BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12626
(205 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R7Z5|MARE1_PONAB Microtubule-associated protein RP/EB family member 1 OS=Pongo
abelii GN=MAPRE1 PE=2 SV=3
Length = 268
Score = 210 bits (535), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/198 (56%), Positives = 142/198 (71%), Gaps = 8/198 (4%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYIQNFKILQA FK+M VDKI+P+DKLVKG+FQDNFEF+QWFKKFFD
Sbjct: 58 LKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDA 117
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPKQPVA-KSTAAAPR 119
N DYDPV AR G+ S+ A ++K P ++ AP++P++ + TAAAP+
Sbjct: 118 NYDGKDYDPVAARQGQE--TAVAPSLVAPALNKPKKP-LSSSSAAPQRPISTQRTAAAPK 174
Query: 120 AGLN-SRGTPAGRVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQEHE 178
AG R P V N EL Q+ LKLTV+ LEKERDFYFGKLR+IE++CQE+E
Sbjct: 175 AGPGVVRKNPG--VGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENE 232
Query: 179 GET-PVIQNILNILYATE 195
GE PV+Q I++ILYAT+
Sbjct: 233 GENDPVLQRIVDILYATD 250
>sp|Q15691|MARE1_HUMAN Microtubule-associated protein RP/EB family member 1 OS=Homo
sapiens GN=MAPRE1 PE=1 SV=3
Length = 268
Score = 209 bits (533), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 112/198 (56%), Positives = 141/198 (71%), Gaps = 8/198 (4%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYIQNFKILQA FK+M VDKI+P+DKLVKG+FQDNFEF+QWFKKFFD
Sbjct: 58 LKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDA 117
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPKQPVA-KSTAAAPR 119
N DYDPV AR G+ S+ A ++K P + AP++P++ + TAAAP+
Sbjct: 118 NYDGKDYDPVAARQGQE--TAVAPSLVAPALNKPKKP-LTSSSAAPQRPISTQRTAAAPK 174
Query: 120 AGLN-SRGTPAGRVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQEHE 178
AG R P V N EL Q+ LKLTV+ LEKERDFYFGKLR+IE++CQE+E
Sbjct: 175 AGPGVVRKNPG--VGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENE 232
Query: 179 GET-PVIQNILNILYATE 195
GE PV+Q I++ILYAT+
Sbjct: 233 GENDPVLQRIVDILYATD 250
>sp|Q61166|MARE1_MOUSE Microtubule-associated protein RP/EB family member 1 OS=Mus
musculus GN=Mapre1 PE=1 SV=3
Length = 268
Score = 207 bits (528), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/198 (56%), Positives = 139/198 (70%), Gaps = 8/198 (4%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYIQNFKILQA FK+M VDKI+P+DKLVKG+FQDNFEF+QWFKKFFD
Sbjct: 58 LKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDA 117
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPKQPVA-KSTAAAPR 119
N +YDPV AR G+ S+ A + K P + AP++P+A + T AAP+
Sbjct: 118 NYDGKEYDPVAARQGQE--TAVAPSLVAPALSKPKKP-LGSSTAAPQRPIATQRTTAAPK 174
Query: 120 AGLNS-RGTPAGRVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQEHE 178
AG R P V N EL Q+ LKLTV+ LEKERDFYFGKLR+IE++CQE+E
Sbjct: 175 AGPGMVRKNPG--VGNGDDEAAELMQQVKVLKLTVEDLEKERDFYFGKLRNIELICQENE 232
Query: 179 GET-PVIQNILNILYATE 195
GE PV+Q I++ILYAT+
Sbjct: 233 GENDPVLQRIVDILYATD 250
>sp|Q66HR2|MARE1_RAT Microtubule-associated protein RP/EB family member 1 OS=Rattus
norvegicus GN=Mapre1 PE=1 SV=3
Length = 268
Score = 206 bits (524), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/198 (55%), Positives = 139/198 (70%), Gaps = 8/198 (4%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYIQNFKILQA FK+M VDKI+P+DKLVKG+FQDNFEF+QWFKKFFD
Sbjct: 58 LKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDA 117
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPKQPVA-KSTAAAPR 119
N +YDPV AR G+ S+ A + K P + AP++P+A + T AAP+
Sbjct: 118 NYDGKEYDPVAARQGQE--TAVAPSLVAPALSKPKKP-LGSGSAAPQRPIATQRTTAAPK 174
Query: 120 AGLNS-RGTPAGRVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQEHE 178
AG R P + N EL Q+ LKLTV+ LEKERDFYFGKLR+IE++CQE+E
Sbjct: 175 AGPGMVRKNPG--MGNGDDEAAELMQQVKVLKLTVEDLEKERDFYFGKLRNIELICQENE 232
Query: 179 GET-PVIQNILNILYATE 195
GE PV+Q I++ILYAT+
Sbjct: 233 GENDPVLQRIVDILYATD 250
>sp|Q3ZBD9|MARE1_BOVIN Microtubule-associated protein RP/EB family member 1 OS=Bos taurus
GN=MAPRE1 PE=2 SV=3
Length = 268
Score = 204 bits (519), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/198 (55%), Positives = 138/198 (69%), Gaps = 8/198 (4%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYIQNFKILQA FK+M VDKI+P+DKLVKG+FQDNFEF+QWFKKFFD
Sbjct: 58 LKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDA 117
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPKQPVAKS-TAAAPR 119
N +YDPV AR G+ S+ A ++K P ++ AP++P+ T A P+
Sbjct: 118 NYDGKEYDPVAARQGQETAMAP--SLVAPALNKPKKP-LSSSSAAPQRPITTHRTTATPK 174
Query: 120 AGLN-SRGTPAGRVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQEHE 178
AG R P V N EL Q+ LKLTV+ LEKERDFYFGKLR+IE++CQE+E
Sbjct: 175 AGPGVVRKNPG--VGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENE 232
Query: 179 GE-TPVIQNILNILYATE 195
GE PV+Q I++ILYAT+
Sbjct: 233 GENNPVLQRIVDILYATD 250
>sp|Q6P848|MARE1_XENTR Microtubule-associated protein RP/EB family member 1 OS=Xenopus
tropicalis GN=mapre1 PE=2 SV=1
Length = 269
Score = 203 bits (516), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 139/200 (69%), Gaps = 11/200 (5%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYIQNFK+LQA FKKM VDKI+P+DKLVKG+FQDNFEF+QWFKKFFD
Sbjct: 58 LKKVKFQAKLEHEYIQNFKVLQAGFKKMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDA 117
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPA----VAPRPVAPKQPVAKSTAA 116
N DYDPV AR G+ + V ++A ++K P AP+ P Q A S
Sbjct: 118 NYDGKDYDPVAARQGQE--SAPVPVLAAPVLNKPKKPLGSGNTAPQRTVPVQRTAVSN-K 174
Query: 117 APRAGLNSRGTPAGRVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQE 176
P G++ + G D+ S+ EL Q+ LK+TV+ LEKERDFYFGKLR+IE++CQE
Sbjct: 175 PPAQGISKKPATVGNGDDESA---ELIQQINVLKITVEDLEKERDFYFGKLRNIELICQE 231
Query: 177 HEGET-PVIQNILNILYATE 195
+EGE+ PV+Q I+ ILYAT+
Sbjct: 232 NEGESDPVLQRIIEILYATD 251
>sp|Q5XIT1|MARE3_RAT Microtubule-associated protein RP/EB family member 3 OS=Rattus
norvegicus GN=Mapre3 PE=1 SV=1
Length = 281
Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 143/208 (68%), Gaps = 19/208 (9%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+++VKF+ LEHEYI NFK+LQAAFKKM VDKI+P++KLVKG+FQDNFEF+QWFKKFFD
Sbjct: 58 LRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDA 117
Query: 61 NNTVADYDPVGARGGEAMG----------NGSVRSISATQIHKRTTPAVAPRPVAPKQPV 110
N DY+P+ AR G+ + N S + I T + +RT+P P+ + Q
Sbjct: 118 NYDGKDYNPLLARQGQDVAPPPNPGDQIFNKSKKLI-GTAVPQRTSP-TGPKNM---QTS 172
Query: 111 AKSTAAAPRAGLNSRGTPAGRVDNNS--SRVDELNSQMMDLKLTVDGLEKERDFYFGKLR 168
+ + AP L + P+ R + +++ ELN Q++DLKLTVDGLEKERDFYF KLR
Sbjct: 173 GRLSNVAPPCILR-KNPPSARNGGHEADAQILELNQQLLDLKLTVDGLEKERDFYFSKLR 231
Query: 169 DIEVLCQEHEGE-TPVIQNILNILYATE 195
DIE++CQEHE E +PVI I+ ILYATE
Sbjct: 232 DIELICQEHESENSPVISGIIGILYATE 259
>sp|Q6PER3|MARE3_MOUSE Microtubule-associated protein RP/EB family member 3 OS=Mus
musculus GN=Mapre3 PE=1 SV=1
Length = 281
Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 143/208 (68%), Gaps = 19/208 (9%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+++VKF+ LEHEYI NFK+LQAAFKKM VDKI+P++KLVKG+FQDNFEF+QWFKKFFD
Sbjct: 58 LRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDA 117
Query: 61 NNTVADYDPVGARGGEAMG----------NGSVRSISATQIHKRTTPAVAPRPVAPKQPV 110
N DY+P+ AR G+ + N S + I T + +RT+P P+ + Q
Sbjct: 118 NYDGKDYNPLLARQGQDVAPPPNPGDQIFNKSKKLI-GTAVPQRTSP-TGPKNM---QTS 172
Query: 111 AKSTAAAPRAGLNSRGTPAGRVDNNS--SRVDELNSQMMDLKLTVDGLEKERDFYFGKLR 168
+ + AP L + P+ R + +++ ELN Q++DLKLTVDGLEKERDFYF KLR
Sbjct: 173 GRLSNVAPPCILR-KNPPSARNGGHEADAQILELNQQLLDLKLTVDGLEKERDFYFSKLR 231
Query: 169 DIEVLCQEHEGE-TPVIQNILNILYATE 195
DIE++CQEHE E +PVI I+ ILYATE
Sbjct: 232 DIELICQEHESENSPVISGIIGILYATE 259
>sp|Q9UPY8|MARE3_HUMAN Microtubule-associated protein RP/EB family member 3 OS=Homo
sapiens GN=MAPRE3 PE=1 SV=1
Length = 281
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 142/210 (67%), Gaps = 23/210 (10%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+++VKF+ LEHEYI NFK+LQAAFKKM VDKI+P++KLVKG+FQDNFEF+QWFKKFFD
Sbjct: 58 LRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDA 117
Query: 61 NNTVADYDPVGARGGEAMG----------NGSVRSISATQIHKRTTPAVAPRPVAPK--Q 108
N DY+P+ AR G+ + N S + I T + +RT+ P PK Q
Sbjct: 118 NYDGKDYNPLLARQGQDVAPPPNPGDQIFNKSKKLI-GTAVPQRTS------PTGPKNMQ 170
Query: 109 PVAKSTAAAPRAGLNSRGTPAGRVDNNSS--RVDELNSQMMDLKLTVDGLEKERDFYFGK 166
+ + AP L + P+ R + + ++ ELN Q++DLKLTVDGLEKERDFYF K
Sbjct: 171 TSGRLSNVAPPCILR-KNPPSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSK 229
Query: 167 LRDIEVLCQEHEGE-TPVIQNILNILYATE 195
LRDIE++CQEHE E +PVI I+ ILYATE
Sbjct: 230 LRDIELICQEHESENSPVISGIIGILYATE 259
>sp|Q6V291|MARE1_COTCO Microtubule-associated protein RP/EB family member 1 OS=Coturnix
coturnix GN=MAPRE1 PE=2 SV=1
Length = 263
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 139/197 (70%), Gaps = 11/197 (5%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYIQNFK+LQA FK+M VDKI+P+DKLVKG+FQDNFEF+QWFKKFFD
Sbjct: 58 LKKVKFQAKLEHEYIQNFKVLQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDA 117
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPKQP-VAKSTAAAPR 119
N +YDPV AR G+ ++ A ++K P + AP++P VA+ T A P+
Sbjct: 118 NYDGKEYDPVAARQGQET---VAPNLVAPVMNKPKKP-LGTGSAAPQRPIVAQRTPATPK 173
Query: 120 AGLNSRGTPAGRVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQEHEG 179
G AG D ++ ++++N LKLTV+ LEKERDFYFGKLR+IE++CQE+EG
Sbjct: 174 GGTGMVKKAAGD-DESAGLIEQINV----LKLTVEDLEKERDFYFGKLRNIELICQENEG 228
Query: 180 ET-PVIQNILNILYATE 195
E PV+Q I+ ILYAT+
Sbjct: 229 ENDPVLQRIVEILYATD 245
>sp|Q5ZLC7|MARE1_CHICK Microtubule-associated protein RP/EB family member 1 OS=Gallus
gallus GN=MAPRE1 PE=2 SV=1
Length = 258
Score = 197 bits (502), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 135/196 (68%), Gaps = 14/196 (7%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYIQNFK+LQA FK+M VDKI+P+DKLVKG+FQDNFEF+QWFKKFFD
Sbjct: 58 LKKVKFQAKLEHEYIQNFKVLQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDA 117
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPKQPVAKSTAAAPRA 120
N +YDPV AR G+ ++ A ++K P RP+ VA+ T A P+
Sbjct: 118 NYDGKEYDPVAARQGQ---ETVAPNLVAPVVNKPKKPLAPQRPI-----VAQRTPATPKG 169
Query: 121 GLNSRGTPAGRVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQEHEGE 180
AG D ++ ++++N LKLTV+ LEKERDFYFGKLR+IE++CQE+EGE
Sbjct: 170 STGMVKKAAGD-DESAGLIEQINV----LKLTVEDLEKERDFYFGKLRNIELICQENEGE 224
Query: 181 T-PVIQNILNILYATE 195
PV+Q I+ ILYAT+
Sbjct: 225 NDPVLQRIVEILYATD 240
>sp|Q66T82|MARE1_COTJA Microtubule-associated protein RP/EB family member 1 OS=Coturnix
coturnix japonica GN=MAPRE1 PE=2 SV=1
Length = 263
Score = 197 bits (501), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 138/197 (70%), Gaps = 11/197 (5%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYIQNFK+LQA FK+M VDKI+P+DKLVKG+FQDNFEF+QWFKKFFD
Sbjct: 58 LKKVKFQAKLEHEYIQNFKVLQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDA 117
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPKQP-VAKSTAAAPR 119
N +YDPV AR G+ ++ A ++K P + P++P VA+ T A P+
Sbjct: 118 NYDGKEYDPVAARQGQET---VAPNLVAPVMNKPKKP-LGTGSAGPQRPIVAQRTPATPK 173
Query: 120 AGLNSRGTPAGRVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQEHEG 179
G AG D ++ ++++N LKLTV+ LEKERDFYFGKLR+IE++CQE+EG
Sbjct: 174 GGTGMVKKAAGD-DESAGLIEQINV----LKLTVEDLEKERDFYFGKLRNIELICQENEG 228
Query: 180 ET-PVIQNILNILYATE 195
E PV+Q I+ ILYAT+
Sbjct: 229 ENDPVLQRIVEILYATD 245
>sp|Q7ZXP1|MARE2_XENLA Microtubule-associated protein RP/EB family member 2 OS=Xenopus
laevis GN=mapre2 PE=2 SV=1
Length = 327
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 139/201 (69%), Gaps = 7/201 (3%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYI NFK+LQA+FK+MNVDK++P++KLVKGRFQDN +F+QWFKKFFD
Sbjct: 100 LKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFFDA 159
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPK-QPVAK--STAAA 117
N +YDP+ AR G+ + K+ A +P A + P+AK ST++
Sbjct: 160 NYDGKEYDPMEARQGQDALPPPDPGEQIFNLPKKPHHANSPTAGAARSSPIAKPGSTSSR 219
Query: 118 PRAGLNSRGTPAGRVDNN-SSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQE 176
P + + P+ + D + ++V LN Q+ LK+ ++G+EKERDFYFGKLR+IE+LCQE
Sbjct: 220 PSSAKKAVPCPSVKSDKDLETQVSHLNEQVHSLKIALEGVEKERDFYFGKLREIELLCQE 279
Query: 177 H--EGETPVIQNILNILYATE 195
H EG+ ++Q +++ILY++E
Sbjct: 280 HGQEGDD-LLQRLMDILYSSE 299
>sp|Q5R4I6|MARE2_PONAB Microtubule-associated protein RP/EB family member 2 OS=Pongo
abelii GN=MAPRE2 PE=2 SV=1
Length = 327
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 135/201 (67%), Gaps = 6/201 (2%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYI NFK+LQA+FK+MNVDK++P++KLVKGRFQDN +F+QWFKKF+D
Sbjct: 101 LKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDA 160
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPK-QPVAK--STAAA 117
N +YDPV AR G+ + K++ A +P A K P AK ST +
Sbjct: 161 NYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSR 220
Query: 118 PRAGLNSRGTPAGRVDNN--SSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQ 175
P + + + + + ++V +LN Q+ LKL ++G+EKERDFYFGKLR+IE+LCQ
Sbjct: 221 PSSAKRASSSGSASRSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQ 280
Query: 176 EHEGET-PVIQNILNILYATE 195
EH E ++Q ++++LYA+E
Sbjct: 281 EHGQENDDLVQRLMDVLYASE 301
>sp|Q15555|MARE2_HUMAN Microtubule-associated protein RP/EB family member 2 OS=Homo
sapiens GN=MAPRE2 PE=1 SV=1
Length = 327
Score = 177 bits (449), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 135/201 (67%), Gaps = 6/201 (2%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYI NFK+LQA+FK+MNVDK++P++KLVKGRFQDN +F+QWFKKF+D
Sbjct: 101 LKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDA 160
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPK-QPVAK--STAAA 117
N +YDPV AR G+ + K++ A +P A K P AK ST +
Sbjct: 161 NYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSR 220
Query: 118 PRAGLNSRGTPAGRVDNN--SSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQ 175
P + + + + + ++V +LN Q+ LKL ++G+EKERDFYFGKLR+IE+LCQ
Sbjct: 221 PSSAKRASSSGSASKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQ 280
Query: 176 EHEGET-PVIQNILNILYATE 195
EH E ++Q +++ILYA+E
Sbjct: 281 EHGQENDDLVQRLMDILYASE 301
>sp|Q3B8Q0|MARE2_RAT Microtubule-associated protein RP/EB family member 2 OS=Rattus
norvegicus GN=Mapre2 PE=2 SV=1
Length = 326
Score = 175 bits (444), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 134/201 (66%), Gaps = 6/201 (2%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYI NFK+LQA+FK+MNVDK++P++KLVKGRFQDN +F+QWFKKF+D
Sbjct: 100 LKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDA 159
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPK-QPVAK--STAAA 117
N +YDPV AR G+ + K++ A +P A K P AK ST +
Sbjct: 160 NYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSR 219
Query: 118 PRAGLNSRGTPAGRVDNN--SSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQ 175
P + + + + + ++V +LN Q+ LKL ++G+EKERDFYFGKLR+IE+LCQ
Sbjct: 220 PSSAKRASSSGSASRSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQ 279
Query: 176 EHEGET-PVIQNILNILYATE 195
EH E ++Q ++ +LYA++
Sbjct: 280 EHGQENDDLVQRLMEVLYASD 300
>sp|Q3SZP2|MARE2_BOVIN Microtubule-associated protein RP/EB family member 2 OS=Bos taurus
GN=MAPRE2 PE=2 SV=1
Length = 326
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 135/201 (67%), Gaps = 6/201 (2%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYI NFK+LQA+FK+MNVDK++P++KLVKGRFQDN +F+QWFKKF+D
Sbjct: 100 LKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDA 159
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPK-QPVAK--STAAA 117
N +YDPV AR G+ + K++ A +P A K P +K ST +
Sbjct: 160 NYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPASKPGSTPSR 219
Query: 118 PRAGLNSRGTPAGRVDNN--SSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQ 175
P + + + + + ++V +LN Q+ LKL ++G+EKERDFYFGKLR+IE+LCQ
Sbjct: 220 PSSAKRASSSGSASRSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQ 279
Query: 176 EHEGET-PVIQNILNILYATE 195
EH E ++Q ++++LYA++
Sbjct: 280 EHGQENDDLVQRLMDVLYASD 300
>sp|Q8R001|MARE2_MOUSE Microtubule-associated protein RP/EB family member 2 OS=Mus
musculus GN=Mapre2 PE=1 SV=1
Length = 326
Score = 174 bits (441), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 134/201 (66%), Gaps = 6/201 (2%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYI NFK+LQA+FK+MNVDK++P++KLVKGRFQDN +F+QWFKKF+D
Sbjct: 100 LKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDA 159
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPK-QPVAK--STAAA 117
N +YDPV AR G+ + K++ A +P A K P +K ST +
Sbjct: 160 NYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPASKPGSTPSR 219
Query: 118 PRAGLNSRGTPAGRVDNN--SSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQ 175
P + + + + + ++V +LN Q+ LKL ++G+EKERDFYFGKLR+IE+LCQ
Sbjct: 220 PSSAKRASSSGSASRSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQ 279
Query: 176 EHEGET-PVIQNILNILYATE 195
EH E ++Q ++ +LYA++
Sbjct: 280 EHGQENDDLVQRLMEVLYASD 300
>sp|Q5ZKK1|MARE2_CHICK Microtubule-associated protein RP/EB family member 2 OS=Gallus
gallus GN=MAPRE2 PE=2 SV=1
Length = 338
Score = 173 bits (439), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 128/200 (64%), Gaps = 6/200 (3%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+VKF+ LEHEYI NFK+LQA+FK+MNVDK++P++KLVKGRFQDN +F+QWFKKFFD
Sbjct: 101 LKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFFDA 160
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPKQPVAKSTAAAPRA 120
N +YDPV AR G+ + K++ A +P A K A + P
Sbjct: 161 NYDGKEYDPVEARQGQDALPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPASKPGSTPSR 220
Query: 121 GLNSRGTPAGRVDNN-----SSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQ 175
+++ + ++V +L+ Q+ LKL ++G+EKERDFYFGKLR+IE+LCQ
Sbjct: 221 PSSAKKAAPSSSASKSDKDLETQVIQLSEQVHSLKLALEGVEKERDFYFGKLREIELLCQ 280
Query: 176 EHEGE-TPVIQNILNILYAT 194
EH GE ++ ++ +LYA+
Sbjct: 281 EHGGENNDLVHRLMEVLYAS 300
>sp|Q9FJJ5|EB1B_ARATH Microtubule-associated protein RP/EB family member 1B
OS=Arabidopsis thaliana GN=EB1B PE=1 SV=1
Length = 293
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 117/204 (57%), Gaps = 24/204 (11%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFD- 59
M +V F E+E IQN+K++Q F K+ + K + +++LVKGR DN EFLQW K+F D
Sbjct: 57 MHKVNFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDS 116
Query: 60 VNNTVA--DYDPVG--ARGG-EAMGNGSVRSISATQIHKRTTPAVAP--RPVAPKQPVAK 112
+N + +Y+PV +RGG E GS + + Q + P VA +P PKQ
Sbjct: 117 INGGIMNENYNPVERRSRGGREKSVKGSSKISKSLQTNNMHHPPVATSNKPAGPKQA--- 173
Query: 113 STAAAPRAGLNSRGTPAGRVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEV 172
S G G N+S+ V L+ ++ DLK++VD LEKERDFYF KLRDIE+
Sbjct: 174 ----------KSHGIGGG--SNSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEI 221
Query: 173 LCQEHE-GETPVIQNILNILYATE 195
LCQ E + P++ + ILYAT+
Sbjct: 222 LCQTPELDDLPIVVAVKKILYATD 245
>sp|Q7XJ60|EB1A_ARATH Microtubule-associated protein RP/EB family member 1A
OS=Arabidopsis thaliana GN=EB1A PE=1 SV=1
Length = 276
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 110/199 (55%), Gaps = 21/199 (10%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFD- 59
M +V F E++ IQN+K+LQ F K+ + K + I++LVKGR DN EFLQW K+F D
Sbjct: 57 MHKVNFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDS 116
Query: 60 VNNTV--ADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPKQPVAKSTAAA 117
+N + +Y+PV R NG RS+ + ++ P V S A+
Sbjct: 117 INGGIMNENYNPVERRS----RNGKERSVKGSNKIPKSLQTNNNHPPPNSSSVGLSKASG 172
Query: 118 PRAGLNSRGTPAGRVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQEH 177
P++ ++ V L+ +++DLK++ D LEKERDFYF KLRD+E+LCQ
Sbjct: 173 PKSA-------------KAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTP 219
Query: 178 E-GETPVIQNILNILYATE 195
E + P++ + ILYAT+
Sbjct: 220 ELDDLPIVVAVKKILYATD 238
>sp|Q10113|MAL3_SCHPO Microtubule integrity protein mal3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mal3 PE=1 SV=1
Length = 308
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 7/200 (3%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K+V F N E++YI N+K+LQ F K +DK+V ++L + + QDN EF+QW K+F+D
Sbjct: 45 LKKVNFECNNEYQYINNWKVLQQVFLKKGIDKVVDPERLSRCKMQDNLEFVQWAKRFWDQ 104
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPKQPVAKSTAAAPRA 120
DYD + RG N V + SA V+ P + KS+A
Sbjct: 105 YYPGGDYDALARRGNRGPANTRVMNSSAGATGPSRRRQVSSGSSTPS--MTKSSANNNNV 162
Query: 121 GLNSRGTPAGRVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQEHEGE 180
+ R ++ L +Q+ ++ T+ GLE+ERDFYF KLR+IE+L Q H
Sbjct: 163 SSTANTAAVLRAKQAQQQITSLETQLYEVNETMFGLERERDFYFNKLREIEILVQTHLTT 222
Query: 181 TPV-IQNILN----ILYATE 195
+P+ ++N+L ILY+TE
Sbjct: 223 SPMSMENMLERIQAILYSTE 242
>sp|Q9FGQ6|EB1C_ARATH Microtubule-associated protein RP/EB family member 1C
OS=Arabidopsis thaliana GN=EB1C PE=1 SV=1
Length = 329
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 13/205 (6%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFD- 59
M +V F E+E IQN+K+LQ F K+ + K + + KLVKGR DN EF+QW KK+ D
Sbjct: 57 MHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDS 116
Query: 60 VNNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPKQPVAKSTAAAPR 119
VN +Y + R G + + +ATQ +++ + AP + K +
Sbjct: 117 VNGGQHNYHALERREASKGGKEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHEPQSNN 176
Query: 120 AGLNSRGT--------PAGRVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIE 171
G + T P+ + S V + ++ +LKL +D LEKERDFYF KLRD+E
Sbjct: 177 TGTHHSSTGNHHHSSKPSAK---QSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRDVE 233
Query: 172 VLCQEHEGE-TPVIQNILNILYATE 195
+LCQ + E P++ +I ILYA +
Sbjct: 234 ILCQNPDTEHLPLVGSIKRILYAAD 258
>sp|P40013|BIM1_YEAST Protein BIM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=BIM1 PE=1 SV=1
Length = 344
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 91/194 (46%), Gaps = 29/194 (14%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
M RVKF E+E+ N+KILQ+ F + ++K V +DKL++ +FQDN EFLQW KK +
Sbjct: 49 MNRVKFNATAEYEFQTNYKILQSCFSRHGIEKTVYVDKLIRCKFQDNLEFLQWLKKHWIR 108
Query: 61 NNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPKQPVAKSTAAAPRA 120
+ + YDP R R I + T P P K+ + T +A
Sbjct: 109 HKDESVYDPDARR--------KYRPIITN--NSATKPRTVSNPTTAKRSSSTGTGSAMSG 158
Query: 121 GLNSRGTPAG-------------------RVDNNSSRVDELNSQMMDLKLTVDGLEKERD 161
GL +R + G + + + LN ++ K TV LE ER+
Sbjct: 159 GLATRHSSLGINGSRKTSVTQGQLVAIQAELTKSQETIGSLNEEIEQYKGTVSTLEIERE 218
Query: 162 FYFGKLRDIEVLCQ 175
FYF KLRDIE+L
Sbjct: 219 FYFNKLRDIEILVH 232
>sp|Q8WQ86|EB1_DICDI Microtubule-associated protein RP/EB family member 1
OS=Dictyostelium discoideum GN=eb1 PE=1 SV=1
Length = 506
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 1 MKRVKFRTNLEHEYIQNFKILQAAFKKMNVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDV 60
+K V F ++EYI+NF LQ +F K+ V+K V + +LVK R Q N EF QW KK+FD
Sbjct: 47 LKMVNFNAKYDYEYIKNFSYLQESFAKLGVEKYVEVSELVKSRPQANLEFAQWMKKYFDQ 106
Query: 61 NNTVADYDPVGAR 73
T Y+ + R
Sbjct: 107 YYTGEPYNAIERR 119
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 131 RVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIEVLCQEHEGETPVIQNILNI 190
++ S + E+ ++ + ++T+ +EK+RDFYF +LR+ E+ CQ+H + P++ +L I
Sbjct: 303 ELEEQKSVIQEMTEKIANFEITIQDIEKDRDFYFERLREAEIFCQDH-SDVPLLGEVLKI 361
Query: 191 LY 192
LY
Sbjct: 362 LY 363
>sp|Q2G222|Y2979_STAA8 N-acetylmuramoyl-L-alanine amidase domain-containing protein
SAOUHSC_02979 OS=Staphylococcus aureus (strain NCTC
8325) GN=SAOUHSC_02979 PE=1 SV=1
Length = 619
Score = 33.9 bits (76), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 39 LVKGRFQDNFEFLQWFKKFFDVNNTVADYDPVGARGGEAMGNGSVRSISATQIHKRTTPA 98
L K ++ DN+ + F++N+ ++DY+ R GE N S ++ S I T
Sbjct: 108 LTKNKYDDNYSLTTLIQNLFNLNSDISDYE--QPRNGEKSTNDSNKN-SDNSIKNDTDTQ 164
Query: 99 VAPRPVAPKQPVAKSTAAAPRAGLNSRGTP 128
+ + A Q KS P +P
Sbjct: 165 SSKQDKADNQKAPKSNNTKPSTSNKQPNSP 194
>sp|Q96X49|PACC_ACRCH pH-response transcription factor pacC/RIM101 OS=Acremonium
chrysogenum GN=pacC PE=1 SV=1
Length = 621
Score = 33.1 bits (74), Expect = 1.4, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 84 RSISATQIHKRTTPAVAP-RPVAPKQPVAKSTAAAPRAGLNSRGTPA 129
RS + I +R +P P P QPV+ +T A+P ++S GTPA
Sbjct: 361 RSSQSPPIAQRGSPGGMPVGPDGYHQPVSAATMASPLTAMSSTGTPA 407
>sp|Q9S2C8|NHAA2_STRCO Na(+)/H(+) antiporter NhaA 2 OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=nhaA2 PE=3 SV=1
Length = 629
Score = 32.0 bits (71), Expect = 2.9, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 142 LNSQMMDLKLTVDGLEKERDFYFGKLRD 169
+NS +M L V GLE RDF G+LRD
Sbjct: 83 INSGLMSLFFFVVGLEARRDFDMGELRD 110
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 12/72 (16%)
Query: 69 PVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVA--------PKQPVAKSTAAAPRA 120
PV R G+ G + S + Q + T A APRPVA P +PV +T P
Sbjct: 433 PVIDRAGQL--KGPITSSTPVQRVEPTVIAAAPRPVAVVTTSASSPSRPVVNTTKPKPST 490
Query: 121 G--LNSRGTPAG 130
G L++R P G
Sbjct: 491 GIILSTRNEPIG 502
>sp|Q9EPS3|GLCE_MOUSE D-glucuronyl C5-epimerase OS=Mus musculus GN=Glce PE=1 SV=2
Length = 618
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 24 AFKKMNVDKIVPIDKLVKGRFQDNFEFL--QWFKKFFDVNNTVADYD 68
K +D ++ + +KGR + N FL W +K+FDV V YD
Sbjct: 101 GLKYEEIDCLINDEHTIKGRREGNEVFLPFTWVEKYFDVYGKVVQYD 147
>sp|O18756|GLCE_BOVIN D-glucuronyl C5-epimerase OS=Bos taurus GN=GLCE PE=1 SV=2
Length = 617
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 24 AFKKMNVDKIVPIDKLVKGRFQDNFEFL--QWFKKFFDVNNTVADYD 68
K +D ++ + +KGR + N FL W +K+FDV V YD
Sbjct: 100 GLKYEEIDCLINDEHTIKGRREGNEVFLPFTWVEKYFDVYGKVVQYD 146
>sp|O94923|GLCE_HUMAN D-glucuronyl C5-epimerase OS=Homo sapiens GN=GLCE PE=1 SV=3
Length = 617
Score = 31.2 bits (69), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 24 AFKKMNVDKIVPIDKLVKGRFQDNFEFL--QWFKKFFDVNNTVADYD 68
K +D ++ + +KGR + N FL W +K+FDV V YD
Sbjct: 101 GLKYEEIDCLINDEHTIKGRREGNEVFLPFTWVEKYFDVYGKVVQYD 147
>sp|Q01029|PORTL_SHV21 Portal protein 43 OS=Saimiriine herpesvirus 2 (strain 11) GN=43
PE=3 SV=1
Length = 563
Score = 30.8 bits (68), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 131 RVDNNSSRVDELNSQMMDLKLTVDGLEKERDFYFGKLRDIE 171
V NN + L SQ+ + T++ LEKER+ Y GK+ IE
Sbjct: 354 HVSNNVFKC--LTSQINEQFDTINKLEKERELYLGKINQIE 392
>sp|P47974|TISD_HUMAN Zinc finger protein 36, C3H1 type-like 2 OS=Homo sapiens GN=ZFP36L2
PE=1 SV=3
Length = 494
Score = 30.4 bits (67), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 69 PVGARGGEAMGNGSVRSISATQIHKRTTPAVAPRPVAPKQPVA---KSTAAAPRAGLNSR 125
PV A G +R SA+ +H PA +P +PK P A S +A G S
Sbjct: 39 PVAAAPSSGFAPGFLRRHSASNLHALAHPAPSPGSCSPKFPGAANGSSCGSAAAGGPTSY 98
Query: 126 GT 127
GT
Sbjct: 99 GT 100
>sp|Q99M73|KRT84_MOUSE Keratin, type II cuticular Hb4 OS=Mus musculus GN=Krt84 PE=2 SV=2
Length = 603
Score = 30.4 bits (67), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 2 KRVKFRTNLEHEYIQNFKILQAAF-----KKMNVDKIVPIDKLVKGRFQDNFEFLQ 52
+ V FR N E+E++ K + AAF + NVD ++ + +K + + E LQ
Sbjct: 263 EEVVFRANAENEFVALKKDVDAAFLNKSDLEANVDTLIQETEFLKALYHEEIEMLQ 318
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,338,618
Number of Sequences: 539616
Number of extensions: 3370056
Number of successful extensions: 12532
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 12427
Number of HSP's gapped (non-prelim): 80
length of query: 205
length of database: 191,569,459
effective HSP length: 112
effective length of query: 93
effective length of database: 131,132,467
effective search space: 12195319431
effective search space used: 12195319431
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)