Query psy12631
Match_columns 185
No_of_seqs 155 out of 290
Neff 4.1
Searched_HMMs 29240
Date Fri Aug 16 15:35:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12631.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12631hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r8u_A Microtubule-associated 100.0 4.2E-56 1.4E-60 386.3 10.4 133 1-160 1-136 (268)
2 1wyo_A Protein EB3, microtubul 100.0 1.2E-54 4.2E-59 353.2 10.6 133 1-160 8-143 (159)
3 4abo_I MAL3, microtubule integ 100.0 2.6E-54 9.1E-59 347.0 9.0 128 13-168 4-134 (145)
4 2qjx_A Protein BIM1; calponin 100.0 2.5E-52 8.7E-57 328.9 9.5 117 13-157 8-127 (127)
5 2qjz_A Microtubule-associated 100.0 7.6E-52 2.6E-56 324.2 10.0 119 12-157 2-123 (123)
6 2d89_A EHBP1 protein; all alph 98.4 1.2E-06 4.3E-11 66.8 9.7 100 11-139 5-111 (119)
7 2d87_A Smoothelin splice isofo 98.3 2.4E-06 8.3E-11 66.2 9.1 98 13-139 5-110 (128)
8 1wyq_A Spectrin beta chain, br 98.3 3.5E-06 1.2E-10 65.1 8.6 111 13-154 5-122 (127)
9 1wjo_A T-plastin; CH domain, a 98.3 3E-06 1E-10 66.0 8.3 94 12-130 4-107 (124)
10 1bkr_A Spectrin beta chain; fi 98.1 1.4E-05 4.8E-10 60.1 8.2 95 16-139 4-105 (109)
11 1bhd_A Utrophin; calponin homo 98.0 1.5E-05 5.3E-10 60.7 7.4 97 14-139 7-110 (118)
12 2d88_A Protein mical-3; all al 98.0 3.1E-05 1.1E-09 59.2 9.0 99 13-139 7-112 (121)
13 1wyl_A NEDD9 interacting prote 98.0 4E-05 1.4E-09 58.1 9.0 94 14-139 6-108 (116)
14 1h67_A Calponin alpha; cytoske 97.9 1.2E-05 4E-10 60.2 5.2 70 17-87 5-77 (108)
15 2yrn_A Neuron navigator 2 isof 97.9 2.3E-05 7.8E-10 59.9 6.6 98 17-139 20-125 (129)
16 1ujo_A Transgelin; CH domain, 97.9 3.7E-05 1.3E-09 60.4 7.8 75 13-87 7-93 (144)
17 1wku_A Alpha-actinin 3; calpon 97.8 7.3E-05 2.5E-09 63.0 9.2 94 16-137 141-241 (254)
18 1wyn_A Calponin-2; CH domain, 97.8 4.7E-05 1.6E-09 60.0 7.1 70 17-87 19-91 (146)
19 1wyp_A Calponin 1; CH domain, 97.8 4.3E-05 1.5E-09 59.5 6.3 69 17-86 19-90 (136)
20 3i6x_A P195, RAS GTPase-activa 97.8 2.7E-05 9.3E-10 64.2 5.3 71 16-86 48-132 (193)
21 1p2x_A RNG2 protein, RAS GTPas 97.7 5.7E-05 2E-09 60.2 6.0 72 16-87 12-88 (159)
22 1wym_A Transgelin-2; CH domain 97.7 8.4E-05 2.9E-09 59.0 6.7 70 17-87 19-100 (155)
23 2ee7_A Sperm flagellar protein 97.6 0.00042 1.4E-08 54.1 9.4 102 13-139 13-120 (127)
24 1wyr_A RHO guanine nucleotide 97.5 0.00021 7E-09 54.7 6.6 71 12-83 3-85 (121)
25 1pxy_A Fimbrin-like protein; c 97.4 0.0005 1.7E-08 62.8 9.4 99 13-139 395-502 (506)
26 1p5s_A RAS GTPase-activating-l 97.4 0.00016 5.4E-09 60.0 5.3 72 16-87 56-132 (203)
27 2wa7_A Filamin-B; disease muta 97.4 0.00046 1.6E-08 57.6 8.2 95 16-139 144-243 (245)
28 1sh5_A Plectin 1, PLTN, PCN; a 97.4 0.00015 5E-09 60.3 5.0 81 14-122 131-219 (245)
29 1rt8_A Fimbrin; filamentous ac 97.4 0.00067 2.3E-08 62.1 9.4 85 13-122 406-499 (513)
30 2l3g_A RHO guanine nucleotide 97.4 0.00033 1.1E-08 54.1 6.2 69 12-81 9-89 (126)
31 2rr8_A Iqgap1 protein; F-actin 97.3 0.00018 6.3E-09 58.8 4.8 71 17-87 27-111 (190)
32 1dxx_A Dystrophin; structural 97.3 0.00035 1.2E-08 58.3 6.1 81 15-123 135-223 (246)
33 1aoa_A T-fimbrin; actin-bindin 97.2 0.00064 2.2E-08 57.5 6.7 85 17-126 170-266 (275)
34 1pxy_A Fimbrin-like protein; c 97.1 0.00054 1.9E-08 62.5 5.5 69 15-85 152-226 (506)
35 3hoc_A Filamin-A; calponin hom 97.1 0.0009 3.1E-08 57.5 6.4 96 15-139 170-270 (272)
36 1rt8_A Fimbrin; filamentous ac 97.0 0.00094 3.2E-08 61.1 5.9 69 16-86 162-236 (513)
37 2vzc_A Alpha-parvin; membrane, 96.8 0.0055 1.9E-07 47.2 8.1 90 17-130 24-120 (131)
38 4b7l_A Filamin-B; structural p 96.7 0.0061 2.1E-07 53.6 8.7 96 14-139 139-240 (347)
39 1wku_A Alpha-actinin 3; calpon 96.6 0.0071 2.4E-07 50.8 8.2 71 16-86 28-102 (254)
40 3f7p_A Plectin-1; plakin, hemi 96.6 0.0041 1.4E-07 54.1 6.9 97 13-138 186-290 (296)
41 1aoa_A T-fimbrin; actin-bindin 96.6 0.0042 1.4E-07 52.4 6.7 70 17-86 26-111 (275)
42 1sh5_A Plectin 1, PLTN, PCN; a 96.5 0.013 4.3E-07 48.6 8.9 71 15-86 12-91 (245)
43 1dxx_A Dystrophin; structural 96.1 0.011 3.7E-07 49.2 6.5 72 14-86 15-91 (246)
44 1sjj_A Actinin; 3-helix bundle 96.0 0.0038 1.3E-07 58.9 3.7 95 16-139 122-224 (863)
45 3f7p_A Plectin-1; plakin, hemi 96.0 0.024 8.1E-07 49.3 8.3 68 17-85 75-146 (296)
46 2wa7_A Filamin-B; disease muta 95.9 0.03 1E-06 46.6 8.2 72 15-86 20-97 (245)
47 1sjj_A Actinin; 3-helix bundle 95.0 0.037 1.3E-06 52.2 6.4 71 16-86 9-83 (863)
48 3hoc_A Filamin-A; calponin hom 94.7 0.13 4.3E-06 44.1 8.4 70 16-85 48-123 (272)
49 3ky9_A Proto-oncogene VAV; cal 94.6 0.059 2E-06 49.5 6.6 71 17-87 7-94 (587)
50 4b7l_A Filamin-B; structural p 92.4 0.63 2.2E-05 40.7 9.1 68 18-85 20-93 (347)
51 1wix_A HOOK homolog 1, RSGI RU 91.1 0.11 3.9E-06 41.4 2.6 66 15-80 9-82 (164)
52 2krx_A ASL3597 protein; struct 20.5 55 0.0019 24.3 2.2 25 6-30 14-39 (94)
53 1t9i_A DNA endonuclease I-CREI 20.4 51 0.0017 25.4 2.2 18 124-141 4-21 (163)
No 1
>2r8u_A Microtubule-associated protein RP/EB family member 1; cytoskeleton, acetylation, cell cycle, cell division, cytoplasm, mitosis, phosphorylation; 1.35A {Homo sapiens} SCOP: a.40.1.1 PDB: 1vka_A 1txq_B 1wu9_A 2hkq_A 2hl5_A 3tq7_A 3gjo_A 1yib_A 1yig_A
Probab=100.00 E-value=4.2e-56 Score=386.28 Aligned_cols=133 Identities=41% Similarity=0.654 Sum_probs=122.3
Q ss_pred CceeeEecCCCCCcccHHHHHHHhHHHhcCCcchhhhcCCCchHHHhhHhhcCCcccee---ccCCCHHHHHHHHHHHHh
Q psy12631 1 MAINVYSTNVTSENLSRHDMLHWVNDTLQSSFGKIEELCSGAAYCQFMDMLFPGLYSIF---ILRNLLHTFVLHLILKAQ 77 (185)
Q Consensus 1 mavNV~~t~~~~~~~SR~ELL~WiN~~L~~~~tKIEel~tGAaYCQlmD~lfPg~Ipmk---Fna~~e~E~i~NfKlLQ~ 77 (185)
||+||++|+++++++||+|||+|||++|+++|+||||||||||||||||+||||+|||+ |+|++||||++|||+||+
T Consensus 1 ma~nv~~t~~~~~~~sR~elL~WiN~~L~~~~~kiEel~tGaayCQlmd~l~P~~i~l~kVkf~a~~e~e~i~N~k~LQ~ 80 (268)
T 2r8u_A 1 MAVNVYSTSVTSDNLSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQA 80 (268)
T ss_dssp CCCCCCTTSCCCCCCCHHHHHHHHHHHHTCCCCCGGGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHH
T ss_pred CceeEecccCcccccCHHHHHHHHHHHhcCCcchHHHcccchHHHHHHHHHccCCCchhhccCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999997 999999999999999999
Q ss_pred hhhhhhhccCCCccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHHHHhhccCCCCcccccccce
Q psy12631 78 QDSKNRRAKGYGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVAVIYHRIRIGTYLPTRTHL 157 (185)
Q Consensus 78 af~Kn~i~k~~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~dan~~~~~~~yd~~~~R~~~ 157 (185)
+ |.+++|+++|||++||||+|||||||+||||+|||+| +.. .+||++++|.++
T Consensus 81 ~-------------------------F~k~~I~k~ipV~kLvkgk~qDNlEFlqWfkkf~d~n-~~~-~~Yd~~~~R~g~ 133 (268)
T 2r8u_A 81 G-------------------------FKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDAN-YDG-KDYDPVAARQGQ 133 (268)
T ss_dssp H-------------------------HHHTTCCCCCCHHHHTTTCHHHHHHHHHHHHHHHHHH-CCC-CCCCHHHHTC--
T ss_pred H-------------------------HHHcCCCCccCHHHHhccCchhHHHHHHHHHHHHHHc-CCC-CCCCHHHHhcCC
Confidence 8 5577788899999999999999999999999999995 443 899999999988
Q ss_pred eee
Q psy12631 158 LVL 160 (185)
Q Consensus 158 ~~~ 160 (185)
...
T Consensus 134 ~~~ 136 (268)
T 2r8u_A 134 ETA 136 (268)
T ss_dssp ---
T ss_pred CCC
Confidence 663
No 2
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=1.2e-54 Score=353.16 Aligned_cols=133 Identities=44% Similarity=0.636 Sum_probs=125.4
Q ss_pred CceeeEecCCCCCcccHHHHHHHhHHHhcCCcchhhhcCCCchHHHhhHhhcCCcccee---ccCCCHHHHHHHHHHHHh
Q psy12631 1 MAINVYSTNVTSENLSRHDMLHWVNDTLQSSFGKIEELCSGAAYCQFMDMLFPGLYSIF---ILRNLLHTFVLHLILKAQ 77 (185)
Q Consensus 1 mavNV~~t~~~~~~~SR~ELL~WiN~~L~~~~tKIEel~tGAaYCQlmD~lfPg~Ipmk---Fna~~e~E~i~NfKlLQ~ 77 (185)
||+||+.|+++++..||+|||+|||++|+++|+|||+||+||+||||||+||||+|||+ |+++.|+||++|||+||+
T Consensus 8 ~~~nv~~t~~~~~~~sr~ElL~WIN~~L~~~~~kiE~L~~GaayCQLmd~L~PgsV~l~KVkf~a~~e~e~~~N~k~lQ~ 87 (159)
T 1wyo_A 8 MAVNVYSTSVTSENLSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQA 87 (159)
T ss_dssp CCCCCCCCSSCCCCCCHHHHHHHHHHHSCCCCSSGGGGGGCHHHHHHHHHHSTTSSCTTSCCTTCCSSHHHHHHHHHHHH
T ss_pred hheeeeeccCCCCchhHHHHHHHHHHHHCCCCchhhhcCccHHHHHHHHHHccCCCcHhhhccCCCChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999996 999999999999999999
Q ss_pred hhhhhhhccCCCccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHHHHhhccCCCCcccccccce
Q psy12631 78 QDSKNRRAKGYGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVAVIYHRIRIGTYLPTRTHL 157 (185)
Q Consensus 78 af~Kn~i~k~~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~dan~~~~~~~yd~~~~R~~~ 157 (185)
|| .++||+++|||++||||+||||+||+||||+|||+| +.. .+|||+++|.++
T Consensus 88 af-------------------------~k~gV~k~ipV~kLvkgk~qdNlEFlqWfk~f~d~n-~~~-~~Yd~~~~R~~~ 140 (159)
T 1wyo_A 88 AF-------------------------KKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDAN-YDG-KDYNPLLARQGQ 140 (159)
T ss_dssp HH-------------------------HHHTCCCCCCHHHHTTTCSHHHHHHHHHHHHHHHTT-CCS-CCCCTTGGGCCC
T ss_pred HH-------------------------HHcCCCCccCHHHHhcCCchhHHHHHHHHHHHHHHc-CCC-CCCCHHHHhCCC
Confidence 85 566778899999999999999999999999999995 443 899999999998
Q ss_pred eee
Q psy12631 158 LVL 160 (185)
Q Consensus 158 ~~~ 160 (185)
..+
T Consensus 141 ~~~ 143 (159)
T 1wyo_A 141 DVA 143 (159)
T ss_dssp TTS
T ss_pred CCC
Confidence 764
No 3
>4abo_I MAL3, microtubule integrity protein MAL3; structural protein, cytoskeleton, GTPase, END binding; HET: GTP GSP; 8.60A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.6e-54 Score=347.02 Aligned_cols=128 Identities=18% Similarity=0.157 Sum_probs=108.0
Q ss_pred CcccHHHHHHHhHHHhcCCcchhhhcCCCchHHHhhHhhcCCcccee---ccCCCHHHHHHHHHHHHhhhhhhhhccCCC
Q psy12631 13 ENLSRHDMLHWVNDTLQSSFGKIEELCSGAAYCQFMDMLFPGLYSIF---ILRNLLHTFVLHLILKAQQDSKNRRAKGYG 89 (185)
Q Consensus 13 ~~~SR~ELL~WiN~~L~~~~tKIEel~tGAaYCQlmD~lfPg~Ipmk---Fna~~e~E~i~NfKlLQ~af~Kn~i~k~~~ 89 (185)
..+||+|||+|||++|+++|+||||||||||||||||+|| |+|||+ |+|+.||||++|||+||++
T Consensus 4 ~~~SR~eLL~WiN~~L~~n~tkIE~l~sGAaYCQlmD~lf-g~i~l~kVkf~a~~e~e~i~NfKlLQ~~----------- 71 (145)
T 4abo_I 4 GSESRQELLAWINQVTSLGLTRIEDCGKGYAMIQIFDSIY-QDIPLKKVNFECNNEYQYINNWKVLQQV----------- 71 (145)
T ss_dssp ---CHHHHHHHHHHHHTCCCCSGGGGGGSHHHHHHHHHHH-CCSCTTTSCSSCCSHHHHHHHHHHHHHH-----------
T ss_pred ccccHHHHHHHHHHHcCCCcchHHHccccHHHHHHHHHHh-cCcchhhcccCCCCHHHHHHHHHHHHHH-----------
Confidence 4689999999999999999999999999999999999999 889996 9999999999999999998
Q ss_pred ccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHHHHhhccCCCCcccccccceeeeeccccCcc
Q psy12631 90 YLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVAVIYHRIRIGTYLPTRTHLLVLLGLVDNRL 168 (185)
Q Consensus 90 ~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~dan~~~~~~~yd~~~~R~~~~~~l~~~~~~~ 168 (185)
|++++|+++|||++||||+||||+||+||||+|||+| +. -.+|||+++|+++.+....+...+
T Consensus 72 --------------F~k~~I~k~ipV~kLvKgk~QDNlEFlQWfkkf~d~n-~~-~~~YD~~~~R~g~~~~~~~~~~~s 134 (145)
T 4abo_I 72 --------------FLKKGIDKVVDPERLSRCKMQDNLEFVQWAKRFWDQY-YP-GGDYDALARRGNRGPANTRVMNSS 134 (145)
T ss_dssp --------------HHHHTCCCCCCHHHHTTTCHHHHHHHHHHHHHHHHHH-CC-SSCCCHHHHHTCC-----------
T ss_pred --------------HHHcCCCCccCHHHHhccchHhHHHHHHHHHHHHHhc-CC-CCCCCHHHhcCCCCccccCCcccC
Confidence 5567788899999999999999999999999999995 44 378999999999988775555544
No 4
>2qjx_A Protein BIM1; calponin homology domain, protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-52 Score=328.94 Aligned_cols=117 Identities=24% Similarity=0.309 Sum_probs=106.6
Q ss_pred CcccHHHHHHHhHHHhcCCcchhhhcCCCchHHHhhHhhcCCcccee---ccCCCHHHHHHHHHHHHhhhhhhhhccCCC
Q psy12631 13 ENLSRHDMLHWVNDTLQSSFGKIEELCSGAAYCQFMDMLFPGLYSIF---ILRNLLHTFVLHLILKAQQDSKNRRAKGYG 89 (185)
Q Consensus 13 ~~~SR~ELL~WiN~~L~~~~tKIEel~tGAaYCQlmD~lfPg~Ipmk---Fna~~e~E~i~NfKlLQ~af~Kn~i~k~~~ 89 (185)
.+.||+|||+|||++|+++|+||||||||||||||||+|| |+|||+ |+|++||||++|||+||++
T Consensus 8 ~~~sR~elL~WiN~~L~~n~~kiEel~tGaayCQl~d~l~-g~v~l~kVkf~a~~e~e~~~N~k~LQ~~----------- 75 (127)
T 2qjx_A 8 IGESRTELLTWLNGLLNLNYKKIEECGTGAAYCQIMDSIY-GDLPMNRVKFNATAEYEFQTNYKILQSC----------- 75 (127)
T ss_dssp ---CHHHHHHHHHHHHTCCCCSGGGGGGSHHHHHHHHHHH-CCSCGGGSCTTCCSHHHHHHHHHHHHHH-----------
T ss_pred cccCHHHHHHHHHHHHcCCccHHHHccchHHHHHHHhhhc-cccCccccCCCCCCHHHHHHHHHHHHHH-----------
Confidence 6789999999999999999999999999999999999999 569997 9999999999999999998
Q ss_pred ccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHHHHhhccCCCCcccccccce
Q psy12631 90 YLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVAVIYHRIRIGTYLPTRTHL 157 (185)
Q Consensus 90 ~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~dan~~~~~~~yd~~~~R~~~ 157 (185)
|++++|+++|||++||||+||||+||+||||+|||+| + ..++|||+++|+.+
T Consensus 76 --------------f~k~~I~k~ipV~kLvKgrfQDNlEFlQWfkkf~d~n-~-~g~~YDa~~~R~~~ 127 (127)
T 2qjx_A 76 --------------FSRHGIEKTVYVDKLIRCKFQDNLEFLQWLKKHWIRH-K-DESVYDPDARRKYR 127 (127)
T ss_dssp --------------HHHTTCCCCCCHHHHTTTCHHHHHHHHHHHHHHHHHH-C-CSSCCCHHHHTTTC
T ss_pred --------------HHHcCCCCccCHHHHhccCchhHHHHHHHHHHHHHhc-C-CCCCCCHHHhhccC
Confidence 4567778899999999999999999999999999995 4 35899999999753
No 5
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=100.00 E-value=7.6e-52 Score=324.15 Aligned_cols=119 Identities=38% Similarity=0.581 Sum_probs=110.7
Q ss_pred CCcccHHHHHHHhHHHhcCCcchhhhcCCCchHHHhhHhhcCCcccee---ccCCCHHHHHHHHHHHHhhhhhhhhccCC
Q psy12631 12 SENLSRHDMLHWVNDTLQSSFGKIEELCSGAAYCQFMDMLFPGLYSIF---ILRNLLHTFVLHLILKAQQDSKNRRAKGY 88 (185)
Q Consensus 12 ~~~~SR~ELL~WiN~~L~~~~tKIEel~tGAaYCQlmD~lfPg~Ipmk---Fna~~e~E~i~NfKlLQ~af~Kn~i~k~~ 88 (185)
++++||+|||+|||++|+++++|||+||+|||||||||+||||+|||+ |+++.|+||++|||+||+||
T Consensus 2 ~~~~sr~ElL~WIN~~L~~~~~kiE~L~~Ga~yCqlmd~l~Pg~v~l~KVkf~a~~e~e~~~N~k~lq~af--------- 72 (123)
T 2qjz_A 2 SDNLSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGF--------- 72 (123)
T ss_dssp -CCCCHHHHHHHHHHHHTCCCCCGGGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHH---------
T ss_pred CccccHHHHHHHHHHHHCCCCchHHHcCchHHHHHHHHHHccCCCcHHHhccCCCChHHHHHHHHHHHHHH---------
Confidence 478999999999999999999999999999999999999999999996 99999999999999999985
Q ss_pred CccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHHHHhhccCCCCcccccccce
Q psy12631 89 GYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVAVIYHRIRIGTYLPTRTHL 157 (185)
Q Consensus 89 ~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~dan~~~~~~~yd~~~~R~~~ 157 (185)
.++||+++|||++||||+||||+||+||||+|||+|. . -++|||+++|.++
T Consensus 73 ----------------~k~gV~k~i~v~kLvkgk~qdnleflqW~k~f~d~n~-~-~~~Yd~~~~R~~~ 123 (123)
T 2qjz_A 73 ----------------KRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANY-D-GKDYDPVAARQGQ 123 (123)
T ss_dssp ----------------HHHTCCCCCCHHHHTTCCHHHHHHHHHHHHHHHHHHC-C-CCCCCHHHHTSCC
T ss_pred ----------------HHcCCCCccCHHHHHcCCchhHHHHHHHHHHHHHHcC-C-CCCCCHHHhhCcC
Confidence 5667778999999999999999999999999999954 3 3899999999874
No 6
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.44 E-value=1.2e-06 Score=66.76 Aligned_cols=100 Identities=16% Similarity=0.231 Sum_probs=75.4
Q ss_pred CCCcccHHHHHHHhHHHhcCCc--chhhhc----CCCchHHHhhHhhcCCcccee-ccCCCHHHHHHHHHHHHhhhhhhh
Q psy12631 11 TSENLSRHDMLHWVNDTLQSSF--GKIEEL----CSGAAYCQFMDMLFPGLYSIF-ILRNLLHTFVLHLILKAQQDSKNR 83 (185)
Q Consensus 11 ~~~~~SR~ELL~WiN~~L~~~~--tKIEel----~tGAaYCQlmD~lfPg~Ipmk-Fna~~e~E~i~NfKlLQ~af~Kn~ 83 (185)
......+..||.|+|..++- | .+|... .+|-|+|.|++.+.|+.|++. ..+ .+-++|.+. ||+
T Consensus 5 ~~~~~~~~~LL~W~~~~~~~-y~~v~v~nFs~sw~dG~af~aLi~~~~P~lid~~~l~~---~~~~~n~~~---af~--- 74 (119)
T 2d89_A 5 SSGPNASQSLLVWCKEVTKN-YRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNP---QDIKENNKK---AYD--- 74 (119)
T ss_dssp SSCCCCHHHHHHHHHHHTTT-CSSCCCCCSSHHHHTTHHHHHHHHHHCTTTSCGGGCCT---TCSHHHHHH---HHH---
T ss_pred CCCCCHHHHHHHHHHHHhcc-CCCCCCCCccccccccHHHHHHHHHHCcCcCChhhhcc---cCHHHHHHH---HHH---
Confidence 34566788999999999963 2 234444 589999999999999999865 444 345667654 343
Q ss_pred hccCCCccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHHH
Q psy12631 84 RAKGYGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVA 139 (185)
Q Consensus 84 i~k~~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~da 139 (185)
+.+++||++.++.+.++.+.-.|-.-.+.++..||..
T Consensus 75 -------------------~a~~LGi~~ll~peDi~~~~~pD~ksvmtYvs~l~~~ 111 (119)
T 2d89_A 75 -------------------GFASIGISRLLEPSDMVLLAIPDKLTVMTYLYQIRAH 111 (119)
T ss_dssp -------------------HHHHHTCCCCSCHHHHHHSSSCCHHHHHHHHHHHHHH
T ss_pred -------------------HHHHhCCCcccCHHHHhccCCCcHHHHHHHHHHHHHH
Confidence 1357888899999999988778888888888888766
No 7
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=98.34 E-value=2.4e-06 Score=66.15 Aligned_cols=98 Identities=14% Similarity=0.213 Sum_probs=72.0
Q ss_pred CcccHHHHHHHhHHHhcCCc--chhhh----cCCCchHHHhhHhhcCCcccee-ccCCCHHHHHHHHHHHHhhhhhhhhc
Q psy12631 13 ENLSRHDMLHWVNDTLQSSF--GKIEE----LCSGAAYCQFMDMLFPGLYSIF-ILRNLLHTFVLHLILKAQQDSKNRRA 85 (185)
Q Consensus 13 ~~~SR~ELL~WiN~~L~~~~--tKIEe----l~tGAaYCQlmD~lfPg~Ipmk-Fna~~e~E~i~NfKlLQ~af~Kn~i~ 85 (185)
..-.+..||.|+|..++- | .+|.. ..+|-|+|.|++.+.|+.|++. .++ .+-++|++. ||+
T Consensus 5 ~~~~k~~LL~W~q~~~~~-y~~v~V~nFs~sw~DG~af~aLih~~~P~lid~~~l~~---~~~~~n~~~---af~----- 72 (128)
T 2d87_A 5 SSGIKQMLLDWCRAKTRG-YEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSP---QNRRQNFEV---AFS----- 72 (128)
T ss_dssp SCCHHHHHHHHHHHHSSS-CTTCCCSCTTTTTTSSHHHHHHHHHHCTTTSCSTTSCS---SCHHHHHHH---HHH-----
T ss_pred cCCHHHHHHHHHHHHhcc-CCCCCCCCccccccccHHHHHHHHHHCcCcCCHHHcCc---cCHHHHHHH---HHH-----
Confidence 445678899999999873 2 13444 4789999999999999999865 443 355667554 343
Q ss_pred cCCCccccchhhhhhHHHHhh-hccccccchhhhhcccccchHHHHHHHHHHHHH
Q psy12631 86 KGYGYLGIWTAWHFVAVIYHR-IRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVA 139 (185)
Q Consensus 86 k~~~~~~~~~~~~~v~~~f~r-~~i~~~ipV~kLvkg~~qDNleflqW~k~f~da 139 (185)
+.++ +||++.++.+.++.+.-.|-.-.+.++..||..
T Consensus 73 -----------------~Ae~~lgip~lL~peD~v~~~~pD~ksvmtYvs~l~~~ 110 (128)
T 2d87_A 73 -----------------SAETHADCPQLLDTEDMVRLREPDWKCVYTYIQEFYRC 110 (128)
T ss_dssp -----------------HHHHHHCCCCCSCHHHHHHSSSCCHHHHHHHHHHHHHH
T ss_pred -----------------HHHHcCCCCcccCHHHHhccCCccHHHHHHHHHHHHHH
Confidence 1233 789999999999998877777777777777665
No 8
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=98.27 E-value=3.5e-06 Score=65.11 Aligned_cols=111 Identities=9% Similarity=0.125 Sum_probs=74.0
Q ss_pred CcccHHHHHHHhHHHhcCCcc--hhhhc----CCCchHHHhhHhhcCCcccee-ccCCCHHHHHHHHHHHHhhhhhhhhc
Q psy12631 13 ENLSRHDMLHWVNDTLQSSFG--KIEEL----CSGAAYCQFMDMLFPGLYSIF-ILRNLLHTFVLHLILKAQQDSKNRRA 85 (185)
Q Consensus 13 ~~~SR~ELL~WiN~~L~~~~t--KIEel----~tGAaYCQlmD~lfPg~Ipmk-Fna~~e~E~i~NfKlLQ~af~Kn~i~ 85 (185)
....+..||.|+|..+.- |. +|..+ .+|-|||.|++.+.|+.|++. +.+. +-++|++..-+..
T Consensus 5 ~~s~k~~LL~W~q~~~~~-y~~v~V~nFs~sw~DG~Af~aLih~~~P~lid~~~l~~~---~~~~n~~~af~~A------ 74 (127)
T 1wyq_A 5 SSGAKDALLLWCQMKTAG-YPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKC---NAHYNLQNAFNLA------ 74 (127)
T ss_dssp CCCSTHHHHHHHHHHHHT-SSSCCCSCSSTTSSSSHHHHHHHHHHCTTTCCTTTSCSS---CCHHHHHHHHHHH------
T ss_pred cCCHHHHHHHHHHHHHhc-CCCCCCCCCcccccccHHHHHHHHHHCcCcCCHHHhCcC---CHHHHHHHHHHHH------
Confidence 455678899999998752 22 45555 789999999999999999865 5443 3456655543221
Q ss_pred cCCCccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHHHHhhccCCCCcccccc
Q psy12631 86 KGYGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVAVIYHRIRIGTYLPTR 154 (185)
Q Consensus 86 k~~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~dan~~~~~~~yd~~~~R 154 (185)
-.++||++.++.+.++.+. .|-.-.+.++..||.. +.+.+..+..++|
T Consensus 75 ------------------e~~Lgi~~ll~~eDv~~~~-pDeksimtYvs~l~~~--~~~~~~~~~~~~r 122 (127)
T 1wyq_A 75 ------------------EKELGLTKLLDPEDVNVDQ-PDEKSIITYVATYYHY--FSKMKALAVEGKS 122 (127)
T ss_dssp ------------------HHTTCCCCCSCTTTSCSSS-CCHHHHHHHHHHHHHH--HHHSSSCCSSCCC
T ss_pred ------------------HHHcCCCcccCHHHhccCC-CcHHHHHHHHHHHHHH--hhcCCcccccccc
Confidence 2357888888888876544 5666677777666665 3344444555544
No 9
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=98.27 E-value=3e-06 Score=66.03 Aligned_cols=94 Identities=18% Similarity=0.136 Sum_probs=73.3
Q ss_pred CCcccHHHHHHHhHHHhcC-----Ccchhh--hcCCCchHHHhhHhhcCCcccee-c-cCC-CHHHHHHHHHHHHhhhhh
Q psy12631 12 SENLSRHDMLHWVNDTLQS-----SFGKIE--ELCSGAAYCQFMDMLFPGLYSIF-I-LRN-LLHTFVLHLILKAQQDSK 81 (185)
Q Consensus 12 ~~~~SR~ELL~WiN~~L~~-----~~tKIE--el~tGAaYCQlmD~lfPg~Ipmk-F-na~-~e~E~i~NfKlLQ~af~K 81 (185)
...++..+||.|+|+.++. .++... ++.+|.+||+|++.|-|+.|+.+ . ... ++.|-..|.+..=++
T Consensus 4 ~~~i~d~~ll~W~N~kl~~~g~~~~I~~F~d~sl~dG~~~l~Ll~~i~P~~vd~~lv~~~~L~~~d~~~Na~~ais~--- 80 (124)
T 1wjo_A 4 GSSGNDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSM--- 80 (124)
T ss_dssp SCCSCCHHHHHHHHHHHHHHTCSCCCSCTTCTTGGGTHHHHHHHHHHSTTSCCTTTSCCSSCCHHHHHHHHHHHHHH---
T ss_pred CCccCHHHHHHHHHHHHHhcCCCcccCCCCcchhhhhHHHHHHHHHHCcCccCHHHhcCCCCCHHHHHHHHHHHHHH---
Confidence 4678899999999999984 344443 78899999999999999999877 3 334 688999999986443
Q ss_pred hhhccCCCccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHH
Q psy12631 82 NRRAKGYGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLG 130 (185)
Q Consensus 82 n~i~k~~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNlefl 130 (185)
-.++|++..+..+.++.++-.=++-|.
T Consensus 81 ----------------------ArklG~~~~l~pEDIve~~pK~ilt~v 107 (124)
T 1wjo_A 81 ----------------------ARRIGARVYALPEDLVEVKPKMVMTVF 107 (124)
T ss_dssp ----------------------HHHTCCSCCCCHHHHHHTCTTTTTHHH
T ss_pred ----------------------HHHcCCCcccCHHHHhcCcchhhHHHH
Confidence 246777788888889888776666554
No 10
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=98.08 E-value=1.4e-05 Score=60.05 Aligned_cols=95 Identities=11% Similarity=0.170 Sum_probs=66.7
Q ss_pred cHHHHHHHhHHHhcCCcc--hhhhc----CCCchHHHhhHhhcCCcccee-ccCCCHHHHHHHHHHHHhhhhhhhhccCC
Q psy12631 16 SRHDMLHWVNDTLQSSFG--KIEEL----CSGAAYCQFMDMLFPGLYSIF-ILRNLLHTFVLHLILKAQQDSKNRRAKGY 88 (185)
Q Consensus 16 SR~ELL~WiN~~L~~~~t--KIEel----~tGAaYCQlmD~lfPg~Ipmk-Fna~~e~E~i~NfKlLQ~af~Kn~i~k~~ 88 (185)
.+..||.|+|..++- |. +|... .+|-|+|.|++.+.|+.|++. ..+. +-.+|++. ||+
T Consensus 4 ~k~~LL~W~q~~~~~-y~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~---~~~~n~~~---af~-------- 68 (109)
T 1bkr_A 4 AKDALLLWCQMKTAG-YPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKS---NAHYNLQN---AFN-------- 68 (109)
T ss_dssp HHHHHHHHHHHHTTT-CTTCCCSSSSGGGTTSHHHHHHHHHHCGGGCCGGGCCTT---CHHHHHHH---HHH--------
T ss_pred HHHHHHHHHHHHHcc-CCCCCCCCCcccccccHHHHHHHHHHCcCCCCHHHcCcC---CHHHHHHH---HHH--------
Confidence 467899999998762 32 35554 789999999999999999865 5443 44566544 443
Q ss_pred CccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHHH
Q psy12631 89 GYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVA 139 (185)
Q Consensus 89 ~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~da 139 (185)
+.-.++||++.++.+.++.+. .|-.-.+.++..||..
T Consensus 69 -------------~Ae~~lgi~~ll~~eDv~~~~-pD~ksi~tYvs~~~~~ 105 (109)
T 1bkr_A 69 -------------LAEQHLGLTKLLDPEDISVDH-PDEKSIITYVVTYYHY 105 (109)
T ss_dssp -------------HHHHHHCCCCCCCHHHHSSSS-CCHHHHHHHHHHHHHH
T ss_pred -------------HHHHHcCCCccCCHHHccCCC-CcHHHHHHHHHHHHHH
Confidence 112367888888888876544 6777777777776654
No 11
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=98.01 E-value=1.5e-05 Score=60.68 Aligned_cols=97 Identities=16% Similarity=0.184 Sum_probs=67.5
Q ss_pred cccHHHHHHHhHHHhcCCc--chhhhc----CCCchHHHhhHhhcCCcccee-ccCCCHHHHHHHHHHHHhhhhhhhhcc
Q psy12631 14 NLSRHDMLHWVNDTLQSSF--GKIEEL----CSGAAYCQFMDMLFPGLYSIF-ILRNLLHTFVLHLILKAQQDSKNRRAK 86 (185)
Q Consensus 14 ~~SR~ELL~WiN~~L~~~~--tKIEel----~tGAaYCQlmD~lfPg~Ipmk-Fna~~e~E~i~NfKlLQ~af~Kn~i~k 86 (185)
...++.||.|+|..++ .| .+|... .+|-|+|.|++.+.|+.|++. ..+.. -.+|++. ||+
T Consensus 7 ~~~~~~LL~W~q~~~~-~y~~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~---~~~n~~~---af~------ 73 (118)
T 1bhd_A 7 TNSEKILLSWVRQTTR-PYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVKMS---PIERLEH---AFS------ 73 (118)
T ss_dssp SHHHHHHHHHHHHHHT-TSTTCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHHSC---HHHHHHH---HHH------
T ss_pred CCHHHHHHHHHHHHhc-cCCCCCCCCCcccccCcHHHHHHHHHHCcCcCCHHHhCcCC---HHHHHHH---HHH------
Confidence 3456779999999986 22 245554 579999999999999999865 54433 3455443 443
Q ss_pred CCCccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHHH
Q psy12631 87 GYGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVA 139 (185)
Q Consensus 87 ~~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~da 139 (185)
+.-.++||++.++.+.++.++ .|-.-.+.++..||..
T Consensus 74 ---------------~Ae~~lgi~~ll~~eDv~~~~-pD~ksvmtYvs~l~~~ 110 (118)
T 1bhd_A 74 ---------------KAQTYLGIEKLLDPEDVAVRL-PDKKSIIMYLTSLFEV 110 (118)
T ss_dssp ---------------HHHHHHCCCCCSCHHHHHTSC-CCHHHHHHHHHHHHHH
T ss_pred ---------------HHHHHcCCCcccCHHHhhcCC-CcHHHHHHHHHHHHHH
Confidence 112478888889999887544 6777777777666655
No 12
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=98.01 E-value=3.1e-05 Score=59.22 Aligned_cols=99 Identities=12% Similarity=0.191 Sum_probs=68.5
Q ss_pred CcccHHHHHHHhHHHhcCCc--chhh----hcCCCchHHHhhHhhcCCcccee-ccCCCHHHHHHHHHHHHhhhhhhhhc
Q psy12631 13 ENLSRHDMLHWVNDTLQSSF--GKIE----ELCSGAAYCQFMDMLFPGLYSIF-ILRNLLHTFVLHLILKAQQDSKNRRA 85 (185)
Q Consensus 13 ~~~SR~ELL~WiN~~L~~~~--tKIE----el~tGAaYCQlmD~lfPg~Ipmk-Fna~~e~E~i~NfKlLQ~af~Kn~i~ 85 (185)
....+..||.|+|..++- | .+|. ...+|-|+|-|++.+.|+.|++. ..+ .+-.+|+++. |+
T Consensus 7 ~~~~~~~LL~W~q~~~~~-y~~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~---~~~~~n~~~a---f~----- 74 (121)
T 2d88_A 7 GVARSSKLLGWCQRQTDG-YAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDE---QNVEKNNQLA---FD----- 74 (121)
T ss_dssp SCSSSCHHHHHHHHHSTT-SSSCCCCCSSHHHHTSHHHHHHHHHHCTTTSCTTTSCT---TCHHHHHHHH---HH-----
T ss_pred ccCHHHHHHHHHHHHhcc-CCCCCCCCchhhccccHHHHHHHHHhCcCcCCHHHcCc---cCHHHHHHHH---HH-----
Confidence 344457799999999852 2 1233 45789999999999999998855 444 3456666653 43
Q ss_pred cCCCccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHHH
Q psy12631 86 KGYGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVA 139 (185)
Q Consensus 86 k~~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~da 139 (185)
..-..+||++-++.+.++.+.-.|-.-.+-.+..||..
T Consensus 75 ----------------~Ae~~lgi~~lL~peD~~~~~~pD~ksimtYvs~l~~~ 112 (121)
T 2d88_A 75 ----------------IAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEM 112 (121)
T ss_dssp ----------------HHHHHTCCCCSSCHHHHHHSSCCCHHHHHHHHHHHHHH
T ss_pred ----------------HHHHHcCCCCcCCHHHHhccCCCcHHHHHHHHHHHHHH
Confidence 01124888889999999986666777666666666655
No 13
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=97.97 E-value=4e-05 Score=58.11 Aligned_cols=94 Identities=16% Similarity=0.203 Sum_probs=66.1
Q ss_pred cccHHHHHHHhHHHhc-------CCcchhhhcCCCchHHHhhHhhcCCcccee-ccCCCHHHHHHHHHHHHhhhhhhhhc
Q psy12631 14 NLSRHDMLHWVNDTLQ-------SSFGKIEELCSGAAYCQFMDMLFPGLYSIF-ILRNLLHTFVLHLILKAQQDSKNRRA 85 (185)
Q Consensus 14 ~~SR~ELL~WiN~~L~-------~~~tKIEel~tGAaYCQlmD~lfPg~Ipmk-Fna~~e~E~i~NfKlLQ~af~Kn~i~ 85 (185)
...+..||.|+|..++ .|++ ....+|-|+|-|++.+.|+.|++. ..+. +-.+|++.. |+
T Consensus 6 ~~~~~~LL~W~q~~~~~y~~v~v~nFs--~sw~dG~af~aLih~~~P~lid~~~l~~~---~~~~n~~~a---f~----- 72 (116)
T 1wyl_A 6 SGTQEELLRWCQEQTAGYPGVHVSDLS--SSWADGLALCALVYRLQPGLLEPSELQGL---GALEATAWA---LK----- 72 (116)
T ss_dssp SSSHHHHHHHHHHHHHHSTTCCCSCTT--TTTTSSHHHHHHHHHHCTTSCCCSSGGGC---CHHHHHHHH---HH-----
T ss_pred CCHHHHHHHHHHHHhccCCCCCCCCcc--ccccccHHHHHHHHHHCcCCCCHHHhccC---CHHHHHHHH---HH-----
Confidence 3445779999999875 2233 246789999999999999999865 5443 455666654 33
Q ss_pred cCCCccccchhhhhhHHHHhh-hccccccchhhhhcccccchHHHHHHHHHHHHH
Q psy12631 86 KGYGYLGIWTAWHFVAVIYHR-IRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVA 139 (185)
Q Consensus 86 k~~~~~~~~~~~~~v~~~f~r-~~i~~~ipV~kLvkg~~qDNleflqW~k~f~da 139 (185)
+.++ +||++-++.+.++.+ .|-.-.+-.+..||..
T Consensus 73 -----------------~Ae~~lgi~~lL~peD~~~~--~d~ksv~tYvs~l~~~ 108 (116)
T 1wyl_A 73 -----------------VAENELGITPVVSAQAVVAG--SDPLGLIAYLSHFHSA 108 (116)
T ss_dssp -----------------HHHHTTCCCCCSCHHHHHHT--SCHHHHHHHHHHHHHH
T ss_pred -----------------HHHHHcCCccccCHHHHhcC--CchhHHHHHHHHHHHH
Confidence 1234 788888999999887 5666666666666554
No 14
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=97.93 E-value=1.2e-05 Score=60.23 Aligned_cols=70 Identities=11% Similarity=0.164 Sum_probs=58.0
Q ss_pred HHHHHHHhHHHhcCCcch--hhhcCCCchHHHhhHhhcCCccceec-cCCCHHHHHHHHHHHHhhhhhhhhccC
Q psy12631 17 RHDMLHWVNDTLQSSFGK--IEELCSGAAYCQFMDMLFPGLYSIFI-LRNLLHTFVLHLILKAQQDSKNRRAKG 87 (185)
Q Consensus 17 R~ELL~WiN~~L~~~~tK--IEel~tGAaYCQlmD~lfPg~IpmkF-na~~e~E~i~NfKlLQ~af~Kn~i~k~ 87 (185)
+.|+..||++.|+.++.. .|.|.+|+..|++++.+.||+|+ ++ .+...+....|...+-++.++.|+++.
T Consensus 5 e~e~~~WIe~~l~~~~~~~l~~~L~dGvvLCkL~N~l~P~~v~-ki~~~~~~f~~~eNI~~Fl~a~~~~Gv~~~ 77 (108)
T 1h67_A 5 ERQLRVWIEGATGRRIGDNFMDGLKDGVILCELINKLQPGSVQ-KVNDPVQNWHKLENIGNFLRAIKHYGVKPH 77 (108)
T ss_dssp SHHHHHHHHHHHSCCCCSCHHHHHHHCSHHHHHHHHHSTTSST-TCCCTTSSHHHHHHHHHHHHHHHHHTSCGG
T ss_pred HHHHHHHHHHHhCCCCcHHHHHHHccHHHHHHHHHHhCCCCcc-cccccccchHHHHHHHHHHHHHHHcCCCcc
Confidence 478999999999988743 57799999999999999999998 53 355668888999998888877777653
No 15
>2yrn_A Neuron navigator 2 isoform 4; calponin homolgy domain, helicase, all alpha, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.90 E-value=2.3e-05 Score=59.90 Aligned_cols=98 Identities=10% Similarity=-0.044 Sum_probs=72.3
Q ss_pred HHHHHHHhHHHhcCC-----cch-hhhcCCCchHHHhhHhhcCCccceecc--CCCHHHHHHHHHHHHhhhhhhhhccCC
Q psy12631 17 RHDMLHWVNDTLQSS-----FGK-IEELCSGAAYCQFMDMLFPGLYSIFIL--RNLLHTFVLHLILKAQQDSKNRRAKGY 88 (185)
Q Consensus 17 R~ELL~WiN~~L~~~-----~tK-IEel~tGAaYCQlmD~lfPg~IpmkFn--a~~e~E~i~NfKlLQ~af~Kn~i~k~~ 88 (185)
++++..|||+.|... ++. .|+|.+|...|+|++.+-|+.++ +++ |......++|....-+++++.|+..
T Consensus 20 ~~~f~~WIN~~L~~~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~l~-~~~~~p~~~~~~~eNv~~aL~~~~~~gv~~-- 96 (129)
T 2yrn_A 20 KRIYTDWANHYLAKSGHKRLIRDLQQDVTDGVLLAQIIQVVANEKIE-DINGCPKNRSQMIENIDACLNFLAAKGINI-- 96 (129)
T ss_dssp HHHHHHHHHHHHHHTCCCSCCSCHHHHSSSSHHHHHHHHHHTTCCCT-TCCSSCCSTTHHHHHHHHHHHHHHHHTCCC--
T ss_pred HHHHHHHHHHHhcccCCCccchhHHHHcccHHHHHHHHHHHhcCCcc-cccCCCCcHHHHHHHHHHHHHHHHHhCCcc--
Confidence 457999999988643 333 37899999999999999999988 653 6788899999999888766554432
Q ss_pred CccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHHH
Q psy12631 89 GYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVA 139 (185)
Q Consensus 89 ~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~da 139 (185)
..|-.+.++.|...--+-++--+-.||.+
T Consensus 97 ----------------------~~i~~~DI~dgn~~~iL~Llw~L~r~~q~ 125 (129)
T 2yrn_A 97 ----------------------QGLSAEEIRNGNLKAILGLFFSLSRYKQQ 125 (129)
T ss_dssp ----------------------TTCCHHHHHHTCHHHHHHHHHHHHHHHSS
T ss_pred ----------------------cCCChhhhhcCCHhHHHHHHHHHHHHHhh
Confidence 14667788888777667766444455443
No 16
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=97.90 E-value=3.7e-05 Score=60.40 Aligned_cols=75 Identities=9% Similarity=0.100 Sum_probs=61.7
Q ss_pred CcccHHHHHHHhHHHhcCCcc--------hhhhcCCCchHHHhhHhhcC---Cccceecc-CCCHHHHHHHHHHHHhhhh
Q psy12631 13 ENLSRHDMLHWVNDTLQSSFG--------KIEELCSGAAYCQFMDMLFP---GLYSIFIL-RNLLHTFVLHLILKAQQDS 80 (185)
Q Consensus 13 ~~~SR~ELL~WiN~~L~~~~t--------KIEel~tGAaYCQlmD~lfP---g~IpmkFn-a~~e~E~i~NfKlLQ~af~ 80 (185)
+..-..|+..||++.|+.++. =.|.|.+|+..|+|++.+.| |+|+++++ ++..+.+..|...+-++.+
T Consensus 7 ~~~~e~e~~~WIe~~l~~~l~~~~~~~~~f~~~LkDGvvLCkL~N~l~P~~~~~I~~kin~~~~~f~~~eNI~~FL~ac~ 86 (144)
T 1ujo_A 7 GEELEERLVEWIVVQCGPDVGRPDRGRLGFQVWLKNGVILSKLVNSLYPEGSKPVKVPENPPSMVFKQMEQVAQFLKAAE 86 (144)
T ss_dssp CCHHHHHHHHHHHHHHCTTTCCCCSSSSSHHHHTTSSHHHHHHHHHHSCTTTCCSCCCSSCCCSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCCCcCCcHHHHHHHHcchHHHHHHHHHhCcccCCCcceeecCCCchhHHHHHHHHHHHHHH
Confidence 444568999999999998875 24569999999999999999 89987754 5577889999999988888
Q ss_pred hhhhccC
Q psy12631 81 KNRRAKG 87 (185)
Q Consensus 81 Kn~i~k~ 87 (185)
+.|+++.
T Consensus 87 ~~Gv~~~ 93 (144)
T 1ujo_A 87 DYGVIKT 93 (144)
T ss_dssp HHTCCSS
T ss_pred HcCcCcc
Confidence 7777653
No 17
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=97.83 E-value=7.3e-05 Score=63.02 Aligned_cols=94 Identities=13% Similarity=0.202 Sum_probs=63.1
Q ss_pred cHHHHHHHhHHHhcCCcc--hhh----hcCCCchHHHhhHhhcCCccceeccCCCHHHHHHHHHHHHhhhhhhhhccCCC
Q psy12631 16 SRHDMLHWVNDTLQSSFG--KIE----ELCSGAAYCQFMDMLFPGLYSIFILRNLLHTFVLHLILKAQQDSKNRRAKGYG 89 (185)
Q Consensus 16 SR~ELL~WiN~~L~~~~t--KIE----el~tGAaYCQlmD~lfPg~IpmkFna~~e~E~i~NfKlLQ~af~Kn~i~k~~~ 89 (185)
.+..||.|+|..+. .|+ +|+ +..+|.|||.|++.+.|+.|++. .-.+.+-.+|.+..-++
T Consensus 141 ~~~~LL~W~~~~~~-~y~~v~v~nFs~s~~DG~a~~aLi~~~~P~~id~~--~l~~~~~~~n~~~a~~~----------- 206 (254)
T 1wku_A 141 AKEGLLLWCQRKTA-PYRNVNVQNFHTSWKDGLALCALIHRHRPDLIDYA--KLRKDDPIGNLNTAFEV----------- 206 (254)
T ss_dssp HHHHHHHHHHHHHT-TCTTCCCCSSSGGGTTSHHHHHHHHHHCTTSCCGG--GCCTTCHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHHHHcc-CCCCCcCCCCccchhhHHHHHHHHHHHCCCccccc--ccCcCCHHHHHHHHHHH-----------
Confidence 45679999998774 222 232 57899999999999999999854 33334567776654332
Q ss_pred ccccchhhhhhHHHHh-hhccccccchhhhhcccccchHHHHHHHHHHH
Q psy12631 90 YLGIWTAWHFVAVIYH-RIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHF 137 (185)
Q Consensus 90 ~~~~~~~~~~v~~~f~-r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~ 137 (185)
.+ .+||++.+..+.++.+.-.|-.-.+-.+..||
T Consensus 207 --------------A~~~lGi~~~l~peDiv~~~~pD~k~imtyva~l~ 241 (254)
T 1wku_A 207 --------------AEKYLDIPKMLDAEDIVNTPKPDEKAIMTYVSCFY 241 (254)
T ss_dssp --------------HHHHSCCCCCSCHHHHHHSSSCCHHHHHHHHHHHH
T ss_pred --------------HHHHcCCCCcCCHHHHhccCCCcHHHHHHHHHHHH
Confidence 23 37888889999998876554443333333333
No 18
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=97.81 E-value=4.7e-05 Score=59.97 Aligned_cols=70 Identities=17% Similarity=0.167 Sum_probs=57.9
Q ss_pred HHHHHHHhHHHhcCCcch--hhhcCCCchHHHhhHhhcCCccceec-cCCCHHHHHHHHHHHHhhhhhhhhccC
Q psy12631 17 RHDMLHWVNDTLQSSFGK--IEELCSGAAYCQFMDMLFPGLYSIFI-LRNLLHTFVLHLILKAQQDSKNRRAKG 87 (185)
Q Consensus 17 R~ELL~WiN~~L~~~~tK--IEel~tGAaYCQlmD~lfPg~IpmkF-na~~e~E~i~NfKlLQ~af~Kn~i~k~ 87 (185)
..|+..||++.|..++.. .+.|.+|+..|+|++.+.||+|+ ++ .+...+....|...+-++.++.|+++.
T Consensus 19 ~~e~~~WIe~~l~~~i~~~l~~~L~DGvvLCkL~N~l~P~~v~-kin~~~~~f~~~eNI~~FL~a~~~~Gv~~~ 91 (146)
T 1wyn_A 19 EAELRTWIEGLTGLSIGPDFQKGLKDGTILCTLMNKLQPGSVP-KINRSMQNWHQLENLSNFIKAMVSYGMNPV 91 (146)
T ss_dssp HHHHHHHHHHHHCCCCCSCHHHHHHTTSHHHHHHHHHCTTSCS-CCCCSSCHHHHHHHHHHHHHHHHHHTCCSS
T ss_pred HHHHHHHHHHHhCCCCcHHHHHHHccHHHHHHHHHHhCCCCcc-ccccccccccHHHHHHHHHHHHHHcCCCcc
Confidence 489999999999988742 56699999999999999999996 43 456778889999999888777776653
No 19
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=97.77 E-value=4.3e-05 Score=59.50 Aligned_cols=69 Identities=16% Similarity=0.265 Sum_probs=57.1
Q ss_pred HHHHHHHhHHHhcCCcch--hhhcCCCchHHHhhHhhcCCccceec-cCCCHHHHHHHHHHHHhhhhhhhhcc
Q psy12631 17 RHDMLHWVNDTLQSSFGK--IEELCSGAAYCQFMDMLFPGLYSIFI-LRNLLHTFVLHLILKAQQDSKNRRAK 86 (185)
Q Consensus 17 R~ELL~WiN~~L~~~~tK--IEel~tGAaYCQlmD~lfPg~IpmkF-na~~e~E~i~NfKlLQ~af~Kn~i~k 86 (185)
..|+..||++.|+.++.. .|.|.+|+..|++++.+.||+|+ ++ .+...+....|...+-++.++.|++.
T Consensus 19 ~~e~~~WIe~~l~~~~~~~l~~~L~DGvvLCkL~N~l~P~~v~-ki~~~~~~f~~~eNI~~Fl~a~~~~Gv~~ 90 (136)
T 1wyp_A 19 EQELREWIEGVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVK-KINESTQNWHQLENIGNFIKAITKYGVKP 90 (136)
T ss_dssp HHHHHHHHHHHTCCCCCSCTTHHHHTSHHHHHHHHHHSTTSSS-CCCCSSCSHHHHHHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHhCCCCcHHHHHHHccHHhHHHHHHhhCCCCcc-cccccccchHHHHHHHHHHHHHHHcCCCc
Confidence 479999999999988742 56699999999999999999996 43 35567888899999888877777664
No 20
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=97.76 E-value=2.7e-05 Score=64.21 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=57.0
Q ss_pred cHHHHHHHhHHHhcCCcch----hhhcCCCchHHHhhHhhcCCcccee-c---------cCCCHHHHHHHHHHHHhhhhh
Q psy12631 16 SRHDMLHWVNDTLQSSFGK----IEELCSGAAYCQFMDMLFPGLYSIF-I---------LRNLLHTFVLHLILKAQQDSK 81 (185)
Q Consensus 16 SR~ELL~WiN~~L~~~~tK----IEel~tGAaYCQlmD~lfPg~Ipmk-F---------na~~e~E~i~NfKlLQ~af~K 81 (185)
.+.|+..||++.|+.++.. .|.|.+|+.-|++++.|.||+||++ . .++..+.+..|...+-++.++
T Consensus 48 ~~~e~~~WIe~~lg~~l~~~~~l~~~LrdGvvLCkL~N~l~Pg~vp~kkI~~~~~~~~~~~~~~F~~~eNI~~FL~ac~~ 127 (193)
T 3i6x_A 48 HLEEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMDE 127 (193)
T ss_dssp HHHHHHHHHHHHHSSCCCCGGGHHHHHTTSHHHHHHHHHHCTTTCCGGGSTTTTCHHHHHSCCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCChHHHHHHhccHHHHHHHHHHHCCCCCCccccCCcccccccCcccchHHHHHHHHHHHHHHH
Confidence 3468999999999998864 4668999999999999999999864 3 245667778888887777777
Q ss_pred hhhcc
Q psy12631 82 NRRAK 86 (185)
Q Consensus 82 n~i~k 86 (185)
.|++.
T Consensus 128 ~Gvp~ 132 (193)
T 3i6x_A 128 IGLPK 132 (193)
T ss_dssp HTCCG
T ss_pred cCCCc
Confidence 77665
No 21
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=97.69 E-value=5.7e-05 Score=60.19 Aligned_cols=72 Identities=10% Similarity=0.108 Sum_probs=59.6
Q ss_pred cHHHHHHHhHHHhcCCcch----hhhcCCCchHHHhhHhhcCCccceecc-CCCHHHHHHHHHHHHhhhhhhhhccC
Q psy12631 16 SRHDMLHWVNDTLQSSFGK----IEELCSGAAYCQFMDMLFPGLYSIFIL-RNLLHTFVLHLILKAQQDSKNRRAKG 87 (185)
Q Consensus 16 SR~ELL~WiN~~L~~~~tK----IEel~tGAaYCQlmD~lfPg~IpmkFn-a~~e~E~i~NfKlLQ~af~Kn~i~k~ 87 (185)
.+.|+..||++.|+.++.. .|.|.+|+..|++++.+.||+|+-=.. +...+.+..|...+-++.++.|+++.
T Consensus 12 ~~~e~~~WIe~~l~~~l~~~~~l~~~LkdGvvLCkL~N~l~P~~i~kI~~~~~~~f~~~eNI~~FL~a~~~~Gv~~~ 88 (159)
T 1p2x_A 12 RVDEAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKLIKIFYSNELQFRHSDNINKFLDFIHGIGLPEI 88 (159)
T ss_dssp HHHHHHHHHHHHHTSCCCCGGGHHHHTTTSHHHHHHHHHHCTTSCCCCCCCSSCCTTHHHHHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHhCCCCCChHHHHHHHcchHHHHHHHHHhCCCCccccccccCCcchHHHHHHHHHHHHHHcCCCcc
Confidence 3578999999999988864 456999999999999999999852133 46778899999999888888888764
No 22
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=97.67 E-value=8.4e-05 Score=59.00 Aligned_cols=70 Identities=13% Similarity=0.296 Sum_probs=58.4
Q ss_pred HHHHHHHhHHHhcCCcch--------hhhcCCCchHHHhhHhhcC---Cccceec-cCCCHHHHHHHHHHHHhhhhhhhh
Q psy12631 17 RHDMLHWVNDTLQSSFGK--------IEELCSGAAYCQFMDMLFP---GLYSIFI-LRNLLHTFVLHLILKAQQDSKNRR 84 (185)
Q Consensus 17 R~ELL~WiN~~L~~~~tK--------IEel~tGAaYCQlmD~lfP---g~IpmkF-na~~e~E~i~NfKlLQ~af~Kn~i 84 (185)
..|+..||++.|+.++.. .|.|.+|+..|+|++.+.| |+|+ ++ .++..+.+..|...+-++.++.|+
T Consensus 19 e~e~~~WIe~~l~~~l~~~~~~~~~~~~~LkDGvvLCkL~N~l~P~~~~~i~-kIn~~~~~F~~~eNI~~FL~ac~~~Gv 97 (155)
T 1wym_A 19 EQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINALYPEGQAPVK-KIQASTMAFKQMEQISQFLQAAERYGI 97 (155)
T ss_dssp HHHHHHHHHHHSSSCCCCCCSSHHHHHHHHHTSHHHHHHHHHHSCTTTCSCC-CCCCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCCCCcccHHHHHHHHcchHHHHHHHHHhccccCCCcC-cccCCCccccHHHHHHHHHHHHHHcCC
Confidence 468999999999998753 4569999999999999999 9998 64 356788899999998888777776
Q ss_pred ccC
Q psy12631 85 AKG 87 (185)
Q Consensus 85 ~k~ 87 (185)
+..
T Consensus 98 ~~~ 100 (155)
T 1wym_A 98 NTT 100 (155)
T ss_dssp CTT
T ss_pred Ccc
Confidence 653
No 23
>2ee7_A Sperm flagellar protein 1; all alpha protein, CH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.59 E-value=0.00042 Score=54.07 Aligned_cols=102 Identities=11% Similarity=0.090 Sum_probs=78.4
Q ss_pred CcccHHHHHHHhHHHhcCCcch--h-hhcCCCchHHHhhHhhcCCcccee-c-cCCCHHHHHHHHHHHH-hhhhhhhhcc
Q psy12631 13 ENLSRHDMLHWVNDTLQSSFGK--I-EELCSGAAYCQFMDMLFPGLYSIF-I-LRNLLHTFVLHLILKA-QQDSKNRRAK 86 (185)
Q Consensus 13 ~~~SR~ELL~WiN~~L~~~~tK--I-Eel~tGAaYCQlmD~lfPg~Ipmk-F-na~~e~E~i~NfKlLQ-~af~Kn~i~k 86 (185)
+..-++||+.||++ ++++..+ + .++++|...-.|+...||..|.|+ | +++.-..-+.||..|. .+|+|+|+.
T Consensus 13 ~~ee~~el~~WL~~-l~Ls~~~rn~rRDFSdG~lvAEIl~~y~Pk~Vdlh~y~~~~S~~~K~~NW~~ln~kvl~kl~~~- 90 (127)
T 2ee7_A 13 DEEALHQLYLWVDN-IPLSRPKRNLSRDFSDGVLVAEVIKFYFPKMVEMHNYVPANSLQQKLSNWGHLNRKVLKRLNFS- 90 (127)
T ss_dssp CHHHHHHHHHHHHH-SCCSCCSSCHHHHHTTSHHHHHHHHHHCTTTCCCSSCCCCSSHHHHHHHHHHHHHHTTGGGTCC-
T ss_pred CHHHHHHHHHHHHc-CCCCCCCCchhhhccchhHHHHHHHHHCcCcccccccCCCCcHHHHHHhHHHHHHHHHHHcCCC-
Confidence 34457899999995 8888752 3 569999999999999999999998 6 4566677999999995 788777653
Q ss_pred CCCccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHHH
Q psy12631 87 GYGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVA 139 (185)
Q Consensus 87 ~~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~da 139 (185)
++ .-.++.++.|+-..=-.++.=++.+...
T Consensus 91 ----------------------l~-~~~i~~i~~~~~Gaie~lL~~L~~~l~~ 120 (127)
T 2ee7_A 91 ----------------------VP-DDVMRKIAQCAPGVVELVLIPLRQRLEE 120 (127)
T ss_dssp ----------------------CC-HHHHHHHHTTCTTTTHHHHHHHHHHHHH
T ss_pred ----------------------CC-HHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 11 2467889998876666677766666554
No 24
>1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=97.51 E-value=0.00021 Score=54.69 Aligned_cols=71 Identities=11% Similarity=0.130 Sum_probs=55.1
Q ss_pred CCcccHHHHHHHhHHHhcCCc-------c-h--hhhcCCCchHHHhhHhhcCCccceec--cCCCHHHHHHHHHHHHhhh
Q psy12631 12 SENLSRHDMLHWVNDTLQSSF-------G-K--IEELCSGAAYCQFMDMLFPGLYSIFI--LRNLLHTFVLHLILKAQQD 79 (185)
Q Consensus 12 ~~~~SR~ELL~WiN~~L~~~~-------t-K--IEel~tGAaYCQlmD~lfPg~IpmkF--na~~e~E~i~NfKlLQ~af 79 (185)
+..-.+.|+..|||+++.++. + . .|.|.+|+.-|++++.+.||+|+ ++ .+...+.+..|...+-++.
T Consensus 3 ~~~~~e~e~~~WI~~~~~l~~~~~~~~~~~~~l~~~L~dGvvLCkL~N~l~Pg~i~-ki~~~~~~~f~~~eNI~~FL~a~ 81 (121)
T 1wyr_A 3 SGSSGEEQIVTWLISLGVLESPKKTICDPEEFLKSSLKNGVVLCKLINRLMPGSVE-KFCLDPQTEADCINNINDFLKGC 81 (121)
T ss_dssp CSCCSHHHHHHHHHHHTSSCCCSSCCSCHHHHHHHHHHHSHHHHHHHHHHSTTCCS-CCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhcCcCCcccCCCCcHHHHHHHHccHHHHHHHHHHhCCCCCC-cCCCCCcchHHHHHHHHHHHHHH
Confidence 345567899999999965432 1 1 37799999999999999999999 64 3456788999999988876
Q ss_pred hhhh
Q psy12631 80 SKNR 83 (185)
Q Consensus 80 ~Kn~ 83 (185)
++.|
T Consensus 82 ~~~g 85 (121)
T 1wyr_A 82 ATLQ 85 (121)
T ss_dssp HHHT
T ss_pred HHcC
Confidence 6544
No 25
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=97.44 E-value=0.0005 Score=62.75 Aligned_cols=99 Identities=14% Similarity=0.221 Sum_probs=71.9
Q ss_pred CcccHHHHHHHhHHHhcC-----Ccchhh--hcCCCchHHHhhHhhcCCcccee-ccC-CCHHHHHHHHHHHHhhhhhhh
Q psy12631 13 ENLSRHDMLHWVNDTLQS-----SFGKIE--ELCSGAAYCQFMDMLFPGLYSIF-ILR-NLLHTFVLHLILKAQQDSKNR 83 (185)
Q Consensus 13 ~~~SR~ELL~WiN~~L~~-----~~tKIE--el~tGAaYCQlmD~lfPg~Ipmk-Fna-~~e~E~i~NfKlLQ~af~Kn~ 83 (185)
...+..+||.|+|..++. +++... ...+|-|+|-|++.+.|+.++++ +.+ .++.+..+|.+..=++
T Consensus 395 ~~~~~~~LL~W~~~~~~~~~~~~~i~nF~d~s~~dG~a~~aLi~~~~P~li~~~~l~~~~s~~~~~~N~~~a~~~----- 469 (506)
T 1pxy_A 395 KEMTDADILSWANRKVRTMGRKLQIESFKDKSLSSGLFFLNLLWAVEPRVVNWNLVTKGETDDEKRLNATYIVSV----- 469 (506)
T ss_dssp -CCCHHHHHHHHHHHHHTTTCCCCCSSTTCGGGGGCHHHHHHHHHHCGGGCCTTSCCCSCSHHHHHHHHHHHHHH-----
T ss_pred ccccHHHHHHHHHHHhhhcCCccccCCCCcccccchHHHHHHHHhhCCCeeehhhcccCCCchhHHHHHHHHHHH-----
Confidence 445788999999998863 444443 67799999999999999999877 554 4667889998874332
Q ss_pred hccCCCccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHHH
Q psy12631 84 RAKGYGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVA 139 (185)
Q Consensus 84 i~k~~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~da 139 (185)
.+++||++.++.+.++.+ |-.-.+-.+..||..
T Consensus 470 --------------------a~~lGi~~~l~peDi~~~---d~ksi~tyv~~l~~~ 502 (506)
T 1pxy_A 470 --------------------ARKLGCSVFLLPEDIVEV---NQKMILILTASIMYW 502 (506)
T ss_dssp --------------------HHHHTCCCCCCHHHHHTT---CHHHHHHHHHHHHHH
T ss_pred --------------------HHHcCCCCcCCHHHccCC---ChhHHHHHHHHHHHH
Confidence 246777778888888876 656666555555544
No 26
>1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=97.42 E-value=0.00016 Score=60.01 Aligned_cols=72 Identities=10% Similarity=0.099 Sum_probs=57.4
Q ss_pred cHHHHHHHhHHHhcCCcch----hhhcCCCchHHHhhHhhcCCccceec-cCCCHHHHHHHHHHHHhhhhhhhhccC
Q psy12631 16 SRHDMLHWVNDTLQSSFGK----IEELCSGAAYCQFMDMLFPGLYSIFI-LRNLLHTFVLHLILKAQQDSKNRRAKG 87 (185)
Q Consensus 16 SR~ELL~WiN~~L~~~~tK----IEel~tGAaYCQlmD~lfPg~IpmkF-na~~e~E~i~NfKlLQ~af~Kn~i~k~ 87 (185)
.+.|+..||++.|..++.. .|.|.+|+..|+|++.+.||+|+-=+ .++..+.+..|...+-++.++.|++..
T Consensus 56 ~~~e~~~WIe~~l~~~l~~~~~f~~~LrDGvvLCkLiN~l~P~sv~kI~~~s~~~f~~~eNI~~FL~ac~~~Gvp~~ 132 (203)
T 1p5s_A 56 RVDEAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKLIKIFYSNELQFRHSDNINKFLDFIHGIGLPEI 132 (203)
T ss_dssp HHHHHHHHHHHHHTSCCCCGGGHHHHHTTSHHHHHHHHHHCTTSCCCCCCCSSSCCCHHHHHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHhCCCCCChHHHHHHHcchHHHHHHHHHhCCCCcccccCCCCCcchHHHHHHHHHHHHHHcCCCcc
Confidence 4588999999999988763 45699999999999999999985213 345667888899888888777776653
No 27
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=97.42 E-value=0.00046 Score=57.60 Aligned_cols=95 Identities=14% Similarity=0.153 Sum_probs=65.5
Q ss_pred cHHHHHHHhHHHhc----CCcchhhhcCCCchHHHhhHhhcCCccceeccCCCHHHHHHHHHHHHhhhhhhhhccCCCcc
Q psy12631 16 SRHDMLHWVNDTLQ----SSFGKIEELCSGAAYCQFMDMLFPGLYSIFILRNLLHTFVLHLILKAQQDSKNRRAKGYGYL 91 (185)
Q Consensus 16 SR~ELL~WiN~~L~----~~~tKIEel~tGAaYCQlmD~lfPg~IpmkFna~~e~E~i~NfKlLQ~af~Kn~i~k~~~~~ 91 (185)
.+..||.|+|..+. .|++. +..+|-|||-|++.+.|+.+| .|.+-.+.+-++|.+.. |+
T Consensus 144 ~~~~LL~W~~~~~~~~~v~nFs~--s~~dG~a~~aLi~~~~P~~i~-~~~~l~~~~~~~n~~~a---~~----------- 206 (245)
T 2wa7_A 144 PKQRLLGWIQNKIPYLPITNFNQ--NWQDGKALGALVDSCAPGLCP-DWESWDPQKPVDNAREA---VQ----------- 206 (245)
T ss_dssp HHHHHHHHHHHHSTTSCCCCSSG--GGTTSHHHHHHHHHHSTTSST-TGGGSCTTCHHHHHHHH---HH-----------
T ss_pred HHHHHHHHHHHhCCCCCCCCCcc--cchhhHHHHHHHHHHCccccc-cccccCcccHHHHHHHH---HH-----------
Confidence 36889999999876 23333 678999999999999999883 13333344567776654 32
Q ss_pred ccchhhhhhHHHHhh-hccccccchhhhhcccccchHHHHHHHHHHHHH
Q psy12631 92 GIWTAWHFVAVIYHR-IRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVA 139 (185)
Q Consensus 92 ~~~~~~~~v~~~f~r-~~i~~~ipV~kLvkg~~qDNleflqW~k~f~da 139 (185)
+-++ +||++.+..+.++.+. .|-.-.+-.+..||.+
T Consensus 207 -----------~A~~~lGi~~~l~peDi~~~~-~d~ksi~tyvs~~~~~ 243 (245)
T 2wa7_A 207 -----------QADDWLGVPQVITPEEIIHPD-VDEHSVMTYLSQFPKA 243 (245)
T ss_dssp -----------HHHHHSCCCCSSCHHHHTCTT-CCHHHHHHHHTHHHHC
T ss_pred -----------HHHHhCCCCccCCHHHhccCC-CcHHHHHHHHHHHhcc
Confidence 1233 7888889999988854 4556666666555543
No 28
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=97.41 E-value=0.00015 Score=60.34 Aligned_cols=81 Identities=11% Similarity=0.199 Sum_probs=56.2
Q ss_pred cccHH-HHHHHhHHHhcCCc--chhh----hcCCCchHHHhhHhhcCCcccee-ccCCCHHHHHHHHHHHHhhhhhhhhc
Q psy12631 14 NLSRH-DMLHWVNDTLQSSF--GKIE----ELCSGAAYCQFMDMLFPGLYSIF-ILRNLLHTFVLHLILKAQQDSKNRRA 85 (185)
Q Consensus 14 ~~SR~-ELL~WiN~~L~~~~--tKIE----el~tGAaYCQlmD~lfPg~Ipmk-Fna~~e~E~i~NfKlLQ~af~Kn~i~ 85 (185)
..|-. .||.|+|..+.. | .+|+ +..+|.|+|.|++.+.|+.+|+. ..+ .+..+|.+..-+..+
T Consensus 131 ~~~~~~~LL~W~~~~~~~-~~~~~v~nF~~s~~DG~a~~aLi~~~~P~~i~~~~l~~---~~~~~n~~~a~~~a~----- 201 (245)
T 1sh5_A 131 DMTAKEKLLLWSQRMVEG-YQGLRCDNFTTSWRDGRLFNAIIHRHKPMLIDMNKVYR---QTNLENLDQAFSVAE----- 201 (245)
T ss_dssp SCCHHHHHHHHHHHHTTT-STTCCCCCSSGGGTTSHHHHHHHHTTCTTTCCHHHHHH---SCHHHHHHHHHHHHH-----
T ss_pred cCCHHHHHHHHHHHHhcc-CCCcccCCccccccchHHHHHHHHHHCCCCCCHHHccc---CCHHHHHHHHHHHHH-----
Confidence 34444 599999998874 2 1343 47899999999999999999875 433 345677766543321
Q ss_pred cCCCccccchhhhhhHHHHhhhccccccchhhhhccc
Q psy12631 86 KGYGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLG 122 (185)
Q Consensus 86 k~~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~ 122 (185)
..+||++.+..+.++.++
T Consensus 202 -------------------~~lGi~~~l~peDi~~~~ 219 (245)
T 1sh5_A 202 -------------------RDLGVTRLLDPEDVDVPQ 219 (245)
T ss_dssp -------------------HHHCCCCCCCHHHHSSSS
T ss_pred -------------------HhCCCCccCCHHHhccCC
Confidence 137777788888877554
No 29
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=97.38 E-value=0.00067 Score=62.14 Aligned_cols=85 Identities=11% Similarity=0.155 Sum_probs=64.0
Q ss_pred CcccHHHHHHHhHHHhcC-----Ccchhh--hcCCCchHHHhhHhhcCCcccee-ccC-CCHHHHHHHHHHHHhhhhhhh
Q psy12631 13 ENLSRHDMLHWVNDTLQS-----SFGKIE--ELCSGAAYCQFMDMLFPGLYSIF-ILR-NLLHTFVLHLILKAQQDSKNR 83 (185)
Q Consensus 13 ~~~SR~ELL~WiN~~L~~-----~~tKIE--el~tGAaYCQlmD~lfPg~Ipmk-Fna-~~e~E~i~NfKlLQ~af~Kn~ 83 (185)
...|..+||.|+|..+.. +++... ...+|-|+|-|++.+.|+.|++. ..+ .++.+-.+|.+..=++
T Consensus 406 ~~~~~~~LL~W~~~~~~~~~~~~~i~nF~~~s~~dG~a~~aLi~~~~P~~i~~~~l~~~~~~~~~~~n~~~af~~----- 480 (513)
T 1rt8_A 406 KTLSDSDMVAWANSMAAKGGKGSQIRSFRDPSISTGVFVLDVLHGIKSEYVDYNLVTDGSTEELAIQNARLAISI----- 480 (513)
T ss_dssp -CCCHHHHHHHHHHHHTTTCSSCCCSSTTCGGGGGSHHHHHHHHHHCGGGCCGGGCCCCCSHHHHHHHHHHHHHH-----
T ss_pred CcCCHHHHHHHHHHHhhccCCCCCCCCCCcccccchHHHHHHHHHhCCCcCCHHhhccccChhhHHHHHHHHHHH-----
Confidence 456778899999998864 344444 47789999999999999999977 444 4677888888864332
Q ss_pred hccCCCccccchhhhhhHHHHhhhccccccchhhhhccc
Q psy12631 84 RAKGYGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLG 122 (185)
Q Consensus 84 i~k~~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~ 122 (185)
-+++||++.++.+.++.++
T Consensus 481 --------------------A~~lGi~~~l~peDi~~~~ 499 (513)
T 1rt8_A 481 --------------------ARKLGAVIFILPEDIVAVR 499 (513)
T ss_dssp --------------------HHHTTCCCCCCHHHHHTTC
T ss_pred --------------------HHHcCCCccCCHHHhcCCC
Confidence 2467777788888888876
No 30
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens}
Probab=97.37 E-value=0.00033 Score=54.12 Aligned_cols=69 Identities=14% Similarity=0.169 Sum_probs=53.8
Q ss_pred CCcccHHHHHHHhHHHhc--CC------cch-h-hhcCCCchHHHhhHhhcCCccceec--cCCCHHHHHHHHHHHHhhh
Q psy12631 12 SENLSRHDMLHWVNDTLQ--SS------FGK-I-EELCSGAAYCQFMDMLFPGLYSIFI--LRNLLHTFVLHLILKAQQD 79 (185)
Q Consensus 12 ~~~~SR~ELL~WiN~~L~--~~------~tK-I-Eel~tGAaYCQlmD~lfPg~IpmkF--na~~e~E~i~NfKlLQ~af 79 (185)
+.-..+.|+..||++++. .+ -.. + |.|.+|+.-|++++.+.||+|| +. .+...+.+..|...+.++.
T Consensus 9 ~~~~~~~e~~~WI~~~~~L~~~~~~~~~~~~~l~~~LkdGvvLCkLiN~l~Pg~i~-kI~~~~~~~f~~~eNI~~FL~a~ 87 (126)
T 2l3g_A 9 SHMNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIE-KVYPEPRSESECLSNIREFLRGC 87 (126)
T ss_dssp CCCCHHHHHHHHHHHTTSSCCCSSCCSCHHHHHHHHHTTSHHHHHHHHHHSTTCCS-CCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCccccCCCCCChhhHHHHHHccHHHHHHHHHHhCCCCCC-ccCCCCCcchHHHHHHHHHHHHH
Confidence 345667999999999843 31 112 3 8899999999999999999999 64 3455789999999988886
Q ss_pred hh
Q psy12631 80 SK 81 (185)
Q Consensus 80 ~K 81 (185)
++
T Consensus 88 ~~ 89 (126)
T 2l3g_A 88 GA 89 (126)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 31
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens}
Probab=97.34 E-value=0.00018 Score=58.82 Aligned_cols=71 Identities=14% Similarity=0.123 Sum_probs=56.3
Q ss_pred HHHHHHHhHHHhcCCcch----hhhcCCCchHHHhhHhhcCCcccee--c-------c-CCCHHHHHHHHHHHHhhhhhh
Q psy12631 17 RHDMLHWVNDTLQSSFGK----IEELCSGAAYCQFMDMLFPGLYSIF--I-------L-RNLLHTFVLHLILKAQQDSKN 82 (185)
Q Consensus 17 R~ELL~WiN~~L~~~~tK----IEel~tGAaYCQlmD~lfPg~Ipmk--F-------n-a~~e~E~i~NfKlLQ~af~Kn 82 (185)
+.|+..||++.++.++.. .|.|.+|+.-|++++.+.||+||++ + + ++..+-+..|...+-++.++.
T Consensus 27 ~~e~~~WIe~~lg~~lp~~~~f~~~LrDGvvLCkL~N~l~P~sv~~~kI~~~~~~~~~~~~~~f~~~eNI~~FL~ac~~~ 106 (190)
T 2rr8_A 27 LEEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMDEI 106 (190)
T ss_dssp HHHHHHHHHHHSCCCCCCHHHHHHHHSSHHHHHHHHHHSCTTTSCSSCSSTTTCHHHHHTCCCSSTHHHHHHHHHGGGGT
T ss_pred HHHHHHHHHHHhCCCCCChhHHHHHHcchhhHHHHHHHhCCCCcccccccccccccccCCCCcchHHHHHHHHHHHHHHc
Confidence 478999999999988753 3569999999999999999999864 2 1 345566778888888887777
Q ss_pred hhccC
Q psy12631 83 RRAKG 87 (185)
Q Consensus 83 ~i~k~ 87 (185)
|+++.
T Consensus 107 Gvp~~ 111 (190)
T 2rr8_A 107 GLPKI 111 (190)
T ss_dssp TCCST
T ss_pred CCCcc
Confidence 77653
No 32
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=97.30 E-value=0.00035 Score=58.26 Aligned_cols=81 Identities=14% Similarity=0.176 Sum_probs=55.9
Q ss_pred ccHHHHHHHhHHHhcCCc--chh----hhcCCCchHHHhhHhhcCCcccee-cc-CCCHHHHHHHHHHHHhhhhhhhhcc
Q psy12631 15 LSRHDMLHWVNDTLQSSF--GKI----EELCSGAAYCQFMDMLFPGLYSIF-IL-RNLLHTFVLHLILKAQQDSKNRRAK 86 (185)
Q Consensus 15 ~SR~ELL~WiN~~L~~~~--tKI----Eel~tGAaYCQlmD~lfPg~Ipmk-Fn-a~~e~E~i~NfKlLQ~af~Kn~i~k 86 (185)
.++..||.|+|..+.. + .+| .+..+|.|||.|++.+.|+.++.. .. .. +-.+|.+. ||+
T Consensus 135 ~~~~~LL~W~~~~~~~-~~~~~i~nFs~s~~DG~a~~aLi~~~~P~li~~~~~~~~~---~~~~n~~~---a~~------ 201 (246)
T 1dxx_A 135 NSEKILLSWVRQSTRN-YPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVSQQ---SATQRLEH---AFN------ 201 (246)
T ss_dssp CHHHHHHHHHHHHHTT-CTTCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHTCC---CHHHHHHH---HHH------
T ss_pred cHHHHHHHHHHHHhcc-CCCCCcCCCcccchhHHHHHHHHHHHCcCccchhhhcccC---CHHHHHHH---HHH------
Confidence 3567899999998762 2 123 347899999999999999999865 33 22 33455443 443
Q ss_pred CCCccccchhhhhhHHHHhhhccccccchhhhhcccc
Q psy12631 87 GYGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGL 123 (185)
Q Consensus 87 ~~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~ 123 (185)
..-+++||++.+..+.++.++.
T Consensus 202 ---------------~A~~~lGi~~~l~peDi~~~~p 223 (246)
T 1dxx_A 202 ---------------IARYQLGIEKLLDPEDVDTTYP 223 (246)
T ss_dssp ---------------HHHHTTCCCCCCCHHHHSSSSC
T ss_pred ---------------HHHHhCCCCccCCHHHhhcCCC
Confidence 1123578888888888887765
No 33
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=97.20 E-value=0.00064 Score=57.47 Aligned_cols=85 Identities=15% Similarity=0.123 Sum_probs=59.4
Q ss_pred HHHHHHHhHHHhcC-Ccchhhh----cCCCchHHHhhHhhcCCccce-------eccCCCHHHHHHHHHHHHhhhhhhhh
Q psy12631 17 RHDMLHWVNDTLQS-SFGKIEE----LCSGAAYCQFMDMLFPGLYSI-------FILRNLLHTFVLHLILKAQQDSKNRR 84 (185)
Q Consensus 17 R~ELL~WiN~~L~~-~~tKIEe----l~tGAaYCQlmD~lfPg~Ipm-------kFna~~e~E~i~NfKlLQ~af~Kn~i 84 (185)
+..||.|+|..++. .+.+|+. ..+|-|||.|++.+.|+.+|. .+.+-.+.+-++|.+..=++.
T Consensus 170 ~~~LL~W~n~~l~~~g~~~I~nF~~s~~DG~a~~aLi~~~~P~~~~~~~~~l~~~~~~~~~~~~~~n~~~a~~~A----- 244 (275)
T 1aoa_A 170 EELLLRWANFHLENSGWQKINNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQA----- 244 (275)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSCSSTTTTTSHHHHHHHHHHSCCSCSSSCCCCCCCCTTTTCSSHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHhcCCCcchhhhhhhhhhHHHHHHHHHHCCCccccccccccccccCCCccCHHHHHHHHHHHH-----
Confidence 56699999998752 2333443 577999999999999996653 366666677888877654432
Q ss_pred ccCCCccccchhhhhhHHHHhhhccccccchhhhhcccccch
Q psy12631 85 AKGYGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDN 126 (185)
Q Consensus 85 ~k~~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDN 126 (185)
+++||++.+..+.++.+.-.-+
T Consensus 245 --------------------~~lGi~~~l~peDi~~~~~k~i 266 (275)
T 1aoa_A 245 --------------------DKLGCRQFVTPADVVSGNPKLN 266 (275)
T ss_dssp --------------------TTTTCCCSCCHHHHHTTCHHHH
T ss_pred --------------------HHcCCCCcCCHHHcCCCChhHH
Confidence 3566667777788887654333
No 34
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=97.08 E-value=0.00054 Score=62.54 Aligned_cols=69 Identities=14% Similarity=0.174 Sum_probs=48.2
Q ss_pred ccHHHHHHHhHHHhcC-----Ccchh-hhcCCCchHHHhhHhhcCCccceeccCCCHHHHHHHHHHHHhhhhhhhhc
Q psy12631 15 LSRHDMLHWVNDTLQS-----SFGKI-EELCSGAAYCQFMDMLFPGLYSIFILRNLLHTFVLHLILKAQQDSKNRRA 85 (185)
Q Consensus 15 ~SR~ELL~WiN~~L~~-----~~tKI-Eel~tGAaYCQlmD~lfPg~IpmkFna~~e~E~i~NfKlLQ~af~Kn~i~ 85 (185)
..+..||.|+|..|+. +++.. .+..+|-+||-|++.+.|+.+++. +-.+.+..+|.+..=++.++.||+
T Consensus 152 ~~~~~LL~W~n~~l~~~g~~~~v~nFs~s~~DG~a~~~Ll~~~~P~~i~~~--~l~~~~~~~n~~~a~~~a~~lGi~ 226 (506)
T 1pxy_A 152 PPEKVLLKWMNFHLKKGGYKKTVSNFSADLKDAQAYAFLLNVLAPEHCDPA--TLDAKDPLERAELVLSHAERMNCK 226 (506)
T ss_dssp CHHHHHHHHHHHHHHHTTCCSCCCCSSTTTTTSHHHHHHHHHHCGGGCCGG--GGGCCSHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHhcCCCccCccccccccchHHHHHHHHHhCccccccc--cCCcCCHHHHHHHHHHHHHHcCCC
Confidence 3567899999987752 22222 468899999999999999999854 334456788888755444444443
No 35
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=97.06 E-value=0.0009 Score=57.46 Aligned_cols=96 Identities=18% Similarity=0.168 Sum_probs=65.1
Q ss_pred ccHHHHHHHhHHHhc----CCcchhhhcCCCchHHHhhHhhcCCccceeccCCCHHHHHHHHHHHHhhhhhhhhccCCCc
Q psy12631 15 LSRHDMLHWVNDTLQ----SSFGKIEELCSGAAYCQFMDMLFPGLYSIFILRNLLHTFVLHLILKAQQDSKNRRAKGYGY 90 (185)
Q Consensus 15 ~SR~ELL~WiN~~L~----~~~tKIEel~tGAaYCQlmD~lfPg~IpmkFna~~e~E~i~NfKlLQ~af~Kn~i~k~~~~ 90 (185)
..+..||.|+|..+. .|++. +..+|-|||-|++.+.|+.+| .|..-.+.+-.+|.+.. |+
T Consensus 170 s~k~~LL~W~n~~~~~~~I~nFs~--sw~DG~af~aLi~~~~P~li~-d~~~l~~~~~~~n~~~A---f~---------- 233 (272)
T 3hoc_A 170 TPKQRLLGWIQNKLPQLPITNFSR--DWQSGRALGALVDSCAPGLCP-DWDSWDASKPVTNAREA---MQ---------- 233 (272)
T ss_dssp CHHHHHHHHHHHHCTTSCCCCSSG--GGTTSHHHHHHHHHHSTTSST-TGGGSCTTCHHHHHHHH---HH----------
T ss_pred CHHHHHHHHHHhhCCCCCCCChhh--cccchHHHHHHHHHhCccccc-chhhcCccCHHHHHHHH---HH----------
Confidence 357789999999765 23443 578899999999999999884 13333334567777664 33
Q ss_pred cccchhhhhhHHHHhh-hccccccchhhhhcccccchHHHHHHHHHHHHH
Q psy12631 91 LGIWTAWHFVAVIYHR-IRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVA 139 (185)
Q Consensus 91 ~~~~~~~~~v~~~f~r-~~i~~~ipV~kLvkg~~qDNleflqW~k~f~da 139 (185)
+-++ +||++.+..+.++.++ .|-.-.+-.+..||.|
T Consensus 234 ------------~Ae~~lGi~~ll~peDiv~~~-pD~ksimtYvs~~~~a 270 (272)
T 3hoc_A 234 ------------QADDWLGIPQVITPEEIVDPN-VDKHSVMTYLSQFPKA 270 (272)
T ss_dssp ------------HHHHHHCCCCSSCHHHHTCTT-CCHHHHHHHHTTCC--
T ss_pred ------------HHHHhCCCCccCCHHHhccCC-CChHHHHHHHHHhhcc
Confidence 1234 8888889988888864 5666666655555544
No 36
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=96.96 E-value=0.00094 Score=61.14 Aligned_cols=69 Identities=19% Similarity=0.259 Sum_probs=50.1
Q ss_pred cHHHHHHHhHHHhcC-----Ccchh-hhcCCCchHHHhhHhhcCCccceeccCCCHHHHHHHHHHHHhhhhhhhhcc
Q psy12631 16 SRHDMLHWVNDTLQS-----SFGKI-EELCSGAAYCQFMDMLFPGLYSIFILRNLLHTFVLHLILKAQQDSKNRRAK 86 (185)
Q Consensus 16 SR~ELL~WiN~~L~~-----~~tKI-Eel~tGAaYCQlmD~lfPg~IpmkFna~~e~E~i~NfKlLQ~af~Kn~i~k 86 (185)
.+..||.|+|..++. .++.. .+..+|.+||-|++.+.|+.+++. +-.+.+..+|.+..-++.++.||++
T Consensus 162 ~~~~LL~W~n~~l~~~g~~~~V~nFs~s~~DG~a~~aLl~~~~P~~i~~~--~l~~~~~~~n~~~a~~~a~~lgi~~ 236 (513)
T 1rt8_A 162 PEKILLRWFNYHLKAANWPRTVSNFSKDVSDGENYTVLLNQLAPELCSRA--PLQTTDVLQRAEQVLQNAEKLDCRK 236 (513)
T ss_dssp HHHHHHHHHHHHHHHTTCSCCCSCSSGGGTTSHHHHHHHHHHCTTTCCSG--GGGCCCHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHHHhcCCCcCcccchhhhhccHHHHHHHHHHCccccccC--CCCccCHHHHHHHHHHHHHHcCCCc
Confidence 367799999998752 23222 347789999999999999998854 4444567788888766666666654
No 37
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction, alternative splicing, calponin homology domain, actin-binding, cell membrane; 1.05A {Homo sapiens} PDB: 2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Probab=96.77 E-value=0.0055 Score=47.20 Aligned_cols=90 Identities=12% Similarity=0.130 Sum_probs=67.3
Q ss_pred HHHHHHHhHHHhc---CCcchh-hhcCCCchHHHhhHhhcCCcccee-c--cCCCHHHHHHHHHHHHhhhhhhhhccCCC
Q psy12631 17 RHDMLHWVNDTLQ---SSFGKI-EELCSGAAYCQFMDMLFPGLYSIF-I--LRNLLHTFVLHLILKAQQDSKNRRAKGYG 89 (185)
Q Consensus 17 R~ELL~WiN~~L~---~~~tKI-Eel~tGAaYCQlmD~lfPg~Ipmk-F--na~~e~E~i~NfKlLQ~af~Kn~i~k~~~ 89 (185)
++....|+|..|. ..++.+ +++++|...|++++.+-|+.+|.+ + .|+.....++|..+.=+.+++.|+..
T Consensus 24 ~ktft~WiN~~L~~~~~~v~dL~~Dl~DGv~L~~Lle~ls~~~~~~~~~~~~p~~r~~kieNv~~aL~~lk~~gi~l--- 100 (131)
T 2vzc_A 24 KKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEK--- 100 (131)
T ss_dssp HHHHHHHHHHHHGGGTCCCCCTTTTTTTSHHHHHHHHHHTTCCCCTTSSCSSCCSHHHHHHHHHHHHHHHHHTTCCC---
T ss_pred HHHHHHHHHHHHHHcCCcccCHHHHcccHHHHHHHHHHhcCCCCCHHHhcCCCCcHHHHHHHHHHHHHHHHHcCCCc---
Confidence 4558999999865 345554 589999999999999999999975 4 57888999999998766655444321
Q ss_pred ccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHH
Q psy12631 90 YLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLG 130 (185)
Q Consensus 90 ~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNlefl 130 (185)
..|--+.++-|...-.|-++
T Consensus 101 ---------------------~~I~~~DIvdGn~kliLgLi 120 (131)
T 2vzc_A 101 ---------------------PKPRPEDIVNCDLKSTLRVL 120 (131)
T ss_dssp ---------------------CSSCHHHHHTTCHHHHHHHH
T ss_pred ---------------------CCCCHHHhhCCCHHhHHHHH
Confidence 25777888888766556555
No 38
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=96.68 E-value=0.0061 Score=53.62 Aligned_cols=96 Identities=14% Similarity=0.152 Sum_probs=67.4
Q ss_pred cccHHHHHHHhHHHhcC----CcchhhhcCCCchHHHhhHhhcCCccc-ee-ccCCCHHHHHHHHHHHHhhhhhhhhccC
Q psy12631 14 NLSRHDMLHWVNDTLQS----SFGKIEELCSGAAYCQFMDMLFPGLYS-IF-ILRNLLHTFVLHLILKAQQDSKNRRAKG 87 (185)
Q Consensus 14 ~~SR~ELL~WiN~~L~~----~~tKIEel~tGAaYCQlmD~lfPg~Ip-mk-Fna~~e~E~i~NfKlLQ~af~Kn~i~k~ 87 (185)
...+..||.|+|..+.- |++ ....+|-|+|-|+|.+.|+.++ ++ +.+. +-++|++. ||+
T Consensus 139 ~~~k~~LL~W~~~~~~~~~v~nF~--~sw~DG~af~aLi~~~~P~~~~d~~~l~~~---~~~~n~~~---Af~------- 203 (347)
T 4b7l_A 139 QTPKQRLLGWIQNKIPYLPITNFN--QNWQDGKALGALVDSCAPGLCPDWESWDPQ---KPVDNARE---AMQ------- 203 (347)
T ss_dssp CCHHHHHHHHHHHHCTTSCCCCSS--GGGTTSHHHHHHHHHHSTTSSTTGGGSCTT---CHHHHHHH---HHH-------
T ss_pred hhHHHHHHHHHHhhCCCcccCCCC--CCccchHHHHHHHHHhCCccccchhhcCcC---CHHHHHHH---HHH-------
Confidence 44567899999997642 232 4678999999999999999884 43 4443 45667665 343
Q ss_pred CCccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHHH
Q psy12631 88 YGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVA 139 (185)
Q Consensus 88 ~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~da 139 (185)
..-+.+||++.++.+.++.++ -|-.-.+-.+..||.+
T Consensus 204 --------------~Ae~~lGip~ll~peDi~~~~-pDeksimtYvs~~~~~ 240 (347)
T 4b7l_A 204 --------------QADDWLGVPQVITPEEIIHPD-VDEHSVMTYLSQFPKA 240 (347)
T ss_dssp --------------HHHHHHCCCCSSCHHHHTCTT-CCHHHHHHHHTTGGGC
T ss_pred --------------HHHHhcCCCcccCHHHcCCCC-CChhHHHHHHHHHhhh
Confidence 112347899999999999776 4666666666666655
No 39
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=96.61 E-value=0.0071 Score=50.79 Aligned_cols=71 Identities=8% Similarity=0.080 Sum_probs=55.4
Q ss_pred cHHHHHHHhHHHhcCC---cch-hhhcCCCchHHHhhHhhcCCccceeccCCCHHHHHHHHHHHHhhhhhhhhcc
Q psy12631 16 SRHDMLHWVNDTLQSS---FGK-IEELCSGAAYCQFMDMLFPGLYSIFILRNLLHTFVLHLILKAQQDSKNRRAK 86 (185)
Q Consensus 16 SR~ELL~WiN~~L~~~---~tK-IEel~tGAaYCQlmD~lfPg~IpmkFna~~e~E~i~NfKlLQ~af~Kn~i~k 86 (185)
-.+++..|||..|.-. ++. .++|.+|...|++++.+-|+.++---.++.....++|....-+++++.|+..
T Consensus 28 q~~~f~~WiN~~L~~~~~~v~~l~~dl~DGv~L~~Lle~l~~~~v~k~~~~~~~~~~~eNi~~aL~~~k~~gv~l 102 (254)
T 1wku_A 28 QRKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERLPRPDKGKMRFHKIANVNKALDFIASKGVKL 102 (254)
T ss_dssp HHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCSCCCCCCSCCSHHHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHccccCCCccCHHHHccCHHHHHHHHHHhCcCCCCCCCCCccHHHHHHhHHHHHHHHHHcCCCc
Confidence 3567999999998633 333 3678999999999999999988742235677899999999888887777653
No 40
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=96.59 E-value=0.0041 Score=54.07 Aligned_cols=97 Identities=13% Similarity=0.197 Sum_probs=64.0
Q ss_pred CcccH-HHHHHHhHHHhcCCcc--hh----hhcCCCchHHHhhHhhcCCcccee-ccCCCHHHHHHHHHHHHhhhhhhhh
Q psy12631 13 ENLSR-HDMLHWVNDTLQSSFG--KI----EELCSGAAYCQFMDMLFPGLYSIF-ILRNLLHTFVLHLILKAQQDSKNRR 84 (185)
Q Consensus 13 ~~~SR-~ELL~WiN~~L~~~~t--KI----Eel~tGAaYCQlmD~lfPg~Ipmk-Fna~~e~E~i~NfKlLQ~af~Kn~i 84 (185)
...|- ..||.|+|..+.. +. +| ....+|.|+|-|++.+.|+.|++. ..+. +-.+|.+.. |+
T Consensus 186 ~~~s~k~~LL~W~n~~~~~-y~~v~I~nFs~sw~DG~af~aLI~~~~P~lid~~~l~~~---~~~~N~~~A---f~---- 254 (296)
T 3f7p_A 186 EDMTAKEKLLLWSQRMVEG-YQGLRCDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQ---TNLENLDQA---FS---- 254 (296)
T ss_dssp TTSCHHHHHHHHHHHHTTT-STTCCCCCSSGGGTTSHHHHHHHHHHCGGGCCHHHHTTS---CHHHHHHHH---HH----
T ss_pred ccCCHHHHHHHHHHHHhcC-CCCCcCCCccccccccHHHHHHHHHHCcCccCHHHcCcc---cHHHHHHHH---HH----
Confidence 34554 4599999998863 22 22 578899999999999999999876 5443 345677654 43
Q ss_pred ccCCCccccchhhhhhHHHHhhhccccccchhhhhcccccchHHHHHHHHHHHH
Q psy12631 85 AKGYGYLGIWTAWHFVAVIYHRIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFV 138 (185)
Q Consensus 85 ~k~~~~~~~~~~~~~v~~~f~r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~d 138 (185)
..-.++||++.+..+.++..+ .|-.-.+-.+..||.
T Consensus 255 -----------------~Ae~~LGi~~ll~pEDi~~~~-pDeksimtyvs~ly~ 290 (296)
T 3f7p_A 255 -----------------VAERDLGVTRLLDPEDVDVPQ-PDEKSIITYVSSLYD 290 (296)
T ss_dssp -----------------HHHHHHCCCCCCCHHHHSSSS-CCHHHHHHHHHHHHH
T ss_pred -----------------HHHHhCCCCccCCHHHhcCCC-CcHHHHHHHHHHHHH
Confidence 011357888888888876543 344445555544443
No 41
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=96.58 E-value=0.0042 Score=52.41 Aligned_cols=70 Identities=14% Similarity=0.255 Sum_probs=55.7
Q ss_pred HHHHHHHhHHHhcCC------------cch-hhhcCCCchHHHhhHhhcCCcccee-cc--CCCHHHHHHHHHHHHhhhh
Q psy12631 17 RHDMLHWVNDTLQSS------------FGK-IEELCSGAAYCQFMDMLFPGLYSIF-IL--RNLLHTFVLHLILKAQQDS 80 (185)
Q Consensus 17 R~ELL~WiN~~L~~~------------~tK-IEel~tGAaYCQlmD~lfPg~Ipmk-Fn--a~~e~E~i~NfKlLQ~af~ 80 (185)
.+++..|||..|..+ +.. .++|.+|...|++++.+.|++|+.+ ++ +......++|....-++++
T Consensus 26 ~~~f~~WiN~~L~~~~~~~~~~~i~~~v~dl~~dL~DGv~L~~Lle~l~~~~v~~~~i~~~~~~~~~~~eNv~~aL~~~k 105 (275)
T 1aoa_A 26 KYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKKLTPFIIQENLNLALNSAS 105 (275)
T ss_dssp HHHHHHHHHHHTTTCTTSTTTCSCCTTTTHHHHHGGGSHHHHHHHHHHSTTSSCGGGSCCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCccccccCCCCCccchHHHHhccHHHHHHHHHHhcCCCCCccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 578999999998752 222 4679999999999999999999864 44 3356789999999998888
Q ss_pred hhhhcc
Q psy12631 81 KNRRAK 86 (185)
Q Consensus 81 Kn~i~k 86 (185)
+.|+..
T Consensus 106 ~~g~~l 111 (275)
T 1aoa_A 106 AIGCHV 111 (275)
T ss_dssp HTTCCC
T ss_pred HcCCcc
Confidence 777654
No 42
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=96.50 E-value=0.013 Score=48.61 Aligned_cols=71 Identities=11% Similarity=0.166 Sum_probs=56.9
Q ss_pred ccHHHHHHHhHHHhcC--------Ccch-hhhcCCCchHHHhhHhhcCCccceeccCCCHHHHHHHHHHHHhhhhhhhhc
Q psy12631 15 LSRHDMLHWVNDTLQS--------SFGK-IEELCSGAAYCQFMDMLFPGLYSIFILRNLLHTFVLHLILKAQQDSKNRRA 85 (185)
Q Consensus 15 ~SR~ELL~WiN~~L~~--------~~tK-IEel~tGAaYCQlmD~lfPg~IpmkFna~~e~E~i~NfKlLQ~af~Kn~i~ 85 (185)
.-++.+..|||..|.. .++. -++|.+|...|++++.+-|+.+| +..++.....++|....-+++++.|+.
T Consensus 12 ~q~~~f~~WiN~~L~~~~~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~-~~~~~~~~~~~eNv~~aL~~~k~~g~~ 90 (245)
T 1sh5_A 12 VQKKTFTKWVNKHLIKHWRAEAQRHISDLYEDLRDGHNLISLLEVLSGDSLP-REKGRMRFHKLQNVQIALDYLRHRQVK 90 (245)
T ss_dssp HHHHHHHHHHHHHHTTCSSGGGCCCCSCTTTTTTTSHHHHHHHHHHHCCCCC-CCCCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhccccccccCCCCccchHhhccCHHHHHHHHHHhcCcccc-CCCCcchHHHHHhHHHHHHHHHHcCCc
Confidence 3456799999999865 2333 46699999999999999999988 456777889999999998888877664
Q ss_pred c
Q psy12631 86 K 86 (185)
Q Consensus 86 k 86 (185)
.
T Consensus 91 l 91 (245)
T 1sh5_A 91 L 91 (245)
T ss_dssp C
T ss_pred c
Confidence 3
No 43
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=96.09 E-value=0.011 Score=49.17 Aligned_cols=72 Identities=10% Similarity=0.103 Sum_probs=57.7
Q ss_pred cccHHHHHHHhHHHhcC----Ccch-hhhcCCCchHHHhhHhhcCCccceeccCCCHHHHHHHHHHHHhhhhhhhhcc
Q psy12631 14 NLSRHDMLHWVNDTLQS----SFGK-IEELCSGAAYCQFMDMLFPGLYSIFILRNLLHTFVLHLILKAQQDSKNRRAK 86 (185)
Q Consensus 14 ~~SR~ELL~WiN~~L~~----~~tK-IEel~tGAaYCQlmD~lfPg~IpmkFna~~e~E~i~NfKlLQ~af~Kn~i~k 86 (185)
..-.+++..|||..|.. .++. -++|.+|...|++++.|-|+.+|- .+++.....++|....-+++++.|+..
T Consensus 15 ~~q~~~f~~WiN~~L~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~-~~~~~~~~~~eNv~~aL~~~k~~g~~l 91 (246)
T 1dxx_A 15 DVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPK-EKGSTRVHALNNVNKALRVLQNNNVDL 91 (246)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCSCTTTTTTTSHHHHHHHHHHHSCCCCC-CCCSSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHhccccCCCCccCHHHHhCcHHHHHHHHHHHcCCcCCC-CCCccHHHHHHHHHHHHHHHHHcCCcc
Confidence 34456799999999862 3333 467999999999999999988874 467778899999999999888877764
No 44
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=96.02 E-value=0.0038 Score=58.93 Aligned_cols=95 Identities=14% Similarity=0.208 Sum_probs=63.9
Q ss_pred cHHHHHHHhHHHhcCCcc--hh----hhcCCCchHHHhhHhhcCCcccee-ccCCCHHHHHHHHHHHHhhhhhhhhccCC
Q psy12631 16 SRHDMLHWVNDTLQSSFG--KI----EELCSGAAYCQFMDMLFPGLYSIF-ILRNLLHTFVLHLILKAQQDSKNRRAKGY 88 (185)
Q Consensus 16 SR~ELL~WiN~~L~~~~t--KI----Eel~tGAaYCQlmD~lfPg~Ipmk-Fna~~e~E~i~NfKlLQ~af~Kn~i~k~~ 88 (185)
.+..||.|+|..+. .|+ .| ....+|-|||-|++.+.|+.|+.. +.+.. -.+|.+.. |+
T Consensus 122 ~~~~ll~W~~~~~~-~~~~~~v~nf~~s~~dg~~~~~li~~~~p~~~~~~~~~~~~---~~~n~~~a---~~-------- 186 (863)
T 1sjj_A 122 AKEGLLLWYQRKTA-PYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDD---PLTNLNTA---FD-------- 186 (863)
T ss_dssp STTTTHHHHHHHHT-TSTTCCCCSSSGGGTTSHHHHHHHHTTCCSSSCSGGGGSCC---CGGGCTHH---HH--------
T ss_pred hHHHHHHHHHHhcc-CCCCCCCCCCccccccHHHHHHHHHHhCCCCcChhhCCCCC---HHHHHHHH---HH--------
Confidence 35679999998774 222 12 267899999999999999999976 55532 33444432 22
Q ss_pred CccccchhhhhhHHHHh-hhccccccchhhhhcccccchHHHHHHHHHHHHH
Q psy12631 89 GYLGIWTAWHFVAVIYH-RIRIGTYLPTHLLVLLGLVDNRYLGIWTAWHFVA 139 (185)
Q Consensus 89 ~~~~~~~~~~~v~~~f~-r~~i~~~ipV~kLvkg~~qDNleflqW~k~f~da 139 (185)
+.. .+||++.+..+.++.+.-.|-.-.+-.+..||..
T Consensus 187 --------------~a~~~lg~~~~l~~ed~~~~~~pd~~~~~~y~~~l~~~ 224 (863)
T 1sjj_A 187 --------------VAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHA 224 (863)
T ss_dssp --------------HHHHHHCCCCSCCHHHHTTCSSCCHHHHHHHHHHTTTT
T ss_pred --------------HHHHhCCCCCccCHHHHhCCCCCcHHHHHHHHHHHHHH
Confidence 123 3788888888998887656666666655554433
No 45
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=95.99 E-value=0.024 Score=49.28 Aligned_cols=68 Identities=12% Similarity=0.177 Sum_probs=54.7
Q ss_pred HHHHHHHhHHHhcC---Ccch-hhhcCCCchHHHhhHhhcCCccceeccCCCHHHHHHHHHHHHhhhhhhhhc
Q psy12631 17 RHDMLHWVNDTLQS---SFGK-IEELCSGAAYCQFMDMLFPGLYSIFILRNLLHTFVLHLILKAQQDSKNRRA 85 (185)
Q Consensus 17 R~ELL~WiN~~L~~---~~tK-IEel~tGAaYCQlmD~lfPg~IpmkFna~~e~E~i~NfKlLQ~af~Kn~i~ 85 (185)
++.+..|||..|.- .++. -|+|.+|...|++++.|-|+.+|- -.++.....++|....-+++++.|+.
T Consensus 75 kktft~WINs~L~~~~~~V~dL~~DL~DGvvL~~Lle~L~~~~l~~-~~~~~r~~kleNvn~aL~~lk~~gv~ 146 (296)
T 3f7p_A 75 KKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLISLLEVLSGDSLPR-EKGRMRFHKLQNVQIALDYLRHRQVK 146 (296)
T ss_dssp HHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHCCCCCC-CCCSSHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHcccCCCCcccHHHHHhhHHHHHHHHHHhcCCcccc-cCCcChhhhhhhHHHHHHHHHHhCcc
Confidence 46799999999853 3333 366999999999999999998885 46777889999999988887776654
No 46
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=95.88 E-value=0.03 Score=46.58 Aligned_cols=72 Identities=10% Similarity=0.177 Sum_probs=55.8
Q ss_pred ccHHHHHHHhHHHhcC---Ccch-hhhcCCCchHHHhhHhhcCCccceecc--CCCHHHHHHHHHHHHhhhhhhhhcc
Q psy12631 15 LSRHDMLHWVNDTLQS---SFGK-IEELCSGAAYCQFMDMLFPGLYSIFIL--RNLLHTFVLHLILKAQQDSKNRRAK 86 (185)
Q Consensus 15 ~SR~ELL~WiN~~L~~---~~tK-IEel~tGAaYCQlmD~lfPg~IpmkFn--a~~e~E~i~NfKlLQ~af~Kn~i~k 86 (185)
.-++++..|||+.|.- .++. .++|.+|...|++++.+-|+.++-+++ ++.....++|....-+++++.|+.-
T Consensus 20 ~q~~~f~~WiN~~L~~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~~~~~~n~~~~~~~~~~eNv~~aL~~~k~~g~~l 97 (245)
T 2wa7_A 20 IQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLDRESIKL 97 (245)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCSSCCCSSCCSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHhccccCCCccCHHHHcccHHHHHHHHHHHcCCCCchhcCCCCCcHHHHHHHHHHHHHHHHHcCCcc
Confidence 3456799999999852 2222 468999999999999999998853443 5677889999999888888777653
No 47
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=94.95 E-value=0.037 Score=52.22 Aligned_cols=71 Identities=8% Similarity=0.070 Sum_probs=55.4
Q ss_pred cHHHHHHHhHHHhcC---Ccch-hhhcCCCchHHHhhHhhcCCccceeccCCCHHHHHHHHHHHHhhhhhhhhcc
Q psy12631 16 SRHDMLHWVNDTLQS---SFGK-IEELCSGAAYCQFMDMLFPGLYSIFILRNLLHTFVLHLILKAQQDSKNRRAK 86 (185)
Q Consensus 16 SR~ELL~WiN~~L~~---~~tK-IEel~tGAaYCQlmD~lfPg~IpmkFna~~e~E~i~NfKlLQ~af~Kn~i~k 86 (185)
-++.+..|||..|.- .++. .++|.+|...|++++.|-|+.+|---.++.....++|..+.-+++.+.|+.-
T Consensus 9 q~~~f~~Win~~L~~~~~~v~~l~~dl~DG~~L~~l~e~l~~~~~~~~~~~~~~~~~~eN~~~~l~~~~~~g~~~ 83 (863)
T 1sjj_A 9 QRKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKL 83 (863)
T ss_dssp HHHHHHHHHHHHHHHHCSCCCCCSSTTSSCHHHHHHHHHTSCCCCCCSCCCSSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHhccCCCCccCHHHHhcCHHHHHHHHHHhCCCceeCCCCCccHHHHHHHHHHHHHHHHHcCCcc
Confidence 346799999999853 2333 2678999999999999999988742345778899999998888877777653
No 48
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=94.67 E-value=0.13 Score=44.05 Aligned_cols=70 Identities=9% Similarity=0.150 Sum_probs=53.7
Q ss_pred cHHHHHHHhHHHhcC---Ccch-hhhcCCCchHHHhhHhhcCCccceec--cCCCHHHHHHHHHHHHhhhhhhhhc
Q psy12631 16 SRHDMLHWVNDTLQS---SFGK-IEELCSGAAYCQFMDMLFPGLYSIFI--LRNLLHTFVLHLILKAQQDSKNRRA 85 (185)
Q Consensus 16 SR~ELL~WiN~~L~~---~~tK-IEel~tGAaYCQlmD~lfPg~IpmkF--na~~e~E~i~NfKlLQ~af~Kn~i~ 85 (185)
-++.+..|||..|.. .++. -+++.+|...|++++.|-|+.+.-++ .|+...+.++|..+.-+++++.|+.
T Consensus 48 Qkktft~WiN~~L~~~~~~V~dL~~DL~DGv~L~~Lle~Ls~~~l~~~~~~~p~~r~~kleNv~~aL~~lk~~gv~ 123 (272)
T 3hoc_A 48 QQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIK 123 (272)
T ss_dssp HHHHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTSCCSSCCCSSCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhccCCCCcccHHHHHhhHHHHHHHHHHHcCCccccccCCCCccHHHHHHHHHHHHHHHHHcCCc
Confidence 345689999998743 3333 26799999999999999999883344 4667788999999888887776664
No 49
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=94.60 E-value=0.059 Score=49.51 Aligned_cols=71 Identities=13% Similarity=0.187 Sum_probs=54.0
Q ss_pred HHHHHHHhHHHhcCCcc-----------h-hhhcCCCchHHHhhHhhcCCcccee-cc--CCC-HHHHHHHHHHHHhhh-
Q psy12631 17 RHDMLHWVNDTLQSSFG-----------K-IEELCSGAAYCQFMDMLFPGLYSIF-IL--RNL-LHTFVLHLILKAQQD- 79 (185)
Q Consensus 17 R~ELL~WiN~~L~~~~t-----------K-IEel~tGAaYCQlmD~lfPg~Ipmk-Fn--a~~-e~E~i~NfKlLQ~af- 79 (185)
-+|--.||++...+... . .|-|.+|++-|+|++.+.||+||++ .+ ++. .+-...|..-+-+|.
T Consensus 7 w~~~~~Wl~~~~~l~~~~~~~~~~~~~~~l~~~L~~G~~Lc~l~n~l~p~~v~~~~~~~~~~~~~f~~~~ni~~Fl~~~~ 86 (587)
T 3ky9_A 7 WRQCTHWLIQCRVLPPSHRVTWEGAQVCELAQALRDGVLLCQLLNNLLPHAINLREVNLRPQMSQFLCLKNIRTFLSTCC 86 (587)
T ss_dssp HHHHHHHHHHTTCSCTTSTTTSTTCCHHHHHHHHSSTHHHHHHHHHHSTTSSCGGGSCSSCTTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccccCCCCChhhHHHHhCcHHHHHHHHHHhCCCCCCccccCCCccccchHHHHHHHHHHHHHH
Confidence 36888999987554442 1 3568999999999999999999975 54 333 577788888877777
Q ss_pred hhhhhccC
Q psy12631 80 SKNRRAKG 87 (185)
Q Consensus 80 ~Kn~i~k~ 87 (185)
++.|+++.
T Consensus 87 ~~~g~~~~ 94 (587)
T 3ky9_A 87 EKFGLKRS 94 (587)
T ss_dssp HTTCCCTT
T ss_pred HHcCCCHH
Confidence 77888764
No 50
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=92.37 E-value=0.63 Score=40.74 Aligned_cols=68 Identities=12% Similarity=0.208 Sum_probs=52.4
Q ss_pred HHHHHHhHHHhcC---Ccchh-hhcCCCchHHHhhHhhcCCccceec--cCCCHHHHHHHHHHHHhhhhhhhhc
Q psy12631 18 HDMLHWVNDTLQS---SFGKI-EELCSGAAYCQFMDMLFPGLYSIFI--LRNLLHTFVLHLILKAQQDSKNRRA 85 (185)
Q Consensus 18 ~ELL~WiN~~L~~---~~tKI-Eel~tGAaYCQlmD~lfPg~IpmkF--na~~e~E~i~NfKlLQ~af~Kn~i~ 85 (185)
+-.-.|+|..|.- .++.+ ++|.+|...|+|++.|-+..++-++ .++.....++|..+.=+.+++.|+.
T Consensus 20 ktFt~WiN~~L~~~~~~V~dL~~Dl~DG~~L~~Lle~ls~~~l~~~~~~~p~~r~~k~eNv~~al~~~~~~g~~ 93 (347)
T 4b7l_A 20 NTFTRWCNEHLKSVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLDRESIK 93 (347)
T ss_dssp HHHHHHHHHHHGGGTCCCSCTTTTTTTSHHHHHHHHHHHTCCCSSCCCSSCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhhCcCCCCcCCHHHHhcCHHHHHHHHHHHcCCccChhhcCCcccHHHHHHHHHHHHHHHHHhccc
Confidence 3478899998753 44443 5799999999999999999888664 5777888899988877766655543
No 51
>1wix_A HOOK homolog 1, RSGI RUH-026; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.40.3.1
Probab=91.11 E-value=0.11 Score=41.37 Aligned_cols=66 Identities=11% Similarity=0.090 Sum_probs=45.6
Q ss_pred ccHHHHHHHhHHHh-cCCcchhhhcCCCchHHHhhHhhcCCccceec----cCC---CHHHHHHHHHHHHhhhh
Q psy12631 15 LSRHDMLHWVNDTL-QSSFGKIEELCSGAAYCQFMDMLFPGLYSIFI----LRN---LLHTFVLHLILKAQQDS 80 (185)
Q Consensus 15 ~SR~ELL~WiN~~L-~~~~tKIEel~tGAaYCQlmD~lfPg~IpmkF----na~---~e~E~i~NfKlLQ~af~ 80 (185)
.-...|+.|+|..- ....+.+++|++|++.-+++..|-|.-.+-.| +.. .-.--.+|+|.+=+.+.
T Consensus 9 ~~~~aLl~W~~tf~~~~~~~~~~dL~DG~~L~~iL~~IDp~~F~~~~l~~i~~~~~~nw~lr~~NLk~l~~~i~ 82 (164)
T 1wix_A 9 PLCDSLIIWLQTFKTASPCQDVKQLTNGVTMAQVLHQIDVAWFSESWLSRIKDDVGDNWRIKASNLKKVLHGIT 82 (164)
T ss_dssp HHHHHHHHHHTTCCCSSCCCSHHHHTTSHHHHHHHHHHCTTTSCHHHHTTCCSGGGGCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCcHHHhccHHHHHHHHHHhCccccCchHhhhhcccCcccHHHHHHHHHHHHHHHH
Confidence 33467999999842 23578899999999999999999998544322 211 11236678888765543
No 52
>2krx_A ASL3597 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Nostoc SP}
Probab=20.49 E-value=55 Score=24.26 Aligned_cols=25 Identities=12% Similarity=0.158 Sum_probs=19.1
Q ss_pred EecCCC-CCcccHHHHHHHhHHHhcC
Q psy12631 6 YSTNVT-SENLSRHDMLHWVNDTLQS 30 (185)
Q Consensus 6 ~~t~~~-~~~~SR~ELL~WiN~~L~~ 30 (185)
..-++. ..++|..||++|+-+.|+.
T Consensus 14 vLEp~~~EqfLT~~Ell~~Lk~~L~~ 39 (94)
T 2krx_A 14 VLETNQPEQFLTTIELLEKLKGELEK 39 (94)
T ss_dssp EEESSSCSEEECHHHHHHHHHHHHHH
T ss_pred EecCCCCcccCCHHHHHHHHHHHHHh
Confidence 333443 4899999999999998864
No 53
>1t9i_A DNA endonuclease I-CREI; protein, hydrolase/DNA complex; HET: DNA; 1.60A {Chlamydomonas reinhardtii} SCOP: d.95.2.1 PDB: 1n3f_A* 1n3e_A* 1t9j_A* 1u0d_A* 1u0c_A* 2o7m_A* 2i3p_A* 4aae_A* 1g9z_A* 1bp7_A* 1g9y_A* 3mxb_B* 2i3q_A* 4aab_A* 4aad_A* 4aaf_A* 4aag_A* 3mxb_A* 2vbo_A* 2vbn_A* ...
Probab=20.39 E-value=51 Score=25.36 Aligned_cols=18 Identities=11% Similarity=-0.149 Sum_probs=15.5
Q ss_pred cchHHHHHHHHHHHHHHh
Q psy12631 124 VDNRYLGIWTAWHFVAVI 141 (185)
Q Consensus 124 qDNleflqW~k~f~dan~ 141 (185)
-++.+|.+|+.+|.|+..
T Consensus 4 ~~~~~F~~WLaGFiDgeG 21 (163)
T 1t9i_A 4 KYNKEFLLYLAGFVDGNG 21 (163)
T ss_dssp CCCHHHHHHHHHHHHHHC
T ss_pred CCcchhhhheEEEEecce
Confidence 467899999999999954
Done!