BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12637
(270 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q924M7|MPI_MOUSE Mannose-6-phosphate isomerase OS=Mus musculus GN=Mpi PE=2 SV=1
Length = 423
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 128/214 (59%), Gaps = 8/214 (3%)
Query: 3 LSFSIQTYEWGKIGLDSKVAQLVEAAG--GTVDKDKNYAELWLGTHPSGPSSILSQCSRS 60
LS +Q Y WGK+G S+VA L+ ++ + +DK YAELW+GTHP G + IL
Sbjct: 9 LSCVVQQYAWGKVGSKSEVACLLASSDPLAQISEDKPYAELWMGTHPRGDAKILDNRISQ 68
Query: 61 ENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDI 120
+ L WI NP CLG+ V + F KLPFL KVLSVD ALSIQ HP+KE A KLH + P+
Sbjct: 69 KTLGQWIAENPDCLGSKVKNTFNGKLPFLFKVLSVDTALSIQAHPNKELAEKLHLQAPEH 128
Query: 121 YKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMVSCMNIEV- 179
Y D NHKPE+AIAL+ F+ LCGF+P+E I +++ E Q +IG+ + + +
Sbjct: 129 YPDANHKPEMAIALTSFQGLCGFRPVEEIVTFMKKVPEFQLLIGDDATAQLKESVGGDTE 188
Query: 180 -----FKEIFHAIMSAPQAQVEKQLCLLNETIHR 208
+ F +M + + V +QL LL + I +
Sbjct: 189 AMASALRNCFSHLMKSEKKVVVEQLNLLVKRISQ 222
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 214 IATLCSLLNYKFGPPEAKLLIPV--IKDESCRFYLPPVADFGVAKIQVSS 261
+ TLC +LNY P +L P D Y PPV DF V K++V S
Sbjct: 305 VPTLCEMLNYTPSPSNNRLFAPAQSQDDPYLSIYDPPVPDFTVMKMEVPS 354
>sp|Q68FX1|MPI_RAT Mannose-6-phosphate isomerase OS=Rattus norvegicus GN=Mpi PE=2 SV=1
Length = 423
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 124/214 (57%), Gaps = 8/214 (3%)
Query: 3 LSFSIQTYEWGKIGLDSKVAQLVEAAG--GTVDKDKNYAELWLGTHPSGPSSILSQCSRS 60
LS +Q Y WGK+G S+VA L+ + + +DK YAELW+G HP G + IL
Sbjct: 9 LSCVVQQYAWGKVGSKSEVACLLACSDPLTQISEDKPYAELWMGAHPRGDAKILDNRISQ 68
Query: 61 ENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDI 120
+ L WI N + LG V F KLPFL KVLSV+ ALSIQ HP+KE A KLH + P+
Sbjct: 69 KTLGQWIAENQNSLGQKVKDTFNGKLPFLFKVLSVETALSIQAHPNKELAEKLHLQAPEH 128
Query: 121 YKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMVSCMN---- 176
Y D NHKPE+AIAL+ F+ LCGF+P+E I +++ E Q++IGE + MN
Sbjct: 129 YPDANHKPEMAIALTPFQGLCGFRPVEEIVTFLKKVPEFQSLIGEDATAQLKKSMNEGSG 188
Query: 177 --IEVFKEIFHAIMSAPQAQVEKQLCLLNETIHR 208
K F +M + + V +QL LL + I +
Sbjct: 189 AMASALKNCFSHLMKSEKKVVVEQLNLLVKRISQ 222
Score = 38.5 bits (88), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 214 IATLCSLLNYKFGPPEAKLLIPVI--KDESCRFYLPPVADFGVAKIQV 259
++TLC +L+Y P + +L P + D Y PPV DF V KI+V
Sbjct: 305 VSTLCEMLDYTPSPSKDRLFAPTLSQDDPYLSIYDPPVPDFTVMKIEV 352
>sp|Q9M884|MPI1_ARATH Mannose-6-phosphate isomerase 1 OS=Arabidopsis thaliana GN=PMI1
PE=1 SV=1
Length = 432
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 10/211 (4%)
Query: 6 SIQTYEWGKIGLDSKVAQLVEAAGG-TVDKDKNYAELWLGTHPSGPSSIL-SQCSRSENL 63
S++ Y+WGKIG DS V ++ A +D + YAELW+GTH SGPS + + S L
Sbjct: 26 SVKDYDWGKIGSDSLVYRVYAANSDYEIDPTRPYAELWMGTHESGPSYLEDADGSNGVTL 85
Query: 64 ESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDIYKD 123
SWI NP LG V+ ++G LPFL KVLSV + LSIQ HP K+ A K+H+ P++YKD
Sbjct: 86 RSWITENPKSLGNRVLEKWGCDLPFLFKVLSVARPLSIQAHPDKKLAKKMHKAHPNLYKD 145
Query: 124 ENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMVSCMN------- 176
+NHKPE+A+A ++FEALCGF PL+ +K I E++ ++G S + V C+
Sbjct: 146 DNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVG-SEEANQVFCITEHDEEKV 204
Query: 177 IEVFKEIFHAIMSAPQAQVEKQLCLLNETIH 207
V + IF +MSA +K + L +H
Sbjct: 205 KSVVRTIFTLLMSADADTTKKIVSKLKRRLH 235
>sp|Q3SZI0|MPI_BOVIN Mannose-6-phosphate isomerase OS=Bos taurus GN=MPI PE=2 SV=3
Length = 423
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 127/214 (59%), Gaps = 8/214 (3%)
Query: 3 LSFSIQTYEWGKIGLDSKVAQLVEAAG--GTVDKDKNYAELWLGTHPSGPSSILSQCSRS 60
LS +Q Y WGK+G +S+VA+L+ ++ + +D+ YAELW+GTHP G + IL
Sbjct: 9 LSCVVQQYAWGKMGSNSEVARLLASSDPLAQISEDRPYAELWMGTHPRGDAKILDNRISQ 68
Query: 61 ENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDI 120
+ L WI +N LG+ V F KLPFL KVLSV+ ALSIQ HP+KE A KLH + P
Sbjct: 69 KTLGQWIADNQDSLGSKVKDTFNGKLPFLFKVLSVETALSIQAHPNKELAEKLHLQAPQH 128
Query: 121 YKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMVSCMN---- 176
Y D NHKPE+AIAL+ F+ LCGF+P+E I + + E Q +IG++ + ++
Sbjct: 129 YPDANHKPEMAIALTPFQGLCGFRPVEEIVTFLTKVPEFQFLIGDNAAAQLKQSLSQDSE 188
Query: 177 --IEVFKEIFHAIMSAPQAQVEKQLCLLNETIHR 208
+ F +M + + V +QL LL + I +
Sbjct: 189 AVTSALRSCFSHLMKSEKKVVVEQLNLLVKRISQ 222
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 214 IATLCSLLNYKFGPPEAKLLIPVI--KDESCRFYLPPVADFGVAKIQV 259
+ TLC +L+Y P + +L P +D Y PPV DF V K++V
Sbjct: 305 VPTLCEMLSYTPSPSQDRLFPPARSPEDPYLSIYDPPVPDFTVMKVEV 352
>sp|Q9FZH5|MPI2_ARATH Mannose-6-phosphate isomerase 2 OS=Arabidopsis thaliana GN=PMI2
PE=1 SV=1
Length = 441
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 134/223 (60%), Gaps = 23/223 (10%)
Query: 7 IQTYEWGKIGLDSKVAQLVEA-AGGTVDKDKNYAELWLGTHPSGPS--------SILSQC 57
++ YEWGK+G +S VA+L EA G VD + YAE W+GTH SGPS + +C
Sbjct: 29 VKNYEWGKLGPESLVARLQEANTGQRVDSEIPYAEFWMGTHESGPSHVEFGSGHGVSDKC 88
Query: 58 SRSENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREF 117
+ L+SW+ +NP+ LG+ V+ ++G LPFL KVLSV KALSIQ HP+K A KLHRE
Sbjct: 89 MVT--LKSWVLDNPNLLGSKVVDKWGCDLPFLFKVLSVTKALSIQAHPNKALAEKLHRED 146
Query: 118 PDIYKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMVSCMNI 177
P +Y+D NHKPE+A+A++ F+ALCGF L+ +K+ I E+ ++G + +
Sbjct: 147 PLLYRDNNHKPEIALAVTPFQALCGFVTLKELKEVITNVPEITELVGSKAADQIFNVHEH 206
Query: 178 E-------VFKEIFHAIMSAPQAQVEKQLC-----LLNETIHR 208
+ V + IF +MSA + ++ + LL ET HR
Sbjct: 207 DEDERIKSVVRLIFTQLMSASNNETKQVVSRMKNRLLLETKHR 249
>sp|Q8HXX2|MPI_MACFA Mannose-6-phosphate isomerase OS=Macaca fascicularis GN=MPI PE=2
SV=3
Length = 423
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 124/214 (57%), Gaps = 8/214 (3%)
Query: 3 LSFSIQTYEWGKIGLDSKVAQLVEAAG--GTVDKDKNYAELWLGTHPSGPSSILSQCSRS 60
LS ++Q Y WGK+G +S+VA+L+ ++ + +DK YAELW+GTHP G + I
Sbjct: 9 LSCAVQQYAWGKMGYNSEVARLLASSDPLAQIAEDKPYAELWMGTHPRGDAKIFDNGISQ 68
Query: 61 ENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDI 120
+ L WI N LG+ V F LPFL KVLSV+ LSIQ HP+KE A KLH + P
Sbjct: 69 KTLGQWIAENQDSLGSKVKDTFNGNLPFLFKVLSVETPLSIQAHPNKELAEKLHLQAPQH 128
Query: 121 YKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMVSCMN---- 176
Y D NHKPE+AIAL+ F+ LCGF+P+E I +++ E Q +IG+ + M+
Sbjct: 129 YPDANHKPEMAIALTPFQGLCGFRPVEEIVTFLKKVPEFQFLIGDEAATHLKQTMSHDSQ 188
Query: 177 --IEVFKEIFHAIMSAPQAQVEKQLCLLNETIHR 208
+ F +M + + V +QL LL + I +
Sbjct: 189 AVASALQSCFSHLMKSEKKVVAEQLNLLVKRISQ 222
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 214 IATLCSLLNYKFGPPEAKLLIPVI--KDESCRFYLPPVADFGVAKIQV 259
+ TLC +L+Y + +L +P +D Y PPV DF + K++V
Sbjct: 305 VPTLCEMLSYTPSSSKDRLFLPTRSQEDPYLSIYDPPVPDFAIMKMEV 352
>sp|P34949|MPI_HUMAN Mannose-6-phosphate isomerase OS=Homo sapiens GN=MPI PE=1 SV=2
Length = 423
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 8/214 (3%)
Query: 3 LSFSIQTYEWGKIGLDSKVAQLVEAAG--GTVDKDKNYAELWLGTHPSGPSSILSQCSRS 60
LS ++Q Y WGK+G +S+VA+L+ ++ + +DK YAELW+GTHP G + IL
Sbjct: 9 LSCAVQQYAWGKMGSNSEVARLLASSDPLAQIAEDKPYAELWMGTHPRGDAKILDNRISQ 68
Query: 61 ENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDI 120
+ L WI N LG+ V F LPFL KVLSV+ LSIQ HP+KE A KLH + P
Sbjct: 69 KTLSQWIAENQDSLGSKVKDTFNGNLPFLFKVLSVETPLSIQAHPNKELAEKLHLQAPQH 128
Query: 121 YKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMVSCMN---- 176
Y D NHKPE+AIAL+ F+ LCGF+P+E I +++ E Q +IG+ + M+
Sbjct: 129 YPDANHKPEMAIALTPFQGLCGFRPVEEIVTFLKKVPEFQFLIGDEAATHLKQTMSHDSQ 188
Query: 177 --IEVFKEIFHAIMSAPQAQVEKQLCLLNETIHR 208
+ F +M + + V +QL LL + I +
Sbjct: 189 AVASSLQSCFSHLMKSEKKVVVEQLNLLVKRISQ 222
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 214 IATLCSLLNYKFGPPEAKLLIPVI--KDESCRFYLPPVADFGVAKIQV 259
+ TLC +L+Y + +L +P +D Y PPV DF + K +V
Sbjct: 305 VPTLCEMLSYTPSSSKDRLFLPTRSQEDPYLSIYDPPVPDFTIMKTEV 352
>sp|A5A6K3|MPI_PANTR Mannose-6-phosphate isomerase OS=Pan troglodytes GN=MPI PE=2 SV=1
Length = 423
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 8/214 (3%)
Query: 3 LSFSIQTYEWGKIGLDSKVAQLVEAAG--GTVDKDKNYAELWLGTHPSGPSSILSQCSRS 60
LS ++Q Y WGK+G +S+VA+L+ ++ + +DK YAELW+GTHP G + IL
Sbjct: 9 LSCAVQQYAWGKMGSNSEVARLLASSDPLAQIAEDKPYAELWMGTHPRGDAKILDNRISQ 68
Query: 61 ENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDI 120
+ L WI N LG+ V F LPFL KVLSV+ LSIQ HP+KE A KLH + P
Sbjct: 69 KTLSQWIAENQDSLGSKVKDTFNGNLPFLFKVLSVETPLSIQAHPNKELAEKLHLQAPQH 128
Query: 121 YKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMVSCMN---- 176
Y D NHKPE+AIAL+ F+ LCGF+P+E I +++ E Q +IG+ + M+
Sbjct: 129 YPDANHKPEMAIALTPFQGLCGFRPVEEIVTFLKKVPEFQFLIGDEAATHLKQTMSHDSQ 188
Query: 177 --IEVFKEIFHAIMSAPQAQVEKQLCLLNETIHR 208
+ F +M + + V +QL LL + I +
Sbjct: 189 AVASSLQSCFSHLMKSEKKVVVEQLNLLVKRISQ 222
Score = 32.0 bits (71), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 214 IATLCSLLNYKFGPPEAKLLIPVI--KDESCRFYLPPVADFGVAKIQV 259
+ TLC +L+Y + +L +P +D Y PPV DF + K +V
Sbjct: 305 VPTLCEMLSYTPSSSKDRLFLPTRSREDPYLSIYDPPVPDFTIMKTEV 352
>sp|P34948|MPI_CANAL Mannose-6-phosphate isomerase OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=PMI1 PE=1 SV=2
Length = 441
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 126/219 (57%), Gaps = 20/219 (9%)
Query: 8 QTYEWGKIGLDSKVAQLVEAAGG--TVDKDKNYAELWLGTHPSGPSSILSQCSRSENLES 65
Q Y+WGKIG S VAQ V + T+D+ K YAELW+GTHPS PS + ++ L
Sbjct: 14 QNYDWGKIGSSSAVAQFVHNSDPSITIDETKPYAELWMGTHPSVPSKAIDL--NNQTLRD 71
Query: 66 WIKNNPH-CLGTDVISQFG--EKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDIYK 122
+ P LG +I++FG ++LPFL KVLS++K LSIQ HP K+ +LH P Y
Sbjct: 72 LVTAKPQEYLGESIITKFGSSKELPFLFKVLSIEKVLSIQAHPDKKLGAQLHAADPKNYP 131
Query: 123 DENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMVSCM------- 175
D+NHKPE+AIA++ FE CGFKPL+++ K + EL +IG+ LV +S +
Sbjct: 132 DDNHKPEMAIAVTDFEGFCGFKPLDQLAKTLATVPELNEIIGQELVDEFISGIKLPAEVG 191
Query: 176 ------NIEVFKEIFHAIMSAPQAQVEKQLCLLNETIHR 208
N ++ +++F +M+ +++Q L E R
Sbjct: 192 SQDDVNNRKLLQKVFGKLMNTDDDVIKQQTAKLLERTDR 230
>sp|Q870Y1|MPI_NEUCR Mannose-6-phosphate isomerase OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=103E1.170 PE=3 SV=1
Length = 459
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 125/234 (53%), Gaps = 21/234 (8%)
Query: 1 MELSFSIQTYEWGKIGLDSKVAQLVEAAGGT----VDKDKNYAELWLGTHPSGPSSILSQ 56
++L + +YEWGK G S+ AQ A+ +D++K YAELW+GTHPS PS
Sbjct: 7 IQLQCGVNSYEWGKKGNSSRAAQFAAASLDDNEFKIDEEKPYAELWMGTHPSNPSK---D 63
Query: 57 CSRSENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHRE 116
L I++N L + ++ KLPFL KVLS+ KALSIQ HP+K+ A KLH
Sbjct: 64 KHTGRTLLELIQDNQALLSPAIAERYQNKLPFLFKVLSIQKALSIQAHPNKKLAEKLHAR 123
Query: 117 FPDIYKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMVSCM- 175
P Y D+NHKPE+AIA+S FE LCGF+PL+ I ++ L+ ++GE K+ V +
Sbjct: 124 DPKNYPDDNHKPEMAIAISDFEGLCGFRPLKEIAHFLDNVPALRQLVGEDKAKAFVETVK 183
Query: 176 -------------NIEVFKEIFHAIMSAPQAQVEKQLCLLNETIHRTGYSVIAT 216
N +V + F A+M++ +A + L ++ G T
Sbjct: 184 RNDGNESDEATAENKKVLQSAFGALMASSEADMTAAADKLVQSAKSAGADFTGT 237
>sp|O43014|MPI_SCHPO Mannose-6-phosphate isomerase OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=pmi40 PE=3 SV=1
Length = 412
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 124/200 (62%), Gaps = 9/200 (4%)
Query: 2 ELSFSIQTYEWGKIGLDSKVAQLVEAAGG-TVDKDKNYAELWLGTHPSGPSSILSQCSRS 60
L +++Y WGK+G +S A+L EA G VD + YAELW+G+HPSGPS ++
Sbjct: 3 RLKCDVKSYGWGKVGHESLAAKLAEAGYGFEVDPNTPYAELWMGSHPSGPSFVMQTGKPL 62
Query: 61 ENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDI 120
L + P +G V ++G++LPFL KVLS++K LSIQ HP K +LH+ P
Sbjct: 63 SELLT-----PETVGEKVYKKYGKQLPFLFKVLSINKVLSIQAHPDKPLGKQLHKTNPKE 117
Query: 121 YKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLV---KSMVSCMNI 177
YKD+NHKPE+A+AL++F+ALCGF+P+++I++ ++ L+ +GE V K V
Sbjct: 118 YKDDNHKPEMAVALTEFDALCGFRPVKQIEQFLDSIAPLREFVGEEAVRQFKGTVKQDER 177
Query: 178 EVFKEIFHAIMSAPQAQVEK 197
+ + +F+ +M + ++++
Sbjct: 178 KALETLFNELMHKDEKRIQE 197
>sp|Q76IQ2|MPI_CANGA Mannose-6-phosphate isomerase OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=PMI1
PE=3 SV=1
Length = 429
Score = 150 bits (379), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 124/215 (57%), Gaps = 19/215 (8%)
Query: 1 MELSFSIQTYEWGKIGLDSKVAQLVEAAGGTV--DKDKNYAELWLGTHPSGPSSILSQCS 58
L Q Y+WGKIG S VA+ + +V D+ K YAELW+GTH PS ++ +
Sbjct: 7 FRLDAGYQQYDWGKIGSSSAVAKFAAHSDPSVKIDETKPYAELWMGTHSKLPS--VNHET 64
Query: 59 RSENLESWIKNNPHCLGTDVISQF--GEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHRE 116
++ + KN+ +G DVI++F +LPFL KVLS++K LSIQ HP KE KLH E
Sbjct: 65 KATLNDILAKNSQELIGEDVINKFKSTNELPFLFKVLSIEKVLSIQAHPDKELGKKLHME 124
Query: 117 FPDIYKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMV---- 172
P Y D+NHKPE+A+A+++FE CGFKPLE I +E E + V+G+ + +
Sbjct: 125 DPKNYPDDNHKPEMAVAITEFEGFCGFKPLEEIADELETIPEFRDVVGDEVANEFIQNYK 184
Query: 173 --------SCM-NIEVFKEIFHAIMSAPQAQVEKQ 198
+C N ++ +++F +M+AP +EK
Sbjct: 185 TGVENSSSACANNKKLLQKVFEKVMTAPCDILEKN 219
>sp|Q9GP38|MPI_ECHMU Probable mannose-6-phosphate isomerase OS=Echinococcus
multilocularis GN=PMIH PE=2 SV=1
Length = 433
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 105/162 (64%), Gaps = 6/162 (3%)
Query: 1 MELSFSIQTYEWGKIGLDSKVAQLVEAAGGTVD---KDKNYAELWLGTHPSGPSSILSQC 57
+ L + Q Y+WGK+G++S V +L + A D D YAELW+GTHPSG S +
Sbjct: 2 LRLKCASQRYDWGKVGVNSIVYKL-QVASENPDISHVDLPYAELWMGTHPSGSSCLWDNP 60
Query: 58 SRSENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREF 117
+ L + I+ NP LG + FG +LPFL KVLSV KALSIQ HP K+ AV+LH E
Sbjct: 61 HVT--LAAHIQENPASLGKPSLIYFGRRLPFLFKVLSVAKALSIQAHPDKKMAVRLHAEQ 118
Query: 118 PDIYKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKEL 159
PD+YKD +HKPE+AIAL+ FEAL GF+PL +I I+ EL
Sbjct: 119 PDLYKDGSHKPEMAIALTDFEALLGFRPLNQILAFIQAFPEL 160
>sp|Q8J093|MPI_PICAD Mannose-6-phosphate isomerase OS=Pichia angusta (strain ATCC 26012
/ NRRL Y-7560 / DL-1) GN=PMI40 PE=3 SV=1
Length = 426
Score = 147 bits (370), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 131/228 (57%), Gaps = 16/228 (7%)
Query: 8 QTYEWGKIGLDSKVAQ---LVEAAGGTVDKDKNYAELWLGTHPSGPSSILSQCSRSENLE 64
Q Y+WGK+G S VA+ L + +++++K YAELW+GTHPS P+ +S R+ L
Sbjct: 15 QNYDWGKLGSTSAVARFAKLNDPENVSIEEEKPYAELWMGTHPSVPT--VSAQDRTP-LR 71
Query: 65 SWIKNNPH-CLGTDVISQFGEK--LPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDIY 121
++ P LG D+I +FG K +PFL KVLS+ K LSIQ HP K A +LH P Y
Sbjct: 72 DLVRAAPEEMLGQDIIDKFGSKEGIPFLFKVLSIRKVLSIQAHPDKALARQLHASDPKHY 131
Query: 122 KDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMVSCMNI---- 177
D+NHKPE+A+A++ FEA CGFKPL I +++ E + ++G+ +V S ++
Sbjct: 132 PDDNHKPEMAVAITDFEAFCGFKPLAEIDALLQKIPEFRELVGDDVVAEFHSGIDSSDVA 191
Query: 178 ---EVFKEIFHAIMSAPQAQVEKQLCLLNETIHRTGYSVIATLCSLLN 222
++ +++F +M++P+++ E L E TL L+
Sbjct: 192 GKKKLLQKVFSRVMNSPESKFEPLAARLVERTKSDPQLFGETLADLIQ 239
>sp|P29952|MPI_YEAST Mannose-6-phosphate isomerase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PMI40 PE=1 SV=4
Length = 429
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 118/216 (54%), Gaps = 21/216 (9%)
Query: 1 MELSFSIQTYEWGKIGLDSKVAQLVEAAGGTV--DKDKNYAELWLGTHPSGPSSILSQCS 58
L Q Y+WGKIG S VAQ + +V ++DK YAELW+GTH PS
Sbjct: 6 FRLDAGYQQYDWGKIGSSSAVAQFAAHSDPSVQIEQDKPYAELWMGTHSKMPSY---NHE 62
Query: 59 RSENLESWIKNNPHC-LGTDVISQF--GEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHR 115
E+L I NP LG D+I +F +LPFL KVLS++K LSIQ HP K LH
Sbjct: 63 SKESLRDIISKNPSAMLGKDIIDKFHATNELPFLFKVLSIEKVLSIQAHPDKALGKILHA 122
Query: 116 EFPDIYKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMVSCM 175
+ P Y D+NHKPE+AIA++ FE CGFKPL+ I ++ EL+ ++GE ++ + +
Sbjct: 123 QDPKNYPDDNHKPEMAIAVTDFEGFCGFKPLQEIADELKRIPELRNIVGEETSRNFIENI 182
Query: 176 -------------NIEVFKEIFHAIMSAPQAQVEKQ 198
N ++ + +F +M+A +++ Q
Sbjct: 183 QPSAQKGSPEDEQNKKLLQAVFSRVMNASDDKIKIQ 218
>sp|Q9HFU4|MPI_CRYNJ Mannose-6-phosphate isomerase OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=MAN1 PE=3 SV=2
Length = 434
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 127/231 (54%), Gaps = 33/231 (14%)
Query: 1 MELSFSIQTYEWGKIGLDSKVAQLVEAA--GGTVDKDKNYAELWLGTHPSGPSSILSQCS 58
++S I +Y+WGK G S AQL + ++D+DK YAELW+GTHP+ PS +
Sbjct: 6 FKISPGINSYDWGKKGSASLAAQLATTSIPDFSIDEDKAYAELWMGTHPNNPSRLSDNTL 65
Query: 59 RSENLESWIKNNPHCLGTDVISQFGE----KLPFLLKVLSVDKALSIQMHPSKEQAVKLH 114
SE+L K++P +G+ V S+F + LPFL KVLS+ ALSIQ HP K A KL
Sbjct: 66 LSEHL----KSHPELIGSSVSSKFEDCKDGSLPFLFKVLSIGTALSIQAHPDKPLAKKLF 121
Query: 115 REFPDIYKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMVSC 174
E PD+YKD NHKPE+AIAL+ F A F PL + ++ ELQ + SL +S+ S
Sbjct: 122 DEKPDVYKDPNHKPEMAIALTPFLAFLNFLPLSVLLLHLLTVPELQEFVDSSLTESLASS 181
Query: 175 MNI-----------------------EVFKEIFHAIMSAPQAQVEKQLCLL 202
+ + ++ K+IF A+MSA + VE+ + L
Sbjct: 182 LGLPTSQPPDTSLFKPTESPATAEQKDILKQIFAALMSADKKLVEEAISKL 232
Score = 37.7 bits (86), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 172 VSCMNIEVFKEIFHAIMSA--PQAQVEKQL--CL-LNETIHRTGYSV----IATLCSLLN 222
V +N+ K A + A P A +E + C+ ++ + R G + + TL S+L
Sbjct: 269 VFLLNVVELKRGEAAFLGANEPHAYIEGDIIECMATSDNVVRAGLTPKLRDVDTLVSMLT 328
Query: 223 YKFGPPEAKLLIPVI---KDESCRFYLPPVADFGVAKIQVS 260
Y+ P +LL P D++ + Y PP+A+F V + ++S
Sbjct: 329 YEAAPGNKQLLQPTPFQKGDDTTKLYDPPIAEFSVLRTELS 369
>sp|Q75AB5|MPI_ASHGO Mannose-6-phosphate isomerase OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PMI1 PE=3
SV=1
Length = 429
Score = 138 bits (347), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 104/184 (56%), Gaps = 10/184 (5%)
Query: 1 MELSFSIQTYEWGKIGLDSKVAQLVEAAGGTV--DKDKNYAELWLGTHPSGPSSILSQCS 58
L Q Y+WGKIG S VAQ + +V ++DK YAELW+GTH PS
Sbjct: 6 FRLDAGYQQYDWGKIGSSSAVAQYAANSDPSVQIEEDKPYAELWMGTHHKVPSR---HHD 62
Query: 59 RSENLESWIKNNPH-CLGTDVISQFGEK--LPFLLKVLSVDKALSIQMHPSKEQAVKLHR 115
L I NP LG+ + +F + LPFL KVLS++K LSIQ HP K +LH
Sbjct: 63 TKVALSDLIAANPEGMLGSGNVEKFHSRKDLPFLFKVLSIEKVLSIQAHPDKNLGRRLHI 122
Query: 116 EFPDIYKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVKSMVSCM 175
+ P Y D+NHKPE+AIA+S FE CGFKPLE + + ++ E ++++GE + C
Sbjct: 123 QDPKNYPDDNHKPEMAIAISDFEGFCGFKPLEELAEELQRIPEFRSLVGEDIAAQF--CA 180
Query: 176 NIEV 179
I+V
Sbjct: 181 GIKV 184
>sp|Q66WM4|MPI_ASPFU Mannose-6-phosphate isomerase OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pmi1 PE=2
SV=2
Length = 457
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 102/168 (60%), Gaps = 6/168 (3%)
Query: 1 MELSFSIQTYEWGKIGLDSKVAQLVEA---AGGTVDKDKNYAELWLGTHPSGPSSILSQC 57
+ L + +Y+WGK+G +S A+ + ++ DK YAELW+GTHPS PS L
Sbjct: 7 LRLQCGVNSYDWGKVGHESAAAKYAATTAASDFSIQSDKPYAELWMGTHPSLPSKDLET- 65
Query: 58 SRSENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREF 117
L +++N + +V ++G KLPFL KVLS+ KALSIQ HP+K+ A KLH
Sbjct: 66 --QRTLLDMVQDNQALISQEVSERYGGKLPFLFKVLSIRKALSIQAHPNKKLAEKLHARD 123
Query: 118 PDIYKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGE 165
P Y D+NHKPE+ IA++ FE LCGF+PL I ++ L+ ++GE
Sbjct: 124 PRNYPDDNHKPEMTIAITPFEGLCGFRPLVEIIHFLKAVAPLRQLVGE 171
>sp|P29951|MPI_EMENI Mannose-6-phosphate isomerase OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=manA
PE=3 SV=2
Length = 461
Score = 134 bits (336), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 101/167 (60%), Gaps = 6/167 (3%)
Query: 1 MELSFSIQTYEWGKIGLDSKVAQLVEA---AGGTVDKDKNYAELWLGTHPSGPSSILSQC 57
+ L + +Y+WG++G +S A+ A + T++ DK YAELW+GTHPS PS
Sbjct: 6 LRLQCGVNSYDWGRVGPESAAAKYAAATAPSDFTIEADKPYAELWMGTHPSLPSK---DV 62
Query: 58 SRSENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREF 117
L +++N + +V ++G KLPFL KVLS+ KALSIQ HP+K+ A LH
Sbjct: 63 ETQRTLLDMVQDNLALMSPEVSERYGGKLPFLFKVLSIRKALSIQAHPNKKLAEALHARD 122
Query: 118 PDIYKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIG 164
P Y D+NHKPE+ IA++ FE LCGF+PL I ++ L+ +IG
Sbjct: 123 PRNYPDDNHKPEMTIAITPFEGLCGFRPLAEIVHFLKAVAPLRYLIG 169
>sp|Q54PA0|MPI_DICDI Probable mannose-6-phosphate isomerase OS=Dictyostelium discoideum
GN=mpi PE=3 SV=1
Length = 452
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 111/218 (50%), Gaps = 21/218 (9%)
Query: 8 QTYEWGKIGLDSKVAQLVEA----AGGTVDKDKNYAELWLGTHPSGPSSI---------- 53
Q YEWGK G +S VA+L++ + + YAELW+G H S PS +
Sbjct: 29 QNYEWGKYGSNSTVAKLLKGYAKECSDIIKETIPYAELWMGDHVSAPSKVEYKNKELKLR 88
Query: 54 ----LSQCSRSENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQ 109
Q +E + ++ G V +FG PFL KVLS+ ALSIQ HP +
Sbjct: 89 EYIDTVQKEINEKSSTSSSSSSSIRGEIVEKRFGNDFPFLFKVLSIRTALSIQAHPDSQL 148
Query: 110 AVKLHREFPDIYKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGESLVK 169
A L +++P+IYKD HKPE+AIA + FEALC F+PL I+ I+ E + + +L+K
Sbjct: 149 AQVLFKKYPNIYKDPYHKPEIAIATTPFEALCSFRPLSEIQSFIDTIPEFKNSLPNNLIK 208
Query: 170 SMVSCMNIEVFKEIFHAIMSAPQAQVEKQLCLLNETIH 207
+ C E K I +++ A + L LN ++
Sbjct: 209 -LDDCK--EYLKSIVTSLLKADGLLISNNLKELNNRLN 243
>sp|P34650|MPI_CAEEL Probable mannose-6-phosphate isomerase OS=Caenorhabditis elegans
GN=ZK632.4 PE=3 SV=3
Length = 416
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 110/203 (54%), Gaps = 14/203 (6%)
Query: 1 MELSFSIQTYEWGKIGLDSKVAQLVEAAGG--TVDKDKNYAELWLGTHPSGPSSILSQCS 58
++L ++ Y WG G S L G +DKDK YAE W+GTH +GP+ ++
Sbjct: 3 LKLKCTVNNYAWGPKGNSSMAGSLALDGGHIPNLDKDKPYAEFWVGTHANGPAHVIE--- 59
Query: 59 RSENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFP 118
+ L+ + +P G L FL KVLSV LSIQ+HP+KEQ LH P
Sbjct: 60 KDIALKQLLATSPELQG----KHEKGNLSFLFKVLSVLGPLSIQIHPTKEQGKLLHATDP 115
Query: 119 DIYKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIGE---SLVKSMVSC- 174
Y D+NHKPE+AIAL++FE L GF+ +I + ++ E+Q ++ E S + S+ S
Sbjct: 116 KNYPDDNHKPEIAIALTEFELLSGFRQHSQISEYLKLYSEIQELLTEEEKSQIDSLGSYG 175
Query: 175 -MNIEVFKEIFHAIMSAPQAQVE 196
+ +V K+IF I P+ +++
Sbjct: 176 ESSAQVLKKIFSRIWRTPKEKLQ 198
>sp|P25081|MANA_SALTY Mannose-6-phosphate isomerase OS=Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720) GN=manA PE=1 SV=2
Length = 391
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 102/214 (47%), Gaps = 25/214 (11%)
Query: 6 SIQTYEWGKIGLDSKVAQLVEAAGGTVDKDKNYAELWLGTHPSGPSSILSQCSRSENLES 65
S+Q Y WG SK A L E G + + AELW+G HP S I + + +L
Sbjct: 7 SVQNYAWG-----SKTA-LTELYGIANPQQQPMAELWMGAHPKSSSRITTANGETVSLRD 60
Query: 66 WI-KNNPHCLGTDVISQFGEKLPFLLKVLSVDKALSIQMHP---------SKEQAVKLHR 115
I KN LG V ++FGE LPFL KVL + LSIQ+HP +KE A +
Sbjct: 61 AIEKNKTAMLGEAVANRFGE-LPFLFKVLCAAQPLSIQVHPNKRNSEIGFAKENAAGIPM 119
Query: 116 EFPDI-YKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIG-ESLVKSMVS 173
+ + YKD NHKPEL AL+ F A+ F+ I LQ V G S + +
Sbjct: 120 DAAERNYKDPNHKPELVFALTPFLAMNAFREFSDI------VSLLQPVAGAHSAIAHFLQ 173
Query: 174 CMNIEVFKEIFHAIMSAPQAQVEKQLCLLNETIH 207
N E ++F ++++ + + L +L ++
Sbjct: 174 VPNAERLSQLFASLLNMQGEEKSRALAVLKAALN 207
>sp|P00946|MANA_ECOLI Mannose-6-phosphate isomerase OS=Escherichia coli (strain K12)
GN=manA PE=1 SV=1
Length = 391
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 6 SIQTYEWGKIGLDSKVAQLVEAAGGTVDKDKNYAELWLGTHPSGPSSILSQCSRSENLES 65
S+Q Y WG SK A L E G + AELW+G HP S + + +L
Sbjct: 7 SVQNYAWG-----SKTA-LTELYGMENPSSQPMAELWMGAHPKSSSRVQNAAGDIVSLRD 60
Query: 66 WIKNNPHC-LGTDVISQFGEKLPFLLKVLSVDKALSIQMHP---------SKEQAVKLHR 115
I+++ LG V +FGE LPFL KVL + LSIQ+HP +KE A +
Sbjct: 61 VIESDKSTLLGEAVAKRFGE-LPFLFKVLCAAQPLSIQVHPNKHNSEIGFAKENAAGIPM 119
Query: 116 EFPDI-YKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKELQAVIG-ESLVKSMVS 173
+ + YKD NHKPEL AL+ F A+ F+ I LQ V G + +
Sbjct: 120 DAAERNYKDPNHKPELVFALTPFLAMNAFREFSEI------VSLLQPVAGAHPAIAHFLQ 173
Query: 174 CMNIEVFKEIFHAIMSAPQAQVEKQLCLLNETI 206
+ E E+F ++++ + + L +L +
Sbjct: 174 QPDAERLSELFASLLNMQGEEKSRALAILKSAL 206
>sp|Q83KZ1|MANA_SHIFL Mannose-6-phosphate isomerase OS=Shigella flexneri GN=manA PE=3
SV=4
Length = 391
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 6 SIQTYEWGKIGLDSKVAQLVEAAGGTVDKDKNYAELWLGTHPSGPSSILSQCSRSENLES 65
S+Q Y WG SK A L E G + AELW+G HP S + + +L
Sbjct: 7 SVQNYAWG-----SKTA-LTELYGMENPSSQPMAELWMGAHPKSSSRVQNAAGDIVSLRD 60
Query: 66 WIKNNPHC-LGTDVISQFGEKLPFLLKVLSVDKALSIQMHP---------SKEQAVKLHR 115
I+++ LG V +FGE LPFL KVL + LSIQ+HP +KE A +
Sbjct: 61 VIESDKSTLLGEAVAKRFGE-LPFLFKVLCAAQPLSIQVHPNKHNSEIGFAKENAAGIPM 119
Query: 116 EFPDI-YKDENHKPELAIALSKFEALCGFKPLERI 149
+ + YKD NHKPEL AL+ F A+ F+ I
Sbjct: 120 DAAERNYKDPNHKPELVFALTPFLAMNAFREFSEI 154
>sp|O31646|MANA1_BACSU Mannose-6-phosphate isomerase ManA OS=Bacillus subtilis (strain
168) GN=manA PE=3 SV=1
Length = 315
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Query: 29 GGTVDKDKNY-------AELW-LGTHPSGPSSILSQCSRSENLESWIKNNPHCLGTDVIS 80
GGT D Y E W H +G S + + + L +++ H G
Sbjct: 18 GGTALADFGYTIPSQRTGECWAFAAHQNGQSVVQNGMYKGFTLSELWEHHRHLFG----Q 73
Query: 81 QFGEKLPFLLKVLSVDKALSIQMHPSKEQA 110
G++ P L K+L D+ LS+Q+HP+ E A
Sbjct: 74 LEGDRFPLLTKILDADQDLSVQVHPNDEYA 103
>sp|P39841|MANA3_BACSU Putative mannose-6-phosphate isomerase YvyI OS=Bacillus subtilis
(strain 168) GN=yvyI PE=1 SV=1
Length = 316
Score = 39.3 bits (90), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 29 GGTVDKDK--------NYAELW-LGTHPSGPSSILSQCSRSENL-ESWIKNNPHCLGTDV 78
GGT +D+ + E W + HP GPS++ + + + L E W ++ G +
Sbjct: 18 GGTALRDRFGYSIPSESTGECWAISAHPKGPSTVANGPYKGKTLIELWEEHREVFGGVE- 76
Query: 79 ISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDIYKDENHKPELA 131
G++ P L K+L V + SI++HP D Y EN + EL
Sbjct: 77 ----GDRFPLLTKLLDVKEDTSIKVHPD------------DYYAGENEEGELG 113
>sp|O05511|MANA2_BACSU Probable mannose-6-phosphate isomerase GmuF OS=Bacillus subtilis
(strain 168) GN=gmuF PE=1 SV=1
Length = 315
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 22 AQLVEAAGGTVDKDKNYAELW-LGTHPSGPSSILSQCSRSENLESWIKNNPHCLGTDVIS 80
+L +A G + K E W + H G SS+ + + L+ K++P G
Sbjct: 19 TKLRDAFGYAIPSQKT-GECWAVSAHAHGSSSVKNGPLAGKTLDQVWKDHPEIFGFPD-- 75
Query: 81 QFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDIYKDE 124
G+ P L+K+L + LS+Q+HP + A KLH E D+ K E
Sbjct: 76 --GKVFPLLVKLLDANMDLSVQVHPDDDYA-KLH-ENGDLGKTE 115
>sp|Q9UW12|PALA_CANAL pH-response regulator protein palA/RIM20 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=RIM20 PE=3 SV=2
Length = 785
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 151 KNIEETKELQAVIGESLVKSMVSCM-------NIEVFKEIF-HAIMSAPQAQVEKQLCLL 202
K + + KEL+ +IG S+VKS++ N E+FKE+ + I+ QA E+Q
Sbjct: 329 KIVPQEKELKTIIGVSMVKSIIPEAFEQKPESNTEIFKELLPYVIIHVAQAMRERQ---- 384
Query: 203 NETIHRTGYSVIATLCSLL 221
+E + ++ I++L ++L
Sbjct: 385 DEYVQTKFHTPISSLNNML 403
>sp|A5DKW3|DRS1_PICGU ATP-dependent RNA helicase DRS1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DRS1 PE=3 SV=2
Length = 705
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 93 LSVDKALSIQMHPSKEQAVKLHREFPDIYKDENHKPEL 130
LS+DK + I ++P K+ A KL +EF I K E+ KP L
Sbjct: 397 LSLDKPVRIMVNPPKQAASKLVQEFVRIRKREHLKPAL 434
>sp|Q80XK6|ATG2B_MOUSE Autophagy-related protein 2 homolog B OS=Mus musculus GN=Atg2b PE=1
SV=3
Length = 2075
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 47 PSGPSSILSQCSRSENLESWIKNNPHCLGTDVISQFGEKLPFLLKV--LSVDKALSIQMH 104
P G + LS + L+ IK NP C D+ ++L LL+ L+ + ++ M+
Sbjct: 656 PQGNQARLSSVPQKAELQ--IKLNPVCCELDI--SIVDRLNSLLQPQKLTTVEMMASHMY 711
Query: 105 PSKEQAVKLHREFPDIYKDENHKP 128
S + + LH+ F +++ D++H P
Sbjct: 712 ASYNKHISLHKAFTEVFLDDSHSP 735
>sp|Q2LD49|VM3TM_TRIST Zinc metalloproteinase-disintegrin TSV-DM OS=Trimeresurus
stejnegeri PE=1 SV=1
Length = 621
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 18/89 (20%)
Query: 10 YEWGKIGLDSKVAQLVEAA---------GGTVDKD----KNYAELWLGTHPSGPSSILSQ 56
Y G + +K+ LV A G DKD + A + GT S + S
Sbjct: 315 YSAGIVQDHNKIHHLVAIAMAHELGHNLGINHDKDTCTCRAKACVMAGTISCDASYLFSD 374
Query: 57 CSRSENLESWIKNNPHC-----LGTDVIS 80
CSR E+ E IKN P C L TDV+S
Sbjct: 375 CSRQEHREFLIKNMPQCILKKPLKTDVVS 403
>sp|Q9Z7H2|RS4_CHLPN 30S ribosomal protein S4 OS=Chlamydia pneumoniae GN=rpsD PE=3 SV=1
Length = 209
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 153 IEETKELQAVIGESLVKSMVSCMNIEVFKEIFHAIMSAPQAQVEKQLCLLNETIHRTGYS 212
+EE ++L+A G + K +V + FKE+ H + Q +E+ C L+ ++R G++
Sbjct: 51 LEEKQKLKACYGMIMEKQLV-----KAFKEVIHKQGNVAQMFLERFECRLDNMVYRMGFA 105
>sp|Q252M1|RS4_CHLFF 30S ribosomal protein S4 OS=Chlamydophila felis (strain Fe/C-56)
GN=rpsD PE=3 SV=1
Length = 209
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 153 IEETKELQAVIGESLVKSMVSCMNIEVFKEIFHAIMSAPQAQVEKQLCLLNETIHRTGYS 212
+EE ++L+A G L K +V + FKE+ H S + +E+ C L+ ++R G++
Sbjct: 51 LEEKQKLKACYGMILEKQLV-----KAFKEVVHKQGSVTKMFLERFECRLDNMVYRMGFA 105
>sp|Q9PJB7|RS4_CHLMU 30S ribosomal protein S4 OS=Chlamydia muridarum (strain MoPn /
Nigg) GN=rpsD PE=3 SV=1
Length = 209
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 153 IEETKELQAVIGESLVKSMVSCMNIEVFKEIFHAIMSAPQAQVEKQLCLLNETIHRTGYS 212
+EE ++L+A G L K +V + +KE+ H + Q +EK C L+ ++R G++
Sbjct: 51 LEEKQKLKACYGMILEKQLV-----KAYKEVVHKQGNVAQMFLEKFECRLDNIVYRLGFA 105
>sp|Q59935|MANA_STRMU Mannose-6-phosphate isomerase OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=pmi PE=3 SV=2
Length = 316
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 39 AELW-LGTHPSGPSSILSQCSRSENLESWIKNNPHCLGTDVISQFGEKLPFLLKVLSVDK 97
E W + HP+G S + + + L+ + G S F P L K+L +
Sbjct: 35 GEYWAISAHPNGVSVVKNGVYKGVPLDELYAEHRELFGNSKSSVF----PLLTKILDAND 90
Query: 98 ALSIQMHPSKEQAVK 112
LS+Q+HP A++
Sbjct: 91 WLSVQVHPDNAYALE 105
>sp|Q96BY7|ATG2B_HUMAN Autophagy-related protein 2 homolog B OS=Homo sapiens GN=ATG2B PE=1
SV=5
Length = 2078
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 47 PSGPSSILSQCSRSENLESWIKNNPHCLGTDVISQFGEKLPFLLKV--LSVDKALSIQMH 104
P G + LS L+ IK NP C D+ ++L LL+ L+ + ++ M+
Sbjct: 657 PQGNQARLSSVPHKAELQ--IKLNPVCCELDI--SIVDRLNSLLQPQKLATVEMMASHMY 712
Query: 105 PSKEQAVKLHREFPDIYKDENHKP 128
S + + LH+ F +++ D++H P
Sbjct: 713 TSYNKHISLHKAFTEVFLDDSHSP 736
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,102,242
Number of Sequences: 539616
Number of extensions: 3916674
Number of successful extensions: 10584
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 10497
Number of HSP's gapped (non-prelim): 56
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)