RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1264
(209 letters)
>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR
{Human (Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 89.1 bits (220), Expect = 5e-23
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 20/152 (13%)
Query: 19 VLPGLYVGNYRDSKDAVQLDRFNITHIVAIHDSARKIHPVSKTKASQPAN--HYQVDPRG 76
V P +YVGN ++D +L + ITH++ + +H + + + + +
Sbjct: 26 VTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKAND 85
Query: 77 GPDQVYLSEQNISH----------------FSLAGMSRSVTVTIAYIMSVTSLNWKEALK 120
+ + + G SRS T+ IAY+M ++ K AL
Sbjct: 86 TQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALS 145
Query: 121 VVRVGRAIANPNNGFQKQLQDFECFRLADERR 152
+VR R I PN+GF QL RLA E +
Sbjct: 146 IVRQNREIG-PNDGFLAQLCQLND-RLAKEGK 175
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1
[TaxId: 9606]}
Length = 145
Score = 86.3 bits (213), Expect = 2e-22
Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Query: 19 VLPGLYVGNYRDSKDAVQLDRFNITHIVAIHDSARKIHPVSKTKASQPANHYQVDPRGG- 77
+LP L++G+ S D L IT ++ + S S P Q+
Sbjct: 7 ILPYLFLGSCSHSSDLQGLQACGITAVLNVSASCPNHFEGLFRYKSIPVEDNQMVEISAW 66
Query: 78 -------PDQVYLSEQNISHFSLAGMSRSVTVTIAYIMSVTSLNWKEALKVVRVGRAIAN 130
D V S + S AG+SRS T+ +AY+M + EA V+ R + +
Sbjct: 67 FQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVIS 126
Query: 131 PNNGFQKQLQDFE 143
PN F QL FE
Sbjct: 127 PNFSFMGQLLQFE 139
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1
(mkp3) [TaxId: 9606]}
Length = 144
Score = 81.4 bits (200), Expect = 2e-20
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Query: 19 VLPGLYVGNYRDSKDAVQLDRFNITHIVAIHDSARKIHPVSKT----------KASQPAN 68
+LP LY+G +DS + L+ F I +I+ + + + + SQ +
Sbjct: 7 ILPFLYLGCAKDSTNLDVLEEFGIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQNLS 66
Query: 69 HYQVDPRGGPDQVYLSEQNISHFSLAGMSRSVTVTIAYIMSVTSLNWKEALKVVRVGRAI 128
+ + D+ + SLAG+SRSVTVT+AY+M +L+ +A +V++ ++
Sbjct: 67 QFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSN 126
Query: 129 ANPNNGFQKQLQDFE 143
+PN F QL DFE
Sbjct: 127 ISPNFNFMGQLLDFE 141
>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 194
Score = 47.8 bits (113), Expect = 1e-07
Identities = 7/50 (14%), Positives = 18/50 (36%)
Query: 94 AGMSRSVTVTIAYIMSVTSLNWKEALKVVRVGRAIANPNNGFQKQLQDFE 143
G +R+ + A+++ + + A+ R + K+L
Sbjct: 124 HGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELFRRY 173
>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 182
Score = 42.3 bits (99), Expect = 9e-06
Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 13/142 (9%)
Query: 26 GNYRDSKDAVQLDRFNITHIVAIHDSARKIHPVSKTKASQPANHYQVDPRGGP------- 78
G ++ S + + F ++ I ++++ + + +H G
Sbjct: 41 GYHQHSPETY-IQYFKNHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGSTPTDAIVK 99
Query: 79 ---DQVYLSEQNISHFSLAGMSRSVTVTIAYIMSVTSLNWKEALKVVRVGR--AIANPNN 133
D +E I+ S AG+ R+ T+ YIM + E + VR+ R ++ P
Sbjct: 100 EFLDICENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQ 159
Query: 134 GFQKQLQDFECFRLADERRRLR 155
F Q R++L+
Sbjct: 160 QFLVMKQTNLWLEGDYFRQKLK 181
>d1b4ra_ b.1.3.1 (A:) Polycystein-1, PKD-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 80
Score = 28.0 bits (62), Expect = 0.25
Identities = 9/42 (21%), Positives = 14/42 (33%)
Query: 63 ASQPANHYQVDPRGGPDQVYLSEQNISHFSLAGMSRSVTVTI 104
A P + D G +V + SH + VT +
Sbjct: 22 APLPVTATRWDFGDGSAEVDAAGPAASHRYVLPGRYHVTAVL 63
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human
(Homo sapiens), pr-1 [TaxId: 9606]}
Length = 152
Score = 28.1 bits (62), Expect = 0.46
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
Query: 88 ISHFSLAGMSRSVTVTIAYIMSVTSLNWKEALKVVRVGRAIANPNNGFQKQLQDFECFRL 147
H AG+ R+ + ++ + +++A++ +R R A KQL E +
Sbjct: 93 AVHCV-AGLGRAPVLVALALIE-GGMKYEDAVQFIRQKRRGAFN----SKQLLYLEKY-- 144
Query: 148 ADERRRLRERF 158
R ++R RF
Sbjct: 145 ---RPKMRLRF 152
>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten
(Pten tumor suppressor), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 174
Score = 28.0 bits (62), Expect = 0.63
Identities = 11/48 (22%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 94 AGMSRSVTVTIAYIM-SVTSLNWKEALKVVRVGRAIANPNNGFQKQLQ 140
AG R+ + AY++ L +EAL R Q +
Sbjct: 113 AGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQRR 160
>d1pzsa_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 171
Score = 26.2 bits (57), Expect = 2.5
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 20 LPGLYVGNYRDSKDAVQLDRFNITHIVAIHDSARKIHPVSKTKASQPANHY-QVDPRGGP 78
L L V + D F + +++ +A IH + A+ P Y QV+ GP
Sbjct: 90 LASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGP 149
Query: 79 DQVYLSEQN 87
D+ L+ +
Sbjct: 150 DETTLTTGD 158
>d2iwgb1 b.29.1.22 (B:4-182) 52 kDa Ro protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 179
Score = 25.4 bits (55), Expect = 4.2
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 144 CFRLADERRRLR-ERFPSRALASMDEEQCQLLLIAYQGLLSGKHICEGNCAMGEICPTGM 202
L+++RR++R + + +++ Q SGKH E + E G+
Sbjct: 13 WLILSEDRRQVRLGDTQQSIPGNEERFDSYPMVLGAQHFHSGKHYWEVDVTGKEAWDLGV 72
Query: 203 CRASRSR 209
CR S R
Sbjct: 73 CRDSVRR 79
>d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 454
Score = 25.6 bits (56), Expect = 5.3
Identities = 8/61 (13%), Positives = 20/61 (32%)
Query: 69 HYQVDPRGGPDQVYLSEQNISHFSLAGMSRSVTVTIAYIMSVTSLNWKEALKVVRVGRAI 128
++ D + ++E + G+ R T Y +++T + +
Sbjct: 308 AKELLAHDPVDPIAVTEAMLKLAKKTGVKRIHFHTYGYYLALTEYKGEHVRDALLFAALA 367
Query: 129 A 129
A
Sbjct: 368 A 368
>d2fbea1 b.29.1.22 (A:1-188) Similar to Ret finger protein-like 1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 188
Score = 25.0 bits (54), Expect = 6.0
Identities = 11/67 (16%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Query: 144 CFRLADERRRLR-ERFPSRALASMDEEQCQLLLIAYQGLLSGKHICEGNCAMGEICPTGM 202
++++ R R + L ++ SG+H E + ++ G+
Sbjct: 22 YLIISEDLRSFRSGDLSQNRKEQAERFDTALCVLGTPRFTSGRHYWEVDVGTSQVWDVGV 81
Query: 203 CRASRSR 209
C+ S +R
Sbjct: 82 CKESVNR 88
>d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
{Dog (Canis familiaris) [TaxId: 9615]}
Length = 337
Score = 25.1 bits (54), Expect = 6.4
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 28 YRDSKDAVQLDRFNITHIVAIHDSARKIHPVSKTKASQPANHYQVDPRGGPDQ 80
++ + + V+LD + + IH A + P SQ H P GG +
Sbjct: 183 FQGTPEEVRLDPTDADFVDVIHTDAAPLIPFLGFGTSQQMGHLDFFPNGGEEM 235
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.135 0.406
Gapped
Lambda K H
0.267 0.0547 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 785,049
Number of extensions: 34998
Number of successful extensions: 95
Number of sequences better than 10.0: 1
Number of HSP's gapped: 91
Number of HSP's successfully gapped: 15
Length of query: 209
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 128
Effective length of database: 1,295,466
Effective search space: 165819648
Effective search space used: 165819648
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (23.8 bits)