
Query: 175 AAA-VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGK 232
A +R+WD+ G I S+D W VAF D + TG G V + +
Sbjct: 84 LDAHIRLWDLESGKQIR--SIDAGP-----VDAWSVAFSPDSQHLATGSHVGKVNIFGVE 136
Query: 233 TGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCF 271
TG + + T K IL++ S D YL +D + F
Sbjct: 137 TGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 99 (39.9 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 35/130 (26%), Positives = 57/130 (43%)
Query: 139 QISDEGLLYEKLLDRQQGRILCTAW---HSSGDYLVTGCA--AAVRVWDIHKGHAIHKMS 193
Q+ L Y K++ G + H + D LVT C+ + R+WD+ ++H +S
Sbjct: 268 QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVT-CSRDSTARIWDVRTKASVHTLS 326
Query: 194 LDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253
++ V C A A+ IITG +R WD G + HKK + A+ V
Sbjct: 327 GHTNAV----ATVRCQA--AEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAV-VL 379
Query: 254 EDENYLYCAG 263
+Y + +G
Sbjct: 380 HPRHYTFASG 389
Score = 67 (28.6 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDIS 56
+ CIA EP + AD++I+IWD++
Sbjct: 206 VRCIAVEPGNQWFVTGSADRTIKIWDLA 233
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 99 (39.9 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 35/130 (26%), Positives = 57/130 (43%)
Query: 139 QISDEGLLYEKLLDRQQGRILCTAW---HSSGDYLVTGCA--AAVRVWDIHKGHAIHKMS 193
Q+ L Y K++ G + H + D LVT C+ + R+WD+ ++H +S
Sbjct: 269 QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVT-CSRDSTARIWDVRTKASVHTLS 327
Query: 194 LDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253
++ V C A A+ IITG +R WD G + HKK + A+ V
Sbjct: 328 GHTNAV----ATVRCQA--AEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAV-VL 380
Query: 254 EDENYLYCAG 263
+Y + +G
Sbjct: 381 HPRHYTFASG 390
Score = 67 (28.6 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDIS 56
+ CIA EP + AD++I+IWD++
Sbjct: 207 VRCIAVEPGNQWFVTGSADRTIKIWDLA 234
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 99 (39.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 35/130 (26%), Positives = 57/130 (43%)
Query: 139 QISDEGLLYEKLLDRQQGRILCTAW---HSSGDYLVTGCA--AAVRVWDIHKGHAIHKMS 193
Q+ L Y K++ G + H + D LVT C+ + R+WD+ ++H +S
Sbjct: 270 QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVT-CSRDSTARIWDVRTKASVHTLS 328
Query: 194 LDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253
++ V C A A+ IITG +R WD G + HKK + A+ V
Sbjct: 329 GHTNAV----ATVRCQA--AEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAV-VL 381
Query: 254 EDENYLYCAG 263
+Y + +G
Sbjct: 382 HPRHYTFASG 391
Score = 67 (28.6 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDIS 56
+ CIA EP + AD++I+IWD++
Sbjct: 208 VRCIAVEPGNQWFVTGSADRTIKIWDLA 235
>UNIPROTKB|F1PX92 [details] [associations]
symbol:EML6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001610 GO:GO:0007165 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SMART:SM00086 InterPro:IPR005108 Pfam:PF03451
GeneTree:ENSGT00550000074369 EMBL:AAEX03007528
Ensembl:ENSCAFT00000004419 Uniprot:F1PX92
Length = 1841
Score = 96 (38.9 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN----SIECLTWFNDR 83
+ + ACE A D I +WD P + ++ + + SI + W DR
Sbjct: 240 IFSMYACE---EGFATGGRDGCIRLWDTDFKP-ITKIDLRETEQGYKGLSIRSVCWKADR 295
Query: 84 LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTC----WCLSVHKKKRLLAAGTEQGHINLFQ 139
L +G + E +R + + G C W L++H KK L G++ + L+
Sbjct: 296 LLAGTQDSEIFEVIVRERD--KPMLILQGHCEGELWALALHPKKPLAVTGSDDRSVRLWS 353
Query: 140 ISDEGLL 146
++D L+
Sbjct: 354 LADHALI 360
Score = 67 (28.6 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 33/133 (24%), Positives = 54/133 (40%)
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQ---GR---ILCTAWHSSGDYLVTGCA---AAVRV 180
T+ G + ++ I+ ++Y + Q+ G IL H D++ TG AA+ V
Sbjct: 697 TQTGEV-VYHIAAVAVVYNRQQHSQRLYLGHDDDILSLTIHPVKDFVATGQVGRDAAIHV 755
Query: 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITG---DSGGFVRFWDGKTGVQW 237
WD + +SL K V + F AD + D + FWD K G +
Sbjct: 756 WDTQ---TLKCLSLLKGQH---QRGVCALDFSADGKCLVSVGLDDFHSIVFWDWKKGEKI 809
Query: 238 SDVKTHKKDILAL 250
+ + HK I +
Sbjct: 810 ATTRGHKDKIFVV 822
Score = 62 (26.9 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 39/138 (28%), Positives = 63/138 (45%)
Query: 365 ELWSLGSAQSTDL---SSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS 421
E+W L + + D+ +S+ T + L+ +L+ K++ + A RC+ S DG+ VA
Sbjct: 1689 EIWGLATHPTKDIFISASNDGTARIWDLADKKLLNKVNLGHAA--RCAAYSPDGEMVAIG 1746
Query: 422 TES----CVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLY 477
++ + ++SL + G K R + KS V IS DS L S +
Sbjct: 1747 MKNGEFVILLVNSLKVWGKK----RDR-------KSAIQDVRISPDSRFLAVGSSEHTVD 1795
Query: 478 IIDLS---SLE-IKYCVD 491
DL+ SL I YC D
Sbjct: 1796 FYDLTQGTSLNRIGYCKD 1813
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 708 693 0.00081 121 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 80
No. of states in DFA: 633 (67 KB)
Total size of DFA: 404 KB (2195 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 57.18u 0.10s 57.28t Elapsed: 00:00:07
Total cpu time: 57.21u 0.10s 57.31t Elapsed: 00:00:08
Start: Thu Aug 15 16:41:48 2013 End: Thu Aug 15 16:41:56 2013