BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1263
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P22892|AP1G1_MOUSE AP-1 complex subunit gamma-1 OS=Mus musculus GN=Ap1g1 PE=1 SV=3
Length = 822
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 87/106 (82%), Positives = 98/106 (92%)
Query: 1 MCENSIDTLHHFKKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKND 60
MCE S D L HF+K+VP LVR LKNLI++GYSPEHDVSG+SDPFLQV+IL+LLRILG+ND
Sbjct: 201 MCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRND 260
Query: 61 VEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSESGLR 106
++SEAMNDILAQVATNTETSKNVGN ILYETVL+IMDIKSESGLR
Sbjct: 261 DDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLR 306
>sp|O43747|AP1G1_HUMAN AP-1 complex subunit gamma-1 OS=Homo sapiens GN=AP1G1 PE=1 SV=5
Length = 822
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 87/106 (82%), Positives = 98/106 (92%)
Query: 1 MCENSIDTLHHFKKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKND 60
MCE S D L HF+K+VP LVR LKNLI++GYSPEHDVSG+SDPFLQV+IL+LLRILG+ND
Sbjct: 201 MCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRND 260
Query: 61 VEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSESGLR 106
++SEAMNDILAQVATNTETSKNVGN ILYETVL+IMDIKSESGLR
Sbjct: 261 DDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLR 306
>sp|Q5R5M2|AP1G1_PONAB AP-1 complex subunit gamma-1 OS=Pongo abelii GN=AP1G1 PE=2 SV=1
Length = 822
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 97/106 (91%)
Query: 1 MCENSIDTLHHFKKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKND 60
MCE S D HF+K+VP LVR LKNLI++GYSPEHDVSG+SDPFLQV+IL+LLRILG+ND
Sbjct: 201 MCERSPDMPAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRND 260
Query: 61 VEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSESGLR 106
++SEAMNDILAQVATNTETSKNVGN ILYETVL+IMDIKSESGLR
Sbjct: 261 DDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLR 306
>sp|Q8I8U2|AP1G_DICDI AP-1 complex subunit gamma OS=Dictyostelium discoideum GN=ap1g1
PE=1 SV=1
Length = 895
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/106 (66%), Positives = 89/106 (83%)
Query: 1 MCENSIDTLHHFKKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKND 60
+CE + HFKK+VP LVR LK+L +GY PEHD+ GV+DPFLQVKIL+LLRILG+ND
Sbjct: 199 ICEMDSTQIIHFKKMVPQLVRILKSLTSSGYLPEHDIGGVTDPFLQVKILRLLRILGQND 258
Query: 61 VEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSESGLR 106
EAS+AMNDILAQV+TNT+++KNVGN ILYE V +IM I+SE+GL+
Sbjct: 259 PEASDAMNDILAQVSTNTDSTKNVGNAILYECVQTIMTIESENGLK 304
>sp|Q99128|AP1G1_USTMA AP-1 complex subunit gamma-1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=APL4 PE=3 SV=2
Length = 853
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 90/106 (84%)
Query: 1 MCENSIDTLHHFKKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKND 60
+C + L +++ VP LV++LK+L+ GYSPEHDVSG++DPFLQVKIL+LLRILGK +
Sbjct: 203 ICRQDDEALTVYRRAVPLLVQHLKSLVTTGYSPEHDVSGITDPFLQVKILRLLRILGKEN 262
Query: 61 VEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSESGLR 106
+ASE MNDILAQVATNTE SKNVGN+ILYETVL+I++I +++GLR
Sbjct: 263 AQASETMNDILAQVATNTEASKNVGNSILYETVLTILEIDADNGLR 308
>sp|O75843|AP1G2_HUMAN AP-1 complex subunit gamma-like 2 OS=Homo sapiens GN=AP1G2 PE=1
SV=1
Length = 785
Score = 149 bits (377), Expect = 3e-36, Method: Composition-based stats.
Identities = 69/106 (65%), Positives = 87/106 (82%)
Query: 1 MCENSIDTLHHFKKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKND 60
+CE S L HF+K+VP LV L+ L+ GYS EH +SGVSDPFLQV+IL+LLRILG+N
Sbjct: 202 LCERSPAALRHFRKVVPQLVHILRTLVTMGYSTEHSISGVSDPFLQVQILRLLRILGRNH 261
Query: 61 VEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSESGLR 106
E+SE MND+LAQVATNT+TS+N GN +L+ETVL+IMDI+S +GLR
Sbjct: 262 EESSETMNDLLAQVATNTDTSRNAGNAVLFETVLTIMDIRSAAGLR 307
>sp|O88512|AP1G2_MOUSE AP-1 complex subunit gamma-like 2 OS=Mus musculus GN=Ap1g2 PE=2
SV=2
Length = 791
Score = 142 bits (359), Expect = 5e-34, Method: Composition-based stats.
Identities = 67/106 (63%), Positives = 85/106 (80%)
Query: 1 MCENSIDTLHHFKKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKND 60
+CE + L HF+K+VP LV+ L+ L+ GYS EH +SGVSDPFLQV+IL+LLRILG+N
Sbjct: 202 LCERNPAALRHFRKVVPQLVQILRTLVTTGYSTEHSISGVSDPFLQVQILRLLRILGRNH 261
Query: 61 VEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSESGLR 106
E+SE MND+LAQVATNT+TS+N GN +L ETVL+IM I S +GLR
Sbjct: 262 EESSETMNDLLAQVATNTDTSRNAGNAVLLETVLTIMAIHSAAGLR 307
>sp|Q9ZUI6|AP1G2_ARATH AP-1 complex subunit gamma-2 OS=Arabidopsis thaliana GN=At1g60070
PE=2 SV=2
Length = 862
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 81/107 (75%), Gaps = 1/107 (0%)
Query: 1 MCENSIDTLHHF-KKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKN 59
+C+ S + L +F KK LV+ L+++ + YSPE+DV+G++DPFL +++LKLLR+LG+
Sbjct: 204 ICKVSSEALEYFRKKCTEGLVKTLRDIANSPYSPEYDVAGITDPFLHIRLLKLLRVLGQG 263
Query: 60 DVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSESGLR 106
D +AS+ MNDILAQVA+ TE++KN GN ILYE V +IM I+ GLR
Sbjct: 264 DADASDCMNDILAQVASKTESNKNAGNAILYECVQTIMSIEENGGLR 310
>sp|Q9UU81|AP1G1_SCHPO AP-1 complex subunit gamma-1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=apl4 PE=3 SV=1
Length = 865
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 75/114 (65%)
Query: 2 CENSIDTLHHFKKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKNDV 61
C+ + + F+ +L+ ++ L + YS EH++ +SDPFLQVKIL+ L ILG+N+
Sbjct: 230 CKINPSLISRFESQADDLIYRIRQLSTSTYSSEHNIGNISDPFLQVKILQFLSILGQNNP 289
Query: 62 EASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSESGLRSFFTTFTAK 115
+ + M+D+LAQV TNT++S+N GN ILY+ V +I+D+ S+S LR AK
Sbjct: 290 KIYDKMSDLLAQVCTNTDSSRNAGNAILYQAVRTILDLNSDSSLRVLGVNILAK 343
>sp|Q84K16|AP1G1_ARATH AP-1 complex subunit gamma-1 OS=Arabidopsis thaliana GN=GAMMA-ADR
PE=1 SV=1
Length = 876
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Query: 1 MCENSIDTLHHFK-KIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKN 59
+C + + L +F+ K L++ L+++ + Y PE+DV+G++DPFL +++L+LLR+LG+
Sbjct: 204 LCTINDEALEYFRTKCTEGLIKTLRDITNSAYQPEYDVAGITDPFLHIRLLRLLRVLGQG 263
Query: 60 DVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSESGLR 106
D +AS+ M DILAQVAT TE++KN GN +LYE V +IM I+ + LR
Sbjct: 264 DADASDLMTDILAQVATKTESNKNAGNAVLYECVETIMAIEDTNSLR 310
>sp|Q12028|AP1G1_YEAST AP-1 complex subunit gamma-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=APL4 PE=1 SV=1
Length = 832
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 7 DTLHHFKKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRI-------LGKN 59
D L ++ + L+N+ P +DV G+ DPFLQ +I+ L++ L N
Sbjct: 229 DILSPLSLLLRDFFIRLENMNSKNIEPGYDVQGICDPFLQCEIIYTLKLYFQVGELLNSN 288
Query: 60 DV-EASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSESGLRSFFTTFTAK 115
+V + + D+L ++ATNT+++KN G ILYETV +I + LR AK
Sbjct: 289 NVLDYKDNFCDLLTRIATNTDSTKNSGQAILYETVKTIFSLDLNQPLRVLGINILAK 345
>sp|Q8L7A9|AP4E_ARATH AP-4 complex subunit epsilon OS=Arabidopsis thaliana GN=At1g31730
PE=1 SV=1
Length = 938
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 12 FKKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKNDVEASEAMNDIL 71
+K +V + V LK + +D + PF+Q+K+LK++ +LG D AS+ M+ +L
Sbjct: 229 YKDLVSSFVSILKQVTERRLPKSYDYHQMPAPFIQIKLLKIMALLGSGDKNASDIMSMVL 288
Query: 72 AQVATNTETSKNVGNTILYETVLSI 96
+ ++S N+GN ILYE + I
Sbjct: 289 GDLFRKCDSSTNIGNAILYECIRCI 313
>sp|Q9UPM8|AP4E1_HUMAN AP-4 complex subunit epsilon-1 OS=Homo sapiens GN=AP4E1 PE=1 SV=2
Length = 1137
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%)
Query: 12 FKKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKNDVEASEAMNDIL 71
+K + + V LK ++ E + V P+LQ+++L++L +LGK+D SE M D+L
Sbjct: 240 YKDLTGSFVTILKQVVGGKLPVEFNYHSVPAPWLQIQLLRILGLLGKDDQRTSELMYDVL 299
Query: 72 AQVATNTETSKNVGNTILYETVLSIMDIKSESGL 105
+ E + NV IL+E V ++ I +S L
Sbjct: 300 DESLRRAELNHNVTYAILFECVHTVYSIYPKSEL 333
>sp|Q80V94|AP4E1_MOUSE AP-4 complex subunit epsilon-1 OS=Mus musculus GN=Ap4e1 PE=2 SV=3
Length = 1122
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%)
Query: 12 FKKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKNDVEASEAMNDIL 71
+K + + V LK ++ E V P+LQ+++L++L +LGK+D SE M D+L
Sbjct: 239 YKDLTESFVTILKQVVGGKLPVEFSYHSVPAPWLQIQLLRILGLLGKDDERTSELMYDVL 298
Query: 72 AQVATNTETSKNVGNTILYETVLSIMDIKSESGL 105
+ E + NV IL+E V +I I +S L
Sbjct: 299 DESLRRAELNHNVTYAILFECVHTIYSIYPKSEL 332
>sp|Q54VE0|AP4E_DICDI AP-4 complex subunit epsilon OS=Dictyostelium discoideum GN=ap4e1
PE=3 SV=1
Length = 1080
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 12 FKKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKNDVEASEAMNDIL 71
K++VP+ V LK + + G+ P+LQ+ +LKLL LG D ++S M +L
Sbjct: 276 LKELVPSFVGILKQVAEGRLPNSYIYHGIHHPWLQINLLKLLSNLGYQDKDSSNHMYTVL 335
Query: 72 AQVATNTETSK-NVGNTILYETV 93
++ K NVG ILYET+
Sbjct: 336 LFTMQQSQKFKNNVGFAILYETI 358
>sp|Q86KI1|AP2A2_DICDI AP-2 complex subunit alpha-2 OS=Dictyostelium discoideum GN=ap2a1-1
PE=3 SV=1
Length = 989
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 12 FKKIVPNLVRNLKNLILAGYSP-EHDVSGVSDPFLQVKILKLLRIL-GKNDVEASEAMND 69
++ +P ++ LK +I+ P E+ V+ P+LQVK+LK LR +D + + + +
Sbjct: 227 WEPAIPKVIHLLKKIIINKEFPKEYVYYHVTCPWLQVKLLKFLRYFPAPDDSQGGKVLGE 286
Query: 70 ILAQVATNTETS-------KNVGNTILYETV 93
IL V +E++ KN N +L+E +
Sbjct: 287 ILTAVFAQSESAKAGTVNHKNSLNAVLFEAI 317
>sp|Q8LPK4|AP2A2_ARATH AP-2 complex subunit alpha-2 OS=Arabidopsis thaliana GN=ALPHAC-AD
PE=1 SV=1
Length = 1013
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 12 FKKIVPNLVRNLKNLILAGYSP-EHDVSGVSDPFLQVKILKLLRILGK-NDVEASEAMND 69
+ +P V+ L+ L P E+ G+ P+LQVK ++ L+ D +A+ +
Sbjct: 216 YSSCLPKCVKILERLARNQDVPQEYTYYGIPSPWLQVKAMRALQYFPTIEDPSTRKALFE 275
Query: 70 ILAQVATNTETSKNV-----GNTILYETVLSIMDIKSESGLRS 107
+L ++ T+ KNV + +L+E + +M + +E + S
Sbjct: 276 VLQRILMGTDVVKNVNKNNASHAVLFEALSLVMHLDAEKEMMS 318
>sp|Q8LPL6|AP2A1_ARATH AP-2 complex subunit alpha-1 OS=Arabidopsis thaliana GN=ALPHA-ADR
PE=1 SV=1
Length = 1012
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 12 FKKIVPNLVRNLKNLILAGYSP-EHDVSGVSDPFLQVKILKLLRILGK-NDVEASEAMND 69
+ +P V+ L+ L P E+ G+ P+LQVK ++ L+ D +A+ +
Sbjct: 216 YSSCLPKCVKILERLARNQDVPQEYTYYGIPSPWLQVKAMRALQYFPTIEDPSTRKALFE 275
Query: 70 ILAQVATNTETSKNV-----GNTILYETVLSIMDIKSESGLRS 107
+L ++ T+ KNV + +L+E + +M + +E + S
Sbjct: 276 VLQRILMGTDVVKNVNKNNASHAVLFEALSLVMHLDAEKEMMS 318
>sp|P34643|YOQ5_CAEEL Uncharacterized protein ZK512.5 OS=Caenorhabditis elegans
GN=ZK512.5 PE=3 SV=1
Length = 1232
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 4 NSIDTLHHFK----KIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRILGKN 59
+ + T HF K++ + V+N K ++AG +P H V ++Q +I L +I
Sbjct: 411 DDLKTFLHFDEQSGKVIES-VQNFKGPLIAGQTPTHSVR----LYIQRQIDALRQIRNAG 465
Query: 60 DVEASEAMNDIL 71
DV+ SE ++ +L
Sbjct: 466 DVKKSEVVDALL 477
>sp|O95782|AP2A1_HUMAN AP-2 complex subunit alpha-1 OS=Homo sapiens GN=AP2A1 PE=1 SV=3
Length = 977
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 1 MCENSIDTLHHFKKIVPNLVRNLKNLILAGYSPEHDVSG--VSDPFLQVKILKLLRILGK 58
+C+ + D FK V V L ++ + + D + V P+L VK+L+LL+
Sbjct: 214 LCKKNPD---DFKTCVSLAVSRLSRIVSSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPP 270
Query: 59 NDVEAS-----EAMNDILAQVATNTETSK----NVGNTILYETVLSIMDIKSESGL 105
+ A E + +L + ++ K N N IL+ET+ I+ SE L
Sbjct: 271 PEDAAVKGRLVECLETVLNKAQEPPKSKKVQHSNAKNAILFETISLIIHYDSEPNL 326
>sp|Q94KB2|MLO13_ARATH MLO-like protein 13 OS=Arabidopsis thaliana GN=MLO13 PE=2 SV=1
Length = 478
Score = 28.9 bits (63), Expect = 8.6, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 10 HHFKKIVPNLVRNLKNLILAGYSPEHDVSGVSDPFLQVKILKLLRIL 56
HH K +++ N ++L+ G SP+H + P + V+ L L I
Sbjct: 101 HHAPKSSHSIINNARHLLSTGESPDHCAAKGQVPLVSVEALHQLHIF 147
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,416,929
Number of Sequences: 539616
Number of extensions: 1257688
Number of successful extensions: 3748
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3728
Number of HSP's gapped (non-prelim): 27
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)