Query psy12637
Match_columns 270
No_of_seqs 177 out of 1245
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 15:43:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12637.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12637hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pmi_A PMI, phosphomannose iso 100.0 6.5E-63 2.2E-67 475.1 19.4 258 1-260 6-365 (440)
2 2wfp_A Mannose-6-phosphate iso 100.0 9.2E-62 3.1E-66 461.8 17.5 248 1-262 5-334 (394)
3 1zx5_A Mannosephosphate isomer 100.0 5.9E-49 2E-53 361.8 -4.6 213 1-261 9-239 (300)
4 1qwr_A Mannose-6-phosphate iso 100.0 1.5E-46 5.2E-51 348.4 0.1 230 1-262 9-261 (319)
5 2be4_A Hypothetical protein LO 21.7 2.7E+02 0.0093 22.4 7.3 49 178-226 216-271 (272)
6 3lag_A Uncharacterized protein 21.6 47 0.0016 24.0 2.1 22 247-268 12-33 (98)
7 1wjz_A 1700030A21RIK protein; 19.6 41 0.0014 24.0 1.4 11 97-107 38-48 (94)
8 3nxa_A Protein S100-A16; S100 16.1 2.4E+02 0.0082 20.1 5.1 48 176-223 32-83 (100)
9 3uss_A Putative uncharacterize 13.0 5.8E+02 0.02 21.2 8.8 27 243-269 64-90 (211)
10 3kj0_B BCL-2-like protein 11; 12.5 9.5 0.00033 21.6 -2.8 8 126-133 4-11 (27)
No 1
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=100.00 E-value=6.5e-63 Score=475.05 Aligned_cols=258 Identities=37% Similarity=0.697 Sum_probs=223.9
Q ss_pred CeeeccccccccCCCCCChHHHHHHHhhCC--CCCCCCCceeeeeeecCCCCeEEccCCCCCccHHHHHHhCCC-cCCch
Q psy12637 1 MELSFSIQTYEWGKIGLDSKVAQLVEAAGG--TVDKDKNYAELWLGTHPSGPSSILSQCSRSENLESWIKNNPH-CLGTD 77 (270)
Q Consensus 1 ~~L~~~~~~y~WG~~g~~s~i~~l~~~~~~--~~~~~~p~aE~W~g~hp~~pS~v~~~~~~~~~L~~~i~~~p~-~LG~~ 77 (270)
|+|+|.+|+|+|||.|+.+++++|.+.+++ .+++++||||+|||+||++||+|.++ .|.+|.++|+++|. +||..
T Consensus 6 ~~l~p~~~~~~WGg~Gs~~l~~~l~~~~~~~~~~~~~~~~aE~W~g~hp~~~S~v~~~--~G~~L~~~i~~~~~~llG~~ 83 (440)
T 1pmi_A 6 FRIQCGYQNYDWGKIGSSSAVAQFVHNSDPSITIDETKPYAELWMGTHPSVPSKAIDL--NNQTLRDLVTAKPQEYLGES 83 (440)
T ss_dssp EEEEECEECCTTBEEGGGSHHHHHHHHHCTTSCCCTTSEECEEEESCCTTSCEEETTT--TTEEHHHHHHHCHHHHTCHH
T ss_pred EEeecccCcCCCCCCchHHHHHHHhcCCCccccCCCCCCEEEEEEEecCCCCeEEeCC--CCCCHHHHHHhChHhhcCch
Confidence 589999999999999998999999886543 45567899999999999999999874 47899999999975 99999
Q ss_pred hHhhhcC--CCcchhhcccCCCCCccccCCCHHHHHHhhccCCCCCCCCCCCceeEEEccCceecccCCchHHHHhhhhC
Q psy12637 78 VISQFGE--KLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDIYKDENHKPELAIALSKFEALCGFKPLERIKKNIEE 155 (270)
Q Consensus 78 ~~~~fg~--~lP~L~KvLs~~~~LSIQvHPd~~~A~~~~~~~p~~Y~D~n~KpE~~~aLt~f~~l~Gfr~~~ei~~~l~~ 155 (270)
+.++||. +|||||||||++++|||||||||++|+++|+++|+||||+||||||||||++|+++||||+.+||.++|++
T Consensus 84 ~~~~fg~~~~~P~L~K~Lda~~~LSiQvHPd~~~A~~~~~~~p~~YkD~ngKpE~~y~L~~~~~~~Gf~~~~ei~~~l~~ 163 (440)
T 1pmi_A 84 IITKFGSSKELPFLFKVLSIEKVLSIQAHPDKKLGAQLHAADPKNYPDDNHKPEMAIAVTDFEGFCGFKPLDQLAKTLAT 163 (440)
T ss_dssp HHHHHCCSSSCSEEEEEEEESSCCCEEECCCHHHHHHHHHHCTTTCCSSCCCCEEEEESSCEEEEEEECCHHHHHHHHHH
T ss_pred hhhhcCCcccCcEEEhhhccCCCCceeeCcCHHHHHHhhcccccccCCCCCCcEEEEEccchhhhhcCCcHHHHHHHHhh
Confidence 9999998 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhhhHHHHHhc-------------CCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHh---------------
Q psy12637 156 TKELQAVIGESLVKSMVSC-------------MNIEVFKEIFHAIMSAPQAQVEKQLCLLNETIH--------------- 207 (270)
Q Consensus 156 ~~el~~~i~~~~~~~~~~~-------------~~~~~l~~~f~~lm~~~~~~~~~~~~~l~~rl~--------------- 207 (270)
.|+|+.+++.....++... .+.++|+.+|+.+|+++++++.+++..|++|+.
T Consensus 164 ~pel~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~~f~~lm~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~ 243 (440)
T 1pmi_A 164 VPELNEIIGQELVDEFISGIKLPAEVGSQDDVNNRKLLQKVFGKLMNTDDDVIKQQTAKLLERTDREPQVFKDIDSRLPE 243 (440)
T ss_dssp CHHHHHHHCHHHHHHHHHHCCCSCCTTSHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHCHHHHHTTCTTHHH
T ss_pred chhhhhhhchhhhhhhhhhcccccccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhccccccccchHHH
Confidence 9999999987666665431 125789999999999999999887777654321
Q ss_pred ------------------c-----------------------------------------CC----cccHHHHhhhcccc
Q psy12637 208 ------------------R-----------------------------------------TG----YSVIATLCSLLNYK 224 (270)
Q Consensus 208 ------------------~-----------------------------------------aG----~iDv~~L~~~l~~~ 224 (270)
. +| |+||++||+||+|+
T Consensus 244 ~i~~L~~~yP~D~G~~~~~~lLN~v~L~pGea~flpAg~~HAYl~G~~vE~Ma~SDNV~RaGlTpK~~Dv~~Ll~~l~~~ 323 (440)
T 1pmi_A 244 LIQRLNKQFPNDIGLFCGCLLLNHVGLNKGEAMFLQAKDPHAYISGDIIECMAASDNVVRAGFTPKFKDVKNLVEMLTYS 323 (440)
T ss_dssp HHHHHHHHSTTCTHHHHTTTTEEEEEECTTCEEEECTTCCEEEEEEEEEEEEESCCCCEEEESCSSCCCHHHHHHHCCCC
T ss_pred HHHHHHHHCCCCccceehhhhcceEecCCCCEEecCCCCccccCCCcEEEEeccCCcEEecCCCccccCHHHHHHhcccc
Confidence 1 23 89999999999999
Q ss_pred cCCCCcccccceec------CCCeEEecCCCCCeeEEEEEec
Q psy12637 225 FGPPEAKLLIPVIK------DESCRFYLPPVADFGVAKIQVS 260 (270)
Q Consensus 225 ~~~~~~~~~~p~~~------~~~~~~y~~p~~eF~l~~~~l~ 260 (270)
+.+|+.....|... +..+.+|.||++||+|.++++.
T Consensus 324 ~~~~~~~~~~p~~~~~~~~~~~~~~~y~~P~~eF~v~~~~~~ 365 (440)
T 1pmi_A 324 YESVEKQKMPLQEFPRSKGDAVKSVLYDPPIAEFSVLQTIFD 365 (440)
T ss_dssp CCCGGGGBCCCBCCTTEEESCSEEEEECCSSSSCEEEEEECC
T ss_pred CCCcccccccceeccccccCCcceEEECCCCCeEEEEEEEec
Confidence 88876644444432 1136789999999999999997
No 2
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=100.00 E-value=9.2e-62 Score=461.78 Aligned_cols=248 Identities=29% Similarity=0.494 Sum_probs=208.5
Q ss_pred CeeeccccccccCCCCCChHHHHHHHhhCCCCCCCCCceeeeeeecCCCCeEEccC-CCCCccHHHHHHhCCC-cCCchh
Q psy12637 1 MELSFSIQTYEWGKIGLDSKVAQLVEAAGGTVDKDKNYAELWLGTHPSGPSSILSQ-CSRSENLESWIKNNPH-CLGTDV 78 (270)
Q Consensus 1 ~~L~~~~~~y~WG~~g~~s~i~~l~~~~~~~~~~~~p~aE~W~g~hp~~pS~v~~~-~~~~~~L~~~i~~~p~-~LG~~~ 78 (270)
|+|+|.+|+|+||+ .+++++++|...+ +++||||+|||+||++||+|.++ + .+.+|.++|+++|+ +||..+
T Consensus 5 ~~l~~~~~~y~WG~---~~~l~~l~g~~~~---~~~p~aE~W~gaHp~gpS~v~~~~G-~~~~L~~li~~~p~~~LG~~~ 77 (394)
T 2wfp_A 5 QKLINSVQNYAWGS---KTALTELYGIANP---QQQPMAELWMGAHPKSSSRITTANG-ETVSLRDAIEKNKTAMLGEAV 77 (394)
T ss_dssp EECBCEEECCTTBB---SSHHHHHHCCCCT---TCCCBCEEEESCCTTSCCEECC------EEHHHHHHHCHHHHHCHHH
T ss_pred EEcccccCCCCCCC---hhHHHHHhCCCCC---CCCCeeEEEEEecCCCceEeecCCC-CccCHHHHHHhCHHHhcCcch
Confidence 58999999999995 5679999886433 68899999999999999999863 3 46799999999998 999999
Q ss_pred HhhhcCCCcchhhcccCCCCCccccCCCHHHHHHhhccC----------CCCCCCCCCCceeEEEccCceecccCCchHH
Q psy12637 79 ISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREF----------PDIYKDENHKPELAIALSKFEALCGFKPLER 148 (270)
Q Consensus 79 ~~~fg~~lP~L~KvLs~~~~LSIQvHPd~~~A~~~~~~~----------p~~Y~D~n~KpE~~~aLt~f~~l~Gfr~~~e 148 (270)
.++||. |||||||||++++|||||||||++|+++|+++ ||||||+|||||||||||+|++|||||+.+|
T Consensus 78 ~~~fg~-lP~L~KvLda~~~LSIQvHPd~~~A~~~f~~e~~~Gi~~~~~~~~Y~D~nhKpE~~yaLt~f~al~GFr~~~e 156 (394)
T 2wfp_A 78 ANRFGE-LPFLFKVLCAAQPLSIQVHPNKRNSEIGFAKENAAGIPMDAAERNYKDPNHKPELVFALTPFLAMNAFREFSD 156 (394)
T ss_dssp HHHTSS-CCCEEEEEEESSCCCCEECCCHHHHHHHHHHHHHTTCCTTSTTCCBCCSSCCCEEEEESSCEEEEEEECCHHH
T ss_pred hhhcCC-CcEEEeeeccCCCcccccCcCHHHHHHHhhhhhcccccccccccccCCCCCCcEEEEEccchhhhcCCCCHHH
Confidence 999998 99999999999999999999999999988764 8999999999999999999999999999999
Q ss_pred HHhhhhChHHHHHHHhhhhHHHHHhcCCHHHHHHHHHHHhcCCchhHHHHHHHHHHHH--------------hc------
Q psy12637 149 IKKNIEETKELQAVIGESLVKSMVSCMNIEVFKEIFHAIMSAPQAQVEKQLCLLNETI--------------HR------ 208 (270)
Q Consensus 149 i~~~l~~~~el~~~i~~~~~~~~~~~~~~~~l~~~f~~lm~~~~~~~~~~~~~l~~rl--------------~~------ 208 (270)
|+++|+..|+++.++.. +....++++|+.+|+.+|.++..++.+.++.|.+++ .+
T Consensus 157 i~~~l~~~p~~~~l~~~-----~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~l~~~yp~D~ 231 (394)
T 2wfp_A 157 IVSLLQPVAGAHSAIAH-----FLQVPNAERLSQLFASLLNMQGEEKSRALAVLKAALNSQQGEPWQTIRVISEYYPDDS 231 (394)
T ss_dssp HHHHHGGGGGGCHHHHH-----HHHSCSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHCTTCG
T ss_pred HHHHhhcChhHHHHHHH-----hhcCccHHHHHHHHHHHHcCCcccHHHHHHHHHHHHhccccchHHHHHHHHHHCCCCc
Confidence 99999998888777654 223335789999999999999888877777664421 10
Q ss_pred ----------------------------------------------CC----cccHHHHhhhcccccCCCCcccccceec
Q psy12637 209 ----------------------------------------------TG----YSVIATLCSLLNYKFGPPEAKLLIPVIK 238 (270)
Q Consensus 209 ----------------------------------------------aG----~iDv~~L~~~l~~~~~~~~~~~~~p~~~ 238 (270)
+| |+||++|++|++|++.+++.....|..
T Consensus 232 G~~~~~lLn~v~l~pGd~~fipAG~~HAy~~G~~~Eima~SDnv~R~gltpk~~dv~~ll~vl~~~~~~~~~~~~~~~~- 310 (394)
T 2wfp_A 232 GLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAGLTPKYIDIPELVANVKFEPKPAGELLTAPVK- 310 (394)
T ss_dssp GGGHHHHEEEEEECTTCEEEECTTCCEEEEEEEEEEEECSSCBCEECSSCSSCCCHHHHHHTCCCCBCCGGGSSCCCEE-
T ss_pred hhhHHhhheEEECCCCCEEEcCCCCceEcCCCcEEEEeccCCcEEEcCCcCCccCHHHHhhhccccCCCcccccccccc-
Confidence 34 899999999999998874333334444
Q ss_pred CCCeEEecCCCCCeeEEEEEecCC
Q psy12637 239 DESCRFYLPPVADFGVAKIQVSSY 262 (270)
Q Consensus 239 ~~~~~~y~~p~~eF~l~~~~l~~g 262 (270)
++....|.+|+++|+|.++++.++
T Consensus 311 ~~~~~~~~~~~~~F~v~~~~l~~~ 334 (394)
T 2wfp_A 311 SGAELDFPIPVDDFAFSLHDLALQ 334 (394)
T ss_dssp ETTEEECCCSSSSCEEEEEECCSS
T ss_pred CCceEEEeCCCCEEEEEEEEEcCC
Confidence 236778999999999999999755
No 3
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=100.00 E-value=5.9e-49 Score=361.78 Aligned_cols=213 Identities=18% Similarity=0.246 Sum_probs=167.5
Q ss_pred CeeeccccccccCCCCCChHHHHHHHhhCCCCCCCCCceeee-eeecCCCCeEEccCCCCCccHHHHHHhCCC-cCCchh
Q psy12637 1 MELSFSIQTYEWGKIGLDSKVAQLVEAAGGTVDKDKNYAELW-LGTHPSGPSSILSQCSRSENLESWIKNNPH-CLGTDV 78 (270)
Q Consensus 1 ~~L~~~~~~y~WG~~g~~s~i~~l~~~~~~~~~~~~p~aE~W-~g~hp~~pS~v~~~~~~~~~L~~~i~~~p~-~LG~~~ 78 (270)
|+|+|.+|+|+|||+ .+++++| . +++|+||+| ||+||++||+|..++ .+.+|+++|+++|+ +||..
T Consensus 9 ~~l~p~~~~~~WGG~----~l~~~~g---~---~~~~~aE~W~~~ahp~g~S~v~~~G-~g~~L~~li~~~~~~llG~~- 76 (300)
T 1zx5_A 9 FQAQENLVERPWGGE----WIALLKG---F---RQSGIGESWEFSAHTSRPSTVLVKG-QQLSMIELFSKHRDELLGRA- 76 (300)
T ss_dssp EESSCCEEECTTCCS----HHHHHTT---S---CCSCEEEEEESCCCTTSCCEEEETT-EEEEHHHHHHHHHHHHHBTT-
T ss_pred EEeecccccCCCChH----HHHHHhC---C---CCCceeEEEEeecccCCceEEeCCC-CCCCHHHHHHhChHHHcCcc-
Confidence 579999999999964 3777776 2 678999999 799999999994333 27899999999996 99998
Q ss_pred HhhhcCCCcchhhcccCCCCCccccCCCHHHHHHhhccCCCCCCCCCCCceeEEEccCceecccCCchHHHHhhhhChHH
Q psy12637 79 ISQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDIYKDENHKPELAIALSKFEALCGFKPLERIKKNIEETKE 158 (270)
Q Consensus 79 ~~~fg~~lP~L~KvLs~~~~LSIQvHPd~~~A~~~~~~~p~~Y~D~n~KpE~~~aLt~f~~l~Gfr~~~ei~~~l~~~~e 158 (270)
.++|| +|||||||||++++|||||||||++|++++ +|+||||||||||++|+++||||+. .+.++
T Consensus 77 ~~~~~-~~P~L~KiLda~~~LSiQVHPd~~~A~~~e-------~~~~gKpE~~y~L~~~~~~~Gf~~~-------~~~~~ 141 (300)
T 1zx5_A 77 AEKFS-KFPILVRLIDAASPTQVHVHPSDKAAESLG-------EAEGGVESAWLVFNKGKAYAGFKED-------VKIEE 141 (300)
T ss_dssp TTTCS-SCCEEEEEEEECSCCCCEECCCHHHHHHTT-------CSSCCCCEEEEECSSCEEEEEESSC-------CCHHH
T ss_pred hhccC-CCCeEEEeecCCCCCCeeECcChHHHHHhc-------CCCCCCcEEEEEcccHHHhhCCCCC-------CCHHH
Confidence 78898 799999999999999999999999999977 3689999999999999999999997 57788
Q ss_pred HHHHHhhhh--HHHHHhcCC----------HHHHHHHHHHH----hcCCchhHHHHHHHHHHHHhcCCcccHHHHhhhcc
Q psy12637 159 LQAVIGESL--VKSMVSCMN----------IEVFKEIFHAI----MSAPQAQVEKQLCLLNETIHRTGYSVIATLCSLLN 222 (270)
Q Consensus 159 l~~~i~~~~--~~~~~~~~~----------~~~l~~~f~~l----m~~~~~~~~~~~~~l~~rl~~aG~iDv~~L~~~l~ 222 (270)
|++.+.++. +..+++.+. ++++|++..+. |..++.+. ..=++||+++++|++
T Consensus 142 ~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~~G~~~Eiqa~SD~t~------------~pr~l~v~~~~~vl~ 209 (300)
T 1zx5_A 142 LEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGEGLRVLEVSSNSTLAY------------FFNENDWEKVKKVLN 209 (300)
T ss_dssp HHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEESEEEEEEEESCCCCE------------ESSTTTHHHHHHHCC
T ss_pred HHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcCCCCeeeecccCCcee------------ecccCCHHHHHhhcc
Confidence 888888777 767776551 23333322222 22222111 011899999999999
Q ss_pred cccCCCCcccccceecCCCeEEecCCCCCeeEEEEEecC
Q psy12637 223 YKFGPPEAKLLIPVIKDESCRFYLPPVADFGVAKIQVSS 261 (270)
Q Consensus 223 ~~~~~~~~~~~~p~~~~~~~~~y~~p~~eF~l~~~~l~~ 261 (270)
|++.++... + ...|.+|+++|+|.++++.+
T Consensus 210 ~~~~~~~~~---~------~~~~~~~~~~F~v~~~~~~~ 239 (300)
T 1zx5_A 210 TKKVEEFEV---K------GKKGMAETENFGLEVVDVTG 239 (300)
T ss_dssp CSBCCGGGT---B------CBTTEEECSSEEEEEEEEEE
T ss_pred ccCCCcccc---c------eeEEcCCCCeEEEEEEEECC
Confidence 988765322 1 23477899999999999864
No 4
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=100.00 E-value=1.5e-46 Score=348.43 Aligned_cols=230 Identities=16% Similarity=0.201 Sum_probs=180.2
Q ss_pred CeeeccccccccCCCCCChHHHHHHHhhCCCCCCCCCceeee-eeecCCCCeEEccCCCCCccHHHHHHhCCCcCCchhH
Q psy12637 1 MELSFSIQTYEWGKIGLDSKVAQLVEAAGGTVDKDKNYAELW-LGTHPSGPSSILSQCSRSENLESWIKNNPHCLGTDVI 79 (270)
Q Consensus 1 ~~L~~~~~~y~WG~~g~~s~i~~l~~~~~~~~~~~~p~aE~W-~g~hp~~pS~v~~~~~~~~~L~~~i~~~p~~LG~~~~ 79 (270)
|+|+|.+|+|+|||. .+++++|.. + +++|+||+| ||+||++||+|.+|.+.+.+|.++|+++|++||...
T Consensus 9 ~~l~p~~~~~~WGg~----~l~~~~g~~---~-~~~~~aE~W~~~ahp~g~S~v~~g~~~g~~L~~li~~~~~llG~~~- 79 (319)
T 1qwr_A 9 IFLTPVFKEKIWGGT----ALRDRFGYS---I-PSESTGECWAISAHPKGPSTVANGPYKGKTLIELWEEHREVFGGVE- 79 (319)
T ss_dssp EEEECEEEEEEEEES----HHHHHHCCC---C-SSSSEEEEEEECCCTTSCCEECSSTTTTCBHHHHHHHCGGGGTTCC-
T ss_pred EEeccccCCCCCChH----HHHHHhCCC---C-CCCCcceEEEeecccCCCeEEeCCccCCCCHHHHHHhCHHHhCCCc-
Confidence 589999999999964 267777743 2 478999999 799999999999877678999999999999999875
Q ss_pred hhhcCCCcchhhcccCCCCCccccCCCHHHHHHhhccCCCCCCCCCCCceeEEEccCc---eecccCCchHHHHhhhhCh
Q psy12637 80 SQFGEKLPFLLKVLSVDKALSIQMHPSKEQAVKLHREFPDIYKDENHKPELAIALSKF---EALCGFKPLERIKKNIEET 156 (270)
Q Consensus 80 ~~fg~~lP~L~KvLs~~~~LSIQvHPd~~~A~~~~~~~p~~Y~D~n~KpE~~~aLt~f---~~l~Gfr~~~ei~~~l~~~ 156 (270)
+.+|||||||||++++|||||||||++|+++++ |+||||||||||++| ++++|... .+.
T Consensus 80 ---~~~~P~L~KiLda~~~LSiQvHPd~~~A~~~e~-------~~~gKpE~~y~L~~~~~~~~~~G~~~--------~~~ 141 (319)
T 1qwr_A 80 ---GDRFPLLTKLLDVKEDTSIKVHPDDYYAGENEE-------GELGKTECWYIIDCKENAEIIYGHTA--------RSK 141 (319)
T ss_dssp ---CSSCCEEEEEEEESSCCCEEECCCHHHHHHHTT-------TCCCCCEEEEEEEECTTCEEEEEECC--------SSH
T ss_pred ---cCcCceEEeeeccCCCcCcccCcCHHHHHHhcC-------CCCCCCEEEEEccCCCchhheeCCCC--------CCH
Confidence 568999999999999999999999999999873 579999999999964 68999665 478
Q ss_pred HHHHHHHhhhhHHHHHhcC----------CHHHHHHHHHHHhcCCchhHHHHHHHHHHHHhc------CC---cccHHHH
Q psy12637 157 KELQAVIGESLVKSMVSCM----------NIEVFKEIFHAIMSAPQAQVEKQLCLLNETIHR------TG---YSVIATL 217 (270)
Q Consensus 157 ~el~~~i~~~~~~~~~~~~----------~~~~l~~~f~~lm~~~~~~~~~~~~~l~~rl~~------aG---~iDv~~L 217 (270)
+++++++.++.+..+++.+ +++++|++....+..+-.+.++. +-|+.+ .| ++|++++
T Consensus 142 e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~~G~~~~Eiq~~SD~----t~R~yDy~R~g~~g~pr~lhv~~~ 217 (319)
T 1qwr_A 142 TELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHALCKGALVLETQQNSDA----TYRVYDYDRLDSNGSPRELHFAKA 217 (319)
T ss_dssp HHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEECSSEEEEEEEESCCC----CEEEECTTCBCTTSCBCCCCHHHH
T ss_pred HHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEecCCCeEEEEEeCCcc----EEEcccccccCCCCCcccCCHHHH
Confidence 9999999999998888876 24666666555543332221111 224433 34 8999999
Q ss_pred hhhcccccCCCCcccccceecCCCeEEecCCCCCeeEEEEEecCC
Q psy12637 218 CSLLNYKFGPPEAKLLIPVIKDESCRFYLPPVADFGVAKIQVSSY 262 (270)
Q Consensus 218 ~~~l~~~~~~~~~~~~~p~~~~~~~~~y~~p~~eF~l~~~~l~~g 262 (270)
++|++|++.++....... ...+....|.+|+++|+|.++++.++
T Consensus 218 ~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~F~~~~~~~~~~ 261 (319)
T 1qwr_A 218 VNAATVPHVDGYIDESTE-SRKGITIKTFVQGEYFSVYKWDINGE 261 (319)
T ss_dssp HHHSCSSCCCCCCCCEEE-EETTEEEEEEEECSSCEEEEEEEEEE
T ss_pred HhhccccCCCccccccee-ecCCceEEEeCCCCEEEEEEEEECCc
Confidence 999999988765432211 21324677889999999999998654
No 5
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=21.66 E-value=2.7e+02 Score=22.40 Aligned_cols=49 Identities=16% Similarity=0.083 Sum_probs=34.4
Q ss_pred HHHHHHHHHHh-----cCCchhHHHHHHHHHHHHhc--CCcccHHHHhhhcccccC
Q psy12637 178 EVFKEIFHAIM-----SAPQAQVEKQLCLLNETIHR--TGYSVIATLCSLLNYKFG 226 (270)
Q Consensus 178 ~~l~~~f~~lm-----~~~~~~~~~~~~~l~~rl~~--aG~iDv~~L~~~l~~~~~ 226 (270)
+.++.++..+. ..+.+.+...+..++..+.. .|.|+.+++++++...|.
T Consensus 216 ~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF~~~~~~~p~ 271 (272)
T 2be4_A 216 PEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCLGLKHK 271 (272)
T ss_dssp HHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHccCCC
Confidence 55666665554 35566666666667777764 349999999999987654
No 6
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=21.62 E-value=47 Score=24.02 Aligned_cols=22 Identities=9% Similarity=0.077 Sum_probs=18.1
Q ss_pred CCCCCeeEEEEEecCCCCCCcc
Q psy12637 247 PPVADFGVAKIQVSSYHSPHSH 268 (270)
Q Consensus 247 ~p~~eF~l~~~~l~~g~~~~~~ 268 (270)
...+.|.|.++++++|++...|
T Consensus 12 ien~~~rV~r~~i~PG~~~~~H 33 (98)
T 3lag_A 12 IDNDEVRVTEWRLPPGSATGHH 33 (98)
T ss_dssp EESSSEEEEEEEECTTEECCSE
T ss_pred EcCCeEEEEEEEECCCCccCcE
Confidence 3567899999999999877665
No 7
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=19.59 E-value=41 Score=24.01 Aligned_cols=11 Identities=36% Similarity=0.655 Sum_probs=9.1
Q ss_pred CCCccccCCCH
Q psy12637 97 KALSIQMHPSK 107 (270)
Q Consensus 97 ~~LSIQvHPd~ 107 (270)
..|+.+.|||+
T Consensus 38 r~l~~~~HPDk 48 (94)
T 1wjz_A 38 QKLILLYHPDK 48 (94)
T ss_dssp HHTTSSSCSTT
T ss_pred HHHHHHHCcCC
Confidence 34889999998
No 8
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=16.12 E-value=2.4e+02 Score=20.13 Aligned_cols=48 Identities=13% Similarity=0.174 Sum_probs=32.1
Q ss_pred CHHHHHHHHHHHhc--CCchhHHHHHHHHHHHHhcC--CcccHHHHhhhccc
Q psy12637 176 NIEVFKEIFHAIMS--APQAQVEKQLCLLNETIHRT--GYSVIATLCSLLNY 223 (270)
Q Consensus 176 ~~~~l~~~f~~lm~--~~~~~~~~~~~~l~~rl~~a--G~iDv~~L~~~l~~ 223 (270)
+.+.|+.++..++. .......+.+..+++.+... |.||.+|++.++.-
T Consensus 32 s~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~ 83 (100)
T 3nxa_A 32 SKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGG 83 (100)
T ss_dssp CHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 45778888877543 22223345677777776654 49999999998763
No 9
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=12.95 E-value=5.8e+02 Score=21.16 Aligned_cols=27 Identities=11% Similarity=0.071 Sum_probs=23.9
Q ss_pred EEecCCCCCeeEEEEEecCCCCCCccC
Q psy12637 243 RFYLPPVADFGVAKIQVSSYHSPHSHQ 269 (270)
Q Consensus 243 ~~y~~p~~eF~l~~~~l~~g~~~~~~~ 269 (270)
.+|.-|...|+|..+.-.+|+..-+|.
T Consensus 64 lL~~dp~~~f~v~~l~W~PGq~spiHD 90 (211)
T 3uss_A 64 LLHVDSRQRFSVVSFVWGPGQITPVHD 90 (211)
T ss_dssp EEEECTTSSCEEEEEEECTTCBCCSBC
T ss_pred EEecCCCCCEEEEEEEECCCCcCCCCC
Confidence 478778889999999999999998884
No 10
>3kj0_B BCL-2-like protein 11; BH3, apoptosis, protein-peptide complex, alternative splicing, cytoplasm, developmental protein, differentiation; 1.70A {Homo sapiens} PDB: 2pqk_B
Probab=12.49 E-value=9.5 Score=21.61 Aligned_cols=8 Identities=38% Similarity=0.559 Sum_probs=5.2
Q ss_pred CCceeEEE
Q psy12637 126 HKPELAIA 133 (270)
Q Consensus 126 ~KpE~~~a 133 (270)
..||||||
T Consensus 4 ~~PE~wiA 11 (27)
T 3kj0_B 4 GRPEIWYA 11 (27)
T ss_dssp CCHHHHHH
T ss_pred CCchhHHH
Confidence 45777765
Done!