BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12630
(160 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|322801573|gb|EFZ22229.1| hypothetical protein SINV_11095 [Solenopsis invicta]
Length = 207
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 121/160 (75%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA++G+SGDT QF+E+I KNIQLYKMRNGYELSP+AAA +TR+ LA+YLRSR+PY NML
Sbjct: 44 MAISGESGDTTQFSEYIGKNIQLYKMRNGYELSPKAAACFTRRNLADYLRSRTPYFVNML 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D + GP+L+FIDYLAS + +PY THGY G+ ++S++ Y++
Sbjct: 104 LAGYDDDSGPELYFIDYLASCVRVPYATHGYGGMFSMSVLDRYYKYDCTEEEAYVLLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+QKRLI+N+PNFKV +SKDGIK + PI A+N+ E+
Sbjct: 164 VREIQKRLIVNLPNFKVQKISKDGIKDMQPITAENLAVES 203
>gi|66519157|ref|XP_393468.2| PREDICTED: proteasome subunit beta type-2-like isoform 1 [Apis
mellifera]
Length = 207
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 92/160 (57%), Positives = 119/160 (74%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MAV+G+SGDT QF+E+I KNIQLYKMRNGYELSP+AAA +TR+ LA+YLRSR+PY N+L
Sbjct: 44 MAVSGESGDTTQFSEYIGKNIQLYKMRNGYELSPKAAALFTRRNLADYLRSRTPYFVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D GP+L+FIDYLAS +++PY +HGY G +LSI+ YH+
Sbjct: 104 MAGYDDNTGPELYFIDYLASCVKVPYASHGYGGFFSLSILDRYHKYDSTEEEAYTLMKRC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+ KRLI+N+PNFKV VSK+GIK L PI AKN+ E+
Sbjct: 164 VREIHKRLIVNLPNFKVQKVSKEGIKELEPITAKNLAIED 203
>gi|380015922|ref|XP_003691943.1| PREDICTED: proteasome subunit beta type-2-like [Apis florea]
Length = 207
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 92/160 (57%), Positives = 119/160 (74%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MAV+G+SGDT QF+E+I KNIQLYKMRNGYELSP+AAA +TR+ LA+YLRSR+PY N+L
Sbjct: 44 MAVSGESGDTTQFSEYIGKNIQLYKMRNGYELSPKAAALFTRRNLADYLRSRTPYFVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D GP+L+FIDYLAS +++PY +HGY G +LSI+ YH+
Sbjct: 104 MAGYDDNTGPELYFIDYLASCVKVPYASHGYGGFFSLSILDRYHKYDSTEEEAYTLMKRC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+ KRLI+N+PNFKV VSK+GIK L PI AKN+ E+
Sbjct: 164 VREIHKRLIVNLPNFKVQKVSKEGIKELEPITAKNLAIED 203
>gi|340721459|ref|XP_003399137.1| PREDICTED: proteasome subunit beta type-2-like [Bombus terrestris]
gi|350406548|ref|XP_003487808.1| PREDICTED: proteasome subunit beta type-2-like [Bombus impatiens]
Length = 207
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/160 (57%), Positives = 118/160 (73%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MAV+G+SGDT QF+E+I KNIQLYKMRNGYELSP+AAA +TR+ LA+YLRSR+PY N+L
Sbjct: 44 MAVSGESGDTTQFSEYIGKNIQLYKMRNGYELSPKAAASFTRRNLADYLRSRTPYFVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D GP+L+FIDYLAS +++PY HGY G +LSI+ YH+
Sbjct: 104 MAGYDVNSGPELYFIDYLASCVKVPYAAHGYGGFFSLSILDRYHKYDSTEEEAYILLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+ KRLI+N+PNFKV VSK+GIK L PI AKN+ E+
Sbjct: 164 VREIHKRLIVNLPNFKVQKVSKEGIKELEPITAKNLAIED 203
>gi|307198388|gb|EFN79330.1| Proteasome subunit beta type-2 [Harpegnathos saltator]
Length = 207
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 120/160 (75%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+SGDT QF+E+I KNIQLYKMRNGYELSP+AAA +TR+ LA+YLRSR+PY NML
Sbjct: 44 MATSGESGDTTQFSEYIGKNIQLYKMRNGYELSPKAAACFTRRNLADYLRSRTPYFVNML 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D + GP+L+FIDYLAS +++PY THGY G+ ++S++ Y++
Sbjct: 104 MAGYDDDAGPELYFIDYLASCVKVPYATHGYGGMFSMSVLDRYYKHDCTEQEAYALLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+ KRLI+++PNFKV VSKDGIK + PI A+NI EN
Sbjct: 164 VQEIHKRLIVSLPNFKVQKVSKDGIKDMQPITAENIAIEN 203
>gi|332017895|gb|EGI58555.1| Proteasome subunit beta type-2 [Acromyrmex echinatior]
Length = 207
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 120/160 (75%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA++G+SGDT QF+E+I KNIQLYKMRNGYELSP+AAA +TR+ LA+YLRSR+PY NML
Sbjct: 44 MAISGESGDTTQFSEYIGKNIQLYKMRNGYELSPKAAACFTRRNLADYLRSRTPYFVNML 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D + G +L+FIDYLAS +++PY THGY G+ ++S++ YH+
Sbjct: 104 LAGYDDDLGAELYFIDYLASCVKVPYATHGYGGMFSMSVLDRYHKYNCTEEEAYALLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+QKRLI+N+PNFKV +SKDGIK + PI +N+ E+
Sbjct: 164 VREIQKRLIVNLPNFKVQKISKDGIKDMQPITTENLAVES 203
>gi|156541240|ref|XP_001600736.1| PREDICTED: proteasome subunit beta type-2-like [Nasonia
vitripennis]
Length = 207
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 117/160 (73%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MAV+G+SGD QF+E+I+KN+QLYKMRNGYELSP+AAA +TR+ LA+YLRSR+PY NML
Sbjct: 44 MAVSGESGDATQFSEYISKNLQLYKMRNGYELSPKAAANFTRRNLADYLRSRTPYFVNML 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D GP+L+FIDYLAS +++PY HGY G +L+I+ YHR
Sbjct: 104 MAGYDDHTGPELYFIDYLASCVKVPYAAHGYGGFFSLTILDRYHRDNLTEEEGYALLKKC 163
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+ KRLI+N+PNFKV +SKDGI LP I A+N+ E+
Sbjct: 164 VREIHKRLIVNLPNFKVQKISKDGITDLPHITAQNLAVED 203
>gi|383864554|ref|XP_003707743.1| PREDICTED: proteasome subunit beta type-2-like [Megachile
rotundata]
Length = 207
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 115/160 (71%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MAV+G SGDT+QF+E+I KNIQLYKMRNGYELSP+AAA +TR+ LA+YLRS +PY N+L
Sbjct: 44 MAVSGQSGDTIQFSEYIGKNIQLYKMRNGYELSPKAAASFTRRNLADYLRSTTPYFVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D GP+L+FIDYLAS + +PY HGY G +LSI+ YH+
Sbjct: 104 MAGYDNNNGPELYFIDYLASCVRVPYAAHGYGGFFSLSILDRYHKYDSTEEEAYILMKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+ KRLI+N+PNFKV VSKDGIK L PI AK + E+
Sbjct: 164 VREIHKRLIVNLPNFKVQKVSKDGIKELEPITAKVLAMED 203
>gi|260793493|ref|XP_002591746.1| hypothetical protein BRAFLDRAFT_123512 [Branchiostoma floridae]
gi|229276956|gb|EEN47757.1| hypothetical protein BRAFLDRAFT_123512 [Branchiostoma floridae]
Length = 201
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 109/157 (69%), Gaps = 16/157 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M TG+SGDTVQFAE+I KNIQLYKMRNGY LSP AAA +TRK +A+YLRS +PY N+L
Sbjct: 44 MGCTGESGDTVQFAEYIQKNIQLYKMRNGYTLSPHAAANFTRKNMADYLRSSTPYFVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
IAGHD GPQL+F+DYLASL ++P+ HGY G LSI +Y+R
Sbjct: 104 IAGHDETAGPQLYFLDYLASLNKVPFAAHGYGGFFVLSIFDKYYREDMTKDEAVELLHKA 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIP 141
+E+QKR I+N+P F V MV KDGI L PI A+ IP
Sbjct: 164 IAEIQKRFIVNLPTFSVRMVDKDGIHDLEPIPARPIP 200
>gi|357624159|gb|EHJ75038.1| hypothetical protein KGM_19166 [Danaus plexippus]
Length = 205
Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 113/156 (72%), Gaps = 16/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M V GDSGDT QFAE+IAKNIQLYKMRNGYEL P AAA +TR+ LAEYLRS +PY N+L
Sbjct: 49 MGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAANFTRRNLAEYLRSSTPYFVNLL 108
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G+D E GP+L+F+DYLAS +++P+ HG+ G ++LSIM YH+
Sbjct: 109 MGGYDKENGPELYFMDYLASSMKVPFAAHGFGGYLSLSIMDRYHKKDATEEEAYEILKKC 168
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
EV KRL +++PNF+VT+V++DGIK LP I + ++
Sbjct: 169 VQEVHKRLFVSLPNFQVTVVNRDGIKVLPVINSASL 204
>gi|242019946|ref|XP_002430419.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
gi|212515549|gb|EEB17681.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
Length = 206
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 113/162 (69%), Gaps = 17/162 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MAV GDSGDT QF+EFI+KNIQLYKMRNGY LSP AA+ +TR+ LA+YLRSR+PYN N+L
Sbjct: 44 MAVCGDSGDTSQFSEFISKNIQLYKMRNGYALSPSAASNFTRRNLADYLRSRTPYNVNLL 103
Query: 61 IAGHDPEEGP-QLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------- 106
+ G+D +L+F DYLASL++ PY HG+ G LSIM + HR
Sbjct: 104 LGGYDDTTDEFELYFCDYLASLVKTPYAVHGFGGHFCLSIMDQLHRKDLTIEEGYEVLSK 163
Query: 107 ---EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEENK 145
E+ KR++IN+PNFKV +V+++GIK+L PI A + E+K
Sbjct: 164 CIREIHKRVVINLPNFKVQVVTRNGIKNLEPITAAKLARESK 205
>gi|332373238|gb|AEE61760.1| unknown [Dendroctonus ponderosae]
Length = 200
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 115/156 (73%), Gaps = 16/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MAV+G+SGDT QFAE+IAKNIQLYKMRN YELSP+ A+ +TR+ LA+ LR+RSPY N+L
Sbjct: 44 MAVSGESGDTTQFAEYIAKNIQLYKMRNTYELSPKEASSFTRRILADTLRTRSPYMVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGE-YHRS------------- 106
+AG+D +EGPQLF++D+LAS+ ++ Y HGY G +LSIM Y ++
Sbjct: 104 LAGYDEKEGPQLFYMDHLASVAKVDYAAHGYGGFFSLSIMDRNYLKTMTQEQGYELMKKC 163
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
EVQKRLIIN+PNFKV +V K+GIK +P I AK+
Sbjct: 164 VEEVQKRLIINLPNFKVQIVDKNGIKDMPDITAKSF 199
>gi|443691508|gb|ELT93338.1| hypothetical protein CAPTEDRAFT_176004 [Capitella teleta]
Length = 199
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/152 (55%), Positives = 111/152 (73%), Gaps = 16/152 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MAV+G+SGDTVQFAE+IAKNIQLYKMRNGYELSP AAA +TRK +A++LRSR+PY N+L
Sbjct: 44 MAVSGESGDTVQFAEYIAKNIQLYKMRNGYELSPHAAANFTRKNMADFLRSRTPYMVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG D E+GP LFF+DYLASL+E+PY HGY ++L I+ +++R
Sbjct: 104 MAGFDEEKGPSLFFMDYLASLVEVPYGIHGYGSYLSLGILDKFYREDLNREEVLELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIK 136
E++KR I+N+ FK+ +V KDG+ L IK
Sbjct: 164 VQEIEKRFIVNLGTFKIKIVDKDGVHVLDDIK 195
>gi|121511942|gb|ABM55422.1| proteasome beta 2 subunit-like protein [Xenopsylla cheopis]
Length = 200
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 110/156 (70%), Gaps = 16/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G+SGDT QFAE+IAKNIQLYKMRNGY +S +AA +TR+ LA+ LRSR+ Y+ NML
Sbjct: 44 MGINGESGDTTQFAEYIAKNIQLYKMRNGYSVSTVSAANFTRRNLADALRSRNAYHVNML 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
I GHD E GPQL+F+DYL + + +PY HGY G +LSIM Y+R
Sbjct: 104 IGGHDKEGGPQLYFMDYLGACVSLPYACHGYGGFFSLSIMDRYYRSDMSQEEAYAIIKRC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
SE+ KRLIIN+PNFKV +V ++GIK+LP I K++
Sbjct: 164 ISEIHKRLIINLPNFKVVVVDENGIKYLPIITPKDL 199
>gi|321458597|gb|EFX69663.1| hypothetical protein DAPPUDRAFT_300859 [Daphnia pulex]
Length = 201
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 114/156 (73%), Gaps = 16/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MAVTG+SGDT QFAE+I KNIQLYKMRNGYELSP AAA +TR+ LA+ LRSRSPY N L
Sbjct: 44 MAVTGESGDTTQFAEYIEKNIQLYKMRNGYELSPPAAANFTRRNLADSLRSRSPYMVNFL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+ GP+L+++DYLAS+I+ P+ THGY G+ ++ IM Y+R
Sbjct: 104 LAGYSERTGPELYWMDYLASMIKTPFATHGYGGMFSIGIMDRYYRPDLTEQEAYDIMKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
+E+QKRLIIN+PNF+V ++ K+GI L I+++N+
Sbjct: 164 VAEIQKRLIINLPNFQVKVLDKNGIHALDVIRSQNL 199
>gi|389612321|dbj|BAM19664.1| proteasome subunit beta type [Papilio xuthus]
Length = 157
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 112/156 (71%), Gaps = 16/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M V GDSGDT QFAE+IAKNIQLYKMRNGYEL P AAA +TR+ LAEYLRS SPY N+L
Sbjct: 1 MGVVGDSGDTTQFAEYIAKNIQLYKMRNGYELGPTAAANFTRRNLAEYLRSSSPYFVNIL 60
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G+D E GP+L+F+DYLAS I++P+ HG+ G ++LS+M Y++
Sbjct: 61 MGGYDMENGPELYFMDYLASSIKVPFAAHGFGGYLSLSVMDRYYKKDLTEKEAYEILQKC 120
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
EV KRL +++PNF+VT+V +DGI+ LP I + ++
Sbjct: 121 VQEVHKRLFVSLPNFQVTVVKRDGIEVLPVINSSSL 156
>gi|405954435|gb|EKC21877.1| Proteasome subunit beta type-2 [Crassostrea gigas]
Length = 208
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/152 (54%), Positives = 108/152 (71%), Gaps = 16/152 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M V+G+SGDTVQFAEFI+KNIQLYKMRNGY+LSP AAA +TRK LA+YLRSR+PY N+L
Sbjct: 44 MLVSGESGDTVQFAEFISKNIQLYKMRNGYDLSPSAAANFTRKNLADYLRSRTPYMVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+F+DYLAS+ + P+ HGY +L+I+ Y+
Sbjct: 104 MAGYDKNEGPSLYFMDYLASMNKCPFAAHGYGAFFSLAILDRYYTEDVTRARAVELLTMC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIK 136
E+++R IIN+P F+V +V KDGI LP IK
Sbjct: 164 VEEIKRRFIINLPAFRVRIVDKDGIHELPTIK 195
>gi|157128593|ref|XP_001655145.1| proteasome subunit beta type [Aedes aegypti]
gi|108882209|gb|EAT46434.1| AAEL002401-PA [Aedes aegypti]
Length = 206
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 111/159 (69%), Gaps = 16/159 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA G++GD VQF E+I+KNI LYKMRNGYEL P++AA++TRK LA+YLRSR+PY N+L
Sbjct: 44 MATIGEAGDRVQFTEYISKNILLYKMRNGYELGPKSAAHFTRKNLADYLRSRTPYQVNVL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G+D +G QL +IDYLA+ + + Y HGY G+ SI+ YH
Sbjct: 104 VGGYDEADGAQLHYIDYLANSLPVKYAAHGYGGLFVSSILDRYHHAKITQDEAYEILKKG 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEE 143
+E+QKRLIIN+PNFKV+++ KDGIK L I A+++ EE
Sbjct: 164 VAEIQKRLIINLPNFKVSVIDKDGIKELKDITAESLKEE 202
>gi|194766351|ref|XP_001965288.1| GF24340 [Drosophila ananassae]
gi|190617898|gb|EDV33422.1| GF24340 [Drosophila ananassae]
Length = 205
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 107/159 (67%), Gaps = 16/159 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ G+SGDT QF EFI+KNI LYKMRNGY+LSP AAA++TRK LAEYLRSR+PY M
Sbjct: 44 ISTIGESGDTEQFTEFISKNIALYKMRNGYDLSPHAAAHFTRKNLAEYLRSRTPYQVFMF 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+DP +GP+L FIDYLAS + Y HGY I SI Y
Sbjct: 104 VAGYDPNDGPELTFIDYLASAKSVNYAGHGYGAIFASSIYDRYWHPKITQDEAYDVLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEE 143
E+QKRL+IN+PNF V++V KDG+K+L PI AK++ E
Sbjct: 164 VVEIQKRLVINLPNFNVSVVDKDGVKNLDPITAKSLAAE 202
>gi|170029272|ref|XP_001842517.1| proteasome subunit beta type 2 [Culex quinquefasciatus]
gi|167881620|gb|EDS45003.1| proteasome subunit beta type 2 [Culex quinquefasciatus]
Length = 205
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 110/158 (69%), Gaps = 16/158 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA G+ GD VQF E+I+KNI LYKMRNGYEL P++AA++TRK LA+YLRSR+PY N+L
Sbjct: 44 MATIGEPGDRVQFTEYISKNILLYKMRNGYELGPKSAAHFTRKNLADYLRSRTPYQVNVL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G+D +G QL +IDYLA+ + + Y HGY G+ SI+ YH
Sbjct: 104 VGGYDEADGAQLHYIDYLANSLPVKYAAHGYGGLFVSSILDRYHHEKITQEEAYEIMKKG 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPE 142
+E+QKRLIIN+PNFKV+++ KDGIK LP I A+++ E
Sbjct: 164 VAEIQKRLIINLPNFKVSVIGKDGIKELPVISAESLKE 201
>gi|195433599|ref|XP_002064798.1| GK15122 [Drosophila willistoni]
gi|194160883|gb|EDW75784.1| GK15122 [Drosophila willistoni]
Length = 207
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 107/158 (67%), Gaps = 16/158 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ TG+SGDT QF EFI+KNI LYKMRNGY+LSPRAAA++TRK LAEYLRSR+PY M
Sbjct: 44 ISTTGESGDTDQFTEFISKNISLYKMRNGYDLSPRAAAHFTRKNLAEYLRSRTPYQVFMF 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+ G+DP+EGP+L FIDYLA+ + Y HGY I SI Y
Sbjct: 104 VGGYDPQEGPELTFIDYLATAKSVNYAGHGYGSIFCSSIYDRYWHPNITQEEAYDVFKKC 163
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPE 142
E+QKRL++N+ NF V +V KDG+++L PI AK++ +
Sbjct: 164 VLEIQKRLVVNLKNFTVAVVDKDGVRNLEPISAKSLSD 201
>gi|390349452|ref|XP_003727222.1| PREDICTED: proteasome subunit beta type-2-like [Strongylocentrotus
purpuratus]
Length = 201
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 107/154 (69%), Gaps = 16/154 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M G+SGDTVQFAE+I KNIQLYK+RNGYELSP+AAA +TRK LA++LRS++PY N+L
Sbjct: 44 MLCAGESGDTVQFAEYIQKNIQLYKIRNGYELSPKAAANFTRKNLADFLRSKTPYQVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AGHD +GP LF++DYL SL ++P+ HGY TLSI+ ++R
Sbjct: 104 LAGHDETDGPCLFYMDYLGSLQQVPFAAHGYGSYFTLSILDRHYRRDMTRDQAVEVLKKC 163
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAK 138
EVQKR I+N+P F++ +V KDGI LP + K
Sbjct: 164 LLEVQKRFIVNLPTFQIRIVDKDGIHELPNLPLK 197
>gi|442750345|gb|JAA67332.1| Putative 20s proteasome regulatory subunit beta type psmb2/pre1
[Ixodes ricinus]
Length = 202
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 111/159 (69%), Gaps = 19/159 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MAV G++GDTVQFAEFIAKNIQLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 44 MAVCGEAGDTVQFAEFIAKNIQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYSVNLL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------- 106
+AG D + P+LF++DYLA++ ++PY HGY +S++ Y+R
Sbjct: 104 LAGFDKQAAQPELFYMDYLATMAKVPYGAHGYGAFFLISVLDRYYREDMNEEEAVDLLKK 163
Query: 107 ---EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPE 142
EVQKR ++N+P FKV +V K+GI+ L I +PE
Sbjct: 164 CVFEVQKRFLVNLPAFKVQLVDKNGIRTLKDISV--LPE 200
>gi|91086657|ref|XP_967917.1| PREDICTED: similar to proteasome beta 2 subunit-like protein
[Tribolium castaneum]
gi|270009752|gb|EFA06200.1| hypothetical protein TcasGA2_TC009049 [Tribolium castaneum]
Length = 202
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 110/158 (69%), Gaps = 16/158 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA+ G+ GDT QFAE+IAKN+QLYKMRN YELSP+ A+++TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 MAIAGEQGDTNQFAEYIAKNVQLYKMRNNYELSPKEASHFTRRILADNLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D +EGPQL+F+DYLAS+ + Y HGY G +LSIM +
Sbjct: 104 LAGYDNQEGPQLYFMDYLASVASVDYAAHGYGGYFSLSIMDRNYLPTMTKDQGYELLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPE 142
EV RLI+N+PNFKV +V KDG+ +P I +++ +
Sbjct: 164 VKEVHTRLIVNLPNFKVQVVDKDGVHDMPTITLESLKD 201
>gi|156359803|ref|XP_001624954.1| predicted protein [Nematostella vectensis]
gi|156211762|gb|EDO32854.1| predicted protein [Nematostella vectensis]
Length = 197
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 106/155 (68%), Gaps = 17/155 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M VTG+SGDT QFAE+I KN+QLYKMRNGY+L+P AAA +TR+ LAEYLRSR+PY N+L
Sbjct: 44 MLVTGESGDTAQFAEYIEKNVQLYKMRNGYDLTPHAAANFTRRTLAEYLRSRTPYMVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AGH EGP L+ +DYLA+L ++P+ HGY LSIM Y +
Sbjct: 104 LAGHSSNEGPALYHMDYLAALSKVPFAAHGYGSFFVLSIMDRYFKPNMTKDQALELLERC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKN 139
+EVQKR I+N+PNF V +V KDGI H + A+N
Sbjct: 164 TNEVQKRFIVNLPNFTVRVVDKDGI-HDVKVPAQN 197
>gi|29841035|gb|AAP06048.1| similar to NM_017284 proteasome (prosome, macropain) subunit, beta
type, 2 in Rattus norvegicus [Schistosoma japonicum]
gi|226471306|emb|CAX70734.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
gi|226471308|emb|CAX70735.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
gi|226489230|emb|CAX75759.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
gi|226489232|emb|CAX75760.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
gi|226489234|emb|CAX75761.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
Length = 201
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 106/150 (70%), Gaps = 16/150 (10%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
AV G+SGDT QF+EFI +N+QLY++RNGYEL+P AAA +TR +AE LRSRSPY N+LI
Sbjct: 45 AVCGESGDTSQFSEFIQQNMQLYEIRNGYELTPNAAANFTRNNMAESLRSRSPYFVNLLI 104
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR---------------- 105
AG D GP+L+F+DYLASLI++P+ HGY +V+LSI+ HR
Sbjct: 105 AGFDSHTGPELYFLDYLASLIKVPFAVHGYGALVSLSILDRMHRPDMTVDEAVALLRLCI 164
Query: 106 SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
EVQKRL+IN+ + V +V+KDGI+ LP +
Sbjct: 165 QEVQKRLVINLDRYMVRIVTKDGIEELPDL 194
>gi|256084819|ref|XP_002578623.1| proteasome subunit beta 2 (T01 family) [Schistosoma mansoni]
gi|360045145|emb|CCD82693.1| proteasome subunit beta 2 (T01 family) [Schistosoma mansoni]
Length = 201
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 108/157 (68%), Gaps = 16/157 (10%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
AV G+SGDT QF+EFI +N+QLY++RNGYEL+P AAA +TR +AE LRSRSPY N+LI
Sbjct: 45 AVCGESGDTSQFSEFIQQNMQLYEIRNGYELTPSAAANFTRNNMAESLRSRSPYFVNLLI 104
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR---------------- 105
AG D + GP+L+++DYLASLI++P+ HGY +V LSI+ HR
Sbjct: 105 AGFDLQTGPELYYLDYLASLIKVPFAVHGYGALVALSILDRMHRPDMTVNEAVALLRLCI 164
Query: 106 SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPE 142
EVQKRL+IN+ + V +V+KDGI+ LP + + E
Sbjct: 165 QEVQKRLVINLDRYMVRIVTKDGIEELPDLTDFAVKE 201
>gi|289724871|gb|ADD18371.1| 20S proteasome regulatory subunit beta type PSMB2/PRE1 [Glossina
morsitans morsitans]
Length = 195
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 108/157 (68%), Gaps = 16/157 (10%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
AV G+SGDT QF+EFI +N+QLY++RNGYEL+P AAA +TR +AE LRSRSPY N+LI
Sbjct: 39 AVCGESGDTSQFSEFIQQNMQLYEIRNGYELTPSAAANFTRNNMAESLRSRSPYFVNLLI 98
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR---------------- 105
AG D + GP+L+++DYLASLI++P+ HGY +V LSI+ HR
Sbjct: 99 AGFDLQTGPELYYLDYLASLIKVPFAVHGYGALVALSILDRMHRPDMTVNEAVALLRLCI 158
Query: 106 SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPE 142
EVQKRL+IN+ + V +V+KDGI+ LP + + E
Sbjct: 159 QEVQKRLVINLDRYMVRIVTKDGIEELPDLTDFAVKE 195
>gi|387017848|gb|AFJ51042.1| Proteasome subunit beta type-2-like [Crotalus adamanteus]
Length = 201
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 103/145 (71%), Gaps = 16/145 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSRSPY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRSPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D +GP L+++DYLASL ++P+ HGY +TLSI+ Y++
Sbjct: 104 LAGYDEHDGPALYYMDYLASLAKVPFAAHGYGAFLTLSILDRYYKPGITREEAIEVLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGI 129
E+QKR I+N+P+F + KDGI
Sbjct: 164 LEELQKRFILNLPSFNARFIDKDGI 188
>gi|194884398|ref|XP_001976249.1| GG20111 [Drosophila erecta]
gi|195484013|ref|XP_002090526.1| GE13168 [Drosophila yakuba]
gi|190659436|gb|EDV56649.1| GG20111 [Drosophila erecta]
gi|194176627|gb|EDW90238.1| GE13168 [Drosophila yakuba]
Length = 201
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 104/156 (66%), Gaps = 16/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ G+SGDT QF EF++KNI LYKMRNGY+LSP A+A++TRK LAEYLRSR+PY M
Sbjct: 44 ISTVGESGDTEQFTEFVSKNIALYKMRNGYDLSPHASAHFTRKNLAEYLRSRTPYQVFMF 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+DP EGP+L FIDYLA+ + + Y HGY I SI Y
Sbjct: 104 VAGYDPNEGPELTFIDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
+E+QKRL++N+ NF V +V KDG++ L PI A ++
Sbjct: 164 IAEIQKRLVVNLKNFTVAVVDKDGVRDLEPISAASL 199
>gi|195035353|ref|XP_001989142.1| GH11559 [Drosophila grimshawi]
gi|193905142|gb|EDW04009.1| GH11559 [Drosophila grimshawi]
Length = 206
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 104/160 (65%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ G+SGDT QF EFIAKNI LYKMRNGY+LSPR+AA++TRK LAE LRSR+ Y M
Sbjct: 44 ISTVGESGDTEQFTEFIAKNIALYKMRNGYDLSPRSAAHFTRKNLAESLRSRTRYQVFMF 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+DP EGP+L FIDYLAS + Y HGY + SI Y
Sbjct: 104 VAGYDPNEGPELTFIDYLASSKSLNYAGHGYGSMFCASIFDRYWHPNITQEEAYDVLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+QKRLI+N+ NF V +V K+G++HL I AK++ + N
Sbjct: 164 VLEIQKRLIVNLKNFSVAVVDKNGVRHLDQISAKSLVDYN 203
>gi|318103394|ref|NP_001188165.1| proteasome subunit beta type-2 [Ictalurus punctatus]
gi|308322043|gb|ADO28159.1| proteasome subunit beta type-2 [Ictalurus furcatus]
gi|308323629|gb|ADO28950.1| proteasome subunit beta type-2 [Ictalurus punctatus]
Length = 199
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 105/151 (69%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TRK LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D +GP L+++DY+++L + P+ HGY +TLSIM Y+R
Sbjct: 104 LAGYDEADGPALYYMDYMSALAKAPFAAHGYGAFLTLSIMDRYYRPDLTREEALDLLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+ KR I+N+P+F V ++ KDGI + +
Sbjct: 164 IEELNKRFILNLPSFTVRLIDKDGIHDMEKL 194
>gi|327289111|ref|XP_003229268.1| PREDICTED: proteasome subunit beta type-2-like [Anolis
carolinensis]
Length = 201
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 109/157 (69%), Gaps = 19/157 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D +GP L+++DYLASL + P+ HGY +TLSI+ Y++
Sbjct: 104 LAGYDEHDGPTLYYMDYLASLAKAPFAAHGYGAFLTLSILDRYYKPGITREEAIEVLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGI---KHLPPIKAK 138
E+QKR I+N+P+F + KDGI ++P +KA+
Sbjct: 164 LEELQKRFILNLPSFNARFIDKDGIHEVTNIPLLKAE 200
>gi|147903930|ref|NP_001085540.1| proteasome (prosome, macropain) subunit, beta type, 2 [Xenopus
laevis]
gi|49119183|gb|AAH72908.1| MGC80364 protein [Xenopus laevis]
gi|77748113|gb|AAI06263.1| MGC80364 protein [Xenopus laevis]
Length = 199
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 109/156 (69%), Gaps = 16/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + + HGY +TLSI+ Y++
Sbjct: 104 LAGYDEHEGPSLYYMDYLAALAKTRFAAHGYGAYLTLSILDRYYKPDLTREEAVELLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
+E+QKR I+++P+F V ++ KDGI L I A ++
Sbjct: 164 IAELQKRFILSLPSFTVRVIDKDGIHDLESIPASSL 199
>gi|20129563|ref|NP_609804.1| CG17331, isoform A [Drosophila melanogaster]
gi|442628090|ref|NP_001260511.1| CG17331, isoform B [Drosophila melanogaster]
gi|7298330|gb|AAF53558.1| CG17331, isoform A [Drosophila melanogaster]
gi|21064815|gb|AAM29637.1| RH72196p [Drosophila melanogaster]
gi|220949490|gb|ACL87288.1| CG17331-PA [synthetic construct]
gi|220958608|gb|ACL91847.1| CG17331-PA [synthetic construct]
gi|440213861|gb|AGB93046.1| CG17331, isoform B [Drosophila melanogaster]
Length = 201
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 103/156 (66%), Gaps = 16/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ G+SGDT QF EFI+KNI LYKMRNGY+LSPR +A++TRK LAEYLRSR+PY M
Sbjct: 44 ISTVGESGDTEQFTEFISKNIALYKMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMF 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+DP GP+L FIDYLA+ + + Y HGY I SI Y
Sbjct: 104 VAGYDPNAGPELTFIDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
+E+QKRL++N+ NF V +V KDG++ L PI A ++
Sbjct: 164 IAEIQKRLVVNLKNFTVAVVDKDGVRDLEPISAASL 199
>gi|148234532|ref|NP_001084761.1| uncharacterized protein LOC431796 [Xenopus laevis]
gi|47125243|gb|AAH70836.1| MGC84496 protein [Xenopus laevis]
Length = 199
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 108/156 (69%), Gaps = 16/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D GP L+++DYL++L + + HGY +TLSI+ Y++
Sbjct: 104 LAGYDEHAGPSLYYMDYLSALAKTRFAAHGYGAYLTLSILDRYYKPDLTREDAVELLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
SE+QKR I+N+P+F V ++ KDGI L I A ++
Sbjct: 164 ISELQKRFILNLPSFTVRVIDKDGIHDLDSIPASSL 199
>gi|195579636|ref|XP_002079667.1| GD21900 [Drosophila simulans]
gi|194191676|gb|EDX05252.1| GD21900 [Drosophila simulans]
Length = 201
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 104/156 (66%), Gaps = 16/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ G+SGDT QF EF++KNI LYKMRNGY+LSP+A+A++TRK LAEYLRSR+PY M
Sbjct: 44 ISTVGESGDTEQFTEFVSKNIALYKMRNGYDLSPQASAHFTRKNLAEYLRSRTPYQVFMF 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+DP GP+L FIDYLA+ + + Y HGY I SI Y
Sbjct: 104 VAGYDPNAGPELTFIDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQDEAYDVFKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
+E+QKRL++N+ NF V +V KDG++ L PI A ++
Sbjct: 164 IAEIQKRLVVNLKNFTVAVVDKDGVRDLEPISAASL 199
>gi|312373129|gb|EFR20941.1| hypothetical protein AND_18263 [Anopheles darlingi]
Length = 205
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 107/158 (67%), Gaps = 16/158 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA G+ GD VQF E+I+KNI LYKMRNGYEL P+AAA++TR+ LA+YLRSR+PYN N+L
Sbjct: 44 MATMGEPGDRVQFTEYISKNILLYKMRNGYELGPKAAAHFTRRNLADYLRSRTPYNVNIL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G D +GPQL +IDYLA+ + + Y HGY G+ SI YH
Sbjct: 104 LGGCDEVDGPQLHYIDYLANSLPVKYAAHGYGGMFVASIFDRYHHDRITKKEAYEIFRKG 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPE 142
+E+ +RLI+N+PNFKV ++ K+GIK+L I +++ +
Sbjct: 164 VAEIHRRLILNLPNFKVAVIDKEGIKYLDDITPESLKQ 201
>gi|225706970|gb|ACO09331.1| Proteasome subunit beta type 2 [Osmerus mordax]
Length = 199
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 105/151 (69%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TRK LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPSAAANFTRKNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D +GP LF++D+L++L + P+ HGY +TLSI+ Y+R
Sbjct: 104 LAGYDESDGPGLFYMDHLSALAKAPFAAHGYGAFLTLSILDRYYRPELTRDEAVDLLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+ KR I+N+P+F V ++ K+GI L I
Sbjct: 164 VEELNKRFILNLPSFSVRLIDKEGIHDLEKI 194
>gi|195344560|ref|XP_002038849.1| GM17161 [Drosophila sechellia]
gi|194133979|gb|EDW55495.1| GM17161 [Drosophila sechellia]
Length = 201
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 103/156 (66%), Gaps = 16/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ G+SGDT QF EF++KNI LYKMRNGY+LSP A+A++TRK LAEYLRSR+PY M
Sbjct: 44 ISTVGESGDTEQFTEFVSKNIALYKMRNGYDLSPHASAHFTRKNLAEYLRSRTPYQVFMF 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+DP GP+L FIDYLA+ + + Y HGY I SI Y
Sbjct: 104 VAGYDPNAGPELTFIDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQDEAYDVFKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
+E+QKRL++N+ NF V +V KDG++ L PI A ++
Sbjct: 164 IAEIQKRLVVNLKNFTVAVVDKDGVRDLEPISAASL 199
>gi|50540284|ref|NP_001002609.1| proteasome subunit beta type-2 [Danio rerio]
gi|49900459|gb|AAH75983.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Danio rerio]
Length = 199
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 105/151 (69%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TRK LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D +GP L+++DYL++L + P+ HGY +TLSI+ Y+R
Sbjct: 104 LAGYDETDGPGLYYMDYLSALAKAPFAAHGYGAFLTLSILDRYYRPDLTREEAVDLLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+ KR I+N+P+F V ++ KDGI + +
Sbjct: 164 LEELNKRFILNLPSFTVRLIDKDGIHDMEKL 194
>gi|118791132|ref|XP_319581.3| AGAP008837-PA [Anopheles gambiae str. PEST]
gi|116117453|gb|EAA14834.3| AGAP008837-PA [Anopheles gambiae str. PEST]
Length = 207
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 108/158 (68%), Gaps = 16/158 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G++GD VQF E+I+KNI LY+MRNGYEL P+AAA++TR+ LA+YLRSR+PY+ N+L
Sbjct: 46 LATMGEAGDRVQFTEYISKNILLYRMRNGYELGPKAAAHFTRRNLADYLRSRTPYHVNLL 105
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G+D +GPQL +IDYLA+ + + + HGY G+ SI YH
Sbjct: 106 VGGYDEVDGPQLHYIDYLANSLPVKHGAHGYGGMFVNSIFDRYHHDKITQKEAYEIFRKG 165
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPE 142
+E+ KRLI+N+PNFKV ++ KDG+K+L I ++ +
Sbjct: 166 VTEIHKRLILNLPNFKVAVIDKDGVKYLDDITPDSLKQ 203
>gi|58332308|ref|NP_001011057.1| proteasome (prosome, macropain) subunit, beta type, 2 [Xenopus
(Silurana) tropicalis]
gi|54038181|gb|AAH84185.1| hypothetical LOC496467 [Xenopus (Silurana) tropicalis]
gi|89266833|emb|CAJ83920.1| proteasome (prosome macropain) subunit beta type 2 [Xenopus
(Silurana) tropicalis]
Length = 199
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 108/156 (69%), Gaps = 16/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D +GP L+++DYLA+L + + HGY +TLSI+ Y++
Sbjct: 104 LAGYDEHDGPSLYYMDYLAALAKTRFAAHGYGAYLTLSILDRYYKPDLTREDAVELLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
+E+QKR I+++P+F V ++ KDGI L I A +
Sbjct: 164 IAELQKRFILSLPSFTVRVIDKDGIHDLETIPASGL 199
>gi|410911568|ref|XP_003969262.1| PREDICTED: proteasome subunit beta type-2-like [Takifugu rubripes]
Length = 199
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 106/151 (70%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TRK L+EYLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPSAAANFTRKNLSEYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D +GP L+++DYLASL + P+ HGY +TLSI+ +++
Sbjct: 104 LAGYDDADGPGLYYMDYLASLAKAPFAAHGYGAYLTLSILDRHYKPDLTREEAVALLKMC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+ KR I+N+P+F V ++ K+GI+ L I
Sbjct: 164 VEELSKRFILNLPSFSVRLIDKEGIQDLEKI 194
>gi|195386586|ref|XP_002051985.1| GJ17300 [Drosophila virilis]
gi|194148442|gb|EDW64140.1| GJ17300 [Drosophila virilis]
Length = 206
Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 103/160 (64%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ G+SGDT QF EFIAKNI LYKMRNGY+LSP +AA++TRK LAE LRSR+ Y M
Sbjct: 44 ISTVGESGDTEQFTEFIAKNIALYKMRNGYDLSPHSAAHFTRKNLAESLRSRTRYQVFMF 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
IAG+DP EGP+L FIDYLAS + Y HGY + SI Y
Sbjct: 104 IAGYDPAEGPELTFIDYLASAQSVNYAGHGYGSMFCSSIFDRYWHPNITQEEAYDVLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+QKRLI+N+ NF V +V K+G++HL I +K++ + N
Sbjct: 164 VLEIQKRLIVNLKNFNVAVVDKNGVRHLDQISSKSLIDYN 203
>gi|348519415|ref|XP_003447226.1| PREDICTED: proteasome subunit beta type-2-like [Oreochromis
niloticus]
Length = 199
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 106/151 (70%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TRK LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D +GP L+++D+L+SL + P+ HGY +TLSI+ Y+R
Sbjct: 104 LAGYDDTDGPGLYYMDHLSSLAKAPFAAHGYGAYLTLSILDRYYRPDLSRDEAVDLLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E++KR I+N+P+F V ++ K+GI L +
Sbjct: 164 VEELKKRFILNLPSFTVRLIDKEGIHDLEKL 194
>gi|198474058|ref|XP_001356543.2| GA14463 [Drosophila pseudoobscura pseudoobscura]
gi|198138230|gb|EAL33607.2| GA14463 [Drosophila pseudoobscura pseudoobscura]
Length = 206
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 107/160 (66%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ TG+SGDT QF EFI+KNI LYKMRNGY+LSPRAAA++TRK LA+YLRSR+PY M
Sbjct: 44 ISTTGESGDTEQFTEFISKNIALYKMRNGYDLSPRAAAHFTRKNLADYLRSRTPYQVFMF 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D +G +L FIDYLA+ + + HGY + SI Y
Sbjct: 104 VAGYDETDGAELAFIDYLANAKSLNHAGHGYGAMFCSSIYDRYWHPNITQDEAYDIFKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+QKRL++N+ NF V++V K+G+++L PI A+++ + N
Sbjct: 164 IVEIQKRLVVNLKNFNVSVVDKNGVRNLEPISAQSLTDYN 203
>gi|223646934|gb|ACN10225.1| Proteasome subunit beta type-2 [Salmo salar]
gi|223672797|gb|ACN12580.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 208
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 109/159 (68%), Gaps = 19/159 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KNIQLYKMRNGYELSP+AAA +TRK LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPKAAANFTRKNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG D +GP L+++D+L++L + P+ HGY +TLSI+ Y+R
Sbjct: 104 LAGFDETDGPGLYYMDHLSALAKAPFAAHGYGAYLTLSILDRYYRPDLTRDEAVGLLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGI---KHLPPIKAKNI 140
E+ KR I+N+P+F V ++ +GI + L P+ AK I
Sbjct: 164 VEELNKRFILNLPSFSVRLIDTEGIHDLEKLMPVGAKFI 202
>gi|209737686|gb|ACI69712.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 208
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 108/157 (68%), Gaps = 19/157 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KNIQLYKMRNGYELSP+AAA +TRK LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPKAAANFTRKNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG D +GP L+++D+L++L + P+ HGY +TLSI+ Y+R
Sbjct: 104 LAGFDETDGPGLYYMDHLSALAKAPFAAHGYGAYLTLSILDRYYRPDLTRDEAVGLLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGI---KHLPPIKAK 138
E+ KR I+N+P+F V ++ +GI + L P+ AK
Sbjct: 164 VEELNKRFILNLPSFSVRLIDTEGIHDLEKLMPVGAK 200
>gi|432883021|ref|XP_004074194.1| PREDICTED: proteasome subunit beta type-2-like [Oryzias latipes]
Length = 199
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TRK LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPSAAANFTRKNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D +GP LF++DYL+SL + P+ HGY +TLSI+ ++
Sbjct: 104 LAGYDDADGPGLFYMDYLSSLAKAPFAAHGYGAFLTLSILDRDYKPDLTREEAMNILRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+ KR I+N+ +F V ++ KDGI + +
Sbjct: 164 VEELNKRFILNLHSFNVRLIDKDGIHDMEKL 194
>gi|395526506|ref|XP_003765403.1| PREDICTED: proteasome subunit beta type-2 [Sarcophilus harrisii]
Length = 176
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 106/151 (70%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 19 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 78
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y++
Sbjct: 79 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYKPSITREEAVELLKKC 138
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P+F V ++ KDGI L I
Sbjct: 139 LEELQKRFILNLPSFSVRIIDKDGIHELDTI 169
>gi|225713254|gb|ACO12473.1| Proteasome subunit beta type-2 [Lepeophtheirus salmonis]
gi|290561176|gb|ADD37990.1| Proteasome subunit beta type-2 [Lepeophtheirus salmonis]
Length = 210
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 105/152 (69%), Gaps = 17/152 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ G+SGDT QFAEF+AKNIQLYKMRN YE+SP AA +TR+ LA+YLRSR+P++ N+L
Sbjct: 44 MSALGESGDTTQFAEFMAKNIQLYKMRNAYEMSPSEAANFTRRNLADYLRSRTPFHVNLL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
IAG+D + +L+ +DYLA +++ + +HGY GI + I+ +R
Sbjct: 104 IAGYDKKSNKTELYTVDYLAGMVQTEHASHGYGGIFSSGILDRNYRPDMTVEEGYDLITT 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
+EVQKRLIIN+PNF V +++K+G K L PI
Sbjct: 164 CVAEVQKRLIINLPNFSVQIINKEGTKSLKPI 195
>gi|358333678|dbj|GAA52161.1| 20S proteasome subunit beta 4 [Clonorchis sinensis]
Length = 201
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 101/150 (67%), Gaps = 16/150 (10%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
A G++GDT QFAEFI +N+QLY++RNGYELSP AA +TR LA LRSR PY NM+I
Sbjct: 45 AACGEAGDTTQFAEFIQQNMQLYEIRNGYELSPYGAANFTRSNLANALRSRKPYQVNMII 104
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR---------------- 105
AG D ++GP+LF++DYLA+L ++P++ HGY +TLS++ +R
Sbjct: 105 AGFDTQKGPELFYMDYLATLAKVPFVVHGYGSYLTLSVLDRDYRPDMTVDQAVDLLRSCA 164
Query: 106 SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+ + V +V+KDGI LP +
Sbjct: 165 KEIQKRFIVNLDRYCVRLVTKDGISALPDL 194
>gi|225705784|gb|ACO08738.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
Length = 200
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 107/157 (68%), Gaps = 19/157 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KNIQLYKMRNGYELSP AAA +TRK LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG D +GP L+++D+L++L + P+ HG+ +TLSI+ Y+R
Sbjct: 104 LAGFDETDGPGLYYMDHLSALAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAMDLLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDG---IKHLPPIKAK 138
E+ R I+N+P+F V ++ KDG ++ L P+ AK
Sbjct: 164 IEELNHRFILNLPSFSVRLIDKDGTHDLEKLIPVGAK 200
>gi|61612103|gb|AAX47291.1| proteasome beta 2 subunit [Clonorchis sinensis]
Length = 201
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 101/150 (67%), Gaps = 16/150 (10%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
A G++GDT QFAEFI +N+QLY++RNGYELSP AA +TR LA LRSR PY NM+I
Sbjct: 45 AACGEAGDTTQFAEFIQQNMQLYEIRNGYELSPYGAANFTRSNLANALRSRKPYQVNMII 104
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR---------------- 105
AG D ++GP+LF++DYLA+L ++P++ HGY +TLS++ +R
Sbjct: 105 AGFDTQKGPELFYMDYLATLAKVPFVVHGYGSYLTLSVLDRDYRPDMTVDQAVDLLRSCA 164
Query: 106 SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+ + V +V+KDGI LP +
Sbjct: 165 KEIQKRFIVNLDRYCVRLVTKDGISALPDL 194
>gi|259089098|ref|NP_001158587.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
gi|225705056|gb|ACO08374.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
Length = 200
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 107/157 (68%), Gaps = 19/157 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KNIQLYKMRNGYELSP AAA +TRK LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG D +GP L+++D+L++L + P+ HG+ +TLSI+ Y+R
Sbjct: 104 LAGFDETDGPGLYYMDHLSALAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAMDLLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDG---IKHLPPIKAK 138
E+ R I+N+P+F V ++ KDG ++ L P+ AK
Sbjct: 164 IEELNHRFILNLPSFSVRLIDKDGTHDLEKLIPVGAK 200
>gi|223646410|gb|ACN09963.1| Proteasome subunit beta type-2 [Salmo salar]
gi|223672257|gb|ACN12310.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 200
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KNIQLYKMRNGYELSP AAA +TRK LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG D +GP L+++D+L++L + P+ HG+ +TLSI+ Y+R
Sbjct: 104 LAGFDETDGPGLYYMDHLSALAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAVDLLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+ R I+N+P+F V ++ KDGI L +
Sbjct: 164 VEELNYRFILNLPSFSVRLIDKDGIHDLEKL 194
>gi|225713306|gb|ACO12499.1| Proteasome subunit beta type-2 [Lepeophtheirus salmonis]
gi|290562017|gb|ADD38406.1| Proteasome subunit beta type-2 [Lepeophtheirus salmonis]
Length = 206
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 106/152 (69%), Gaps = 17/152 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ G+SGDT QFAEF+AKNIQLYKMRN YE+SP AA +TR+ LA+YLRSR+P++ N+L
Sbjct: 44 MSALGESGDTTQFAEFMAKNIQLYKMRNAYEMSPSEAANFTRRNLADYLRSRTPFHVNLL 103
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
IAG+D + + +L+ +DYLA +++ + +HGY GI + I+ +R
Sbjct: 104 IAGYDKKSDKAELYTMDYLAGMVKTEHASHGYGGIFSSGILDRNYRPDMTVEEGYDLIKT 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
+EVQKRLIIN+PNF V +++K+G K L PI
Sbjct: 164 CVAEVQKRLIINLPNFSVQIINKEGTKSLKPI 195
>gi|224082072|ref|XP_002198635.1| PREDICTED: proteasome subunit beta type-2 [Taeniopygia guttata]
Length = 201
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 102/151 (67%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G+ GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEPGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y++
Sbjct: 104 LAGYDDHEGPALYYMDYLAALAKTPFAAHGYGAFLTLSILDRYYKPGITREEAVDLLKQC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E++KR I+N+ +F + K+GI + I
Sbjct: 164 LEELKKRFILNLTSFNARFIDKEGIHEVDNI 194
>gi|257215971|emb|CAX83135.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
Length = 184
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/140 (52%), Positives = 98/140 (70%), Gaps = 16/140 (11%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
AV G+SGDT QF+EFI +N+QLY++RNGYEL+P AAA +TR +AE LRSRSPY N+LI
Sbjct: 45 AVCGESGDTSQFSEFIQQNMQLYEIRNGYELTPNAAANFTRNNMAESLRSRSPYFVNLLI 104
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR---------------- 105
AG D GP+L+F+DYLASLI++P+ HGY +V+LSI+ HR
Sbjct: 105 AGFDSHTGPELYFLDYLASLIKVPFAVHGYGALVSLSILDRMHRPDMTVDEAVALLRLCI 164
Query: 106 SEVQKRLIINVPNFKVTMVS 125
EVQKRL+IN+ + V +V+
Sbjct: 165 QEVQKRLVINLDRYMVRIVT 184
>gi|209730324|gb|ACI66031.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 200
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KNIQLYKMRNGYELSP AAA +TRK LA+YLRSR+PY+ N+L
Sbjct: 44 LPCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG D +GP L+++D+L++L + P+ HG+ +TLSI+ Y+R
Sbjct: 104 LAGFDETDGPGLYYMDHLSALAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAVDLLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+ R I+N+P+F V ++ KDGI L +
Sbjct: 164 VEELNYRFILNLPSFSVRLIDKDGIHDLEKL 194
>gi|196008819|ref|XP_002114275.1| hypothetical protein TRIADDRAFT_50465 [Trichoplax adhaerens]
gi|190583294|gb|EDV23365.1| hypothetical protein TRIADDRAFT_50465 [Trichoplax adhaerens]
Length = 199
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 99/145 (68%), Gaps = 16/145 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +GD GD+VQFAEF+AKN++LY+++NGY ++P AAA YTR QLA+ LRS +PY NML
Sbjct: 44 MACSGDPGDSVQFAEFVAKNVELYRIKNGYSMTPNAAANYTRHQLAQSLRSSTPYTVNML 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
I G+D +GP L+++DYLASL ++P+ HGY T SI+ Y++
Sbjct: 104 IGGYDEYDGPSLYYLDYLASLQKLPFGAHGYGSYFTFSILDRYYKKGMSKAEALKVLSLC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGI 129
EV+KR IIN+P+F + + KDGI
Sbjct: 164 LDEVKKRFIINLPSFNIKFIDKDGI 188
>gi|225704100|gb|ACO07896.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
Length = 200
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 106/157 (67%), Gaps = 19/157 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KNIQLYKMRNGYELSP AAA +TRK LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG D +GP L+++D+L++L + P+ HG+ +TLSI+ Y+R
Sbjct: 104 LAGFDETDGPGLYYMDHLSALAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAMDLLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGI---KHLPPIKAK 138
E+ R I+N+P+F V ++ KDG + L P+ AK
Sbjct: 164 IEELNHRFILNLPSFSVRLIDKDGTHDPEKLIPVGAK 200
>gi|195114510|ref|XP_002001810.1| GI17050 [Drosophila mojavensis]
gi|193912385|gb|EDW11252.1| GI17050 [Drosophila mojavensis]
Length = 206
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 101/160 (63%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ G SGDT QF EFIAKNI LYKMRNGY+LSP++AA++TRK LAE LRSR+PY M
Sbjct: 44 ISTVGASGDTEQFTEFIAKNIVLYKMRNGYDLSPKSAAHFTRKNLAESLRSRTPYQVFMF 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
IAG+D EGP+L FID LAS + Y HGY + SI Y
Sbjct: 104 IAGYDTTEGPELTFIDNLASAQSLNYAGHGYGSMFCASIFDRYWHPKITQEEAYDVLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+QKRLI+N+ NF V++V K G++ L I +K++ + N
Sbjct: 164 VLEIQKRLIVNLKNFNVSVVDKSGVRQLEQISSKSLLDYN 203
>gi|226372926|gb|ACO52088.1| Proteasome subunit beta type-2 [Rana catesbeiana]
Length = 199
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 111/156 (71%), Gaps = 16/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TRK LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPSAAANFTRKNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D +GP L+++D+LA+L + P+ HGY ++TLSI+ Y++
Sbjct: 104 LAGYDDHDGPSLYYMDHLAALAKAPFAAHGYGALLTLSILDRYYKPDLTREEAVELLKRC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
+E+QKR I+++P+F V ++ KDGI +L I ++
Sbjct: 164 ITELQKRFILSLPSFTVRVIDKDGIHNLDNIPGSSV 199
>gi|345324600|ref|XP_001508741.2| PREDICTED: proteasome subunit beta type-2-like [Ornithorhynchus
anatinus]
Length = 201
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 107/151 (70%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y++
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYKPSITREEAIELLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
+E++KR I+N+P+F V ++ KDGI + I
Sbjct: 164 LAELKKRFILNLPSFTVRIIDKDGIHDMETI 194
>gi|344287599|ref|XP_003415540.1| PREDICTED: proteasome subunit beta type-2-like isoform 2 [Loxodonta
africana]
Length = 176
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 104/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 19 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 78
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 79 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 138
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 139 LEELQKRFILNLPTFSVRIIDKNGIHELENI 169
>gi|344287597|ref|XP_003415539.1| PREDICTED: proteasome subunit beta type-2-like isoform 1 [Loxodonta
africana]
Length = 201
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 104/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 164 LEELQKRFILNLPTFSVRIIDKNGIHELENI 194
>gi|8394079|ref|NP_058980.1| proteasome subunit beta type-2 [Rattus norvegicus]
gi|730377|sp|P40307.1|PSB2_RAT RecName: Full=Proteasome subunit beta type-2; AltName:
Full=Macropain subunit C7-I; AltName:
Full=Multicatalytic endopeptidase complex subunit C7-I;
AltName: Full=Proteasome component C7-I
gi|436781|dbj|BAA04823.1| proteasome subunit RC7-I [Rattus sp.]
gi|34849630|gb|AAH58487.1| Proteasome (prosome, macropain) subunit, beta type 2 [Rattus
norvegicus]
gi|149023966|gb|EDL80463.1| proteasome (prosome, macropain) subunit, beta type 2 [Rattus
norvegicus]
gi|737261|prf||1922244A proteasome:SUBUNIT=RC7-I
Length = 201
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 104/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ KDGI +L I
Sbjct: 164 LEELQKRFILNLPTFSVRVIDKDGIHNLENI 194
>gi|391343044|ref|XP_003745825.1| PREDICTED: proteasome subunit beta type-2-like [Metaseiulus
occidentalis]
Length = 199
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 104/153 (67%), Gaps = 17/153 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MAV G+SGDTVQFA++IAKNIQL+KMRNGY LSP+AAA +TRK LA+ LR+R+ Y C++L
Sbjct: 44 MAVAGESGDTVQFADYIAKNIQLFKMRNGYGLSPKAAANFTRKNLADSLRTRNAYRCDLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------- 106
+ G D + P+L+++DYL SL ++P+ HGY GI ++ ++ +R+
Sbjct: 104 LGGFDSHSKEPELYWVDYLGSLAKVPFAAHGYGGIFSMGVIDAAYRADMTVEEAHSLIRA 163
Query: 107 ---EVQKRLIINVPNFKVTMVSKDGIKHLPPIK 136
E++KR + N+P FK ++ +GI+ L +K
Sbjct: 164 CVKEIRKRFLGNMPVFKCVVIDTNGIRDLSDVK 196
>gi|227116345|ref|NP_036100.3| proteasome subunit beta type-2 [Mus musculus]
gi|9910832|sp|Q9R1P3.1|PSB2_MOUSE RecName: Full=Proteasome subunit beta type-2; AltName:
Full=Macropain subunit C7-I; AltName:
Full=Multicatalytic endopeptidase complex subunit C7-I;
AltName: Full=Proteasome component C7-I
gi|378792312|pdb|3UNB|J Chain J, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792326|pdb|3UNB|X Chain X, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792340|pdb|3UNB|LL Chain l, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792354|pdb|3UNB|ZZ Chain z, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792368|pdb|3UNE|J Chain J, Mouse Constitutive 20s Proteasome
gi|378792382|pdb|3UNE|X Chain X, Mouse Constitutive 20s Proteasome
gi|378792396|pdb|3UNE|LL Chain l, Mouse Constitutive 20s Proteasome
gi|378792410|pdb|3UNE|ZZ Chain z, Mouse Constitutive 20s Proteasome
gi|378792424|pdb|3UNF|J Chain J, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792438|pdb|3UNF|X Chain X, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792452|pdb|3UNH|J Chain J, Mouse 20s Immunoproteasome
gi|378792466|pdb|3UNH|X Chain X, Mouse 20s Immunoproteasome
gi|5757657|gb|AAD50535.1|AF060090_1 proteasome subunit C7-I [Mus musculus]
gi|14198410|gb|AAH08265.1| Proteasome (prosome, macropain) subunit, beta type 2 [Mus musculus]
gi|148698332|gb|EDL30279.1| proteasome (prosome, macropain) subunit, beta type 2 [Mus musculus]
Length = 201
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 104/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ KDGI +L I
Sbjct: 164 LEELQKRFILNLPTFSVRVIDKDGIHNLENI 194
>gi|62751339|ref|NP_001015615.1| proteasome subunit beta type-2 [Bos taurus]
gi|426215154|ref|XP_004001839.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Ovis aries]
gi|75060936|sp|Q5E9K0.1|PSB2_BOVIN RecName: Full=Proteasome subunit beta type-2
gi|59858075|gb|AAX08872.1| proteasome beta 2 subunit [Bos taurus]
gi|59858205|gb|AAX08937.1| proteasome beta 2 subunit [Bos taurus]
gi|74354591|gb|AAI02368.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Bos taurus]
gi|296488894|tpg|DAA31007.1| TPA: proteasome subunit beta type-2 [Bos taurus]
gi|440908579|gb|ELR58582.1| Proteasome subunit beta type-2 [Bos grunniens mutus]
Length = 201
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 104/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISREKAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ ++GI L I
Sbjct: 164 LEELQKRFILNLPTFSVRIIDRNGIHDLDNI 194
>gi|291408818|ref|XP_002720739.1| PREDICTED: proteasome beta 2 subunit [Oryctolagus cuniculus]
Length = 201
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRDRAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ KDGI L I
Sbjct: 164 LEELQKRFILNLPTFSVRIIDKDGIHDLDNI 194
>gi|426215156|ref|XP_004001840.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Ovis aries]
Length = 176
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 104/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 19 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 78
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 79 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISREKAVELLRKC 138
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ ++GI L I
Sbjct: 139 LEELQKRFILNLPTFSVRIIDRNGIHDLDNI 169
>gi|26347309|dbj|BAC37303.1| unnamed protein product [Mus musculus]
Length = 201
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 104/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ KDGI +L I
Sbjct: 164 LEELQKRFILNLPTFSVRVIDKDGIPNLENI 194
>gi|354477453|ref|XP_003500934.1| PREDICTED: proteasome subunit beta type-2-like [Cricetulus griseus]
gi|344244984|gb|EGW01088.1| Proteasome subunit beta type-2 [Cricetulus griseus]
Length = 201
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 104/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERALELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI +L I
Sbjct: 164 LDELQKRFILNLPTFSVRVIDKNGIHNLENI 194
>gi|118101652|ref|XP_417777.2| PREDICTED: proteasome subunit beta type-2 isoform 2 [Gallus gallus]
Length = 201
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y++
Sbjct: 104 LAGYDDHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYKPGITREEAVELLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR ++N+ +F + KDGI + +
Sbjct: 164 LEELQKRFVLNLTSFNARFIDKDGIHEVDSV 194
>gi|225717446|gb|ACO14569.1| Proteasome subunit beta type-2 [Caligus clemensi]
Length = 204
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 105/160 (65%), Gaps = 17/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ G SGDT +FAEF+ KNIQLYK+RN YE+SP AA + R+ LA+ LRSR+P++ N+L
Sbjct: 44 MSAIGQSGDTTEFAEFMTKNIQLYKLRNAYEMSPSEAANFIRRNLADSLRSRNPFHVNLL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
IAG+D + +L+ +DYLA +++ + +HGY GI + I+ ++R
Sbjct: 104 IAGYDKKSSKAELYSMDYLAGMVKTEHASHGYGGIFSSGILDRHYRPDMTVEEGYNLIKT 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEE 143
+EVQKRLIIN+PNF + + SKDGIK L PI + + E
Sbjct: 164 CIAEVQKRLIINLPNFGIQIASKDGIKSLKPIMLERVSFE 203
>gi|363742288|ref|XP_003642616.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Gallus gallus]
Length = 176
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 19 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 78
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y++
Sbjct: 79 LAGYDDHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYKPGITREEAVELLKKC 138
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR ++N+ +F + KDGI + +
Sbjct: 139 LEELQKRFVLNLTSFNARFIDKDGIHEVDSV 169
>gi|417408837|gb|JAA50954.1| Putative proteasome subunit beta type-2 isoform 1, partial
[Desmodus rotundus]
Length = 229
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 72 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 131
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y++
Sbjct: 132 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYKPTISREMAVELLRKC 191
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K GI L I
Sbjct: 192 LEELQKRFILNLPTFSVRIIDKHGIHDLDNI 222
>gi|225709330|gb|ACO10511.1| Proteasome subunit beta type-2 [Caligus rogercresseyi]
Length = 204
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 103/152 (67%), Gaps = 17/152 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ G SGDT +FAEF+ KNIQLYK+RN YE+SP AA + R+ LA+ LRSR+P++ N+L
Sbjct: 44 MSAIGQSGDTTEFAEFMTKNIQLYKLRNAYEMSPSEAANFIRRNLADSLRSRNPFHVNLL 103
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+AG D + E +L+ +DYLA +++ + THGY G+ + I+ +++
Sbjct: 104 VAGFDKKSEQAELYSMDYLAGMVKTAHATHGYGGVFSSGILDRHYKPDMTVEEGYNLLKN 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
+E+QKRLIIN+PNF V +V+KDGIK L PI
Sbjct: 164 CIAEIQKRLIINLPNFGVQIVTKDGIKSLKPI 195
>gi|326933067|ref|XP_003212631.1| PREDICTED: proteasome subunit beta type-2-like [Meleagris
gallopavo]
Length = 240
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 107/156 (68%), Gaps = 19/156 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 83 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 142
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y++
Sbjct: 143 LAGYDDHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYKPGITREEAVELLKKC 202
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGI---KHLPPIKA 137
E+QKR ++N+ +F + KDGI ++P +KA
Sbjct: 203 LEELQKRFVLNLTSFNARFIDKDGIHEVDNVPLLKA 238
>gi|449273111|gb|EMC82719.1| Proteasome subunit beta type-2 [Columba livia]
Length = 183
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 106/157 (67%), Gaps = 21/157 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+YLRSR+PY+ N+L
Sbjct: 26 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLL 85
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D +GP L+++DYLA+L + P+ HGY +TLSI+ Y++
Sbjct: 86 LAGYDEHDGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYKPSITREEAMELLKKC 145
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIP 141
E+QKR I+N+ +F + KDGI + +NIP
Sbjct: 146 LEELQKRFILNLASFNARFIDKDGIH-----EVENIP 177
>gi|348571341|ref|XP_003471454.1| PREDICTED: proteasome subunit beta type-2-like isoform 1 [Cavia
porcellus]
Length = 201
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRDKAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 164 LEELQKRFILNLPTFSVRIIDKNGIHDLDNI 194
>gi|225709636|gb|ACO10664.1| Proteasome subunit beta type-2 [Caligus rogercresseyi]
gi|225710786|gb|ACO11239.1| Proteasome subunit beta type-2 [Caligus rogercresseyi]
Length = 204
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 103/152 (67%), Gaps = 17/152 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ G SGDT +FAEF+ KNIQLYK+RN YE+SP AA + R+ LA+ LRSR+P++ N+L
Sbjct: 44 MSAIGQSGDTTEFAEFMTKNIQLYKLRNAYEMSPSEAANFIRRNLADSLRSRNPFHVNLL 103
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+AG D + E +L+ +DYLA +++ + THGY G+ + I+ +++
Sbjct: 104 VAGFDKKSEQAELYSMDYLAGMVKTEHATHGYGGVFSSGILDRHYKPDMTVEEGYNLLKN 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
+E+QKRLIIN+PNF V +V+KDGIK L PI
Sbjct: 164 CIAEIQKRLIINLPNFGVQIVTKDGIKSLKPI 195
>gi|4506195|ref|NP_002785.1| proteasome subunit beta type-2 isoform 1 [Homo sapiens]
gi|350534414|ref|NP_001233318.1| proteasome subunit beta type-2 [Pan troglodytes]
gi|383872756|ref|NP_001244354.1| proteasome subunit beta type-2 [Macaca mulatta]
gi|296207459|ref|XP_002750652.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Callithrix
jacchus]
gi|332248600|ref|XP_003273452.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Nomascus
leucogenys]
gi|397482832|ref|XP_003812620.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Pan paniscus]
gi|402853901|ref|XP_003891626.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Papio anubis]
gi|426328911|ref|XP_004025490.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Gorilla
gorilla gorilla]
gi|441633910|ref|XP_004089796.1| PREDICTED: proteasome subunit beta type-2 [Nomascus leucogenys]
gi|1709762|sp|P49721.1|PSB2_HUMAN RecName: Full=Proteasome subunit beta type-2; AltName:
Full=Macropain subunit C7-I; AltName:
Full=Multicatalytic endopeptidase complex subunit C7-I;
AltName: Full=Proteasome component C7-I
gi|21465652|pdb|1IRU|K Chain K, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465666|pdb|1IRU|Y Chain Y, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|565649|dbj|BAA05646.1| proteasome subunit HsC7-I [Homo sapiens]
gi|30583113|gb|AAP35801.1| proteasome (prosome, macropain) subunit, beta type, 2 [Homo
sapiens]
gi|48145841|emb|CAG33143.1| PSMB2 [Homo sapiens]
gi|60655289|gb|AAX32208.1| proteasome subunit beta type 2 [synthetic construct]
gi|75517958|gb|AAI01837.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Homo
sapiens]
gi|79160069|gb|AAI07902.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Homo
sapiens]
gi|85397257|gb|AAI05127.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Homo
sapiens]
gi|119627811|gb|EAX07406.1| proteasome (prosome, macropain) subunit, beta type, 2, isoform
CRA_a [Homo sapiens]
gi|119627812|gb|EAX07407.1| proteasome (prosome, macropain) subunit, beta type, 2, isoform
CRA_a [Homo sapiens]
gi|123993727|gb|ABM84465.1| proteasome (prosome, macropain) subunit, beta type, 2 [synthetic
construct]
gi|208967172|dbj|BAG73600.1| proteasome (prosome, macropain) subunit, beta type, 2 [synthetic
construct]
gi|343958764|dbj|BAK63237.1| proteasome subunit beta type 2 [Pan troglodytes]
gi|355557813|gb|EHH14593.1| hypothetical protein EGK_00547 [Macaca mulatta]
gi|355745130|gb|EHH49755.1| hypothetical protein EGM_00466 [Macaca fascicularis]
gi|380785705|gb|AFE64728.1| proteasome subunit beta type-2 isoform 1 [Macaca mulatta]
gi|383412983|gb|AFH29705.1| proteasome subunit beta type-2 isoform 1 [Macaca mulatta]
gi|384944538|gb|AFI35874.1| proteasome subunit beta type-2 isoform 1 [Macaca mulatta]
gi|410215842|gb|JAA05140.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|410256472|gb|JAA16203.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|410303162|gb|JAA30181.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|410303164|gb|JAA30182.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|410303168|gb|JAA30184.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|410303170|gb|JAA30185.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|410303172|gb|JAA30186.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|410340615|gb|JAA39254.1| proteasome (prosome, macropain) subunit, beta type, 2 [Pan
troglodytes]
gi|1091574|prf||2021261B proteasome:SUBUNIT=HsC7-I
Length = 201
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 164 LEELQKRFILNLPTFSVRIIDKNGIHDLDNI 194
>gi|198426046|ref|XP_002119550.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
type, 2 [Ciona intestinalis]
Length = 200
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 101/155 (65%), Gaps = 17/155 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+VTGDSGD+ QF+E+I KN+QLYKMRNGYE+S + A +TRK LAE LR ++PYN N+L
Sbjct: 44 MSVTGDSGDSNQFSEYIQKNLQLYKMRNGYEMSTKGMANFTRKTLAEALR-KNPYNVNLL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG D L+F+DYLAS +E+P+ HGY LS++ +H+
Sbjct: 103 MAGCDDSSDCSLYFMDYLASSVEVPFAAHGYGSYFVLSLLDRWHKPDLTRDEAVILLRKC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKN 139
E++KR I+N+P + +V KDGI LP +K ++
Sbjct: 163 MEELKKRFIVNLPAVLIRIVDKDGIHTLPLLKEQD 197
>gi|345780637|ref|XP_532564.3| PREDICTED: proteasome subunit beta type-2 isoform 3 [Canis lupus
familiaris]
gi|410966766|ref|XP_003989900.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Felis catus]
Length = 201
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 164 LEELQKRFILNLPTFSVRIIDKNGIHDLDNI 194
>gi|30585195|gb|AAP36870.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type, 2
[synthetic construct]
gi|61372329|gb|AAX43824.1| proteasome subunit beta type 2 [synthetic construct]
Length = 202
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 164 LEELQKRFILNLPTFSVRIIDKNGIHDLDNI 194
>gi|351714187|gb|EHB17106.1| Proteasome subunit beta type-2 [Heterocephalus glaber]
Length = 201
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 164 LEELQKRFILNLPTFSVRIIDKNGIHDLDNI 194
>gi|348571343|ref|XP_003471455.1| PREDICTED: proteasome subunit beta type-2-like isoform 2 [Cavia
porcellus]
Length = 176
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 19 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 78
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 79 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRDKAVELLRKC 138
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 139 LEELQKRFILNLPTFSVRIIDKNGIHDLDNI 169
>gi|315139006|ref|NP_001186708.1| proteasome subunit beta type-2 isoform 2 [Homo sapiens]
gi|332248602|ref|XP_003273453.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Nomascus
leucogenys]
gi|345780641|ref|XP_003432019.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Canis lupus
familiaris]
gi|397482834|ref|XP_003812621.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Pan paniscus]
gi|402853903|ref|XP_003891627.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Papio anubis]
gi|410966768|ref|XP_003989901.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Felis catus]
gi|426328913|ref|XP_004025491.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Gorilla
gorilla gorilla]
gi|119627813|gb|EAX07408.1| proteasome (prosome, macropain) subunit, beta type, 2, isoform
CRA_b [Homo sapiens]
gi|221041574|dbj|BAH12464.1| unnamed protein product [Homo sapiens]
Length = 176
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 19 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 78
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 79 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 138
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 139 LEELQKRFILNLPTFSVRIIDKNGIHDLDNI 169
>gi|297665553|ref|XP_002811111.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Pongo abelii]
Length = 201
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 164 LEELQKRFILNLPTFSVRVIDKNGIHDLDNI 194
>gi|332248604|ref|XP_003273454.1| PREDICTED: proteasome subunit beta type-2 isoform 3 [Nomascus
leucogenys]
gi|345780639|ref|XP_003432018.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Canis lupus
familiaris]
gi|426328915|ref|XP_004025492.1| PREDICTED: proteasome subunit beta type-2 isoform 3 [Gorilla
gorilla gorilla]
Length = 167
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 10 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 69
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 70 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 129
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 130 LEELQKRFILNLPTFSVRIIDKNGIHDLDNI 160
>gi|225711516|gb|ACO11604.1| Proteasome subunit beta type-2 [Caligus rogercresseyi]
Length = 204
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 103/152 (67%), Gaps = 17/152 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ G SGDT +FAEF+ KNIQLYK+RN YE+SP AA + R+ LA+ LRSR+P++ N+L
Sbjct: 44 MSAIGQSGDTTEFAEFMTKNIQLYKLRNAYEMSPSEAANFIRRNLADSLRSRNPFHVNLL 103
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+AG D + E +L+ +DYLA +++ + THGY G+ + I+ +++
Sbjct: 104 VAGFDKKSEQAELYSMDYLAGMVKTEHATHGYGGVFSSGILDRHYKPDMTVEEGYNLLKN 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
+E+QKRLIIN+PNF V +V+KDGIK L PI
Sbjct: 164 CIAEIQKRLIINLPNFGVQIVTKDGIKSLKPI 195
>gi|395830216|ref|XP_003788230.1| PREDICTED: proteasome subunit beta type-2 [Otolemur garnettii]
Length = 201
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 102/151 (67%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRDKAVELLKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K GI L I
Sbjct: 164 LEELQKRFILNLPTFSVRIIDKSGIHELDNI 194
>gi|395730768|ref|XP_003775786.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Pongo abelii]
Length = 176
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 19 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 78
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 79 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 138
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 139 LEELQKRFILNLPTFSVRVIDKNGIHDLDNI 169
>gi|149694067|ref|XP_001503726.1| PREDICTED: proteasome subunit beta type-2-like isoform 1 [Equus
caballus]
Length = 201
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 164 LEELQKRFILNLPAFSVRIIDKNGIHELDNI 194
>gi|403293111|ref|XP_003937566.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 201
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 102/151 (67%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K GI L I
Sbjct: 164 LEELQKRFILNLPTFSVRIIDKSGIHDLDNI 194
>gi|403293113|ref|XP_003937567.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 176
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 102/151 (67%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 19 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 78
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 79 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 138
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K GI L I
Sbjct: 139 LEELQKRFILNLPTFSVRIIDKSGIHDLDNI 169
>gi|338721985|ref|XP_003364457.1| PREDICTED: proteasome subunit beta type-2-like isoform 2 [Equus
caballus]
Length = 176
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 19 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 78
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 79 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 138
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 139 LEELQKRFILNLPAFSVRIIDKNGIHELDNI 169
>gi|403293115|ref|XP_003937568.1| PREDICTED: proteasome subunit beta type-2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 167
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 102/151 (67%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 10 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 69
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 70 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 129
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K GI L I
Sbjct: 130 LEELQKRFILNLPTFSVRIIDKSGIHDLDNI 160
>gi|195147566|ref|XP_002014750.1| GL19338 [Drosophila persimilis]
gi|194106703|gb|EDW28746.1| GL19338 [Drosophila persimilis]
Length = 214
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 105/168 (62%), Gaps = 24/168 (14%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYN---- 56
++ TG+SGDT QF EFI+KNI LYKMRNGY+LSPRAAA++TRK LA+YLRSR+PY
Sbjct: 44 ISTTGESGDTEQFTEFISKNIALYKMRNGYDLSPRAAAHFTRKNLADYLRSRTPYQGLHV 103
Query: 57 ----CNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR------- 105
C + +D +G +L FIDYLA+ + + HGY + SI Y
Sbjct: 104 CRWVCFRIHQRYDETDGAELAFIDYLANAKSLNHAGHGYGAMFCSSIYDRYWHPNITQDE 163
Query: 106 ---------SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+QKRL++N+ NF V++V K+G+++L PI A+++ + N
Sbjct: 164 AYDIFKKCIVEIQKRLVVNLKNFNVSVVDKNGVRNLEPISAQSLTDYN 211
>gi|239791172|dbj|BAH72089.1| ACYPI004276 [Acyrthosiphon pisum]
gi|239792790|dbj|BAH72694.1| ACYPI004276 [Acyrthosiphon pisum]
Length = 210
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 106/160 (66%), Gaps = 17/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M VTG++GD +FAE+I +N++LY+MRNGY+LS A A +TRK +AE+LRS+SPY N +
Sbjct: 44 MGVTGEAGDVPRFAEYITQNVKLYRMRNGYDLSIPAIATFTRKTVAEHLRSQSPYQVNFM 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------- 106
+ G++P E+ L+FIDYL + +++PY HGY G++T+++M Y++
Sbjct: 104 LGGYNPTEKKSHLYFIDYLGAQVDVPYGAHGYGGMMTITVMDRYYKPDANYQEAYDLLKK 163
Query: 107 ---EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEE 143
EVQKR IIN+P FKV + G++ LP I NI ++
Sbjct: 164 CILEVQKRCIINMPKFKVKICCAGGVQELPIITKDNIEQK 203
>gi|244790059|ref|NP_001156440.1| proteasome beta 2 subunit [Acyrthosiphon pisum]
gi|239789655|dbj|BAH71438.1| ACYPI004276 [Acyrthosiphon pisum]
Length = 210
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 106/160 (66%), Gaps = 17/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M VTG++GD +FAE+I +N++LY+MRNGY+LS A A +TRK +AE+LRS+SPY N +
Sbjct: 44 MGVTGEAGDVPRFAEYITQNVKLYRMRNGYDLSIPAIATFTRKTVAEHLRSQSPYQVNFM 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------- 106
+ G++P E+ L+FIDYL + +++PY HGY G++T+++M Y++
Sbjct: 104 LGGYNPAEKKSHLYFIDYLGAQVDVPYGAHGYGGMMTITVMDRYYKPDANYQEAYDLLKK 163
Query: 107 ---EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEE 143
EVQKR IIN+P FKV + G++ LP I NI ++
Sbjct: 164 CILEVQKRCIINMPKFKVKICCAGGVQELPIITKDNIEQK 203
>gi|301763519|ref|XP_002917175.1| PREDICTED: proteasome subunit beta type-2-like [Ailuropoda
melanoleuca]
Length = 201
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 101/151 (66%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRS +PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSWTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGFDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 164 LEELQKRFILNLPTFSVRIIDKNGIHDLDNI 194
>gi|124000579|gb|ABM87798.1| proteasome (prosome, macropain) subunit, beta type, 2 [synthetic
construct]
Length = 201
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 102/151 (67%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L+++DY A+L + P+ HGY +TLSI+ Y+
Sbjct: 104 LAGYDEHEGPALYYMDYPAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELFRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKR I+N+P F V ++ K+GI L I
Sbjct: 164 LEELQKRFILNLPTFSVRIIDKNGIHDLDNI 194
>gi|209734746|gb|ACI68242.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 170
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 94/135 (69%), Gaps = 14/135 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KNIQLYKMRNGYELSP AAA +TRK LA+YLRSR+PY+ N+L
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVPNFK 120
+AG D +GP L+++D+L++L + P+ HG+ TLSI+ N+P+F
Sbjct: 104 LAGFDETDGPGLYYMDHLSALAKAPFAAHGHGAYRTLSIL--------------NLPSFS 149
Query: 121 VTMVSKDGIKHLPPI 135
V ++ KDGI L +
Sbjct: 150 VRLIDKDGIHDLEKL 164
>gi|126320684|ref|XP_001370298.1| PREDICTED: proteasome subunit beta type-2-like [Monodelphis
domestica]
Length = 183
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 101/148 (68%), Gaps = 16/148 (10%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +T + LA YLR+R+PY+ N+L+A
Sbjct: 30 VGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTHRNLAYYLRTRTPYHVNLLLAT 89
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----------------SE 107
+D EGP L+++ YLA+L + P+ HGY +TLSI+ +++ E
Sbjct: 90 YDEHEGPALYYMGYLAALAKAPFAAHGYGAFLTLSILDHFYKPSITREEAVELLKKCLEE 149
Query: 108 VQKRLIINVPNFKVTMVSKDGIKHLPPI 135
+QKR I+N+P+F V ++ KDGI L I
Sbjct: 150 LQKRFILNLPSFSVRIIDKDGIHDLDII 177
>gi|313225071|emb|CBY20864.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 100/157 (63%), Gaps = 19/157 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MAV G+ GDT F E IAKNI LY+MRNGY+++P AA +TR +LA LRSR Y N+L
Sbjct: 45 MAVCGEVGDTNFFQESIAKNIALYEMRNGYDMTPNEAACFTRHKLATSLRSRKSYQVNLL 104
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+AG+D EE P+L IDYLA+ IE PY HGY + T+SI+ ++
Sbjct: 105 VAGYDDIEEKPELHLIDYLAADIECPYGAHGYGAMFTMSILDRHYNKDKPPTREEAIALF 164
Query: 106 ----SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAK 138
E+Q+R IN+P F++ +VSKDGI+ LP +KAK
Sbjct: 165 QKCCDELQRRFSINLPLFRLKIVSKDGIEELPIVKAK 201
>gi|195437296|ref|XP_002066576.1| GK24489 [Drosophila willistoni]
gi|194162661|gb|EDW77562.1| GK24489 [Drosophila willistoni]
Length = 210
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 97/160 (60%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA GD GDT+QF+++I+KN+ LYK+ NGY LSP+AAA++TRK LA+YLR+ + Y ML
Sbjct: 46 MATVGDGGDTIQFSDYISKNLHLYKISNGYHLSPKAAAHFTRKNLADYLRTNTRYQVAML 105
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D EGP L +ID + I + HG+ I SI+ Y
Sbjct: 106 LAGYDESEGPDLHYIDSYGASQSINHAGHGWGSIFCGSILQRYWHQQLTQQEAYEILKKS 165
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+QKRLIIN+ NF V +V K G++ + PI ++ EN
Sbjct: 166 VIEIQKRLIINLRNFDVYVVDKSGMRQMEPINPGSLIHEN 205
>gi|164661781|ref|XP_001732013.1| hypothetical protein MGL_1281 [Malassezia globosa CBS 7966]
gi|159105914|gb|EDP44799.1| hypothetical protein MGL_1281 [Malassezia globosa CBS 7966]
Length = 198
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 96/150 (64%), Gaps = 21/150 (14%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR----NGYELSPRAAAYYTRKQLAEYLRSRSPYN 56
MA G+SGDT+QFAE+I +N++LY +R N +L P+AAA + R QLAE +RSR PY
Sbjct: 44 MAYAGESGDTIQFAEYIERNMRLYSIRLMLSNNIDLRPKAAASWIRSQLAEAIRSRHPYQ 103
Query: 57 CNMLIAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR---------- 105
N+L+ G+D P P L+++DYL +L+++P+ HGY +TLS M YHR
Sbjct: 104 VNLLLGGYDEPTSEPALYWVDYLGTLVQVPFAAHGYASYLTLSTMDRYHRPDMSLDEGLK 163
Query: 106 ------SEVQKRLIINVPNFKVTMVSKDGI 129
E++KR +I+V NF V ++++DG+
Sbjct: 164 LLKQCIEEMRKRFVIDVNNFNVRVITRDGV 193
>gi|320163063|gb|EFW39962.1| proteasome beta 2 subunit [Capsaspora owczarzaki ATCC 30864]
Length = 199
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 92/143 (64%), Gaps = 17/143 (11%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G SGD VQF+EFI KNI+LY+MRNG+ LSP AAA+YTR QLA LRS Y N+L+AG+
Sbjct: 48 GPSGDVVQFSEFIQKNIKLYQMRNGFALSPHAAAHYTRDQLARALRSSGAYQVNLLLAGY 107
Query: 65 DP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----------------SE 107
D + +L+F+DYLA+L+++P+ HGY LS++ Y+ +E
Sbjct: 108 DTINKQAELYFMDYLAALVKVPFGAHGYASHFVLSLLDRYYTPEVTLDEALRLMKMCIAE 167
Query: 108 VQKRLIINVPNFKVTMVSKDGIK 130
VQKRL+IN+P F V +V G +
Sbjct: 168 VQKRLVINLPKFTVRVVDAQGTR 190
>gi|327304357|ref|XP_003236870.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326459868|gb|EGD85321.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 184
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 95/156 (60%), Gaps = 17/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAEFI N QLY MRN EL P A A++ R +LA LRSRSPY N+L
Sbjct: 23 MAFSGEAGDTVQFAEFIQANTQLYSMRNQTELGPSAVAHFVRGELARSLRSRSPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P L+++DYLASL ++PY HGY LSI+ ++H
Sbjct: 83 LGGVDPITEKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISFEQGLKLLEM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKN 139
E+++RL I+ V +V+KDGI+ + +A N
Sbjct: 143 CSDELKRRLPIDFKGVLVKVVTKDGIRDVDFEQANN 178
>gi|296805171|ref|XP_002843410.1| proteasome component Pre1 [Arthroderma otae CBS 113480]
gi|238844712|gb|EEQ34374.1| proteasome component Pre1 [Arthroderma otae CBS 113480]
Length = 194
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 91/147 (61%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAEFI N QLY MRN EL P A A++ R +LA LRSRSPY N+L
Sbjct: 33 MAFSGEAGDTVQFAEFIQANTQLYSMRNQTELGPSAVAHFVRGELARSLRSRSPYTVNLL 92
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P L+++DYLASL ++PY HGY LSI+ ++H
Sbjct: 93 LGGVDPITEKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISYEQGLKLLEM 152
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
E+++RL I+ V +V+KDGIK
Sbjct: 153 CSDELKRRLPIDFKGVLVKVVTKDGIK 179
>gi|326472706|gb|EGD96715.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
Length = 184
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 94/156 (60%), Gaps = 17/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAEFI N QLY MRN EL P A A++ R +LA LRSRSPY N+L
Sbjct: 23 MAFSGEAGDTVQFAEFIQANTQLYSMRNQTELGPSAVAHFVRGELARSLRSRSPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P L+++DYLASL +PY HGY LSI+ ++H
Sbjct: 83 LGGVDPITEKPSLYWLDYLASLARVPYAAHGYAQYYCLSILDKHHHPDISFEQGLKLLEM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKN 139
E+++RL I+ V +V+KDGI+ + +A N
Sbjct: 143 CSDELKRRLPIDFKGVLVKVVTKDGIRDVDFEQANN 178
>gi|315045448|ref|XP_003172099.1| proteasome component C11 [Arthroderma gypseum CBS 118893]
gi|311342485|gb|EFR01688.1| proteasome component C11 [Arthroderma gypseum CBS 118893]
Length = 184
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 91/147 (61%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAEFI N QLY MRN EL P A A++ R +LA LRSRSPY N+L
Sbjct: 23 MAFSGEAGDTVQFAEFIQANTQLYSMRNQTELGPSAVAHFVRGELARSLRSRSPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P L+++DYLASL ++PY HGY LSI+ ++H
Sbjct: 83 LGGVDPITEKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISYEQGLKLLEM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
E+++RL I+ V +V+KDGI+
Sbjct: 143 CSDELKRRLPIDFKGVLVKVVTKDGIR 169
>gi|357620210|gb|EHJ72490.1| proteasome beta 2 subunit-like protein [Danaus plexippus]
Length = 209
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 94/152 (61%), Gaps = 16/152 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ V G +GD VQF +F+AKN++LY+MRN Y L RA ++TRK +A+ LR +P N+L
Sbjct: 51 LGVNGTTGDIVQFTQFVAKNLRLYEMRNKYGLDSRAVIHFTRKIMADGLRDGNPCLLNVL 110
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D E G QL+ +D+LAS + P+ HG G ++LSI+ Y++
Sbjct: 111 MAGYDDEAGSQLYSMDFLASYVSAPFAVHGLGGFLSLSILDNYYKPTLTEIEAYEVIKLC 170
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIK 136
SE+Q RL +N+ NF V V+K G+K LP I
Sbjct: 171 VSEIQNRLFLNLSNFGVKSVTKWGVKTLPTIN 202
>gi|393233954|gb|EJD41521.1| proteasome component Pre1 [Auricularia delicata TFB-10046 SS5]
Length = 194
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 94/149 (63%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GDTVQFAE++ +N++LY++RN + L P +AA + R+ LA+ LRSRSPY+ N+L
Sbjct: 44 MTYSGEPGDTVQFAEYVERNLRLYQIRNHHALRPHSAASWIRRTLADSLRSRSPYSVNLL 103
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D E P L++IDYL ++ +P+ HGY LS++ YH
Sbjct: 104 VGGYDTSEHQPHLYWIDYLGTMATVPFAAHGYGSYFALSLLDRYHNPDASLEEGIEVLKR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EVQKRLI+ + FKV +V KDG++ +
Sbjct: 164 CIDEVQKRLIVGLGKFKVRVVDKDGVREI 192
>gi|326482048|gb|EGE06058.1| proteasome component C11 [Trichophyton equinum CBS 127.97]
Length = 184
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 93/156 (59%), Gaps = 17/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAEFI N QLY MRN EL P A A++ R +LA LRSR PY N+L
Sbjct: 23 MAFSGEAGDTVQFAEFIQANTQLYSMRNQTELGPSAVAHFVRGELARSLRSRRPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P L+++DYLASL +PY HGY LSI+ ++H
Sbjct: 83 LGGVDPITEKPSLYWLDYLASLARVPYAAHGYAQYYCLSILDKHHHPDISFEQGLKLLEM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKN 139
E+++RL I+ V +V+KDGI+ + +A N
Sbjct: 143 CSDELKRRLPIDFKGVLVKVVTKDGIRDVDFEQANN 178
>gi|115398077|ref|XP_001214630.1| proteasome component C11 [Aspergillus terreus NIH2624]
gi|114192821|gb|EAU34521.1| proteasome component C11 [Aspergillus terreus NIH2624]
Length = 182
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 90/150 (60%), Gaps = 17/150 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAEFI NIQLY MRN EL A A + R +LA LRSRSPY N+L
Sbjct: 23 MAFSGEAGDTVQFAEFIQANIQLYTMRNDTELRSNAVANFVRGELARSLRSRSPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P LF+IDYLASL +PY HGY LS + ++H
Sbjct: 83 LGGVDPISEKPHLFWIDYLASLAPVPYAAHGYAQYYCLSTLDKHHHPDITLEEGMKLLEM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+++RL I+ V +V+KDG++ +P
Sbjct: 143 CTDELKRRLPIDYKGVLVKVVTKDGVREVP 172
>gi|255950050|ref|XP_002565792.1| Pc22g18890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592809|emb|CAP99177.1| Pc22g18890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 203
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 91/150 (60%), Gaps = 17/150 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+SGDTVQFAE+I N LY MRN ELSP A A + R +LA LRSRSPY N+L
Sbjct: 44 MAFSGESGDTVQFAEYIQANAALYSMRNDTELSPSAVANFVRGELARSLRSRSPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P L+++DYLASL +PY HGY LSI+ ++H
Sbjct: 104 LGGIDPVTEKPHLYWVDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDCSLEEGLALLTL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+++RL I+ V +V+KDG++ +P
Sbjct: 164 CTDELKRRLPIDYKGMLVKVVTKDGVREIP 193
>gi|194770481|ref|XP_001967321.1| GF13881 [Drosophila ananassae]
gi|190618083|gb|EDV33607.1| GF13881 [Drosophila ananassae]
Length = 210
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 95/159 (59%), Gaps = 16/159 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA GD GDT+QF ++I+KN+ LYK+ +GY LS +AAA++TRK LA+Y+R+ + Y+ ML
Sbjct: 46 MATVGDGGDTIQFTDYISKNLHLYKIAHGYHLSAKAAAHFTRKNLADYIRTNTRYHVAML 105
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D EGP L +ID L + I + HG+ + SI+ + S
Sbjct: 106 LAGYDAAEGPDLHYIDSLGAAQSINHAGHGWGSMFCGSILQRFWHSKLTQAEAYSILRKC 165
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEE 143
E+QKRLIIN NF V +V K G++ + I ++ E
Sbjct: 166 VVEIQKRLIINQRNFDVYVVDKKGMRKMEAINPGSLSRE 204
>gi|452837651|gb|EME39593.1| hypothetical protein DOTSEDRAFT_56927 [Dothistroma septosporum
NZE10]
Length = 203
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 94/157 (59%), Gaps = 17/157 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I NIQLY MRN +L+P A + R +LA+ LRSRSPYN N+L
Sbjct: 44 MAFSGEAGDTVQFAEYIQANIQLYSMRNSTDLTPYETASFVRSELAKSLRSRSPYNVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D PQL++IDYLAS +PY HGY LSI+ ++H
Sbjct: 104 LGGFDDISNKPQLYWIDYLASCAPLPYAAHGYAQYYCLSILDKHHHPDISFEQGMKILRM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
E+++RL I+ V +V+KDGI+ P + K +
Sbjct: 164 CTDELKRRLPIDFKGVLVKVVTKDGIREEPYVDDKQV 200
>gi|336372669|gb|EGO01008.1| hypothetical protein SERLA73DRAFT_179029 [Serpula lacrymans var.
lacrymans S7.3]
gi|336385526|gb|EGO26673.1| hypothetical protein SERLADRAFT_463954 [Serpula lacrymans var.
lacrymans S7.9]
Length = 194
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 95/149 (63%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTVQFAEF+ +NI+LY++RN Y L P AAA + R+ LA+ LRSRSPY+ N+L
Sbjct: 44 MAYSGEPGDTVQFAEFVERNIRLYQIRNLYPLRPSAAASWIRRSLADSLRSRSPYSVNLL 103
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D P+L++IDYL + +++P+ HGY LS++ YH
Sbjct: 104 VGGYDTATHEPKLYWIDYLGTQVDVPFGAHGYGSYFALSLLDRYHDPEASLEEGLATLKR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV KRL+++ +KV +V KDG++ +
Sbjct: 164 CVDEVAKRLVVSPGRYKVKVVDKDGVREV 192
>gi|440635645|gb|ELR05564.1| proteasome subunit beta type-2 [Geomyces destructans 20631-21]
Length = 203
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 93/149 (62%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDT+QFAE+I N QLY MRN +LSP A A + R QLA LRSR+PYN N+L
Sbjct: 44 MAFSGEAGDTIQFAEYIQANAQLYSMRNQIDLSPSAVANFVRGQLASSLRSRNPYNVNLL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP G P L+++DYLASL ++PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITGKPSLYWLDYLASLAQLPYAAHGYAQYYCLSILDKHHHPDIDFEQGMKILRL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL ++ V +++KDGI+ +
Sbjct: 164 CTDELKRRLPVDFKGMLVKVITKDGIREV 192
>gi|347841546|emb|CCD56118.1| Probable proteasome subunit beta type 2 [Botryotinia fuckeliana]
Length = 237
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 93/149 (62%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDT+QFAE+I N QLY MRN +LSP A A++ R +LA+ LRSR PYN N+L
Sbjct: 78 MAFSGEAGDTIQFAEYIQANAQLYSMRNNIDLSPSAVAHFVRGELAQSLRSRKPYNVNLL 137
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP + P L+++DYLASL +PY HGY LSI+ ++H
Sbjct: 138 LGGVDPITDKPSLYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDIDFEQGMKVLRM 197
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +++K+GIK L
Sbjct: 198 CTDELKRRLPIDFKGMTVKVITKEGIKEL 226
>gi|388582725|gb|EIM23029.1| N-terminal nucleophile aminohydrolase [Wallemia sebi CBS 633.66]
Length = 194
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 94/149 (63%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA G++GDT+QFAE++ +N++L+ +R+ EL P+A+A + R+QLA+ LRSR PY N+L
Sbjct: 44 MAYNGEAGDTIQFAEYVERNLRLHSLRHDIELQPKASASWIRRQLADSLRSRKPYAVNLL 103
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D P+ P+L++IDYL +L +PY HGY S YHR
Sbjct: 104 LGGWDVPKGTPELYWIDYLGTLAHVPYACHGYAAFFATSTFDRYHRPDMSLEEGLELMKR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
+EV+KRLI+N +K ++++DG++ +
Sbjct: 164 ATNEVEKRLIVNPGGWKARIITQDGVREV 192
>gi|156053566|ref|XP_001592709.1| hypothetical protein SS1G_05630 [Sclerotinia sclerotiorum 1980]
gi|154703411|gb|EDO03150.1| hypothetical protein SS1G_05630 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 203
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 93/149 (62%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDT+QFAE+I N QLY MRN +LSP A A++ R +LA+ LRSR PYN N+L
Sbjct: 44 MAFSGEAGDTIQFAEYIQANAQLYSMRNNIDLSPSAVAHFVRGELAQSLRSRKPYNVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP + P L+++DYLASL +PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITDKPSLYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDIDFEQGMKVLRM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +++K+GIK L
Sbjct: 164 CTDELKRRLPIDFKGMTVKVITKEGIKEL 192
>gi|336266886|ref|XP_003348210.1| hypothetical protein SMAC_04055 [Sordaria macrospora k-hell]
Length = 209
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N QLY MRN +LSP A A++ R +LA LRSR PYN N+L
Sbjct: 50 MAFSGEAGDTVQFAEYIQANAQLYSMRNETDLSPSALAHFVRGELATSLRSRKPYNVNLL 109
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L+++DYLASL E+PY HGY LSI+ ++H
Sbjct: 110 LGGVDPITHKPSLYWLDYLASLAEVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKLLNM 169
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V V+KDGI
Sbjct: 170 CTDELKRRLPIDFKGMTVKAVTKDGI 195
>gi|380091145|emb|CCC11352.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 203
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N QLY MRN +LSP A A++ R +LA LRSR PYN N+L
Sbjct: 44 MAFSGEAGDTVQFAEYIQANAQLYSMRNETDLSPSALAHFVRGELATSLRSRKPYNVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L+++DYLASL E+PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITHKPSLYWLDYLASLAEVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKLLNM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V V+KDGI
Sbjct: 164 CTDELKRRLPIDFKGMTVKAVTKDGI 189
>gi|170089715|ref|XP_001876080.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164649340|gb|EDR13582.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 194
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 93/149 (62%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTVQFAE++ +NI+LY++RN Y L P AAA + R+ LAE LRSR PY+ N+L
Sbjct: 44 MAYSGEPGDTVQFAEYVERNIRLYQIRNLYPLRPSAAASWIRRALAESLRSRKPYSVNLL 103
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D P L++IDYL ++ E+P+ HGY LS++ YH
Sbjct: 104 LGGYDTASHDPHLYWIDYLGTMTEVPFAAHGYGSYFALSLLDRYHNPEATIEEGLATLKR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV KRL+++ +KV +V +DGI+ +
Sbjct: 164 CIDEVAKRLVVSPGKYKVKIVDQDGIREV 192
>gi|240281182|gb|EER44685.1| proteasome component [Ajellomyces capsulatus H143]
Length = 227
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 91/150 (60%), Gaps = 17/150 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N+QLY MRN ELSP A A + R +LA LRSR PY N+L
Sbjct: 68 MAFSGEAGDTVQFAEYIQANVQLYSMRNEAELSPSAVASFVRGELARSLRSRRPYTVNLL 127
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P L+++DYLA+L +PY HGY LSI+ ++H
Sbjct: 128 LGGVDPITEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLEQGLKLLEM 187
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+++RL I+ V +V KDGI+ +P
Sbjct: 188 CTDELKRRLPIDFKGVLVKVVRKDGIEEVP 217
>gi|425781825|gb|EKV19769.1| Proteasome subunit beta type [Penicillium digitatum PHI26]
gi|425782955|gb|EKV20833.1| Proteasome subunit beta type [Penicillium digitatum Pd1]
Length = 182
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 91/150 (60%), Gaps = 17/150 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+SGDTVQFAE+I N LY MRN ELSP A A + R +LA LRSRSPY N+L
Sbjct: 23 MAFSGESGDTVQFAEYIQANATLYSMRNDTELSPSAVANFVRGELASSLRSRSPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P L++IDYLASL +PY HGY L+I+ ++H
Sbjct: 83 LGGIDPVTEKPHLYWIDYLASLAPLPYAAHGYAQYYCLAILDKHHHPDCSLEEGLALLTL 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+++RL I+ V +V+KDG++ +P
Sbjct: 143 CTDELKRRLPIDYKGMLVKVVTKDGVQEIP 172
>gi|325092320|gb|EGC45630.1| proteasome component [Ajellomyces capsulatus H88]
Length = 805
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 91/150 (60%), Gaps = 17/150 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N+QLY MRN ELSP A A + R +LA LRSR PY N+L
Sbjct: 23 MAFSGEAGDTVQFAEYIQANVQLYSMRNEAELSPSAVASFVRGELARSLRSRRPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P L+++DYLA+L +PY HGY LSI+ ++H
Sbjct: 83 LGGVDPITEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLEQGLKLLEM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+++RL I+ V +V KDGI+ +P
Sbjct: 143 CTDELKRRLPIDFKGVLVKVVRKDGIEEVP 172
>gi|154279090|ref|XP_001540358.1| proteasome component Pre1 [Ajellomyces capsulatus NAm1]
gi|150412301|gb|EDN07688.1| proteasome component Pre1 [Ajellomyces capsulatus NAm1]
Length = 203
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 91/150 (60%), Gaps = 17/150 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N+QLY MRN ELSP A A + R +LA LRSR PY N+L
Sbjct: 44 MAFSGEAGDTVQFAEYIQANVQLYSMRNEAELSPSAVASFVRGELARSLRSRRPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P L+++DYLA+L +PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLEQGLMLLEM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+++RL I+ V +V KDGI+ +P
Sbjct: 164 CTDELKRRLPIDFKGVLVKVVRKDGIEEVP 193
>gi|254566233|ref|XP_002490227.1| Beta 4 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|238030023|emb|CAY67946.1| Beta 4 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|328350622|emb|CCA37022.1| 20S proteasome subunit beta 4 [Komagataella pastoris CBS 7435]
Length = 196
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA TG+SGDTVQFAE+I NIQLY MR G+ELSP A +++ R LA+ LRSR PY N L
Sbjct: 44 MAFTGESGDTVQFAEYIQANIQLYNMREGHELSPYAVSHFVRNTLAKSLRSRKPYQVNAL 103
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+AG+D + + P L +IDYL + ++PY HGY TLS++ ++R
Sbjct: 104 LAGYDTDKKTPSLSWIDYLGTKADLPYAAHGYAAFYTLSLLDHHYRKDMTVEDGLRLLKL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
E+ R+ I+ +V +V+KDG+K
Sbjct: 164 CNKELNTRMPIDFKGLQVKVVNKDGVK 190
>gi|169601414|ref|XP_001794129.1| hypothetical protein SNOG_03572 [Phaeosphaeria nodorum SN15]
gi|160705926|gb|EAT88777.2| hypothetical protein SNOG_03572 [Phaeosphaeria nodorum SN15]
Length = 203
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 91/149 (61%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G++GDTVQFAEFI NIQLY MRNG ELSP A A + R +LA LRSR PY N+L
Sbjct: 44 MTFSGEAGDTVQFAEFIQANIQLYSMRNGMELSPAATANFVRGELATALRSRRPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D + P L++IDYLASL +PY HGY LS++ ++H
Sbjct: 104 LGGYDSIADKPTLYWIDYLASLAPVPYAAHGYAQYYCLSLLDKHHHPDIDYEQGIKIMRM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +++KDGIK +
Sbjct: 164 CTEELKRRLPIDFKGVFVKVITKDGIKDV 192
>gi|62088520|dbj|BAD92707.1| proteasome beta 2 subunit variant [Homo sapiens]
Length = 249
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 85/110 (77%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 76 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 135
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQK 110
+AG+D EGP L+++DYLA+L + P+ HGY +TLSI+ Y+ + +
Sbjct: 136 LAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISR 185
>gi|225562344|gb|EEH10623.1| proteasome component C11 [Ajellomyces capsulatus G186AR]
Length = 805
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 91/150 (60%), Gaps = 17/150 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N+QLY MRN ELSP A A + R +LA LRSR PY N+L
Sbjct: 1 MAFSGEAGDTVQFAEYIQANVQLYSMRNEAELSPSAVASFVRGELARSLRSRRPYTVNLL 60
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P L+++DYLA+L +PY HGY LSI+ ++H
Sbjct: 61 LGGVDPITEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLEQGLKLLEM 120
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+++RL I+ V +V KDGI+ +P
Sbjct: 121 CTDELKRRLPIDFKGVLVKVVRKDGIEEVP 150
>gi|449546189|gb|EMD37159.1| 20S proteasome subunit [Ceriporiopsis subvermispora B]
Length = 194
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 93/149 (62%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTVQFAEFI +NI+LY +RN + L P++AA + R+ LA+ +RSR PY N+L
Sbjct: 44 MAYSGEPGDTVQFAEFIERNIRLYHIRNPHPLRPQSAASWIRRSLADSIRSRRPYAVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+DP E P L+++DYL ++ E+P+ HGY LS++ YH
Sbjct: 104 VGGYDPAEHAPHLYWMDYLGTMAEVPFAAHGYGAYFALSLLDRYHDPEANLEEGIATLKK 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV +RL++ +KV +V KDG++ +
Sbjct: 164 CIDEVAQRLVVAPGKYKVKVVDKDGVREI 192
>gi|50289565|ref|XP_447214.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526523|emb|CAG60147.1| unnamed protein product [Candida glabrata]
Length = 194
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 94/149 (63%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M TG++GDTVQFAE+I N+QLY +R YELSP A + Y R++LA+ +RSR PY N+L
Sbjct: 44 MTFTGEAGDTVQFAEYIQANMQLYSIRENYELSPSAVSSYVRQELAKSIRSRKPYQVNVL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D +E P+L+ IDYL + +++PY HGY G T S++ ++R
Sbjct: 104 IGGYDTKKEKPELYQIDYLGTKVDLPYAAHGYSGFYTFSLLDHHYRPDMTTTEGLELLKL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
+E+QKR+ I+ V +V KDG++ +
Sbjct: 164 CIAELQKRMPIDFKGVIVKIVDKDGVREV 192
>gi|303314849|ref|XP_003067433.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240107101|gb|EER25288.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320037788|gb|EFW19725.1| proteasome component Pre1 [Coccidioides posadasii str. Silveira]
Length = 205
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 92/149 (61%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G++GDTVQFAE+I N QLY MRN ELSP A A + R +LA LRSRSPY N+L
Sbjct: 44 LAYSGEAGDTVQFAEYIQANAQLYSMRNETELSPSAVANFVRGELARSLRSRSPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP + P L+++DYLASL ++PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITQKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISYEEGLKLLEK 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +V+KDGIK +
Sbjct: 164 CTDELKRRLPIDFKGVFVKVVTKDGIKEV 192
>gi|409047335|gb|EKM56814.1| hypothetical protein PHACADRAFT_254139 [Phanerochaete carnosa
HHB-10118-sp]
Length = 194
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 93/149 (62%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTVQFAE+I +NI+LY +RN + L P +AA + R+ LA+ LRSR PY+ N+L
Sbjct: 44 MAYSGEPGDTVQFAEYIERNIRLYHIRNNFPLRPPSAASWIRRSLADSLRSRKPYSVNLL 103
Query: 61 IAGHDPEE-GPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D P L+++DY +L E+P+ HGY TLS++ +YH
Sbjct: 104 LGGYDTSTYMPHLYWMDYFGTLAEVPFAAHGYGSYFTLSLLDKYHDPEATVEEGIATLKR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV KRL+++ FKV +V KDG++ +
Sbjct: 164 CIDEVSKRLVVSPARFKVKIVDKDGVREI 192
>gi|409078521|gb|EKM78884.1| hypothetical protein AGABI1DRAFT_114444 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426199530|gb|EKV49455.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
Length = 194
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 93/149 (62%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GDTVQFAE+I +N++LY++RN Y L P AA+ + R+ LAE LRSR PY+ N+L
Sbjct: 44 MTYSGEPGDTVQFAEYIERNLRLYQIRNIYPLRPAAASSWIRRSLAESLRSRHPYSVNLL 103
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D P+L++IDYL ++ E+P+ HGY LS+M YH
Sbjct: 104 LGGYDTSLSEPKLYWIDYLGTVTEVPFAAHGYGSYFVLSLMDRYHDPEAPLEEGLETLKK 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV KRLI++ +KV +V KDG++ +
Sbjct: 164 CIQEVSKRLIVSPERYKVKIVDKDGVRDI 192
>gi|361127842|gb|EHK99799.1| putative proteasome subunit beta type-2 [Glarea lozoyensis 74030]
Length = 203
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 91/149 (61%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDT+QFAE+I N QLY MRNG +LSP A A + R +LA LRSR PYN N+L
Sbjct: 44 MAFSGEAGDTIQFAEYIQANAQLYSMRNGIDLSPSAVANFVRGELASSLRSRKPYNVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L+++DYLASL +PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITLKPSLYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDIDYEQGLKILRM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +++KDGIK +
Sbjct: 164 CTDELKRRLPIDFKGMLVKVITKDGIKEV 192
>gi|392560502|gb|EIW53685.1| N-terminal nucleophile aminohydrolase [Trametes versicolor
FP-101664 SS1]
Length = 194
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 92/149 (61%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTVQFAE+I +NI+LY++RN Y L P +AA + R+ LA+ LRSR PY+ N+L
Sbjct: 44 MAFSGEPGDTVQFAEYIERNIRLYQIRNTYALRPPSAASWIRRALADSLRSRRPYSVNLL 103
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D P L+++DYL ++ E+P+ HGY LS++ YH
Sbjct: 104 VGGYDTSTHTPHLYWVDYLGTMSEVPFAAHGYGAYFALSLLDRYHDPEASLEEGLATLRR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV KRL++ +KV +V KDG++ +
Sbjct: 164 CLDEVAKRLVVTPEKYKVKVVDKDGVREV 192
>gi|164426284|ref|XP_960720.2| proteasome component C11 [Neurospora crassa OR74A]
gi|157071273|gb|EAA31484.2| proteasome component C11 [Neurospora crassa OR74A]
Length = 240
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 88/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+ N QLY MRNG +LSP A A + R +LA LRSR PYN N+L
Sbjct: 81 MAFSGEAGDTVQFAEYTQANAQLYSMRNGTDLSPSALANFVRGELATSLRSRKPYNVNLL 140
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L+++DYLASL ++PY HGY LSI+ ++H
Sbjct: 141 LGGVDPITHKPSLYWLDYLASLAKVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKLLNL 200
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V V+KDGI
Sbjct: 201 CTDELKRRLPIDFKGMTVKAVTKDGI 226
>gi|395327253|gb|EJF59654.1| N-terminal nucleophile aminohydrolase [Dichomitus squalens LYAD-421
SS1]
Length = 194
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 92/149 (61%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTVQFAE++ +NI+LY++RN + L P +AA + R+ LA+ LRSR PY N+L
Sbjct: 44 MAYSGEPGDTVQFAEYVERNIRLYQIRNTHALRPPSAASWIRRTLADSLRSRKPYAVNLL 103
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D P L++IDYL ++ E+P+ HGY LS++ YH
Sbjct: 104 VGGYDTSTHNPHLYWIDYLGTMSEVPFAAHGYGAYFALSLLDRYHDPEASVEEGLATLKR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV KRL++N +KV +V KDG++ +
Sbjct: 164 CIDEVAKRLVVNPEKYKVKIVDKDGVREV 192
>gi|156836888|ref|XP_001642484.1| hypothetical protein Kpol_322p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156113019|gb|EDO14626.1| hypothetical protein Kpol_322p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 195
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 93/149 (62%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ TG++GDTVQFAE+I NIQLY +R YEL+P A + + RK+LA+ LRSR PY N+L
Sbjct: 44 MSFTGEAGDTVQFAEYIQANIQLYSIRENYELTPHAVSSFVRKELAKSLRSRKPYQVNVL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D + P+L+ IDYL + +E+PY HGY G T S++ ++R
Sbjct: 104 IGGYDTKNAKPELYQIDYLGTKVELPYAAHGYSGFYTFSLLDHHYRPDMSLEEGLKLLKL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
+E+ KR+ ++ V +V KDGI+ +
Sbjct: 164 CIAELDKRMPVDFKGVIVKVVDKDGIREV 192
>gi|336472552|gb|EGO60712.1| hypothetical protein NEUTE1DRAFT_115844 [Neurospora tetrasperma
FGSC 2508]
gi|350294216|gb|EGZ75301.1| putative proteasome subunit beta type-2 [Neurospora tetrasperma
FGSC 2509]
Length = 203
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 88/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+ N QLY MRNG +LSP A A + R +LA LRSR PYN N+L
Sbjct: 44 MAFSGEAGDTVQFAEYTQANAQLYSMRNGTDLSPSALANFVRGELATSLRSRKPYNVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L+++DYLASL ++PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITHKPSLYWLDYLASLAKVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKLLNL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V V+KDGI
Sbjct: 164 CTDELKRRLPIDFKGMTVKAVTKDGI 189
>gi|17380220|sp|Q9P6U7.1|PSB4_NEUCR RecName: Full=Probable proteasome subunit beta type-4
gi|7635833|emb|CAB88637.1| probable multicatalytic endopeptidase complex chain PRE1
[Neurospora crassa]
Length = 203
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 88/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+ N QLY MRNG +LSP A A + R +LA LRSR PYN N+L
Sbjct: 44 MAFSGEAGDTVQFAEYTQANAQLYSMRNGTDLSPSALANFVRGELATSLRSRKPYNVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L+++DYLASL ++PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITHKPSLYWLDYLASLAKVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKLLNL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V V+KDGI
Sbjct: 164 CTDELKRRLPIDFKGMTVKAVTKDGI 189
>gi|195086146|ref|XP_001997426.1| GH22171 [Drosophila grimshawi]
gi|193906293|gb|EDW05160.1| GH22171 [Drosophila grimshawi]
Length = 222
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 91/151 (60%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A GD GDT+QF +++AK++QLY++ NGY LSPR AA+YTRK LA+Y+R+ + Y +ML
Sbjct: 44 LAAVGDGGDTLQFTDYVAKHLQLYRISNGYHLSPRGAAHYTRKNLADYIRTNTRYQVSML 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D EG L +ID + + I + HG + SI Y R
Sbjct: 104 MAGYDAIEGSDLHYIDSYGASMSINHAGHGLGSLFCGSIFQRYWREDLSQAEAYEILQMC 163
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKRL+IN+ NF V +V ++G + L I
Sbjct: 164 VVEIQKRLVINLRNFDVFVVDQNGTQQLESI 194
>gi|169869498|ref|XP_001841312.1| proteasome component Pre1 [Coprinopsis cinerea okayama7#130]
gi|116497590|gb|EAU80485.1| proteasome component Pre1 [Coprinopsis cinerea okayama7#130]
Length = 194
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 92/149 (61%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTVQFAE+ +NI+LY++RN Y L P AAA + R+ LA+ LRSR+PY+ N+L
Sbjct: 44 MAYSGEPGDTVQFAEYAERNIRLYQIRNTYALRPSAAASWIRRALADSLRSRNPYSVNLL 103
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D P L++IDYL ++ +P+ HGY LS++ YH
Sbjct: 104 LGGYDTATHDPHLYWIDYLGTITRVPFAAHGYGAYFALSLLDRYHNPEASLEEGLETLKR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV KRL+++ +KV +V KDG++ +
Sbjct: 164 CIDEVAKRLVVSPGKYKVKVVDKDGVREI 192
>gi|195032049|ref|XP_001988430.1| GH11159 [Drosophila grimshawi]
gi|193904430|gb|EDW03297.1| GH11159 [Drosophila grimshawi]
Length = 222
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 91/151 (60%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A GD GDT+QF +++AK++QLY++ NGY LSPR AA+YTRK LA+Y+R+ + Y +ML
Sbjct: 44 LAAVGDGGDTLQFTDYVAKHLQLYRISNGYHLSPRGAAHYTRKNLADYIRTNTIYQVSML 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D EG L +ID + + I + HG + SI Y R
Sbjct: 104 MAGYDAIEGSDLHYIDSYGASMSINHAGHGLGSLFCGSIFQRYWREDLSQAEAYEILQMC 163
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+QKRL+IN+ NF V +V ++G + L I
Sbjct: 164 VVEIQKRLVINLRNFDVFVVDQNGTQQLESI 194
>gi|366993743|ref|XP_003676636.1| hypothetical protein NCAS_0E02070 [Naumovozyma castellii CBS 4309]
gi|342302503|emb|CCC70277.1| hypothetical protein NCAS_0E02070 [Naumovozyma castellii CBS 4309]
Length = 195
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 92/149 (61%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ TG+SGDTVQFAE+I NIQLY +R YELSP+A + + R++LA+ +RSR PY N+L
Sbjct: 44 MSFTGESGDTVQFAEYIQANIQLYAIREDYELSPKAVSSFVRQELAKSIRSRKPYQVNVL 103
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G D + P L+ IDYL + +E+PY HGY G T S++ ++R
Sbjct: 104 IGGFDSKLNKPNLYQIDYLGTKVELPYAAHGYSGFYTFSLLDHHYRPDMTTEEGLKLLKL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++R+ ++ V +V KDGI+ L
Sbjct: 164 CIEELERRMPVDFKGVYVKIVDKDGIRQL 192
>gi|389746431|gb|EIM87611.1| 20S proteasome subunit [Stereum hirsutum FP-91666 SS1]
Length = 197
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 95/152 (62%), Gaps = 20/152 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTV FAE++ +N++LY++RN Y L P++AA + R+ LAE LRSR PY+ N+L
Sbjct: 44 MAYSGEPGDTVHFAEYVERNLRLYQIRNVYPLRPQSAASWVRRSLAESLRSRHPYSVNLL 103
Query: 61 IAGHDPEEG----PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----------- 105
+ G+D + G P L+++DYL ++ +P+ HGY LS++ YH
Sbjct: 104 LGGYDTQAGEEGEPHLYWLDYLGTMASVPFAAHGYGSYFALSLLDRYHNPDGTLEEGLDV 163
Query: 106 -----SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV KRL+++ ++KV +V KDGI+ +
Sbjct: 164 LRRAIDEVAKRLVVSPGSYKVKVVDKDGIREI 195
>gi|408388365|gb|EKJ68051.1| hypothetical protein FPSE_11862 [Fusarium pseudograminearum CS3096]
Length = 213
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G++GDTVQFAE+I +N QLY MRN +LSP A A++ R +LA LRSR PYN N+L
Sbjct: 54 LAFSGEAGDTVQFAEYIQRNAQLYSMRNESDLSPSALAHFVRGELATSLRSRKPYNVNLL 113
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP G P L+++DYLASL E+PY HGY LSI+ ++H
Sbjct: 114 MGGVDPITGKPSLYWLDYLASLAEVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKILTM 173
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V V DGI
Sbjct: 174 CIDELKRRLPIDFKGMVVKAVKADGI 199
>gi|241604606|ref|XP_002405427.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
gi|215500625|gb|EEC10119.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
Length = 203
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 98/160 (61%), Gaps = 20/160 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAE-YLRSRSPYNCNM 59
MAV G++GDTVQFAEFIAKNIQLYKMRNG L P + + E + + +PY+ N+
Sbjct: 44 MAVCGEAGDTVQFAEFIAKNIQLYKMRNGRSLLPPFLFSSILEFIVENWSFAATPYSVNL 103
Query: 60 LIAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------ 106
L+AG D + P+LF++DYLA++ ++PY HGY +S++ Y+R
Sbjct: 104 LLAGFDKQAAQPELFYMDYLATMAKVPYGAHGYGAFFLISVLDRYYREDMNEEEAVDLLK 163
Query: 107 ----EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPE 142
EVQKR ++N+P FKV +V K+GI+ L I +PE
Sbjct: 164 KCVFEVQKRFLVNLPAFKVQVVDKNGIRTLKDISV--LPE 201
>gi|145256902|ref|XP_001401555.1| proteasome subunit beta type-2 [Aspergillus niger CBS 513.88]
gi|134058465|emb|CAL00674.1| unnamed protein product [Aspergillus niger]
Length = 203
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 91/150 (60%), Gaps = 17/150 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I NIQLY MRN EL P A A + R ++A LRSR+PY N+L
Sbjct: 44 MAFSGEAGDTVQFAEYIQANIQLYTMRNDTELGPSAVASFVRGEMARSLRSRNPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP + P L++IDYLASL +PY HGY LS + ++H
Sbjct: 104 LGGVDPITQKPHLYWIDYLASLAPVPYAAHGYAQYYCLSTLDKHHHPDISLEEGMKLLEM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+++RL I+ V +V+KDG++ +P
Sbjct: 164 CTDELKRRLPIDYKGVLVKIVTKDGVQEVP 193
>gi|6320849|ref|NP_010928.1| proteasome core particle subunit beta 4 [Saccharomyces cerevisiae
S288c]
gi|730378|sp|P22141.2|PSB4_YEAST RecName: Full=Proteasome subunit beta type-4; AltName:
Full=Macropain subunit C11; AltName: Full=Multicatalytic
endopeptidase complex subunit C11; AltName:
Full=Proteasome component C11; AltName: Full=Proteinase
YSCE subunit 11
gi|3114279|pdb|1RYP|K Chain K, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114293|pdb|1RYP|Y Chain Y, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513422|pdb|1G65|J Chain J, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513436|pdb|1G65|X Chain X, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11514001|pdb|1G0U|J Chain J, A Gated Channel Into The Proteasome Core Particle
gi|11514015|pdb|1G0U|X Chain X, A Gated Channel Into The Proteasome Core Particle
gi|14488815|pdb|1FNT|K Chain K, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488829|pdb|1FNT|Y Chain Y, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|20150386|pdb|1JD2|J Chain J, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150393|pdb|1JD2|Q Chain Q, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|75765709|pdb|1Z7Q|K Chain K, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765723|pdb|1Z7Q|Y Chain Y, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|93279377|pdb|2F16|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279391|pdb|2F16|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032211|pdb|2FAK|J Chain J, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032225|pdb|2FAK|X Chain X, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490852|pdb|2GPL|J Chain J, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490866|pdb|2GPL|X Chain X, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|178847469|pdb|2ZCY|J Chain J, Yeast 20s Proteasome:syringolin A-Complex
gi|178847483|pdb|2ZCY|X Chain X, Yeast 20s Proteasome:syringolin A-Complex
gi|178847511|pdb|3BDM|J Chain J, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847525|pdb|3BDM|X Chain X, Yeast 20s Proteasome:glidobactin A-Complex
gi|190016376|pdb|3D29|J Chain J, Proteasome Inhibition By Fellutamide B
gi|190016390|pdb|3D29|X Chain X, Proteasome Inhibition By Fellutamide B
gi|197725330|pdb|3E47|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725344|pdb|3E47|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939221|pdb|3DY3|J Chain J, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939235|pdb|3DY3|X Chain X, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939249|pdb|3DY4|J Chain J, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939263|pdb|3DY4|X Chain X, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828246|pdb|3GPJ|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828260|pdb|3GPJ|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588330|pdb|3GPT|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588344|pdb|3GPT|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588358|pdb|3GPW|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588372|pdb|3GPW|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588552|pdb|3HYE|J Chain J, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588566|pdb|3HYE|X Chain X, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508232|pdb|1VSY|K Chain K, Proteasome Activator Complex
gi|298508246|pdb|1VSY|Y Chain Y, Proteasome Activator Complex
gi|298508448|pdb|3L5Q|O Chain O, Proteasome Activator Complex
gi|298508462|pdb|3L5Q|1 Chain 1, Proteasome Activator Complex
gi|323462945|pdb|3NZJ|J Chain J, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462959|pdb|3NZJ|X Chain X, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462973|pdb|3NZW|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462987|pdb|3NZW|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463001|pdb|3NZX|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463015|pdb|3NZX|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|330689390|pdb|3MG4|J Chain J, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689404|pdb|3MG4|X Chain X, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361153|pdb|3MG0|J Chain J, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361167|pdb|3MG0|X Chain X, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361181|pdb|3MG6|J Chain J, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361195|pdb|3MG6|X Chain X, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361209|pdb|3MG7|J Chain J, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361223|pdb|3MG7|X Chain X, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361237|pdb|3MG8|J Chain J, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361251|pdb|3MG8|X Chain X, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|335892350|pdb|3OKJ|J Chain J, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892364|pdb|3OKJ|X Chain X, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780428|pdb|3OEU|J Chain J, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780442|pdb|3OEU|X Chain X, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780456|pdb|3OEV|J Chain J, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780470|pdb|3OEV|X Chain X, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610681|pdb|3TDD|J Chain J, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610695|pdb|3TDD|X Chain X, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545855|pdb|3SHJ|J Chain J, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545869|pdb|3SHJ|X Chain X, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|378792250|pdb|3UN4|J Chain J, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792264|pdb|3UN4|X Chain X, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792284|pdb|3UN8|J Chain J, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792298|pdb|3UN8|X Chain X, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980825|pdb|3SDI|J Chain J, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980839|pdb|3SDI|X Chain X, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980853|pdb|3SDK|J Chain J, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980867|pdb|3SDK|X Chain X, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550741|pdb|4GK7|J Chain J, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550755|pdb|4GK7|X Chain X, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|403071957|pdb|4B4T|4 Chain 4, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|403072201|pdb|4G4S|K Chain K, Structure Of Proteasome-Pba1-Pba2 Complex
gi|409973869|pdb|4FZC|J Chain J, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973883|pdb|4FZC|X Chain X, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973897|pdb|4FZG|J Chain J, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973911|pdb|4FZG|X Chain X, 20s Yeast Proteasome In Complex With Glidobactin
gi|444302348|pdb|4INR|J Chain J, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302362|pdb|4INR|X Chain X, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302376|pdb|4INT|J Chain J, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302390|pdb|4INT|X Chain X, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302404|pdb|4INU|J Chain J, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302418|pdb|4INU|X Chain X, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|311329|emb|CAA40149.1| proteinase yscE subunit 11 [Saccharomyces cerevisiae]
gi|603604|gb|AAB64545.1| Pre1p: 22.6 kDa subunit of proteinase yscE [Saccharomyces
cerevisiae]
gi|45269505|gb|AAS56133.1| YER012W [Saccharomyces cerevisiae]
gi|190405573|gb|EDV08840.1| 22.6 kDa proteasome subunit [Saccharomyces cerevisiae RM11-1a]
gi|207346028|gb|EDZ72648.1| YER012Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273753|gb|EEU08678.1| Pre1p [Saccharomyces cerevisiae JAY291]
gi|259145918|emb|CAY79178.1| Pre1p [Saccharomyces cerevisiae EC1118]
gi|285811635|tpg|DAA07663.1| TPA: proteasome core particle subunit beta 4 [Saccharomyces
cerevisiae S288c]
gi|323309365|gb|EGA62582.1| Pre1p [Saccharomyces cerevisiae FostersO]
gi|323333907|gb|EGA75296.1| Pre1p [Saccharomyces cerevisiae AWRI796]
gi|323337919|gb|EGA79158.1| Pre1p [Saccharomyces cerevisiae Vin13]
gi|323348955|gb|EGA83191.1| Pre1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355420|gb|EGA87244.1| Pre1p [Saccharomyces cerevisiae VL3]
gi|349577668|dbj|GAA22836.1| K7_Pre1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766037|gb|EHN07538.1| Pre1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299958|gb|EIW11050.1| Pre1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 198
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 97/155 (62%), Gaps = 17/155 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ G++GDTVQFAE+I NIQLY +R YELSP+A + + R++LA+ +RSR PY N+L
Sbjct: 44 MSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D ++ P+L+ IDYL + +E+PY HGY G T S++ ++R
Sbjct: 104 IGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAK 138
E++KR+ ++ V +V KDGI+ + +A+
Sbjct: 164 CVQELEKRMPMDFKGVIVKIVDKDGIRQVDDFQAQ 198
>gi|151944720|gb|EDN62979.1| 22.6 kDa proteasome subunit [Saccharomyces cerevisiae YJM789]
Length = 198
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 97/155 (62%), Gaps = 17/155 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ G++GDTVQFAE+I NIQLY +R YELSP+A + + R++LA+ +RSR PY N+L
Sbjct: 44 MSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D ++ P+L+ IDYL + +E+PY HGY G T S++ ++R
Sbjct: 104 IGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLNLLKL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAK 138
E++KR+ ++ V +V KDGI+ + +A+
Sbjct: 164 CVQELEKRMPMDFKGVIVKIVDKDGIRQVDDFQAQ 198
>gi|195161388|ref|XP_002021550.1| GL26572 [Drosophila persimilis]
gi|198472575|ref|XP_002133075.1| GA28985 [Drosophila pseudoobscura pseudoobscura]
gi|194103350|gb|EDW25393.1| GL26572 [Drosophila persimilis]
gi|198139073|gb|EDY70477.1| GA28985 [Drosophila pseudoobscura pseudoobscura]
Length = 210
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 89/151 (58%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A GD GDT+QF +FI+KN+ LYK+ NGY LSPRA A++TRK LA+Y+R+ + Y ML
Sbjct: 46 IATVGDGGDTLQFTDFISKNLHLYKIANGYHLSPRATAHFTRKNLADYIRTNTRYQVAML 105
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L +ID + I + HG+ I SI+ +
Sbjct: 106 LAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSIFCGSILQRFWDQKLSQDQAVSILKKC 165
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
+E+QKRLIIN N+ V +V G++ L I
Sbjct: 166 VAEIQKRLIINQRNWDVFVVDGSGMRQLESI 196
>gi|353234793|emb|CCA66814.1| probable multicatalytic endopeptidase complex chain PRE1
[Piriformospora indica DSM 11827]
Length = 178
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 94/133 (70%), Gaps = 5/133 (3%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTVQFAE++ +N++L +MRN + L P+AAA + R+ +A+ LRSRSPY N+L
Sbjct: 44 MAYSGEPGDTVQFAEYVERNLRLQQMRNNHPLRPQAAASWVRRSIADSLRSRSPYAVNIL 103
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVPNF 119
+ G+D + +L+++DYL + +++P+ HGY LS++ EVQKRL+I+ P+F
Sbjct: 104 LGGYDMANKQAKLYWMDYLGTQVDVPFAAHGYGSYFALSLLDR----EVQKRLVISFPSF 159
Query: 120 KVTMVSKDGIKHL 132
KV +V + G++ +
Sbjct: 160 KVKVVDEGGVREV 172
>gi|384485141|gb|EIE77321.1| hypothetical protein RO3G_02025 [Rhizopus delemar RA 99-880]
Length = 194
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 92/143 (64%), Gaps = 17/143 (11%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G+ GDTV FAE+I +NI+LY +RNG ELSP+A A +TR++LA+ LRSR PY+ N+++ G
Sbjct: 47 SGEPGDTVNFAEYIQRNIKLYGIRNGIELSPKATATFTRRELADSLRSRHPYSVNLIVGG 106
Query: 64 HD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----------------S 106
+D ++ +L++IDYL ++ +P+ GY S+M +++
Sbjct: 107 YDVKKQKSELYWIDYLGAMASLPFCAQGYGAYFCTSLMDRHYKEDMSVDEAKTLMKMCIQ 166
Query: 107 EVQKRLIINVPNFKVTMVSKDGI 129
E++ R I+N+PNFK T + KDG+
Sbjct: 167 ELKTRFIVNLPNFKTTFIDKDGV 189
>gi|323305210|gb|EGA58957.1| Pre1p [Saccharomyces cerevisiae FostersB]
Length = 155
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 97/155 (62%), Gaps = 17/155 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ G++GDTVQFAE+I NIQLY +R YELSP+A + + R++LA+ +RSR PY N+L
Sbjct: 1 MSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVL 60
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D ++ P+L+ IDYL + +E+PY HGY G T S++ ++R
Sbjct: 61 IGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKL 120
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAK 138
E++KR+ ++ V +V KDGI+ + +A+
Sbjct: 121 CVQELEKRMPMDFKGVIVKIVDKDGIRQVDDFQAQ 155
>gi|367024525|ref|XP_003661547.1| hypothetical protein MYCTH_2301064 [Myceliophthora thermophila ATCC
42464]
gi|347008815|gb|AEO56302.1| hypothetical protein MYCTH_2301064 [Myceliophthora thermophila ATCC
42464]
Length = 203
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 91/150 (60%), Gaps = 17/150 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N QLY MRN +LSP A A++ R +LA LRSR PY+ N+L
Sbjct: 44 MAFSGEAGDTVQFAEYIQANAQLYSMRNDTDLSPSALAHFVRGELASSLRSRKPYSVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L+++DYLASL +PY HGY LS++ ++H
Sbjct: 104 LGGVDPITHKPSLYWLDYLASLAPVPYAAHGYAQYYCLSLLDKHHHPDISLDRGLELLRL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+++RL I+ V +V+KDGI+ P
Sbjct: 164 CADELKRRLPIDFKGLIVKVVTKDGIEEKP 193
>gi|403163180|ref|XP_003890266.1| 20S proteasome subunit beta 4 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375163947|gb|EHS62553.1| 20S proteasome subunit beta 4 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 194
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 89/149 (59%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTVQFAE++ +N++LY +RN +L P AA +TR QLA LRSR+ Y+ N+L
Sbjct: 44 MAYSGEPGDTVQFAEYVERNLRLYGIRNHVDLLPHEAASWTRNQLASSLRSRNAYSVNLL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D E P L++IDYL ++ ++PY HGY LS M +HR
Sbjct: 104 LGGFDTAEAVPLLYWIDYLGTMAQVPYAAHGYGAYFCLSTMDRFHRPDMDLQQGLELLKR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+ R I+N+ FKV + KDG++ +
Sbjct: 164 CIDELSTRFIVNLGTFKVRVADKDGVREV 192
>gi|392870119|gb|EAS27280.2| proteasome component Pre1 [Coccidioides immitis RS]
Length = 205
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 91/149 (61%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G++GDTVQFAE+I N QLY MRN ELSP A A + R +LA LRSRSPY N+L
Sbjct: 44 IAYSGEAGDTVQFAEYIQANAQLYSMRNETELSPSAVANFVRGELARSLRSRSPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP + P L+++DYLASL ++PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITQKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISYEEGLKLLEK 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +V+KDGI +
Sbjct: 164 CTDELKRRLPIDFKGVFVKVVTKDGINEV 192
>gi|195470823|ref|XP_002087706.1| GE18168 [Drosophila yakuba]
gi|194173807|gb|EDW87418.1| GE18168 [Drosophila yakuba]
Length = 210
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 95/160 (59%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA GD GDT+QF +FI+KN+ LYK+ +GY LS ++AA++TRK LA+Y+R+ + Y ML
Sbjct: 46 MATVGDGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAML 105
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D EGP L +ID + I + HG+ + SI+ Y S
Sbjct: 106 LAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSRLSQADAYSLMKKC 165
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+Q+RLIIN NF+V +V G++ + I ++ +E+
Sbjct: 166 VLEIQRRLIINQRNFEVYVVDSKGMRKMEAINPGSLNKES 205
>gi|195342043|ref|XP_002037611.1| GM18354 [Drosophila sechellia]
gi|195576099|ref|XP_002077914.1| GD23168 [Drosophila simulans]
gi|194132461|gb|EDW54029.1| GM18354 [Drosophila sechellia]
gi|194189923|gb|EDX03499.1| GD23168 [Drosophila simulans]
Length = 210
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 95/160 (59%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA GD GDT+QF +FI+KN+ LYK+ +GY LS ++AA++TRK LA+Y+R+ + Y ML
Sbjct: 46 MATVGDGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAML 105
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D EGP L +ID + I + HG+ + SI+ Y S
Sbjct: 106 LAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKC 165
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+Q+RLIIN NF+V +V G++ + I ++ +E+
Sbjct: 166 VLEIQRRLIINQRNFEVYVVDSKGMRKMEAINPGSLNKES 205
>gi|358392271|gb|EHK41675.1| hypothetical protein TRIATDRAFT_302124 [Trichoderma atroviride IMI
206040]
Length = 203
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 90/146 (61%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G++GDTVQFAE+I +N QLY MRN ELSP A A++ R +LA LRSR+PYN N+L
Sbjct: 44 LAFSGEAGDTVQFAEYIQRNAQLYSMRNETELSPSALAHFVRGELATSLRSRNPYNVNLL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP G P L+++DYLA+L E+PY HGY LS++ ++H
Sbjct: 104 MGGVDPITGKPSLYWLDYLAALAEVPYAAHGYAQYYCLSLLDKHHHPDITLGQGIKLMTM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V + DGI
Sbjct: 164 CIDELKRRLPIDFKGMVVKAIKADGI 189
>gi|195117644|ref|XP_002003357.1| GI17870 [Drosophila mojavensis]
gi|193913932|gb|EDW12799.1| GI17870 [Drosophila mojavensis]
Length = 221
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 91/151 (60%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A GD GDT+QF ++IAK+++LY + NGY LSPR AA++TRK LA+Y+R+ + Y +ML
Sbjct: 44 LAAIGDGGDTLQFTDYIAKHLKLYNISNGYHLSPRGAAHFTRKNLADYIRTNTRYQVSML 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L FID + + I + HG + SI Y
Sbjct: 104 LAGYDSVEGPDLHFIDSYGAAMPINHAGHGLGSLFCGSIFQRYWTHELKQKQAYNILRMC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
+E+QKRL+IN+ NF V +V+++G L I
Sbjct: 164 VAEIQKRLVINLRNFDVFVVNRNGTSQLESI 194
>gi|45550918|ref|NP_722823.2| proteasome beta4R2 subunit, isoform A [Drosophila melanogaster]
gi|442625512|ref|NP_001259950.1| proteasome beta4R2 subunit, isoform B [Drosophila melanogaster]
gi|33302636|sp|Q9VQE5.3|PSB2_DROME RecName: Full=Probable proteasome subunit beta type-2
gi|21428846|gb|AAM50142.1| GH07971p [Drosophila melanogaster]
gi|45444964|gb|AAF51229.3| proteasome beta4R2 subunit, isoform A [Drosophila melanogaster]
gi|220944152|gb|ACL84619.1| CG17302-PA [synthetic construct]
gi|220953956|gb|ACL89521.1| CG17302-PA [synthetic construct]
gi|440213217|gb|AGB92487.1| proteasome beta4R2 subunit, isoform B [Drosophila melanogaster]
Length = 210
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 95/160 (59%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA GD GDT+QF +FI+KN+ LYK+ +GY LS ++AA++TRK LA+Y+R+ + Y ML
Sbjct: 46 MATVGDGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAML 105
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D EGP L +ID + I + HG+ + SI+ Y S
Sbjct: 106 LAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKC 165
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+Q+RLIIN NF+V +V G++ + I ++ +E+
Sbjct: 166 VLEIQRRLIINQRNFEVYVVDSKGMRKMEAINPGSLNKES 205
>gi|365987183|ref|XP_003670423.1| hypothetical protein NDAI_0E03630 [Naumovozyma dairenensis CBS 421]
gi|343769193|emb|CCD25180.1| hypothetical protein NDAI_0E03630 [Naumovozyma dairenensis CBS 421]
Length = 195
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 93/149 (62%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ +G++GDTVQFAE+I NIQLY MR YELSP A + + R++LA+ +RSR PY N+L
Sbjct: 44 MSFSGEAGDTVQFAEYIQANIQLYAMREDYELSPHAVSSFVRQELAKSIRSRRPYQANVL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G D ++ P L+ IDYL + +E+PY HGY G T S++ ++R
Sbjct: 104 IGGFDTKKDTPGLYQIDYLGTKVELPYAAHGYSGFYTFSLLDRHYRPDMTTEEGLKLLKL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
+E++KR+ ++ V +V KDGI+ +
Sbjct: 164 CITELEKRMPVDFKGVFVKVVDKDGIRQV 192
>gi|384483737|gb|EIE75917.1| hypothetical protein RO3G_00621 [Rhizopus delemar RA 99-880]
Length = 167
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 92/142 (64%), Gaps = 17/142 (11%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G+ GDTV FAE+I +NI+LY +RNG ELSP+A A +TR++LA+ LRSR PY+ N+++ G
Sbjct: 20 SGEPGDTVNFAEYIQRNIKLYGIRNGIELSPKATATFTRRELADSLRSRHPYSVNLIVGG 79
Query: 64 HD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----------------S 106
+D ++ +L++IDYL ++ +P+ GY S+M +++
Sbjct: 80 YDVKKQKSELYWIDYLGAMASLPFCAQGYGAYFCTSLMDRHYKEDMSVDEAKTLMKMCIQ 139
Query: 107 EVQKRLIINVPNFKVTMVSKDG 128
E++ R I+N+PNFK T++ KDG
Sbjct: 140 ELKTRFIVNLPNFKTTLIDKDG 161
>gi|358366047|dbj|GAA82668.1| proteasome component C11 [Aspergillus kawachii IFO 4308]
Length = 182
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 90/150 (60%), Gaps = 17/150 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I NIQLY MRN EL P A A + R ++A LRSR+PY N+L
Sbjct: 23 MAFSGEAGDTVQFAEYIQANIQLYTMRNDTELGPNAVASFVRGEMARSLRSRNPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L++IDYLASL +PY HGY LS + ++H
Sbjct: 83 LGGVDPITHKPHLYWIDYLASLAPVPYAAHGYAQYYCLSTLDKHHHPDISLEEGMKLLEM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+++RL I+ V +V+KDG++ +P
Sbjct: 143 CTDELKRRLPIDYKGVLVKIVTKDGVQEVP 172
>gi|119175368|ref|XP_001239925.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 787
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 90/146 (61%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G++GDTVQFAE+I N QLY MRN ELSP A A + R +LA LRSRSPY N+L
Sbjct: 23 IAYSGEAGDTVQFAEYIQANAQLYSMRNETELSPSAVANFVRGELARSLRSRSPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP + P L+++DYLASL ++PY HGY LSI+ ++H
Sbjct: 83 LGGVDPITQKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISYEEGLKLLEK 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V +V+KDGI
Sbjct: 143 CTDELKRRLPIDFKGVFVKVVTKDGI 168
>gi|302662696|ref|XP_003022999.1| hypothetical protein TRV_02820 [Trichophyton verrucosum HKI 0517]
gi|291186975|gb|EFE42381.1| hypothetical protein TRV_02820 [Trichophyton verrucosum HKI 0517]
Length = 178
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 86/141 (60%), Gaps = 6/141 (4%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAEFI N QLY MRN EL P A A++ R +LA LRSRSPY N+L
Sbjct: 23 MAFSGEAGDTVQFAEFIQANTQLYSMRNQTELGPSAVAHFVRGELARSLRSRSPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVPNF 119
+ G DP E P L+++DYLASL ++PY HGY LSI+ ++H ++
Sbjct: 83 LGGVDPITEKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISFE-----QGL 137
Query: 120 KVTMVSKDGIKHLPPIKAKNI 140
K+ + D +K PI K +
Sbjct: 138 KLLEMCSDELKRRLPIDFKGV 158
>gi|392590513|gb|EIW79842.1| 20S proteasome subunit [Coniophora puteana RWD-64-598 SS2]
Length = 194
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 92/149 (61%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDT+QFAE++ +NI+LY++RN Y L P AAA + R+ LA+ LRSRSPY N+L
Sbjct: 44 MAYSGEPGDTLQFAEYVERNIRLYQIRNLYPLRPAAAASWIRRTLADSLRSRSPYQVNLL 103
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D P L +IDYL + +E+P+ HGY LS++ YH
Sbjct: 104 VGGYDEATHSPSLHWIDYLGTSVEVPFGAHGYGSYFALSLLDRYHNPEASLEEGLDTLRR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
+EV KRL+++ +KV +V KDG + +
Sbjct: 164 CINEVSKRLVVSPGKYKVKVVDKDGTREV 192
>gi|340522873|gb|EGR53106.1| 20S proteasome beta-type subunit [Trichoderma reesei QM6a]
Length = 201
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G++GDTVQFAE+I +N QLY MRN ELSP A++ R +LA LRSR+PYN N+L
Sbjct: 42 LAFSGEAGDTVQFAEYIQRNAQLYSMRNETELSPSGLAHFVRGELATSLRSRNPYNVNLL 101
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP G P L+++DYLASL E+PY HGY LS++ ++H
Sbjct: 102 MGGVDPITGKPSLYWLDYLASLAEVPYAAHGYAQYYCLSLLDKHHHPDITLGQGIKLMTM 161
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V + DGI
Sbjct: 162 CIDELKRRLPIDFKGMVVKAIKADGI 187
>gi|320590812|gb|EFX03255.1| proteasome component [Grosmannia clavigera kw1407]
Length = 208
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GDTVQFAE+I NIQLY MRN ELSP A A++ R +LA LRSR PY N+L
Sbjct: 44 LAFSGEPGDTVQFAEYIQANIQLYTMRNAAELSPSAVAHFVRGELASSLRSRKPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L++IDYLASL +PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITHKPSLYWIDYLASLAPVPYAAHGYAQYYCLSILDKHHHPDITLDQGIKLLSM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++R+ I+ V +V+KDG+
Sbjct: 164 CTDELKRRMPIDFKGMIVKVVTKDGV 189
>gi|451848864|gb|EMD62169.1| hypothetical protein COCSADRAFT_201667 [Cochliobolus sativus
ND90Pr]
gi|451998687|gb|EMD91151.1| hypothetical protein COCHEDRAFT_1021842 [Cochliobolus
heterostrophus C5]
Length = 203
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 89/149 (59%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAEFI N+QLY MRN ELSP A A + R +LA LRSR PY N+L
Sbjct: 44 MAFSGEAGDTVQFAEFIQANVQLYSMRNNMELSPAATANFVRGELASALRSRKPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D + P L++IDYLAS +PY HGY LS++ ++H
Sbjct: 104 LGGYDTIADKPTLYWIDYLASQAALPYAAHGYAQYYCLSLLDKHHHPDIDYEQGLKIMRM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL ++ V ++KDGIK +
Sbjct: 164 CTEELKRRLPVDFKGVMVKAITKDGIKDV 192
>gi|401626068|gb|EJS44033.1| pre1p [Saccharomyces arboricola H-6]
Length = 198
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 95/155 (61%), Gaps = 17/155 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ G++GDT QFAE+I NIQLY +R YELSP+A + + R++LA+ +RSR PY N+L
Sbjct: 44 MSFAGEAGDTTQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRKPYQVNVL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D ++ P+L+ IDYL + +E+PY HGY G T SI+ ++R
Sbjct: 104 IGGYDKRKDKPELYQIDYLGTQVELPYGAHGYSGFYTFSILDRHYRPDMTTEEGLSLLKI 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAK 138
E+++R+ ++ V +V KDGI+ + + K
Sbjct: 164 CVQELERRMPMDFKGVIVKIVDKDGIRQVDDFQTK 198
>gi|302501612|ref|XP_003012798.1| hypothetical protein ARB_01049 [Arthroderma benhamiae CBS 112371]
gi|291176358|gb|EFE32158.1| hypothetical protein ARB_01049 [Arthroderma benhamiae CBS 112371]
Length = 178
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 86/141 (60%), Gaps = 6/141 (4%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAEFI N QLY MRN EL P A A++ R +LA LRSRSPY N+L
Sbjct: 23 MAFSGEAGDTVQFAEFIQANTQLYSMRNQTELGPSAVAHFVRGELARSLRSRSPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVPNF 119
+ G DP E P L+++DYLASL ++PY HGY LSI+ ++H ++
Sbjct: 83 LGGVDPITEKPSLYWLDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDISFE-----QGL 137
Query: 120 KVTMVSKDGIKHLPPIKAKNI 140
K+ + D +K PI K +
Sbjct: 138 KLLEMCSDELKRRLPIDFKGV 158
>gi|256084821|ref|XP_002578624.1| proteasome subunit beta 2 (T01 family) [Schistosoma mansoni]
gi|360045144|emb|CCD82692.1| proteasome subunit beta 2 (T01 family) [Schistosoma mansoni]
Length = 142
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 85/133 (63%), Gaps = 16/133 (12%)
Query: 26 MRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFFIDYLASLIEIP 85
+ GYEL+P AAA +TR +AE LRSRSPY N+LIAG D + GP+L+++DYLASLI++P
Sbjct: 10 LLQGYELTPSAAANFTRNNMAESLRSRSPYFVNLLIAGFDLQTGPELYYLDYLASLIKVP 69
Query: 86 YITHGYPGIVTLSIMGEYHR----------------SEVQKRLIINVPNFKVTMVSKDGI 129
+ HGY +V LSI+ HR EVQKRL+IN+ + V +V+KDGI
Sbjct: 70 FAVHGYGALVALSILDRMHRPDMTVNEAVALLRLCIQEVQKRLVINLDRYMVRIVTKDGI 129
Query: 130 KHLPPIKAKNIPE 142
+ LP + + E
Sbjct: 130 EELPDLTDFAVKE 142
>gi|358389631|gb|EHK27223.1| hypothetical protein TRIVIDRAFT_73156 [Trichoderma virens Gv29-8]
Length = 203
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G++GDTVQFAE+I +N QLY MRN ELSP A++ R +LA LRSR+PYN N+L
Sbjct: 44 LAFSGEAGDTVQFAEYIQRNAQLYSMRNETELSPSGLAHFVRGELATSLRSRNPYNVNLL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP G P L+++DYLASL E+PY HGY LS++ ++H
Sbjct: 104 MGGVDPITGKPSLYWLDYLASLAEVPYAAHGYAQYYCLSLLDKHHHPDITLGQGIKLMTM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V + DGI
Sbjct: 164 CIDELKRRLPIDFKGMVVKAIKADGI 189
>gi|343425240|emb|CBQ68776.1| probable multicatalytic endopeptidase complex chain PRE1
[Sporisorium reilianum SRZ2]
Length = 194
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GDT+QF+E+I +N +LY +RN EL P++AA + RKQLAE LRSR+PY N+L
Sbjct: 44 MTYSGEPGDTLQFSEWIERNSKLYSIRNHVELRPKSAASWIRKQLAESLRSRNPYQVNLL 103
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D P P L++IDYL +L +P+ HGY +S + YHR
Sbjct: 104 LGGFDLPSSEPALYWIDYLGTLATVPFAAHGYGAFFAMSTLDRYHRPDMSLEEGLDLLRK 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
+E+++R I+++ F V +V +DG +
Sbjct: 164 CINELKQRFIVDLGTFTVRVVDRDGAR 190
>gi|401838998|gb|EJT42383.1| PRE1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 198
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 94/155 (60%), Gaps = 17/155 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ G++GDTVQFAE+I NIQLY +R YELSP+A + + RK+LA+ +RSR PY N+L
Sbjct: 44 MSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRKELAKSIRSRRPYQVNVL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D P+L+ IDYL + +E+PY HGY G T S++ ++R
Sbjct: 104 IGGYDKRRNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDRHYRPDMTTEEGLNLLKL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAK 138
E++KR+ ++ V +V KDG++ + + +
Sbjct: 164 CVQELEKRMPMDFKGVIVKIVDKDGVRQVDDFQTQ 198
>gi|367017710|ref|XP_003683353.1| hypothetical protein TDEL_0H02830 [Torulaspora delbrueckii]
gi|359751017|emb|CCE94142.1| hypothetical protein TDEL_0H02830 [Torulaspora delbrueckii]
Length = 196
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 94/153 (61%), Gaps = 17/153 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ +G++GDTVQFAE+I N+QLY +R ELSP A A + R++LA+ LRSR PY N+L
Sbjct: 44 MSFSGEAGDTVQFAEYIQANMQLYSVRENVELSPHATASFVRQELAKSLRSRKPYQVNVL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D + G P+L+ IDYL + +E+PY HGY G T S++ ++R
Sbjct: 104 IGGYDSKAGKPELYQIDYLGTNVELPYAAHGYAGFYTFSLLDRHYRPDMTEQEGLELLKK 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIK 136
E+ +R+ I+ V +V KDG++ L ++
Sbjct: 164 CVEELNRRMPIDFKGVIVKVVDKDGVRRLDDME 196
>gi|259482727|tpe|CBF77481.1| TPA: 20S proteasome beta-type subunit (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 203
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G++GDTVQFAE++ N+QLY MRN ELSP A A + R +LA LRSR+PY N+L
Sbjct: 44 VAFSGEAGDTVQFAEYVQANVQLYTMRNDTELSPNAVANFVRGELARSLRSRNPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP + P L++IDYLASL +PY HGY LS + ++H
Sbjct: 104 LGGVDPISQKPHLYWIDYLASLASVPYAAHGYAQYYCLSTLDKHHHPDITLEQGMKLLEM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
E+++RL I+ V +V+KDG++
Sbjct: 164 CTDELKRRLPIDYKGVLVKVVTKDGVR 190
>gi|378725544|gb|EHY52003.1| proteasome subunit beta type-2 [Exophiala dermatitidis NIH/UT8656]
Length = 203
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 91/157 (57%), Gaps = 17/157 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G++GDT+QFAEFI NI LY MRN +L P A A + R +LA LRSR PYN N+L
Sbjct: 44 LAFSGEAGDTIQFAEFIQANIALYTMRNETDLGPSAVASFIRSELARSLRSRKPYNVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP + P L+++DYLAS ++PY HGY LSI+ ++H
Sbjct: 104 LGGMDPITKQPSLYWLDYLASSAKVPYAAHGYAQYYCLSILDKHHHPDISFEQGMKILRM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
E+Q+RL I+ V ++ KDGI L +K +
Sbjct: 164 CTDELQRRLPIDFKGMTVKVIKKDGIVDLEYDTSKQV 200
>gi|452980299|gb|EME80060.1| hypothetical protein MYCFIDRAFT_56567 [Pseudocercospora fijiensis
CIRAD86]
Length = 203
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 17/157 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDT+QFAE++ N+ LY MRNG +L+P + + R +LA+ LRSRSPY N+L
Sbjct: 44 MAFSGEAGDTIQFAEYVQANVALYSMRNGSDLTPTETSSFVRSELAKSLRSRSPYTVNLL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D PQLF+IDYLAS +PY HGY LS + ++H
Sbjct: 104 LGGYDVHANKPQLFWIDYLASCAPVPYAAHGYAQYYCLSTLDKHHHPDITFEQGMKILRM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
E+Q+RL I+ V +V KDGI+ + +K +
Sbjct: 164 CTDELQRRLPIDFKGVLVKVVDKDGIREVEYDTSKQV 200
>gi|367037387|ref|XP_003649074.1| hypothetical protein THITE_2107253 [Thielavia terrestris NRRL 8126]
gi|346996335|gb|AEO62738.1| hypothetical protein THITE_2107253 [Thielavia terrestris NRRL 8126]
Length = 203
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N QLY MRN +LSP A A++ R +LA LRSR PYN N+L
Sbjct: 44 MAFSGEAGDTVQFAEYIQANAQLYSMRNETDLSPSALAHFVRGELASSLRSRKPYNVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L+++DYLA+L +PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITHKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLVQGMKILTL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V V+KDGI
Sbjct: 164 CTDELKRRLPIDFKGMVVKAVTKDGI 189
>gi|169773719|ref|XP_001821328.1| proteasome subunit beta type-2 [Aspergillus oryzae RIB40]
gi|238491732|ref|XP_002377103.1| proteasome component Pre1, putative [Aspergillus flavus NRRL3357]
gi|83769189|dbj|BAE59326.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697516|gb|EED53857.1| proteasome component Pre1, putative [Aspergillus flavus NRRL3357]
Length = 203
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 90/149 (60%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I NIQLY MRN EL P A A + R +LA LRSRSPY N+L
Sbjct: 44 MAFSGEAGDTVQFAEYIQANIQLYTMRNDTELGPNAVANFVRGELARSLRSRSPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+AG D + P L++IDYLASL +PY HGY LS + ++H
Sbjct: 104 LAGVDGITQKPHLYWIDYLASLAPVPYAAHGYAQYYCLSTLDKHHHPDISLEEGLKLLEM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +V+KDG++ +
Sbjct: 164 CTDELKRRLPIDYKGVLVKVVTKDGVREV 192
>gi|393215279|gb|EJD00770.1| 20S proteasome subunit [Fomitiporia mediterranea MF3/22]
Length = 205
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 94/160 (58%), Gaps = 28/160 (17%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GDTV FAE+I +N++L+++R+ +EL P +AA + R+ LA+ LRSRSPY N+L
Sbjct: 44 MTYSGEPGDTVHFAEYIERNLRLHQIRHHHELRPSSAAAWIRRALADSLRSRSPYAVNLL 103
Query: 61 IAGHDP-----EEG-------PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--- 105
+ G D EEG P L++IDYL +L E+P+ HGY LS++ YH
Sbjct: 104 VGGFDTSAAAIEEGKEELGGTPNLYWIDYLGTLAEVPFAAHGYGSYFVLSLLDRYHNPDA 163
Query: 106 -------------SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV KRLI V N+KV +V KDG++ +
Sbjct: 164 TLEEGLATLKRCIDEVAKRLIDGVSNYKVKVVDKDGVREV 203
>gi|358059834|dbj|GAA94397.1| hypothetical protein E5Q_01048 [Mixia osmundae IAM 14324]
Length = 656
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 17/148 (11%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
A +G+SGDTVQFAE++ N++L +RN EL P A+A + RK LA+ LRSR PY N+L+
Sbjct: 483 AYSGESGDTVQFAEYVEANLKLNAIRNHTELRPAASAAWIRKTLADSLRSRKPYQVNLLL 542
Query: 62 AGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
G DP + P L++IDYL + +PY HGY LS M YH
Sbjct: 543 GGFDPTDSTPHLYWIDYLGTKATVPYAAHGYGSYFCLSTMDRYHNPNCSLEEGLALLARC 602
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHL 132
+E++ R I+N+ F+V +V KDG++ +
Sbjct: 603 INELETRFIVNLGKFQVRVVDKDGVREV 630
>gi|406863085|gb|EKD16133.1| proteasome component Pre1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 217
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDT+QFAE+I N QLY MRN L+P A A++ R +LA LRSR PYN N+L
Sbjct: 58 MAFSGEAGDTIQFAEYIQANAQLYSMRNSTSLTPTALAHFVRGELASSLRSRKPYNVNLL 117
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L+++DYLASL +PY HGY LSI+ ++H
Sbjct: 118 LGGVDPLTNRPSLYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDIGYEEGIKLLRL 177
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +V+KDG++ +
Sbjct: 178 CTDELKRRLPIDFKGMMVKVVTKDGVREV 206
>gi|302911258|ref|XP_003050453.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731390|gb|EEU44740.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 203
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 88/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G++GDTVQFAE+I +N QLY MRN +LSP A++ R +LA LRSR PYN N+L
Sbjct: 44 LAFSGEAGDTVQFAEYIQRNAQLYSMRNESDLSPSGLAHFVRGELATSLRSRKPYNVNLL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP G P L+++DYLASL ++PY HGY LSI+ ++H
Sbjct: 104 MGGVDPITGKPSLYWLDYLASLADVPYAAHGYAQYYCLSILDKHHHPDITLGQGIKILTM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V V DGI
Sbjct: 164 CTDELKRRLPIDFKGMVVKAVKADGI 189
>gi|363748210|ref|XP_003644323.1| hypothetical protein Ecym_1264 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887955|gb|AET37506.1| hypothetical protein Ecym_1264 [Eremothecium cymbalariae
DBVPG#7215]
Length = 195
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 94/149 (63%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ TG+SGDTVQF+E+I N+QLY +R YELSP+A + + R +LA+ LRSR P+ N+L
Sbjct: 44 ISFTGESGDTVQFSEYIQANMQLYMIRENYELSPQAQSSFVRNELAKSLRSRKPFQVNVL 103
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D +E P+L+ IDYL + +E+PY HGY G T S++ ++R
Sbjct: 104 IGGYDVKKEKPELYQIDYLGTKVELPYAAHGYSGFYTFSLLDHHYRPDMSTEEGLKLLKL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++R+ I+ V +V KDGI+ +
Sbjct: 164 CVEELERRMPIDFKGVLVKVVDKDGIREI 192
>gi|328860067|gb|EGG09174.1| hypothetical protein MELLADRAFT_52069 [Melampsora larici-populina
98AG31]
Length = 194
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 87/149 (58%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTVQFAE++ +N++LY +RN EL P AA +TR QLA LRSR PY+ NML
Sbjct: 44 MAYSGEPGDTVQFAEYVERNLRLYGIRNHVELLPHEAASWTRNQLATSLRSRKPYSVNML 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D P L++IDYL ++ E+PY HGY LS M +H
Sbjct: 104 LGGYDTARSVPMLYWIDYLGTMAEVPYAAHGYGAYFCLSTMDRFHSPDMNLEEGLALLKR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+ R I N+ FK+ + K+G++ +
Sbjct: 164 CIDELNTRFIANLGTFKIRVADKEGVREV 192
>gi|391869206|gb|EIT78408.1| 20S proteasome, regulatory subunit beta type PSMB2/PRE1
[Aspergillus oryzae 3.042]
Length = 203
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 89/149 (59%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I NIQLY MRN EL P A A + R +LA LRSRSPY N+L
Sbjct: 44 MAFSGEAGDTVQFAEYIQANIQLYTMRNDTELGPNAVANFVRGELARSLRSRSPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+AG D + P L++IDYLASL +PY HGY LS + +H
Sbjct: 104 LAGVDGITQKPHLYWIDYLASLAPVPYAAHGYAQYYCLSTLDNHHHPDISLEEGLKLLEM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +V+KDG++ +
Sbjct: 164 CTDELKRRLPIDYKGVLVKVVTKDGVREV 192
>gi|340904823|gb|EGS17191.1| hypothetical protein CTHT_0065060 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 256
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 91/150 (60%), Gaps = 17/150 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G++GDTVQFAE+I N QLY MRN +LSP A A++ R +LA LRSR PY+ N+L
Sbjct: 23 LAFSGEAGDTVQFAEYIQANSQLYSMRNETDLSPAALAHFVRGELASSLRSRHPYSVNLL 82
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP G P L++IDYLASL +PY HGY LS++ ++H
Sbjct: 83 LGGVDPISGKPSLYWIDYLASLAPVPYAAHGYAQYYCLSLLDKHHHPDIDLDQGRKLLDM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+++RL I+ V V+K+GI LP
Sbjct: 143 CADELKRRLPIDFKGLVVKAVTKNGIVDLP 172
>gi|449295235|gb|EMC91257.1| hypothetical protein BAUCODRAFT_117595 [Baudoinia compniacensis
UAMH 10762]
Length = 203
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 91/150 (60%), Gaps = 17/150 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTVQFAE+I NIQLY MRN +LSP + + R +LA+ LRSRSPY N+L
Sbjct: 44 MAFSGEPGDTVQFAEYIQANIQLYSMRNSSDLSPFEVSSFVRAELAKSLRSRSPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D ++ P+L++IDYLAS +PY HGY LSI+ ++H
Sbjct: 104 LGGYDSIKQKPELYWIDYLASSAPVPYAAHGYAQYYCLSILDKHHHPDISFEQGMKILRM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+++RL I+ V ++ KDGI+ P
Sbjct: 164 CTDELKRRLPIDFKGVNVKIIDKDGIREEP 193
>gi|322703780|gb|EFY95384.1| proteasome component C11 [Metarhizium anisopliae ARSEF 23]
Length = 182
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 88/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I +N QLY MRN +LSP A++ R +LA LRSR PYN N+L
Sbjct: 23 MAFSGEAGDTVQFAEYIQRNAQLYSMRNETDLSPSGLAHFVRGELATSLRSRHPYNVNLL 82
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G +P G P L+++DYLASL E+PY HGY LSI+ ++H
Sbjct: 83 MGGVNPITGKPHLYWLDYLASLAEVPYAAHGYAQYYCLSILDKHHHPDITLGQGIKLLTM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V + DGI
Sbjct: 143 CTDELKRRLPIDFKGMVVKAIKADGI 168
>gi|322696165|gb|EFY87961.1| putative proteasome subunit beta type-2 [Metarhizium acridum CQMa
102]
Length = 182
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 88/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I +N QLY MRN +LSP A++ R +LA LRSR PYN N+L
Sbjct: 23 MAFSGEAGDTVQFAEYIQRNAQLYSMRNETDLSPSGLAHFVRGELATSLRSRHPYNVNLL 82
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G +P G P L+++DYLASL E+PY HGY LSI+ ++H
Sbjct: 83 MGGVNPITGKPHLYWLDYLASLAEVPYAAHGYAQYYCLSILDKHHHPDITLGQGIKLLTM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V + DGI
Sbjct: 143 CTDELKRRLPIDFKGMVVKAIKTDGI 168
>gi|119501034|ref|XP_001267274.1| proteasome component Pre1, putative [Neosartorya fischeri NRRL 181]
gi|119415439|gb|EAW25377.1| proteasome component Pre1, putative [Neosartorya fischeri NRRL 181]
Length = 212
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 90/149 (60%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N+ LY MRN EL P A A + R +LA LRSR+PY N+L
Sbjct: 53 MAFSGEAGDTVQFAEYIQANVALYTMRNDTELRPNAVANFVRGELARSLRSRNPYTVNLL 112
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------- 106
+ G D E P L++IDYL++L +PY HGY LSI+ ++H S
Sbjct: 113 LGGVDSITEEPHLYWIDYLSALARVPYAAHGYAQYYCLSILDKHHHSDISLEQGMKLLQM 172
Query: 107 ---EVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +V+KDG+K +
Sbjct: 173 CTDELKRRLPIDYKGLLVKVVTKDGVKEV 201
>gi|340367981|ref|XP_003382531.1| PREDICTED: proteasome subunit beta type-2-A-like [Amphimedon
queenslandica]
Length = 218
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 100/171 (58%), Gaps = 20/171 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M V GD+GDTV F EFI KN+ Y+++NGY LSP AA YTR ++A+ LR ++P N++
Sbjct: 44 MVVCGDTGDTVYFGEFIQKNLAYYRIKNGYSLSPSAAVNYTRHEMAKRLR-QAPNLVNLI 102
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------- 106
+ G+D + L+F+DYL +L ++P+ HGY LS + YHRS
Sbjct: 103 MTGYDESTKQTSLYFMDYLGTLADVPFAAHGYGSYFALSTLDRYHRSNMSKEEAEGLLLK 162
Query: 107 ---EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAK--NIPEENKGIPETEQ 152
EVQKRL+IN+P+F V ++G+ +K + + E+ G ++E+
Sbjct: 163 CILEVQKRLVINLPSFSFYFVDENGVSSKRTVKTEPAKVVGESTGEQQSEE 213
>gi|189193565|ref|XP_001933121.1| proteasome subunit beta type-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978685|gb|EDU45311.1| proteasome subunit beta type-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 182
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 89/147 (60%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G++GDTVQFAE+I N+QLY MRN ELSP A A + R +LA+ LRSR PY N+L
Sbjct: 23 MTFSGEAGDTVQFAEYIQANVQLYSMRNNMELSPAATANFVRGELAQALRSRKPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D + P L++IDYLAS +PY HGY LS++ ++H
Sbjct: 83 LGGYDTIADKPTLYWIDYLASQASLPYAAHGYAQYYCLSLLDKHHHPDIDYEQGIKILRM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
E+++RL I+ V +++KDGIK
Sbjct: 143 CTEELKRRLPIDFKGVLVKVITKDGIK 169
>gi|45184842|ref|NP_982560.1| AAR019Wp [Ashbya gossypii ATCC 10895]
gi|44980451|gb|AAS50384.1| AAR019Wp [Ashbya gossypii ATCC 10895]
gi|374105759|gb|AEY94670.1| FAAR019Wp [Ashbya gossypii FDAG1]
Length = 195
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 91/149 (61%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ +G+ GD VQF+E+I N+QLY +R YELSP+A A Y R +LA+ LRSR P+ N+L
Sbjct: 44 MSFSGEPGDAVQFSEYIQANMQLYMIRENYELSPQAQASYVRSELAKSLRSRKPFQVNVL 103
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D E P+L+ IDYL + +E+PY HGY G T S++ ++R
Sbjct: 104 IGGYDTRAEKPELYQIDYLGTKVELPYAAHGYSGFYTFSLLDHHYRPDMTTEEGLKLLKL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+Q+R+ I+ V +V KDGI+ +
Sbjct: 164 CVEELQRRMPIDFKGVLVKVVDKDGIRDV 192
>gi|225680870|gb|EEH19154.1| proteasome component Pre1 [Paracoccidioides brasiliensis Pb03]
Length = 210
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 93/157 (59%), Gaps = 17/157 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N+QLY MRN ELSP A A + R +L+ LRSR PY N+L
Sbjct: 51 MAFSGEAGDTVQFAEYIQANVQLYSMRNETELSPSAVANFVRGELSRSLRSRRPYTVNLL 110
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P L+++DYLA+L +PY HGY LSI+ ++H
Sbjct: 111 LGGVDPITEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITFEQGLKLLQM 170
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
E+++RL I+ V +V K+GI+ + +K +
Sbjct: 171 CTDELKRRLPIDFKGVLVKVVRKEGIEEVDFDNSKQV 207
>gi|242209688|ref|XP_002470690.1| predicted protein [Postia placenta Mad-698-R]
gi|220730267|gb|EED84127.1| predicted protein [Postia placenta Mad-698-R]
Length = 194
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 91/149 (61%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDT+QFAE++ +NI+LY++RN Y L P +AA + R+ LA+ LRSR PY N+L
Sbjct: 44 MAFSGEPGDTLQFAEYVERNIRLYQIRNTYALRPPSAASWIRRSLADSLRSRRPYAVNLL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D P L+++DYL +L +P+ HGY LS++ YH
Sbjct: 104 IGGYDTSTSTPHLYWVDYLGTLSPVPFGAHGYGSYFGLSLLDRYHDPEATLEEGLDTLRR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV KRL+++ +KV +V KDG++ +
Sbjct: 164 CIDEVSKRLVVSPGKYKVKIVDKDGVREI 192
>gi|330914577|ref|XP_003296695.1| hypothetical protein PTT_06861 [Pyrenophora teres f. teres 0-1]
gi|311331036|gb|EFQ95202.1| hypothetical protein PTT_06861 [Pyrenophora teres f. teres 0-1]
Length = 261
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G++GDTVQFAE+I N+QLY MRN ELSP A A + R +LA LRSR PY N+L
Sbjct: 102 MTFSGEAGDTVQFAEYIQANVQLYSMRNNMELSPAATANFVRGELARALRSRKPYTVNLL 161
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D + P L++IDYLAS +PY HGY LS++ ++H
Sbjct: 162 LGGYDTIADKPTLYWIDYLASQASLPYAAHGYAQYYCLSLLDKHHHPDINYEQGIKILRM 221
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
E+++RL I+ V +++KDGIK
Sbjct: 222 CTEELKRRLPIDFKGVLVKVITKDGIK 248
>gi|398395621|ref|XP_003851269.1| proteasome core particle subunit beta 4, partial [Zymoseptoria
tritici IPO323]
gi|339471148|gb|EGP86245.1| hypothetical protein MYCGRDRAFT_44624 [Zymoseptoria tritici IPO323]
Length = 202
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 91/150 (60%), Gaps = 17/150 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE++ N+QLY MRN L+P A + R +LA+ LRSR+PYN N+L
Sbjct: 43 MAFSGEAGDTVQFAEYVQANVQLYSMRNSNHLTPYETASFIRSELAKSLRSRNPYNVNLL 102
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D + PQLF+IDYLAS +PY HGY LS + ++H
Sbjct: 103 LGGYDTIADKPQLFWIDYLASCAPLPYAAHGYAQYYCLSTLDKHHHPDITFEQGMKILRM 162
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+++R+ ++ V +++KDG++ P
Sbjct: 163 CTDELKRRMPVDFKGVLVKVITKDGVREEP 192
>gi|226292572|gb|EEH47992.1| proteasome component C11 [Paracoccidioides brasiliensis Pb18]
Length = 182
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 93/157 (59%), Gaps = 17/157 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N+QLY MRN ELSP A A + R +L+ LRSR PY N+L
Sbjct: 23 MAFSGEAGDTVQFAEYIQANVQLYSMRNETELSPSAVANFVRGELSRSLRSRRPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P L+++DYLA+L +PY HGY LSI+ ++H
Sbjct: 83 LGGVDPITEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITFEQGLKLLQM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
E+++RL I+ V +V K+GI+ + +K +
Sbjct: 143 CTDELKRRLPIDFKGVLVKVVRKEGIEEVDFDNSKQV 179
>gi|19113828|ref|NP_592916.1| 20S proteasome component beta 4 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1172609|sp|Q09720.1|PSB4_SCHPO RecName: Full=Probable proteasome subunit beta type-4
gi|914882|emb|CAA90462.1| 20S proteasome component beta 4 (predicted) [Schizosaccharomyces
pombe]
Length = 194
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 87/149 (58%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M G++GDT FAE+IA NI LY +R+ LSP A A +TRKQLA LRSR PY N+L
Sbjct: 44 MLYCGEAGDTTNFAEYIAANISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNIL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+AG++ G P+LF++DYLA+ + +PY GY LSI Y++
Sbjct: 104 LAGYETNLGKPELFWLDYLATCVRVPYACQGYSSFYCLSIFDRYYKPDLTIDEAVRIMKL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E++KR+ I+ F +V KDGI+ +
Sbjct: 164 CFDELKKRMPIDFKGFICKVVDKDGIREI 192
>gi|71020191|ref|XP_760326.1| hypothetical protein UM04179.1 [Ustilago maydis 521]
gi|46100035|gb|EAK85268.1| hypothetical protein UM04179.1 [Ustilago maydis 521]
Length = 194
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDT+QF+E+I +N +LY +RN EL P++AA + RKQLAE LRSR+PY N L
Sbjct: 44 MAYSGEPGDTLQFSEWIERNSRLYSIRNHVELRPKSAAAWIRKQLAESLRSRNPYQVNYL 103
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D P P L++IDYL +L +P+ HGY +S + YHR
Sbjct: 104 LGGFDLPNSEPALYWIDYLGTLATVPFAAHGYGAFFAMSTLDRYHRPDMSLEEGLDLLRR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
+E+++R I+++ F V +V ++G +
Sbjct: 164 CINELKQRFIVDLGTFTVRVVDREGAR 190
>gi|403418699|emb|CCM05399.1| predicted protein [Fibroporia radiculosa]
Length = 194
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 89/149 (59%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTVQFAE++ +NI+LY++RN Y L P +AA + R+ LA+ +RSR PY N+L
Sbjct: 44 MAFSGEPGDTVQFAEYVERNIRLYQIRNTYALRPSSAASWIRRTLADSIRSRKPYAVNLL 103
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D P L+++DYL + +P+ HGY LS++ YH
Sbjct: 104 VGGYDTSTHTPSLYWVDYLGTQASVPFGAHGYGSYFALSLLDRYHNPEATLEEGLDTLRR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV KRLI+ +KV +V KDG++ +
Sbjct: 164 CIDEVSKRLIVAPGKYKVKIVDKDGVREI 192
>gi|407921804|gb|EKG14942.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
Length = 205
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G++GDTVQFAE+I NIQLY MRN +L P A A + R +LA LRSR PY N+L
Sbjct: 46 LAFSGEAGDTVQFAEYIQANIQLYSMRNDTDLGPSAVASFVRGELARALRSRRPYTVNLL 105
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP + P L++IDYLA+L +PY HGY LSI+ ++H
Sbjct: 106 LGGMDPITDKPSLYWIDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDISLEQGMKILRM 165
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
E+++RL I+ V +++K+GI+
Sbjct: 166 CSDELKRRLPIDFKGLVVKVITKEGIQ 192
>gi|195386820|ref|XP_002052102.1| GJ17369 [Drosophila virilis]
gi|194148559|gb|EDW64257.1| GJ17369 [Drosophila virilis]
Length = 193
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 90/151 (59%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A GD GDT+QF ++IAK++QLYK+ N Y L+PR A++TRK LA+Y+R+ + Y +ML
Sbjct: 16 LAAVGDGGDTLQFTDYIAKHLQLYKISNNYHLTPRGTAHFTRKNLADYIRTNTRYQVSML 75
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D EGP L +ID + + I + HG + SI Y
Sbjct: 76 MAGYDVIEGPDLHYIDSYGAAMPINHAGHGLGSLFCGSIFQRYWTEGLKPTQAYDILKMC 135
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
+E+QKRLIIN+ NF V +V ++G + L I
Sbjct: 136 VAEIQKRLIINLRNFDVFIVDRNGTRQLESI 166
>gi|396457862|ref|XP_003833544.1| similar to proteasome subunit beta type-2 [Leptosphaeria maculans
JN3]
gi|312210092|emb|CBX90179.1| similar to proteasome subunit beta type-2 [Leptosphaeria maculans
JN3]
Length = 182
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N+QLY MRN ELSP A A + R +LA LRSR PY N+L
Sbjct: 23 MAFSGEAGDTVQFAEYIQANVQLYSMRNDMELSPAATANFVRGELARALRSRKPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D ++ P L++IDYLAS +PY HGY LS++ ++H
Sbjct: 83 LGGYDTIKDKPTLYWIDYLASQAALPYAAHGYAQYYCLSLLDKHHHPDIDYEQGIKILRM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
E+++RL I+ V +++K+GIK
Sbjct: 143 CTEELKRRLPIDFKGVFVKVITKNGIK 169
>gi|255723451|ref|XP_002546659.1| proteasome component C11 [Candida tropicalis MYA-3404]
gi|240130790|gb|EER30353.1| proteasome component C11 [Candida tropicalis MYA-3404]
Length = 194
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 90/150 (60%), Gaps = 18/150 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
+A TG++GDTVQFAE++ NIQLY MR N ELSP+A A + R QLA LRSR PY N
Sbjct: 44 IAYTGEAGDTVQFAEYVQANIQLYSMRENDIELSPKATASFVRTQLATSLRSRKPYQVNC 103
Query: 60 LIAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------ 106
LI G+D + P L +IDYL + +E+PY HGY T S++ +++R
Sbjct: 104 LIGGYDVKTNKPSLNWIDYLGTQVELPYGAHGYAAFYTTSLLDKHYRKEMTVEEGLKLMD 163
Query: 107 ----EVQKRLIINVPNFKVTMVSKDGIKHL 132
E+Q+R+ I+ + +V KDGI+ L
Sbjct: 164 MCVEELQRRMPIDFKGVYIKVVDKDGIRQL 193
>gi|194854891|ref|XP_001968442.1| GG24870 [Drosophila erecta]
gi|190660309|gb|EDV57501.1| GG24870 [Drosophila erecta]
Length = 210
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 94/160 (58%), Gaps = 16/160 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA GD GDT+QF ++I+KN+ LYK+ +GY LS ++AA++TRK LA+Y+R+ + Y ML
Sbjct: 46 MATVGDGGDTIQFTDYISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAML 105
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D EGP L +ID + I + HG+ + SI+ Y S
Sbjct: 106 LAGYDGVEGPDLHYIDSYGAAQPINHAGHGWGSMFCGSILQRYWNSRLTQADAYSLMKKC 165
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEEN 144
E+Q+RLIIN NF V +V G++ + I ++ +E+
Sbjct: 166 VLEIQRRLIINQRNFDVYVVDSKGMRKMEAINPGSLNKES 205
>gi|171693511|ref|XP_001911680.1| hypothetical protein [Podospora anserina S mat+]
gi|170946704|emb|CAP73507.1| unnamed protein product [Podospora anserina S mat+]
Length = 182
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFA++I N QLY MRN +LSP A A++ R +LA LRSR+PYN N+L
Sbjct: 23 MAYSGEAGDTVQFADYIQANAQLYSMRNESDLSPSALAHFVRGELATSLRSRNPYNVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP L+++DYLASL +PY HGY LSI+ ++H
Sbjct: 83 LGGVDPITHKSSLYWLDYLASLAPVPYAAHGYAQYYCLSILDKHHHPDITLGQGIKLLTL 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V V+KDG+
Sbjct: 143 CVDELKRRLPIDFKGMTVKAVTKDGV 168
>gi|149238379|ref|XP_001525066.1| proteasome component C11 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451663|gb|EDK45919.1| proteasome component C11 [Lodderomyces elongisporus NRRL YB-4239]
Length = 197
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 90/148 (60%), Gaps = 18/148 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
+A TG+SGDT+QF+E+ NIQLY MR + ELSP+A A Y R LA +RSR PY N
Sbjct: 44 IAFTGESGDTIQFSEYAQANIQLYSMREDEVELSPKATASYVRNLLATSIRSRKPYQVNC 103
Query: 60 LIAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------ 106
LIAG+D + P L++IDYL +L+E+PY HGY T S++ +++R
Sbjct: 104 LIAGYDIKTQKPSLYYIDYLGTLVELPYGAHGYAAFYTTSLLDKHYRKGMSVEQGLELMK 163
Query: 107 ----EVQKRLIINVPNFKVTMVSKDGIK 130
E+QKR+ I+ V +V KDGI+
Sbjct: 164 MCVEELQKRMPIDFKGVYVKVVDKDGIR 191
>gi|212537603|ref|XP_002148957.1| proteasome component Pre1, putative [Talaromyces marneffei ATCC
18224]
gi|210068699|gb|EEA22790.1| proteasome component Pre1, putative [Talaromyces marneffei ATCC
18224]
Length = 203
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 88/149 (59%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GD VQFAE+I N+QLY MRN ELSP A + R +LA LRSR+PY N+L
Sbjct: 44 MAFSGEPGDGVQFAEYIQANVQLYSMRNDTELSPAAVGNFVRGELARALRSRNPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D P L+++DYLASL E+PY HGY LSI+ ++H
Sbjct: 104 LGGVDAITNTPSLYWVDYLASLAEVPYAAHGYAQYYCLSILDKHHHPDIDLEQGLKLLNL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +V+KDGI+ +
Sbjct: 164 CTDELKRRLPIDFKGVLVKVVTKDGIEEI 192
>gi|367000023|ref|XP_003684747.1| hypothetical protein TPHA_0C01570 [Tetrapisispora phaffii CBS 4417]
gi|357523044|emb|CCE62313.1| hypothetical protein TPHA_0C01570 [Tetrapisispora phaffii CBS 4417]
Length = 195
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 91/147 (61%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M TG++GDTVQFAE+I NIQL+ +R YELSP A + + R++LA+ LR+R P+ N+L
Sbjct: 44 MTFTGEAGDTVQFAEYIQANIQLHDIRENYELSPNAVSSFVRQELAKSLRTRKPFQVNVL 103
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------- 106
I G+D E P+L+ IDYL + + +PY HGY G T S++ ++RS
Sbjct: 104 IGGYDIKTESPELYQIDYLGTKVSLPYAAHGYSGFYTFSLLDHHYRSDMTTEDGLKLLKL 163
Query: 107 ---EVQKRLIINVPNFKVTMVSKDGIK 130
E+++R+ ++ V +V K+GI+
Sbjct: 164 CIEELERRMPVDFKGVIVKIVDKEGIR 190
>gi|380475294|emb|CCF45323.1| proteasome subunit beta type-2 [Colletotrichum higginsianum]
Length = 203
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+SGDTVQFA++I N QLY MRN +LSP A + R +LA LRSR PYN N+L
Sbjct: 44 IAYSGESGDTVQFADYIQANSQLYSMRNETDLSPSGLANFVRGELASSLRSRKPYNVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP + P L+++DYLASL +PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITQKPALYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDITLGQGIKILNL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V V+KDGI
Sbjct: 164 CTDELKRRLPIDFKGMTVKAVTKDGI 189
>gi|310794363|gb|EFQ29824.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 203
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+SGDTVQFA++I N QLY MRN +LSP A + R +LA LRSR PYN N+L
Sbjct: 44 IAYSGESGDTVQFADYIQANSQLYSMRNETDLSPSGLANFVRGELASSLRSRKPYNVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP + P L+++DYLASL +PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITQKPALYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDITLGQGIKILNM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V V+KDGI
Sbjct: 164 CTDELKRRLPIDFKGMTVKAVTKDGI 189
>gi|290999893|ref|XP_002682514.1| 20S proteasome, A and B subunits [Naegleria gruberi]
gi|284096141|gb|EFC49770.1| 20S proteasome, A and B subunits [Naegleria gruberi]
Length = 209
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 99/161 (61%), Gaps = 19/161 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G+ GD VQF EFI KN+ LY++RN LS +A+A++ R++LA+ LRS PY N++
Sbjct: 46 IAAQGEQGDRVQFVEFITKNLNLYRLRNDTNLSVKASAHFVRQELAKALRS-GPYQTNIM 104
Query: 61 IAGHDPEEG--PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR------------- 105
+ G D EG P+L++IDYL+S+ E+ Y HGY TLSI+ ++++
Sbjct: 105 VGGVDDIEGAKPELYYIDYLSSMQEVKYGAHGYGSYFTLSILDKHYKDGMNLNEALIVLR 164
Query: 106 ---SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEE 143
+E+QKRL++N P+F V +V K G + + + +P +
Sbjct: 165 MCVAEIQKRLLLNTPSFIVKVVDKYGSREVDLFSDQTLPAD 205
>gi|346974240|gb|EGY17692.1| proteasome component C11 [Verticillium dahliae VdLs.17]
Length = 225
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N QLY MRN +LSP A +++ R +LA LRSR PYN N+L
Sbjct: 66 MAFSGEAGDTVQFAEYIQANAQLYSMRNETDLSPSAISHFVRGELASSLRSRKPYNVNLL 125
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L+++DYLAS+ +PY HGY LSI+ ++H
Sbjct: 126 LGGVDPITLKPALYWMDYLASMAPVPYAAHGYAQYYCLSILDKHHHPDITLGQGIKILNM 185
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++R+ I+ V V+KDG+
Sbjct: 186 CTDELKRRMPIDFKGMLVKAVTKDGV 211
>gi|390604826|gb|EIN14217.1| N-terminal nucleophile aminohydrolase [Punctularia strigosozonata
HHB-11173 SS5]
Length = 194
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 91/149 (61%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GDTVQFAE+I +N++LY++RN + L+P +AA + R+ LAE +RSR PY N+L
Sbjct: 44 MTYSGEPGDTVQFAEYIERNLRLYQIRNYFALTPPSAAAWIRRSLAESIRSRKPYAVNLL 103
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D P L++IDYL ++ +P+ HGY LS++ YH
Sbjct: 104 LGGYDTTTHTPHLYWIDYLGTMATVPFAAHGYGSYFALSLLDRYHDPEATLDEGLATLKR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV KRL+++ +KV ++ KDG++ +
Sbjct: 164 CIDEVAKRLVVSPEKYKVKVIDKDGVREV 192
>gi|302416735|ref|XP_003006199.1| proteasome component C11 [Verticillium albo-atrum VaMs.102]
gi|261355615|gb|EEY18043.1| proteasome component C11 [Verticillium albo-atrum VaMs.102]
Length = 182
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N QLY MRN +LSP A +++ R +LA LRSR PYN N+L
Sbjct: 23 MAFSGEAGDTVQFAEYIQANAQLYSMRNETDLSPSAISHFVRGELASSLRSRKPYNVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L+++DYLAS+ +PY HGY LSI+ ++H
Sbjct: 83 LGGVDPITLKPALYWMDYLASMAPVPYAAHGYAQYYCLSILDKHHHPDITLGQGIKILNM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++R+ I+ V V+KDG+
Sbjct: 143 CTDELKRRMPIDFKGMLVKAVTKDGV 168
>gi|260941416|ref|XP_002614874.1| hypothetical protein CLUG_04889 [Clavispora lusitaniae ATCC 42720]
gi|238851297|gb|EEQ40761.1| hypothetical protein CLUG_04889 [Clavispora lusitaniae ATCC 42720]
Length = 221
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A TG+SGDTVQFAE++ NIQLY MR +ELSP+A A + R QLA +RSR PY N+L
Sbjct: 71 VAYTGESGDTVQFAEYVQANIQLYTMRENHELSPQATASFVRNQLATSIRSRKPYQVNVL 130
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------- 106
I G+D + G L +IDYL + +E+PY HGY +S+ ++R+
Sbjct: 131 IGGYDTKTGAASLNWIDYLGTQVELPYAAHGYAAFYCMSLFDRHYRADMSVDDGLELMRR 190
Query: 107 ---EVQKRLIINVPNFKVTMVSKDGIK 130
E++ R+ ++ V +V KDGI+
Sbjct: 191 GLKELETRMPVDFKGVYVKVVDKDGIR 217
>gi|68467871|ref|XP_722094.1| hypothetical protein CaO19.11508 [Candida albicans SC5314]
gi|68468188|ref|XP_721933.1| hypothetical protein CaO19.4025 [Candida albicans SC5314]
gi|46443876|gb|EAL03155.1| hypothetical protein CaO19.4025 [Candida albicans SC5314]
gi|46444042|gb|EAL03320.1| hypothetical protein CaO19.11508 [Candida albicans SC5314]
gi|238882904|gb|EEQ46542.1| proteasome component C11 [Candida albicans WO-1]
Length = 196
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 90/150 (60%), Gaps = 18/150 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
+A TG++GDTVQFAE++ NIQLY MR N ELSP+A A + R QLA LRSR PY N
Sbjct: 44 IAYTGEAGDTVQFAEYVQANIQLYSMRENDIELSPKATASFVRNQLASSLRSRKPYQVNC 103
Query: 60 LIAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR------------- 105
LI G+D ++ P L +IDYL + +E+PY HGY T S++ +++R
Sbjct: 104 LIGGYDVKKNEPSLNWIDYLGTQVELPYGAHGYAAFYTTSLLDKHYRKDMTVEDGLKLMD 163
Query: 106 ---SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+Q R+ I+ + +V KDGI+ +
Sbjct: 164 MCVKELQTRMPIDFKGVYIKVVDKDGIRQI 193
>gi|255717008|ref|XP_002554785.1| KLTH0F13750p [Lachancea thermotolerans]
gi|238936168|emb|CAR24348.1| KLTH0F13750p [Lachancea thermotolerans CBS 6340]
Length = 195
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 94/149 (63%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GD VQF+E+I NIQLY +R YELSP+A + + R++LA+ +RSR PY N+L
Sbjct: 44 MAYSGEAGDAVQFSEYIQANIQLYSIRENYELSPKAVSSFVRQELAKSIRSRRPYQVNVL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D ++ P+L+ IDYL + +E+PY HGY G T S++ ++R
Sbjct: 104 IGGYDAHQKKPELYQIDYLGTKVELPYAAHGYSGFYTFSLLDHHYRPDMTVEEGLKLLKL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+Q+R+ ++ V +V ++G++ +
Sbjct: 164 CIEELQRRMPVDFKGVLVKVVDENGVREV 192
>gi|242808715|ref|XP_002485222.1| proteasome component Pre1, putative [Talaromyces stipitatus ATCC
10500]
gi|218715847|gb|EED15269.1| proteasome component Pre1, putative [Talaromyces stipitatus ATCC
10500]
Length = 203
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 88/149 (59%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GD VQFAE+I N+QLY MRN ELSP A + R +LA LRSR+PY N+L
Sbjct: 44 MAFSGEPGDGVQFAEYIQANVQLYSMRNDSELSPAAVGNFVRGELARALRSRNPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D P L+++DYLASL ++PY HGY LSI+ ++H
Sbjct: 104 LGGVDAITNTPSLYWVDYLASLAQVPYAAHGYAQYYCLSILDKHHHPDIELEQGLKLLNL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +V+KDGI+ +
Sbjct: 164 CTDELKRRLPIDFKGVLVKVVTKDGIQEI 192
>gi|159125011|gb|EDP50128.1| proteasome component Pre1, putative [Aspergillus fumigatus A1163]
Length = 212
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 89/149 (59%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N+ LY MRN EL P A A + R +LA LRSR+PY N+L
Sbjct: 53 MAFSGEAGDTVQFAEYIQANVALYTMRNDTELRPNAVANFVRGELARSLRSRNPYTVNLL 112
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D + P L++IDYL++L +PY HGY LSI+ ++H
Sbjct: 113 LGGVDSITQEPHLYWIDYLSALARVPYAAHGYAQYYCLSILDKHHHPDISLEQGMKLLQM 172
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +V+KDG+K +
Sbjct: 173 CTDELKRRLPIDYKGVLVKVVTKDGVKEV 201
>gi|168018248|ref|XP_001761658.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687029|gb|EDQ73414.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 102/175 (58%), Gaps = 24/175 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ VTG+SGD VQF+E+I KNI LY+ RNG LS AAA +TR +LA LR ++PY NM+
Sbjct: 44 LGVTGESGDRVQFSEYIQKNILLYQYRNGIPLSTSAAANFTRGELATALR-KNPYEVNMM 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
IAG D ++GP L+++DY+++L ++ GY LS+M Y+
Sbjct: 103 IAGWDKDQGPSLYYLDYISTLHKVEKGGMGYGAYFLLSLMDRYYEKNMSLEKALELVDMC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEENKGIPETEQYAAIPVA 159
EV+ RL+++ PNF + +V KDG + L + E+ +G P AA P+A
Sbjct: 163 IEEVRSRLVVSPPNFIIKIVDKDGARELA---WRRTVEDKQGPPS----AAAPIA 210
>gi|241956129|ref|XP_002420785.1| proteasome subunit, putative [Candida dubliniensis CD36]
gi|223644127|emb|CAX41870.1| proteasome subunit, putative [Candida dubliniensis CD36]
Length = 196
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 89/150 (59%), Gaps = 18/150 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
+A TG++GDTVQFAE++ NIQLY MR N ELSP+A A + R QLA LRSR PY N
Sbjct: 44 IAYTGEAGDTVQFAEYVQANIQLYSMRENDIELSPKATASFVRNQLASSLRSRKPYQVNC 103
Query: 60 LIAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR------------- 105
LI G+D + P L +IDYL + +E+PY HGY T S++ +++R
Sbjct: 104 LIGGYDVKTNQPSLNWIDYLGTQVELPYGAHGYAAFYTTSLLDKHYRKDMTVEDGLKLMD 163
Query: 106 ---SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+Q R+ I+ + +V KDGI+ +
Sbjct: 164 MCVKELQTRMPIDFKGVYIKVVDKDGIRQI 193
>gi|70994594|ref|XP_752074.1| proteasome component Pre1 [Aspergillus fumigatus Af293]
gi|66849708|gb|EAL90036.1| proteasome component Pre1, putative [Aspergillus fumigatus Af293]
Length = 212
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 88/147 (59%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N+ LY MRN EL P A A + R +LA LRSR+PY N+L
Sbjct: 53 MAFSGEAGDTVQFAEYIQANVALYTMRNDTELRPNAVANFVRGELARSLRSRNPYTVNLL 112
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D + P L++IDYL++L +PY HGY LSI+ ++H
Sbjct: 113 LGGVDSITQEPHLYWIDYLSALARVPYAAHGYAQYYCLSILDKHHHPDISLEQGMKLLQM 172
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
E+++RL I+ V +V+KDG+K
Sbjct: 173 CTDELKRRLPIDYKGVLVKVVTKDGVK 199
>gi|410084030|ref|XP_003959592.1| hypothetical protein KAFR_0K01010 [Kazachstania africana CBS 2517]
gi|372466184|emb|CCF60457.1| hypothetical protein KAFR_0K01010 [Kazachstania africana CBS 2517]
Length = 195
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 91/149 (61%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ G++GDTVQFAE+I N+QLY +R +ELSP A + + R +LA+ +RSR PY N+L
Sbjct: 44 MSFAGEAGDTVQFAEYIQANMQLYAIRENFELSPNAVSSFVRNELAKSIRSRKPYQVNVL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D + P+L+ IDYL + +E+PY HGY G T S++ ++R
Sbjct: 104 IGGYDIKNNKPELYQIDYLGTKVELPYAAHGYSGFYTFSLLDRHYRPDMSLEDGLKLLKL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
+E+ KR+ ++ V +V KDGI+ L
Sbjct: 164 CIAELDKRMPVDFKGVIVKVVDKDGIRIL 192
>gi|444319602|ref|XP_004180458.1| hypothetical protein TBLA_0D04430 [Tetrapisispora blattae CBS 6284]
gi|387513500|emb|CCH60939.1| hypothetical protein TBLA_0D04430 [Tetrapisispora blattae CBS 6284]
Length = 195
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 90/146 (61%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTV FAE+I N+QLY +R ELSP+A + + RK+LA+ +RSR PY N+L
Sbjct: 44 MAFSGEAGDTVNFAEYIQANVQLYTIRENNELSPQAVSSFVRKELAKSIRSRKPYQVNVL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D + PQL+ IDYL + +E+PY HGY G T S++ ++R
Sbjct: 104 IGGYDSTSKKPQLYQIDYLGTKVELPYAAHGYSGFYTFSLLDHHYRPDMTKEEGLDLLKK 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+QKR+ I+ V +V ++G+
Sbjct: 164 CIEELQKRMPIDFKGVLVKIVDENGV 189
>gi|354543265|emb|CCE39983.1| hypothetical protein CPAR2_100210 [Candida parapsilosis]
Length = 194
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 92/150 (61%), Gaps = 18/150 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
+A TG++GDT+QFAE++ NIQLY MR + E+SP+A A Y R QLA +RSR PY N
Sbjct: 44 IAFTGEAGDTIQFAEYVQANIQLYSMREDDVEMSPKATASYVRNQLATSIRSRKPYQVNC 103
Query: 60 LIAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR------------- 105
LIAG+D + + P L +IDYL + +E+PY HGY T+S++ +++R
Sbjct: 104 LIAGYDTKTDKPSLNYIDYLGTQVELPYGAHGYAAFYTMSLLDKHYRKDMNVDDGLRLMD 163
Query: 106 ---SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+Q R+ I+ + +V K+GIK +
Sbjct: 164 MCIKELQTRMPIDFKGVYIKVVDKNGIKKI 193
>gi|261201492|ref|XP_002627146.1| proteasome component Pre1 [Ajellomyces dermatitidis SLH14081]
gi|239592205|gb|EEQ74786.1| proteasome component Pre1 [Ajellomyces dermatitidis SLH14081]
gi|239611637|gb|EEQ88624.1| proteasome component Pre1 [Ajellomyces dermatitidis ER-3]
gi|327348351|gb|EGE77208.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
Length = 182
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 93/157 (59%), Gaps = 17/157 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I N QLY MRN ELSP A A + R +LA LRSR PY N+L
Sbjct: 23 MAFSGEAGDTVQFAEYIQANAQLYSMRNESELSPSAVASFVRGELARSLRSRRPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP E P L+++DYLA+L +PY HGY LSI+ ++H
Sbjct: 83 LGGVDPLTEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLEQGLKLLEM 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
E+++RL I+ V +V K+GI+ +P +K +
Sbjct: 143 CTDELKRRLPIDFKGVLVKVVKKEGIEEVPFDNSKQV 179
>gi|440468038|gb|ELQ37223.1| proteasome component C11 [Magnaporthe oryzae Y34]
gi|440487532|gb|ELQ67316.1| proteasome component C11 [Magnaporthe oryzae P131]
Length = 233
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 88/149 (59%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GDT+QFAE+I N +LY MRN +LSP A A+Y R +LA LRSR PY N+L
Sbjct: 74 IAFSGEPGDTIQFAEYIMANAKLYSMRNETDLSPSALAHYVRGELASSLRSRKPYTVNLL 133
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L+++DYLA+L +PY HGY LSI+ ++H
Sbjct: 134 LGGVDPITHKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKILTM 193
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V V+KDGI+ +
Sbjct: 194 CTDELKRRLPIDFKGMVVKAVTKDGIRDI 222
>gi|50304199|ref|XP_452049.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641181|emb|CAH02442.1| KLLA0B11660p [Kluyveromyces lactis]
Length = 195
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 91/147 (61%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ +G++GDTVQFAE+I N+QLY +R YELSP AA+ + R +LA+ LRSR P+ N+L
Sbjct: 44 MSFSGEAGDTVQFAEYIQANMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVL 103
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D + E +L+ IDYL + +E+PY HGY G T S++ ++R
Sbjct: 104 IGGYDTKNEKAELYQIDYLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQ 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
E++ R+ ++ V +V KDG++
Sbjct: 164 CVQELELRMPVDFKGVIVKIVDKDGVR 190
>gi|296420572|ref|XP_002839843.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636049|emb|CAZ84034.1| unnamed protein product [Tuber melanosporum]
Length = 175
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 90/149 (60%), Gaps = 19/149 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNG--YELSPRAAAYYTRKQLAEYLRSRSPYNCN 58
MA +G++GDTVQFAE+I N+QLY MRN ++LSP A A + R+QLA+ LRSR+PY N
Sbjct: 23 MAFSGEAGDTVQFAEYIQANVQLYGMRNNSKWQLSPSAVASFVRRQLAKSLRSRNPYYVN 82
Query: 59 MLIAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYH------------- 104
+LI G D G P L+++DYLAS +PY HGY LSI+ ++H
Sbjct: 83 LLIGGFDCTTGKPHLYWLDYLASSAAVPYAAHGYAQYYCLSILDKHHHPDITLEEGIKLM 142
Query: 105 ---RSEVQKRLIINVPNFKVTMVSKDGIK 130
E+ KRL I+ V V+++G++
Sbjct: 143 RMCHDELIKRLPIDFKGLTVKAVTENGVE 171
>gi|448532264|ref|XP_003870391.1| Pre1 beta 4 subunit of the 20S proteasome [Candida orthopsilosis Co
90-125]
gi|380354746|emb|CCG24261.1| Pre1 beta 4 subunit of the 20S proteasome [Candida orthopsilosis]
Length = 194
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 91/150 (60%), Gaps = 18/150 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
+A TG++GDT+QFAE++ NIQLY MR + E+SP+A A Y R QLA +RSR PY N
Sbjct: 44 IAFTGEAGDTIQFAEYVQANIQLYSMREDDVEMSPKATASYVRNQLATSIRSRKPYQVNC 103
Query: 60 LIAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR------------- 105
LIAG+D + + P L +IDYL + +E+PY HGY +S++ +++R
Sbjct: 104 LIAGYDTKTDKPSLNYIDYLGTQVELPYGAHGYAAFYAMSLLDKHYRKDMNIDDGLRLMD 163
Query: 106 ---SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+Q R+ I+ V +V KDGI+ +
Sbjct: 164 MCIKELQTRMPIDFKGVYVKVVDKDGIRKI 193
>gi|389635121|ref|XP_003715213.1| proteasome subunit beta type-2 [Magnaporthe oryzae 70-15]
gi|351647546|gb|EHA55406.1| proteasome subunit beta type-2 [Magnaporthe oryzae 70-15]
Length = 203
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 88/149 (59%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GDT+QFAE+I N +LY MRN +LSP A A+Y R +LA LRSR PY N+L
Sbjct: 44 IAFSGEPGDTIQFAEYIMANAKLYSMRNETDLSPSALAHYVRGELASSLRSRKPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L+++DYLA+L +PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITHKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKILTM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V V+KDGI+ +
Sbjct: 164 CTDELKRRLPIDFKGMVVKAVTKDGIRDI 192
>gi|345567847|gb|EGX50749.1| hypothetical protein AOL_s00054g835 [Arthrobotrys oligospora ATCC
24927]
Length = 200
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 89/149 (59%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G++GDT+QFAEFI N QLY MR+ +L + A + R +LA LRSR PY NML
Sbjct: 49 LAFSGEAGDTIQFAEFIQANTQLYTMRHSSDLPVSSVASFVRTELASSLRSRHPYTVNML 108
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------- 106
I G+D +E PQL+++DYLAS EIPY HGY LSI+ +++
Sbjct: 109 IGGYDTKKEEPQLYWLDYLASSAEIPYAAHGYAQYYCLSILDAHYKKGMGVEEVAGLMKD 168
Query: 107 ---EVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++R+ I+ V +V KDGI+ L
Sbjct: 169 CHEELKRRMPIDFKGLLVKIVDKDGIREL 197
>gi|302696841|ref|XP_003038099.1| hypothetical protein SCHCODRAFT_83883 [Schizophyllum commune H4-8]
gi|300111796|gb|EFJ03197.1| hypothetical protein SCHCODRAFT_83883 [Schizophyllum commune H4-8]
Length = 194
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 88/149 (59%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTVQFAE++ +NI+LY++R+ Y L P AAA + R+ LAE LRSR PY+ N+L
Sbjct: 44 MAYSGEPGDTVQFAEYVERNIRLYQIRHHYALRPSAAASWIRRSLAESLRSRHPYSVNLL 103
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D +E L++IDYL + +P+ HGY LS YH
Sbjct: 104 VGGFDTAQETAHLYWIDYLGTSTPVPFAAHGYGSYFALSTFDRYHNPDATVEEGLATLKR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV RL+++ +KV +V K+GI+ L
Sbjct: 164 CIDEVALRLVVSPGKYKVKIVDKNGIREL 192
>gi|388855719|emb|CCF50707.1| probable multicatalytic endopeptidase complex chain PRE1 [Ustilago
hordei]
Length = 194
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 89/147 (60%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GDT+QF+E+I +N +LY +RN EL P++AA + RK+LAE LRSR+ Y N+L
Sbjct: 44 MTFSGEPGDTLQFSEWIERNSRLYSIRNHVELRPKSAASWIRKELAESLRSRNAYQVNLL 103
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D P P L++IDYL +L +P+ HGY +S + YHR
Sbjct: 104 LGGFDLPSSEPALYWIDYLGTLATVPFAAHGYGAFFAMSTLDRYHRPDMSLEEGLDLLRR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
+E+++R I+++ F + +V ++G +
Sbjct: 164 CINELKQRFIVDLGTFTIRVVDREGAR 190
>gi|301766254|ref|XP_002918555.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-2-like
[Ailuropoda melanoleuca]
Length = 212
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 91/145 (62%), Gaps = 17/145 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I +N LYK +N YE SP AAA + + + +YLRSR+P + N+L
Sbjct: 42 LLCVGEAGDTVQFAEYIQQNEPLYKGQNHYERSPIAAANFPHQHVTDYLRSRTPCHVNLL 101
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYI-THGYPGIVTLSIMGEYHR-------------- 105
+AG D EGP +++ DYLA+L + P+ HGY +TLSI+ Y+
Sbjct: 102 LAGSDEHEGPAIYYTDYLAALAKAPFAPAHGYGAFLTLSILDRYYTPTISCERAVELLRK 161
Query: 106 --SEVQKRLIINVPNFKVTMVSKDG 128
E++K I+N+PNF V +++K+G
Sbjct: 162 YPEELKKCFILNLPNFSVXIINKNG 186
>gi|168016366|ref|XP_001760720.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688080|gb|EDQ74459.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 101/175 (57%), Gaps = 20/175 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ VTG+SGD VQF+E+I KNI LY+ RNG LS AAA +TR +LA LR +SPY NM+
Sbjct: 44 LGVTGESGDRVQFSEYIQKNILLYQYRNGIPLSTAAAANFTRGELATALR-KSPYQVNMM 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
IAG + ++GP L+++DY+++L ++ GY LS+M Y+
Sbjct: 103 IAGWEKDQGPSLYYLDYISTLHKLEKGGMGYGAYFLLSLMDRYYEKNMSLEKALELVDKC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEENKGIPETEQYAAIPVA 159
EV+ RL+ + PNF V +V KDG + L + E+ +G P + A P++
Sbjct: 163 IKEVRSRLVASPPNFIVKIVDKDGARELA---WRRTVEDQQGPPSSSAPEASPMS 214
>gi|121706829|ref|XP_001271642.1| proteasome component Pre1, putative [Aspergillus clavatus NRRL 1]
gi|119399790|gb|EAW10216.1| proteasome component Pre1, putative [Aspergillus clavatus NRRL 1]
Length = 182
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDTVQFAE+I NI LY MRN EL P+A A + R +LA LRSR+PY N+L
Sbjct: 23 MAYSGEAGDTVQFAEYIQANIALYTMRNDTELRPKAVANFVRGELARSLRSRNPYTVNLL 82
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D + P L++IDYL++L +PY HGY LSI+ ++H
Sbjct: 83 LGGVDTITQEPHLYWIDYLSALAPVPYAAHGYAQYYCLSILDKHHHPDISLEQGMKLLQL 142
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +V+KDG++ +
Sbjct: 143 CTDELKRRLPIDYKGVLVKVVTKDGVEEV 171
>gi|254582206|ref|XP_002497088.1| ZYRO0D15158p [Zygosaccharomyces rouxii]
gi|238939980|emb|CAR28155.1| ZYRO0D15158p [Zygosaccharomyces rouxii]
Length = 195
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 90/149 (60%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ G++GD+VQFAE+I NIQLY +R ELSP A + + R++LA+ +RSR PY N+L
Sbjct: 44 MSFGGEAGDSVQFAEYIQANIQLYAIRENIELSPLAVSSFVRQELAKSIRSRKPYQVNVL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D ++ P+L+ IDYL +E+PY HGY G T S++ ++R
Sbjct: 104 IGGYDSKKQKPELYQIDYLGIKVELPYAAHGYSGFYTFSLLDHHYRPDMTTEEGLKLLKM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+ KR+ I+ V +V KDGI+ +
Sbjct: 164 CIKELDKRMPIDFKGVMVKIVDKDGIRQV 192
>gi|355714016|gb|AES04861.1| proteasome subunit, beta type, 2 [Mustela putorius furo]
Length = 154
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 69/81 (85%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TR+ LA+ LRSR+PY+ N+L
Sbjct: 71 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLL 130
Query: 61 IAGHDPEEGPQLFFIDYLASL 81
+AG+D EGP L+++DYLA+L
Sbjct: 131 LAGYDEHEGPALYYMDYLAAL 151
>gi|344300835|gb|EGW31156.1| hypothetical protein SPAPADRAFT_52324 [Spathaspora passalidarum
NRRL Y-27907]
Length = 196
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 91/150 (60%), Gaps = 18/150 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
+A TG++GDTVQFAE++ NIQLY MR N ELSP A A + R QLA +RSR PY N
Sbjct: 44 IAYTGEAGDTVQFAEYVQANIQLYSMRENDIELSPLATASFVRNQLATSIRSRKPYQVNC 103
Query: 60 LIAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV---------- 108
LIAG+D ++ P L +IDYL + +E+PY HGY G T S++ +++R ++
Sbjct: 104 LIAGYDTKKDQPTLNWIDYLGTQVELPYGAHGYAGFYTTSLLDKHYRKDMVVDDGLKLLK 163
Query: 109 ------QKRLIINVPNFKVTMVSKDGIKHL 132
+ R+ I+ V +V KDGI+ +
Sbjct: 164 LCLKELETRMPIDFKGVYVKVVDKDGIRSV 193
>gi|146422381|ref|XP_001487130.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
gi|152060493|sp|A5DB52.1|PSB4_PICGU RecName: Full=Probable proteasome subunit beta type-4
gi|146388251|gb|EDK36409.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 194
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 89/148 (60%), Gaps = 18/148 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
MA +G++GDTVQFAE+I N QLY MR N ELSP+A A + R QLA +RSR PY N+
Sbjct: 44 MAYSGEAGDTVQFAEYIQANTQLYTMRENDTELSPKATASFVRNQLATSIRSRKPYQVNV 103
Query: 60 LIAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR------------- 105
L+AG+D G P L +IDYL + +E+PY HGY G S++ ++++
Sbjct: 104 LLAGYDTNTGKPSLNWIDYLGTQVELPYAAHGYAGFYCTSLLDKHYKKGMNFEDGLDLLK 163
Query: 106 ---SEVQKRLIINVPNFKVTMVSKDGIK 130
E++ R+ I+ + +V K+GIK
Sbjct: 164 KCIKELETRMPIDFKGCYIKVVDKEGIK 191
>gi|328768529|gb|EGF78575.1| hypothetical protein BATDEDRAFT_30482 [Batrachochytrium
dendrobatidis JAM81]
Length = 194
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 94/149 (63%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G++GDTVQFAE+I N +L+ +R+G ELS A A +TR +LA LRSR+PY+ N+L
Sbjct: 44 MVYSGEAGDTVQFAEYIQCNSRLHSIRHGIELSTNAIASFTRMELATSLRSRNPYHVNVL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
IAG +P+ G P+L++IDY++++ ++ + HGY LS M Y
Sbjct: 104 IAGANPKTGAPELYWIDYISNMSKLKFAAHGYASYFCLSTMDRYWHENITQEEAIALLKK 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
+E++ R I N+P+F V +V K+GIK +
Sbjct: 164 CLAELRVRFIGNLPDFFVKIVDKNGIKEV 192
>gi|213410379|ref|XP_002175959.1| proteasome component C11 [Schizosaccharomyces japonicus yFS275]
gi|212004006|gb|EEB09666.1| proteasome component C11 [Schizosaccharomyces japonicus yFS275]
Length = 196
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G++GDT FAE+I N+ LY MRN L P A A +TRKQLA LRSR PY N+L
Sbjct: 44 MLYSGEAGDTTNFAEYIKANVALYTMRNDLVLGPDATASFTRKQLATSLRSRKPYQVNIL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+AG+D E+ P+L+++DYLAS + +PY +HGY +S Y+R
Sbjct: 104 LAGYDKGEKKPKLYWMDYLASCVPVPYASHGYAMFYCMSTFDRYYRPDLSLEDAIHVMKL 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
+E +KRL I+ F ++ ++GI+
Sbjct: 164 CFAEFKKRLPIDYKGFICKVIDENGIR 190
>gi|402082040|gb|EJT77185.1| proteasome subunit beta type-2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 203
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GDT+QFAE+I N +LY MRN +LSP A A++ R +LA LRSR PY N+L
Sbjct: 44 IAFSGEPGDTIQFAEYIQANAKLYSMRNETDLSPSALAHFVRGELASSLRSRKPYTVNLL 103
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G DP P L+++DYLA+L +PY HGY LSI+ ++H
Sbjct: 104 LGGVDPITHKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKILNM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V V+KDGI
Sbjct: 164 CTDELKRRLPIDFKGMVVKAVTKDGI 189
>gi|37720049|gb|AAN08876.1| putative proteasome subunit beta type 2 [Meyerozyma guilliermondii]
Length = 192
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 89/148 (60%), Gaps = 18/148 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
MA +G++GDTVQFAE+I N QLY MR N ELSP+A A + R QLA +RSR PY N+
Sbjct: 44 MAYSGEAGDTVQFAEYIQANTQLYTMRENDTELSPKATASFVRNQLATSIRSRKPYQVNV 103
Query: 60 LIAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR------------- 105
L+AG+D G P L +IDYL + +E+PY HGY G S++ ++++
Sbjct: 104 LLAGYDTNTGKPSLNWIDYLGTQVELPYAAHGYAGFYCTSLLDKHYKKGMNFEDGLDLLK 163
Query: 106 ---SEVQKRLIINVPNFKVTMVSKDGIK 130
E++ R+ I+ + +V K+GIK
Sbjct: 164 KCIKELETRMPIDFKGCYIKVVDKEGIK 191
>gi|402221532|gb|EJU01601.1| proteasome component Pre1 [Dacryopinax sp. DJM-731 SS1]
Length = 195
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 93/149 (62%), Gaps = 17/149 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA G+ GDT+QFAE++ +N++LY +R+ + L P +AA + R+ LA+ LRSR PY+ N++
Sbjct: 45 MAYGGEPGDTIQFAEYVERNLRLYHIRHNHTLRPASAAAWIRRSLADSLRSRHPYSVNLI 104
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D P L++IDYL +++E+P+ HGY L+ + +H
Sbjct: 105 LGGYDHTSSMPNLYWIDYLGTMVEVPFAAHGYGAYFALATLDRFHDPEATLEEGLETLKR 164
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
+EV+KRLII++ F V ++ ++G++ +
Sbjct: 165 CINEVEKRLIISLGKFMVKIIDRNGMREV 193
>gi|331221229|ref|XP_003323289.1| proteasome subunit beta type-2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 378
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 92/166 (55%), Gaps = 28/166 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDTVQFAE++ +N++LY +RN +L P AA +TR QLA LRSR+ Y+ N+L
Sbjct: 50 MAYSGEPGDTVQFAEYVERNLRLYGIRNHVDLLPHEAASWTRNQLASSLRSRNAYSVNLL 109
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D E P L++IDYL ++ ++PY HGY LS M +HR
Sbjct: 110 LGGFDTAEAVPLLYWIDYLGTMAQVPYAAHGYGAYFCLSTMDRFHRPDMDLQQGLELLKR 169
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEENKGIPE 149
E+ R I+N+ FK +++ ++PE + +P+
Sbjct: 170 CIDELSTRFIVNLGTFKRKLLA-----------ILDVPETSDSVPD 204
>gi|126132438|ref|XP_001382744.1| hypothetical protein PICST_55763 [Scheffersomyces stipitis CBS
6054]
gi|126094569|gb|ABN64715.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 194
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 89/150 (59%), Gaps = 18/150 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
+A TG+SGDTVQFAE++ NIQLY MR N ELSP+A A + R QLA +RSR PY N+
Sbjct: 44 VAYTGESGDTVQFAEYVQANIQLYSMRENDIELSPKATASFVRNQLATSIRSRKPYQVNV 103
Query: 60 LIAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR------------- 105
LI G+D + P L +IDYL + +E+PY HGY S++ ++++
Sbjct: 104 LIGGYDTKSNTPSLNWIDYLGTQVELPYGAHGYAAFYANSLLDKHYKKNMDVEQGLALLK 163
Query: 106 ---SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E++ R+ I+ V +V KDGI+ +
Sbjct: 164 MCLKELETRMPIDFKGVYVKVVDKDGIRSI 193
>gi|46124851|ref|XP_386979.1| hypothetical protein FG06803.1 [Gibberella zeae PH-1]
Length = 235
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G++GDTVQFAE+I +N QLY MRN +LSP A A++ R +LA LRSR PYN N+L
Sbjct: 49 LAFSGEAGDTVQFAEYIQRNAQLYSMRNESDLSPSALAHFVRGELATSLRSRKPYNVNLL 108
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYH 104
+ G DP G P L+++DYLASL E+PY HGY V I E H
Sbjct: 109 MGGVDPITGKPSLYWLDYLASLAEVPYAAHGYAQYVFPEIRLERH 153
>gi|403216121|emb|CCK70619.1| hypothetical protein KNAG_0E03620 [Kazachstania naganishii CBS
8797]
Length = 200
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 22/151 (14%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ +G++GDTVQFAE++ N+QLY MR G +LSP A A++ R +LA+ LRSR PY N+L
Sbjct: 44 MSYSGEAGDTVQFAEYVQANVQLYAMREGADLSPSAIAHFVRLELAKSLRSRKPYQVNVL 103
Query: 61 IAGHDPE------EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------- 105
+ G + P L+ IDYL +L+E+PY HGY T S++ ++R
Sbjct: 104 LGGASAQGSGTTASTPHLYQIDYLGTLVELPYAAHGYAAFYTFSLLDRHYREGMTREEGW 163
Query: 106 -------SEVQKRLIINVPNFKVTMVSKDGI 129
E+++R+ ++ V VS DG+
Sbjct: 164 ELLQLCVDELKRRIPMDFKGITVKTVSADGV 194
>gi|342878478|gb|EGU79815.1| hypothetical protein FOXB_09674 [Fusarium oxysporum Fo5176]
Length = 250
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 90/167 (53%), Gaps = 17/167 (10%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
T ++ VQFAE+I +N QLY MRN +LSP A++ R +LA LRSR PYN N+L+
Sbjct: 2 TTANAHSAVQFAEYIQRNAQLYSMRNESDLSPSGLAHFVRGELATSLRSRKPYNVNLLMG 61
Query: 63 GHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR---------------- 105
G DP G P L+++DYLASL ++PY HGY LSI+ ++H
Sbjct: 62 GVDPITGKPSLYWLDYLASLADVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKILTMCT 121
Query: 106 SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEENKGIPETEQ 152
E+++RL I+ V V DGI + K + + N I + Q
Sbjct: 122 DELKRRLPIDFKGMVVKAVKADGIVDIEFDDDKVVKKANTCIMKVSQ 168
>gi|453082164|gb|EMF10212.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
SO2202]
Length = 203
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 17/157 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA G++GDT+QFA+++ N LY +RNG EL+P A + R +LA+ LRSRSPY N+L
Sbjct: 44 MAFVGEAGDTIQFADYVQANTALYGIRNGNELTPNETASFVRSELAKSLRSRSPYTVNLL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G+D P L +IDYLAS +PY HGY L+I+ ++H
Sbjct: 104 LGGYDTHHNKPTLHWIDYLASCAPLPYAAHGYAQYYCLAILDKHHHPDISYEQGMKILRM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
E+++RL I+ V ++ KDG++ + +K +
Sbjct: 164 CTDELKRRLPIDFKGVLVKVIDKDGVREVDYDDSKQV 200
>gi|50546575|ref|XP_500757.1| YALI0B11374p [Yarrowia lipolytica]
gi|49646623|emb|CAG83004.1| YALI0B11374p [Yarrowia lipolytica CLIB122]
Length = 219
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 92/152 (60%), Gaps = 17/152 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA TG++GDTVQFAE+I N +LY +R+ ELSP A A +TR QLA+ LRSR PY N+L
Sbjct: 44 MAYTGEAGDTVQFAEYIMANTRLYGIRHDIELSPSAVASFTRNQLAKALRSRKPYQVNVL 103
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
IAG DP+ E P L IDYLAS +E+PY HGY T+S++ + +
Sbjct: 104 IAGFDPKTEKPTLNLIDYLASNVELPYAAHGYAAYYTMSLLDRHWKEGMTQEEGVVLMRM 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+Q RL ++ V +V KDGI+ + +
Sbjct: 164 CIKELQTRLPVDFKGVYVKVVDKDGIRDVSAL 195
>gi|281207380|gb|EFA81563.1| proteasome subunit beta type 2 [Polysphondylium pallidum PN500]
Length = 202
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 89/149 (59%), Gaps = 18/149 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ G+ GD QF EFIAKN++LY++RNGY LS A A++ R +LA LR R+PYN N+L
Sbjct: 44 LSSAGEPGDRTQFCEFIAKNLKLYQLRNGYSLSTSATAHFIRNELATALR-RNPYNVNLL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D + GP ++++DYLASL ++ + HGY L ++ H
Sbjct: 103 VAGYDEKTGPAVYYMDYLASLQKLDFGCHGYAAYFLLGLLDRLHHKDMSYEEGVELMHKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+Q R ++ + + +SKDGI+ +P
Sbjct: 163 CEELQTRFLVG-GKYTLKYISKDGIQVVP 190
>gi|400601001|gb|EJP68669.1| proteasome A-type and B-type [Beauveria bassiana ARSEF 2860]
Length = 226
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 88/158 (55%), Gaps = 29/158 (18%)
Query: 1 MAVTGDSGDT------------VQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEY 48
+A +G++GDT +QFAE+I +N QLY MRN +LSP A++ R +LA
Sbjct: 55 LAFSGEAGDTGKSSASNLSWRILQFAEYIQRNAQLYSMRNETDLSPSGLAHFVRGELASS 114
Query: 49 LRSRSPYNCNMLIAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-- 105
LRSR PYN N+L+ G DP G P L+++DYLA++ E+PY HGY LSI+ ++H
Sbjct: 115 LRSRKPYNVNLLMGGVDPITGKPSLYWMDYLAAMAEVPYAAHGYAQYYCLSILDKHHHPD 174
Query: 106 --------------SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V V DGI
Sbjct: 175 ITLGQGIKLLTLCTDELKRRLPIDFKGMVVKAVKADGI 212
>gi|116778950|gb|ABK21070.1| unknown [Picea sitchensis]
Length = 215
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ +G+SGD VQF E+I KN+ LY+ RNG LS A A +TR +LA LR ++PY+ N+L
Sbjct: 44 LGASGESGDRVQFTEYIQKNVHLYQFRNGIPLSTAATANFTRGELATALR-KNPYSVNLL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG D + GP L++IDY+A+L ++ + GY LS+M Y+
Sbjct: 103 LAGFDKDVGPSLYYIDYIATLHKVDKVAFGYGAYFALSMMDRYYHKGMSVEEAIEFADKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RLI+ PNF + +V KDG +
Sbjct: 163 ILEIRSRLIVAPPNFVIKIVDKDGAR 188
>gi|224107999|ref|XP_002314682.1| predicted protein [Populus trichocarpa]
gi|118489001|gb|ABK96308.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222863722|gb|EEF00853.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+SGD VQF E+I KN+ LY+ RNG L+ AAA +TR +LA LR ++PY N+L
Sbjct: 44 VAASGESGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALR-KNPYMVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D E GP L++IDY+A+L ++ GY LS+M ++ S
Sbjct: 103 LAGYDKETGPSLYYIDYIATLHKVDRGAFGYGSYFCLSMMDRHYHSGMSVEEAVELVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E+Q RL++ PNF + +V +DG +
Sbjct: 163 ITEIQSRLVVAPPNFVIKIVDRDGAR 188
>gi|50421075|ref|XP_459082.1| DEHA2D13904p [Debaryomyces hansenii CBS767]
gi|49654749|emb|CAG87250.1| DEHA2D13904p [Debaryomyces hansenii CBS767]
Length = 194
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 87/148 (58%), Gaps = 18/148 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
+A TG++GDTVQFAE+I NIQL+ MR N ELSP+A A + R QLA +RSR PY N+
Sbjct: 44 VAFTGEAGDTVQFAEYIQANIQLHTMRENDVELSPKATASFVRNQLATSIRSRKPYQVNV 103
Query: 60 LIAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR------------- 105
LI G+D + P L +IDYL + +E+PY HGY S++ ++R
Sbjct: 104 LIGGYDVNNDQPSLNWIDYLGTQVELPYAAHGYAAFYCTSLLDRHYRKDMKFDEGLKLLK 163
Query: 106 ---SEVQKRLIINVPNFKVTMVSKDGIK 130
E++ R+ I+ + +V K+GIK
Sbjct: 164 ECLKELETRMPIDFKGCYIKVVDKEGIK 191
>gi|302849887|ref|XP_002956472.1| hypothetical protein VOLCADRAFT_110015 [Volvox carteri f.
nagariensis]
gi|300258170|gb|EFJ42409.1| hypothetical protein VOLCADRAFT_110015 [Volvox carteri f.
nagariensis]
Length = 193
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 94/151 (62%), Gaps = 17/151 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GD V F+E+I N++LY +RNG EL+ ++ A YTR +LA LRS SPY+CN+L
Sbjct: 44 FCIAGEAGDRVNFSEYIIANVKLYALRNGTELNTKSVANYTRGELATALRS-SPYHCNLL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSI----------------MGEYH 104
+AG+D E GP L+++DYLA+L ++ GY T+S+ M +
Sbjct: 103 LAGYDKETGPALYWLDYLATLSKVNTGGTGYGSYFTMSLFDKMWNPELTVDEAVAMMDAG 162
Query: 105 RSEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
+EV+KRL++ P++ + ++ KDGI+ + +
Sbjct: 163 IAEVKKRLVVAPPHYIMKVIDKDGIRVVKTV 193
>gi|15228805|ref|NP_188902.1| proteasome subunit beta type-2-A [Arabidopsis thaliana]
gi|17380179|sp|O23714.1|PSB2A_ARATH RecName: Full=Proteasome subunit beta type-2-A; AltName: Full=20S
proteasome beta subunit D-1; AltName: Full=Proteasome
component GB; AltName: Full=Proteasome subunit beta
type-4
gi|2511590|emb|CAA74026.1| multicatalytic endopeptidase complex, proteasome component, beta
subunit [Arabidopsis thaliana]
gi|3421111|gb|AAC32070.1| 20S proteasome beta subunit PBD1 [Arabidopsis thaliana]
gi|11994294|dbj|BAB01477.1| multicatalytic endopeptidase complex, proteasome component, beta
subunit [Arabidopsis thaliana]
gi|15529250|gb|AAK97719.1| AT3g22630/F16J14_20 [Arabidopsis thaliana]
gi|23505793|gb|AAN28756.1| At3g22630/F16J14_20 [Arabidopsis thaliana]
gi|332643138|gb|AEE76659.1| proteasome subunit beta type-2-A [Arabidopsis thaliana]
Length = 204
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GD VQF E++ KN+ LYK RNG L+ AAA +TR +LA LR ++PY+ N+L
Sbjct: 44 VAASGEPGDRVQFTEYVQKNVSLYKFRNGIPLTTAAAANFTRGELATALR-KNPYSVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D E G L++IDY+A+L ++ GY +LS M ++RS
Sbjct: 103 MAGYDDESGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ PNF + +V KDG +
Sbjct: 163 ILEIRSRLVVAPPNFVIKIVDKDGAR 188
>gi|351726646|ref|NP_001235342.1| uncharacterized protein LOC100499738 [Glycine max]
gi|255626205|gb|ACU13447.1| unknown [Glycine max]
Length = 204
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 91/146 (62%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GD VQF E+I KN+ LY+ RNG L+ AAA +TR +LA LR ++PY+ N+L
Sbjct: 44 IAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALR-KNPYSVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D E GP+L++IDY+A+L ++ GY +LS+M ++ S
Sbjct: 103 LAGYDKETGPELYYIDYIATLHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAIDLVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ PNF + +V KDG +
Sbjct: 163 IMEIRSRLVVAPPNFVIKIVDKDGAR 188
>gi|326437164|gb|EGD82734.1| hypothetical protein PTSG_03383 [Salpingoeca sp. ATCC 50818]
Length = 196
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 84/148 (56%), Gaps = 16/148 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G GD F ++I N++L + NG+E S A A Y RK +A+ LRSR Y N L
Sbjct: 44 MLLAGPVGDCSNFGDYIQANLKLQALTNGFEASTHATANYVRKNIADALRSRGAYQVNSL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
IAG D ++GP L+++DYL +++++PY HGY T + + ++R
Sbjct: 104 IAGVDEQDGPSLYYLDYLGTMVKVPYGAHGYGSFFTFATLDHHYREGMSLEEATDVLKKC 163
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHL 132
E++ R ++N+ +FKV +V DGI+ +
Sbjct: 164 FLEIKTRFLMNLDSFKVRVVDADGIREV 191
>gi|351721168|ref|NP_001238480.1| uncharacterized protein LOC100306158 [Glycine max]
gi|255627727|gb|ACU14208.1| unknown [Glycine max]
Length = 204
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 91/146 (62%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GD VQF E+I KN+ LY+ RNG L+ AAA +TR +LA LR ++PY+ N+L
Sbjct: 44 IAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALR-KNPYSVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D E GP+L++IDY+A+L ++ GY +LS+M ++ S
Sbjct: 103 LAGYDKETGPELYYIDYIATLHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAVDLVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ PNF + +V KDG +
Sbjct: 163 IMEIRSRLVVAPPNFVIKIVDKDGAR 188
>gi|15233580|ref|NP_193216.1| proteasome subunit beta type-2-B [Arabidopsis thaliana]
gi|17380180|sp|O24633.1|PSB2B_ARATH RecName: Full=Proteasome subunit beta type-2-B; AltName: Full=20S
proteasome beta subunit D-2; AltName: Full=Proteasome
component GA; AltName: Full=Proteasome subunit beta
type-4
gi|2244837|emb|CAB10259.1| proteasome chain protein [Arabidopsis thaliana]
gi|2511572|emb|CAA73618.1| multicatalytic endopeptidase [Arabidopsis thaliana]
gi|3421114|gb|AAC32071.1| 20S proteasome beta subunit PBD2 [Arabidopsis thaliana]
gi|7268226|emb|CAB78522.1| proteasome chain protein [Arabidopsis thaliana]
gi|21592467|gb|AAM64418.1| proteasome chain protein [Arabidopsis thaliana]
gi|88193794|gb|ABD42986.1| At4g14800 [Arabidopsis thaliana]
gi|110735665|dbj|BAE99813.1| proteasome chain protein [Arabidopsis thaliana]
gi|332658100|gb|AEE83500.1| proteasome subunit beta type-2-B [Arabidopsis thaliana]
Length = 199
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GD VQF E++ KN+ LY+ RNG LS AAA +TR +LA LR ++PY+ N+L
Sbjct: 44 VAASGEPGDRVQFTEYVQKNVSLYQFRNGIPLSTAAAANFTRGELATALR-KNPYSVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D E G L++IDY+A+L ++ GY +LS M ++RS
Sbjct: 103 MAGYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL+I PNF + +V KDG +
Sbjct: 163 ILEIRSRLVIAPPNFVIKIVDKDGAR 188
>gi|297835264|ref|XP_002885514.1| hypothetical protein ARALYDRAFT_898737 [Arabidopsis lyrata subsp.
lyrata]
gi|297331354|gb|EFH61773.1| hypothetical protein ARALYDRAFT_898737 [Arabidopsis lyrata subsp.
lyrata]
Length = 204
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GD VQF E++ KN+ LYK RNG L+ AAA +TR +LA LR ++PY+ N+L
Sbjct: 44 VAASGEPGDRVQFTEYVQKNVSLYKFRNGIPLTTAAAANFTRGELATALR-KNPYSVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D E G L++IDY+A+L ++ GY +LS M ++RS
Sbjct: 103 MAGYDNESGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ PNF + +V KDG +
Sbjct: 163 ILEIRSRLVVAPPNFVIKIVDKDGAR 188
>gi|344229512|gb|EGV61397.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
Length = 194
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 18/151 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
+A TG+SGDTVQFAE++ NIQLY MR N ELSP+A A + R QLA +RSR PY N+
Sbjct: 44 VAFTGESGDTVQFAEYMQANIQLYSMRENDIELSPKATASFVRSQLATSIRSRKPYQVNV 103
Query: 60 LIAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------ 106
L+ G D + P L +IDYL + +PY HGY +S++ +++R+
Sbjct: 104 LLGGFDTKSNEPTLNYIDYLGTQAVLPYAAHGYAAFYCMSLLDKHYRTNMTLDDGLKLLD 163
Query: 107 ----EVQKRLIINVPNFKVTMVSKDGIKHLP 133
E++ R+ ++ V +V KDG++ +
Sbjct: 164 MCIRELETRMPMDFKGCYVKVVDKDGVREIS 194
>gi|328871197|gb|EGG19568.1| proteasome subunit beta type 2 [Dictyostelium fasciculatum]
Length = 159
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 87/147 (59%), Gaps = 18/147 (12%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G+ GD QF EF++KN +LY +RNGY LS A A +TR +LA LRSR PYN N++IAG+
Sbjct: 14 GEHGDRSQFIEFVSKNCKLYNLRNGYALSTAATANFTRSELATALRSR-PYNVNLIIAGY 72
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----------------SEV 108
D E ++++DYLAS++++ + HGY L ++ +H+ E+
Sbjct: 73 DKEHEGSIYYMDYLASMVKLDFACHGYAAYFLLGLLDRHHKKDMSFEEGMALLKMCTQEL 132
Query: 109 QKRLIINVPNFKVTMVSKDGIKHLPPI 135
+ R ++ F + +++DG+K +P I
Sbjct: 133 KTRFLVG-GKFMIKHINQDGVKQIPFI 158
>gi|357482027|ref|XP_003611299.1| Proteasome subunit beta type [Medicago truncatula]
gi|217071348|gb|ACJ84034.1| unknown [Medicago truncatula]
gi|355512634|gb|AES94257.1| Proteasome subunit beta type [Medicago truncatula]
gi|388503658|gb|AFK39895.1| unknown [Medicago truncatula]
gi|388515713|gb|AFK45918.1| unknown [Medicago truncatula]
Length = 204
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GD VQF E+I KN+ LY+ RNG L+ AAA +TR +LA LR ++PY+ N+L
Sbjct: 44 VAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALR-KNPYSVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D E GP L++IDY+A+L ++ GY +LS+M ++ S
Sbjct: 103 LAGYDKETGPSLYYIDYIATLHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAIDLVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ PNF + +V KDG +
Sbjct: 163 IAEIRSRLVVAPPNFVIKIVDKDGAR 188
>gi|255552111|ref|XP_002517100.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223543735|gb|EEF45263.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 202
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GD VQF E+I KN+ LY+ RNG LS AAA +TR +LA LR ++PY+ N+L
Sbjct: 44 IAASGEPGDRVQFTEYIQKNVSLYQFRNGIPLSTAAAANFTRGELATALR-KNPYSVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D E GP L++IDY+A+L ++ GY +L++M + S
Sbjct: 103 LAGYDKETGPSLYYIDYIATLHKVDKGAFGYGSYFSLAMMDRHFHSGMSVEEAIDLVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ PNF + +V KDG +
Sbjct: 163 ILEIRSRLVVAPPNFVIKIVDKDGAR 188
>gi|388513771|gb|AFK44947.1| unknown [Medicago truncatula]
Length = 203
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GD VQF E+I KN+ LY+ RNG L+ AAA +TR +LA LR ++PY+ N+L
Sbjct: 44 IAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTTAAANFTRGELATALR-KNPYSVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D E GP L++IDY+A+L ++ GY +LS+M + S
Sbjct: 103 LAGYDKETGPSLYYIDYIATLHKLEKGAFGYGSYFSLSMMDRHFHSGMNVEEAIDLVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ PNF + +V KDG +
Sbjct: 163 ILEIRSRLVVAPPNFVIKIVDKDGAR 188
>gi|346325319|gb|EGX94916.1| proteasome component C11 [Cordyceps militaris CM01]
Length = 299
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 17/136 (12%)
Query: 11 VQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEG- 69
VQFAE+I +N QLY MRN +LSP A++ R +LA LRSR PYN N+L+ G DP G
Sbjct: 81 VQFAEYIQRNAQLYSMRNETDLSPSGLAHFVRGELASSLRSRKPYNVNLLMGGVDPITGK 140
Query: 70 PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----------------SEVQKRLI 113
P L+++DYLA++ E+PY HGY LSI+ ++H E+++RL
Sbjct: 141 PSLYWMDYLAAMAEVPYAAHGYAQYYCLSILDKHHHPDITLGQGIKLLTLCTDELKRRLP 200
Query: 114 INVPNFKVTMVSKDGI 129
I+ V V DGI
Sbjct: 201 IDFKGMIVKAVKADGI 216
>gi|224112951|ref|XP_002332670.1| predicted protein [Populus trichocarpa]
gi|118483095|gb|ABK93457.1| unknown [Populus trichocarpa]
gi|222836464|gb|EEE74871.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+SGD VQF E+I KN+ LY RNG L+ AAA +TR +LA LR ++PY N+L
Sbjct: 44 IAASGESGDRVQFTEYIQKNVALYHFRNGIPLTTAAAANFTRGELATALR-KNPYMVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG D E GP L++IDY+A+L ++ GY LS+M ++ S
Sbjct: 103 LAGFDRETGPSLYYIDYIATLHKVDKGAFGYGSFFCLSMMDRHYHSGMSVEEAVELVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ PNF + +V +DG +
Sbjct: 163 IMEIRSRLVVAPPNFVIKIVDRDGAR 188
>gi|357480975|ref|XP_003610773.1| Proteasome subunit beta type [Medicago truncatula]
gi|355512108|gb|AES93731.1| Proteasome subunit beta type [Medicago truncatula]
Length = 203
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GD VQF E+I KN+ LY+ RNG L+ AAA +TR +LA LR ++PY+ N+L
Sbjct: 44 IAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALR-KNPYSVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D E GP L++IDY+A+L ++ GY +LS+M + S
Sbjct: 103 LAGYDKETGPSLYYIDYIATLHKLEKGAFGYGSYFSLSMMDRHFHSGMNVEEAIDLVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ PNF + +V KDG +
Sbjct: 163 ILEIRSRLVVAPPNFVIKIVDKDGAR 188
>gi|385304709|gb|EIF48717.1| proteasome component c11 [Dekkera bruxellensis AWRI1499]
Length = 185
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 83/145 (57%), Gaps = 16/145 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A TG SGDT QFA++I N+QLY MR G +L+ + A Y R +LA LRSRSPY N+L
Sbjct: 35 LAYTGTSGDTTQFADYIQGNMQLYSMREGVDLNSKGIASYIRHELATSLRSRSPYQVNIL 94
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG D + P L IDY+ + +++PY HGY +S+ ++R
Sbjct: 95 LAGLDKGDAPFLSNIDYMGTRVDLPYAAHGYAAFYVMSLFDRHYRPDMTLKDGMKLLKMC 154
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGI 129
+E+ +R + F+V +V K+GI
Sbjct: 155 KAELDERFPVVFKGFQVKVVDKEGI 179
>gi|412985192|emb|CCO20217.1| predicted protein [Bathycoccus prasinos]
Length = 221
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 91/152 (59%), Gaps = 17/152 (11%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
A++G GD F EF+ N+ LY+++NG LS AAA++TR +LA+ LRS PY N L
Sbjct: 45 ALSGPKGDVSNFGEFVKCNLNLYRLKNGRSLSTSAAAHWTRNELAKALRS-GPYQVNGLF 103
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYH----------------R 105
AG+D + GP+L+F+DYLA++ ++ HGY G+ +LS+ ++
Sbjct: 104 AGYDDQSGPELYFLDYLATMHKVNSSGHGYGGMFSLSLFDKHWVPNMSRAQSLELVKKCV 163
Query: 106 SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKA 137
+E+Q+RL++ F + +VS+ G++ + + A
Sbjct: 164 AEIQERLVVAPEKFLIKIVSEKGVEQMTMVTA 195
>gi|440798163|gb|ELR19231.1| proteasome subunit beta type2, putative [Acanthamoeba castellanii
str. Neff]
Length = 207
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 18/159 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G GD V F E++ +N++LYK RN L A A + R +LA+ LRS SPY N+L
Sbjct: 45 LGAVGPVGDRVHFTEYVQRNLKLYKFRNNLTLGTHATANFVRGELADALRS-SPYQVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G D EEGP L+F+DYLAS+ ++ Y HGY LSI+ +Y++
Sbjct: 104 LGGVD-EEGPALYFLDYLASMDKLEYAAHGYCAYFCLSILDKYYKKDLTLEQGIDIIEKC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEE 143
+E++ R IIN P+F + +V K+G + + + + + +E
Sbjct: 163 ITELRARFIINSPDFVIKVVDKNGTRVVRGLGSTDESKE 201
>gi|195386816|ref|XP_002052100.1| GJ17367 [Drosophila virilis]
gi|194148557|gb|EDW64255.1| GJ17367 [Drosophila virilis]
Length = 231
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 84/150 (56%), Gaps = 16/150 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MAV G++GDT+ FA+FIA NI LY++RNGY++ ++TR + + +R++ ML
Sbjct: 44 MAVVGNNGDTLHFADFIATNISLYEIRNGYDMDTPTVVHFTRNHILDNIRNKVSSQVAML 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D E GP L FID + + + Y HG + SI +
Sbjct: 104 LAGYDSEFGPSLCFIDAQGTTMPLNYSGHGLGHPICTSIFHMMWKPDLTFQEGVDIVRRC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPP 134
E+Q RL+IN+ NF V +V KDG++ LPP
Sbjct: 164 VVEIQNRLVINLRNFDVFVVDKDGVRKLPP 193
>gi|159481799|ref|XP_001698962.1| 20S proteasome beta subunit D, type 2 [Chlamydomonas reinhardtii]
gi|158273225|gb|EDO99016.1| 20S proteasome beta subunit D, type 2 [Chlamydomonas reinhardtii]
Length = 193
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 17/151 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G++GD V F+E+I N++LY +RNG L+ ++ A YTR +LA LRS SPY+CN+L
Sbjct: 44 FCIAGEAGDRVNFSEYIIANVKLYALRNGTPLNTKSVANYTRGELATALRS-SPYHCNLL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSI----------------MGEYH 104
+AG D + G L+++DYLA+L +I GY TLS+ M E
Sbjct: 103 LAGWDEQAGASLYWMDYLATLNKINTGGTGYGSYFTLSLFDKMWHPNLTVDEATAMMEAG 162
Query: 105 RSEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
+EV+KRL++ P++ + +V KDGI+ + +
Sbjct: 163 IAEVKKRLVVAPPHYIIKVVDKDGIRTIKTV 193
>gi|449513412|ref|XP_004164319.1| PREDICTED: proteasome subunit beta type-2-A-like isoform 1 [Cucumis
sativus]
gi|449513415|ref|XP_004164320.1| PREDICTED: proteasome subunit beta type-2-A-like isoform 2 [Cucumis
sativus]
Length = 205
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 91/148 (61%), Gaps = 17/148 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GD VQF E+I KN+ LY+ RNG L+ AAA +TR +LA LR ++PY+ N+L
Sbjct: 44 VAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRSELATALR-KNPYSVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D E GP L+++DY+A+L ++ GY +L++M ++ S
Sbjct: 103 LAGYDKETGPSLYYVDYIATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEEEAIDLVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHL 132
E++ RL++ PNF + +V K+G + +
Sbjct: 163 ILEIRSRLVVAPPNFVIKIVDKNGAREV 190
>gi|297804794|ref|XP_002870281.1| hypothetical protein ARALYDRAFT_493416 [Arabidopsis lyrata subsp.
lyrata]
gi|297316117|gb|EFH46540.1| hypothetical protein ARALYDRAFT_493416 [Arabidopsis lyrata subsp.
lyrata]
Length = 199
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GD VQF E++ KN+ LY+ RNG L+ AAA +TR +LA LR ++PY+ N+L
Sbjct: 44 VAASGEPGDRVQFTEYVQKNVSLYQFRNGLPLTTAAAANFTRGELATALR-KNPYSVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D E G L++IDY+A+L ++ GY +LS M ++RS
Sbjct: 103 MAGYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL+I PNF + +V K+G +
Sbjct: 163 ILEIRSRLVIAPPNFVIKIVDKNGAR 188
>gi|448079193|ref|XP_004194334.1| Piso0_004821 [Millerozyma farinosa CBS 7064]
gi|359375756|emb|CCE86338.1| Piso0_004821 [Millerozyma farinosa CBS 7064]
Length = 196
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 18/148 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
+A TG++GDTV FAE+I NIQLY MR N ELSP+A A + R QLA +RSR PY N+
Sbjct: 44 IAYTGEAGDTVNFAEYIQANIQLYSMRENDIELSPKATASFIRNQLATSIRSRKPYQVNV 103
Query: 60 LIAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR------------- 105
L+ G+D P L +IDYL + +E+PY HGY S+ +++
Sbjct: 104 LLGGYDVASNTPTLNWIDYLGTQVELPYAAHGYAAFYCTSLFDRHYKKGMTVDEGLELLK 163
Query: 106 ---SEVQKRLIINVPNFKVTMVSKDGIK 130
E++ R+ ++ + V ++ KDG++
Sbjct: 164 MSLKELEIRMPLDFKGYYVKIIDKDGVR 191
>gi|167517217|ref|XP_001742949.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778048|gb|EDQ91663.1| predicted protein [Monosiga brevicollis MX1]
Length = 193
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 82/144 (56%), Gaps = 16/144 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G G F + +AKNI+L +RNGY+ SP A + RK LA+ LR+R Y N+L
Sbjct: 44 MLLAGSVGACSNFGDLMAKNIKLNGIRNGYDHSPAECANFVRKSLADALRTREAYQVNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G+D +GP+L++IDY ++ ++P+ HGY TL+ + +++
Sbjct: 104 LGGYDAHDGPELYYIDYFGAMAKVPFGAHGYGSFFTLATLDRHYKEGMNFEEAKDVMRKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDG 128
EV+ R I+N+P F V ++ ++G
Sbjct: 164 IEEVRTRFIVNMPAFTVRVIDREG 187
>gi|449433303|ref|XP_004134437.1| PREDICTED: vicilin-like antimicrobial peptides 2-1-like [Cucumis
sativus]
Length = 863
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 91/148 (61%), Gaps = 17/148 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G+ GD VQF E+I KN+ LY+ RNG L+ AAA +TR +LA LR ++PY+ N+L
Sbjct: 702 VAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRSELATALR-KNPYSVNIL 760
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D E GP L+++DY+A+L ++ GY +L++M ++ S
Sbjct: 761 LAGYDKETGPSLYYVDYIATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEEEAIDLVDKC 820
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHL 132
E++ RL++ PNF + +V K+G + +
Sbjct: 821 ILEIRSRLVVAPPNFVIKIVDKNGAREV 848
>gi|330795438|ref|XP_003285780.1| hypothetical protein DICPUDRAFT_46345 [Dictyostelium purpureum]
gi|325084244|gb|EGC37676.1| hypothetical protein DICPUDRAFT_46345 [Dictyostelium purpureum]
Length = 193
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 87/149 (58%), Gaps = 18/149 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ G++GD VQF E+I+KNI+LY +RNGY LS A+A + R +LA +RS PY N++
Sbjct: 44 LSAAGEAGDRVQFTEYISKNIKLYSLRNGYSLSTPASANFIRNELATSIRSH-PYQINLI 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D E GP L+++DYL SL ++ + HGY L ++ +H
Sbjct: 103 LAGYDKETGPSLYYMDYLGSLQKLTFACHGYSSYFLLGLLDRHHNVNLTLDEGIALMKLC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E+ R +++ + + VS DGIK +P
Sbjct: 163 TKELNTRFLVS-GKYILKFVSADGIKVIP 190
>gi|320582204|gb|EFW96422.1| proteasome subunit [Ogataea parapolymorpha DL-1]
Length = 194
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A TG+SGDT QFA++I NIQL+ MR EL+ +A A + R+QLA +RSR+PY +L
Sbjct: 44 LAFTGESGDTTQFADYIQANIQLFTMRENTELNSKAIASFVRQQLATSIRSRTPYQVQVL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G P L IDYL + +++PY HGY T+S++ ++R
Sbjct: 104 LGGLHNGSEPFLSLIDYLGTRVDLPYCAHGYAAFYTMSLLDHHYRPDMALDEGLKLLKLC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+ KR+ I V ++ KDGI+ +
Sbjct: 164 HQELVKRMPIEFKGLYVKVIDKDGIRDI 191
>gi|426328917|ref|XP_004025493.1| PREDICTED: proteasome subunit beta type-2 isoform 4 [Gorilla
gorilla gorilla]
Length = 160
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 83/128 (64%), Gaps = 16/128 (12%)
Query: 25 KMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFFIDYLASLIEI 84
+M++GYELSP AAA +TR+ LA+ LRSR+PY+ N+L+AG+D EGP L+++DYLA+L +
Sbjct: 27 QMKDGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKA 86
Query: 85 PYITHGYPGIVTLSIMGEYHR----------------SEVQKRLIINVPNFKVTMVSKDG 128
P+ HGY +TLSI+ Y+ E+QKR I+N+P F V ++ K+G
Sbjct: 87 PFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRIIDKNG 146
Query: 129 IKHLPPIK 136
I L I
Sbjct: 147 IHDLDNIS 154
>gi|346470417|gb|AEO35053.1| hypothetical protein [Amblyomma maculatum]
Length = 200
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ +G+ GD VQF E+I KN+ LY+ RNG L+ AAA +TR +LA LR ++PY N+L
Sbjct: 44 LGASGEGGDRVQFTEYIQKNVHLYQFRNGIPLTTAAAANFTRNELATALR-KNPYQVNVL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D + GP L++IDY+A+L +I GY +L++M ++ +
Sbjct: 103 LAGYDKDIGPSLYYIDYIATLHKIDKGAFGYGSYFSLAMMDRHYHNGMSLEEAVDLADKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKH 131
E++ RL++ PNF + +V KDG +
Sbjct: 163 IMEIRSRLVVAPPNFVIKIVDKDGARQ 189
>gi|359479647|ref|XP_003632316.1| PREDICTED: proteasome subunit beta type-2-A-like [Vitis vinifera]
gi|147843860|emb|CAN79443.1| hypothetical protein VITISV_006154 [Vitis vinifera]
Length = 205
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ +G+ GD QF E+I KN+ LY+ RNG L+ AAA +TR +LA LR ++PY N+L
Sbjct: 44 LGASGEGGDRAQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALR-KNPYAVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D + GP L++IDY+ASL +I GY +L++M ++ S
Sbjct: 103 LAGYDKDIGPSLYYIDYIASLHKIEKGAFGYGSYFSLAMMDRHYHSGMTVEEAVDLVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ PNF + +V KDG +
Sbjct: 163 IMEIRSRLVVAPPNFVIKIVDKDGAR 188
>gi|296085223|emb|CBI28718.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ +G+ GD QF E+I KN+ LY+ RNG L+ AAA +TR +LA LR ++PY N+L
Sbjct: 9 LGASGEGGDRAQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALR-KNPYAVNIL 67
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D + GP L++IDY+ASL +I GY +L++M ++ S
Sbjct: 68 LAGYDKDIGPSLYYIDYIASLHKIEKGAFGYGSYFSLAMMDRHYHSGMTVEEAVDLVDKC 127
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ PNF + +V KDG +
Sbjct: 128 IMEIRSRLVVAPPNFVIKIVDKDGAR 153
>gi|444725425|gb|ELW65990.1| hypothetical protein TREES_T100000558 [Tupaia chinensis]
Length = 551
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 57/129 (44%), Positives = 84/129 (65%), Gaps = 16/129 (12%)
Query: 23 LYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFFIDYLASLI 82
+ +M++GYELSP AAA +TR+ LA+ LRSR+PY+ N+L+AG+D EGP L+++DYLA+L
Sbjct: 416 IVQMKDGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALA 475
Query: 83 EIPYITHGYPGIVTLSIMGEYHR----------------SEVQKRLIINVPNFKVTMVSK 126
+ P+ HGY +TLSI+ Y+ E+QKR I+N+P F V ++ K
Sbjct: 476 KAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRIIDK 535
Query: 127 DGIKHLPPI 135
+GI L I
Sbjct: 536 NGIHDLDNI 544
>gi|448083751|ref|XP_004195434.1| Piso0_004821 [Millerozyma farinosa CBS 7064]
gi|359376856|emb|CCE85239.1| Piso0_004821 [Millerozyma farinosa CBS 7064]
Length = 196
Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 18/148 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
+A TG++GDTV FAE+I NIQLY MR N ELSP+A A + R QLA +RSR PY N+
Sbjct: 44 IAYTGEAGDTVNFAEYIQANIQLYSMRENDIELSPKATASFVRNQLATSIRSRKPYQVNV 103
Query: 60 LIAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQK-------- 110
LI G+D P L +IDYL + +E+PY HGY S+ +++ +
Sbjct: 104 LIGGYDVASNTPTLNWIDYLGTQVELPYAAHGYAAFYCTSLFDRHYKKGMTVEEGLELLK 163
Query: 111 --------RLIINVPNFKVTMVSKDGIK 130
R+ ++ + V ++ KDGI+
Sbjct: 164 LSLKELEIRMPLDFKGYYVKVIDKDGIR 191
>gi|156083220|ref|XP_001609094.1| proteasome beta 2 subunit [Babesia bovis T2Bo]
gi|154796344|gb|EDO05526.1| proteasome beta 2 subunit, putative [Babesia bovis]
Length = 218
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 19/158 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G GD QF++ I + +K +N ELS AAA++ R +LAEYLR +SPY +ML
Sbjct: 46 MMLAGPLGDRSQFSKMIKATLDYHKYKNSKELSTNAAAHFVRLELAEYLR-QSPYQVDML 104
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMG-EYH--------------- 104
IAG D ++GP+LF+IDYLAS + HGY G + ++ EY
Sbjct: 105 IAGID-QDGPKLFWIDYLASCTQADTAVHGYGGFLLRGLLDKEYKPNMTREEAIALLKKC 163
Query: 105 RSEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPE 142
R EVQ R +I+ NF ++ KDG+ H IK ++PE
Sbjct: 164 RHEVQNRFLISQSNFAAKIIDKDGV-HDVDIKDDDVPE 200
>gi|194854881|ref|XP_001968440.1| GG24868 [Drosophila erecta]
gi|190660307|gb|EDV57499.1| GG24868 [Drosophila erecta]
Length = 215
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 16/159 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ GD GD +QF++FI +N+ LYK+ NGY+L+ R A ++ R L+ YLRS Y +L
Sbjct: 44 MSTIGDCGDCLQFSDFILRNMDLYKVTNGYDLTVRGAVHFIRSNLSAYLRSNMKYQVALL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+ G D GP+L +ID + I I Y HG I E++R+
Sbjct: 104 VGGFDLNTGPELHYIDQYGNSIPIRYGGHGAGINFCTPIFEEFYRTHMNTQAAYDVIKKC 163
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEE 143
E+ KR +IN+ NF V ++ K+GI + P+ +++ +
Sbjct: 164 VIELYKRFVINLRNFDVFLIGKEGITKMAPMNQESLRAD 202
>gi|170585040|ref|XP_001897296.1| proteasome subunit beta type 2 [Brugia malayi]
gi|158595293|gb|EDP33858.1| proteasome subunit beta type 2, putative [Brugia malayi]
Length = 202
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 89/154 (57%), Gaps = 18/154 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M G+ GD QF ++ +NIQLYK+R GYE+SPR++ ++ R+ +AE LR++ Y + L
Sbjct: 48 MICIGEDGDVAQFGDWCKRNIQLYKLRYGYEMSPRSSHHWIRRSIAEALRTQDYYVVDTL 107
Query: 61 IAGHDPEEGPQLF-FIDYLAS-LIEIPYITHGYPGIVTLSIMGEYHRS------------ 106
I G+D E +DYL + +I+ PYI G+ G + SI+ + +RS
Sbjct: 108 IGGYDSIENKAFLGSVDYLGNGIIDQPYIFRGFSGRLCYSILDKTYRSDMSEEDGIGLLK 167
Query: 107 ----EVQKRLIINVPNFKVTMVSKDGIKHLPPIK 136
E ++R I+N+P F+V ++ K+G + L IK
Sbjct: 168 KCLHESKRRFIVNLPAFEVMVIDKNGTRQLEDIK 201
>gi|302757719|ref|XP_002962283.1| hypothetical protein SELMODRAFT_165201 [Selaginella moellendorffii]
gi|302763553|ref|XP_002965198.1| hypothetical protein SELMODRAFT_406410 [Selaginella moellendorffii]
gi|300167431|gb|EFJ34036.1| hypothetical protein SELMODRAFT_406410 [Selaginella moellendorffii]
gi|300170942|gb|EFJ37543.1| hypothetical protein SELMODRAFT_165201 [Selaginella moellendorffii]
Length = 220
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 88/148 (59%), Gaps = 17/148 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GD V F+E+I KNI LY RNG LS AAA +TR +LA LR ++PY N++
Sbjct: 44 MATSGEAGDRVIFSEYIQKNINLYNFRNGIPLSTAAAASFTRNELAVALR-KNPYYVNLM 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G D +GP L+F+DY+A+L ++ GY LS+M +Y R
Sbjct: 103 LGGFDKGKGPSLYFMDYIATLHQLEKGAVGYGSYFVLSVMDKYFRKGMSVEEGMALADKC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHL 132
+E++KRLI + +F + +V KDG + L
Sbjct: 163 IAEIRKRLIASPHSFVLKIVDKDGARDL 190
>gi|195470819|ref|XP_002087704.1| GE18166 [Drosophila yakuba]
gi|194173805|gb|EDW87416.1| GE18166 [Drosophila yakuba]
Length = 215
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 16/159 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ GD GD +QF++FI +N+ LYK+ NGY+L+ R A ++ R L+ YLR Y +L
Sbjct: 44 MSTIGDGGDCLQFSDFILRNMDLYKVTNGYDLTVRGAVHFIRSNLSAYLRCNMKYQVALL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+ G D GP+L +ID + + I Y HG I E++ S
Sbjct: 104 VGGFDSTTGPELHYIDQFGNSVPIRYGGHGAGINFCTPIFEEFYTSHMDSQAAYDVIKKC 163
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEE 143
E+ KR +IN+ NF + ++SK+GI + PI +++ +
Sbjct: 164 VIELYKRFVINLRNFDLFLISKEGITKMTPINQESLRAD 202
>gi|401399130|ref|XP_003880481.1| proteasome (Prosome, macropain) subunit, beta type, 1, related
[Neospora caninum Liverpool]
gi|325114891|emb|CBZ50448.1| proteasome (Prosome, macropain) subunit, beta type, 1, related
[Neospora caninum Liverpool]
Length = 191
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 87/149 (58%), Gaps = 18/149 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G GD +QF ++I KNI LY+ RN +LS A A +TR+QLA YLR RSPY+ +++
Sbjct: 44 MGLAGQIGDRLQFGDYIQKNIHLYRFRNNKKLSCAATASFTRQQLAYYLR-RSPYHVDVM 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYH---------------- 104
+AG+D E GP L+++DYLAS+ + HGY ++ Y+
Sbjct: 103 LAGYD-EMGPHLYWMDYLASMASVNKGAHGYAAYFLGGLLDRYYHPELTEEEALKIIEMC 161
Query: 105 RSEVQKRLIINVPNFKVTMVSKDGIKHLP 133
+ E+ R +I+ +F+V + +KDGI+ L
Sbjct: 162 KKELMTRFVISQASFRVKIATKDGIRTLD 190
>gi|237840493|ref|XP_002369544.1| proteasome subunit beta type 2, putative [Toxoplasma gondii ME49]
gi|211967208|gb|EEB02404.1| proteasome subunit beta type 2, putative [Toxoplasma gondii ME49]
gi|221483239|gb|EEE21563.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
gi|221504161|gb|EEE29838.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 191
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 87/149 (58%), Gaps = 18/149 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M G GD +QF ++I KNI LY+ RN +L AAA +TR+QLA YLR RSPY+ +++
Sbjct: 44 MGFAGQIGDRLQFGDYIQKNIHLYRFRNNKKLGCAAAANFTRQQLAYYLR-RSPYHVDVM 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYH---------------- 104
+AG+D E GP L+++DYLAS++ + HGY ++ Y+
Sbjct: 103 LAGYD-EMGPHLYWMDYLASMVSVNKAAHGYAAYFLGGLLDRYYHPELTEEEALKIIEMC 161
Query: 105 RSEVQKRLIINVPNFKVTMVSKDGIKHLP 133
+ E+ R I++ +F+V + +K+GI+ L
Sbjct: 162 KKELMTRFIVSQASFRVKVATKEGIRTLD 190
>gi|339236579|ref|XP_003379844.1| proteasome subunit beta type-2 [Trichinella spiralis]
gi|316977428|gb|EFV60530.1| proteasome subunit beta type-2 [Trichinella spiralis]
Length = 227
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 81/137 (59%), Gaps = 2/137 (1%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M V GD G+ F E+I +N+ LY R+G++LSP+ A + RK + + LR+ +P+ NM+
Sbjct: 89 MVVVGDGGEADVFGEYIERNMHLYNFRHGFKLSPKNIAAFARKTIIDRLRTATPHLVNMI 148
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS--EVQKRLIINVPN 118
+AG+D +EGP L IDYL + PY+ GY M EV+KRLI++V
Sbjct: 149 LAGYDEQEGPYLSMIDYLGTQFTGPYLMFGYGDFTFEEAMDALKACFQEVRKRLIVDVKA 208
Query: 119 FKVTMVSKDGIKHLPPI 135
+V ++ K+G++ L I
Sbjct: 209 LQVKIIDKNGVRDLENI 225
>gi|392579501|gb|EIW72628.1| hypothetical protein TREMEDRAFT_36819 [Tremella mesenterica DSM
1558]
Length = 229
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 16/148 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA G+ GDT +FA+++ +N++LY +RN + L P +AA + R+ LAE +RSRSPY N+L
Sbjct: 44 MACGGEPGDTSRFADYVDRNLRLYHIRNNFPLPPPSAASWVRRILAESIRSRSPYAVNVL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVPN- 118
+ G D P L+++DYL + +IPY G VTLS M ++ +++R ++V N
Sbjct: 104 LGGFDTTTSKPHLYWLDYLGTKADIPYAAQGVGMYVTLSTMDKWWYENIERREALDVLNK 163
Query: 119 --------------FKVTMVSKDGIKHL 132
F ++ KDG+ L
Sbjct: 164 CVDEVKKRVTIKFDFNCVLIDKDGVHSL 191
>gi|334186535|ref|NP_001190731.1| proteasome subunit beta type-2-B [Arabidopsis thaliana]
gi|332658101|gb|AEE83501.1| proteasome subunit beta type-2-B [Arabidopsis thaliana]
Length = 215
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 88/161 (54%), Gaps = 31/161 (19%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSR-------- 52
+A +G+ GD VQF E++ KN+ LY+ RNG LS AAA +TR +LA LR
Sbjct: 44 VAASGEPGDRVQFTEYVQKNVSLYQFRNGIPLSTAAAANFTRGELATALRKEFCATFQGY 103
Query: 53 -------SPYNCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR 105
+PY+ N+L+AG+D E G L++IDY+A+L ++ GY +LS M ++R
Sbjct: 104 SDFCVLMNPYSVNILMAGYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYR 163
Query: 106 S----------------EVQKRLIINVPNFKVTMVSKDGIK 130
S E++ RL+I PNF + +V KDG +
Sbjct: 164 SDMSVEEAIELVDKCILEIRSRLVIAPPNFVIKIVDKDGAR 204
>gi|24581176|ref|NP_608698.2| proteasome beta4R1 subunit [Drosophila melanogaster]
gi|18447102|gb|AAL68142.1| AT30033p [Drosophila melanogaster]
gi|22945374|gb|AAF51231.3| proteasome beta4R1 subunit [Drosophila melanogaster]
gi|220950992|gb|ACL88039.1| CG17301-PA [synthetic construct]
gi|220957990|gb|ACL91538.1| CG17301-PA [synthetic construct]
Length = 215
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 89/156 (57%), Gaps = 16/156 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ GD GD ++F++FI +N+ LYK+ NGY+L+ R A ++ R+ L+ YL+S + ++L
Sbjct: 44 MSTAGDGGDCLKFSDFILRNMDLYKITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G+D GP+L +IDYL + + + Y HG I+ E+++
Sbjct: 104 VGGYDLTSGPELHYIDYLGNSVPVRYGGHGAAMNFCTPILEEFYKPDMDTQAAYDVIKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
E+ KR +IN+ N + ++SK+GI + I +++
Sbjct: 164 VIELYKRFVINLRNIDLFLISKNGITKMNSINLESL 199
>gi|406607227|emb|CCH41488.1| Proteasome component [Wickerhamomyces ciferrii]
Length = 187
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 73/106 (68%), Gaps = 4/106 (3%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA TG++GDTVQFAE+I N+QLY +R YELSP A + +TR +LA+ +RSR N+L
Sbjct: 44 MAFTGEAGDTVQFAEYIQANVQLYGIRENYELSPEAISSFTRNELAKSIRSRV---INVL 100
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR 105
IAG+D ++ P L +IDYL + E+PY HGY T S++ ++R
Sbjct: 101 IAGYDENKKEPSLNWIDYLGTRAELPYAAHGYAAFYTFSLLDRHYR 146
>gi|255088812|ref|XP_002506328.1| predicted protein [Micromonas sp. RCC299]
gi|226521600|gb|ACO67586.1| predicted protein [Micromonas sp. RCC299]
Length = 208
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 86/145 (59%), Gaps = 18/145 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA++G GD V F E+I N++LY++RNG +LS AA+ YTR QLAE LR + PY N+L
Sbjct: 44 MAMSGPKGDCVYFGEYIQANMKLYELRNGMKLSTHAASSYTRNQLAESLR-KGPYQVNLL 102
Query: 61 IAGHDPE-EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+AG+D + + L+F+DYLAS ++ HGY G+ LS+ ++ +
Sbjct: 103 LAGYDADVDEASLYFMDYLASCQKVNSGGHGYGGMFCLSLFDKHWKPRMTREEAGDLVDK 162
Query: 106 --SEVQKRLIINVPNFKVTMVSKDG 128
+EV+ RL+ + V +V KDG
Sbjct: 163 CIAEVRTRLVTAPTKYHVKIVDKDG 187
>gi|334329194|ref|XP_003341196.1| PREDICTED: proteasome subunit beta type-2-like [Monodelphis
domestica]
Length = 231
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 47/182 (25%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELS---------PRAAAYYTRKQLAEYLRS 51
+ G++GDTVQFAE+I KN+QLYKMRN + L +A + R+Q + L+
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNAHLLQMGSTVGRTLAKADVFIYRRQNSVLLQM 103
Query: 52 ----------------------RSPYNCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITH 89
+PY+ N+L+AG+D EGP L+++DYLA+L + P+ H
Sbjct: 104 AMPGSKWQSLTPLLPPPSQGILTTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAH 163
Query: 90 GYPGIVTLSIMGEYHR----------------SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
GY +TLSI+ Y++ E+QKR I+N+P+F V ++ KDGI L
Sbjct: 164 GYGAFLTLSILDRYYKPSITREEAVELLKKCLEELQKRFILNLPSFSVRIIDKDGIHDLD 223
Query: 134 PI 135
I
Sbjct: 224 TI 225
>gi|312076399|ref|XP_003140843.1| proteasome subunit beta type 2 [Loa loa]
gi|307763992|gb|EFO23226.1| proteasome subunit beta type 2 [Loa loa]
Length = 238
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 89/154 (57%), Gaps = 18/154 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M G+ GD QF ++ +NIQLYK+R GYE+SPR++ ++ R+ +AE LR++ Y + L
Sbjct: 84 MICIGEDGDVAQFGDWCKRNIQLYKLRYGYEMSPRSSHHWIRRSIAEALRTQDYYVVDTL 143
Query: 61 IAGHDP-EEGPQLFFIDYLASLI-EIPYITHGYPGIVTLSIMGEYHRS------------ 106
I G+D E L +DYL + I + PYI G+ G + SI+ + +R+
Sbjct: 144 IGGYDSIENKAFLGSVDYLGNGIADQPYIFRGFSGRLCYSILDKTYRNDMTEAEGMDLLK 203
Query: 107 ----EVQKRLIINVPNFKVTMVSKDGIKHLPPIK 136
E ++R I+N+P F+V ++ K+G + L IK
Sbjct: 204 KCLHESKRRFIVNLPAFEVMVIDKNGTRQLEDIK 237
>gi|209880066|ref|XP_002141473.1| proteasome subunit beta type 2 [Cryptosporidium muris RN66]
gi|209557079|gb|EEA07124.1| proteasome subunit beta type 2, putative [Cryptosporidium muris
RN66]
Length = 201
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 17/148 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A GD GD QF EFI NI LY +RN L A A +TR +LAE LRS +P+N ML
Sbjct: 44 IATAGDIGDRNQFGEFIKCNINLYSLRNNVNLGTSATASFTRLELAELLRS-NPHNVRML 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
I G++ EGP L++ID +AS+ + HGY G++ I+ +++S
Sbjct: 103 IGGYNDREGPLLYWIDEIASMASVNKAAHGYGGLLVTGILDRFYKSNLTQDEALNILIKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHL 132
E++ R +I+ + V +V K+G+K L
Sbjct: 163 TAELKSRFLISQYDLFVKIVDKNGMKIL 190
>gi|84999618|ref|XP_954530.1| proteasome subunit beta type 2 [Theileria annulata]
gi|65305528|emb|CAI73853.1| proteasome subunit beta type 2, putative [Theileria annulata]
Length = 212
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 91/158 (57%), Gaps = 19/158 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ + G SGD +QF E+I K++ ++ + + ++ ++ A++ R+QLAEYLR +SPY ++L
Sbjct: 45 LLLAGPSGDRMQFGEYIRKSVHYHRYKTSFSMTTKSMAHFVRQQLAEYLR-KSPYQVDLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMG-EYH--------------- 104
+AG D GP+L++IDYLAS E+ HGY G ++ EYH
Sbjct: 104 VAGFD-NNGPKLYWIDYLASSTEVDRAVHGYGGHFLRGLLDKEYHENLTVEEAVSMLKKC 162
Query: 105 RSEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPE 142
R EV+ R ++ NF+ ++ K+G+ H I+ + PE
Sbjct: 163 RHEVKNRFLLGQSNFRAKIIDKNGV-HDVDIEDDDTPE 199
>gi|428163304|gb|EKX32382.1| 20S proteasome subunit beta type 2 [Guillardia theta CCMP2712]
Length = 201
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G+ GDT F+E++ KN+ LY +RNG LS AAA++ R ++A +R SP CNM+
Sbjct: 44 LGCVGELGDTKNFSEYVQKNMALYALRNGCHLSTHAAAHFVRGEIAHAIR-HSPKMCNMI 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G D + GP L+ IDYL + + Y HGY G S+M R
Sbjct: 103 LVGFDGDSGPSLYHIDYLGGMHRMNYGAHGYGGFFASSLMDRLWRPNMPLEEGIQLMKKA 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIK 130
+E+ +R ++ F + +V KDG +
Sbjct: 163 FAEINQRFLVGGATFTLKVVDKDGTR 188
>gi|321254353|ref|XP_003193046.1| proteasome subunit beta type 2 [Cryptococcus gattii WM276]
gi|317459515|gb|ADV21259.1| proteasome subunit beta type 2, putative [Cryptococcus gattii
WM276]
Length = 224
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 92/174 (52%), Gaps = 18/174 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDT FAE+I +N++LY +RN + L P AA+ + R+ LAE +RSR PY N+L
Sbjct: 44 MAFSGEPGDTNNFAEYIERNMRLYNIRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D P L++IDYL + +PY HG V+LS M ++
Sbjct: 104 LGGFDTTTSKPHLYWIDYLGTKAVVPYAAHGMGVYVSLSTMDKWWYEDMDKREGVDLLRR 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEENKGIPETEQYAAIP 157
E +KRL I +F ++ K+GI + KA I + + ET+ A P
Sbjct: 164 CIDETEKRLTIKF-DFNCILIDKNGIHKVDLSKADPIADIQEHPQETQVEAPHP 216
>gi|341876605|gb|EGT32540.1| hypothetical protein CAEBREN_25994 [Caenorhabditis brenneri]
gi|341877137|gb|EGT33072.1| hypothetical protein CAEBREN_23993 [Caenorhabditis brenneri]
Length = 202
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 86/153 (56%), Gaps = 18/153 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M G+ GD QF ++ +N+QLY +RNGYE+SP A ++ R+ +AE LRS+ Y ++L
Sbjct: 48 MMCIGEEGDVAQFGDWTKRNLQLYSVRNGYEVSPACAHHFVRRSIAEGLRSQDHYTVDVL 107
Query: 61 IAGHDP-EEGPQLFFIDYLAS-LIEIPYITHGYPGIVTLSIMG-EYHRS----------- 106
I G+D EE L +DYLA+ L + PY+ G+ G +IM EY +
Sbjct: 108 IGGYDDKEEKAFLGSVDYLANGLAQQPYLFRGFCGRFCYAIMDREYKKDMSEADGLALMN 167
Query: 107 ----EVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E ++R + N+P +KV ++ K+G + L +
Sbjct: 168 KCIGEAKRRFVANIPGYKVVIIDKNGYRKLDDV 200
>gi|126643898|ref|XP_001388136.1| 20S proteasome beta subunit D2 (PBD2) [Cryptosporidium parvum Iowa
II]
gi|126117213|gb|EAZ51313.1| 20S proteasome beta subunit D2 (PBD2) , putative [Cryptosporidium
parvum Iowa II]
gi|323508735|dbj|BAJ77261.1| cgd1_420 [Cryptosporidium parvum]
gi|323509775|dbj|BAJ77780.1| cgd1_420 [Cryptosporidium parvum]
Length = 203
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 17/148 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ V G GD +QF E+I N+ LY++RNG +LS A A +TR +LAE LRS P+N N+L
Sbjct: 44 IGVGGTLGDRMQFGEYIKCNLNLYRLRNGVQLSTTATANFTRNELAELLRS-DPHNVNIL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
I G+ EEG +L+++D LASL + HGY G++ I+ +Y++
Sbjct: 103 IGGYTKEEGAKLYWMDELASLGNVNNAAHGYGGLLVTGILDKYYKPNITQEEALDILVKC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E++ R +++ + V +V G+K +
Sbjct: 163 SEELKTRFLLSQYSLFVKIVDSQGVKFI 190
>gi|324507573|gb|ADY43210.1| Aldehyde dehydrogenase family 7 member A1 [Ascaris suum]
Length = 613
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 54/154 (35%), Positives = 86/154 (55%), Gaps = 18/154 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M G+ GD QF ++ +NIQLYK+R GYE+SPR+ ++ R+ +AE LRS Y + L
Sbjct: 459 MLCIGEDGDVAQFGDWSKRNIQLYKLRYGYEMSPRSCHHWIRRSIAESLRSEDYYIVDTL 518
Query: 61 IAGHDP-EEGPQLFFIDYLAS-LIEIPYITHGYPGIVTLSIMGEYHRS------------ 106
I G+D E+ L +DYL + L + PY+ G+ G +I+ +RS
Sbjct: 519 IGGYDEFEKKAFLGSVDYLGNGLADQPYLFRGFSGRFCYAILDRLYRSDMSEAEGLNVLK 578
Query: 107 ----EVQKRLIINVPNFKVTMVSKDGIKHLPPIK 136
E ++R + N+PNF+V ++ K+G + L +K
Sbjct: 579 KCLMEAKRRFVANLPNFQVMVIDKNGFRQLDDVK 612
>gi|403220573|dbj|BAM38706.1| proteasome subunit beta type 2 [Theileria orientalis strain
Shintoku]
Length = 208
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 91/158 (57%), Gaps = 19/158 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ + G GD QF E+I K++ + + + ++ ++ A++ R+QLAEYLR +SPY ++L
Sbjct: 45 LLLAGPLGDRSQFGEYIRKSVHYLRYKTSFNMTTKSMAHFVRQQLAEYLR-KSPYQVDLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMG-EYH--------------- 104
+AG+D +GPQLF++DYLAS I HGY G + ++ EYH
Sbjct: 104 VAGYDF-DGPQLFWVDYLASSTSIDRAVHGYGGNLLRGLLDKEYHENLTVEDAVRLLKKC 162
Query: 105 RSEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPE 142
R EV+ R +++ NF+ ++ K+G+ H I ++ PE
Sbjct: 163 RHEVKNRFLLSQSNFRAKVIDKNGV-HDVSISDEDTPE 199
>gi|384253589|gb|EIE27063.1| 20S proteasome beta subunit D, type 2 [Coccomyxa subellipsoidea
C-169]
Length = 198
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 86/152 (56%), Gaps = 17/152 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M ++G+ GD VQF+EFI N +LY +R+ L+ +A A +TR +LA LR + PYN N+L
Sbjct: 44 MCLSGEPGDRVQFSEFIMANSRLYALRHERALTTKAVANFTRSELATALR-KGPYNTNLL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
IAG D + GP L+++DYLA++ + GY LS+M R
Sbjct: 103 IAGWDEKAGPSLYWMDYLATMHSMNVAGTGYGSYFVLSMMDRLWRPDLTQEEAVELMEKG 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIK 136
EV++RL++ P++ + +V GI+ + I+
Sbjct: 163 IQEVKRRLVVAPPSYVIKIVDSAGIRTVKTIR 194
>gi|52548238|gb|AAU82106.1| 20S proteasome beta 4 subunit [Triticum aestivum]
Length = 213
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GD VQF EFI KN+ LY+ RN LS A A +TR +LA LR ++PY+ N++
Sbjct: 44 MGASGEPGDRVQFTEFIQKNLHLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNII 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG D + G +++IDY+A+L +I GY LS+M + +R
Sbjct: 103 LAGFDKDAGASMYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYRPDMTVEEAVDLVDKC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ NF + +V KDG +
Sbjct: 163 IKEIRLRLVVAPQNFAIKIVDKDGAR 188
>gi|294930707|ref|XP_002779664.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239889072|gb|EER11459.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 198
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 18/149 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G D+ QF EFI++N++LY + NG +L+ A A +TR +LA+ LR + PY NML
Sbjct: 45 VAAAGPQADSNQFLEFISRNVELYALVNGVQLTTHALASFTRNELADALR-KGPYQVNML 103
Query: 61 IAGHDPEEGP-QLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
I G+D ++G L+++DYLAS +I HGY L ++ + ++
Sbjct: 104 IGGYDDKDGSASLYYMDYLASCQKITRGAHGYAAYFVLGLLDKLYKKDMTQEDGLDAIKQ 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E +KR II+ NF + V KDGI ++
Sbjct: 164 CIKECKKRFIIDKSNFIIKAVDKDGIHNI 192
>gi|357118526|ref|XP_003561005.1| PREDICTED: proteasome subunit beta type-2-like [Brachypodium
distachyon]
Length = 209
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GD VQF EFI KN+ LY+ RN LS A A +TR +LA LR ++PY+ N++
Sbjct: 44 MGASGEPGDRVQFTEFIQKNLHLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNII 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG D + G +++IDY+A+L +I GY LS+M + +R
Sbjct: 103 LAGFDEDVGASMYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYRPDMTVEEAVDLVDKC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ NF + +V KDG +
Sbjct: 163 IKEIRLRLVVAPQNFAIKIVDKDGAR 188
>gi|195342039|ref|XP_002037609.1| GM18352 [Drosophila sechellia]
gi|194132459|gb|EDW54027.1| GM18352 [Drosophila sechellia]
Length = 211
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+ GD GD +QF++FI +N+ LYK+ NGY+L+ R A ++ R QL Y +S + +L
Sbjct: 44 MSTAGDGGDCLQFSDFIQRNMDLYKVTNGYDLTVRGAVHFIRSQLTAYRKSNCNFKVALL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G+D GP+L ++DY + + + Y HG I+ E+++
Sbjct: 104 VGGYDLSSGPELHYMDYFGNSVPVRYGGHGIGINFCTPIIEEFYKPDMDTQAAYDVIKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+ KR +IN+ NF + +++K+GI + I
Sbjct: 164 VIELYKRFVINLRNFDLFLINKEGITKMNRI 194
>gi|58265266|ref|XP_569789.1| proteasome subunit beta type 2 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134109223|ref|XP_776726.1| hypothetical protein CNBC2170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819238|sp|P0CQ13.1|PSB4_CRYNB RecName: Full=Probable proteasome subunit beta type-4
gi|338819239|sp|P0CQ12.1|PSB4_CRYNJ RecName: Full=Probable proteasome subunit beta type-4
gi|845293|gb|AAB06582.1| putative proteasome subunit [Cryptococcus neoformans]
gi|50259406|gb|EAL22079.1| hypothetical protein CNBC2170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226021|gb|AAW42482.1| proteasome subunit beta type 2, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 224
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 91/174 (52%), Gaps = 18/174 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDT FAE+I +N++LY +RN + L P AA+ + R+ LAE +RSR PY N+L
Sbjct: 44 MAFSGEPGDTNNFAEYIERNMRLYNIRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D P L++IDYL + +PY HG V+LS M ++
Sbjct: 104 LGGFDTTTSKPHLYWIDYLGTKAIVPYAAHGMGVYVSLSTMDKWWYEDMDKKEGVDLLRK 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEENKGIPETEQYAAIP 157
E +KRL I +F ++ K+GI + +A I + ETE A P
Sbjct: 164 CIDETEKRLTIKF-DFNCILIDKNGIHKVDLSQADPIANIQEHPQETEVEAPHP 216
>gi|242033305|ref|XP_002464047.1| hypothetical protein SORBIDRAFT_01g011260 [Sorghum bicolor]
gi|241917901|gb|EER91045.1| hypothetical protein SORBIDRAFT_01g011260 [Sorghum bicolor]
Length = 210
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GD VQF EFI KN+ LY+ RN LS AAA +TR +LA LR ++PY N++
Sbjct: 44 MGASGEPGDRVQFTEFIQKNLHLYQFRNTIPLSTAAAANFTRGELATALR-KNPYMVNII 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G+D + G L++IDY+A+L +I GY LS+M + +R
Sbjct: 103 LGGYDKDVGASLYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYRPDMTVEEAVDLVDKC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ NF + +V KDG +
Sbjct: 163 IKEIRLRLVVAPQNFVIKIVDKDGAR 188
>gi|195576095|ref|XP_002077912.1| GD23166 [Drosophila simulans]
gi|194189921|gb|EDX03497.1| GD23166 [Drosophila simulans]
Length = 211
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ GD GD +QF++FI +N+ LYK+ NGY+L+ R A ++ R QL Y +S Y +L
Sbjct: 44 ISTAGDGGDCLQFSDFIQRNMDLYKVTNGYDLTVRGAVHFIRSQLTTYRKSNCNYKVALL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G+D GP+L ++DY + + + Y HG I+ E+++
Sbjct: 104 VGGYDLSSGPELHYMDYFGNSVPVRYGGHGIGINFCTPIIEEFYKPDMDTQAAYDVIKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E+ KR +IN+ NF + +++K+GI + I
Sbjct: 164 VIELYKRFVINLRNFDLFLINKEGITKMNRI 194
>gi|17380193|sp|P91477.2|PSB2_CAEEL RecName: Full=Proteasome subunit beta type-2; AltName:
Full=Proteasome subunit beta 4
Length = 199
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 85/153 (55%), Gaps = 18/153 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M G+ GD QF ++ +N+QLY +RNGYE+SP A ++ R+ +AE LRS+ Y ++L
Sbjct: 45 MMCIGEEGDVAQFGDWTKRNLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVL 104
Query: 61 IAGHDPEEGPQ-LFFIDYLAS-LIEIPYITHGYPGIVTLSIMG-EYHRS----------- 106
I G+D +E L +DYLA+ L + PY+ G+ G +IM EY +
Sbjct: 105 IGGYDDKEDKAFLGSVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMN 164
Query: 107 ----EVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E ++R + N+P +KV ++ K G + L +
Sbjct: 165 KCIGEAKRRFVANIPGYKVVIIDKKGYRKLDDV 197
>gi|17508497|ref|NP_491261.1| Protein PBS-4 [Caenorhabditis elegans]
gi|351060149|emb|CCD67779.1| Protein PBS-4 [Caenorhabditis elegans]
Length = 202
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 85/153 (55%), Gaps = 18/153 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M G+ GD QF ++ +N+QLY +RNGYE+SP A ++ R+ +AE LRS+ Y ++L
Sbjct: 48 MMCIGEEGDVAQFGDWTKRNLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVL 107
Query: 61 IAGHDPEEGPQ-LFFIDYLAS-LIEIPYITHGYPGIVTLSIMG-EYHR------------ 105
I G+D +E L +DYLA+ L + PY+ G+ G +IM EY +
Sbjct: 108 IGGYDDKEDKAFLGSVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMN 167
Query: 106 ---SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E ++R + N+P +KV ++ K G + L +
Sbjct: 168 KCIGEAKRRFVANIPGYKVVIIDKKGYRKLDDV 200
>gi|168049085|ref|XP_001776995.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671696|gb|EDQ58244.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 84/148 (56%), Gaps = 17/148 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ G+SGD VQF+ FI KN+ LY RNG LS AAA +TR +LA LR ++PY NM+
Sbjct: 44 LGCIGESGDRVQFSNFIQKNMNLYHFRNGIPLSTSAAASFTRCELATALR-KAPYQVNMM 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+AG+D GP LF++DY+A+L ++ G+ LS+ +Y++
Sbjct: 103 MAGYDKRTGPCLFYLDYIATLQKLNKGAQGFGAYFILSLFDKYYQKNMNVEEALQLVDKC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIKHL 132
E+ R++ + N+ + +V ++G + L
Sbjct: 163 IWEIGTRMVASPANYVIKIVDRNGARLL 190
>gi|405119032|gb|AFR93805.1| proteasome subunit beta type 2 [Cryptococcus neoformans var. grubii
H99]
Length = 224
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 81/146 (55%), Gaps = 18/146 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G+ GDT FAE+I +N++LY +RN + L P AA+ + R+ LAE +RSR PY N+L
Sbjct: 44 MAFSGEPGDTNNFAEYIERNMRLYNIRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLL 103
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+ G D P L++IDYL + +PY HG V+LS M ++
Sbjct: 104 LGGFDTTTSKPHLYWIDYLGTKAIVPYAAHGMGVYVSLSTMDKWWYEDMDKREGVDLLRK 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGI 129
E +KRL I +F ++ K+GI
Sbjct: 164 CIDETEKRLTIKF-DFNCILIDKNGI 188
>gi|71032145|ref|XP_765714.1| proteasome subunit beta type 2 [Theileria parva strain Muguga]
gi|68352671|gb|EAN33431.1| proteasome subunit beta type 2, putative [Theileria parva]
Length = 212
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 89/158 (56%), Gaps = 19/158 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ + G D QF E+I K++ ++ + ++++ ++ A++ R+QLAEYLR +SPY ++L
Sbjct: 45 LLLAGPCCDRNQFGEYIRKSVHYHRYKTSFDMTTKSMAHFVRQQLAEYLR-KSPYQVDLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMG-EYH--------------- 104
+AG D GP+L++IDYLAS E+ HGY G ++ EYH
Sbjct: 104 VAGFD-NNGPKLYWIDYLASSTEVDRAVHGYGGHFLRGLLDKEYHENLTVEEAVSLLKKC 162
Query: 105 RSEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPE 142
R EV+ R ++ NF+ ++ K+GI H I+ N PE
Sbjct: 163 RHEVKNRFLLAQSNFRAKVIDKNGI-HDVDIEDDNTPE 199
>gi|308485256|ref|XP_003104827.1| CRE-PBS-4 protein [Caenorhabditis remanei]
gi|308257525|gb|EFP01478.1| CRE-PBS-4 protein [Caenorhabditis remanei]
Length = 204
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 20/155 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M G+ GD QF ++ +N+QLY +RNGYE+SP A ++ R+ +AE LRS+ Y ++L
Sbjct: 48 MMCIGEEGDVAQFGDWTKRNLQLYSVRNGYEVSPACAHHFVRRSIAEGLRSKDHYTVDVL 107
Query: 61 IAGH-DPEEGPQLFFIDYLASLIE---IPYITHGYPGIVTLSIMG-EYHRS--------- 106
I G+ D EE L +DYLA+ + PY+ G+ G +IM EY +
Sbjct: 108 IGGYDDKEEKAFLGSVDYLANGLAQQVFPYLFRGFCGRFCYAIMDREYKKDMSEAEGLAL 167
Query: 107 ------EVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E ++R + N+P +KV ++ K G + L +
Sbjct: 168 MNKCIGEAKRRFVANIPGYKVVIIDKKGYRKLDDV 202
>gi|401889292|gb|EJT53227.1| proteasome subunit beta type 2 [Trichosporon asahii var. asahii CBS
2479]
gi|406698996|gb|EKD02217.1| proteasome subunit beta type 2 [Trichosporon asahii var. asahii CBS
8904]
Length = 274
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA G+ GDT FA+++ +N++LY +R+ + L P AA + R+ LA+ LRSR PY N+L
Sbjct: 88 MAYGGEPGDTNNFADYVERNVRLYNIRHNHPLLPHAAGSWIRRTLADSLRSRRPYAVNLL 147
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKR 111
+AG+D + P L++IDYL + + Y HG+ +V LS M +Y + KR
Sbjct: 148 LAGYDTTTDVPHLYWIDYLGTKATVSYAAHGFGQLVCLSTMDKYWTEDADKR 199
>gi|219115922|ref|XP_002178756.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409523|gb|EEC49454.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 199
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 82/146 (56%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M V+G + D V F EF+AKNI+LY++ N +LS A A + R +LA LR + P+ N L
Sbjct: 44 MGVSGPNCDMVNFCEFVAKNIKLYELSNDIKLSTHAQANFARGELATALR-KGPFQVNTL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+ G D + G L+++DY+A+L ++ Y + GY LSIM + +R
Sbjct: 103 LGGFDNKVGASLYYLDYMAALQKVNYGSQGYASNFCLSIMDKEYRDDLNEADAVKIVEQC 162
Query: 107 --EVQKRLIINVPNFKVTMVSKDGIK 130
E+ R +I+ NF + +V KDG++
Sbjct: 163 IHELHTRFLISQKNFIIKVVDKDGVR 188
>gi|307106162|gb|EFN54409.1| hypothetical protein CHLNCDRAFT_135748 [Chlorella variabilis]
Length = 227
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 19/149 (12%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
AV+G++GD V F+E+I N++LY +RNG LS +A A YTR +LA LR +SPY+ N+L+
Sbjct: 77 AVSGEAGDRVNFSEYIIANVRLYALRNGATLSTKAVANYTRSELATALR-KSPYHTNLLM 135
Query: 62 AGHDPEE--GPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGE-YH-------------- 104
AG+D E GP L++ DYLA+L + GY LS+ + +H
Sbjct: 136 AGYDQGEGGGPALYWCDYLATLHHMNICGTGYGSYFVLSMFDKLWHPNVTEAEAFEMMRK 195
Query: 105 -RSEVQKRLIINVPNFKVTMVSKDGIKHL 132
EV+ RL++ P + V ++ GI+ L
Sbjct: 196 GVDEVKSRLVVAPPKYVVKVIDSQGIRTL 224
>gi|226532014|ref|NP_001148490.1| proteasome component2 [Zea mays]
gi|195605760|gb|ACG24710.1| proteasome subunit beta type 2 [Zea mays]
gi|195619760|gb|ACG31710.1| proteasome subunit beta type 2 [Zea mays]
gi|223947157|gb|ACN27662.1| unknown [Zea mays]
gi|413933376|gb|AFW67927.1| proteasome subunit beta type [Zea mays]
Length = 210
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ +G+ GD VQF EFI KN+ LY+ RN LS AAA +TR +LA LR ++PY N++
Sbjct: 44 LGASGEPGDRVQFTEFIQKNLHLYQFRNTIPLSTAAAANFTRGELATALR-KNPYMVNVI 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G+D + G L++IDY+A+L +I GY LS+M + +R
Sbjct: 103 LGGYDKDVGASLYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYRPDMTVEEAVDLVDKC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ NF + +V KDG +
Sbjct: 163 IKEIRLRLVVAPQNFVIKIVDKDGAR 188
>gi|452824734|gb|EME31735.1| 20S core proteasome subunit beta 4 [Galdieria sulphuraria]
Length = 193
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 17/148 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A+ G+ GD VQF E+I KN+ LY+ + G +LS A A + R +LA +R +P N+L
Sbjct: 44 LAMGGEPGDFVQFTEYIQKNLHLYEFQTGLQLSTHAVANFIRGELARLIRE-APVLANLL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----------- 109
+ G D GP L++IDYL +L ++ Y GY L + Y++ ++
Sbjct: 103 LGGFDEVSGPCLYYIDYLGTLEKLDYTAQGYASFFILGTLDRYYQKDITLEQGIELMKRC 162
Query: 110 -----KRLIINVPNFKVTMVSKDGIKHL 132
KR +IN NF + +V KDG++ +
Sbjct: 163 IQQLGKRFVINQRNFIMKVVDKDGVRQI 190
>gi|8671508|dbj|BAA96837.1| beta 4 subunit of 20S proteasome [Oryza sativa Japonica Group]
Length = 212
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 82/146 (56%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GD VQF EFI KN+ LY+ RN LS A A +TR +LA LR ++PY N+L
Sbjct: 44 MGASGEPGDRVQFTEFIQKNLHLYQFRNNIPLSTAATANFTRGELATALR-KNPYYVNVL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D + G L++IDY+A+ +I GY LS+M + +R
Sbjct: 103 LAGYDSDVGASLYYIDYIATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ NF + +V K+G +
Sbjct: 163 IKEIRLRLVVAPQNFIIKIVDKEGAR 188
>gi|115454751|ref|NP_001050976.1| Os03g0695600 [Oryza sativa Japonica Group]
gi|109940125|sp|Q9LST6.2|PSB2_ORYSJ RecName: Full=Proteasome subunit beta type-2; AltName: Full=20S
proteasome alpha subunit D; AltName: Full=20S proteasome
subunit beta-4
gi|27552546|gb|AAO19369.1| 20S proteasome beta 4 subunit [Oryza sativa Japonica Group]
gi|108710548|gb|ABF98343.1| Proteasome subunit beta type 2, putative, expressed [Oryza sativa
Japonica Group]
gi|113549447|dbj|BAF12890.1| Os03g0695600 [Oryza sativa Japonica Group]
gi|125545359|gb|EAY91498.1| hypothetical protein OsI_13132 [Oryza sativa Indica Group]
gi|125587570|gb|EAZ28234.1| hypothetical protein OsJ_12208 [Oryza sativa Japonica Group]
gi|149390831|gb|ABR25433.1| 20S proteasome beta subunit d2 [Oryza sativa Indica Group]
gi|215692385|dbj|BAG87805.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708673|dbj|BAG93942.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 212
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 82/146 (56%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GD VQF EFI KN+ LY+ RN LS A A +TR +LA LR ++PY N+L
Sbjct: 44 MGASGEPGDRVQFTEFIQKNLHLYQFRNNIPLSTAATANFTRGELATALR-KNPYYVNVL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+AG+D + G L++IDY+A+ +I GY LS+M + +R
Sbjct: 103 LAGYDSDVGASLYYIDYIATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ NF + +V K+G +
Sbjct: 163 IKEIRLRLVVAPQNFIIKIVDKEGAR 188
>gi|162458463|ref|NP_001105922.1| putative beta 4 proteasome subunit [Zea mays]
gi|53771821|gb|AAU93515.1| putative beta 4 proteasome subunit [Zea mays]
Length = 210
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 83/146 (56%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GD VQF EFI KN+ LY+ RN LS AAA +TR +LA LR ++PY N++
Sbjct: 44 MGASGEPGDRVQFTEFIQKNLHLYQFRNTIPLSTAAAANFTRGELATALR-KNPYMVNII 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGE-YH--------------- 104
+ G+D + G L++IDY+A+L +I GY LS+M + YH
Sbjct: 103 LGGYDKDVGASLYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKC 162
Query: 105 RSEVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ NF + +V KDG +
Sbjct: 163 IKEIRLRLVVAPQNFVIKIVDKDGAR 188
>gi|224029691|gb|ACN33921.1| unknown [Zea mays]
gi|414872238|tpg|DAA50795.1| TPA: proteasome subunit beta type [Zea mays]
Length = 211
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 83/146 (56%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GD VQF EFI KN+ LY+ RN LS AAA +TR +LA LR ++PY N++
Sbjct: 44 MGASGEPGDRVQFTEFIQKNLHLYQFRNTIPLSTAAAANFTRGELATALR-KNPYMVNII 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGE-YH--------------- 104
+ G+D + G L++IDY+A+L +I GY LS+M + YH
Sbjct: 103 LGGYDKDVGASLYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKC 162
Query: 105 RSEVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ NF + +V KDG +
Sbjct: 163 IKEIRLRLVVAPQNFVIKIVDKDGAR 188
>gi|226502282|ref|NP_001148542.1| LOC100282158 [Zea mays]
gi|195620210|gb|ACG31935.1| proteasome subunit beta type 2 [Zea mays]
Length = 211
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 83/146 (56%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GD VQF EFI KN+ LY+ RN LS AAA +TR +LA LR ++PY N++
Sbjct: 44 MGASGEPGDRVQFTEFIQKNLHLYQFRNTIPLSTAAAANFTRGELATALR-KNPYMVNII 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGE-YH--------------- 104
+ G+D + G L++IDY+A+L +I GY LS+M + YH
Sbjct: 103 LGGYDKDVGASLYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKC 162
Query: 105 RSEVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ NF + +V KDG +
Sbjct: 163 IKEIRLRLVVAPQNFVIKIVDKDGAR 188
>gi|123382702|ref|XP_001298721.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121879369|gb|EAX85791.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 191
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 85/145 (58%), Gaps = 19/145 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A++G++GD +Q +EF+ N+ LYK RNG ELS A A++ R +A+ +R +SPY NML
Sbjct: 44 LAMSGETGDCLQLSEFLQGNVALYKFRNGVELSSDALAHFIRHTMAKAVR-KSPYEVNML 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
++G+D + P L+F+DYL +L IPY GY +S+ ++ +
Sbjct: 103 LSGYDGK--PHLYFMDYLGTLQSIPYGAQGYCQYFVMSVFDKHFKEGMTLEEGKELMKLA 160
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGI 129
+++++R + F V +V K+GI
Sbjct: 161 LNQIKQRFTVAPHGFIVKLVDKNGI 185
>gi|82752562|ref|XP_727351.1| proteasome subunit beta type 2 [Plasmodium yoelii yoelii 17XNL]
gi|23483153|gb|EAA18916.1| proteasome subunit beta type 2 [Plasmodium yoelii yoelii]
Length = 195
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 85/146 (58%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ + G GD +QF EFI KN+ LY+ +N L ++ AY+TRK LA YLR R+PY N L
Sbjct: 45 LLLGGSIGDRIQFGEFIRKNVHLYQYQNSTSLYVKSFAYFTRKNLAYYLR-RNPYEVNCL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
IAG+D ++G QL++ DYL+++ I HGY + +I+ +Y+
Sbjct: 104 IAGYDDKDGYQLYWCDYLSNMDAINKGAHGYGAYLVNAILDKYYHEDMNLEEALVIFKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIK 130
E++KR ++ N+++ ++S + I+
Sbjct: 164 FEELKKRFLLTQINYELRIMSNNKIE 189
>gi|429328635|gb|AFZ80395.1| proteasome subunit beta type 2, putative [Babesia equi]
Length = 213
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 92/165 (55%), Gaps = 24/165 (14%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ + G GD QF E+I K++ + +NG+ +S + A++ R +LAEYLR +S Y+ ++L
Sbjct: 45 LLLAGPMGDRAQFGEYIRKSVHYHYYKNGFPMSTPSLAHFVRHELAEYLR-KSSYHVDLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMG-EYH--------------- 104
IAG D ++GP LF++DYLAS I HGY G + ++ EYH
Sbjct: 104 IAGFD-KDGPHLFWVDYLASSTAIDKAVHGYGGNLLRGLLDKEYHENISVAEAVALLKKC 162
Query: 105 RSEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEENKGIPE 149
R E++ R +++ NF+ ++ KDGI + +I E ++ PE
Sbjct: 163 RHELKNRFLLSQSNFRAKIIDKDGIHDI------DISEGDEVAPE 201
>gi|66825279|ref|XP_645994.1| proteasome subunit beta type 2 [Dictyostelium discoideum AX4]
gi|74858816|sp|Q55DY7.1|PSB2_DICDI RecName: Full=Proteasome subunit beta type-2
gi|60474149|gb|EAL72086.1| proteasome subunit beta type 2 [Dictyostelium discoideum AX4]
Length = 198
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 87/148 (58%), Gaps = 21/148 (14%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G++GD VQF E+I+KNI+LY +RN Y +S AAA + R +LA +RS PY+ N+++AG+
Sbjct: 48 GEAGDRVQFTEYISKNIKLYSLRNSYPMSTPAAANFIRNELATSIRSH-PYSINLILAGY 106
Query: 65 DPE---EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR---------------- 105
D E G L+++DYL SL ++ + HGY L ++ +H+
Sbjct: 107 DKEVEDGGTSLYYMDYLGSLQKLNFGCHGYASYFLLGLLDRHHKCDLSLEDGINLMHLCT 166
Query: 106 SEVQKRLIINVPNFKVTMVSKDGIKHLP 133
+E++ R +++ + + VS +GIK LP
Sbjct: 167 TELKTRFLVS-GKYTLKFVSSEGIKVLP 193
>gi|429857778|gb|ELA32626.1| proteasome component c11 [Colletotrichum gloeosporioides Nara gc5]
Length = 196
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 83/160 (51%), Gaps = 31/160 (19%)
Query: 1 MAVTGDSGDT---------VQFAEFIAKNIQ-----LYKMRNGYELSPRAAAYYTRKQLA 46
+A +G++GDT V+ FI + LY MRN +LSP A + R +LA
Sbjct: 23 IAYSGEAGDTAPPSFPSYPVRAGSFIVTTARWVLTLLYSMRNETDLSPSGLANFIRGELA 82
Query: 47 EYLRSRSPYNCNMLIAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR 105
LRSR PYN N+L+ G DP + P L+++DYLASL +PY HGY LSI+ ++H
Sbjct: 83 SSLRSRKPYNVNLLLGGVDPITQKPALYWLDYLASLAPVPYAAHGYAQYYCLSILDKHHH 142
Query: 106 ----------------SEVQKRLIINVPNFKVTMVSKDGI 129
E+++RL I+ V V+KDGI
Sbjct: 143 PDITLGQGIKILNMCTDELKRRLPIDFKGMVVKAVTKDGI 182
>gi|123445636|ref|XP_001311576.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121893391|gb|EAX98646.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 191
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 86/145 (59%), Gaps = 19/145 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A++G++GD +Q +E++ N+ LYK RNG ELS A A++ R +A+ +R +SPY NML
Sbjct: 44 LAMSGETGDCLQLSEYLQGNVALYKFRNGVELSSDALAHFIRHTMAKAVR-KSPYEVNML 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
++G+D + P L+F+DYL +L IPY GY +S+ ++++
Sbjct: 103 LSGYDGK--PHLYFMDYLGTLQSIPYGAQGYCQYFVMSVFDKHYKEGLTLEDGKELMKLA 160
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGI 129
+++++R + F V +V K+GI
Sbjct: 161 LNQIKQRFTVAPHGFIVKLVDKNGI 185
>gi|399216561|emb|CCF73248.1| unnamed protein product [Babesia microti strain RI]
Length = 211
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 88/158 (55%), Gaps = 21/158 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ + G SGD QF E+I KNI + +N Y S A A + R++LA +LR SPY +ML
Sbjct: 45 ILLAGPSGDREQFGEYIRKNIHFQRFKNSYPTSIGATANFARQELAYFLRE-SPYQVDML 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYH---------------- 104
IAG + ++ P+L++IDYLAS +E+ HGY G ++ +Y+
Sbjct: 104 IAGFE-QDTPKLYWIDYLASSMEVCKAVHGYGGNFVRGLVDKYYTCDITKEQAIELMKKI 162
Query: 105 RSEVQKRLIINVPNFKVTMVSKDG---IKHLPPIKAKN 139
R E++ R +++ NF V ++ KDG IK PP + K+
Sbjct: 163 RDELRFRFLVSQSNFVVKLIDKDGIADIKLFPPQEVKH 200
>gi|303288049|ref|XP_003063313.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455145|gb|EEH52449.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 207
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 84/145 (57%), Gaps = 18/145 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A++G GD V F E++ N++LY+++NG++LS AA + R +LA LR + PY NML
Sbjct: 44 LAMSGPKGDCVHFGEYVQANMKLYELKNGHKLSTHAAMSFIRGELAAALR-KGPYQVNML 102
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
+AG+D E+ L+FIDYLAS ++ HGY G+ LS+ ++ +
Sbjct: 103 LAGYDEHEDDASLYFIDYLASTQKVNSGGHGYGGMFCLSLFDKHWKPKMTRAEADVLVDT 162
Query: 106 --SEVQKRLIINVPNFKVTMVSKDG 128
+EV++RL+ + V +V K G
Sbjct: 163 CIAEVRERLVTAPAKYHVKIVDKTG 187
>gi|443919701|gb|ELU39797.1| proteasome component Pre1 [Rhizoctonia solani AG-1 IA]
Length = 830
Score = 97.1 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 29/152 (19%)
Query: 22 QLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHD-----------PEEGP 70
+LY+MR + L P +AA + R+ LA+ LRSR PY+ N+L+ G D P+ P
Sbjct: 52 KLYQMRYVHPLRPPSAASWIRRSLADSLRSRHPYSVNLLLGGVDLAEAPVHAPDGPKGRP 111
Query: 71 QLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----------------SEVQKRLII 114
L++IDYL +L E+P+ HGY LS+ YH +E+QKRLI+
Sbjct: 112 SLYWIDYLGTLAEVPFAAHGYGSYFVLSLFDRYHNPQANLEEGLETLRRGIAEIQKRLIV 171
Query: 115 NVPNFKVTMVSKDGIKHLPPIKAKNIPEENKG 146
+ N+ V ++++DG+K + A E NKG
Sbjct: 172 GLENWSVKLITRDGVKEVD--LASGEVEPNKG 201
>gi|323451149|gb|EGB07027.1| hypothetical protein AURANDRAFT_60167 [Aureococcus anophagefferens]
Length = 201
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 20/154 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ +G D V F E++ KN+ LYK+ NG LS +A + R LA LR + PY N+L
Sbjct: 44 LGQSGVGADNVAFTEYVQKNVALYKINNGLSLSTKATNNFIRGDLATALR-KGPYQTNLL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMG-EYHR-------------- 105
+ G D G L++IDY+AS ++ + HGY LSI+ E+
Sbjct: 103 LGGFDKGVGASLYYIDYMASSNKVNFGCHGYGSNFVLSILDREWTEGLDEAAGLDIINKC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHL---PPI 135
+E+Q R +I++P F + +V KDGI+ L PP+
Sbjct: 163 IAELQTRFLIHMPKFLIKIVDKDGIRVLEQNPPV 196
>gi|449016393|dbj|BAM79795.1| 20S core proteasome subunit beta 4 [Cyanidioschyzon merolae strain
10D]
Length = 215
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 17/148 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
++ GD GD QF E+I +N+ LY++R G LS R A++ R +LA LR R PY N++
Sbjct: 44 LSAGGDLGDVAQFTEYIQRNVHLYELRAGTSLSTRQIAHFIRGELARALRER-PYEINLI 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G+D EG L++IDYL SL + Y GY LS + +R
Sbjct: 103 LGGYDQGEGTSLYYIDYLGSLHMMKYTAQGYAAYFVLSTLDRLYRPNMNLEEALEVLRAC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+ +R ++ +F V + + G++ L
Sbjct: 163 LDEMGRRFLLKQRHFMVKIADERGVRVL 190
>gi|258566688|ref|XP_002584088.1| proteasome component C11 [Uncinocarpus reesii 1704]
gi|237905534|gb|EEP79935.1| proteasome component C11 [Uncinocarpus reesii 1704]
Length = 137
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 17/122 (13%)
Query: 26 MRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDP-EEGPQLFFIDYLASLIEI 84
MRN ELSP A A + R +LA LRSRSPY N+L+ G DP + P L+++DYLASL +
Sbjct: 1 MRNETELSPSAVANFVRGELARSLRSRSPYTVNLLLGGVDPITQQPSLYWLDYLASLAPV 60
Query: 85 PYITHGYPGIVTLSIMGEYHR----------------SEVQKRLIINVPNFKVTMVSKDG 128
PY HGY LSI+ ++H+ E+++RL I+ V +V+KDG
Sbjct: 61 PYAAHGYAQYYCLSILDKHHQPDISYDQGLKLLEMCTDELKRRLPIDFKGVYVKVVTKDG 120
Query: 129 IK 130
IK
Sbjct: 121 IK 122
>gi|156099356|ref|XP_001615680.1| 20S proteasome beta 4 subunit [Plasmodium vivax Sal-1]
gi|148804554|gb|EDL45953.1| 20S proteasome beta 4 subunit, putative [Plasmodium vivax]
Length = 195
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 85/146 (58%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ + G GD +QF EFI KN+ LY+ +N +L ++ A++TRK LA YLR R+PY N L
Sbjct: 45 LLLGGSIGDRIQFGEFIRKNVHLYQYQNSTDLFVKSFAFFTRKNLAYYLR-RNPYEVNCL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
IAG+D ++G QL++ DYL+++ + HGY + I+ +Y+
Sbjct: 104 IAGYDNKDGYQLYWCDYLSNMDAVNKGAHGYGAYLVNGILDKYYHENMNLEEALLIFKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIK 130
E++KR ++ N+++ +++ + I+
Sbjct: 164 FEELKKRFLLTQINYELRIMADNKIE 189
>gi|221059017|ref|XP_002260154.1| 20S proteasome beta 4 subunit [Plasmodium knowlesi strain H]
gi|193810227|emb|CAQ41421.1| 20S proteasome beta 4 subunit, putative [Plasmodium knowlesi strain
H]
Length = 195
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 85/146 (58%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ + G GD +QF EFI KN+ LY+ +N +L ++ A++TRK LA YLR R+PY N L
Sbjct: 45 LLLGGSIGDRIQFGEFIRKNVHLYQYQNSTDLFVKSFAFFTRKNLAYYLR-RNPYEVNCL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
IAG+D ++G QL++ DYL+++ + HGY + I+ +Y+
Sbjct: 104 IAGYDNKDGYQLYWCDYLSNMDAVNKGAHGYGAYLVNGILDKYYHENINLDEALLIFKKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIK 130
E++KR ++ N+++ +++ + ++
Sbjct: 164 FEELKKRFLLTQINYELRIMTDNKVE 189
>gi|308812780|ref|XP_003083697.1| 20S proteasome beta 4 subunit (ISS) [Ostreococcus tauri]
gi|116055578|emb|CAL58246.1| 20S proteasome beta 4 subunit (ISS) [Ostreococcus tauri]
Length = 767
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/146 (35%), Positives = 82/146 (56%), Gaps = 18/146 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G GD V FAE++A N++LY+++ +EL +A A+Y R +LA LR + PY N L
Sbjct: 44 MATSGPRGDCVAFAEYVAANVRLYRLKYQHELDVKATAHYARNELATALR-KGPYQVNAL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYH---------------- 104
+AG D GP+L+F+DYLA+ + HGY G+ LS+ ++
Sbjct: 103 LAGVDA-NGPELYFMDYLATCHRVNTGGHGYGGMFCLSLFDKHWVPNMSRAQAMELVDLC 161
Query: 105 RSEVQKRLIINVPNFKVTMVSKDGIK 130
+EV +RL+ + V +V K G++
Sbjct: 162 VAEVCERLVTAPTEYLVKIVDKKGVE 187
>gi|403356758|gb|EJY77982.1| Proteasome subunit beta type, putative [Oxytricha trifallax]
Length = 195
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 18/147 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G+ D QF +I KN++L R G+ELS A+A Y R +LA LR R+PY N L
Sbjct: 44 LAAAGEQTDRYQFCNYIQKNLELQAFRTGHELSVEASAQYMRTELASALR-RAPYQVNCL 102
Query: 61 IAGHDPEEG-PQLFFIDYLASLIEIPYITHGYPGIVTLSIM-GEYHRS------------ 106
I G D +G +LF++DY +L ++ HGY S++ YH+
Sbjct: 103 IGGFDHIDGKAKLFWMDYFGTLQQVTKGAHGYAAYFVNSVLDNNYHKDMTLEDGIATLKK 162
Query: 107 ---EVQKRLIINVPNFKVTMVSKDGIK 130
E++ R IIN P F +V+K+GI+
Sbjct: 163 CIQELRTRFIINQPAFIAKIVTKEGIR 189
>gi|299470780|emb|CBN79826.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 218
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 21/150 (14%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G D V F E+I+KN+ LY++ N +L+ +AAA + R +LA+ LR + P+ +L
Sbjct: 44 LACAGPQSDCVSFTEYISKNMALYELNNDVKLTTKAAATFIRGELAKALR-KGPFQTQLL 102
Query: 61 IAGHDPEEGPQ----LFFIDYLASLIEIPYITHGYPGIVTLSIMG-EYHRS--------- 106
+ G D E + LF++DYL +L ++PY HGY TLS+M EY +
Sbjct: 103 MGGVDKREAGKDEASLFWLDYLGTLQKVPYGAHGYGAAFTLSVMDREYVKGLSLDEALGI 162
Query: 107 ------EVQKRLIINVPNFKVTMVSKDGIK 130
E+ R +I NF + +V+ +GIK
Sbjct: 163 IDNCIKELHTRFLIAQKNFVIKVVTAEGIK 192
>gi|67528518|ref|XP_662061.1| hypothetical protein AN4457.2 [Aspergillus nidulans FGSC A4]
gi|40741032|gb|EAA60222.1| hypothetical protein AN4457.2 [Aspergillus nidulans FGSC A4]
Length = 135
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 17/122 (13%)
Query: 26 MRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDP-EEGPQLFFIDYLASLIEI 84
MRN ELSP A A + R +LA LRSR+PY N+L+ G DP + P L++IDYLASL +
Sbjct: 1 MRNDTELSPNAVANFVRGELARSLRSRNPYTVNLLLGGVDPISQKPHLYWIDYLASLASV 60
Query: 85 PYITHGYPGIVTLSIMGEYHR----------------SEVQKRLIINVPNFKVTMVSKDG 128
PY HGY LS + ++H E+++RL I+ V +V+KDG
Sbjct: 61 PYAAHGYAQYYCLSTLDKHHHPDITLEQGMKLLEMCTDELKRRLPIDYKGVLVKVVTKDG 120
Query: 129 IK 130
++
Sbjct: 121 VR 122
>gi|145355044|ref|XP_001421781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582019|gb|ABP00075.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 217
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 18/147 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA++G GD V F E++ N++LY+++ G+EL A A+Y R +LAE LRS PY N L
Sbjct: 44 MALSGPKGDCVAFGEYLRANVRLYRLKYGHELDVSATAHYARNELAEALRS-GPYQVNCL 102
Query: 61 IAGHDP-EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYH--------------- 104
+AG D + P+L F+DYLA+ + HGY G+ LS+ ++
Sbjct: 103 LAGFDKLKNEPELHFMDYLATCHRVNTGGHGYGGMFCLSLFDKHWVPNMSRAQAMDLVDL 162
Query: 105 -RSEVQKRLIINVPNFKVTMVSKDGIK 130
EV +RL+ ++ V +V K+G +
Sbjct: 163 CVGEVCERLVTAPTDYLVKIVDKNGCE 189
>gi|258597933|ref|XP_001348850.2| 20S proteasome beta 4 subunit, putative [Plasmodium falciparum 3D7]
gi|255528933|gb|AAN37289.2| 20S proteasome beta 4 subunit, putative [Plasmodium falciparum 3D7]
Length = 195
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 85/146 (58%), Gaps = 17/146 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ + G GD +QF EFI KN+ LY+ +N ++ ++ A++TRK LA YLR R+P+ N L
Sbjct: 45 LLLGGSIGDRLQFGEFIRKNVHLYQYQNNTDMFVKSFAFFTRKNLAYYLR-RNPFEVNCL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
IAG+D ++G QL++ DYL+++ + HGY + +I+ +Y+
Sbjct: 104 IAGYDKKDGYQLYWCDYLSNMDSVNKGAHGYGAYLVSAILDKYYHENLTVDEALDIFKLC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIK 130
E++KR ++ N+++ ++ + ++
Sbjct: 164 FEELKKRFLLTQINYELRIMYDNKVE 189
>gi|32401291|gb|AAP80818.1| proteasome chain protein [Griffithsia japonica]
Length = 187
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 20/133 (15%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
A G GD +F+E + K+++LY +R+G +S A A YTR +LA +LR RSP+ CN++
Sbjct: 45 FAAAGVPGDVTKFSEHVQKDVRLYSLRSGISMSTAAVANYTRGELAHFLR-RSPFQCNVI 103
Query: 61 IAGHDPE---EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR------------ 105
I G+D +GP L+ DYL +L ++ + GY LS + Y +
Sbjct: 104 IGGYDKAPNGDGPSLYSCDYLGTLTKLTFAAEGYAQYFVLSTLDRYWKKGMSLDEGLDAI 163
Query: 106 ----SEVQKRLII 114
+EVQKRL++
Sbjct: 164 RKCIAEVQKRLVL 176
>gi|194777793|ref|XP_001967865.1| GF20768 [Drosophila ananassae]
gi|190631497|gb|EDV44914.1| GF20768 [Drosophila ananassae]
Length = 212
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA GD+ D++QF +FI +N+ LYK+ N Y +S A ++TR LA +LR + N+L
Sbjct: 44 MAAAGDASDSLQFTDFIVRNMHLYKIINSYHMSIPAVVHFTRTHLASFLRCDTQRQLNLL 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHG----YPGIVTLSIMGEYHR----------- 105
+ G DP GP+L +ID S I + HG + G + ++ Y
Sbjct: 104 LGGFDPWTGPELHYIDRFGSSTAILFGGHGAGIKFCGPIFDTLHSPYMDQREAYCILEKC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEE 143
E+Q+RL N NF V ++ + GI IK ++ +E
Sbjct: 164 VGEIQRRL-WNQRNFDVFVMDQQGITQWETIKLQSFRKE 201
>gi|224006532|ref|XP_002292226.1| proteasome subunit beta type 4 [Thalassiosira pseudonana CCMP1335]
gi|220971868|gb|EED90201.1| proteasome subunit beta type 4 [Thalassiosira pseudonana CCMP1335]
Length = 176
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 20/152 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRN-GYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
M V+G + D V F+E+I+KN++LY++ N G +LS A A + R +LA+ LR + P+ N+
Sbjct: 18 MGVSGPNCDLVNFSEYISKNLKLYELSNDGVQLSTHAQANFCRGELAKALR-KGPFQVNV 76
Query: 60 LIAGHDPE--EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMG---------------- 101
++ G+D + G L+ +DYL S ++ Y GY LSIM
Sbjct: 77 ILGGYDAKVPNGGSLYVMDYLGSCVKANYGAQGYASNFCLSIMDRDWDEGMTEEQAVTLV 136
Query: 102 EYHRSEVQKRLIINVPNFKVTMVSKDGIKHLP 133
E E+Q R +IN NF ++ KDG++ L
Sbjct: 137 EKCIKELQMRFLINQSNFITKVIDKDGVRTLS 168
>gi|14594929|emb|CAC43325.1| putative beta4 proteasome subunit [Nicotiana tabacum]
Length = 134
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G++GD QF E++ KN+ LY+ RNG L+ AAA +TR +LA LR ++PY N++
Sbjct: 44 MGASGEAGDRAQFTEYVQKNVALYQFRNGIPLTTAAAANFTRGELATALR-KNPYMVNII 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGY 91
+AG+D E GP L+++DY+A+L ++ GY
Sbjct: 103 LAGYDKETGPSLYYVDYIATLHKVDKGAFGY 133
>gi|160331745|ref|XP_001712579.1| prsB4 [Hemiselmis andersenii]
gi|159766028|gb|ABW98254.1| prsB4 [Hemiselmis andersenii]
Length = 193
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+AV+G GD +QF +F+ K IQLY ++ G LS R+ A RK+L++ LR ++P N N+
Sbjct: 44 LAVSGYPGDVIQFTDFLQKTIQLYTLKTGLTLSTRSVANCIRKELSDCLR-KNPININLT 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
+ G D G L+FIDYL SL + + G+ ++ S + Y++ ++
Sbjct: 103 LIGFDKIYGSSLYFIDYLGSLQRMDFCVQGHSSLILSSFLDRYYKQKM 150
>gi|195437302|ref|XP_002066579.1| GK24488 [Drosophila willistoni]
gi|194162664|gb|EDW77565.1| GK24488 [Drosophila willistoni]
Length = 212
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 79/151 (52%), Gaps = 16/151 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+AV GD +Q + +I+ N+ LY+++NGY S A+A + R+ L Y+++ ++L
Sbjct: 49 IAVMGDGAHALQISSYISSNLHLYQIQNGYFPSAEASANFARQSLVTYMKNLVKVRISVL 108
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
IA +D + G +LF ID L + + Y HG ++ +I+ +
Sbjct: 109 IASYDKQRGAELFLIDSLGNSHSVKYAGHGCASGLSNNILQSEWKPDLTRTQGHALLKKC 168
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
V RLI+N+ NF V MV KDG++ + PI
Sbjct: 169 ICTVHHRLILNLRNFIVIMVDKDGVQEMEPI 199
>gi|422295602|gb|EKU22901.1| signal peptidase, endoplasmic reticulum-type [Nannochloropsis
gaditana CCMP526]
Length = 362
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 17/148 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G + D E++ KN+ LY+ N +L AAA + R+ LA LR + PY N+L
Sbjct: 216 LAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALR-KGPYQTNLL 274
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G D ++G L+F+DYL S+ ++ + GY TLSI +R
Sbjct: 275 LGGFDEKDGAALYFLDYLGSMQKVNFGAQGYASNFTLSIFDREYREGMTLPEAEVVLEKA 334
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+ R +I+ P + + +V KDG++ L
Sbjct: 335 KKELAVRFLISQPKWIMKVVDKDGVRTL 362
>gi|294928984|ref|XP_002779246.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
gi|239888275|gb|EER11041.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
Length = 175
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 73/119 (61%), Gaps = 2/119 (1%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G D+ QF EFI++N++LY + NG +L+ A A +TR +LA+ LR + PY NML
Sbjct: 45 VAAAGPQADSNQFLEFISRNVELYALVNGIQLTTHALANFTRNELADALR-KGPYQVNML 103
Query: 61 IAGHDPEEGP-QLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVPN 118
I G+D ++G L+++DYLAS +I HGY L ++ + ++ ++ + ++ N
Sbjct: 104 IGGYDDKDGSASLYYMDYLASCQKITRGAHGYAAYFVLGLLDKLYKKDMTQEEGLDAIN 162
>gi|239792329|dbj|BAH72518.1| ACYPI004276 [Acyrthosiphon pisum]
Length = 119
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 56/75 (74%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M VTG++GD +FAE+I +N++LY+MRNGY+LS A A +TRK +AE+LRS+SPY N +
Sbjct: 44 MGVTGEAGDVPRFAEYITQNVKLYRMRNGYDLSIPAIATFTRKTVAEHLRSQSPYQVNFM 103
Query: 61 IAGHDPEEGPQLFFI 75
+ G++P E F +
Sbjct: 104 LGGYNPTEKKITFIL 118
>gi|397609474|gb|EJK60384.1| hypothetical protein THAOC_19273 [Thalassiosira oceanica]
Length = 266
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 84/149 (56%), Gaps = 18/149 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRN-GYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
M V+G + D V F+E+++KN++L ++ N G +LS A A + R +LA+ +R + PY N+
Sbjct: 110 MGVSGPNCDLVNFSEYVSKNLKLIELSNDGQKLSTHAQANFCRGELAKAIR-KGPYQVNI 168
Query: 60 LIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMG----------------EY 103
++ G+D ++G ++ +DY+ S ++ Y GY LSIM E+
Sbjct: 169 ILGGYDEKKGGSMYVMDYMGSCVKQNYGAQGYASNFCLSIMDRDWDEGMNEEQAVKVVEH 228
Query: 104 HRSEVQKRLIINVPNFKVTMVSKDGIKHL 132
E++ R +IN NF + ++ K+G++ L
Sbjct: 229 CIQELKMRFLINQSNFIIKVIDKEGVRTL 257
>gi|294901497|ref|XP_002777385.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
gi|239885012|gb|EER09201.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
Length = 228
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G D+ QF EFI++N++LY + NG +L+ A A +TR +LA+ LR + PY NMLI G+
Sbjct: 73 GPQADSNQFLEFISRNVELYALVNGVQLTTHALASFTRNELADALR-KGPYQVNMLIGGY 131
Query: 65 DPEEGP-QLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQK 110
D ++G L+++DYLAS +I HGY L ++ + ++ ++ +
Sbjct: 132 DDKDGSASLYYMDYLASCQKITRGAHGYAAYFVLGLLDKLYKKDMTQ 178
>gi|47185648|emb|CAF87242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 99
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 45/52 (86%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSR 52
+ G++GDTVQFAE+I KN+QLYKMRNGYELSP AAA +TRK LAEYLRSR
Sbjct: 44 LLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPSAAANFTRKNLAEYLRSR 95
>gi|340507213|gb|EGR33212.1| proteasome subunit beta, putative [Ichthyophthirius multifiliis]
Length = 193
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 18/146 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA++G+S +QF+++IA+NI L+K RNG L+ + A + R +LA +R+ PY N L
Sbjct: 44 MAMSGESAYRLQFSDYIARNIALFKYRNGTPLNTQECASFIRSELAYGIRN-GPYMVNCL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
IAG D ++ PQL+++DY+ +L + HGY LS + +++
Sbjct: 103 IAGFDYDQ-PQLYWVDYMGTLQKSVKAAHGYAAHFVLSTLDNFYKPELTLQEGIEIMKKC 161
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIK 130
E++ R +I+ NF +V+K+G +
Sbjct: 162 VHELKTRFLISQQNFVCKIVTKEGFQ 187
>gi|295672696|ref|XP_002796894.1| proteasome component C11 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282266|gb|EEH37832.1| proteasome component C11 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 135
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 17/132 (12%)
Query: 26 MRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDP-EEGPQLFFIDYLASLIEI 84
MRN ELSP A A + R +L+ LRSR PY N+L+ G DP E P L+++DYLA+L +
Sbjct: 1 MRNETELSPSAVANFVRGELSCSLRSRRPYTVNLLLGGVDPITEKPSLYWLDYLAALAPV 60
Query: 85 PYITHGYPGIVTLSIMGEYHR----------------SEVQKRLIINVPNFKVTMVSKDG 128
PY HGY LSI+ ++H E+++RL I+ V +V K+G
Sbjct: 61 PYAAHGYAQYYCLSILDKHHHPNITFEQGLKLLQMCTDELKRRLPIDFKGVLVKVVRKEG 120
Query: 129 IKHLPPIKAKNI 140
I+ + +K +
Sbjct: 121 IEEVDFDNSKQV 132
>gi|68064745|ref|XP_674356.1| 20S proteasome beta 4 subunit [Plasmodium berghei strain ANKA]
gi|56492872|emb|CAH94481.1| 20S proteasome beta 4 subunit, putative [Plasmodium berghei]
Length = 214
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 36/165 (21%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ + G GD +QF EFI KN+ LY+ +N L ++ AY+TRK LA YLR R+PY N L
Sbjct: 45 LLLGGSIGDRIQFGEFIRKNVHLYQYQNSTSLYVKSFAYFTRKNLAYYLR-RNPYEVNCL 103
Query: 61 IAGHDP-------------------EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMG 101
IAG+D ++G QL++ DYL+++ I HGY + +I+
Sbjct: 104 IAGYDDVRYKTLKKINNYNFFYYCLKDGYQLYWCDYLSNMDAINKGAHGYGAYLVNAILD 163
Query: 102 EYHR----------------SEVQKRLIINVPNFKVTMVSKDGIK 130
+Y+ E++KR ++ N+++ ++S + I+
Sbjct: 164 KYYHENMNLEEALVIFKKCFEELKKRFLLTQINYELRIMSNNKIE 208
>gi|348667598|gb|EGZ07423.1| hypothetical protein PHYSODRAFT_288888 [Phytophthora sojae]
Length = 197
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 21/152 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G D + F E+I KN++LY++RNG L+ A A Y R +LA +LR R+PY N+L
Sbjct: 44 MVTSGPQSDRLAFGEYIQKNMKLYELRNGVTLNGPATANYVRGELARFLR-RAPYQVNVL 102
Query: 61 IAGHD--PEEG--PQLFFIDYLASLIEIPYITHGYPGIVTLSIMG-EYH----------- 104
I D PE+ P L +IDYL S++++ + HGY LSI E+
Sbjct: 103 IGAVDATPEQKAEPSLHWIDYLGSMVKVNFGAHGYGAHFCLSIFDREWKPDMTLDEAKSV 162
Query: 105 ----RSEVQKRLIINVPNFKVTMVSKDGIKHL 132
R+E+ R ++ + T++ +GI +
Sbjct: 163 LKKCRAELDMRFLVRNGQWAYTLIDANGISQV 194
>gi|301110258|ref|XP_002904209.1| proteasome subunit beta type-2, putative [Phytophthora infestans
T30-4]
gi|66270177|gb|AAY43418.1| 20S proteasome subunit [Phytophthora infestans]
gi|262096335|gb|EEY54387.1| proteasome subunit beta type-2, putative [Phytophthora infestans
T30-4]
Length = 197
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 21/152 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G D + F E+I KN++LY++RNG L+ A A Y R +LA +LR R+PY N+L
Sbjct: 44 MVTSGPQSDRLAFGEYIQKNMKLYELRNGVTLNGPATANYVRGELARFLR-RAPYQVNLL 102
Query: 61 IAGHD--PEEG--PQLFFIDYLASLIEIPYITHGYPGIVTLSIMG-EYH----------- 104
I D PE+ P L +IDYL S++++ + HGY LSI E+
Sbjct: 103 IGAVDASPEQKAEPSLHWIDYLGSMVKVNFGAHGYGAHFCLSIFDREWKPDMTLDEAKET 162
Query: 105 ----RSEVQKRLIINVPNFKVTMVSKDGIKHL 132
R+E+ R ++ + T++ GI +
Sbjct: 163 LKKCRAELDMRFLVRNGQWAYTLIDAGGISQV 194
>gi|268560948|ref|XP_002646328.1| C. briggsae CBR-PBS-4 protein [Caenorhabditis briggsae]
Length = 196
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 24/153 (15%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M G+ GD QF ++ +N+QLY +RN +A ++ R+ +AE LRS+ Y ++L
Sbjct: 48 MMCIGEEGDVAQFGDWTKRNLQLYSVRNA------SAHHFVRRSIAEGLRSQDHYTVDVL 101
Query: 61 IAGH-DPEEGPQLFFIDYLAS-LIEIPYITHGYPGIVTLSIMG-EYHRS----------- 106
I G+ D EE L +DYLA+ L + PY+ G+ G +IM EY +
Sbjct: 102 IGGYDDKEEKAFLGSVDYLANGLAQQPYLFRGFCGRFCYAIMDHEYKKDMSETEGLALMN 161
Query: 107 ----EVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
E ++R + N+P +KV ++ K+G + L +
Sbjct: 162 KCIGEAKRRFVANIPGYKVVIIDKNGYRKLNDV 194
>gi|67598498|ref|XP_666223.1| 20S proteasome beta subunit D2 (PBD2) [Cryptosporidium hominis
TU502]
gi|54657181|gb|EAL35998.1| 20S proteasome beta subunit D2 (PBD2) [Cryptosporidium hominis]
Length = 83
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 11 VQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGP 70
+QF E+I N+ LY++RNG +LS A A +TR +LAE LRS P+N N+LI G+ EEG
Sbjct: 1 MQFGEYIKCNLNLYRLRNGVQLSTTATANFTRNELAELLRS-DPHNVNILIGGYTKEEGA 59
Query: 71 QLFFIDYLASLIEIPYITHGY 91
+L+++D LASL + HGY
Sbjct: 60 KLYWMDELASLGNVNNAAHGY 80
>gi|414872239|tpg|DAA50796.1| TPA: hypothetical protein ZEAMMB73_385311, partial [Zea mays]
Length = 142
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M +G+ GD VQF EFI KN+ LY+ RN LS AAA +TR +LA LR ++PY N++
Sbjct: 44 MGASGEPGDRVQFTEFIQKNLHLYQFRNTIPLSTAAAANFTRGELATALR-KNPYMVNII 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYI 87
+ G+D + G L++IDY+A+L +I +
Sbjct: 103 LGGYDKDVGASLYYIDYIATLHKIDKV 129
>gi|154345458|ref|XP_001568666.1| putative proteasome beta 2 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066008|emb|CAM43792.1| putative proteasome beta 2 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 206
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 26/161 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSR-SPYNCN 58
+A G++G V F E+I N+ L +MR +G S + A + R LA LRSR Y N
Sbjct: 45 VACIGENGPRVNFTEYIKCNLALNRMRQHGRHSSCESTANFMRNSLASALRSREGAYQVN 104
Query: 59 MLIAGHD--------PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----- 105
L AG+D GPQLF++DYL +L +P+ HGY S++ R
Sbjct: 105 CLFAGYDVPVSEDDDGAAGPQLFYMDYLGTLQAVPFGCHGYGASFVTSLLDRLWRPDLTE 164
Query: 106 -----------SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
EV++R++I+ +F V V+K+G++ + +
Sbjct: 165 QEGLELMQKCCDEVKRRVVISNAHFFVKAVTKNGVEVISAV 205
>gi|157876510|ref|XP_001686602.1| putative proteasome beta 2 subunit [Leishmania major strain
Friedlin]
gi|68129677|emb|CAJ08983.1| putative proteasome beta 2 subunit [Leishmania major strain
Friedlin]
Length = 206
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 26/161 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSR-SPYNCN 58
+A TG++G V F E++ +N+ L +MR +G S + A + R LA +RSR Y +
Sbjct: 45 VACTGENGPRVNFTEYVKRNLMLNRMRQHGRHSSCDSTANFMRNCLASAIRSREGAYQVS 104
Query: 59 MLIAGHD---PEE-----GPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----- 105
L AG+D E+ GPQLF++DYL +L +PY HGY +++ R
Sbjct: 105 CLFAGYDMPVSEDDNGAVGPQLFYLDYLGTLQAVPYGCHGYGACFVTALLDCLWRPDLTQ 164
Query: 106 -----------SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
EV++R++I+ +F V V+K+G++ + +
Sbjct: 165 QEGLELMQKCCDEVKRRVVISNSHFFVKAVTKNGVEVITAV 205
>gi|325179900|emb|CCA14302.1| proteasome subunit beta type2 putative [Albugo laibachii Nc14]
Length = 207
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 32/160 (20%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
G D V+F+E+I KN++LY++RNG L A A Y R +LA YLR + PY N+L+
Sbjct: 47 AGPQSDRVEFSEYIQKNLKLYELRNGVRLDGSATANYIRGELARYLR-QGPYQVNLLVGA 105
Query: 64 HD----------PEEG-----PQLFFIDYLASLIEIPYITHGYPGIVTLSIMG-EYH--- 104
D PE+ P L +IDYL S++++ Y HGY LSI+ E+
Sbjct: 106 VDQVSKAEAQLTPEKAAGTPIPSLHWIDYLGSMVKMDYGVHGYGSNFCLSILDKEWQPNL 165
Query: 105 ------------RSEVQKRLIINVPNFKVTMVSKDGIKHL 132
R+E+ R ++ + ++ +GI+ +
Sbjct: 166 TLEEATRILKLCRNELDTRFLVRSGKWIFKVIDGNGIREV 205
>gi|389585144|dbj|GAB67875.1| 20S proteasome beta 4 subunit [Plasmodium cynomolgi strain B]
Length = 215
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 37/166 (22%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ + G GD +QF EFI KN+ LY+ +N ++ ++ A++TRK LA YLR R+PY N L
Sbjct: 45 LLLGGSIGDRIQFGEFIRKNVHLYQYQNSTDMFVKSFAFFTRKNLAYYLR-RNPYEVNCL 103
Query: 61 IAGHDP--------------------EEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM 100
IAG+D ++G QL++ DYL+++ + HGY + I+
Sbjct: 104 IAGYDNVGKEASLRLRGVGVEKVTVYKDGYQLYWCDYLSNMDAVNKGAHGYGAYLVNGIL 163
Query: 101 GEYHR----------------SEVQKRLIINVPNFKVTMVSKDGIK 130
+Y+ E++KR ++ N+++ +++ + ++
Sbjct: 164 DKYYHENMNLEEALLIFKKCFEELKKRFLLTQINYELRIMTDNKVE 209
>gi|146103498|ref|XP_001469574.1| putative proteasome beta 2 subunit [Leishmania infantum JPCM5]
gi|398023980|ref|XP_003865151.1| proteasome beta 2 subunit, putative [Leishmania donovani]
gi|134073944|emb|CAM72684.1| putative proteasome beta 2 subunit [Leishmania infantum JPCM5]
gi|322503388|emb|CBZ38472.1| proteasome beta 2 subunit, putative [Leishmania donovani]
Length = 206
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 26/161 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSR-SPYNCN 58
+A TG++G V F E++ N+ L +MR +G S + A + R LA +RSR Y N
Sbjct: 45 IACTGENGPRVNFTEYVKCNLMLNRMRQHGRHSSCDSTANFMRNCLASAIRSREGAYQVN 104
Query: 59 MLIAGHD---PEE-----GPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----- 105
L AG+D E+ GPQLF++DYL +L +PY HGY +++ R
Sbjct: 105 CLFAGYDMPVSEDDDGAVGPQLFYLDYLGTLQAVPYGCHGYGACFVTALLDCLWRPDLTQ 164
Query: 106 -----------SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
EV++R++I+ F V V+K+G++ + +
Sbjct: 165 QEGLELMQKCCDEVKRRVVISNSYFFVKAVTKNGVEVITAV 205
>gi|340057082|emb|CCC51424.1| putative proteasome beta 2 subunit, fragment [Trypanosoma vivax
Y486]
Length = 206
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 26/161 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRS-PYNCN 58
+A G++G V F ++I N+ L +MR +G +S +A A++ R L+ LRSR Y N
Sbjct: 45 VACAGENGPRVNFVDYIKCNLALKRMREHGRSISTQATAHFMRNTLSGALRSRGGAYLVN 104
Query: 59 MLIAGHDPE--------EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----- 105
L+AG+D E +G L+++DYL ++ E+PY HGY +++ R
Sbjct: 105 CLLAGYDAETSADDDSVKGTHLYYLDYLGTMQEVPYGCHGYGAAFVTAMLDRLWRPNLTS 164
Query: 106 -----------SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
EV+KR++I+ F V+ +GI+ + +
Sbjct: 165 QEGAELMQMCCDEVKKRVVISNDKFICKAVTSNGIELVETV 205
>gi|195117638|ref|XP_002003354.1| GI17867 [Drosophila mojavensis]
gi|193913929|gb|EDW12796.1| GI17867 [Drosophila mojavensis]
Length = 214
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 16/148 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ V G+ GD+ +FA+FIA + LY++ NGY + ++ R+ L L SR + +ML
Sbjct: 44 VGVIGNEGDSTKFADFIATRVSLYEIANGYSMDTPIVTHFARQHLLSSLASRIKFVVSML 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+A D + G L +ID + + Y G V++SI R
Sbjct: 104 VACFDTKRGASLCYIDSKGASQYLNYSGQGIGNSVSMSIFHTMWRPDLSIEDGLAIVRRC 163
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHL 132
+E+Q RLI+N +F++ ++ K+G++ L
Sbjct: 164 VTEIQSRLIVNFRHFEIFLLDKNGVRKL 191
>gi|253743089|gb|EES99619.1| Proteasome subunit beta type 2 [Giardia intestinalis ATCC 50581]
Length = 165
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M VTG+ GD +QF ++I +++L +R GY+ + +++A + R +LA +R PYN ++
Sbjct: 1 MIVTGEDGDVLQFTDYIKHSLKLRALRQGYKPTVKSSANFVRTELARAIR-EGPYNVYVI 59
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKR 111
G D GPQL+++DYL ++ E + GY LS+M EY + ++ K+
Sbjct: 60 TGGVDA-AGPQLYYMDYLGTMGEDNFCVQGYSMYFLLSVMSEYWKPDMTKQ 109
>gi|118376618|ref|XP_001021490.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89303257|gb|EAS01245.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 191
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 18/148 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA++G+ +QF+++IAKNI L K RNG E + + A + R +LA +R+ P+ N L
Sbjct: 44 MALSGEQAYRLQFSDYIAKNIALNKYRNGTEFNTKECAEFVRSELAYGIRN-GPFMVNCL 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
IAG D + PQL+++DY+ +L++ HGY LS + ++
Sbjct: 103 IAGFDNNQ-PQLYWVDYMGTLVKSVKAAHGYAAHFVLSTLDHDYKPNLTLDEGIAIIKRC 161
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHL 132
+E++ R +I+ +F +V+ GI+ L
Sbjct: 162 INELKTRFLISQSHFIAKIVTPAGIQVL 189
>gi|159112684|ref|XP_001706570.1| Proteasome subunit beta type 2 [Giardia lamblia ATCC 50803]
gi|157434668|gb|EDO78896.1| Proteasome subunit beta type 2 [Giardia lamblia ATCC 50803]
Length = 209
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M VTG+ GD +QF ++I +++L +R GY + +++A + R +LA +R PYN ++
Sbjct: 44 MIVTGEDGDVLQFTDYIKHSLKLRSLRQGYTPTVKSSANFIRTELARAIR-EGPYNVYVI 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKR 111
G D GPQL+++DYL ++ E + GY LS+M EY + ++ K+
Sbjct: 103 TGGVDA-AGPQLYYMDYLGTMGEDNFCVQGYSMYFLLSVMSEYWKPDMTKQ 152
>gi|308160864|gb|EFO63331.1| Proteasome subunit beta type 2 [Giardia lamblia P15]
Length = 209
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M VTG+ GD +QF ++I +++L +R GY + +++A + R +LA +R PYN ++
Sbjct: 44 MIVTGEDGDVLQFTDYIKHSLKLRSLRQGYTPTVKSSANFIRTELARAIR-EGPYNVYVI 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKR 111
G D GPQL+++DYL ++ E + GY LS+M EY + ++ K+
Sbjct: 103 TGGVDA-AGPQLYYMDYLGTMGEDNFCVQGYSMYFLLSVMSEYWKPDMTKQ 152
>gi|407397527|gb|EKF27791.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi marinkellei]
Length = 206
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 26/161 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRS-PYNCN 58
+A TG++G V F E+I N+ L +MR +G + AAA + R LA +RSR Y N
Sbjct: 45 VACTGENGPRVNFVEYIKCNMALKRMREHGRVIRTSAAASFMRNALAGAIRSRDGAYLVN 104
Query: 59 MLIAGHDPE--------EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----- 105
L+AG+D GP L+++DYL ++ E+PY HGY ++++ R
Sbjct: 105 CLLAGYDVAASSEDDIATGPHLYYMDYLGTMQEVPYGCHGYGASFVIAMLDRLWRPDLTA 164
Query: 106 -----------SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
EV+KR++I+ F V+++G++ + +
Sbjct: 165 QEAVDLMQKCCDEVKKRVVISNDKFICKAVTENGVELVNTV 205
>gi|401419770|ref|XP_003874374.1| putative proteasome beta 2 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490610|emb|CBZ25871.1| putative proteasome beta 2 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 206
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 82/161 (50%), Gaps = 26/161 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSR-SPYNCN 58
+A TG++G V F E++ N+ L +MR +G S + A + R LA +RSR Y +
Sbjct: 45 VACTGENGPRVNFTEYVKCNLMLNRMRQHGRHSSCDSTANFMRNCLASAIRSREGAYQVS 104
Query: 59 MLIAGHD---PEE-----GPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----- 105
L AG+D E+ GPQLF++DYL +L +PY HGY +++ R
Sbjct: 105 CLFAGYDMPVSEDDDGAVGPQLFYLDYLGTLQAVPYGCHGYGACFVTALLDCLWRPDLTQ 164
Query: 106 -----------SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
EV++R++I+ F V V+K+G++ + +
Sbjct: 165 QEGLELMQKCCDEVKRRVVISNAFFFVKAVTKNGVEVITTV 205
>gi|342184148|emb|CCC93629.1| 20S proteasome subunit [Trypanosoma congolense IL3000]
Length = 206
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 26/161 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRS-PYNCN 58
+A G++G V F E++ N+ L KMR +G +S A A + R LA LRSR Y N
Sbjct: 45 VACVGENGPRVHFVEYVKCNMALKKMRAHGRLISTHATASFMRNTLAGALRSRGGAYAVN 104
Query: 59 MLIAGHD--------PEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS---- 106
L+ G+D G L+++DYL + E+PY HGY ++++ RS
Sbjct: 105 CLLGGYDVPASADDDEATGAHLYYLDYLGTSQEVPYGCHGYGASFVIAMLDRLWRSNLTA 164
Query: 107 ------------EVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
EV+KR++I+ F V+K+G++ + +
Sbjct: 165 QEGIELMQKCCDEVRKRVVISNDKFICKAVTKNGVERVHGV 205
>gi|71406250|ref|XP_805679.1| proteasome beta 2 subunit [Trypanosoma cruzi strain CL Brener]
gi|71415362|ref|XP_809750.1| proteasome beta 2 subunit [Trypanosoma cruzi strain CL Brener]
gi|70869178|gb|EAN83828.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
gi|70874180|gb|EAN87899.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
Length = 206
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 26/161 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRS-PYNCN 58
+A G++G V F E+I N+ L +MR +G + AAA + R LA LRSR Y N
Sbjct: 45 VACAGENGPRVNFVEYIKCNMALKRMREHGRVIRTSAAASFMRNALAGALRSRDGAYLVN 104
Query: 59 MLIAGHDPE--------EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----- 105
L+AG+D GP L+++DYL ++ E+PY HGY ++++ R
Sbjct: 105 CLLAGYDVAASSDDDIATGPHLYYMDYLGTMQEVPYGCHGYGASFVIAMLDRLWRPDLTA 164
Query: 106 -----------SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
EV+KR++I+ F V+++G++ + +
Sbjct: 165 QEAVDLMQKCCDEVKKRVVISNDKFICKAVTENGVELVNTV 205
>gi|407843693|gb|EKG01568.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
Length = 206
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 26/156 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRS-PYNCN 58
+A G++G V F E+I N+ L +MR +G + AAA + R LA LRSR Y N
Sbjct: 45 VACAGENGPRVNFVEYIKCNMALKRMREHGRVIRTSAAASFMRNALAGALRSRDGAYLVN 104
Query: 59 MLIAGHDPE--------EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----- 105
L+AG+D GP L+++DYL ++ E+PY HGY ++++ R
Sbjct: 105 CLLAGYDVAASSDDDIATGPHLYYMDYLGTMQEVPYGCHGYGASFVIAMLDRLWRPDLTA 164
Query: 106 -----------SEVQKRLIINVPNFKVTMVSKDGIK 130
EV+KR++I+ F V+++G++
Sbjct: 165 QEAVDLMQKCCDEVKKRVVISNDKFICKAVTENGVE 200
>gi|71747326|ref|XP_822718.1| proteasome subunit beta 2 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832386|gb|EAN77890.1| proteasome beta 2 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332493|emb|CBH15488.1| 20S proteasome subunit [Trypanosoma brucei gambiense DAL972]
Length = 206
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 30/163 (18%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRS---PYN 56
+A G++G F E++ N+ L KMR +G +S A A + R LA LRSR P N
Sbjct: 45 VACAGENGPRTHFVEYVKCNMALKKMREHGRMISTHATASFMRNTLAGALRSRDGLYPVN 104
Query: 57 CNMLIAG--------HDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--- 105
C L+AG D G L+++DYL +L E+PY HGY +++ R
Sbjct: 105 C--LLAGFDVPASAEDDVATGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMWRPNL 162
Query: 106 -------------SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
EV+KR++++ F V+KDG++ + +
Sbjct: 163 TAQEGVELMQKCCDEVKKRVVVSNNTFICKAVTKDGVERVQSV 205
>gi|198450366|ref|XP_002137083.1| GA26779 [Drosophila pseudoobscura pseudoobscura]
gi|198131005|gb|EDY67641.1| GA26779 [Drosophila pseudoobscura pseudoobscura]
Length = 208
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 17/157 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
+A G+ GD +F FIA+++ L++++ NG S R+ A++ KQ+ + + + +
Sbjct: 44 IAAAGNGGDPQRFMSFIARHMALHRVQHNGQSPSVRSMAHFAGKQIYSSVNANLNFKVSA 103
Query: 60 LIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGE-----------YH---- 104
LIAG DP GPQL ID L+ +PY G V SI + YH
Sbjct: 104 LIAGWDPRGGPQLHQIDEFGGLVSVPYSGQGLGLPVFNSIFQKDYSPDIDEPTAYHVLKK 163
Query: 105 -RSEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
+ V +R+++N+ NF+V +V ++GI L I A ++
Sbjct: 164 CVAAVHERVVLNMRNFEVFVVKENGITELEAINADSL 200
>gi|195165880|ref|XP_002023766.1| GL27233 [Drosophila persimilis]
gi|194105926|gb|EDW27969.1| GL27233 [Drosophila persimilis]
Length = 208
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 17/157 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
+A G+ GD +F IA+++ L++++ NG S R+ A++ KQ+ + + + +
Sbjct: 44 IAAAGNGGDPQRFMSLIARHMALHRVQHNGQSPSVRSMAHFAGKQIYSSVNANLNFKVSA 103
Query: 60 LIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGE-----------YH---- 104
LIAG DP+ GPQL ID L+ +PY G V SI + YH
Sbjct: 104 LIAGWDPQAGPQLHQIDEFGGLVSVPYSGQGLGLPVFNSIFQKDYSPDIDEPTAYHVLKK 163
Query: 105 -RSEVQKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
+ V +R+++N+ NF+V +V +GI L I A ++
Sbjct: 164 CVAAVHERVVLNMRNFEVFVVKANGITELEAINADSL 200
>gi|17380219|sp|Q9NHC6.1|PSB2_TRYBB RecName: Full=Proteasome subunit beta type-2; AltName: Full=20S
proteasome subunit beta-4
gi|7141310|gb|AAF37284.1|AF226673_1 20S proteasome beta 4 subunit [Trypanosoma brucei]
Length = 206
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 30/163 (18%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMR-NGYELSPRAAAYYTRKQLAEYLRSRS---PYN 56
+A G++G F E++ N+ L KMR +G +S A A + R LA LRSR P N
Sbjct: 45 VACAGENGPRTHFVEYVKCNMALKKMREHGRMISTHATASFMRNTLAGALRSRDGLYPVN 104
Query: 57 CNMLIAG--------HDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--- 105
C L+AG D G L+++DYL +L E+PY HGY +++ R
Sbjct: 105 C--LLAGFDVPASAEDDVATGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMWRPNL 162
Query: 106 -------------SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
EV KR++++ F V KDG++ + +
Sbjct: 163 TAQEGVELMQKCCDEVNKRVVVSNNTFICKAVPKDGVERVQSV 205
>gi|154299945|ref|XP_001550390.1| hypothetical protein BC1G_10863 [Botryotinia fuckeliana B05.10]
Length = 184
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 43/148 (29%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA +G++GDT+QFAE+I N QLY MRN +L PY +
Sbjct: 53 MAFSGEAGDTIQFAEYIQANAQLYSMRNNIDL---------------------PYAIDR- 90
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ L+++DYLASL +PY HGY LSI+ ++H
Sbjct: 91 -----RKSVLSLYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDIDFEQGMKVLRMC 145
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+++RL I+ V +++K+GIK L
Sbjct: 146 TDELKRRLPIDFKGMTVKVITKEGIKEL 173
>gi|440300991|gb|ELP93438.1| proteasome subunit beta type-2-A, putative [Entamoeba invadens IP1]
Length = 219
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 25/156 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA+ G++ D A+F+ +NI L RNG + + + A++ R++++E LR + Y C++L
Sbjct: 65 MAIVGEANDRQALADFVQRNIALNYYRNGLKSTTSSVAHWVRQEMSENLR-KGKYQCSVL 123
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGE-YHR-------------- 105
I G D E P+L+ +D L +L++ Y HG L+++ + +H+
Sbjct: 124 IGGVD--EAPELYLVDQLGALVQENYAAHGVGSHFVLALLDKHWHQDMEYQEALQLLEKC 181
Query: 106 -SEVQKRLIINVPNFKVTMVSKD------GIKHLPP 134
E+++R++++ + V KD G K PP
Sbjct: 182 IDEIKRRVLVSSSEYCVEACFKDKTVTIKGPKPFPP 217
>gi|444708462|gb|ELW49525.1| Proteasome subunit beta type-2 [Tupaia chinensis]
Length = 159
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 16/97 (16%)
Query: 52 RSPYNCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR------ 105
R+PY+ N+ +AG+ EGP L+ +D L +L + P++ HGY +TLSI+ Y+
Sbjct: 53 RTPYHVNLFLAGYGQHEGPALYHVDCLVALAKAPFMAHGYGAFLTLSILDRYYSPTLSHE 112
Query: 106 ----------SEVQKRLIINVPNFKVTMVSKDGIKHL 132
E+QKR I+N+P F + ++ K+GI L
Sbjct: 113 RAMELLRKCLEELQKRFILNLPTFSIRIIDKNGIHDL 149
>gi|86279680|gb|ABC94495.1| hypothetical protein [Ictalurus punctatus]
Length = 48
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 25 KMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQL 72
KMRNGYELSP AAA +TRK LA+YLRSR+PY+ N+L+AG+D +GP L
Sbjct: 1 KMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDETDGPAL 48
>gi|324539620|gb|ADY49570.1| Proteasome subunit beta type-2 [Ascaris suum]
Length = 87
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M G+ GD QF ++ +NIQLYK+R GYE+SPR+ ++ R+ ++E LRS Y + L
Sbjct: 1 MLCIGEDGDVAQFGDWSKRNIQLYKLRYGYEMSPRSCHHWIRRSISESLRSEDYYIVDTL 60
Query: 61 IAGHDP-EEGPQLFFIDYLAS 80
I G+D E+ L +DYL +
Sbjct: 61 IGGYDEFEKKAFLGSVDYLGN 81
>gi|145513030|ref|XP_001442426.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409779|emb|CAK75029.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSR-SPYNCNM 59
++G+ D F E + KN L + + G ++ + A++ R A+ +RSR P+ CN
Sbjct: 44 FGISGEGADRNSFGEIVHKNHCLIRYKTGGYMNLQETAHFVRSMYAQAIRSRDGPHQCNG 103
Query: 60 LIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
L+ G D + P L+++DYL SL +I GY L ++ ++
Sbjct: 104 LLGGVDSDGTPSLYWLDYLGSLQKITRGAQGYANYFLLGLLDNQYKPNLTKEEGIEIIKK 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
E+Q R +I F V +V+K GI+
Sbjct: 164 CIKELQTRFLIAQNKFIVKIVTKQGIE 190
>gi|145534101|ref|XP_001452795.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420494|emb|CAK85398.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSR-SPYNCNM 59
++G+ D F E + KN L + + G ++ + A++ R A+ +RSR P+ CN
Sbjct: 44 FGISGEGADRNSFGEIVHKNHCLIRYKTGGYMNLQETAHFVRSMYAQAIRSRDGPHQCNG 103
Query: 60 LIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR-------------- 105
L+ G D + P L+++DYL SL +I GY L ++ ++
Sbjct: 104 LLGGVDSDGTPSLYWLDYLGSLQKITRGAQGYANYFLLGLLDNQYKPNLIKEEGIEIIKK 163
Query: 106 --SEVQKRLIINVPNFKVTMVSKDGIK 130
E+Q R +I F V +V+K GI+
Sbjct: 164 CIKELQTRFLIAQNKFIVKIVTKQGIE 190
>gi|330040497|ref|XP_003239935.1| 26S proteasome chain protein [Cryptomonas paramecium]
gi|327206861|gb|AEA39037.1| 26S proteasome chain protein [Cryptomonas paramecium]
Length = 193
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 17/151 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ V G GD F +FI K I Y ++N LS + A + RK++++ R+ SP+ +ML
Sbjct: 44 LVVNGYPGDIGYFTDFIHKAILFYTLKNRAYLSTHSIANFIRKEISDCFRN-SPFKISML 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR--------------- 105
+ G D GP L+FIDY + + GY S + + +
Sbjct: 103 LIGFDVGMGPSLYFIDYTGVIQRTNFYVQGYASFFLFSFLDKKFKYNMKIEEALLIVIWC 162
Query: 106 -SEVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
+ ++KR + N NF V + +G K++ +
Sbjct: 163 ITILKKRFVFNQVNFMVKTIDLNGSKNIGLV 193
>gi|294936022|ref|XP_002781593.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
gi|239892458|gb|EER13388.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
Length = 115
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G D+ QF EFI++N++LY + NG +L+ A A +TR +LA+ LR + PY NML
Sbjct: 45 VAAAGPQADSSQFLEFISRNVELYALVNGIQLTTHALASFTRNELADALR-KGPYQVNML 103
Query: 61 IAGHDPEEGP 70
I G+D ++G
Sbjct: 104 IGGYDDKDGS 113
>gi|67470953|ref|XP_651433.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|167382427|ref|XP_001736097.1| proteasome subunit beta type [Entamoeba dispar SAW760]
gi|56468166|gb|EAL46047.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|165901536|gb|EDR27614.1| proteasome subunit beta type, putative [Entamoeba dispar SAW760]
gi|407034757|gb|EKE37377.1| proteasome subunit beta type 2, putative [Entamoeba nuttalli P19]
gi|449703462|gb|EMD43907.1| proteasome subunit beta type, putative [Entamoeba histolytica KU27]
Length = 198
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 19/143 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ + G+ D A+F+ +NI L RNG + + ++ A++ R+Q+++ LR Y C+ML
Sbjct: 44 LTIIGEGNDRQVLADFVQRNIALNYYRNGLKSTTQSIAHWIRRQVSDSLR-EGGYQCSML 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-------------- 106
+ G D E P+LF ID +L+ Y +HG +++ + S
Sbjct: 103 LGGVD--EKPELFMIDQFGTLVPETYASHGIGSNFVYALLDKNWHSGMEFEEALELMKKC 160
Query: 107 --EVQKRLIINVPNFKVTMVSKD 127
E+QKR+I++ ++ + + KD
Sbjct: 161 IKEIQKRVIVSSSHYCIEVCYKD 183
>gi|294936013|ref|XP_002781591.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
gi|239892451|gb|EER13386.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
Length = 112
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G D+ QF EFI++N++LY + NG +L+ A A +TR +LA+ LR + PY NML
Sbjct: 45 VAAAGPQADSNQFLEFISRNVELYALVNGIQLTTHALANFTRNELADALR-KGPYQVNML 103
Query: 61 IAGHDPEEG 69
I G+D ++G
Sbjct: 104 IGGYDDKDG 112
>gi|183212415|gb|ACC54870.1| proteasome subunit beta type 2 [Xenopus borealis]
Length = 43
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/41 (73%), Positives = 36/41 (87%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQL 45
G++GDTVQ AE+I KN+QLYKMRNGYELSP AAA +TR+ L
Sbjct: 3 GEAGDTVQXAEYIQKNVQLYKMRNGYELSPTAAANFTRRNL 43
>gi|396081828|gb|AFN83442.1| proteasome subunit beta-type 2 [Encephalitozoon romaleae SJ-2008]
Length = 197
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 20/152 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M+V GD GD + ++++ + +++NG E+SP A+ + ++ E LR R + + +
Sbjct: 44 MSVVGDQGDAFRTMLNVSESARYEEIQNGIEISPSVLAHMIQNKVHESLRKR-QLDASTI 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV------------ 108
IAG P EG L+ +D ++ +P+ GY I+ + +
Sbjct: 103 IAGKGP-EGYDLWSVDRYGAISSVPFCASGYAAYFVYGILDREYSENITIDDALKIIQKC 161
Query: 109 ----QKRLIINVPNFKVTMVSKDGI--KHLPP 134
++RLIIN+ F + +V+ DG+ K L P
Sbjct: 162 INLLKERLIINLEGFMIKIVTDDGVLTKTLAP 193
>gi|162606464|ref|XP_001713262.1| 26S proteasome chain protein [Guillardia theta]
gi|12580728|emb|CAC27046.1| 26S proteasome chain protein [Guillardia theta]
Length = 193
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ V+G GD +F EFI K+IQ Y ++N +LS + A + R +L + LR ++P N++
Sbjct: 44 LLVSGIPGDVSKFLEFIQKSIQFYVLKNNSKLSNHSIANFIRFELWKSLR-KNPIKINLI 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQK---------- 110
+ G D G L+ +D+ SL+ + Y G + S + + + +
Sbjct: 103 LFGIDKIFGTSLYALDHYGSLLRLNYCVKGMGSSLIYSFLEKSFKDNISSTNSIKLIINC 162
Query: 111 ------RLIINVPNFKVTMVS 125
R I+N F V ++S
Sbjct: 163 IKIIKKRFILNTTKFFVKVIS 183
>gi|357450661|ref|XP_003595607.1| Proteasome subunit beta type [Medicago truncatula]
gi|355484655|gb|AES65858.1| Proteasome subunit beta type [Medicago truncatula]
Length = 108
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 16/94 (17%)
Query: 53 SPYNCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------ 106
+PY+ N+L+AG+D E GP L++IDY+A+L ++ GY +L +M ++ S
Sbjct: 2 NPYSVNILLAGYDKETGPSLYYIDYIATLHKLEKGAFGYGSYFSLLMMDKHFHSGMNVEE 61
Query: 107 ----------EVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ PNF + +V KDG +
Sbjct: 62 AIDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 95
>gi|19173354|ref|NP_597157.1| PROTEASOME BETA-TYPE COMPONENT C7-1 [Encephalitozoon cuniculi
GB-M1]
gi|74630115|sp|Q8SRF1.1|PSB4_ENCCU RecName: Full=Probable proteasome subunit beta type-4; AltName:
Full=26S proteasome beta-type subunit PRE1; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE1
gi|19170943|emb|CAD26333.1| PROTEASOME BETA-TYPE COMPONENT C7-1 [Encephalitozoon cuniculi
GB-M1]
Length = 197
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 21/156 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA+TG+ GD + +++++ +++NG ELSP A+ + ++ E LR R + + +
Sbjct: 44 MAMTGNQGDAFRTMLYVSESALYEEIQNGIELSPSVLAHMIQNKVHESLR-RRQLDISSI 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV------------ 108
+AG PE+ L+ +D ++ +P+ GY I+ + ++
Sbjct: 103 VAGRGPEK-YDLWSVDKYGAISSVPFCASGYAAYFVYGILDREYSEDITIDAALSIMQKC 161
Query: 109 ----QKRLIINVPNFKVTMVSKDGI---KHLPPIKA 137
++RL+IN+ F V +V+ DGI +P IK
Sbjct: 162 VNLLKERLMINLEGFMVKIVTDDGILTRTLVPEIKG 197
>gi|449328867|gb|AGE95143.1| proteasome beta-type component c7-1 [Encephalitozoon cuniculi]
Length = 197
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 21/156 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA+TG+ GD + +++++ +++NG ELSP A+ + ++ E LR R + + +
Sbjct: 44 MAMTGNQGDAFRTMLYVSESALYEEIQNGIELSPSVLAHMIQNKVHESLR-RRQLDMSSI 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV------------ 108
+AG PE+ L+ +D ++ +P+ GY I+ + ++
Sbjct: 103 VAGRGPEK-YDLWSVDKYGAISSVPFCASGYAAYFVYGILDREYSEDITIDAALSIMQKC 161
Query: 109 ----QKRLIINVPNFKVTMVSKDGI---KHLPPIKA 137
++RL+IN+ F V +V+ DGI +P IK
Sbjct: 162 VNLLKERLMINLEGFMVKIVTDDGILTRTLVPEIKG 197
>gi|298706363|emb|CBJ29372.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1328
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 18/153 (11%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +GD GD F E++ +N QL ++ + + R A++ R+ LA+ LR +
Sbjct: 71 VAASGDQGDVEMFVEWLKRNAQLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTA 130
Query: 61 IAGHDPEEG--PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS------------ 106
+ G E P+LF++D L +L ++ + HG LS++ R
Sbjct: 131 LLGGWNEVAWQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLME 190
Query: 107 ----EVQKRLIINVPNFKVTMVSKDGIKHLPPI 135
++++R +++ F + +V KDG + + I
Sbjct: 191 TCFRQLERRYLVSSVGFSMKVVDKDGCRDVACI 223
>gi|401827228|ref|XP_003887706.1| proteasome subunit beta type-2 [Encephalitozoon hellem ATCC 50504]
gi|392998713|gb|AFM98725.1| proteasome subunit beta type-2 [Encephalitozoon hellem ATCC 50504]
Length = 197
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 20/152 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M++ GD GD + ++++ Q +++NG ELSP A+ + ++ E LR R + + +
Sbjct: 44 MSIVGDQGDAFRTILSVSESAQYEEIQNGIELSPSVLAHMVQSKVHESLRKR-QLDTSTI 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV------------ 108
IAG P +G L+ +D ++ +P+ GY I+ + ++
Sbjct: 103 IAGKGP-QGYDLWSVDKYGAISSVPFCASGYAAYFVYGILDREYSEDITVDDALRIIQKC 161
Query: 109 ----QKRLIINVPNFKVTMVSKDGI--KHLPP 134
++RL+I + F V +V+ +G+ K L P
Sbjct: 162 INLLKERLVIGLEGFMVKVVTDEGVLTKTLAP 193
>gi|195032037|ref|XP_001988429.1| GH11158 [Drosophila grimshawi]
gi|193904429|gb|EDW03296.1| GH11158 [Drosophila grimshawi]
Length = 397
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M V G+ DT+QF++FIA +I+ Y ++NGY L+ A +++ + LR+R + +L
Sbjct: 1 MGVIGNKSDTLQFSKFIASHIKCYDIQNGYPLNTPAIVHFSCNNVVANLRNRVKHQVALL 60
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHG 90
+ G+D + G L ID S + Y +G
Sbjct: 61 LGGYDNDTGSLLSSIDAQGSSQTLNYAVYG 90
>gi|294940814|ref|XP_002782890.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
gi|239895031|gb|EER14686.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
50983]
Length = 138
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 18/102 (17%)
Query: 42 RKQLAEYLRSRSPYNCNMLIAGHDPEEGP-QLFFIDYLASLIEIPYITHGYPGIVTLSIM 100
R +LA+ LR + PY NMLI G+D ++G L+++DYLAS +I HGY L ++
Sbjct: 31 RNELADALR-KGPYQVNMLIGGYDDKDGSASLYYMDYLASCQKITRGAHGYAAYFVLGLL 89
Query: 101 GEYHR----------------SEVQKRLIINVPNFKVTMVSK 126
+ ++ E +KR II+ NF + V+K
Sbjct: 90 DKLYKKDMTQEEGLDAINQCIKECKKRFIIDKSNFVIKAVNK 131
>gi|303390170|ref|XP_003073316.1| proteasome subunit beta-type 2 [Encephalitozoon intestinalis ATCC
50506]
gi|303302462|gb|ADM11956.1| proteasome subunit beta-type 2 [Encephalitozoon intestinalis ATCC
50506]
Length = 197
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M++ GD GD + +++++ +++NG ELSP A+ + ++ + LR R + + +
Sbjct: 44 MSMIGDQGDAFRTMLYVSESAYYEEIQNGIELSPSVLAHMIQNKVHKALRKR-QLDMSSI 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV------------ 108
+ G P EG L+ +D ++ +P+ +GY I + ++
Sbjct: 103 VGGKGP-EGYDLWSVDRYGAISSVPFCANGYAAYFVYGIFDREYTEDITIDAALNIIQKC 161
Query: 109 ----QKRLIINVPNFKVTMVSKDGIKH---LPPIKA 137
++RL+IN+ F V +V+ DGI P IK+
Sbjct: 162 INLLKERLMINLEGFMVKIVTDDGISTRTLTPEIKS 197
>gi|310656740|gb|ADP02178.1| putative 20S proteasome subunit beta-4 [Triticum aestivum]
Length = 170
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 16/96 (16%)
Query: 51 SRSPYNCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----- 105
R+PY+ N+++AG D + G +++IDY+A+L +I GY LS+M + +R
Sbjct: 52 DRNPYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYRPDMTV 111
Query: 106 -----------SEVQKRLIINVPNFKVTMVSKDGIK 130
E++ RL++ NF + +V KDG +
Sbjct: 112 EEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDKDGAR 147
>gi|414872237|tpg|DAA50794.1| TPA: hypothetical protein ZEAMMB73_385311 [Zea mays]
Length = 119
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 33/50 (66%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLR 50
M +G+ GD VQF EFI KN+ LY+ RN LS AAA +TR +LA LR
Sbjct: 44 MGASGEPGDRVQFTEFIQKNLHLYQFRNTIPLSTAAAANFTRGELATALR 93
>gi|300120657|emb|CBK20211.2| unnamed protein product [Blastocystis hominis]
Length = 124
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 18/111 (16%)
Query: 36 AAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIV 95
A A+ R +A YLR R PY N ++ G D ++ P ++++DYL +L ++ Y +HGYP +
Sbjct: 3 ATAHSFRNTVAYYLR-RQPYQVNFILGGVD-DDVPSIYYLDYLGTLQKMNYASHGYPSYI 60
Query: 96 TLSIMGEYHRS----------------EVQKRLIINVPNFKVTMVSKDGIK 130
L++ + E++ R +N ++ +VSK+GI+
Sbjct: 61 LLALFDRLWKKDMTREEALELCNRCQEEMKGRFPMNEHHYVTKIVSKNGIE 111
>gi|222445334|ref|ZP_03607849.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
DSM 2375]
gi|261350105|ref|ZP_05975522.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
gi|222434899|gb|EEE42064.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobrevibacter smithii DSM 2375]
gi|288860891|gb|EFC93189.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
Length = 204
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 22/154 (14%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G GD + I + LY+MRN ++S +AAA T A LRS P L+
Sbjct: 53 IAGSVGDAQNLMKIIEAEVSLYQMRNNDKMSVKAAASVT----ANILRS-GPMYVQTLLG 107
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV-------------- 108
G D ++ P L+ +D +IE YI+ G IV ++ + + E+
Sbjct: 108 GMDGDK-PSLYSLDPAGGMIEDTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIK 166
Query: 109 --QKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
+R + + V V+KDG + L K +I
Sbjct: 167 AASERDTFSGNGYLVAKVTKDGFEMLDKEKVNDI 200
>gi|148643097|ref|YP_001273610.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
gi|302595842|sp|A5UM14.1|PSB_METS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|148552114|gb|ABQ87242.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
Length = 204
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 22/154 (14%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G GD + I + LY+MRN ++S +AAA T A LRS P L+
Sbjct: 53 IAGSVGDAQNLMKIIEAEVSLYQMRNNDKISVKAAASVT----ANILRS-GPMYVQTLLG 107
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV-------------- 108
G D ++ P L+ +D +IE YI+ G IV ++ + + E+
Sbjct: 108 GMDGDK-PSLYSLDPAGGMIEDTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIK 166
Query: 109 --QKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
+R + + V V+KDG + L K +I
Sbjct: 167 AASERDTFSGNGYLVAKVTKDGFEMLDKEKVNDI 200
>gi|256056346|ref|XP_002570228.1| proteasome subunit beta 2 (T01 family) [Schistosoma mansoni]
Length = 80
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 16/75 (21%)
Query: 84 IPYITHGYPGIVTLSIMGEYHR----------------SEVQKRLIINVPNFKVTMVSKD 127
+P+ HGY +V LSI+ HR EVQKRL+IN+ + V +V+KD
Sbjct: 6 VPFAVHGYGALVALSILDRMHRPDMTVNEAVALLRLCIQEVQKRLVINLDRYMVRIVTKD 65
Query: 128 GIKHLPPIKAKNIPE 142
GI+ LP + + E
Sbjct: 66 GIEELPDLTDFAVKE 80
>gi|70606469|ref|YP_255339.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066683|ref|YP_007433765.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
gi|449068957|ref|YP_007436038.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
gi|121697373|sp|Q4JAY3.1|PSB1_SULAC RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|68567117|gb|AAY80046.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|449035191|gb|AGE70617.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
gi|449037465|gb|AGE72890.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
Length = 195
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G GD + I+ Y+M N ++S RAAA L Y PY +L
Sbjct: 47 IAGAGIVGDIQTLTRIMNVEIKYYEMYNSRKISARAAAKLLSVIL--YQNKVLPYISELL 104
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM-GEYHR---SEVQKRLIINV 116
G D E+GP+LF +D + SLIE Y G V + ++ EY+ SE K L I
Sbjct: 105 FGGVD-EDGPKLFILDPIGSLIEDSYAAVGSGARVAIGVLEAEYNESLTSEAAKELAIKS 163
Query: 117 PNFKV--TMVSKDGIKHLPPIKAKNIPEE 143
V ++S DGI L I NI E+
Sbjct: 164 MKSAVERDVMSGDGIDIL-IINKNNIYED 191
>gi|300706947|ref|XP_002995703.1| hypothetical protein NCER_101331 [Nosema ceranae BRL01]
gi|239604901|gb|EEQ82032.1| hypothetical protein NCER_101331 [Nosema ceranae BRL01]
Length = 193
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 68/147 (46%), Gaps = 18/147 (12%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
GD GD + A F+ + + +++N E++P+ A +K + LRSR P LI G
Sbjct: 48 GDQGDAFRTASFVKEKLIYEEIQNNVEITPKVTANIIQKSIYRSLRSR-PIENYFLIGGL 106
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQK-------------- 110
+ GP+L+ +D S+ E ++ G ++ + + ++ K
Sbjct: 107 -TDNGPELYSVDVYGSMYENNFMAVGIATYFCYGVLDKEYTEDINKDKAIEVLYKCFDVL 165
Query: 111 --RLIINVPNFKVTMVSKDGIKHLPPI 135
R +++ N + ++SK+G++ + +
Sbjct: 166 KERCSVDISNIDIRIISKEGVEVINKV 192
>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
vulcanius M7]
gi|302595760|sp|C9REN7.1|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
Length = 223
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M + G GD + +LYKMR G +SPRA A L+ L S P+
Sbjct: 49 MTIAGSVGDAQAIVRALIAEARLYKMRTGKNISPRACATL----LSNILHSSRMFPFLTQ 104
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPG--IVTLSIMGEYHRS-EVQKRLIIN 115
++I G+D +GP+LF +D L + E T G I + EY R +++ L +
Sbjct: 105 IIIGGYDLTDGPKLFSLDPLGGMNEEKTFTSTGSGSPIAYGVLEAEYDRDMSIEEGLKLA 164
Query: 116 VPNFK--------------VTMVSKDGIKHLP 133
+ K V +++K+G+K L
Sbjct: 165 LKALKSAMERDTYSGNGVSVAVITKEGVKLLS 196
>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
Length = 211
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
V G GD + E++ ++LYK+R G + RAAA L + P+ MLI
Sbjct: 54 VAGSVGDAQKLVEYLKAEVRLYKLRTGKPATVRAAASIASNIL--HASRMFPFIVQMLIG 111
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV------ 116
G D E GP+++ +D IE Y++ G + ++ + ++ ++ IN+
Sbjct: 112 GID-ETGPKIYSVDPAGGKIEDKYVSTGSGSPIAYGVLEDRYKKDMSVEDAINIALRAIK 170
Query: 117 PNFKVTMVSKDGI 129
+ K S DGI
Sbjct: 171 SSTKRDTFSGDGI 183
>gi|224001698|ref|XP_002290521.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973943|gb|EED92273.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 132
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 32 LSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG--HDPEEGPQLFFIDYLASLIEIPYITH 89
L A AY R ++A LRSR P +L+ G +P P+L+++D S+ + Y H
Sbjct: 10 LDTEAVAYLARSEIASSLRSRQPIQLCLLVGGMVRNPFLMPRLYWLDQYGSIQNLKYGAH 69
Query: 90 GYPGIVTLSIMGEYHRS----------------EVQKRLIINVPN-FKVTMVSKDGIKHL 132
G+ LS++ + RS ++++R +IN P ++ + G+K L
Sbjct: 70 GFGSNFALSVLDQRFRSNLSRKEAMELIRECFEQLRQRYVINSPQPPRIKCIDAFGVKEL 129
>gi|126465836|ref|YP_001040945.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595723|sp|A3DN27.1|PSB2_STAMF RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126014659|gb|ABN70037.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 208
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 1 MAVTGDSGDTVQFAE---FIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNC 57
M ++G D AE FIA+ YK+ G + A A L YLR SPY
Sbjct: 52 MTISGLVADAEIIAEQARFIARK---YKLELGRPIKVSALASNLSIILNAYLR-MSPYIV 107
Query: 58 NMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
+L+ G+D + GP LF+ID SL E Y+ G ++ E +RS++
Sbjct: 108 QLLLGGYD-DNGPHLFYIDLFGSLSEEKYMATGSGSPTAFGVLEEEYRSDLS 158
>gi|336121951|ref|YP_004576726.1| proteasome endopeptidase complex subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856472|gb|AEH06948.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
okinawensis IH1]
Length = 220
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G GD I+ ++YKMR G + P + A L + P+ ++
Sbjct: 56 MTIAGSVGDAQSLVRMISAETKIYKMRTGNNMPPHSCATLLSNIL--HGNRHFPFLTQLI 113
Query: 61 IAGHDPEEGPQLFFIDYLASLI-EIPYITHGYPGIVTLSIMGEYHRSEVQKRLIIN 115
I G+D GP+LF +D + L E + + G L ++ +E +K + IN
Sbjct: 114 IGGYDNLHGPKLFSLDPVGGLNEETSFTSTGSGSPTALGVL----EAEYKKDMTIN 165
>gi|375082946|ref|ZP_09729987.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
gi|374742376|gb|EHR78773.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
Length = 204
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G GD + + +LY+ R G E+S +A A T L+ R PY L
Sbjct: 49 LAGAGSVGDILSLVRLLRAEAKLYRARVGREMSTKALATLTSNILSG--RRYFPYFGWFL 106
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHG 90
+AG+D E P L+ ID + E Y++ G
Sbjct: 107 VAGYD--EKPGLYSIDMAGGITEDKYVSAG 134
>gi|390960707|ref|YP_006424541.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
gi|390519015|gb|AFL94747.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
Length = 203
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G GD + + +LY+ R G E+S +A A T L + PY L
Sbjct: 50 LAGAGSVGDILSLVRLLRAEAKLYRARVGKEMSVKALATLTSNVL--HGNRFMPYFGWFL 107
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
IAGHD E P L+ ID + E + G SI+ E +R ++
Sbjct: 108 IAGHD--EKPGLYSIDMAGGVTEDKFTAAGSGMEFAFSILEENYREDM 153
>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
fervens AG86]
gi|302595745|sp|C7P6N4.1|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
fervens AG86]
Length = 224
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+ + G GD + +LYKMR G +SP A A L+ L S P+
Sbjct: 49 LTIAGSVGDAQAIVRLLTAEAKLYKMRTGKNISPLACATL----LSNILHSNRYFPFLTQ 104
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIE 83
++I G+D EG +LF +D L + E
Sbjct: 105 LIIGGYDLLEGAKLFSLDPLGGMNE 129
>gi|15920523|ref|NP_376192.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
gi|74574822|sp|Q975U8.1|PSB1_SULTO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|15621306|dbj|BAB65301.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
Length = 197
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G GD + I+ Y+M N +S +AAA L +Y +P+ +L
Sbjct: 47 IAGAGIMGDIQTLTRLMNVEIKYYEMYNNKPISVKAAAKLLSVILYQY--KWTPFISELL 104
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM-GEYHRS---EVQKRLIINV 116
G D +EGP+LF +D + SLIE Y G V + ++ EY S + K +++
Sbjct: 105 FGGVD-DEGPKLFVLDPIGSLIEDNYAAVGSGARVAIGVLESEYDPSMNLDKGKEIVLKA 163
Query: 117 PNFKV--TMVSKDGIKHLPPIKAKNIPEEN 144
+ + S DGI L IK N E+
Sbjct: 164 LKAAIERDVTSGDGIDIL-TIKRDNTSSED 192
>gi|340381844|ref|XP_003389431.1| PREDICTED: proteasome subunit beta type-7-like [Amphimedon
queenslandica]
Length = 271
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT E I+ +I+L+++ G + PR A + L +YL + L+ G
Sbjct: 84 GTAADTEYTTETISSDIELHRLSTGRK--PRVATAC--RLLKQYLYRYQGHIGAYLVLGG 139
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS-----EVQKRLIINV--- 116
GP LF + S ++PY+T G + +++ E H + E K+L+ +
Sbjct: 140 VDTTGPHLFTVHAHGSTDKLPYVTMGSGSLAAMAVF-ESHYTPNMGVEEGKKLVRDAIAG 198
Query: 117 ---------PNFKVTMVSKDGIKHLPPIKAKNIPEENKG 146
N + +++ DG+ ++ P N+ E G
Sbjct: 199 GIFNDLGSGSNVDLCVITADGVDYIRPYDVANVKGERVG 237
>gi|327311727|ref|YP_004338624.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326948206|gb|AEA13312.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 204
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G D A+ + N ++Y++ + P AA + + R P+ +L
Sbjct: 51 LASAGVIADMQTIAKILRVNAKMYELES--RRKPSIAAMAKLLSVIMFNRRIMPFIAEVL 108
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----KRLIINV 116
+ G+D EEGP +F +D + SLIE Y G + +SI+ + +V ++L IN
Sbjct: 109 VGGYD-EEGPHIFVLDPVGSLIEDDYAALGTGAKMAISILDANYSKDVDVSGARKLAINA 167
Query: 117 PNFKVTM--VSKDGIKHLPPIKAKNIPEE 143
+ VS GI L + A + EE
Sbjct: 168 IRAALERDPVSGGGI-DLVTVTADGVSEE 195
>gi|374636366|ref|ZP_09707939.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
gi|373559248|gb|EHP85553.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
Length = 220
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G GD +++ +LYKMR G + P + A L + P+ ++
Sbjct: 53 MTIAGSVGDAQALVRYVSAEAKLYKMRTGKNIPPLSCATLMSNIL--HGSRMFPFLTQLI 110
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYIT---HGYP---GIVTLSIMGEYHRSEVQK 110
I G+D GP+LF +D + L E Y T G P G++ L EY R + K
Sbjct: 111 IGGYDFLYGPRLFSLDPVGGLNEESYFTATGSGSPTAYGVLEL----EYSRDMLLK 162
>gi|297527490|ref|YP_003669514.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
gi|297256406|gb|ADI32615.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
Length = 210
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 1 MAVTGDSGDTVQFAE---FIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNC 57
M ++G D AE FIA+ YK+ G + A L YLR+ SPY
Sbjct: 54 MTISGLVADAEIIAEQARFIARK---YKLELGRPIKVSGLASNLSIILNTYLRA-SPYIV 109
Query: 58 NMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
+L+ G+D GP LF++D SL E Y+ G ++ E +RS++
Sbjct: 110 QLLLGGYD-NNGPHLFYMDLYGSLSEEKYMATGSGSPTAFGVLEEGYRSDLS 160
>gi|262401169|gb|ACY66487.1| proteasome beta 2 subunit-like protein-like protein [Scylla
paramamosain]
Length = 69
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLY 24
MAV G++GDT QFAE+IAKNIQLY
Sbjct: 46 MAVAGEAGDTTQFAEYIAKNIQLY 69
>gi|255088810|ref|XP_002506327.1| predicted protein [Micromonas sp. RCC299]
gi|226521599|gb|ACO67585.1| predicted protein [Micromonas sp. RCC299]
Length = 82
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAA 38
MA++G GD V F E+I N++LY++RNG +LS AA+
Sbjct: 44 MAMSGPKGDCVYFGEYIQANMKLYELRNGMKLSTHAAS 81
>gi|315139004|ref|NP_001186709.1| proteasome subunit beta type-2 isoform 3 [Homo sapiens]
gi|332248608|ref|XP_003273456.1| PREDICTED: proteasome subunit beta type-2 isoform 5 [Nomascus
leucogenys]
gi|426328919|ref|XP_004025494.1| PREDICTED: proteasome subunit beta type-2 isoform 5 [Gorilla
gorilla gorilla]
Length = 84
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 16/77 (20%)
Query: 75 IDYLASLIEIPYITHGYPGIVTLSIMGEYHR----------------SEVQKRLIINVPN 118
+DYLA+L + P+ HGY +TLSI+ Y+ E+QKR I+N+P
Sbjct: 1 MDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPT 60
Query: 119 FKVTMVSKDGIKHLPPI 135
F V ++ K+GI L I
Sbjct: 61 FSVRIIDKNGIHDLDNI 77
>gi|374633123|ref|ZP_09705490.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
gi|373524607|gb|EHP69484.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
Length = 196
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 8 GDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPE 67
GD + NI+ Y++ NG +S RAAA L +Y P+ +L AG D +
Sbjct: 54 GDLQALTRIMNANIRYYELYNGRPISARAAAKLLSIILYQY--KYMPFISEVLFAGID-D 110
Query: 68 EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM-GEYHRS-EVQKRLIINVPNFKVT--- 122
PQLF +D L SL++ Y G V + ++ EY S + + + + + + +
Sbjct: 111 GTPQLFVLDPLGSLLDDIYAAVGSGARVAIGVLEAEYKDSMNLTQARELALKSLRASVER 170
Query: 123 -MVSKDGIKHLPPIKAKNIPEE 143
+ S DGI L K I EE
Sbjct: 171 DVTSGDGIDLLIIDKNGKISEE 192
>gi|397651896|ref|YP_006492477.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|393189487|gb|AFN04185.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 203
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 57/149 (38%), Gaps = 24/149 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+A GD GD + + LYK G E+S +A A LA L PY
Sbjct: 50 IAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALA----TLLANILNGSKYFPYLGW 105
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ--------- 109
L+ G+D E P+LF +D + + E Y G SI+ +R E+
Sbjct: 106 FLVGGYD--EKPRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAV 163
Query: 110 -------KRLIINVPNFKVTMVSKDGIKH 131
KR + V ++KDG K
Sbjct: 164 KAINVAIKRDVFTGDGLLVVTITKDGYKE 192
>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
gi|302595757|sp|D3S8M7.1|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
Length = 224
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M + G GD + +LYKMR G + P A A L+ L S P+
Sbjct: 49 MTIAGSVGDAQAIVRLLTAEAKLYKMRTGRNIPPLACATL----LSNILHSSRVFPFLTQ 104
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIE 83
++I G+D EG +LF +D L + E
Sbjct: 105 IIIGGYDLLEGAKLFSLDPLGGMNE 129
>gi|18977776|ref|NP_579133.1| proteasome subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|25453238|sp|Q8U125.1|PSB2_PYRFU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18893519|gb|AAL81528.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
Length = 206
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 57/149 (38%), Gaps = 24/149 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+A GD GD + + LYK G E+S +A A LA L PY
Sbjct: 53 IAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALA----TLLANILNGSKYFPYLGW 108
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ--------- 109
L+ G+D E P+LF +D + + E Y G SI+ +R E+
Sbjct: 109 FLVGGYD--EKPRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAV 166
Query: 110 -------KRLIINVPNFKVTMVSKDGIKH 131
KR + V ++KDG K
Sbjct: 167 KAINVAIKRDVFTGDGLLVVTITKDGYKE 195
>gi|410898722|ref|XP_003962846.1| PREDICTED: proteasome subunit alpha type-3-like [Takifugu rubripes]
Length = 255
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D A+ + ++ GY+ LS R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLADVAREEASSFRSSYGYDIPLKHLSERVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ HD ++GPQL+ +D
Sbjct: 133 GCSFILGSHDKDDGPQLYMVD 153
>gi|403293117|ref|XP_003937569.1| PREDICTED: proteasome subunit beta type-2 isoform 4 [Saimiri
boliviensis boliviensis]
Length = 84
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 16/77 (20%)
Query: 75 IDYLASLIEIPYITHGYPGIVTLSIMGEYHR----------------SEVQKRLIINVPN 118
+DYLA+L + P+ HGY +TLSI+ Y+ E+QKR I+N+P
Sbjct: 1 MDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPT 60
Query: 119 FKVTMVSKDGIKHLPPI 135
F V ++ K GI L I
Sbjct: 61 FSVRIIDKSGIHDLDNI 77
>gi|124028413|ref|YP_001013733.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
gi|302595715|sp|A2BN27.1|PSB2_HYPBU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|123979107|gb|ABM81388.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
Length = 212
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M G D AE++A + Y++ N +S AAA Y L+ L S PY
Sbjct: 58 MTTAGLVADAQMLAEWLANHTHYYEIVNKRRMSIHAAAQY----LSIILHSAKFYPYIVQ 113
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHG 90
+L+ G+D + P+L+ ID+ S+ E Y+ G
Sbjct: 114 LLLGGYDTQ--PRLYNIDWFGSVTEEKYVATG 143
>gi|126465830|ref|YP_001040939.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595722|sp|A3DN21.1|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 213
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 14 AEFIAKNIQL----YKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEG 69
A+FI + +++ Y+++ G E+ R A L Y +P +++ G D E+G
Sbjct: 69 AQFIIRALRMEAENYELQLGREIRVRGLAKILSLILYSY--KLAPLMTEVVVGGFD-EKG 125
Query: 70 PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
PQ++ +D + SLIE Y+ G G + L I+ + +R ++
Sbjct: 126 PQIYVLDPVGSLIEDKYVALGSGGPIALGIIEKEYREDID 165
>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
AL-21]
gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. AL-21]
Length = 210
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G D + +I+ + LY++RNG +S AAA T L + PY L+
Sbjct: 54 IAGSVSDAQKLMGYISAEVALYRLRNGAPMSVEAAANMTSNIL--HASRFYPYYVQTLLG 111
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
G D E+GP LF +D +I+ I+ G V ++ + + E+
Sbjct: 112 GVD-EKGPALFSLDPSGGVIKDLMISTGSGSPVAYGVLEDRYNQEMD 157
>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
2661]
gi|2499838|sp|Q58634.1|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
2661]
Length = 224
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M + G GD + +LYKMR G + P A A L+ L S P+
Sbjct: 49 MTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATL----LSNILHSSRMFPFLTQ 104
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPG 93
++I G+D EG +LF +D L + E T G
Sbjct: 105 IIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSG 139
>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 219
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M + G GD + +LYKMR G + P A A L+ L S P+
Sbjct: 44 MTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATL----LSNILHSSRMFPFLTQ 99
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPG 93
++I G+D EG +LF +D L + E T G
Sbjct: 100 IIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSG 134
>gi|352682834|ref|YP_004893358.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275633|emb|CCC82280.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 204
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G D A+ + N ++Y++ + P AA + + R P+ +L
Sbjct: 51 IASAGVIADMQTLAKILRVNAKMYELDA--KRKPSVAAMAKLLSIIMFNRRWMPFIAEVL 108
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----KRLIIN 115
+ G+D EEGP +F +D + SLIE Y G + + I+ ++ ++ ++L IN
Sbjct: 109 VGGYD-EEGPHVFVLDPVGSLIEDDYAALGTGAKMAIGILDSGYKKDIDVVEARKLAIN 166
>gi|150400310|ref|YP_001324077.1| proteasome endopeptidase complex [Methanococcus vannielii SB]
gi|302595790|sp|A6USJ3.1|PSB_METVS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013013|gb|ABR55465.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
Length = 219
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G GD ++ ++YKMR G ++P + T L + P ++
Sbjct: 57 MTIAGSVGDAQSLIRLLSAEAKIYKMRTGNNMTPLSCTTLTSNVL--HGNRHYPLLTQLI 114
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTL-SIMGEYHRSE--VQKRLIINV 116
I G+D GP+LF +D + + E T G T ++ ++SE ++K L+I V
Sbjct: 115 IGGYDLINGPKLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYKSEINIEKGLLIAV 173
>gi|333910183|ref|YP_004483916.1| proteasome subunit beta [Methanotorris igneus Kol 5]
gi|333750772|gb|AEF95851.1| proteasome endopeptidase complex, beta subunit [Methanotorris
igneus Kol 5]
Length = 216
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G GD +++ +LYKMR G + P + A L + P+ ++
Sbjct: 53 MTIAGSVGDAQALVRYVSAEAKLYKMRTGKNIPPLSCATLISNIL--HGNRMFPFLTQLI 110
Query: 61 IAGHDPEEGPQLFFIDYLASLIE 83
I G+D GP+LF +D + L E
Sbjct: 111 IGGYDLLYGPRLFSLDPIGGLNE 133
>gi|315231929|ref|YP_004072365.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315184957|gb|ADT85142.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 181
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQL--AEYLRSRSPYNCN 58
+A G+ GD + + +LY+ R G E+S +A A T L +Y PY
Sbjct: 26 LAGAGNVGDILSLVRMLRAETKLYRARVGREMSVKALATLTANILNGTKYF----PYFGW 81
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHG 90
LI G+D E P L+ +D + E Y++ G
Sbjct: 82 FLIGGYD--EKPNLYSVDMAGGMTEDKYVSAG 111
>gi|164656220|ref|XP_001729238.1| hypothetical protein MGL_3705 [Malassezia globosa CBS 7966]
gi|159103128|gb|EDP42024.1| hypothetical protein MGL_3705 [Malassezia globosa CBS 7966]
Length = 285
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT I+ N+QL+ + AA +++L +Y + +++ G+
Sbjct: 87 GTAADTEFVTNLISSNMQLHALHTRKRPRVLAALTMLKQRLFQY---QGYIGAALVLGGY 143
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV 116
D GPQLF I S ++PY+T G + +S+ R E++++ +N+
Sbjct: 144 DST-GPQLFTIAPHGSTDKLPYVTMGSGSLAAMSVFESAWRPEMEEQEAVNL 194
>gi|242398879|ref|YP_002994303.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
gi|302595703|sp|C6A2V9.1|PSB1_THESM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|242265272|gb|ACS89954.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
Length = 207
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G GD + + +LY+ + G E+S +A A T L+ R PY L
Sbjct: 52 LAGAGAVGDILSLVRALRAESKLYRAKVGKEMSTKALATLTSNILSG--RKYLPYFGWFL 109
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHG 90
I G+D E P L+ ID + E Y++ G
Sbjct: 110 IGGYD--EKPSLYSIDMAGGITEDKYVSAG 137
>gi|315425045|dbj|BAJ46718.1| proteasome endopeptidase complex [Candidatus Caldiarchaeum
subterraneum]
Length = 187
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+AV G D V + +L +R GY LS ++ LR+ PY ++
Sbjct: 44 IAVAGLLSDAVYLVNVVRAERKLIALRRGYPLSVAESSKLISNLFYSGLRNYIPYYAELI 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHG 90
+AG D +EGP +F D S++ +++ G
Sbjct: 104 VAGVD-DEGPHVFSSDMSGSMVAEEFVSSG 132
>gi|156363743|ref|XP_001626200.1| predicted protein [Nematostella vectensis]
gi|156213068|gb|EDO34100.1| predicted protein [Nematostella vectensis]
Length = 249
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 20/158 (12%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ IQL+ + G + + +++L Y Y L+ G
Sbjct: 63 GTAADTEYVTDLISSQIQLHSLNTGRQARIVTSLRMLKQRLFRY----QGYISAALVLGG 118
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----KRLIIN----- 115
GP L + S +PY+T G + +++ +R +++ K+L+ +
Sbjct: 119 VDFSGPHLHTVYPHGSTDSLPYVTMGSGSLAAMAVFESRYRPDMELEEAKQLVRDGIAAG 178
Query: 116 -------VPNFKVTMVSKDGIKHLPPIKAKNIPEENKG 146
N + +++KDG+ ++ P N+ E +G
Sbjct: 179 IFNDLGSGSNVDLCVITKDGVDYIRPYDVANLKGERQG 216
>gi|150400488|ref|YP_001324254.1| proteasome endopeptidase complex protein [Methanococcus aeolicus
Nankai-3]
gi|302595768|sp|A6UT20.1|PSB_META3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013191|gb|ABR55642.1| Proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
Length = 217
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G GD I+ LYK+R G + P + A L + P+ ++
Sbjct: 57 MTIAGSVGDAQSLVRIISAEANLYKLRTGNNIPPHSCAMLLSNVL--HGSRHFPFLIQLI 114
Query: 61 IAGHDPEEGPQLFFIDYLASLIE 83
I G+D G +LF +D + L E
Sbjct: 115 IGGYDTIHGAKLFSLDAVGGLNE 137
>gi|15897221|ref|NP_341826.1| proteasome subunit [Sulfolobus solfataricus P2]
gi|284174466|ref|ZP_06388435.1| proteasome subunit [Sulfolobus solfataricus 98/2]
gi|384433733|ref|YP_005643091.1| proteasome endopeptidase complex subunit beta [Sulfolobus
solfataricus 98/2]
gi|74557429|sp|Q980L4.1|PSB1_SULSO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595697|sp|D0KRX1.1|PSB1_SULS9 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|13813418|gb|AAK40616.1| Proteasome subunit [Sulfolobus solfataricus P2]
gi|261601887|gb|ACX91490.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
solfataricus 98/2]
Length = 196
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA G GD + I+ Y++ G +S AAA L +Y P+ +L
Sbjct: 47 MAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAAAKLLSVILYQY--KVMPFISEIL 104
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM-GEYH---RSEVQKRLIINV 116
G D E+GPQL+ +D + SLIE Y G + + ++ EY +V +LI
Sbjct: 105 FGGVD-EKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMSLDVATQLITKA 163
Query: 117 --PNFKVTMVSKDGIKHLPPIKAKNIPEENKGIP 148
+ + + S DGI K N ENK IP
Sbjct: 164 IKASIERDITSGDGIDLAIIDKKGNY--ENKFIP 195
>gi|315426587|dbj|BAJ48216.1| 20S proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485345|dbj|BAJ50999.1| 20S proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 187
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+AV G D V + +L +R GY LS ++ LR+ PY ++
Sbjct: 44 IAVAGLLSDAVYLVNVVRAERKLIALRRGYPLSVAESSKLISNLFYSGLRNYIPYYAELI 103
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHG 90
+AG D +EGP +F D S++ +++ G
Sbjct: 104 VAGVD-DEGPHVFSSDMSGSMVAEEFVSSG 132
>gi|219118149|ref|XP_002179855.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408908|gb|EEC48841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 283
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
+ G + D + + +LY++RNG ++ AA+ K LA + + Y +M +
Sbjct: 119 MAGGAADCSFWERNLGMECRLYELRNGRRITVAAAS----KLLANVMSAYRGYGLSMGTM 174
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV 116
I G D E GPQL+++D + ++ Y + G + ++ + R ++ I++
Sbjct: 175 ITGWD-ETGPQLYYVDNDGTRLKGKYFSVGSGSMYAYGVLDNHWREDLSVEEAIDL 229
>gi|296242983|ref|YP_003650470.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095567|gb|ADG91518.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 206
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 1 MAVTGDSGDT---VQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNC 57
M ++G D V+ A++IAK+ Y+++ G +S A A L+ YLR SP+
Sbjct: 50 MTISGLVADAQFLVENAKYIAKD---YELKMGKRISIDALASRISLILSAYLRF-SPFIV 105
Query: 58 NMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR 105
+L+ G D EGP+L+++D S+ +++ G V ++ + +R
Sbjct: 106 QLLLGGVD-HEGPKLYYMDLYGSVSRERFMSTGSGSPVAFGVLEQGYR 152
>gi|229366618|gb|ACQ58289.1| Proteasome subunit alpha type-3 [Anoplopoma fimbria]
Length = 255
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D +E ++ G++ LS R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLSEVARDEASSFRSSYGHDIPLKHLSDRVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGI 94
C+ ++ +D ++GPQL+ +D I+HGY G
Sbjct: 133 GCSFILGSYDKDDGPQLYMVDPSG-------ISHGYWGC 164
>gi|124485835|ref|YP_001030451.1| hypothetical protein Mlab_1015 [Methanocorpusculum labreanum Z]
gi|302595748|sp|A2SS78.1|PSB_METLZ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|124363376|gb|ABN07184.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
Length = 212
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSR--SPYNCN 58
M + G GD Q I LY++R G ++S AAA L+ YL SPY
Sbjct: 54 MTIAGGVGDAQQLVRIINVECNLYEIRRGQKISVGAAATI----LSNYLNQNRFSPYYVQ 109
Query: 59 MLIAGHDPEEGPQLFFIDYL-ASLIEIPYITHGYPGIVTLSIM 100
+L+ G D GP ++ +D + +E +++ G + ++
Sbjct: 110 LLVGGVDT-SGPSVYSVDAAGGATLEENFVSTGSGSLTAYGVL 151
>gi|227828116|ref|YP_002829896.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
M.14.25]
gi|227830823|ref|YP_002832603.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
gi|229579719|ref|YP_002838118.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|229581613|ref|YP_002840012.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|229585355|ref|YP_002843857.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238620316|ref|YP_002915142.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284998338|ref|YP_003420106.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|385773795|ref|YP_005646362.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
gi|385776430|ref|YP_005648998.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|302595724|sp|D2PDG6.1|PSB2_SULID RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595743|sp|C3MZI0.1|PSB2_SULIA RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595744|sp|C4KIR0.1|PSB2_SULIK RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595746|sp|C3NFX2.1|PSB1_SULIN RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595751|sp|C3MRE5.1|PSB2_SULIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595758|sp|C3MY41.1|PSB2_SULIM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595897|sp|C3N7K2.1|PSB2_SULIY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|227457271|gb|ACP35958.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|227459912|gb|ACP38598.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228010434|gb|ACP46196.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228012329|gb|ACP48090.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|228020405|gb|ACP55812.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238381386|gb|ACR42474.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284446234|gb|ADB87736.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|323475178|gb|ADX85784.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477910|gb|ADX83148.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 196
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
MA G GD + I+ Y++ G +S AAA L +Y P+ +L
Sbjct: 47 MAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLSVILYQY--KVMPFISEIL 104
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM-GEYH---RSEVQKRLIINV 116
G D E+GPQL+ +D + SLIE Y G + + ++ EY ++ +LI
Sbjct: 105 FGGVD-EKGPQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKA 163
Query: 117 --PNFKVTMVSKDGIKHLPPIKAKNIPEENKGIP 148
+ + + S DGI I K ENK IP
Sbjct: 164 IKASIERDITSGDGIDL--AIMDKKGNYENKFIP 195
>gi|193580210|ref|XP_001945150.1| PREDICTED: proteasome subunit alpha type-3-like [Acyrthosiphon
pisum]
Length = 253
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS------P 54
MAV G + D + + Y+ +S Y ++++EYLR + P
Sbjct: 76 MAVGGSTADASAILNVAREEARSYRQNYSMPISLE----YLNERVSEYLRIHTLYSYIRP 131
Query: 55 YNCNMLIAGHDPEEGPQLFFID 76
+ C ++I +DP++GPQ++ ID
Sbjct: 132 FGCTVIIGSYDPQDGPQMYMID 153
>gi|238583712|ref|XP_002390329.1| hypothetical protein MPER_10415 [Moniliophthora perniciosa FA553]
gi|215453616|gb|EEB91259.1| hypothetical protein MPER_10415 [Moniliophthora perniciosa FA553]
Length = 70
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 16/66 (24%)
Query: 83 EIPYITHGYPGIVTLSIMGEYHR----------------SEVQKRLIINVPNFKVTMVSK 126
E+PY HGY LS++ YH EV KRL+++ +KV +V K
Sbjct: 3 EVPYAAHGYGSFFALSLLDRYHDPNATLEEGLATLKRCIDEVTKRLVVSPGKYKVKVVDK 62
Query: 127 DGIKHL 132
DG + +
Sbjct: 63 DGTREV 68
>gi|73667743|ref|YP_303758.1| proteasome subunit beta [Methanosarcina barkeri str. Fusaro]
gi|121697221|sp|Q46G14.1|PSB_METBF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|72394905|gb|AAZ69178.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosarcina barkeri
str. Fusaro]
Length = 211
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M G GD Q + QLYKMR ++ + A ++ +L S P
Sbjct: 52 MTTAGSVGDAQQLVRLVNVESQLYKMRRNESMTIKGIATL----MSNFLNSNRYYPMMVQ 107
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGI-VTLSIMGEYHRSEV--------- 108
+LI G D + GP ++ +D L IE I+ G + ++ + +R ++
Sbjct: 108 LLIGGVD-KNGPGIYSLDALGGSIEETRISATGSGSPMAYGVLEDQYREDMTVKEGLDLA 166
Query: 109 -------QKRLIINVPNFKVTMVSKDGIKHLPPIKAKNI 140
KR + N V +++K+ + L P + K+I
Sbjct: 167 IRAIHNATKRDSASGENIDVVVITKEAFRRLDPEEVKSI 205
>gi|397572438|gb|EJK48257.1| hypothetical protein THAOC_32963 [Thalassiosira oceanica]
Length = 248
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
+ G + D + + ++Y++RN +S AA+ K LA +RS Y +M +
Sbjct: 83 MAGGAADCSFWERNLGIQCRMYELRNKKRISVAAAS----KLLANTMRSYRGYGLSMGTM 138
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
I G D E GPQL+++D + + Y + G ++ Y+R ++
Sbjct: 139 ITGWD-ETGPQLYYVDDDGTRLHGRYFSVGSGSTYAYGVLDTYYRPDL 185
>gi|428174475|gb|EKX43371.1| 20S proteasome subunit beta type 7 [Guillardia theta CCMP2712]
Length = 271
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 27/158 (17%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G S D E +A N+ L+++ G E A L++YL Y L+ G
Sbjct: 89 GTSADCENVTEMMASNLTLHRLNTGRECRVITAV----TMLSQYLFRYQGYISAALVVGG 144
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV-------- 116
GP L+ I S+ ++P++T G + +++ ++ ++++ I++
Sbjct: 145 VDSTGPSLYTIHPHGSVDQLPFVTMGSGSLAAMAVFEAGYQEGLERQPGIDLVRAAIQSG 204
Query: 117 --------PNFKVTMVSKDGIKHL-------PPIKAKN 139
N +T+++ +G++ P K+KN
Sbjct: 205 IDNDLGSGSNVDITVITPEGVQRFRNLDKAEPKYKSKN 242
>gi|56754849|gb|AAW25607.1| SJCHGC06118 protein [Schistosoma japonicum]
gi|226471392|emb|CAX70777.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
gi|226489366|emb|CAX75827.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
gi|226489368|emb|CAX75828.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
gi|226489370|emb|CAX75829.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
gi|226489372|emb|CAX75830.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
Length = 281
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 20/152 (13%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT I+ ++L+++ G +PR A + L YL Y L+ G
Sbjct: 85 GTAADTQMVTLMISSQVELHRLNTGR--TPRVIAPL--RLLKRYLYQYQGYVGAALVLGG 140
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV-------- 116
GP LF I S ++PYIT G + +S++ + +++ + +
Sbjct: 141 VDSTGPHLFSIAPHGSTDKLPYITMGSGSLACMSVLESRFKFNMEQDEAVKLVRDGIAAG 200
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKNI 140
N + +++KDG K++ N+
Sbjct: 201 IFNDMGSGSNVDICIITKDGTKYIRSYDEANV 232
>gi|402218035|gb|EJT98113.1| 20S proteasome subunit [Dacryopinax sp. DJM-731 SS1]
Length = 275
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 27/167 (16%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYL-RSRSPYNCNMLIAG 63
G + DT I+ N+ L+ + G + PR T L +YL R + +++ G
Sbjct: 83 GTAADTEYTTAMISSNMALHALSTGRQ--PRVVTAMT--MLKQYLFRYQGHVGAALVLGG 138
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV------- 116
DP GPQL+ I S ++PY+T G + +++ R+ + + + +
Sbjct: 139 VDPT-GPQLYTIHPHGSTDKLPYVTMGSGSLAAMAVFESSWRANMTREEAVQLVAAAISA 197
Query: 117 ---------PNFKVTMVSKDGIKHLPPIKAKNIPEENKGIPETEQYA 154
N V +V+KD + L +N N+ + + QY
Sbjct: 198 GIFNDLGSGSNVDVCIVTKDKTEML-----RNYEMPNQRVQKERQYG 239
>gi|296812899|ref|XP_002846787.1| proteasome component PUP1 [Arthroderma otae CBS 113480]
gi|238842043|gb|EEQ31705.1| proteasome component PUP1 [Arthroderma otae CBS 113480]
Length = 275
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYL-RSRSPYNCNML 60
A G + DT I+ NI+L+ + G +PR A T L ++L R + ++
Sbjct: 73 AGAGTAADTEFTTNLISSNIELHSLSTGR--APRVATCMT--MLKQHLFRYQGHIGAYLV 128
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVPN 118
+AG DP G LF + S ++PY+T G + +S+ + + K I + +
Sbjct: 129 VAGVDP-TGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFESMWKPSLTKEEAIKLTS 185
>gi|389860540|ref|YP_006362779.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525443|gb|AFK50641.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 206
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 1 MAVTGDSGDT---VQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNC 57
M ++G D V A +IA+ LY++ G ++ R+ + Y L+ YLR P+
Sbjct: 49 MTISGLVADAQVLVDEARYIAR---LYELDYGRRITLRSLSNYMSLILSAYLR-YVPFIV 104
Query: 58 NMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
+L+ G D EEGP L+++D S+ + Y + G V ++ + +R ++
Sbjct: 105 QLLLGGVD-EEGPSLYYLDLYGSISKEKYASTGSGSPVAYGVLEKEYRKDMS 155
>gi|443711335|gb|ELU05163.1| hypothetical protein CAPTEDRAFT_164084 [Capitella teleta]
Length = 273
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/151 (17%), Positives = 65/151 (43%), Gaps = 20/151 (13%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + ++ ++L+++ G ++ + K L +YL + L+ G
Sbjct: 85 GTAADTEMTTQMVSSQLELHRLNTG----RKSRCFTANKMLCQYLFRYQGHISAALVLGG 140
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV-------- 116
+GP L+ + S +PY+T G + +S+ + ++ ++ + + +
Sbjct: 141 VDVKGPHLYSVYPHGSTDGLPYVTMGSGSLAAMSVFEDGYKIDMSRDEAVQLVRDAIRAG 200
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKN 139
N V +++KD +++L P + N
Sbjct: 201 IFNDLGSGSNVDVCVITKDNVEYLRPYEVAN 231
>gi|294953043|ref|XP_002787566.1| proteasome subunit beta type 5-A precursor, putative [Perkinsus
marinus ATCC 50983]
gi|239902590|gb|EER19362.1| proteasome subunit beta type 5-A precursor, putative [Perkinsus
marinus ATCC 50983]
Length = 276
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPY--NCNML 60
+ G + D + + K +LY++RN ++ AA+ K LA + S Y +C +
Sbjct: 107 MAGGAADCQFWERHLGKLCKLYELRNNQRITTAAAS----KMLANIMYSYKGYGLSCGTM 162
Query: 61 IAGHDPEEGPQLFFID 76
IAG+D GP L+ +D
Sbjct: 163 IAGYDAVTGPALYMVD 178
>gi|326469518|gb|EGD93527.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
gi|326478955|gb|EGE02965.1| proteasome component PUP1 [Trichophyton equinum CBS 127.97]
Length = 275
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYL-RSRSPYNCNML 60
A G + DT I+ NI+L+ + G +PR A T L ++L R + ++
Sbjct: 73 AGAGTAADTEFTTNLISSNIELHSLSTGR--APRVATCMT--MLKQHLFRYQGHIGAYLV 128
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQK 110
+AG DP G LF + S ++PY+T G + +S+ + + K
Sbjct: 129 VAGVDP-TGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFESMWKPSLTK 177
>gi|315050414|ref|XP_003174581.1| proteasome component PUP1 [Arthroderma gypseum CBS 118893]
gi|311339896|gb|EFQ99098.1| proteasome component PUP1 [Arthroderma gypseum CBS 118893]
Length = 275
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYL-RSRSPYNCNML 60
A G + DT I+ NI+L+ + G +PR A T L ++L R + ++
Sbjct: 73 AGAGTAADTEFTTNLISSNIELHSLSTGR--APRVATCMT--MLKQHLFRYQGHIGAYLV 128
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSI 99
+AG DP G LF + S ++PY+T G + +S+
Sbjct: 129 VAGVDP-TGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSV 166
>gi|327303268|ref|XP_003236326.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326461668|gb|EGD87121.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 275
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYL-RSRSPYNCNML 60
A G + DT I+ NI+L+ + G +PR A T L ++L R + ++
Sbjct: 73 AGAGTAADTEFTTNLISSNIELHSLSTGR--APRVATCMT--MLKQHLFRYQGHIGAYLV 128
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVPN 118
+AG DP G LF + S ++PY+T G + +S+ + + K I + +
Sbjct: 129 VAGVDP-TGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFESMWKPSLTKDEAIKLAS 185
>gi|302509436|ref|XP_003016678.1| hypothetical protein ARB_04970 [Arthroderma benhamiae CBS 112371]
gi|302655770|ref|XP_003019669.1| hypothetical protein TRV_06298 [Trichophyton verrucosum HKI 0517]
gi|291180248|gb|EFE36033.1| hypothetical protein ARB_04970 [Arthroderma benhamiae CBS 112371]
gi|291183406|gb|EFE39024.1| hypothetical protein TRV_06298 [Trichophyton verrucosum HKI 0517]
Length = 275
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYL-RSRSPYNCNML 60
A G + DT I+ NI+L+ + G +PR A T L ++L R + ++
Sbjct: 73 AGAGTAADTEFTTNLISSNIELHSLSTGR--APRVATCMT--MLKQHLFRYQGHIGAYLV 128
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVPN 118
+AG DP G LF + S ++PY+T G + +S+ + + K I + +
Sbjct: 129 VAGVDP-TGTHLFTVHAHGSTDKLPYVTMGSGSLAAMSVFESMWKPSLTKDEAIKLAS 185
>gi|14520958|ref|NP_126433.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|17380268|sp|Q9V0N9.1|PSB2_PYRAB RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|5458175|emb|CAB49664.1| psmB-like proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380741512|tpe|CCE70146.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 207
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 14/137 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQL--AEYLRSRSPYNCN 58
+A GD GD + + +LY ++G +S +A A L A L PY
Sbjct: 53 IAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARML----PYLAW 108
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV-- 116
L+ G D E P+L+ +D + + E Y+ G S++ +R +++ R I +
Sbjct: 109 FLVGGFD--EKPRLYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAV 166
Query: 117 ----PNFKVTMVSKDGI 129
K + S DGI
Sbjct: 167 EAINSAIKRDVFSGDGI 183
>gi|443717761|gb|ELU08679.1| hypothetical protein CAPTEDRAFT_228785 [Capitella teleta]
Length = 272
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/151 (17%), Positives = 65/151 (43%), Gaps = 20/151 (13%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + ++ ++L+++ G ++ + K L +YL + L+ G
Sbjct: 84 GTAADTEMTTQMVSSQLELHRLNTG----RKSRCFTANKMLCQYLFRYQGHISAALVLGG 139
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV-------- 116
+GP L+ + S +PY+T G + +S+ + ++ ++ + + +
Sbjct: 140 VDVKGPHLYSVYPHGSTDGLPYVTMGSGSLAAMSVFEDGYKIDMSRDEAVQLVRDAIRAG 199
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKN 139
N V +++KD +++L P + N
Sbjct: 200 IFNDLGSGSNVDVCVITKDNVEYLRPYEVAN 230
>gi|196000078|ref|XP_002109907.1| hypothetical protein TRIADDRAFT_21588 [Trichoplax adhaerens]
gi|190588031|gb|EDV28073.1| hypothetical protein TRIADDRAFT_21588 [Trichoplax adhaerens]
Length = 229
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 20/158 (12%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT I+ I+L+ + E PR A T L + L Y L+ G
Sbjct: 63 GTAADTEYVTRLISSKIELHSLTT--ERKPRVVAALT--MLKQMLFRYQGYVGAYLVLGG 118
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGE-YHRS---EVQKRLIINV---- 116
GP L+ + S ++PY+T G + +++ + YH + + K+L+ +
Sbjct: 119 VDSTGPHLYTVHARGSSDKLPYVTMGSGSLAAMAVFEDRYHVNMELDEAKQLVRDAIAAG 178
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKNIPEENKG 146
N + +++KDG ++ P NI +G
Sbjct: 179 IFNDLGSGSNVDLCVITKDGTDYIRPFDEANIKGVRQG 216
>gi|320101454|ref|YP_004177046.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753806|gb|ADV65564.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 209
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
+ GD G V+ AKN Y++++G E+ R+ A L Y +P +++
Sbjct: 54 GLMGDVGFLVKVLRLEAKN---YELQHGREIRARSMAKLLSLILYNY--KLAPMLTEVVV 108
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHG 90
G D +EGP L+ +D + SLIE Y+ G
Sbjct: 109 GGFD-DEGPSLYILDPVGSLIEEKYVAVG 136
>gi|156096076|ref|XP_001614072.1| 20S proteasome beta subunit [Plasmodium vivax Sal-1]
gi|148802946|gb|EDL44345.1| 20S proteasome beta subunit, putative [Plasmodium vivax]
Length = 270
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 64/156 (41%), Gaps = 20/156 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
A G +GD ++ N++L+++ + PR A +R L + L Y +
Sbjct: 84 CAGAGVAGDLEHTTLWLQHNVELHRLNTNTQ--PRVAMCVSR--LTQELFKYQGYKVCAI 139
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS----EVQKRLIINV 116
+ G GPQL+ I S +P+ G + ++++ +R E K L+
Sbjct: 140 VLGGVDVTGPQLYGIHPHGSSCLLPFTALGSGSLSAMAVLEAKYRDNMTIEEGKELVCEA 199
Query: 117 ------------PNFKVTMVSKDGIKHLPPIKAKNI 140
N + +++KDG +H+ P K N+
Sbjct: 200 ICAGIFNDLGSGGNVDICVITKDGSQHIRPYKQPNV 235
>gi|221058827|ref|XP_002260059.1| proteasome subunit beta type 7 precursor [Plasmodium knowlesi
strain H]
gi|193810132|emb|CAQ41326.1| proteasome subunit beta type 7 precursor,putative [Plasmodium
knowlesi strain H]
Length = 270
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 64/156 (41%), Gaps = 20/156 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
A G +GD ++ N++L+++ + PR A +R L + L Y +
Sbjct: 84 CAGAGVAGDLEHTTLWLQHNVELHRLNTNTQ--PRVAMCVSR--LTQELFKYQGYKVCAI 139
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS----EVQKRLIINV 116
+ G GPQL+ I S +P+ G + ++++ +R E K L+
Sbjct: 140 VLGGVDVTGPQLYGIHPHGSSCLLPFTALGSGSLSAMAVLEAKYRDNMTIEEGKELVCEA 199
Query: 117 ------------PNFKVTMVSKDGIKHLPPIKAKNI 140
N + +++KDG +H+ P K N+
Sbjct: 200 ICAGIFNDLGSGGNVDICVITKDGSQHIRPYKQPNV 235
>gi|337284212|ref|YP_004623686.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334900146|gb|AEH24414.1| proteasome beta subunit precursor [Pyrococcus yayanosii CH1]
Length = 204
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+A G+ GD + + ++LY+ R G +S +A A LA L PY
Sbjct: 50 IAGAGNVGDILSLVRLLRAEVRLYRSRVGRSMSAKALA----TLLANILNGTRYFPYLVW 105
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
L+ G+D + P+L+ +D + E Y+ G SI+ ++ E+
Sbjct: 106 FLVGGYD--DAPRLYSVDMAGGITEDKYVAAGSGMEFAFSILDSQYKPEMS 154
>gi|397780986|ref|YP_006545459.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
gi|396939488|emb|CCJ36743.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
Length = 214
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M G GD Q I LY+MR G +S AA+ L+ YL PY
Sbjct: 54 MTTAGGVGDAQQLVRIIQVECSLYEMRRGRTMSVGAASTL----LSNYLNQNRYYPYYVQ 109
Query: 59 MLIAGHDPEEGPQLFFIDYLA 79
+L+ G D E GP ++ +D +
Sbjct: 110 LLMGGFD-EGGPSVYSVDAMG 129
>gi|384245501|gb|EIE18995.1| 20S proteasome beta subunit E, type beta 5 [Coccomyxa
subellipsoidea C-169]
Length = 276
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
+ G + D + + + +LY++ NG +S RAA+ K LA + S Y +M +
Sbjct: 104 MAGGAADCQFWQRNLGQQCRLYELNNGKRISVRAAS----KLLANVMFSYKGYGLSMGTM 159
Query: 61 IAGHDPEEGPQLFFID 76
+AG+DP GP L+++D
Sbjct: 160 VAGYDP-TGPGLYYVD 174
>gi|288561233|ref|YP_003424719.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
gi|302595755|sp|D3E0A3.1|PSB_METRM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288543943|gb|ADC47827.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
Length = 207
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 22/157 (14%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G D + I+ LY++RNG ++S AAA + L SP LI
Sbjct: 54 IAGSVADAQTLMKVISAETSLYRLRNGKDISLEAAAAVSSNIL-----HSSPAYVQTLIG 108
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEY--------HRSEVQKRLI- 113
G D + G ++ +D +I+ +I+ G ++ + +EV R I
Sbjct: 109 GVD-DTGASIYSLDAAGGMIKDTFISTGSGSTFAYGVLEDRFYEDITVEEATEVAIRAIK 167
Query: 114 -------INVPNFKVTMVSKDGIKHLPPIKAKNIPEE 143
+ F V V+KDG K L + I E+
Sbjct: 168 AATERDTFSGNGFLVANVTKDGFKMLEKEEVDAIIEK 204
>gi|449678129|ref|XP_002153989.2| PREDICTED: proteasome subunit beta type-7-like [Hydra
magnipapillata]
Length = 215
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ NI+L+++ + PR A + L +YL + L+ G
Sbjct: 28 GTAADTEYTTQIISANIELHRLET--QKKPRVAT--ACRMLKQYLHRYQGHVSAALVLGG 83
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGE----YHRSEVQKRLIINV---- 116
GP L+ I S ++PY+T G + +++ Y + K L+
Sbjct: 84 VDVTGPCLYTIAPHGSTDKLPYVTMGSGSLAAMAVFEAGFKPYMELDDAKELVRQAILGG 143
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKNIPEENKGI 147
N + +++KDG+ ++ P N NKG+
Sbjct: 144 IFNDLGSGSNVDLCVITKDGVDYIRPYDRAN----NKGV 178
>gi|219567038|dbj|BAH05037.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 232
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LYK+RN + +S AA+ K L+ + +M +
Sbjct: 73 MSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS----KLLSNMMLGYKGMGLSMGSM 128
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP LF++D
Sbjct: 129 ICGWD-KEGPGLFYVD 143
>gi|348537517|ref|XP_003456240.1| PREDICTED: proteasome subunit alpha type-3-like [Oreochromis
niloticus]
Length = 255
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D AE + ++ G++ LS R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLAEVAREEASNFRSNYGHDIPLKHLSDRVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ +D ++GPQL+ +D
Sbjct: 133 GCSFILGSYDKDDGPQLYMVD 153
>gi|432937607|ref|XP_004082461.1| PREDICTED: proteasome subunit alpha type-3-like [Oryzias latipes]
Length = 226
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D AE + ++ G++ LS R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLAEVAREEASNFRSNYGHDIPLKHLSDRVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ +D ++GPQL+ +D
Sbjct: 133 GCSFILGSYDKDDGPQLYMVD 153
>gi|70934295|ref|XP_738395.1| proteasome subunit beta type 7 precursor [Plasmodium chabaudi
chabaudi]
gi|56514579|emb|CAH86228.1| proteasome subunit beta type 7 precursor, putative [Plasmodium
chabaudi chabaudi]
Length = 221
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 20/155 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
A G +GD ++ N++L+++ + PR A +R L + L Y +
Sbjct: 35 CAGAGVAGDLEHTTLWLQHNVELHRLNT--KTQPRVAMCVSR--LTQELFKYQGYKVCAI 90
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS----EVQKRLIINV 116
+ G GPQL+ I S +P+ G + ++++ +R E K L+
Sbjct: 91 VLGGVDVTGPQLYGIHPHGSSCLLPFTALGSGSLNAMTVLEAKYRDNMTIEEGKELVCEA 150
Query: 117 ------------PNFKVTMVSKDGIKHLPPIKAKN 139
N + +++KDG +H+ P K N
Sbjct: 151 ICAGIFNDLGSGGNVDICVITKDGTQHIRPYKQPN 185
>gi|297527496|ref|YP_003669520.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
gi|297256412|gb|ADI32621.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
Length = 215
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 14 AEFIAKNIQL----YKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEG 69
A+FI + ++L YK++ E+ R A L Y +P +++ G+D ++G
Sbjct: 71 AQFIIRALRLEAENYKLQLEREIRVRGLAKILSLLLYSY--KLAPLMTEIVVGGYD-DKG 127
Query: 70 PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
PQ++ +D + SLIE Y+ G G + L I+ + +R ++
Sbjct: 128 PQIYVLDPVGSLIEDKYVALGSGGPIALGIIEKEYREDID 167
>gi|82594228|ref|XP_725335.1| proteasome subunit, beta type, 7 [Plasmodium yoelii yoelii 17XNL]
gi|23480306|gb|EAA16900.1| proteasome subunit, beta type, 7 [Plasmodium yoelii yoelii]
Length = 270
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 20/155 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
A G +GD ++ N++L+++ + PR A +R L + L Y +
Sbjct: 84 CAGAGVAGDLEHTTLWLQHNVELHRLNT--KTQPRVAMCVSR--LTQELFKYQGYKVCAI 139
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS----EVQKRLIINV 116
+ G GPQL+ I S +P+ G + ++++ +R E K L+
Sbjct: 140 VLGGVDVTGPQLYGIHPHGSSCLLPFTALGSGSLNAMTVLEAKYRDNMTIEEGKELVCEA 199
Query: 117 ------------PNFKVTMVSKDGIKHLPPIKAKN 139
N + +++KDG +H+ P K N
Sbjct: 200 ICAGIFNDLGSGGNVDICVITKDGTQHIRPYKQPN 234
>gi|68075915|ref|XP_679877.1| proteasome subunit beta type 7 precursor [Plasmodium berghei strain
ANKA]
gi|56500717|emb|CAH98881.1| proteasome subunit beta type 7 precursor, putative [Plasmodium
berghei]
Length = 270
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 20/155 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
A G +GD ++ N++L+++ + PR A +R L + L Y +
Sbjct: 84 CAGAGVAGDLEHTTLWLQHNVELHRLNT--KTQPRVAMCVSR--LTQELFKYQGYKVCAI 139
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS----EVQKRLIINV 116
+ G GPQL+ I S +P+ G + ++++ +R E K L+
Sbjct: 140 VLGGVDVTGPQLYGIHPHGSSCLLPFTALGSGSLNAMTVLEAKYRDNMTIEEGKELVCEA 199
Query: 117 ------------PNFKVTMVSKDGIKHLPPIKAKN 139
N + +++KDG +H+ P K N
Sbjct: 200 ICAGIFNDLGSGGNVDICVITKDGTQHIRPYKQPN 234
>gi|315518885|dbj|BAJ51775.1| proteasome subunit, beta type 8 [Oryzias dancena]
gi|315518889|dbj|BAJ51777.1| proteasome subunit, beta type 8 [Oryzias dancena]
Length = 238
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LYK+RN + +S AA+ K L+ + +M +
Sbjct: 79 MSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 134
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP LF++D
Sbjct: 135 ICGWD-KEGPGLFYVD 149
>gi|331226376|ref|XP_003325858.1| 20S proteasome subunit beta 2 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309304848|gb|EFP81439.1| 20S proteasome subunit beta 2 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 293
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYT--RKQLAEYLRSRSPYNCNMLIA 62
G + DT I+ NIQL+ + G + PR T ++ L +Y + ++I
Sbjct: 89 GTAADTEFVTAMISSNIQLHALSTGRQ--PRVVTAMTMLKQHLYKY---QGHVGAALVIG 143
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSI 99
G DP GP LF + S ++PY+T G + +++
Sbjct: 144 GVDPT-GPHLFTVAPHGSTDKLPYVTMGSGSLAAMAV 179
>gi|218884589|ref|YP_002428971.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390939081|ref|YP_006402819.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
fermentans DSM 16532]
gi|302595704|sp|B8D673.1|PSB1_DESK1 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|218766205|gb|ACL11604.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390192188|gb|AFL67244.1| proteasome endopeptidase complex, beta subunit [Desulfurococcus
fermentans DSM 16532]
Length = 202
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
+ GD V+ AKN Y++++G E+ R+ A L Y +P +++
Sbjct: 54 GLMGDVNFLVKVLRLEAKN---YELQHGREIKTRSLAKLLSVILYSY--KLAPMLTEVVV 108
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHG 90
G+D EEGP L+ +D + S+IE Y+ G
Sbjct: 109 GGYD-EEGPSLYILDPVGSVIEEKYVAVG 136
>gi|118431089|ref|NP_147297.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121732295|sp|Q9YER0.2|PSB2_AERPE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|116062415|dbj|BAA79486.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 219
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M V+G D ++ + + I+LY+M N + S R + L+ L S PY
Sbjct: 68 MTVSGLVADAQILSDVLREEIRLYEMTNKVKPSVR----FVASLLSNILFSSKFFPYIVQ 123
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVPN 118
+++ G+D + P+L+ +D S+ E Y G + ++ E +R ++ I V
Sbjct: 124 LIVGGYDTQ--PRLYTLDLFGSITEDKYTATGSGSPIAYGVLEERYREDLSVEEAIKVAT 181
>gi|299470598|emb|CBN80220.1| proteasome subunit beta type 6 [Ectocarpus siliculosus]
Length = 241
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A +G S DT A I ++ Y+ G + RAAA TR ++ + ++
Sbjct: 65 LARSGSSADTQFVAGVIEAKLEAYRTEFGRYPTVRAAATATRNLC---YANKDQLSAGII 121
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTL 97
AG D EG +F + SL+E P+ G + L
Sbjct: 122 CAGWDSREGGSVFSVPQGGSLLEQPFAVSGSGAVYAL 158
>gi|320165793|gb|EFW42692.1| proteasome subunit beta 7 [Capsaspora owczarzaki ATCC 30864]
Length = 273
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 69/157 (43%), Gaps = 22/157 (14%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT Q + IA ++L+++ G + A ++ L +Y + +++ G
Sbjct: 86 GTAADTEQSTKMIASQLELHRLTTGRKSRVVTACRLLKQMLFKY---QGNIGAALVLGGV 142
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV-------- 116
D GP L+ I S ++PY+T G + +++ +R ++++ + +
Sbjct: 143 DIN-GPTLYSIHPHGSTDKLPYVTMGSGSLAAMAVFEAGYRPDMEEADAVKLVRDAIAAG 201
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKNI--PEE 143
N V +++KD + + P + N+ P+E
Sbjct: 202 IFNDLGSGSNVDVCILTKDSTQMIRPFEIANVKPPQE 238
>gi|429217521|ref|YP_007175511.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429134050|gb|AFZ71062.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 210
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M + G D A+ I + +LY+ N +L+ + A LA L S PY
Sbjct: 58 MTIAGLVADAQMLADAIREEARLYETMNKRKLTVKGMATL----LANVLFSTKYYPYLVQ 113
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVP 117
+++ G+D E P+L+ +DY S+ E + G V L ++ + +R ++ +N+
Sbjct: 114 LIVGGYDTE--PRLYNLDYFGSITEEKMTSTGSGSPVALGVLEKDYRPDLSLEEAMNLA 170
>gi|154150927|ref|YP_001404545.1| proteasome endopeptidase complex protein [Methanoregula boonei 6A8]
gi|302595832|sp|A7I841.1|PSB_METB6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|153999479|gb|ABS55902.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
Length = 213
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M + G GD Q A I LY++R E++ AA+ L+ YL PY
Sbjct: 54 MTIAGGVGDAQQLARIITVECNLYQIRRSREITVGAASTL----LSNYLNQNRYFPYYVQ 109
Query: 59 MLIAGHDPEEGPQLFFIDYLAS 80
+L+ G D + GP ++ +D +
Sbjct: 110 LLVGGID-DHGPSVYSVDAMGG 130
>gi|429961416|gb|ELA40961.1| hypothetical protein VICG_01991 [Vittaforma corneae ATCC 50505]
Length = 196
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ +TG+ GD+ + + + +L M+ ++ P A ++ E LRSR P +
Sbjct: 44 VCITGEQGDSFRTVSLLEQYSKLLSMKYKEKIGPELLARLLSSEIYESLRSR-PLEVQGI 102
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGY 91
+ G + +LF ID ++ E ++ GY
Sbjct: 103 VGGRSEDNTLKLFGIDKYGAVHEDNFVVTGY 133
>gi|21226796|ref|NP_632718.1| proteasome subunit beta [Methanosarcina mazei Go1]
gi|452209277|ref|YP_007489391.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
gi|74550648|sp|Q8PZ04.1|PSB_METMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|20905092|gb|AAM30390.1| Proteasome, beta subunit [Methanosarcina mazei Go1]
gi|452099179|gb|AGF96119.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
Length = 210
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M G GD Q ++ QLYKMR ++ + A ++ +L + P
Sbjct: 52 MTTAGSVGDAQQLVRLVSVESQLYKMRRNESMTIKGIATL----MSNFLNANRYYPMMVQ 107
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGI-VTLSIMGEYHRSEV--------- 108
+LI G D + GP ++ +D + IE I+ G + ++ + +R ++
Sbjct: 108 LLIGGVD-KNGPAIYSLDPMGGSIEETRISATGSGSPMAYGVLEDQYREDIAVKEGLDLA 166
Query: 109 -------QKRLIINVPNFKVTMVSKDGIKHLPPIKAKN 139
KR + N V +++K+ K L P + K+
Sbjct: 167 IRAIHNATKRDSASGENIDVVVITKEAFKRLDPEEVKS 204
>gi|118431082|ref|NP_147287.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121727671|sp|Q9YES4.2|PSB1_AERPE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|116062408|dbj|BAA79472.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 203
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A G GD + ++L + G + R A + L Y P+N +
Sbjct: 48 IAFAGLYGDMGGLVRIVEGQMRLASLETGKPATVRNVAKFLSSLLYSY--KFFPFNVEAI 105
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM 100
+ G DP P+L+ +D L S+IE Y+ G ++
Sbjct: 106 VGGIDPGGEPKLYVLDPLGSIIEEDYVAAGTGATTAFGLL 145
>gi|389585049|dbj|GAB67780.1| 20S proteasome beta subunit [Plasmodium cynomolgi strain B]
Length = 239
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 20/155 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
A G +GD ++ N++L+++ + PR A +R L + L Y +
Sbjct: 84 CAGAGVAGDLEHTTLWLQHNVELHRLNTNTQ--PRVAMCVSR--LTQELFKYQGYKVCAI 139
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS----EVQKRLIINV 116
+ G GPQL+ I S +P+ G + ++++ +R E K L+
Sbjct: 140 VLGGVDVTGPQLYGIHPHGSSCLLPFTALGSGSLSAMAVLEAKYRDNMTIEEGKELVCEA 199
Query: 117 ------------PNFKVTMVSKDGIKHLPPIKAKN 139
N + +++KDG +H+ P K N
Sbjct: 200 ICAGIFNDLGSGGNVDICVITKDGSQHIRPYKQPN 234
>gi|332159619|ref|YP_004424898.1| proteasome beta subunit [Pyrococcus sp. NA2]
gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
Length = 204
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 20/159 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+A GD GD + + +LY + G E+S RA A L Y PY L
Sbjct: 50 IAGAGDVGDILNLVRLLRAEAKLYYAQFGREMSARALATLLANILNGY--KYFPYMAWFL 107
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----------- 109
+ G+D E +L+ +D + + E Y+ G SI+ + ++
Sbjct: 108 VGGYD--EKARLYSVDAVGGITEDKYMAAGSGMEFAYSILDAEYSDDITVKEGVKLAVKA 165
Query: 110 -----KRLIINVPNFKVTMVSKDGIKHLPPIKAKNIPEE 143
KR + + V ++K+G + K K I ++
Sbjct: 166 INTAIKRDVFSGDGILVVTITKEGYSEISNAKLKAILKQ 204
>gi|170573959|ref|XP_001892613.1| proteasome subunit alpha type 6 [Brugia malayi]
gi|158601718|gb|EDP38551.1| proteasome subunit alpha type 6, putative [Brugia malayi]
Length = 246
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 18/75 (24%)
Query: 14 AEFIAKNIQL----YKMRNGY-----ELSPRAA---AYYTRKQLAEYLRSRSPYNCNMLI 61
++F K Q+ +K +NGY +LS R A YYT Q AE LRS C ML+
Sbjct: 87 SKFQVKRAQIEAAEWKYKNGYNMSVEQLSKRMADLNQYYT--QNAE-LRS---LGCVMLL 140
Query: 62 AGHDPEEGPQLFFID 76
+D EEGPQ+F +D
Sbjct: 141 ISYDDEEGPQIFRVD 155
>gi|330834117|ref|YP_004408845.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
gi|329566256|gb|AEB94361.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
Length = 217
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-LSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
M G D +QF KNI Y + +G ++ ++ A Y L++ PY +
Sbjct: 66 MTTAGSVAD-LQFIYNYMKNIYHYNVISGNRPVTVKSLATYLTNVLSQ--SKYFPYLVQI 122
Query: 60 LIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
LI G+D + P+LF +DYL + E Y+ G V + ++ + +R ++
Sbjct: 123 LIGGYDTQ--PRLFNLDYLGDMTEETYVATGSGSPVAMGVLEDGYRPDLS 170
>gi|212223310|ref|YP_002306546.1| proteasome subunit beta [Thermococcus onnurineus NA1]
gi|302595732|sp|B6YSW2.1|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
Length = 203
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQL--AEYLRSRSPYNCN 58
+A G GD + + ++LY+ + G E+S +A A T L + ++ PY
Sbjct: 50 LAGAGSVGDILSLVRLLRAEVKLYRAKVGREISVKALATLTSNILHGSRFM----PYFGW 105
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
LIAG+D E P L+ +D + E + G + +++ + ++ ++
Sbjct: 106 FLIAGYD--EKPALYSLDMAGGVTEDKFTAAGSGMELAFAVLEDGYKDDIN 154
>gi|307353377|ref|YP_003894428.1| proteasome endopeptidase complex subunit beta [Methanoplanus
petrolearius DSM 11571]
gi|307156610|gb|ADN35990.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
petrolearius DSM 11571]
Length = 209
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M G GD Q A ++ LY +R G E+S A+A L+ L + PY
Sbjct: 57 MTTAGGVGDAQQLARWVQVECSLYNIRRGREMSVGASASL----LSNILNNNRMMPYYVQ 112
Query: 59 MLIAGHDPEEGPQLFFIDYLA 79
+L+ G D GP ++ +D L
Sbjct: 113 LLVGGVDS-GGPSIYSVDALG 132
>gi|20092669|ref|NP_618744.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
gi|74551014|sp|Q8TJB5.1|PSB_METAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19917953|gb|AAM07224.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
Length = 210
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M G GD Q ++ QLYKMR ++ + A ++ +L + P
Sbjct: 52 MTTAGSVGDAQQLVRLVSVESQLYKMRRNESMTIKGIATL----MSNFLNANRYYPMMVQ 107
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGI-VTLSIMGEYHRSEV--------- 108
+LI G D + GP ++ +D + IE I+ G + ++ + ++ ++
Sbjct: 108 LLIGGVD-KNGPAIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYKEDIAVKEGLDLA 166
Query: 109 -------QKRLIINVPNFKVTMVSKDGIKHLPPIKAKN 139
KR + N V +++K+ K L P + K+
Sbjct: 167 IRAIHNAMKRDSASGENIDVVVITKEAFKRLDPEEVKS 204
>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595707|sp|A1RSJ8.1|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
Length = 203
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+A G D A + N+ Y++ + + RA A K L+ + SR P+
Sbjct: 51 IASAGIIADMQTLARILKLNVMSYELEVRKKPTVRAMA----KLLSIIMFSRRLLPFYAE 106
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
+L+ G D EEGP L +D L SLIE Y G + +S++ +R ++
Sbjct: 107 VLVGGVD-EEGPHLIVMDPLGSLIEDNYAALGTGAKLAVSLLDATYRPDIS 156
>gi|149236626|ref|XP_001524190.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451725|gb|EDK45981.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 2556
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 9 DTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEE 68
DTVQF + ++ +L++ NG +L P + K L LRS + +N +++ G P
Sbjct: 2092 DTVQFGDTLSVRDELFQYDNGKDLLPLQCNF---KVLETALRSVA-HNIPLILTG--PTS 2145
Query: 69 GPQLFFIDYLASLIEIPYITHGYPGIV-TLSIMGEYHRSEVQKRL------IINVPNFKV 121
+ + YLA+L+ V + I+G Y +S++ ++ + N+ N ++
Sbjct: 2146 SGKTSLVRYLANLLGAKLEEFSMNSEVDAMDILGGYEQSDIVRQFHSFLAELSNILNEQI 2205
Query: 122 TMVSKDGIKHLP 133
+DG H P
Sbjct: 2206 ITSIRDGATHAP 2217
>gi|409075287|gb|EKM75669.1| hypothetical protein AGABI1DRAFT_116265 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 268
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT I+ N++L+ +++G + PR T + + R + +++ G
Sbjct: 81 GTAADTEFTTALISSNMELHALQSGRK--PRVVTAMTMLKQTLF-RYQGHIGAALVLGGV 137
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM-----GEYHRSEVQKRLIINV--- 116
DP GPQLF I S ++PY+T G + +++ R E +I+ +
Sbjct: 138 DPT-GPQLFTIHPHGSTDKLPYVTMGSGSLAAMAVFESKWSANMERQEALDLVILAISAG 196
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKNIPEENKGIPETEQY 153
N +++ DG + L +N+ N+ + + Y
Sbjct: 197 IFNDLGSGSNVDACIITADGTEML-----RNVDMPNQRVQKERDY 236
>gi|426194681|gb|EKV44612.1| hypothetical protein AGABI2DRAFT_194579 [Agaricus bisporus var.
bisporus H97]
Length = 268
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT I+ N++L+ +++G + PR T + + R + +++ G
Sbjct: 81 GTAADTEFTTALISSNMELHALQSGRK--PRVVTAMTMLKQTLF-RYQGHIGAALVLGGV 137
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM-----GEYHRSEVQKRLIINV--- 116
DP GPQLF I S ++PY+T G + +++ R E +I+ +
Sbjct: 138 DPT-GPQLFTIHPHGSTDKLPYVTMGSGSLAAMAVFESKWSANMERQEALDLVILAISAG 196
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKNIPEENKGIPETEQY 153
N +++ DG + L +N+ N+ + + Y
Sbjct: 197 IFNDLGSGSNVDACIITADGTEML-----RNVDMPNQRVQKERDY 236
>gi|393214846|gb|EJD00338.1| proteasome subunit [Fomitiporia mediterranea MF3/22]
Length = 276
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT I+ N++L+ + G +PR T L +YL Y L+ G
Sbjct: 84 GTAADTEFTTAMISSNMELHALSTGR--TPRVVTAMT--MLKQYLFRYQGYVSAALVLGG 139
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSI 99
GP LF + S ++PY+T G + +S+
Sbjct: 140 VDSTGPHLFTVAPHGSTDKLPYVTMGSGSLAAMSV 174
>gi|325967588|ref|YP_004243780.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323706791|gb|ADY00278.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 205
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 61/140 (43%), Gaps = 13/140 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
MA G D + + LY + S R+AA K L+ L S PY
Sbjct: 52 MASIGILADMQVLTKIAKAYMSLYSLDTKTRPSIRSAA----KLLSYVLFSNRILPYFVE 107
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----KRLII 114
+L+ G D +EGP LF +D L SLIE Y G + ++I+ ++ + + L I
Sbjct: 108 VLVGGID-DEGPHLFIMDALGSLIEDDYAAVGTGTKLAIAILESNYKPGMSIKEARDLAI 166
Query: 115 NVPNFKVTM--VSKDGIKHL 132
N ++ VS DGI L
Sbjct: 167 KAINQSISRDPVSGDGIDIL 186
>gi|260161887|dbj|BAI43477.1| proteasome subunit PSMB7 [Eptatretus stoutii]
Length = 277
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G + A ++ L Y + ++++ G
Sbjct: 90 GTAADTEITTQMISSNLELHSLSTGRKARVATACCMLKQMLFRY---QGHIGASLVLGGV 146
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----SEVQKRLIINV---- 116
D GP L+ I S ++P++T G + +++ + ++ E K L+ +
Sbjct: 147 DIS-GPSLYSIHPHGSTDKLPFVTLGSGSLAAMAVFEDRYKLNMEEEEAKTLVRDAIASG 205
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKNIPEENKG 146
N + ++++D I +L P + N + KG
Sbjct: 206 IFNDLGSGSNIDICVITRDKIDYLRPYEEANKKGDRKG 243
>gi|405119191|gb|AFR93964.1| proteasome subunit [Cryptococcus neoformans var. grubii H99]
Length = 283
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 22/145 (15%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYL-RSRSPYNCNMLIAG 63
G + DT I+ N++L+ + G + A L +YL R + ++++ G
Sbjct: 71 GTAADTEFVTNLISSNLELHALSQGRQ----ARIVTAMTMLKQYLFRYQGHVGAHLVLGG 126
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV------- 116
D GPQLF + S ++PY+T G + +++ + + ++ I++
Sbjct: 127 VDAT-GPQLFTVHAHGSTDKLPYVTMGSGSLAAMAVFESSFKEHMTRQEAIDLVARAIRS 185
Query: 117 ---------PNFKVTMVSKDGIKHL 132
N V +++K+G + L
Sbjct: 186 GVFNDLGSGSNVDVAVITKNGTEML 210
>gi|312071414|ref|XP_003138597.1| proteasome subunit alpha type 6 [Loa loa]
gi|307766234|gb|EFO25468.1| proteasome subunit alpha type 6 [Loa loa]
Length = 289
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 18/75 (24%)
Query: 14 AEFIAKNIQL----YKMRNGY-----ELSPRAA---AYYTRKQLAEYLRSRSPYNCNMLI 61
++F K Q+ +K +NGY +LS R A YYT Q AE LRS C ML+
Sbjct: 130 SKFQVKRAQIEAAEWKYKNGYNMSVEQLSRRMADLNQYYT--QNAE-LRS---LGCVMLL 183
Query: 62 AGHDPEEGPQLFFID 76
+D EEGPQ+F +D
Sbjct: 184 ISYDDEEGPQIFRVD 198
>gi|315518891|dbj|BAJ51778.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 238
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LYK+RN + +S AA+ K L + +M +
Sbjct: 79 MSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS----KLLCNMMLGYRGMGLSMGSM 134
Query: 61 IAGHDPEEGPQLFFIDY 77
I G D +EGP L+++D+
Sbjct: 135 ICGWD-KEGPGLYYVDH 150
>gi|332796202|ref|YP_004457702.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
gi|332693937|gb|AEE93404.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
Length = 209
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 11 VQFAEFIAKNIQLYKMRNGYE-LSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEG 69
+QF ++ KN+ Y +G + +A A Y L++ PY +LI G+D +
Sbjct: 63 LQFLYYVLKNLYHYNYISGNRPTTVKALATYLANTLSQ--NKYFPYLVQILIGGYDTQ-- 118
Query: 70 PQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
P+L+ +DY + E Y+ G V + ++ + +R ++
Sbjct: 119 PRLYNLDYFGDMTEEKYVATGSGSPVAMGVLEDEYREDL 157
>gi|402594161|gb|EJW88087.1| proteasome subunit alpha type, partial [Wuchereria bancrofti]
Length = 223
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 18/75 (24%)
Query: 14 AEFIAKNIQL----YKMRNGY-----ELSPRAA---AYYTRKQLAEYLRSRSPYNCNMLI 61
++F K Q+ +K +NGY +LS R A YYT Q AE LRS C ML+
Sbjct: 87 SKFQVKRAQIEAAEWKYKNGYNMSVEQLSRRMADLNQYYT--QNAE-LRS---LGCVMLL 140
Query: 62 AGHDPEEGPQLFFID 76
+D EEGPQ+F +D
Sbjct: 141 ISYDDEEGPQIFRVD 155
>gi|225708302|gb|ACO09997.1| Proteasome subunit alpha type 3 [Osmerus mordax]
Length = 255
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D +E + ++ G++ LS R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLSEVAREEASNFRSNYGHDIPLKHLSDRVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ +D ++GPQL+ +D
Sbjct: 133 GCSFILGSYDQDDGPQLYMVD 153
>gi|1405325|dbj|BAA10933.1| LMP7 of nurse shark [Ginglymostoma cirratum]
Length = 274
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D V + +AK ++YK+RN +S AA+ ++EY + +I
Sbjct: 115 MSGSAADCVFWERMLAKQCRIYKLRNKKRISVSAASKLLANMVSEY--KGMGLSMGTMIC 172
Query: 63 GHDPEEGPQLFFID 76
G D E+GP L++++
Sbjct: 173 GWD-EKGPGLYYVN 185
>gi|386002905|ref|YP_005921204.1| proteasome subunit beta [Methanosaeta harundinacea 6Ac]
gi|357210961|gb|AET65581.1| Proteasome subunit beta [Methanosaeta harundinacea 6Ac]
Length = 179
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+ G GD I +LY M+ G ++ R T L+ L SR P+
Sbjct: 22 LTTAGVVGDAQSLVRMIQVESKLYNMQRGEPMTVRG----TTSLLSNVLASRRYFPFMVQ 77
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIE 83
+L+ G D ++GPQLF +D L I+
Sbjct: 78 LLLGGVD-KKGPQLFSLDALGGSIQ 101
>gi|225703246|gb|ACO07469.1| Proteasome subunit alpha type 3 [Oncorhynchus mykiss]
Length = 255
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGY-----ELSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D +E ++ ++ G+ LS R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLSEVAREDASNFRSNYGHNIPLKHLSERVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ +D ++GPQL+ +D
Sbjct: 133 GCSFILGSYDQDDGPQLYMVD 153
>gi|389852762|ref|YP_006354996.1| proteasome, subunit beta [Pyrococcus sp. ST04]
gi|388250068|gb|AFK22921.1| putative proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 173
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+A GD GD + + +LYK G +S +A A LA L PY
Sbjct: 19 IAGAGDVGDILSLVRLLRAEARLYKANVGKPMSVKALA----TLLANILNGTKYFPYFVW 74
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHG 90
L+ G+D E P++F +D + E Y+ G
Sbjct: 75 FLVGGYDEE--PRMFSVDMAGGVTEDKYVAAG 104
>gi|395645475|ref|ZP_10433335.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
gi|395442215|gb|EJG06972.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
Length = 212
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M G GD A + LYK+R+G +S AAA L+ YL+ PY
Sbjct: 54 MTTAGGVGDAQSLARLMQVECSLYKVRHGKPISVGAAATL----LSNYLQQNRYYPYYVQ 109
Query: 59 MLIAGHDPEEGPQLFFIDYLA 79
+L+ G D GP ++ +D +
Sbjct: 110 LLVGGVD-RNGPSVYSVDAMG 129
>gi|169867685|ref|XP_001840421.1| proteasome subunit [Coprinopsis cinerea okayama7#130]
gi|116498582|gb|EAU81477.1| proteasome subunit [Coprinopsis cinerea okayama7#130]
Length = 274
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTR-KQLAEYLRSRSPYNCNMLIAG 63
G + DT I+ N++L+ ++ G + PR T KQ+ R + +++ G
Sbjct: 84 GTAADTEFTTNLISSNMELHALQTGRK--PRVVTAMTMLKQM--LFRYQGHIGAALVLGG 139
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV 116
D GP LF I S ++PY+T G + +++ R+ +++ +N+
Sbjct: 140 VDAT-GPHLFTIHPHGSTDKLPYVTMGSGSLAAMAVFESGWRANMEREEALNL 191
>gi|324520113|gb|ADY47564.1| Proteasome subunit alpha type-6 [Ascaris suum]
Length = 215
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 34/61 (55%), Gaps = 14/61 (22%)
Query: 24 YKMRNGY-----ELSPRAA---AYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFFI 75
+K NGY ELS R A YYT Q AE LRS C ML+ +D EEGPQ+F +
Sbjct: 101 WKYENGYNMSIEELSRRMADLNQYYT--QNAE-LRS---LGCVMLLISYDDEEGPQIFRV 154
Query: 76 D 76
D
Sbjct: 155 D 155
>gi|119719309|ref|YP_919804.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595733|sp|A1RX71.1|PSB2_THEPD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119524429|gb|ABL77801.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 204
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYL---RSRSPYNC 57
MA G D A + ++LY++ + +SP+ +T +L Y+ R PY
Sbjct: 48 MASAGLMADMQTLARIVEAEMRLYELDS--NISPKV---WTVAKLLSYILYERRLFPYYA 102
Query: 58 NMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
+++ G D EEG L+ +D + ++IE Y+ G + +SI+ ++ ++
Sbjct: 103 EIVVGGLD-EEGSHLYSLDPIGAIIEDDYVALGSGTQLAISIVESNYKKDMS 153
>gi|14591201|ref|NP_143277.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|17380245|sp|O50110.1|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
[Pyrococcus horikoshii OT3]
Length = 207
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 24/152 (15%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQL--AEYLRSRSPYNCN 58
+A GD GD + + +LY ++G +S +A A + A+Y PY
Sbjct: 53 IAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYF----PYLAW 108
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ--------- 109
L+ G+D E P+L+ +D + + E Y T G SI+ ++ +
Sbjct: 109 FLVGGYD--EKPKLYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAV 166
Query: 110 -------KRLIINVPNFKVTMVSKDGIKHLPP 134
KR + + V ++K+G K L
Sbjct: 167 KAINTAIKRDVFSGDGILVVTITKEGYKELSD 198
>gi|325968211|ref|YP_004244403.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323707414|gb|ADY00901.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 219
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 15 EFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFF 74
A IQ YK+ G +S RA A Y L + Y +M++ G DP+EGP ++
Sbjct: 77 SLTATAIQ-YKVDTGKPISIRALANYA--SLVVFSSRPFVYLVHMILGGWDPDEGPVIYM 133
Query: 75 IDYLASL 81
+D+ +L
Sbjct: 134 LDFFGTL 140
>gi|226471394|emb|CAX70778.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
Length = 205
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT I+ ++L+++ G +PR A + L YL Y L+ G
Sbjct: 85 GTAADTQMVTLMISSQVELHRLNTGR--TPRVIA--PLRLLKRYLYQYQGYVGAALVLGG 140
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM 100
GP LF I S ++PYIT G + +S++
Sbjct: 141 VDSTGPHLFSIAPHGSTDKLPYITMGSGSLACMSVL 176
>gi|307595676|ref|YP_003901993.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307550877|gb|ADN50942.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 205
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 54 PYNCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ---- 109
PY +L+ G D +EGP LF +D L SLIE Y G + ++I+ ++ +
Sbjct: 103 PYFVEVLVGGVD-DEGPHLFIMDSLGSLIEDDYAAVGTGTKLAIAILESNYKPSMTVKEA 161
Query: 110 KRLIINVPNFKVTM--VSKDGIKHL 132
+ L I N ++ VS DGI L
Sbjct: 162 RELAIKAINQSISRDPVSGDGIDIL 186
>gi|45358258|ref|NP_987815.1| proteasome subunit beta [Methanococcus maripaludis S2]
gi|340623725|ref|YP_004742178.1| proteasome subunit beta [Methanococcus maripaludis X1]
gi|74555067|sp|Q6LZD4.1|PSB_METMP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|44921015|emb|CAF30251.1| proteasome, subunit beta [Methanococcus maripaludis S2]
gi|339903993|gb|AEK19435.1| proteasome subunit beta [Methanococcus maripaludis X1]
Length = 219
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 19/147 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G GD I+ ++YKMR G ++P + L + P ++
Sbjct: 57 MTIAGSVGDAQSLIRLISAEAKIYKMRTGNNMTPLSCTTLISNVL--HGNRHYPLLTQLI 114
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTL-SIMGEYHRSE--VQKRLIINVP 117
+ G+D G +LF +D + + E T G T ++ ++S+ ++K L+I V
Sbjct: 115 LGGYDLINGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLESEYKSDIAIEKGLLIAVK 174
Query: 118 NFKVTM--------------VSKDGIK 130
M ++KDG+K
Sbjct: 175 ALSSAMQRDAYSGNGISLAHINKDGVK 201
>gi|229366168|gb|ACQ58064.1| Proteasome subunit alpha type-3 [Anoplopoma fimbria]
Length = 255
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D +E ++ G++ LS R A Y L +R P+
Sbjct: 76 MAVAGLLADARPLSEVARDEASSFRSSYGHDIPLKHLSDRVAMYVHTYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGI 94
C+ ++ +D ++GPQL+ ++ I+HGY G
Sbjct: 133 GCSFILGSYDKDDGPQLYMVNPSG-------ISHGYWGC 164
>gi|308321466|gb|ADO27884.1| proteasome subunit alpha type-3 [Ictalurus furcatus]
Length = 255
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D AE + ++ G++ L+ R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLAEVSREEASNFRSNYGHDIPLKHLADRVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ +D ++GPQL+ +D
Sbjct: 133 GCSFILGSYDEDDGPQLYMVD 153
>gi|318103605|ref|NP_001187447.1| proteasome subunit alpha type-3 [Ictalurus punctatus]
gi|308323031|gb|ADO28653.1| proteasome subunit alpha type-3 [Ictalurus punctatus]
Length = 255
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D AE + ++ G++ L+ R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLAEVSREEASNFRSNYGHDIPLKHLADRVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ +D ++GPQL+ +D
Sbjct: 133 GCSFILGSYDEDDGPQLYMVD 153
>gi|321253908|ref|XP_003192894.1| proteasome subunit, beta type, 7 [Cryptococcus gattii WM276]
gi|317459363|gb|ADV21107.1| Proteasome subunit, beta type, 7, putative [Cryptococcus gattii
WM276]
Length = 303
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 22/145 (15%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYL-RSRSPYNCNMLIAG 63
G + DT I+ N++L+ + G + A L +YL R + ++++ G
Sbjct: 91 GTAADTEFVTNLISSNLELHALSQGRQ----ARIVTAMTMLKQYLFRYQGHVGAHLVLGG 146
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV------- 116
D GPQLF + S ++PY+T G + +++ + + ++ I++
Sbjct: 147 VDAT-GPQLFTVHAHGSTDKLPYVTMGSGSLAAMAVFESSFKEHMTRQEAIDLVARAIRS 205
Query: 117 ---------PNFKVTMVSKDGIKHL 132
N V +++K+G + L
Sbjct: 206 GVFNDLGSGSNVDVAVITKNGTEML 230
>gi|225192978|dbj|BAH29683.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193050|dbj|BAH29663.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LYK+RN + +S AA+ K L + +M +
Sbjct: 113 MSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS----KLLCNMMLGYRGMGLSMGSM 168
Query: 61 IAGHDPEEGPQLFFIDY 77
I G D +EGP L+++D+
Sbjct: 169 ICGWD-KEGPGLYYVDH 184
>gi|88602139|ref|YP_502317.1| proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
gi|121724010|sp|Q2FQL8.1|PSB_METHJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|88187601|gb|ABD40598.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanospirillum hungatei
JF-1]
Length = 209
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+ G GD Q A + LY++R G +S +AA+ L+ L P+
Sbjct: 53 LTTAGGVGDAQQLARLMTVEANLYEIRRGKRISVQAASTL----LSNILHGNRMFPFYVQ 108
Query: 59 MLIAGHDPEEGPQLFFIDYLA 79
+LI G D E GP LF +D +
Sbjct: 109 LLIGGVD-ETGPVLFSVDAVG 128
>gi|225193065|dbj|BAH29673.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LYK+RN + +S AA+ K L + +M +
Sbjct: 113 MSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS----KLLCNMMLGYRGMGLSMGSM 168
Query: 61 IAGHDPEEGPQLFFIDY 77
I G D +EGP L+++D+
Sbjct: 169 ICGWD-KEGPGLYYVDH 184
>gi|390190130|dbj|BAM20999.1| proteasome subunit beta type-8, partial [Polypterus senegalus]
Length = 226
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D V + +A++ ++YK+RN E++ AA+ LA Y + +I
Sbjct: 67 MSGSAADCVYWERVLAQHCRIYKLRNKEEITVSAASKLLSNMLAGY--RGMGLSIGSMIC 124
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
G D ++GP L+++D + + + G +M HR ++
Sbjct: 125 GWD-KKGPGLYYVDENGTRLSGNMFSTGSGHSYAYGVMDSGHRYDL 169
>gi|156096783|ref|XP_001614425.1| 20S proteasome beta subunit [Plasmodium vivax Sal-1]
gi|148803299|gb|EDL44698.1| 20S proteasome beta subunit, putative [Plasmodium vivax]
Length = 273
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
+ G + D + + +++ K I++Y++RN ++S RAA+ L +Y C +++
Sbjct: 106 TMAGGAADCLYWEKYLGKIIKIYELRNNEKISVRAASTILSNILYQY--KGYGLCCGIIL 163
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM 100
+G+D G +F+ID +E + G SI+
Sbjct: 164 SGYD-HTGFNMFYIDDEGKKVEGNLFSCGSGSTYAYSIL 201
>gi|388856150|emb|CCF50330.1| probable 20S proteasome beta2 subunit [Ustilago hordei]
Length = 289
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYT--RKQLAEYLRSRSPYNCNMLIA 62
G + DT + I+ N+QL+++ G + PR T +++L +Y + +++
Sbjct: 88 GTAADTEFVTQLISSNMQLHELNTGRQ--PRVVTAMTMLKQRLFQY---QGNIGAALVLG 142
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM 100
G+D GP LF + S ++PY+T G + +++
Sbjct: 143 GYDAT-GPHLFTVAPHGSTDKLPYVTMGSGSLAAMAVF 179
>gi|330835873|ref|YP_004410601.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
gi|329568012|gb|AEB96117.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
Length = 196
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 8 GDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPE 67
GD + NI+ Y++ N +S +AAA L +Y P+ +L G D
Sbjct: 54 GDLQALTRIMNANIKYYELYNNRPISTKAAAKLLSIILYQY--KYMPFISEVLFGGVDDG 111
Query: 68 EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM-GEYHRS 106
+ PQL+ +D L SL++ Y G V++ ++ EY+ S
Sbjct: 112 Q-PQLYVLDPLGSLLDDVYAAVGSGARVSIGVLEAEYNES 150
>gi|297619257|ref|YP_003707362.1| proteasome endopeptidase complex subunit beta [Methanococcus voltae
A3]
gi|297378234|gb|ADI36389.1| proteasome endopeptidase complex, beta subunit [Methanococcus
voltae A3]
Length = 215
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G GD I+ ++YKMR G +SP A L + P ++
Sbjct: 53 MTIAGSVGDAQSLVRIISAETKIYKMRTGNNMSPLACTTLMSNVL--HGNRHFPLMNQLI 110
Query: 61 IAGHD-PEEGPQLFFIDYLASLIEIPYITHGYPG 93
+ G+D + PQL+ +D + + E T G
Sbjct: 111 VGGYDVCNDEPQLYSLDAVGGINEETTFTSTGSG 144
>gi|443898240|dbj|GAC75577.1| 20S proteasome, regulatory subunit beta type PSMB7/PSMB10/PUP1
[Pseudozyma antarctica T-34]
Length = 294
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYT--RKQLAEYLRSRSPYNCNMLIA 62
G + DT + I+ N+QL+++ G + PR T +++L +Y + +++
Sbjct: 90 GTAADTEFVTQLISSNMQLHELNTGRQ--PRVVTAMTMLKQRLFQY---QGHIGAALVLG 144
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM 100
G+D GP LF + S ++PY+T G + +++
Sbjct: 145 GYDAT-GPHLFTVAPHGSTDKLPYVTMGSGSLAAMAVF 181
>gi|71834518|ref|NP_001025358.1| proteasome subunit alpha type-3 [Danio rerio]
gi|66911343|gb|AAH97109.1| Zgc:114044 [Danio rerio]
Length = 255
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D +E + ++ G++ L+ R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLSEVAREEASSFRSNYGHDIPLKHLADRVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ +D ++GPQL+ +D
Sbjct: 133 GCSFILGSYDEDDGPQLYMVD 153
>gi|62955555|ref|NP_001017791.1| proteasome subunit beta type 8 [Danio rerio]
gi|62531305|gb|AAH92889.1| Zgc:110346 [Danio rerio]
gi|182890838|gb|AAI65541.1| Zgc:110346 [Danio rerio]
Length = 277
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G++ D V + +AK ++YK+RN +S AA+ +AEY + ++
Sbjct: 117 MSGNAADCVYWERRLAKECRIYKLRNKTRISVAAASKLLANMVAEY--RGMGLSMGTMVC 174
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
G D + GP L+++ + + + G +M HR ++
Sbjct: 175 GWD-QRGPGLYYVSSSGTRLAGDMFSTGSGCNYAYGVMDSGHRWDL 219
>gi|389583316|dbj|GAB66051.1| 20S proteasome beta subunit, partial [Plasmodium cynomolgi strain
B]
Length = 268
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
+ G + D + + +++ K I++Y++RN ++S RAA+ L +Y C +++
Sbjct: 103 TMAGGAADCLYWEKYLGKIIKIYELRNNEKISVRAASTILSNILYQY--KGYGLCCGIIL 160
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM 100
+G+D G +F+ID +E + G SI+
Sbjct: 161 SGYD-HTGFNMFYIDDEGKKVEGNLFSCGSGSTYAYSIL 198
>gi|410931042|ref|XP_003978905.1| PREDICTED: proteasome subunit beta type-7-like [Takifugu rubripes]
gi|10803371|emb|CAC13118.1| low molecular mass polypeptide subunit PSMB10 [Takifugu rubripes]
Length = 275
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 65/146 (44%), Gaps = 20/146 (13%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + + ++ N+ ++ + +G + PR Q Y R N+++ G
Sbjct: 88 GTAADTQKTTDLLSSNLTIFSLNSGRK--PRVVMAVNILQDTLY-RYHGQIGANLILGGV 144
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM--GEYHRSEVQK-----RLIINVP 117
D G L+ + S+ ++PY+T G + L I+ G H EV++ RL I+
Sbjct: 145 DCT-GNHLYKVGPYGSVDKVPYLTMGSGDLAALGILEDGFKHDMEVERATELVRLAIHAG 203
Query: 118 ---------NFKVTMVSKDGIKHLPP 134
N + ++++D + ++ P
Sbjct: 204 IMSDLGSGNNIDICVITRDRVDYIRP 229
>gi|315518872|dbj|BAJ51767.1| proteasome subunit, beta type 8 [Oryzias matanensis]
Length = 272
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LYK+RN + +S AA+ K L+ + +M +
Sbjct: 113 MSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 168
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 169 ICGWD-KEGPGLYYVD 183
>gi|20094664|ref|NP_614511.1| protease subunit of the proteasome [Methanopyrus kandleri AV19]
gi|74559570|sp|Q8TW10.1|PSB_METKA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19887825|gb|AAM02441.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
Length = 210
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G D + + + +LY++R+ +S RA A L L++ PY +++ G
Sbjct: 57 GSVADAQKIVDLMRAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGF 116
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHG 90
+ ++ P L+ +D S+IE Y G
Sbjct: 117 NDDD-PALYNLDPSGSIIEEDYTATG 141
>gi|334323745|ref|XP_001377227.2| PREDICTED: proteasome subunit beta type-8-like [Monodelphis
domestica]
Length = 268
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RNG +S AA+ + +Y + +I
Sbjct: 109 MSGCAADCQYWERLLAKECRLYRLRNGERISVSAASKLLSNMMCQY--RGMGLSMGSMIC 166
Query: 63 GHDPEEGPQLFFID 76
G D ++GP L+++D
Sbjct: 167 GWD-KKGPGLYYVD 179
>gi|1405327|dbj|BAA10934.1| LMP7 [Ginglymostoma cirratum]
Length = 278
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LYK+RN +S AA+ + EY + +I
Sbjct: 115 MSGSAADCQYWERLLAKQCRLYKLRNKQRISVSAASKLLSNMMCEY--RGMGLSMGSMIC 172
Query: 63 GHDPEEGPQLFFID 76
G D ++GP L+++D
Sbjct: 173 GWD-KKGPGLYYVD 185
>gi|66356810|ref|XP_625583.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
gi|46226580|gb|EAK87568.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
Length = 290
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYN--CNML 60
+ G + D + ++K +LY++RNG +S A+ K + Y+ ++
Sbjct: 124 MAGGAADCSYWERVLSKLCRLYELRNGERISVAGAS----KMITNIFFHYRAYDLSAGIM 179
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ--------KRL 112
IAG D ++GP L+++D S ++ + G + ++ +R ++ KR
Sbjct: 180 IAGFD-KDGPHLYYVDNEGSRVKDCKFSVGSGSLYAYGVLDSGYRYDLTDEEAIDLGKRA 238
Query: 113 IINVPN--------FKVTMVSKDG-IKHLP 133
I+ N +V ++K+G IKH+P
Sbjct: 239 IVIATNRDGGSGGLVRVYQINKNGVIKHVP 268
>gi|374633938|ref|ZP_09706303.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
gi|373523726|gb|EHP68646.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
Length = 212
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 41 TRKQLAEYLR---SRS---PYNCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGI 94
T K LA YL S+S PY +LI G+D + P+LF +DYL + E Y+ G
Sbjct: 93 TVKALATYLTNILSQSKYFPYLVQILIGGYDVQ--PRLFNLDYLGDMTEETYVATGSGSP 150
Query: 95 VTLSIMGEYHR 105
V + ++ + +R
Sbjct: 151 VAMGVLEDGYR 161
>gi|221055227|ref|XP_002258752.1| 20S proteasome beta subunit [Plasmodium knowlesi strain H]
gi|193808822|emb|CAQ39524.1| 20S proteasome beta subunit, putative [Plasmodium knowlesi strain
H]
Length = 270
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G + D + + +++ K I++Y++RN ++S RAA+ L +Y C ++++
Sbjct: 104 MAGGAADCLYWEKYLGKIIKIYELRNNEKISVRAASTILSNILYQY--KGYGLCCGIILS 161
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM 100
G+D G +F+ID +E + G SI+
Sbjct: 162 GYD-HTGFNMFYIDDEGKKVEGNLFSCGSGSTYAYSIL 198
>gi|150403635|ref|YP_001330929.1| proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159904582|ref|YP_001548244.1| proteasome endopeptidase complex [Methanococcus maripaludis C6]
gi|302595750|sp|A9A788.1|PSB_METM6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595838|sp|A6VK02.1|PSB_METM7 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150034665|gb|ABR66778.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159886075|gb|ABX01012.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
Length = 219
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 5/126 (3%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G GD I+ ++YKMR G ++P + L + P ++
Sbjct: 57 MTIAGSVGDAQSLIRLISAEAKIYKMRTGNNMTPLSCTTLISNVL--HGNRHYPLLTQLI 114
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTL-SIMGEYHRSEV--QKRLIINVP 117
+ G+D G +LF +D + + E T G T ++ +RS+V K L++ V
Sbjct: 115 LGGYDLINGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVK 174
Query: 118 NFKVTM 123
M
Sbjct: 175 ALSSAM 180
>gi|170595731|ref|XP_001902498.1| Proteasome A-type and B-type family protein [Brugia malayi]
gi|158589802|gb|EDP28656.1| Proteasome A-type and B-type family protein [Brugia malayi]
Length = 277
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G + D + +AK LY++R E++ AA+ Y + L Y + +IA
Sbjct: 107 MAGGAADCQFWTRIVAKYCTLYELREKTEITVAAASKYFQNVLYSY--RNHGLSVGSMIA 164
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR 105
G+D + GP +F +D I++ + G + I+ ++R
Sbjct: 165 GYD-KRGPAIFKVDSEGQRIQLRLCSIGSGSLSAYGILDNFYR 206
>gi|315518881|dbj|BAJ51773.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
Length = 272
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LYK+RN + +S AA+ K L+ + +M +
Sbjct: 113 MSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 168
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 169 ICGWD-KEGPGLYYVD 183
>gi|315518863|dbj|BAJ51761.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 272
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LYK+RN + +S AA+ K L+ + +M +
Sbjct: 113 MSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 168
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 169 ICGWD-KEGPGLYYVD 183
>gi|386868059|dbj|BAM15299.1| proteasome subunit beta type 8, partial [Triakis scyllium]
Length = 202
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LYK+RN +S AA+ + EY + +I
Sbjct: 67 MSGSAADCQYWERLLAKQCRLYKLRNKQRISVSAASKLLSNMMCEY--RGMGLSMGSMIC 124
Query: 63 GHDPEEGPQLFFID 76
G D ++GP L+++D
Sbjct: 125 GWD-KKGPGLYYVD 137
>gi|330508619|ref|YP_004385047.1| proteasome subunit beta [Methanosaeta concilii GP6]
gi|328929427|gb|AEB69229.1| proteasome subunit beta [Methanosaeta concilii GP6]
Length = 206
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
M G GD + +LYKM+ G L+ +A LA L SR P+
Sbjct: 50 MTTAGGVGDAQSLVRMVQVEARLYKMQRGEGLTVKAVT----TMLANILSSRRYYPFMVQ 105
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIE 83
+++ G D GP+++ +D L IE
Sbjct: 106 LIMGGVD-RYGPRIYSLDALGGQIE 129
>gi|209730378|gb|ACI66058.1| Proteasome subunit alpha type-3 [Salmo salar]
Length = 255
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGY-----ELSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D +E + ++ G+ LS R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLSEVAREEASNFRSNYGHNIPLKHLSERVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ +D ++GPQL+ +D
Sbjct: 133 GCSFILGSYDQDDGPQLYMVD 153
>gi|146305014|ref|YP_001192330.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
5348]
gi|302595851|sp|A4YJ04.1|PSB2_METS5 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145703264|gb|ABP96406.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Metallosphaera sedula DSM
5348]
Length = 196
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 8 GDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPE 67
GD + NI+ Y++ N +S RAAA L +Y P+ +L G D
Sbjct: 54 GDLQALTRIMNANIKYYELYNNRPISTRAAAKLLSIILYQY--KYMPFISEVLFGGVDNG 111
Query: 68 EGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM 100
E PQL+ +D L SL++ Y G V + ++
Sbjct: 112 E-PQLYVLDPLGSLLDDIYAAVGSGARVAIGVL 143
>gi|119719224|ref|YP_919719.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595702|sp|A1RWY6.1|PSB1_THEPD RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119524344|gb|ABL77716.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 200
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G GD Q + + + YK G + ++ A L +Y R + MLI
Sbjct: 57 IAGTVGDAQQLVDRLRVEARYYKTITGDSMPVKSVATLASLILFQY---RPILSVQMLIG 113
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVP 117
G D + GP LF +D+L ++ Y G +S++ +R ++ +N+
Sbjct: 114 GVDSD-GPSLFSVDWLGTVTREKYTATGSGSPYAVSLLEHEYREDLSLEEAVNLA 167
>gi|224001200|ref|XP_002290272.1| proteasome subunit beta type 5 precursor [Thalassiosira pseudonana
CCMP1335]
gi|220973694|gb|EED92024.1| proteasome subunit beta type 5 precursor [Thalassiosira pseudonana
CCMP1335]
Length = 276
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
+ G + D + + +LY++RN ++ +A+ K LA + S Y +M +
Sbjct: 111 MAGGAADCSFWERNLGMQCRLYELRNKKRITVASAS----KLLANTMSSYRGYGLSMGTM 166
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
I G D E GPQL+++D + + Y + G ++ Y+R ++
Sbjct: 167 ITGWD-ETGPQLYYVDDDGTRLHGRYFSVGSGSTYAYGVLDTYYRPDL 213
>gi|332373358|gb|AEE61820.1| unknown [Dendroctonus ponderosae]
Length = 279
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G + D V + +AK ++Y++RN +S AA+ + Y + M++A
Sbjct: 114 LAGGAADCVYWDRVLAKQCRMYELRNRERISVAAASKLMSNMVYNY--KGMGLSMGMMLA 171
Query: 63 GHDPEEGPQLFFID 76
G D + GPQL++ID
Sbjct: 172 GWD-KRGPQLYYID 184
>gi|374326224|ref|YP_005084424.1| proteasome subunit beta [Pyrobaculum sp. 1860]
gi|356641493|gb|AET32172.1| proteasome, beta subunit [Pyrobaculum sp. 1860]
Length = 203
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+A G D A+ + N + Y++ E+ + + + K L+ + SR P+
Sbjct: 51 IASAGIIADMQALAKILKLNAKSYEL----EMKKKPSVHAMAKLLSVVMFSRRFMPFFAE 106
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
+L+ G D EEGP L +D L SLIE Y G + +++ +R+++
Sbjct: 107 VLVGGVD-EEGPHLIVMDPLGSLIEDNYAALGTGAKLAAAVLDGNYRNDMS 156
>gi|337298923|ref|NP_001229673.1| proteasome subunit beta type-8 [Ornithorhynchus anatinus]
gi|156602028|gb|ABU86903.1| Psmb8 [Ornithorhynchus anatinus]
Length = 270
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY +RNG +S AA+ + +Y + +I
Sbjct: 111 MSGSAADCQYWERLLAKECRLYHLRNGERISVSAASKLLSNMMCQY--RGMGLSMGSMIC 168
Query: 63 GHDPEEGPQLFFID 76
G D ++GP L+++D
Sbjct: 169 GWD-KKGPGLYYVD 181
>gi|219567014|dbj|BAH05025.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 272
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LYK+RN + +S AA+ K L + +M +
Sbjct: 113 MSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS----KLLCNMMLGYRGMGLSMGSM 168
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 169 ICGWD-KEGPGLYYVD 183
>gi|209738180|gb|ACI69959.1| Proteasome subunit alpha type-3 [Salmo salar]
gi|223647206|gb|ACN10361.1| Proteasome subunit alpha type-3 [Salmo salar]
gi|223673081|gb|ACN12722.1| Proteasome subunit alpha type-3 [Salmo salar]
Length = 255
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D +E + ++ G+ LS R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLSEVAREEASNFRSNYGHNIPLKYLSERVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ +D ++GPQL+ +D
Sbjct: 133 GCSFILGSYDQDDGPQLYMVD 153
>gi|57529899|ref|NP_001006491.1| proteasome subunit alpha type-3 [Gallus gallus]
gi|53129746|emb|CAG31411.1| hypothetical protein RCJMB04_6b22 [Gallus gallus]
Length = 255
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D A+ + ++ GY+ L+ R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLADIAREEASNFRTNYGYDIPLKHLADRVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ +D ++G QL+ ID
Sbjct: 133 GCSFMLGSYDDDDGAQLYMID 153
>gi|410903362|ref|XP_003965162.1| PREDICTED: proteasome subunit beta type-7-like [Takifugu rubripes]
Length = 277
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G +PR A + L + L Y L+ G
Sbjct: 90 GTAADTEMTTQLISSNLELHSLSTGR--APRVAT--ANRMLKQMLFRYQGYIGAALVLGG 145
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQK 110
GP L+ I S ++PY+T G + +++ + +R ++++
Sbjct: 146 MDCNGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYRPDMEE 191
>gi|225703650|gb|ACO07671.1| Proteasome subunit alpha type 3 [Oncorhynchus mykiss]
Length = 255
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D +E + ++ G+ LS R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLSEVAREEASNFRSNYGHNIPLKYLSERVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ +D ++GPQL+ +D
Sbjct: 133 GCSFILGSYDQDDGPQLYMVD 153
>gi|219567064|dbj|BAH05050.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 272
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LYK+RN + +S AA+ K L + +M +
Sbjct: 113 MSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS----KLLCNMMLGYRGMGLSMGSM 168
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 169 ICGWD-KEGPGLYYVD 183
>gi|219567028|dbj|BAH05032.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 238
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LYK+RN +S AA+ K L + +M +
Sbjct: 79 MSGSAADCQHWERLLAKECRLYKLRNNQRISVAAAS----KLLCNMMLGYRGMGLSMGSM 134
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 135 ICGWD-KEGPGLYYVD 149
>gi|307596440|ref|YP_003902757.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307551641|gb|ADN51706.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 216
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 18 AKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFFIDY 77
A IQ YK+ G +S RA A Y L + Y +M+ G DP+EGP ++ +D+
Sbjct: 77 ATAIQ-YKIETGKPISIRALANYA--SLIVFSSRPFIYLVHMIFGGWDPDEGPVIYMLDF 133
Query: 78 LASLI-EIPYITHGYPGIVTLSIMGEYHRSEVQ 109
+L E ++ G ++ + +R ++
Sbjct: 134 FGTLTRETEFMATGSGSPTAFGVLEDGYRRDMS 166
>gi|18314179|ref|NP_560846.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74561745|sp|Q8ZST5.1|PSB2_PYRAE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18161769|gb|AAL65028.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 203
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+A G D A+ + N + Y++ E+ + + + + L+ + SR P+
Sbjct: 51 IASAGIIADMQTLAKILKLNAKAYEL----EMKRKPSTHSMARLLSVIMFSRRFMPFFAE 106
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
+L+ G D EEGP L +D L SLIE Y G + ++++ +R ++
Sbjct: 107 VLVGGID-EEGPHLIVMDPLGSLIEDNYAALGTGAKLAVAVLDTGYRPDI 155
>gi|312372646|gb|EFR20567.1| hypothetical protein AND_19880 [Anopheles darlingi]
Length = 257
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G + D V + +AK ++Y++RN +S AAA + Y + + M++A
Sbjct: 89 LAGGAADCVYWDRVLAKECRIYELRNKERISV-AAASKIMSNIVYYYKGMG-LSMGMMLA 146
Query: 63 GHDPEEGPQLFFID 76
G+D + GPQL++ID
Sbjct: 147 GYD-KRGPQLYYID 159
>gi|126179146|ref|YP_001047111.1| proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
gi|302595840|sp|A3CUS9.1|PSB_METMJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|125861940|gb|ABN57129.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanoculleus marisnigri
JR1]
Length = 214
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+ G GD Q + L++MR G +S AA+ L+ YL PY
Sbjct: 54 LTTAGGVGDAQQLVRILQVECNLFEMRRGKTMSVGAASTL----LSNYLNQNRYYPYYVQ 109
Query: 59 MLIAGHDPEEGPQLFFIDYLA 79
+L+ G D +EGP ++ +D +
Sbjct: 110 LLMGGFD-DEGPSVYSVDAMG 129
>gi|225193002|dbj|BAH29631.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193017|dbj|BAH29641.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LYK+RN + +S AA+ K L + +M +
Sbjct: 113 MSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS----KLLCNMMLGYRGMGLSMGSM 168
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 169 ICGWD-KEGPGLYYVD 183
>gi|6653277|gb|AAF22654.1| interferon-gamma inducible proteasome subunit LMP7 [Bos taurus]
Length = 193
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + + +AK +LY +RNG +S AA+ + +Y + +I
Sbjct: 42 MSGCAADCLYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQY--RGMGLSMGSMIC 99
Query: 63 GHDPEEGPQLFFID 76
G D ++GP L+++D
Sbjct: 100 GWD-KKGPGLYYVD 112
>gi|225192943|dbj|BAH29703.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LYK+RN + +S AA+ K L + +M +
Sbjct: 113 MSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS----KLLCNMMLGYRGMGLSMGSM 168
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 169 ICGWD-KEGPGLYYVD 183
>gi|124802189|ref|XP_001347396.1| 20S proteasome beta subunit, putative [Plasmodium falciparum 3D7]
gi|23494975|gb|AAN35309.1|AE014830_53 20S proteasome beta subunit, putative [Plasmodium falciparum 3D7]
Length = 271
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
+ G + D + + +++ K I++Y++RN ++S RAA+ L +Y C +++
Sbjct: 104 TMAGGAADCLYWEKYLGKIIKIYELRNNEKISVRAASTILSNILYQY--KGYGLCCGIIL 161
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM 100
+G+D G +F++D +E + G SI+
Sbjct: 162 SGYD-HTGFNMFYVDDSGKKVEGNLFSCGSGSTYAYSIL 199
>gi|388857650|emb|CCF48799.1| probable SCL1-20S proteasome subunit (alpha1) [Ustilago hordei]
Length = 300
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPR--AAAYYTRKQLAEYLRSRSPYNCNMLIA 62
D+ VQ A+ A + +K + GY ++P A Q+ + PY +M++
Sbjct: 82 ADARAQVQRAKMEAAD---FKYKYGYAITPDLLAKRMANMNQVYTQRAAMRPYGVSMILV 138
Query: 63 GHDPEEGPQLFFID 76
G DPE GPQ+F ID
Sbjct: 139 GIDPERGPQIFKID 152
>gi|225192964|dbj|BAH29691.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LYK+RN + +S AA+ K L + +M +
Sbjct: 113 MSGSAADCQYWERLLAKECRLYKLRNNHRISVAAAS----KLLCNMMLGYRGMGLSMGSM 168
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 169 ICGWD-KEGPGLYYVD 183
>gi|71022905|ref|XP_761682.1| hypothetical protein UM05535.1 [Ustilago maydis 521]
gi|46101159|gb|EAK86392.1| hypothetical protein UM05535.1 [Ustilago maydis 521]
Length = 249
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYT--RKQLAEYLRSRSPYNCNMLIA 62
G + DT + I+ N+QL+++ G + PR T +++L +Y + +++
Sbjct: 91 GTAADTEFVTQLISSNMQLHELNTGRQ--PRVVTAMTMLKQRLFQY---QGHIGAALVLG 145
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM 100
G+D GP LF + S ++PY+T G + +++
Sbjct: 146 GYDAT-GPHLFTVAPHGSTDKLPYVTMGSGSLAAMAVF 182
>gi|256084599|ref|XP_002578515.1| proteasome catalytic subunit 2 (T01 family) [Schistosoma mansoni]
gi|360045416|emb|CCD82964.1| proteasome catalytic subunit 2 (T01 family) [Schistosoma mansoni]
Length = 281
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 20/152 (13%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT I+ ++L+ + G +PR A + L YL Y L+ G
Sbjct: 85 GTAADTQMVTLMISSQVELHSLNTGR--TPRVIAPL--RLLKRYLYQYQGYVGAALVLGG 140
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV-------- 116
GP L+ I S ++PYIT G + +S++ + ++++ + +
Sbjct: 141 VDSTGPHLYSIAPHGSTDKLPYITMGSGSLACMSVLESRFKFDMEQDEAVKLVRDGIAAG 200
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKNI 140
N + +++KDG ++ N+
Sbjct: 201 IFNDMGSGSNVDICIITKDGTTYIRSYDEANV 232
>gi|157135040|ref|XP_001663403.1| proteasome subunit beta type 5,8 [Aedes aegypti]
gi|108870309|gb|EAT34534.1| AAEL013236-PA [Aedes aegypti]
Length = 282
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G + D V + +AK ++Y++RN +S AAA + Y + + M++A
Sbjct: 118 LAGGAADCVYWDRVLAKECRIYELRNKERISV-AAASKIMSNIVYYYKGMG-LSMGMMLA 175
Query: 63 GHDPEEGPQLFFID 76
G+D + GPQL++ID
Sbjct: 176 GYD-KRGPQLYYID 188
>gi|326921206|ref|XP_003206853.1| PREDICTED: proteasome subunit alpha type-3-like [Meleagris
gallopavo]
Length = 281
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D A+ + ++ GY+ L+ R A Y L +R P+
Sbjct: 102 MAVAGLLADARSLADIAREEASNFRTNYGYDIPLKHLADRVAMYVHAYTLYSAVR---PF 158
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ +D ++G QL+ ID
Sbjct: 159 GCSFMLGSYDEDDGAQLYMID 179
>gi|47203769|emb|CAG14438.1| unnamed protein product [Tetraodon nigroviridis]
Length = 156
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G +PR A + L + L Y L+ G
Sbjct: 5 GTAADTEMTTQLISSNLELHALSTGR--APRVAT--ANRMLKQMLFRYQGYIGAALVLGG 60
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQK 110
GP L+ I S ++PY+T G + +++ + +R ++++
Sbjct: 61 MDCNGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYRPDLEE 106
>gi|389747353|gb|EIM88532.1| N-terminal nucleophile aminohydrolase [Stereum hirsutum FP-91666
SS1]
Length = 218
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 5/126 (3%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G + DT A+++ +Q++ ++G AAA + +K E ++ + +++ G
Sbjct: 43 SGSAADTQAIADYVHYFLQMFSQQHGTPSVHTAAAMF-QKMCYE---NKDNLSAGIIVGG 98
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM-GEYHRSEVQKRLIINVPNFKVT 122
DPEEGP ++ I L P+ G Y + I V N
Sbjct: 99 WDPEEGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYQEGWGKDETIKWVKNTLAL 158
Query: 123 MVSKDG 128
+S+DG
Sbjct: 159 AMSRDG 164
>gi|170065467|ref|XP_001867951.1| proteasome subunit beta type 8 [Culex quinquefasciatus]
gi|167882529|gb|EDS45912.1| proteasome subunit beta type 8 [Culex quinquefasciatus]
Length = 263
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G + D V + +AK ++Y++RN +S AAA + Y + + M++A
Sbjct: 99 LAGGAADCVYWDRVLAKECRIYELRNKERISV-AAASKIMSNIVYYYKGMG-LSMGMMLA 156
Query: 63 GHDPEEGPQLFFID 76
G+D + GPQL++ID
Sbjct: 157 GYD-KRGPQLYYID 169
>gi|62079562|gb|AAX61127.1| proteasome endopeptidase complex chain XC8 [Oreochromis
mossambicus]
Length = 151
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G S D AE + ++ G++ LS R A Y L +R P+
Sbjct: 76 MAVAGLSADARSLAEVAREEAHNFRSNYGHDIPLKHLSDRVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFF 74
C+ + +D ++GPQL+
Sbjct: 133 GCSFHLGSYDEDDGPQLYM 151
>gi|387017836|gb|AFJ51036.1| Proteasome subunit alpha type-3-like [Crotalus adamanteus]
Length = 273
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 23/140 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D A+ + ++ GY L+ R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLADIAREEASNFRSNYGYNIPLNHLADRVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIIN 115
C+ ++ +D ++G QL+ ID +++GY G + + ++E++K + +
Sbjct: 133 GCSFMLGSYDDDDGAQLYMIDPSG-------VSYGYWG-CAIGKARQAAKTEIEKLQMKD 184
Query: 116 VPNFKVTMVSKDGIKHLPPI 135
M +D +K + I
Sbjct: 185 -------MTCRDAVKEVAKI 197
>gi|340345703|ref|ZP_08668835.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520844|gb|EGP94567.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 210
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 54 PYNCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSE------ 107
P+ ++L+ G+D GP LF ID S+ + Y+T G V ++ E +RS+
Sbjct: 106 PFMADILVGGYDAN-GPALFNIDMFGSVEQKSYVTTGSGSPVAYGLLEEEYRSDLTVEEA 164
Query: 108 -------VQKRLIINV---PNFKVTMVSKDGIKHLPPIKAKNIPE 142
V+ ++ N+ + ++ KDG + L + K + E
Sbjct: 165 KKIALRAVKAAIVRNIGTGDGINIAVMDKDGFRLLTEEQKKAVIE 209
>gi|219567044|dbj|BAH05040.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L+ + +M +
Sbjct: 79 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS----KLLSNMMLGYKGMGLSMGSM 134
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 135 ICGWD-KEGPGLYYVD 149
>gi|67588907|ref|XP_665380.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656042|gb|EAL35150.1| hypothetical protein Chro.50424 [Cryptosporidium hominis]
Length = 290
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 24/150 (16%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYN--CNML 60
+ G + D + ++K +LY++RNG +S A+ K + Y+ ++
Sbjct: 124 MAGGAADCSYWERVLSKLCRLYELRNGERISVAGAS----KMITNIFFHYRAYDLSAGIM 179
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ--------KRL 112
IAG D ++GP L+++D S ++ + G + ++ +R ++ KR
Sbjct: 180 IAGFD-KDGPHLYYVDNEGSRVKDCKFSVGSGSLYAYGVLDSGYRYDLTDEEAIDLGKRA 238
Query: 113 IINVPN--------FKVTMVSKDG-IKHLP 133
I+ N +V ++K G IKH+P
Sbjct: 239 IVIATNRDGGSGGLVRVYQINKSGVIKHVP 268
>gi|343426413|emb|CBQ69943.1| probable 20S proteasome beta2 subunit [Sporisorium reilianum SRZ2]
Length = 290
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYT--RKQLAEYLRSRSPYNCNMLIA 62
G + DT + I+ N+QL+++ G +PR T +++L +Y + +++
Sbjct: 91 GTAADTEFVTQLISSNMQLHELHTGR--APRVVTAMTMLKQRLFQY---QGHIGAALVLG 145
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSI 99
G+D GP LF + S ++PY+T G + +++
Sbjct: 146 GYDTT-GPHLFTVAPHGSTDKLPYVTMGSGSLAAMAV 181
>gi|219567054|dbj|BAH05045.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 243
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L+ + +M +
Sbjct: 84 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 139
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 140 ICGWD-KEGPGLYYVD 154
>gi|219567052|dbj|BAH05044.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L+ + +M +
Sbjct: 79 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 134
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 135 ICGWD-KEGPGLYYVD 149
>gi|118781366|ref|XP_559226.2| AGAP010718-PA [Anopheles gambiae str. PEST]
gi|116130136|gb|EAL41084.2| AGAP010718-PA [Anopheles gambiae str. PEST]
Length = 284
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G + D V + +AK ++Y++RN +S AAA + Y + + M++A
Sbjct: 118 LAGGAADCVYWDRVLAKECRIYELRNKERISV-AAASKIMSNIVYYYKGMG-LSMGMMLA 175
Query: 63 GHDPEEGPQLFFID 76
G+D + GPQL++ID
Sbjct: 176 GYD-KRGPQLYYID 188
>gi|348541149|ref|XP_003458049.1| PREDICTED: proteasome subunit beta type-8-like [Oreochromis
niloticus]
Length = 275
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L+ + +M +
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 171
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 172 ICGWD-KEGPGLYYVD 186
>gi|108860908|sp|Q3T112.2|PSB8_BOVIN RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Proteasome subunit beta-5i; Flags: Precursor
gi|63169161|gb|AAY34697.1| proteasome subunit beta type 8 [Bos taurus]
gi|296474549|tpg|DAA16664.1| TPA: proteasome subunit beta type-8 precursor [Bos taurus]
Length = 276
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + + +AK +LY +RNG +S AA+ + +Y + +I
Sbjct: 117 MSGCAADCLYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQY--RGMGLSMGSMIC 174
Query: 63 GHDPEEGPQLFFID 76
G D ++GP L+++D
Sbjct: 175 GWD-KKGPGLYYVD 187
>gi|219567048|dbj|BAH05042.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L+ + +M +
Sbjct: 79 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 134
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 135 ICGWD-KEGPGLYYVD 149
>gi|449017225|dbj|BAM80627.1| 20S core proteasome subunit beta 2 [Cyanidioschyzon merolae strain
10D]
Length = 279
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYL-RSRSPYNCNMLIAG 63
G + DT + IA ++L++ +L P AAA +L YL R + + +++ G
Sbjct: 92 GTAADTEATTQLIASQMELHRQAVDRDLVPVAAAM---TRLKHYLFRYQGYISAALVLGG 148
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM-GEYHRS 106
D GP L+ + S+ ++PY++ G + +++ +H +
Sbjct: 149 VDELNGPSLYTVYPHGSVDQLPYVSMGSGSLAAMAVFEARWHEA 192
>gi|296109858|ref|YP_003616807.1| proteasome endopeptidase complex, beta subunit [methanocaldococcus
infernus ME]
gi|295434672|gb|ADG13843.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
infernus ME]
Length = 205
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+ + G GD ++ +LY+MR G +SP A L+ L S P+
Sbjct: 48 LTIAGSVGDAQSLVRYLTAEAKLYRMRTGKLMSPLACTTL----LSNILHSSRYFPFLVQ 103
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIE 83
M++ G D E+G +L+ +D L + E
Sbjct: 104 MIVGGFD-EKGFKLYSLDPLGGVNE 127
>gi|219567036|dbj|BAH05036.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L+ + +M +
Sbjct: 79 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 134
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 135 ICGWD-KEGPGLYYVD 149
>gi|311260174|ref|XP_001924154.2| PREDICTED: proteasome subunit beta type-8 [Sus scrofa]
gi|147225184|emb|CAN13316.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Sus scrofa]
Length = 276
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY +RNG +S AA+ + +Y + +I
Sbjct: 117 MSGSAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMYQY--RGMGLSMGSMIC 174
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
G D ++GP L+++D + + + G +M HR ++
Sbjct: 175 GWD-KKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDL 219
>gi|219567046|dbj|BAH05041.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L+ + +M +
Sbjct: 79 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 134
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 135 ICGWD-KEGPGLYYVD 149
>gi|307095116|gb|ADN29864.1| proteasome beta 2 subunit [Triatoma matogrossensis]
Length = 277
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 20/159 (12%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT IA ++L+++ G + R A ++ L Y Y L+ G
Sbjct: 86 GTAADTEMTTLTIASQLELHRLNTGRVVPVRTANRMLKQLLFRY----QGYIGAALVLGG 141
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM-GEYH---RSEVQKRLIINV---- 116
+GP L+ I S PY + G + +S++ ++H E K+L+ N
Sbjct: 142 IDNDGPHLYTIHPHGSTDNPPYTSMGSGSLAAMSVLESQWHPDMEEEEAKQLVRNAIIAG 201
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKNIPEENKGI 147
+ + ++ K+ ++++ P NI +GI
Sbjct: 202 IFNDLGSGSSCDICIIKKNAVEYIRPYDVANIKGVKQGI 240
>gi|219567020|dbj|BAH05028.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
gi|315518869|dbj|BAJ51765.1| proteasome subunit, beta type 8 [Oryzias matanensis]
gi|315518878|dbj|BAJ51771.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
Length = 275
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L+ + +M +
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVSAAS----KLLSNMMLGYRGMGLSMGSM 171
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 172 ICGWD-KEGPGLYYVD 186
>gi|219567050|dbj|BAH05043.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L+ + +M +
Sbjct: 79 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 134
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 135 ICGWD-KEGPGLYYVD 149
>gi|405962686|gb|EKC28337.1| Proteasome subunit beta type-7 [Crassostrea gigas]
Length = 275
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPR-AAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
G + DT + I+ ++L+++ G +PR A KQ+ R + + +++ G
Sbjct: 86 GTAADTEMTTQMISSQLELHRLNTGR--TPRVCTANRLLKQM--LFRYQGHISAALVLGG 141
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----SEVQKRLIINV--- 116
D GP L+ + S ++PY+T G + +++ + E K+L+ +
Sbjct: 142 VD-STGPHLYSVYPHGSTDKLPYVTMGSGSLAAMAVFERGFKPNMEKEEAKKLVRDAIAA 200
Query: 117 ---------PNFKVTMVSKDGIKHLPPIKAKNIPEENKG 146
N V +++KD + ++ P N+ + +G
Sbjct: 201 GIFNDLGSGSNVDVCVITKDKVDYIRPFDEANLKGQRQG 239
>gi|167536602|ref|XP_001749972.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771482|gb|EDQ85147.1| predicted protein [Monosiga brevicollis MX1]
Length = 246
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 24 YKMRNGYELSPRAAAYYTR--KQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFFID 76
+K + GYE+ P A QL S P C+M++ G D E GPQLF D
Sbjct: 101 WKYKFGYEIPPDQLAKRVADLSQLNTQEASLRPLGCSMILVGIDEERGPQLFKSD 155
>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595731|sp|B1YDJ0.1|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 203
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+A G D A+ + N + Y++ E+ + K L+ + SR P+
Sbjct: 51 IASAGIIADMQALAKILKLNARSYEL----EVKKKPTVKAMAKLLSVVMFSRRFMPFYAE 106
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR 105
+L+ G D EEGP L +D L SLIE Y G + +S++ +R
Sbjct: 107 VLVGGVD-EEGPHLIVMDPLGSLIEDNYAALGTGAKLAVSLLDASYR 152
>gi|84489103|ref|YP_447335.1| PsmB [Methanosphaera stadtmanae DSM 3091]
gi|121697945|sp|Q2NI68.1|PSB_METST RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|84372422|gb|ABC56692.1| PsmB [Methanosphaera stadtmanae DSM 3091]
Length = 205
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 22/132 (16%)
Query: 15 EFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFF 74
+ + I LYK+RN ++S A A T + L+SR PY ++AG D ++G +L+
Sbjct: 66 DILKAEISLYKLRNEKDMSIDALAVLT----SNILKSR-PYYVQTILAGVD-KDGAKLYT 119
Query: 75 IDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----------------KRLIINVPN 118
+D S I + + G ++ + + ++ +R + + N
Sbjct: 120 LDPSGSYIPDTFTSTGSGSPYAFGVLEDRYNEDITTEEGKKIAIKAITSAMERDVYSGNN 179
Query: 119 FKVTMVSKDGIK 130
+++ +++KDG+K
Sbjct: 180 YRLGVITKDGMK 191
>gi|91085931|ref|XP_970194.1| PREDICTED: similar to proteasome subunit beta type 5,8 [Tribolium
castaneum]
Length = 279
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G + D V + +AK ++Y++RN +S AA+ + Y + M++A
Sbjct: 114 LAGGAADCVYWDRVLAKQCRMYELRNRERISVAAASKLMANMVYNY--KGMGLSMGMMLA 171
Query: 63 GHDPEEGPQLFFID 76
G D + GPQL+++D
Sbjct: 172 GWD-KRGPQLYYVD 184
>gi|315518883|dbj|BAJ51774.1| proteasome subunit, beta type 8 [Oryzias dancena]
Length = 238
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L+ + +M +
Sbjct: 79 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 134
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 135 ICGWD-KEGPGLYYVD 149
>gi|332021957|gb|EGI62287.1| Proteasome subunit beta type-7 [Acromyrmex echinatior]
Length = 277
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT E IA ++L+++ G + P A KQ+ R + +++ G
Sbjct: 86 GTAADTEMTTEMIASQLELHRLNTG-RVVPVCTANTLIKQM--LFRYQGHIGAALILGGF 142
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR----SEVQKRLIINV---- 116
D + GPQL+ I S ++ Y T G + +S++ + E K+L+ +
Sbjct: 143 DLD-GPQLYCIYPHGSTEKLKYTTMGSGSLAAMSVLESTWKPDMSEEEAKKLVADAIRAG 201
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKNIPEENKGI 147
N + ++ K+ +++L P ++ KGI
Sbjct: 202 VFNDLASGSNVDLCIIRKNSVEYLRPYDTASV----KGI 236
>gi|327289964|ref|XP_003229694.1| PREDICTED: proteasome subunit beta type-8-like [Anolis
carolinensis]
Length = 230
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY +RN +S AA+ L EY + ++
Sbjct: 71 MSGCAADCQYWERLLAKQCRLYYLRNKERISVSAASKLLANMLCEY--RGMGLSVGSMVC 128
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
G D ++GP L++ID + P + G ++ HR ++
Sbjct: 129 GWD-KKGPGLYYIDDNGVRLSGPLFSTGSGNTYAYGVLDSGHRPDL 173
>gi|18124200|gb|AAL59861.1|AF363582_1 proteasome beta-subunit LMP7-like protein [Heterodontus francisci]
Length = 285
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D V + +AK+ ++YK+RN +S AA+ ++EY + +I
Sbjct: 115 MSGSAADCVYWERMLAKHCRIYKLRNKKRISVSAASKLLANMVSEY--KGMGLSMGTMIC 172
Query: 63 GHDPEEGPQLFFI 75
G D ++GP L+++
Sbjct: 173 GWD-DKGPGLYYV 184
>gi|161529236|ref|YP_001583062.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595719|sp|A9A2U7.1|PSB2_NITMS RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|160340537|gb|ABX13624.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 210
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 54 PYNCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSE------ 107
P+ ++L+ G+D E GP LF ID S+ + Y+T G V ++ E +R +
Sbjct: 106 PFMADILVGGYDAE-GPALFNIDMFGSVEKKAYVTTGSGSPVAYGLLEEEYREDLTVEEA 164
Query: 108 -------VQKRLIINV---PNFKVTMVSKDGIKHLPPIKAKNIPE 142
V+ ++ N+ + ++ KDG + L + K + E
Sbjct: 165 KKIALRAVKAAIVRNIGTGDGINIAIMDKDGFRLLTEEQKKAVIE 209
>gi|386868057|dbj|BAM15298.1| proteasome subunit beta type 8, partial [Triakis scyllium]
Length = 194
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D V + +AK ++YK+RN +S AA+ ++EY + +I
Sbjct: 67 MSGSAADCVYWERMLAKQCRIYKLRNKKRISVSAASKLLANMVSEY--KGMGLSMGTMIC 124
Query: 63 GHDPEEGPQLFFI 75
G D ++GP L+++
Sbjct: 125 GWD-DKGPGLYYV 136
>gi|113196863|gb|ABI31729.1| low molecular mass protein 7 [Sus scrofa]
Length = 249
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY +RNG +S AA+ + +Y + +I
Sbjct: 90 MSGSAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMYQY--RGMGLSMGSMIC 147
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
G D ++GP L+++D + + + G +M HR ++
Sbjct: 148 GWD-KKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLS 193
>gi|315518860|dbj|BAJ51759.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 275
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L+ + +M +
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 171
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 172 ICGWD-KEGPGLYYVD 186
>gi|449278490|gb|EMC86312.1| Proteasome subunit alpha type-3, partial [Columba livia]
Length = 248
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D A+ + ++ GY+ L+ R A Y L +R P+
Sbjct: 69 MAVAGLLADARSLADVAREEASNFRSNYGYDIPLKHLADRVAMYVHAYTLYSAVR---PF 125
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ +D ++G QL+ ID
Sbjct: 126 GCSFMLGSYDEDDGAQLYMID 146
>gi|52547780|gb|AAU81925.1| low molecular mass protein 7, partial [Marmota monax]
Length = 156
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY +RNG +S AA+ + +Y + +I
Sbjct: 34 MSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQY--RGMGLSMGSMIC 91
Query: 63 GHDPEEGPQLFFIDY 77
G D ++GP L+++D+
Sbjct: 92 GWD-KKGPGLYYVDH 105
>gi|219567018|dbj|BAH05027.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 275
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L+ + +M +
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 171
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 172 ICGWD-KEGPGLYYVD 186
>gi|114606761|ref|XP_001167241.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Pan
troglodytes]
gi|410220160|gb|JAA07299.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410257296|gb|JAA16615.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410287542|gb|JAA22371.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410332769|gb|JAA35331.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
Length = 272
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY +RNG +S AA+ + +Y + +I
Sbjct: 113 MSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQY--RGMGLSMGSMIC 170
Query: 63 GHDPEEGPQLFFID 76
G D ++GP L+++D
Sbjct: 171 GWD-KKGPGLYYVD 183
>gi|134045918|ref|YP_001097404.1| proteasome subunit beta [Methanococcus maripaludis C5]
gi|302595749|sp|A4FYA5.1|PSB_METM5 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|132663543|gb|ABO35189.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanococcus maripaludis
C5]
Length = 219
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 19/147 (12%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G GD I+ +++KMR G ++P + L + P ++
Sbjct: 57 MTIAGSVGDAQSLIRIISAEAKIHKMRTGNNMTPLSCTTLISNVL--HGNRHYPLLTQLI 114
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTL-SIMGEYHRSEV--QKRLIINVP 117
+ G+D G +LF +D + + E T G T ++ +RS+V K L++ V
Sbjct: 115 LGGYDLINGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVK 174
Query: 118 NFKVTM--------------VSKDGIK 130
M ++KDG+K
Sbjct: 175 ALSSAMQRDAYSGNGISLAHINKDGVK 201
>gi|193716044|ref|XP_001950162.1| PREDICTED: proteasome subunit alpha type-3-like [Acyrthosiphon
pisum]
Length = 253
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 32 LSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFFID 76
L+ R + Y L +R P+ C ++I +DP+EGPQ++ ID
Sbjct: 112 LNERVSMYIHAHTLYSAIR---PFGCAVIIGSYDPKEGPQMYMID 153
>gi|305662490|ref|YP_003858778.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304377059|gb|ADM26898.1| proteasome endopeptidase complex, beta component [Ignisphaera
aggregans DSM 17230]
Length = 236
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
+ + G D A++I Y N +S R+ A L EY P+ ++
Sbjct: 74 ITIAGLVADAQTLADYIRAEAYYYYYINNRPMSIRSMASLLGLILNEY--KYFPFIVQLI 131
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
+ G+D EG +LF IDY + E Y G + + ++ +R E+
Sbjct: 132 LGGYDYYEGAKLFSIDYFGDVTEERYTATGSGSPIAIGVIESGYRPEMS 180
>gi|225192946|dbj|BAH29701.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LYK+RN + +S AA+ + Y + +I
Sbjct: 113 MSGSAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 170
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 171 GWD-KEGPGLYYVD 183
>gi|219567030|dbj|BAH05033.1| proteasome subunit, beta type 8 [Oryzias dancena]
Length = 275
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L+ + +M +
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 171
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 172 ICGWD-KEGPGLYYVD 186
>gi|390190128|dbj|BAM20998.1| proteasome subunit beta type-8, partial [Polypterus senegalus]
Length = 226
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D V + +A++ ++YK+RN +++ AA+ LA Y + +I
Sbjct: 67 MSGSAADCVYWERVLAQHCRIYKLRNKEQITVSAASKLLSNMLAGY--RGMGLSIGSMIC 124
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
G D ++GP L+++D + + + G +M HR ++
Sbjct: 125 GWD-KKGPGLYYVDENGTRLSGNMFSTGSGHSYAYGVMDSGHRYDL 169
>gi|17380265|sp|Q9P992.1|PSB_METTE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|790625|gb|AAA91642.1| beta-type proteasome subunit [Methanosarcina thermophila TM-1]
Length = 210
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 22/157 (14%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSR-SPYNCNM 59
M G GD Q ++ QLYKMR ++ + L+ R+R P +
Sbjct: 52 MTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGITTLMSNFLS---RNRYYPMMVQL 108
Query: 60 LIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGI-VTLSIMGEYHRSEV---------- 108
LI G D + GP ++ +D + IE I+ G + ++ + +R +
Sbjct: 109 LIGGVD-KNGPGIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAI 167
Query: 109 ------QKRLIINVPNFKVTMVSKDGIKHLPPIKAKN 139
KR + N V +++K+ K L P + K+
Sbjct: 168 RAIHNATKRDSASGENIDVVVITKEAFKRLDPEEVKS 204
>gi|397474369|ref|XP_003808654.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Pan paniscus]
Length = 272
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY +RNG +S AA+ + +Y + +I
Sbjct: 113 MSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQY--RGMGLSMGSMIC 170
Query: 63 GHDPEEGPQLFFID 76
G D ++GP L+++D
Sbjct: 171 GWD-KKGPGLYYVD 183
>gi|219567058|dbj|BAH05047.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 275
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L + +M +
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS----KLLCNMMLGYRGMGLSMGSM 171
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 172 ICGWD-KEGPGLYYVD 186
>gi|349802169|gb|AEQ16557.1| putative proteasome ( macropain) alpha 3 [Pipa carvalhoi]
Length = 204
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 23/140 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D A+ + ++ GY+ LS R A Y L +R P+
Sbjct: 26 MAVAGLLADARSLADIAREEASNFRSNYGYDIPLKHLSDRVAMYVHAYTLYSAVR---PF 82
Query: 56 NCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIIN 115
C+ ++ ++ ++G QL+ +D +++GY G ++ + ++E++K +
Sbjct: 83 GCSFMLGSYNEDDGAQLYMVDPSG-------VSYGYWG-CSIGKAKQAAKTEIEKLQMKE 134
Query: 116 VPNFKVTMVSKDGIKHLPPI 135
M +D +K + I
Sbjct: 135 -------MTCRDAVKEVAKI 147
>gi|145592407|ref|YP_001154409.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595720|sp|A4WMZ0.1|PSB2_PYRAR RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145284175|gb|ABP51757.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
13514]
Length = 203
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+A G D A + N + Y++ + + R+ A K L+ + SR P+
Sbjct: 51 IASAGIIADMQSLARIVKINAKAYELETRKKPTVRSMA----KLLSVIMFSRRYMPFFAE 106
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
+L+ G D EEG L +D L SLIE Y G + +S++ +R ++
Sbjct: 107 VLVGGVD-EEGSHLIVMDPLGSLIEDNYAALGTGAKLAISVLDTGYREDI 155
>gi|47214803|emb|CAF89630.1| unnamed protein product [Tetraodon nigroviridis]
Length = 732
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPYN 56
AV G D A+ + ++ GY+ L+ R A Y L +R P+
Sbjct: 554 AVAGLLADARSLADVAKEEASSFRSNYGYDIPLKHLADRVAMYVHAYTLYSAVR---PFG 610
Query: 57 CNMLIAGHDPEEGPQLFFID 76
C+ ++ D ++GPQL+ +D
Sbjct: 611 CSFILGSFDKDDGPQLYMVD 630
>gi|167045028|gb|ABZ09692.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG8G15]
Length = 210
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 54 PYNCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
P+ ++L+ G+D ++GPQLF ID S+ + Y+T G V ++ + +R ++
Sbjct: 106 PFIADILLGGYD-QDGPQLFNIDMFGSVEKKSYVTTGSGSPVAYGVLEDEYRDDL 159
>gi|224473800|gb|ACN49144.1| proteasome beta 8 subunit proprotein [Oryzias dancena]
Length = 275
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + +AK +LY++RN + +S AA+ K L+ + +M +
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAAS----KLLSNMMLGYRGMGLSMGSM 171
Query: 61 IAGHDPEEGPQLFFID 76
I G D +EGP L+++D
Sbjct: 172 ICGWD-KEGPGLYYVD 186
>gi|383850393|ref|XP_003700780.1| PREDICTED: proteasome subunit beta type-6-like isoform 1 [Megachile
rotundata]
Length = 232
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G + DT ++ +A ++ LYKM G E AA R+ Y R +L+AG
Sbjct: 78 SGSAADTQAISDIVAYDLNLYKMEVGMEPLVETAANVFRELCYNY---RDSLMAGILVAG 134
Query: 64 HDPEEGPQLFFI 75
D +G Q++ I
Sbjct: 135 WDNRKGGQVYSI 146
>gi|397474367|ref|XP_003808653.1| PREDICTED: proteasome subunit beta type-8 isoform 1 [Pan paniscus]
Length = 276
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY +RNG +S AA+ + +Y + +I
Sbjct: 117 MSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQY--RGMGLSMGSMIC 174
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR 105
G D ++GP L+++D + + + G +M +R
Sbjct: 175 GWD-KKGPGLYYVDQHGTRLSGNMFSTGSGNTYAYGVMDSGYR 216
>gi|47522620|ref|NP_999100.1| proteasome subunit beta type-8 [Sus scrofa]
gi|4545092|gb|AAD22390.1|AF059493_1 proteasome subunit LMP7 [Sus scrofa]
Length = 260
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY +RNG +S AA+ + +Y + +I
Sbjct: 101 MSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMYQY--RGMGLSMGSMIC 158
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
G D ++GP L+++D + + + G +M HR ++
Sbjct: 159 GWD-KKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLS 204
>gi|58332218|ref|NP_001011257.1| proteasome (prosome, macropain) subunit, alpha type, 3 [Xenopus
(Silurana) tropicalis]
gi|56270164|gb|AAH87567.1| proteasome (prosome, macropain) subunit, alpha type, 3 [Xenopus
(Silurana) tropicalis]
gi|89270406|emb|CAJ81511.1| proteasome (prosome macropain) subunit alpha type 3 [Xenopus
(Silurana) tropicalis]
Length = 255
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 23/140 (16%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D A+ + ++ GY+ LS R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLADIAREEASNFRANYGYDIPLKHLSDRVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIIN 115
C+ ++ ++ ++G QL+ +D I++GY G + + ++E++K + +
Sbjct: 133 GCSFMLGSYNEDDGAQLYMVDPSG-------ISYGYWG-CAIGKAKQAAKTEIEKLQMKD 184
Query: 116 VPNFKVTMVSKDGIKHLPPI 135
M +D +K + I
Sbjct: 185 -------MTCRDVVKEVAKI 197
>gi|114606757|ref|XP_001167272.1| PREDICTED: proteasome subunit beta type-8 isoform 3 [Pan
troglodytes]
gi|410220158|gb|JAA07298.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410257298|gb|JAA16616.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410287540|gb|JAA22370.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
gi|410332767|gb|JAA35330.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Pan troglodytes]
Length = 276
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY +RNG +S AA+ + +Y + +I
Sbjct: 117 MSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQY--RGMGLSMGSMIC 174
Query: 63 GHDPEEGPQLFFID 76
G D ++GP L+++D
Sbjct: 175 GWD-KKGPGLYYVD 187
>gi|147225186|emb|CAN13318.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Sus scrofa]
Length = 208
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY +RNG +S AA+ + +Y + +I
Sbjct: 49 MSGSAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMYQY--RGMGLSMGSMIC 106
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
G D ++GP L+++D + + + G +M HR ++
Sbjct: 107 GWD-KKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLS 152
>gi|410721909|ref|ZP_11361231.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
gi|410598027|gb|EKQ52619.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
Length = 209
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS-PYNCNMLI 61
+ G D ++I + L+++RNG ++ AAA T L SR P+ L+
Sbjct: 54 IAGAVSDAQSLMKYIRAEVALFRLRNGKRINVEAAATLTSNILHS---SRGYPFYVQTLL 110
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHG 90
G D ++GP L+ +D +I+ I+ G
Sbjct: 111 GGVD-DKGPALYSLDPTGGVIKDLMISTG 138
>gi|344298836|ref|XP_003421097.1| PREDICTED: proteasome subunit beta type-8-like [Loxodonta africana]
Length = 276
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY +RNG +S AA+ + +Y + +I
Sbjct: 117 MSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQY--RGMGLSMGSMIC 174
Query: 63 GHDPEEGPQLFFID 76
G D ++GP L+++D
Sbjct: 175 GWD-KKGPGLYYVD 187
>gi|358373086|dbj|GAA89686.1| proteasome component Pre3 [Aspergillus kawachii IFO 4308]
Length = 232
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G + DT A+ ++ ++ +Y + N S + AA ++ E ++ + ++IAG
Sbjct: 76 SGSAADTQAVADIVSYHLNMYAITNNEAPSTQVAASLFQELCYE---NKDMLSAGIIIAG 132
Query: 64 HDPEEGPQLFFIDYLASLIEIPY 86
+DP+ G Q++ I SL + PY
Sbjct: 133 YDPKHGGQVYSIPLGGSLHKQPY 155
>gi|410931040|ref|XP_003978904.1| PREDICTED: proteasome subunit beta type-8-like [Takifugu rubripes]
Length = 275
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D + + +AK +LY++RN + +S AA+ K LA + ++ +
Sbjct: 116 MSGSAADCMYWERLLAKECRLYRLRNNHRISVAAAS----KLLANMMLGYRGMGLSVGSM 171
Query: 61 IAGHDPEEGPQLFFID 76
I G D ++GP L+++D
Sbjct: 172 ICGWD-KQGPGLYYVD 186
>gi|408382617|ref|ZP_11180160.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
gi|407814693|gb|EKF85317.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
Length = 208
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS-PYNCNMLI 61
+ G D ++I + L+++RNG ++ AAA T L SR P+ L+
Sbjct: 54 IAGAVSDAQSLMKYIRAEVALFRLRNGKRINVEAAATLTSNILHS---SRGYPFYVQTLL 110
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHG 90
G D ++GP L+ +D +I+ I+ G
Sbjct: 111 GGVD-DKGPALYSLDPTGGVIKDLVISTG 138
>gi|126460611|ref|YP_001056889.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595828|sp|A3MXQ6.1|PSB2_PYRCJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126250332|gb|ABO09423.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
11548]
Length = 203
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+A G D A+ + N + Y++ E+ + + + K L+ + SR P+
Sbjct: 51 IASAGIIADMQTLAKILKLNAKAYEL----EMKRKPSVHAMAKLLSVVMFSRRFMPFFAE 106
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR 105
+L+ G D +EGP L +D L SLIE Y G + ++I+ ++
Sbjct: 107 VLVGGID-DEGPHLIVMDPLGSLIEDNYAALGTGAKLAIAIIDASYK 152
>gi|148694874|gb|EDL26821.1| proteasome (prosome, macropain) subunit, beta type 7, isoform CRA_a
[Mus musculus]
Length = 266
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 22/171 (12%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G PR + L + L Y L+ G
Sbjct: 90 GTAADTDMTTQLISSNLELHSLTTGRL--PRVVT--ANRMLKQMLFRYQGYIGAALVLGG 145
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----KRLIINV---- 116
GP L+ I S ++PY+T G + +++ + R +++ K+L+
Sbjct: 146 VDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAG 205
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKNIPEENKGIPETEQYAAIPVA 159
N + ++SK + L P N ++ + T+ A+P++
Sbjct: 206 IFNDLGSGSNIDLCVISKSKLDFLRPFSVPN--KKGTSLAGTDVRKALPLS 254
>gi|402226084|gb|EJU06144.1| N-terminal nucleophile aminohydrolase [Dacryopinax sp. DJM-731 SS1]
Length = 261
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 24 YKMRNGYELSPRAAAYYTRK--QLAEYLRSRSPYNCNMLIAGHDPEEGPQLFFID 76
++ +NGYE++P A A Q+ + P M++ G DPE GPQ F +D
Sbjct: 98 FRYKNGYEITPDALARRIANINQVYTQRAAMRPLGIAMILIGIDPEFGPQCFKLD 152
>gi|260830465|ref|XP_002610181.1| hypothetical protein BRAFLDRAFT_264234 [Branchiostoma floridae]
gi|229295545|gb|EEN66191.1| hypothetical protein BRAFLDRAFT_264234 [Branchiostoma floridae]
Length = 255
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D Q +E ++ G + L+ R A Y L ++R P+
Sbjct: 76 MAVAGLLADARQISEIARDEASNFRYNYGGDIPCKNLADRVAMYMHAYTLYSHVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C++++ ++ ++GPQL+ +D
Sbjct: 133 GCSVMLGSYNKDDGPQLYMMD 153
>gi|219567022|dbj|BAH05029.1| proteasome subunit, beta type 8, partial [Oryzias sarasinorum]
Length = 275
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNMMLGY--RGMGLSIGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|327284932|ref|XP_003227189.1| PREDICTED: proteasome subunit alpha type-3-like [Anolis
carolinensis]
Length = 255
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGY-----ELSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D A+ + ++ GY L+ R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLADIAREEASNFRSNYGYNIPLKHLADRVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ +D ++G QL+ ID
Sbjct: 133 GCSFMLGSYDDDDGAQLYMID 153
>gi|157909841|ref|NP_001039029.2| proteasome subunit beta type-7 [Danio rerio]
gi|141796175|gb|AAI35051.1| Proteasome (prosome, macropain) subunit, beta type, 7 [Danio rerio]
gi|157888630|emb|CAE30392.2| proteasome (prosome, macropain) subunit, beta type, 7 [Danio rerio]
gi|190340004|gb|AAI63781.1| Proteasome (prosome, macropain) subunit, beta type, 7 [Danio rerio]
Length = 277
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 20/146 (13%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G PR A + L + L Y L+ G
Sbjct: 90 GTAADTEMTTQIISSNLELHSLSTGRL--PRVAT--ANRMLKQMLFRYQGYIGAALVLGG 145
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----KRLIINV---- 116
GP L+ I S ++PY+T G + +++ + +R +++ K L+ +
Sbjct: 146 VDCTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYRPDMEEEDAKSLVRDAIAAG 205
Query: 117 --------PNFKVTMVSKDGIKHLPP 134
N V +++K + +L P
Sbjct: 206 IFNDLGSGSNIDVCVITKGKVDYLRP 231
>gi|242247301|ref|NP_001156078.1| proteasome subunit beta type 7,10-like [Acyrthosiphon pisum]
gi|239789989|dbj|BAH71585.1| ACYPI001304 [Acyrthosiphon pisum]
Length = 270
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT+Q ++ N+ L + E+ P A + + L +YL Y LI G
Sbjct: 86 GTAADTMQVTRMVSANVSLQAFKFPEEMVPVA---FAARSLRQYLFKYMGYVSAALILGG 142
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLS 98
G L+ I S+ ++PYI+ G + +S
Sbjct: 143 VDNSGTHLYSIYPHGSIDKLPYISMGSGSMAAIS 176
>gi|146304800|ref|YP_001192116.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
5348]
gi|302595852|sp|A4YIE0.1|PSB1_METS5 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145703050|gb|ABP96192.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Metallosphaera sedula DSM
5348]
Length = 217
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-LSPRAAAYYTRKQLAEYLRSRSPYNCNM 59
M G D +QF KNI Y + +G ++ ++ A Y L++ PY +
Sbjct: 64 MTTAGSVAD-LQFIYNYMKNIYHYNLISGNRPVTVKSLATYLTNILSQ--NKYFPYLVQI 120
Query: 60 LIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIM 100
L+ G+D + P+LF +DYL + E Y+ G V + ++
Sbjct: 121 LMGGYDTQ--PRLFNLDYLGDMTEETYVATGSGSPVAMGVL 159
>gi|432888936|ref|XP_004075096.1| PREDICTED: proteasome subunit beta type-7-like isoform 1 [Oryzias
latipes]
Length = 277
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G + PR A + L + L Y L+ G
Sbjct: 90 GTAADTEMTTQIISSNLELHALSTGRQ--PRVAT--ANRMLKQMLFRYQGYIGAALVLGG 145
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQK 110
GP L+ I S ++PY+T G + +++ + +++ +++
Sbjct: 146 VDCNGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYKTGMEE 191
>gi|428186502|gb|EKX55352.1| 20S proteasome subunit alpha type 6 [Guillardia theta CCMP2712]
Length = 252
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLR--SRSPYNCNMLI 61
TG D + + + ++ + GY++ P A Y + PY M++
Sbjct: 86 TGHQADARAQIQRVRQEAAQFRYKYGYDMPPEVLAKRVADMNQVYTQHAGMRPYGVTMML 145
Query: 62 AGHDPEEGPQLFFID 76
G D E+GPQLF D
Sbjct: 146 CGMDDEKGPQLFMCD 160
>gi|389860550|ref|YP_006362789.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525453|gb|AFK50651.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 205
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 23/154 (14%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
+TGD + + AKN Y++ +G E+ R+ A L Y P ++
Sbjct: 56 GLTGDMNFLYRVLKTEAKN---YELEHGREIKTRSLAKLLSIILYSY--KLFPMLTEAVV 110
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV------------- 108
G D E P LF +D + SL+E Y G + LSI+ + +R ++
Sbjct: 111 GGFD--EAPSLFVLDAVGSLLEERYTALGSGSQLALSIIEQSYREDMPLEEAKNLAVKAV 168
Query: 109 ---QKRLIINVPNFKVTMVSKDGIKHLPPIKAKN 139
+R +++ V +++++GIK + A++
Sbjct: 169 LAAIERDVLSGDGVDVLVITREGIKSEEHLLARS 202
>gi|5833465|gb|AAD53521.1|AF155581_1 proteasome subunit beta 7 [Danio rerio]
Length = 275
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 20/146 (13%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G PR A + L + L Y L+ G
Sbjct: 88 GTAADTEMTTQIISSNLELHSLSTGRL--PRVAT--ANRMLKQMLFRYQGYIGAALVLGG 143
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----KRLIINV---- 116
GP L+ I S ++PY+T G + +++ + +R +++ K L+ +
Sbjct: 144 VDCTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYRPDMEEEDAKSLVRDAIAAG 203
Query: 117 --------PNFKVTMVSKDGIKHLPP 134
N V +++K + +L P
Sbjct: 204 IFNDLGSGSNIDVCVITKGKVDYLRP 229
>gi|45383366|ref|NP_989728.1| proteasome subunit beta type-7 [Gallus gallus]
gi|30268674|dbj|BAC76008.1| proteasome subunit Z [Gallus gallus]
Length = 277
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 68/164 (41%), Gaps = 20/164 (12%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + IA N++L+ + G PR + L + L Y L+ G
Sbjct: 90 GTAADTEMTTQLIASNLELHALSTGR--LPRVVT--ANRMLKQMLFRYQGYIGAALVLGG 145
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----KRLIINV---- 116
GP L+ I S ++PY+T G + ++I + ++ +++ K+L+ +
Sbjct: 146 VDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAIFEDKYKPDMEEEEAKQLVRDAIAAG 205
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKNIPEENKGIPETEQ 152
N + ++SK+ + + P N E G + E+
Sbjct: 206 IYNDLGSGSNIDICVISKNKLDFIRPYDVANRKGERYGRYKCER 249
>gi|219567062|dbj|BAH05049.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 238
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 79 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 136
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 137 GWD-KEGPGLYYVD 149
>gi|58265056|ref|XP_569684.1| proteasome subunit, beta type, 7 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57225916|gb|AAW42377.1| proteasome subunit, beta type, 7, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 303
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYL-RSRSPYNCNMLIAG 63
G + DT I+ N++L+ + G + A L +YL R + ++++ G
Sbjct: 91 GTAADTEFVTNLISSNLELHALSQGRQ----ARIVTAMTMLKQYLFRYQGHVGAHLVLGG 146
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV------- 116
D GP LF + S ++PY+T G + +++ + + ++ I++
Sbjct: 147 VD-STGPHLFTVHAHGSTDKLPYVTMGSGSLAAMAVFESSFKEHMTRQEAIDLVARAIRS 205
Query: 117 ---------PNFKVTMVSKDGIKHL 132
N V +++K+G + L
Sbjct: 206 GVFNDLGSGSNVDVAVITKNGTEML 230
>gi|225703298|gb|ACO07495.1| Proteasome subunit beta type 8 precursor [Oncorhynchus mykiss]
Length = 276
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D V + +AK ++YK+RN +S AA+ K LA + + +M +
Sbjct: 117 MSGSAADCVYWERVLAKECRIYKLRNKERISVSAAS----KLLANMVVNYRGMGLSMGTM 172
Query: 61 IAGHDPEEGPQLFFID 76
I G D ++GP L+++D
Sbjct: 173 ICGWD-KKGPGLYYVD 187
>gi|238482157|ref|XP_002372317.1| proteasome component Pre3, putative [Aspergillus flavus NRRL3357]
gi|317139101|ref|XP_001817267.2| proteasome component PRE3 [Aspergillus oryzae RIB40]
gi|220700367|gb|EED56705.1| proteasome component Pre3, putative [Aspergillus flavus NRRL3357]
gi|391864608|gb|EIT73903.1| 20S proteasome, regulatory subunit beta type PSMB6/PSMB9/PRE3
[Aspergillus oryzae 3.042]
Length = 232
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G + DT A+ ++ ++ +Y + N S + AA ++ E ++ + ++IAG
Sbjct: 76 SGSAADTQAVADIVSYHLNMYSITNNEAPSTQVAASLFQELCYE---NKDMLSAGIIIAG 132
Query: 64 HDPEEGPQLFFIDYLASLIEIPY 86
+DP G Q++ I SL + PY
Sbjct: 133 YDPRHGGQVYSIPLGGSLHKQPY 155
>gi|83765122|dbj|BAE55265.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 227
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G + DT A+ ++ ++ +Y + N S + AA ++ E ++ + ++IAG
Sbjct: 71 SGSAADTQAVADIVSYHLNMYSITNNEAPSTQVAASLFQELCYE---NKDMLSAGIIIAG 127
Query: 64 HDPEEGPQLFFIDYLASLIEIPY 86
+DP G Q++ I SL + PY
Sbjct: 128 YDPRHGGQVYSIPLGGSLHKQPY 150
>gi|259089301|ref|NP_001158688.1| Proteasome subunit beta type 8 [Oncorhynchus mykiss]
gi|225705888|gb|ACO08790.1| Proteasome subunit beta type 8 precursor [Oncorhynchus mykiss]
Length = 276
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNM--L 60
++G + D V + +AK ++YK+RN +S AA+ K LA + + +M +
Sbjct: 117 MSGSAADCVYWERVLAKECRIYKLRNKERISVSAAS----KLLANMVVNYRGMGLSMGTM 172
Query: 61 IAGHDPEEGPQLFFID 76
I G D ++GP L+++D
Sbjct: 173 ICGWD-KKGPGLYYVD 187
>gi|379005617|ref|YP_005261289.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
gi|375161070|gb|AFA40682.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
Length = 203
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRS--PYNCN 58
+A G D A + N + Y++ + + R+ A K L+ + SR P+
Sbjct: 51 IASAGIIADMQSLARIVKINAKAYELETRKKPTVRSMA----KLLSVIMFSRRYMPFFAE 106
Query: 59 MLIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
+L+ G D EEG L +D L SLIE Y G + +S++ +R ++
Sbjct: 107 VLVGGVD-EEGNHLIVMDPLGSLIEDNYAALGTGAKLAISVLDTGYREDI 155
>gi|339461817|gb|AEJ79817.1| squalene epoxidase [Eleutherococcus senticosus]
Length = 554
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 12/126 (9%)
Query: 19 KNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFFIDYL 78
K +Q YK ++G ELS A LR CN P+ F+ +
Sbjct: 221 KGVQ-YKTKDGQELSAFAPLTIVCDGCFSNLRRSL---CN-------PKVEVPSCFVGLI 269
Query: 79 ASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVPNFKVTMVSK-DGIKHLPPIKA 137
I++PYI HG+ + S + Y S + R +++VP KV +S D +L + A
Sbjct: 270 LEDIDLPYINHGHVILADPSPILFYKISSTEIRCLVDVPGQKVPSISNGDLANYLKTVVA 329
Query: 138 KNIPEE 143
+P+E
Sbjct: 330 PQVPKE 335
>gi|339246829|ref|XP_003375048.1| proteasome subunit beta type-1 [Trichinella spiralis]
gi|316971688|gb|EFV55434.1| proteasome subunit beta type-1 [Trichinella spiralis]
Length = 297
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M TG GD +Q + + IQ Y + AAA + L Y R PY +
Sbjct: 136 MTGTGFQGDMIQLVKVLRTRIQQYLFTFNEYMDIHAAAQLLSRTL--YFRRFFPYYVGAI 193
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHG 90
I G D + L+ D + ++ E+PY G
Sbjct: 194 IGGIDRDGRGVLYSYDPVGTIEELPYSAQG 223
>gi|147905680|ref|NP_001080243.1| proteasome (prosome, macropain) subunit, alpha type, 3 [Xenopus
laevis]
gi|27371303|gb|AAH41518.1| Psma3-prov protein [Xenopus laevis]
Length = 255
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYE-----LSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D A+ + ++ GY+ LS R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLADIAREEASNFRANYGYDIPLKHLSDRVAMYAHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ ++ ++G QL+ +D
Sbjct: 133 GCSFMLGSYNEDDGAQLYMVD 153
>gi|326930546|ref|XP_003211407.1| PREDICTED: proteasome subunit beta type-7-like [Meleagris
gallopavo]
Length = 241
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 68/164 (41%), Gaps = 20/164 (12%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + IA N++L+ + G PR + L + L Y L+ G
Sbjct: 54 GTAADTEMTTQLIASNLELHALSTGR--LPRVVT--ANRMLKQMLFRYQGYIGAALVLGG 109
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----KRLIINV---- 116
GP L+ I S ++PY+T G + +++ + ++ +++ K+L+ +
Sbjct: 110 VDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKYKPDMEEEEAKQLVRDAIAAG 169
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKNIPEENKGIPETEQ 152
N + ++SK+ + + P N E G + E+
Sbjct: 170 IYNDLGSGSNIDICVISKNKLDFIRPYDVANRKGERYGRYKCER 213
>gi|323449160|gb|EGB05050.1| hypothetical protein AURANDRAFT_69937 [Aureococcus anophagefferens]
Length = 279
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + E IA ++L ++ G + AA ++ L +Y + +++ G
Sbjct: 93 GTAADTEKTTELIASQLELLRLSTGTQSRVVAAVTLLKRMLFKY---QGHIGAALVLGGV 149
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSI 99
D GP L+ I S ++PY+T G + +S+
Sbjct: 150 DCT-GPGLYQIYPHGSTSKLPYVTMGSGSLAAMSV 183
>gi|296242989|ref|YP_003650476.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095573|gb|ADG91524.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 202
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G GD + + Y++++G E+ R A L Y +P +++ G+
Sbjct: 52 GLMGDVNILKRMLEMEAKYYELQHGREIRVRGLAKMLSVILYSY--KLAPMLTEIVVGGY 109
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHG 90
D + GPQL+ +D + SLIE Y G
Sbjct: 110 D-DNGPQLYILDPVGSLIEEKYAALG 134
>gi|147906595|ref|NP_001087535.1| proteasome subunit beta type-7 [Xenopus laevis]
gi|51261485|gb|AAH80076.1| MGC84123 protein [Xenopus laevis]
Length = 277
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 20/151 (13%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G PR A + L + L Y L+ G
Sbjct: 90 GTAADTEMTTQMISSNMELHSLSTGRL--PRVAT--ANRMLKQMLFRYQGYIGAALVLGG 145
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----KRLIINV---- 116
GP L+ I S ++PY+T G + +++ + ++ +++ K+L+ N
Sbjct: 146 VDCSGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYKPDMEEEEAKQLVRNAIAAG 205
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKN 139
N + +++K+ + ++ P N
Sbjct: 206 IFNDLGSGSNIDLCVITKNKVDYIRPHDVAN 236
>gi|428673136|gb|EKX74049.1| proteasome subunit beta 7, putative [Babesia equi]
Length = 271
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 61/147 (41%), Gaps = 20/147 (13%)
Query: 2 AVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLI 61
A G + D ++A NI+L+++ + + +L +Y + C ++I
Sbjct: 84 AGAGVAADLEHTTLWLANNIELHRLNTKKKPMVQMCVSMLVHELYKY---QGYKQCALII 140
Query: 62 AGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRS----EVQKRLIINV- 116
GHD GP LF + S +P+ T G + +S++ E + E +L +
Sbjct: 141 GGHDTS-GPHLFSVSPHGSSDSLPFCTMGSGSLNAMSVLEEGYFDGMSIEDATKLAVKAI 199
Query: 117 -----------PNFKVTMVSKDGIKHL 132
N V +++KDG +H+
Sbjct: 200 SAGITNDLGSGGNVDVCVITKDGAEHI 226
>gi|332823719|ref|XP_003311252.1| PREDICTED: proteasome subunit beta type-8 [Pan troglodytes]
Length = 160
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY +RNG +S AA+ + +Y + +I
Sbjct: 1 MSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQY--RGMGLSMGSMIC 58
Query: 63 GHDPEEGPQLFFID 76
G D ++GP L+++D
Sbjct: 59 GWD-KKGPGLYYVD 71
>gi|432888938|ref|XP_004075097.1| PREDICTED: proteasome subunit beta type-7-like isoform 2 [Oryzias
latipes]
Length = 286
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G + PR A + L + L Y L+ G
Sbjct: 90 GTAADTEMTTQIISSNLELHALSTGRQ--PRVAT--ANRMLKQMLFRYQGYIGAALVLGG 145
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQK 110
GP L+ I S ++PY+T G + +++ + +++ +++
Sbjct: 146 VDCNGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYKTGMEE 191
>gi|226372034|gb|ACO51642.1| Proteasome subunit beta type-7 precursor [Rana catesbeiana]
Length = 277
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G PR A + L + L Y L+ G
Sbjct: 90 GTAADTEMTTQMISSNVELHSLSTGR--LPRVAT--ANRMLKQMLFRYQGYIGAALVLGG 145
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQK 110
GP L+ I S +PY+T G + +++ + +R ++++
Sbjct: 146 VDCSGPHLYSIYPHGSTDRLPYVTMGSGSLAAMAVFEDRYRPDMEE 191
>gi|326368273|ref|NP_001191916.1| proteasome subunit beta type-7 [Acyrthosiphon pisum]
Length = 270
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT+Q ++ N+ L + E+ P A + + L +YL Y LI G
Sbjct: 86 GTAADTMQVTRMVSANVSLQAFKFPDEMVPVA---FAARSLRQYLFKYMGYVSAALILGG 142
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLS 98
G L+ I S+ ++PYI+ G + +S
Sbjct: 143 IDNSGAHLYSIYPHGSIDKLPYISMGSGSMAAIS 176
>gi|339461819|gb|AEJ79818.1| squalene epoxidase [Eleutherococcus senticosus]
gi|339461821|gb|AEJ79819.1| squalene epoxidase [Eleutherococcus senticosus]
Length = 554
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 12/126 (9%)
Query: 19 KNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFFIDYL 78
K +Q YK ++G ELS A LR CN P+ F+ +
Sbjct: 221 KGVQ-YKTKDGQELSAFAPLTIVCDGCFSNLRRSL---CN-------PKVEVPSCFVGLI 269
Query: 79 ASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVPNFKVTMVSK-DGIKHLPPIKA 137
I++PYI HG+ + S + Y S + R +++VP KV +S D +L + A
Sbjct: 270 LEDIDLPYINHGHVILADPSPILFYKISSTEIRCLVDVPGQKVPSISNGDLANYLKTVVA 329
Query: 138 KNIPEE 143
+P+E
Sbjct: 330 PQVPKE 335
>gi|209733376|gb|ACI67557.1| Proteasome subunit beta type-7 precursor [Salmo salar]
Length = 288
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAA-AYYTRKQLAEYLRSRSPYNCNMLIAG 63
G + DT + I+ N++L+ + PR A A KQ+ R + +++ G
Sbjct: 90 GTAADTEMTTQIISSNLELHSLST--SRLPRVAIANRMLKQM--LFRYQGHIGAALVLGG 145
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV----QKRLIINV--- 116
D GP L+ I S ++PY+T G + +++ + ++ ++ KRL+ +
Sbjct: 146 VDCN-GPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYKQDMGEEDAKRLVRDAIAA 204
Query: 117 ---------PNFKVTMVSKDGIKHLPPIKAKNIPEENKGIPETEQYAAIP 157
N + +++K + +L P N KG+ +Y A+P
Sbjct: 205 GIFNDLGSGSNIDLCVITKGRVDYLRPHDMAN----KKGVRCVYEYEALP 250
>gi|219567056|dbj|BAH05046.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
gi|219567060|dbj|BAH05048.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 275
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|390190132|dbj|BAM21000.1| proteasome subunit beta type-8, partial [Polypterus senegalus]
Length = 226
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LYK+RN +S AA+ + +Y + +I
Sbjct: 67 MSGSAADCQYWERLLAKECRLYKLRNKERISVSAASKLLSNMMCQY--RGMGLSMGSMIC 124
Query: 63 GHDPEEGPQLFFID 76
G D ++GP L+++D
Sbjct: 125 GWD-KKGPGLYYVD 137
>gi|289740977|gb|ADD19236.1| 20S proteasome regulatory subunit beta type PSMB5/PSMB8/PRE2
[Glossina morsitans morsitans]
Length = 279
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G + D V + +AK +L+++RN +S AA+ EY + M++A
Sbjct: 117 LAGGAADCVYWDRVLAKECRLHELRNKERISVAAASKIMANIAHEY--KGMGLSMGMMLA 174
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
G+D + GP L+++D AS + G + ++ +R +++
Sbjct: 175 GYD-KRGPGLYYVDSDASRSPGNVFSVGSGSVYAFGVLDSGYRWDLK 220
>gi|330791343|ref|XP_003283753.1| proteasome subunit beta type 7 [Dictyostelium purpureum]
gi|325086376|gb|EGC39767.1| proteasome subunit beta type 7 [Dictyostelium purpureum]
Length = 274
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT I+ ++L+K+ G + A ++ L +Y S LI G
Sbjct: 81 GTAADTENATALISSKLKLHKLSTGRQTRVTTALTMLKQMLFKYQGHVSA----ALILGG 136
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV 116
GP L I S ++PY+T G + +++ ++S + K+ I++
Sbjct: 137 IDINGPSLHTIYPHGSTDQLPYVTMGSGSLAAMAVFEAKYKSNMNKQEAIDL 188
>gi|229366194|gb|ACQ58077.1| Proteasome subunit beta type-7 precursor [Anoplopoma fimbria]
Length = 277
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G PR A + L + L Y L+ G
Sbjct: 90 GTAADTEMTTQIISSNLELHALSTGR--LPRLAT--ANRMLKQMLFRYQGYISAALVLGG 145
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----KRLI 113
GP L+ I S ++PY+T G + +++ + ++ +++ KRL+
Sbjct: 146 VDCNGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYKPDMEEEEAKRLV 198
>gi|219567016|dbj|BAH05026.1| proteasome subunit, beta type 8 [Oryzias luzonensis]
gi|224473834|gb|ACN49173.1| proteasome associated anitgen processing [Oryzias luzonensis]
Length = 275
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|345488887|ref|XP_003426004.1| PREDICTED: proteasome subunit beta type-5-like, partial [Nasonia
vitripennis]
Length = 225
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G + D V + +AK ++Y++RN +S AA+ + Y + M+IA
Sbjct: 117 LAGGAADCVYWDRVLAKQCRMYELRNRSRISIAAASKLMSNMVYNY--KGMGLSIGMMIA 174
Query: 63 GHDPEEGPQLFFID 76
G D + GP L+++D
Sbjct: 175 GWD-KRGPGLYYVD 187
>gi|110668567|ref|YP_658378.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|385804032|ref|YP_005840432.1| proteasome subunit beta [Haloquadratum walsbyi C23]
gi|121689658|sp|Q18GX3.1|PSB_HALWD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|109626314|emb|CAJ52772.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|148508113|gb|ABQ75907.1| proteasome beta subunit [uncultured haloarchaeon]
gi|339729524|emb|CCC40787.1| proteasome beta subunit [Haloquadratum walsbyi C23]
Length = 243
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 17 IAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFFID 76
I ++LY+ R G ++S A + L +LRS + ++ G D ++GP ++ ID
Sbjct: 108 IRAEVRLYEARRGEDMSMEALSTL----LGNFLRSGGFFIVQPILGGVD-DDGPHIYSID 162
Query: 77 YLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----------------KRLIINVPNFK 120
S+IE Y G L ++ + + ++ +R + +
Sbjct: 163 PAGSIIEEEYTVTGSGSQYALGVLEQQYNEDLSIEEAKTVAARSIESAVERDLASGNGIN 222
Query: 121 VTMVSKDGIK 130
V +V++DG++
Sbjct: 223 VCVVTEDGVE 232
>gi|225193068|dbj|BAH29675.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|296785033|ref|NP_001171881.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|18157533|dbj|BAB83848.1| PSMB8-A [Oryzias latipes]
gi|295901497|dbj|BAJ07261.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|295901536|dbj|BAJ07285.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|295901538|dbj|BAJ07286.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 275
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|219567012|dbj|BAH05024.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 275
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|198417706|ref|XP_002126641.1| PREDICTED: similar to proteasome subunit Y [Ciona intestinalis]
Length = 217
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G + DT A+ +A N++L + G S + AA R+ +Y R +++AG
Sbjct: 63 SGSAADTQAIADAVAANVELDGIVMGGLPSVKKAAEIFRQYCYDY---RDNLTAGIIVAG 119
Query: 64 HDPEEGPQLFFI 75
DP++G Q++ I
Sbjct: 120 WDPKQGGQVYTI 131
>gi|225193041|dbj|BAH29657.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|225192969|dbj|BAH29689.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192972|dbj|BAH29687.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192975|dbj|BAH29685.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192996|dbj|BAH29627.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193026|dbj|BAH29647.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193035|dbj|BAH29653.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193044|dbj|BAH29659.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193047|dbj|BAH29661.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193062|dbj|BAH29671.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|225193038|dbj|BAH29655.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|225193014|dbj|BAH29639.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|225192955|dbj|BAH29697.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|242247555|ref|NP_001156106.1| proteasome subunit alpha type-3-like [Acyrthosiphon pisum]
gi|239789747|dbj|BAH71476.1| ACYPI002276 [Acyrthosiphon pisum]
Length = 253
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 32 LSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFFID 76
L+ R + Y L +R P+ C ++I +DP++GPQ++ ID
Sbjct: 112 LNERVSMYIHAHTLYSAIR---PFGCAVIIGSYDPKDGPQMYMID 153
>gi|225193023|dbj|BAH29645.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193032|dbj|BAH29651.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193074|dbj|BAH29679.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|225192949|dbj|BAH29699.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|332017285|gb|EGI58053.1| Proteasome subunit beta type-7 [Acromyrmex echinatior]
Length = 111
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT E IA ++L+++ G + P A KQ+ R + +++ G
Sbjct: 7 GTAADTEMTTEMIASQLELHRLNTG-RVVPVCTANTLIKQM--LFRYQGHIGAALILGGF 63
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
D + GPQL+ I S ++ Y T G + +S++ +S++
Sbjct: 64 DLD-GPQLYCIYPHGSTEKLKYTTMGSGSLAAMSVLESTWKSDMS 107
>gi|225192981|dbj|BAH29681.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|225192987|dbj|BAH29621.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193008|dbj|BAH29635.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 251
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 115 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 172
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 173 GWD-KEGPGLYYVD 185
>gi|225192993|dbj|BAH29625.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
++G + D + +AK +LY++RN + +S AA+ + Y + +I
Sbjct: 116 MSGSAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGY--RGMGLSVGSMIC 173
Query: 63 GHDPEEGPQLFFID 76
G D +EGP L+++D
Sbjct: 174 GWD-KEGPGLYYVD 186
>gi|225712736|gb|ACO12214.1| Proteasome subunit beta type-6 precursor [Lepeophtheirus salmonis]
gi|225712738|gb|ACO12215.1| Proteasome subunit beta type-6 precursor [Lepeophtheirus salmonis]
gi|290462661|gb|ADD24378.1| Proteasome subunit beta type-6 [Lepeophtheirus salmonis]
gi|290561791|gb|ADD38293.1| Proteasome subunit beta type-6 [Lepeophtheirus salmonis]
Length = 227
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G + DT A+ + N+ +Y + G AY + EY R +LI G
Sbjct: 75 SGSAADTQAIAKAVRYNLDMYNVMMGETAPVETVAYMFKSICYEY---RDSLTAGILIGG 131
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQK 110
D +G Q++ I + PY + G + + M ++ ++ K
Sbjct: 132 WDKIKGGQVYSIPLGGMCVRQPYTSGGSGSVYLHAFMSANYKKDMSK 178
>gi|15920692|ref|NP_376361.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
gi|74574726|sp|Q975D1.1|PSB2_SULTO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|15621475|dbj|BAB65470.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
Length = 207
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYE-LSPRAAAYYTRKQLA--EYLRSRSPYNCNML 60
T S +QF + KNI Y + G ++ +A A Y L+ +YL PY +L
Sbjct: 58 TAGSVADLQFIYDLLKNIYHYNLITGMRPITIKALATYLANMLSFSKYL----PYIVQIL 113
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEV 108
I G D E P+L+ +DY+ + E Y G + + ++ + +R ++
Sbjct: 114 IGGVD--EQPRLYNLDYVGDITEEDYTATGSGSVEAIGVIEDEYRPDM 159
>gi|350638962|gb|EHA27317.1| hypothetical protein ASPNIDRAFT_44752 [Aspergillus niger ATCC 1015]
Length = 227
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G + DT A+ ++ ++ +Y + N S + AA ++ E ++ + ++IAG
Sbjct: 71 SGSAADTQAVADIVSYHLNMYSITNNEAPSTQVAASLFQELCYE---NKDMLSAGIIIAG 127
Query: 64 HDPEEGPQLFFIDYLASLIEIPY 86
+DP+ G Q++ I SL + P+
Sbjct: 128 YDPKHGGQVYSIPLGGSLHKQPF 150
>gi|354499160|ref|XP_003511679.1| PREDICTED: proteasome subunit alpha type-3-like [Cricetulus
griseus]
Length = 255
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGY-----ELSPRAAAYYTRKQLAEYLRSRSPY 55
MAV G D A+ + ++ GY L+ R A Y L +R P+
Sbjct: 76 MAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVR---PF 132
Query: 56 NCNMLIAGHDPEEGPQLFFID 76
C+ ++ + +GPQL+ ID
Sbjct: 133 GCSFMLGSYSTNDGPQLYMID 153
>gi|317034265|ref|XP_001396260.2| proteasome component PRE3 [Aspergillus niger CBS 513.88]
Length = 232
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G + DT A+ ++ ++ +Y + N S + AA ++ E ++ + ++IAG
Sbjct: 76 SGSAADTQAVADIVSYHLNMYSITNNEAPSTQVAASLFQELCYE---NKDMLSAGIIIAG 132
Query: 64 HDPEEGPQLFFIDYLASLIEIPY 86
+DP+ G Q++ I SL + P+
Sbjct: 133 YDPKHGGQVYSIPLGGSLHKQPF 155
>gi|224073935|ref|XP_002191642.1| PREDICTED: proteasome subunit beta type-7 [Taeniopygia guttata]
Length = 277
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G PR + L + L Y L+ G
Sbjct: 90 GTAADTEMTTQLISSNLELHSLSTGR--LPRVVT--ANRMLKQMLFRYQGYIGAALVLGG 145
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----KRLIINV---- 116
GP L+ I S ++PY+T G + +++ + ++ +++ K+L+ +
Sbjct: 146 VDVTGPHLYSIHPHGSTDKLPYVTMGSGSLAAMAVFEDKYKPDMEEEEAKQLVRDAIAAG 205
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKN 139
N + ++SK + L P N
Sbjct: 206 IYNDLGSGSNIDICVISKSKLDFLRPYDVAN 236
>gi|115918161|ref|XP_793038.2| PREDICTED: proteasome subunit beta type-7-like [Strongylocentrotus
purpuratus]
Length = 273
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+++ G E + L ++L + L+ G
Sbjct: 86 GTAADTEMTTQMISSNLELHRLSTGRE----GRVVTANRMLKQFLFRYQGHIGAALVLGG 141
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQK 110
GP L+ I S ++P+ T G + +S+ + R ++++
Sbjct: 142 VDSAGPHLYSIYPHGSTNKLPFCTMGSGSLAAMSVFEDRFRPDMEE 187
>gi|312075453|ref|XP_003140423.1| proteasome A-type and B-type family protein [Loa loa]
gi|307764412|gb|EFO23646.1| proteasome A-type and B-type family protein [Loa loa]
Length = 277
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G + D + +AK LY++R E++ AA+ Y + L Y + +IA
Sbjct: 107 MAGGAADCQFWTRIVAKYCTLYELREKTEITVAAASKYFQNVLYSY--RNHGLSVGSMIA 164
Query: 63 GHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHR 105
G+D + GP +F +D +++ + G + I+ +++
Sbjct: 165 GYD-KRGPAIFKVDSEGQRVQLRLCSIGSGSLSAYGILDNFYQ 206
>gi|426363007|ref|XP_004048639.1| PREDICTED: proteasome subunit beta type-7 [Gorilla gorilla gorilla]
gi|426363009|ref|XP_004048640.1| PREDICTED: proteasome subunit beta type-7 [Gorilla gorilla gorilla]
Length = 277
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 20/151 (13%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G PR + L + L Y L+ G
Sbjct: 90 GTAADTDMTTQLISSNLELHSLSTGR--LPRVVT--ANRMLKQMLFRYQGYIGAALVLGG 145
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV-------- 116
GP L+ I S ++PY+T G + +++ + R E+++ N+
Sbjct: 146 VDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPEMEEEEAKNLVSEAIAAG 205
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKN 139
N + ++SK+ + L P N
Sbjct: 206 IFNDLGSGSNIDLCVISKNKLDFLRPYTVPN 236
>gi|384501018|gb|EIE91509.1| hypothetical protein RO3G_16220 [Rhizopus delemar RA 99-880]
Length = 204
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + D + A+ +YKMR E+ P+A A+ L Y R PY +IAG
Sbjct: 55 GLATDVITLADRFRFKTNMYKMREEREIEPKALAHMVSSTL--YERRFGPYFVEPVIAGL 112
Query: 65 DPEEGPQLFFIDYLASL 81
D P + +D + +
Sbjct: 113 DKHNKPFICSMDLIGCI 129
>gi|70987129|ref|XP_749045.1| proteasome component Pre3 [Aspergillus fumigatus Af293]
gi|66846675|gb|EAL87007.1| proteasome component Pre3, putative [Aspergillus fumigatus Af293]
gi|159123184|gb|EDP48304.1| proteasome component Pre3, putative [Aspergillus fumigatus A1163]
Length = 221
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G + DT A+ ++ ++ +Y + N S + AA ++ E ++ + ++IAG
Sbjct: 63 SGSAADTQAVADIVSYHLNMYGIVNNEPPSTQVAAALFQELCYE---NKDMLSAGIIIAG 119
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHG 90
+DP G Q++ I SL + PY G
Sbjct: 120 YDPRHGGQVYSIPLGGSLHKQPYAIGG 146
>gi|408404082|ref|YP_006862065.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364678|gb|AFU58408.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 219
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNML 60
M + G D + + N LY+ +N + ++AA L + + PY ++
Sbjct: 62 MTIAGGVADAQNLVDTMRYNANLYRFQNKELMPVKSAARLCSNIL--FNQRYFPYYVQII 119
Query: 61 IAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINVPNFK 120
+AG+ EG Q+ ID S+ +I+ G V Y SE + + +N +K
Sbjct: 120 MAGYTKNEGSQIHNIDLFGSMTTEKFISTGSGSPVAYG----YLESEYRDGMSVN-DAYK 174
Query: 121 VTM 123
V M
Sbjct: 175 VAM 177
>gi|134081009|emb|CAK41521.1| unnamed protein product [Aspergillus niger]
Length = 199
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G + DT A+ ++ ++ +Y + N S + AA ++ E ++ + ++IAG
Sbjct: 43 SGSAADTQAVADIVSYHLNMYSITNNEAPSTQVAASLFQELCYE---NKDMLSAGIIIAG 99
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHG 90
+DP+ G Q++ I SL + P+ G
Sbjct: 100 YDPKHGGQVYSIPLGGSLHKQPFSIGG 126
>gi|403418153|emb|CCM04853.1| predicted protein [Fibroporia radiculosa]
Length = 240
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G + DT A+ + ++Q Y+ G S AAA K E ++ + +++ G
Sbjct: 63 SGSAADTQAIADIVHYHLQSYRQTQGESPSVHAAASIFEKLCYE---NKDALSAGIIVGG 119
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHG 90
D E GP ++ I L P+ G
Sbjct: 120 WDKETGPSVYNIPLGGGLFRQPWAIGG 146
>gi|301618803|ref|XP_002938794.1| PREDICTED: proteasome subunit beta type-7-like [Xenopus (Silurana)
tropicalis]
Length = 277
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G LS A A KQ+ R + +++ G
Sbjct: 90 GTAADTEMTTQMISSNMELHSLSTG-RLSRVATANRMLKQM--LFRYQGYIGAALVLGGV 146
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQK 110
D GP L+ I S ++PY+T G + +++ + ++ ++++
Sbjct: 147 DCT-GPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYKPDMEE 191
>gi|195027377|ref|XP_001986559.1| GH20460 [Drosophila grimshawi]
gi|193902559|gb|EDW01426.1| GH20460 [Drosophila grimshawi]
Length = 280
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 3 VTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIA 62
+ G + D V + +AK +L+++RN +S AA+ EY + M++A
Sbjct: 118 LAGGAADCVYWDRVLAKECRLHELRNKERISVAAASKIMANIAHEY--KGMGLSMGMMLA 175
Query: 63 GHDPEEGPQLFFID 76
G+D + GP L+++D
Sbjct: 176 GYD-KRGPGLYYVD 188
>gi|348570104|ref|XP_003470837.1| PREDICTED: proteasome subunit beta type-7-like [Cavia porcellus]
Length = 277
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 61/151 (40%), Gaps = 20/151 (13%)
Query: 5 GDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGH 64
G + DT + I+ N++L+ + G PR + L + L Y L+ G
Sbjct: 90 GTAADTDMTTQLISSNLELHSLTTGR--LPRVVT--ANRMLKQMLFRYQGYIGAALVLGG 145
Query: 65 DPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ----KRLIINV---- 116
GP L+ I S ++PY+T G + +++ + R +++ K+L+
Sbjct: 146 IDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAG 205
Query: 117 --------PNFKVTMVSKDGIKHLPPIKAKN 139
N + ++SK+ + L P N
Sbjct: 206 IFNDLGSGSNIDLCVISKNKLDFLRPFSVPN 236
>gi|409049925|gb|EKM59402.1| hypothetical protein PHACADRAFT_249865 [Phanerochaete carnosa
HHB-10118-sp]
Length = 236
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 4 TGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAG 63
+G + DT A+ + N+Q+ + G+ S AA ++ E ++ + +++AG
Sbjct: 62 SGSAADTQAVADAVHYNLQMITQQFGHPPSVSVAANVFQRICYE---NKDALSAGIIVAG 118
Query: 64 HDPEEGPQLFFIDYLASLIEIPYITHG 90
D EEGP ++ I L P+ G
Sbjct: 119 WDKEEGPSVYNIPLGGGLFRQPWAIGG 145
>gi|401883133|gb|EJT47367.1| proteasome subunit, beta type, 7 [Trichosporon asahii var. asahii
CBS 2479]
gi|406702501|gb|EKD05517.1| proteasome subunit, beta type, 7 [Trichosporon asahii var. asahii
CBS 8904]
Length = 282
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 20/134 (14%)
Query: 15 EFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSRSPYNCNMLIAGHDPEEGPQLFF 74
+ I+ N++L+ + G A ++ L Y Y L+ G GPQLF
Sbjct: 78 KLISSNLELHSLSQGRPARVVTAMTMLKQYLYRYQGHIGAY----LVVGGVDATGPQLFT 133
Query: 75 IDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQKRLIINV----------------PN 118
+ S ++PY+T G + ++I ++ + ++ I++ N
Sbjct: 134 VHAHGSTDKLPYVTMGSGSLAAMAIFESAYKENMTRKEAIDLVARAIRSGVFNDLGSGSN 193
Query: 119 FKVTMVSKDGIKHL 132
V +++K G + L
Sbjct: 194 VDVCVITKSGTETL 207
>gi|315425374|dbj|BAJ47040.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 223
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
Query: 1 MAVTGDSGDTVQFAEFIAKNIQLYKMRNGYELSPRAAAYYTRKQLAEYLRSR-SPYNCNM 59
+ + G D + I NI Y++ G +S A A T + SR P+ +
Sbjct: 59 ITIAGRVADAQTLIDLIKANINYYQIMRGQVMSLPAVARLTSSLM---FSSRYFPFYAQL 115
Query: 60 LIAGHDPEEGPQLFFIDYLASLIEIPYITHGYPGIVTLSIMGEYHRSEVQ 109
++AG D EGP L+ +D S+ E I G V ++ +R ++
Sbjct: 116 ILAGVD-NEGPHLYNLDPFGSVTEEKLIATGSGSPVAYGVLEPNYREDMD 164
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,574,654,673
Number of Sequences: 23463169
Number of extensions: 98025583
Number of successful extensions: 199372
Number of sequences better than 100.0: 842
Number of HSP's better than 100.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 400
Number of HSP's that attempted gapping in prelim test: 198170
Number of HSP's gapped (non-prelim): 849
length of query: 160
length of database: 8,064,228,071
effective HSP length: 122
effective length of query: 38
effective length of database: 9,496,688,749
effective search space: 360874172462
effective search space used: 360874172462
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)