BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12642
(201 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6TGY8|EMC2_DANRE ER membrane protein complex subunit 2 OS=Danio rerio GN=emc2 PE=2
SV=1
Length = 297
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 136/194 (70%), Gaps = 7/194 (3%)
Query: 15 RYEEALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQEL 74
RY++A + ++I++ D TNTAARKRKICIL+A+ K EAI+EL EYL++F+ DQE W EL
Sbjct: 102 RYDDANKLYDSILQDDPTNTAARKRKICILRAQGKSSEAIRELNEYLEQFVGDQEAWHEL 161
Query: 75 CDLYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINL 134
+LY++E DYAKA FC+EEL + +PHNHL ++YA++ YTQGGLEN+ELA ++ A+ L
Sbjct: 162 SELYINEHDYAKAAFCLEELMMTNPHNHLYCEQYAEVKYTQGGLENLELARKYFAQALKL 221
Query: 135 NEKNIRALYGLALSCHQVLTSAKCSAAKKKEISKQMMWVSKHLARQYE-------EQQGN 187
N +N+RAL+GL +S + S K SA KK+ K W + ++R Y+ E + +
Sbjct: 222 NNRNMRALFGLYMSASHIAASPKVSAKVKKDNVKYAAWAAAQISRAYQMAGRGKKENKCS 281
Query: 188 TETLTELMSALQVS 201
+ + E++ +LQ++
Sbjct: 282 VKAVEEMLESLQIT 295
>sp|Q9CRD2|EMC2_MOUSE ER membrane protein complex subunit 2 OS=Mus musculus GN=Emc2 PE=2
SV=1
Length = 297
Score = 181 bits (458), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 121/168 (72%)
Query: 15 RYEEALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQEL 74
RY++A++ + I++ D TNTAARKRKI I KA+ K EAI+EL EYL++F+ DQE W EL
Sbjct: 102 RYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKTVEAIRELNEYLEQFVGDQEAWHEL 161
Query: 75 CDLYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINL 134
+LY++E DYAKA FC+EEL + +PHNHL Q+YA++ YTQGGLEN+EL+ ++ A+ L
Sbjct: 162 AELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYFAQALKL 221
Query: 135 NEKNIRALYGLALSCHQVLTSAKCSAAKKKEISKQMMWVSKHLARQYE 182
N +N+RAL+GL +S + ++ K SA KK+ K W + + R Y+
Sbjct: 222 NNRNMRALFGLYMSASHIASNPKASAKMKKDNIKYASWAANQINRAYQ 269
>sp|Q5R882|EMC2_PONAB ER membrane protein complex subunit 2 OS=Pongo abelii GN=EMC2 PE=2
SV=1
Length = 297
Score = 181 bits (458), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 121/168 (72%)
Query: 15 RYEEALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQEL 74
RY++A++ + I++ D TNTAARKRKI I KA+ K EAI+EL EYL++F+ DQE W EL
Sbjct: 102 RYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHEL 161
Query: 75 CDLYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINL 134
+LY++E DYAKA FC+EEL + +PHNHL Q+YA++ YTQGGLEN+EL+ ++ A+ L
Sbjct: 162 AELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYFAQALKL 221
Query: 135 NEKNIRALYGLALSCHQVLTSAKCSAAKKKEISKQMMWVSKHLARQYE 182
N +N+RAL+GL +S + ++ K SA KK+ K W + + R Y+
Sbjct: 222 NNRNMRALFGLYMSASHIASNPKASAKTKKDNMKYASWAASQINRAYQ 269
>sp|Q15006|EMC2_HUMAN ER membrane protein complex subunit 2 OS=Homo sapiens GN=EMC2 PE=1
SV=1
Length = 297
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 121/168 (72%)
Query: 15 RYEEALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQEL 74
RY++A++ + I++ D TNTAARKRKI I KA+ K EAI+EL EYL++F+ DQE W EL
Sbjct: 102 RYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHEL 161
Query: 75 CDLYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINL 134
+LY++E DYAKA FC+EEL + +PHNHL Q+YA++ YTQGGLEN+EL+ ++ A+ L
Sbjct: 162 AELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYFAQALKL 221
Query: 135 NEKNIRALYGLALSCHQVLTSAKCSAAKKKEISKQMMWVSKHLARQYE 182
N +N+RAL+GL +S + ++ K SA KK+ K W + + R Y+
Sbjct: 222 NNRNMRALFGLYMSASHIASNPKASAKTKKDNMKYASWAASQINRAYQ 269
>sp|B0BNG0|EMC2_RAT ER membrane protein complex subunit 2 OS=Rattus norvegicus GN=Emc2
PE=2 SV=1
Length = 297
Score = 180 bits (456), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 133/194 (68%), Gaps = 7/194 (3%)
Query: 15 RYEEALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQEL 74
RY++A++ + I++ D TNTAARKRKI I KA+ K EAI+EL EYL++F+ DQE W EL
Sbjct: 102 RYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHEL 161
Query: 75 CDLYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINL 134
+LY++E DYAKA FC+EEL + +PHNHL Q+YA++ YTQGGLEN+EL+ ++ A+ L
Sbjct: 162 AELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYFAQALKL 221
Query: 135 NEKNIRALYGLALSCHQVLTSAKCSAAKKKEISKQMMWVSKHLARQYE-------EQQGN 187
N +N+RAL+GL +S + ++ K SA KK+ + W + + R Y+ E + +
Sbjct: 222 NNRNMRALFGLYMSASHIASNPKASAKMKKDNIRYAGWAANQINRAYQFAGRSKKETKSS 281
Query: 188 TETLTELMSALQVS 201
+ + +++ LQ++
Sbjct: 282 LKAVEDMLETLQIT 295
>sp|Q6INS3|EMC2A_XENLA ER membrane protein complex subunit 2-A OS=Xenopus laevis GN=emc2-a
PE=2 SV=1
Length = 297
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 132/194 (68%), Gaps = 7/194 (3%)
Query: 15 RYEEALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQEL 74
RY++AL+ + I++ D TNTAARKRKI I KA+ + EAI+EL EYL++F+ DQE W EL
Sbjct: 102 RYDDALQIYDRILQDDPTNTAARKRKIAIRKAQGRNSEAIRELNEYLEQFVGDQEAWHEL 161
Query: 75 CDLYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINL 134
+LY++E DYAKA FC+EEL L +PHNH +Q++A++ YTQGGLEN+EL+ ++ A+ L
Sbjct: 162 AELYINELDYAKAAFCLEELILTNPHNHFYYQQFAEVKYTQGGLENLELSRKYFSQALKL 221
Query: 135 NEKNIRALYGLALSCHQVLTSAKCSAAKKKEISKQMMWVSKHLARQYE-------EQQGN 187
N N+RAL+GL +S + ++ K SA KK+ K W + + + Y+ + Q +
Sbjct: 222 NNHNMRALFGLYISSVHIASNPKASAKMKKDNVKYATWAASQIKKAYQLAGRTMTDTQTS 281
Query: 188 TETLTELMSALQVS 201
+ + +++ LQ++
Sbjct: 282 LKAVEDMLETLQIT 295
>sp|Q5M7J9|EMC2_XENTR ER membrane protein complex subunit 2 OS=Xenopus tropicalis GN=emc2
PE=2 SV=1
Length = 297
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 132/194 (68%), Gaps = 7/194 (3%)
Query: 15 RYEEALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQEL 74
RY++AL+ + I++ D TNTAARKRKI I KA+ + EAI+EL EYL++F+ DQE W EL
Sbjct: 102 RYDDALQIYDRILQDDPTNTAARKRKIAIRKAQGRNAEAIRELNEYLEQFVGDQEAWHEL 161
Query: 75 CDLYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINL 134
+LY++E DYAKA FC+EEL L +PHNH +Q++A++ YTQGGLEN+EL+ ++ A+ L
Sbjct: 162 AELYINELDYAKAAFCLEELILTNPHNHFYYQQFAEVKYTQGGLENLELSRKYFSQALKL 221
Query: 135 NEKNIRALYGLALSCHQVLTSAKCSAAKKKEISKQMMWVSKHLARQYE-------EQQGN 187
N N+RAL+GL +S + ++ K SA KK+ K W + + + Y+ + Q +
Sbjct: 222 NNHNMRALFGLYISSVHIASNPKASAKMKKDNVKYATWATSQIKKAYQLAGRTMTDTQTS 281
Query: 188 TETLTELMSALQVS 201
+ + +++ LQ++
Sbjct: 282 LKAVEDMLETLQIT 295
>sp|Q5E993|EMC2_BOVIN ER membrane protein complex subunit 2 OS=Bos taurus GN=EMC2 PE=2
SV=1
Length = 297
Score = 177 bits (448), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 121/168 (72%)
Query: 15 RYEEALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQEL 74
RY++A++ + I++ D TNTAARKRKI I KA+ K EAI+EL EYL++F+ DQE W EL
Sbjct: 102 RYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHEL 161
Query: 75 CDLYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINL 134
+LY++E DYAKA FC+EEL + +P+NHL Q+YA++ YTQGGLEN+EL+ ++ A+ L
Sbjct: 162 AELYINEHDYAKAAFCLEELMMTNPYNHLYCQQYAEVKYTQGGLENLELSRKYFAQALKL 221
Query: 135 NEKNIRALYGLALSCHQVLTSAKCSAAKKKEISKQMMWVSKHLARQYE 182
N +N+RAL+GL +S + ++ K SA KK+ K W + + + Y+
Sbjct: 222 NNRNMRALFGLYMSASHIASNPKASAKTKKDNMKYASWAASQINKAYQ 269
>sp|Q8AVU9|EMC2B_XENLA ER membrane protein complex subunit 2-B OS=Xenopus laevis GN=emc2-b
PE=2 SV=1
Length = 297
Score = 174 bits (441), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 131/194 (67%), Gaps = 7/194 (3%)
Query: 15 RYEEALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQEL 74
RY++AL+ + I++ D TNTA RKRKI I KA+ + EAI+EL EYL++F+ DQE W EL
Sbjct: 102 RYDDALQIYDRILQDDPTNTATRKRKIAIRKAQGRNAEAIRELNEYLEQFVGDQEAWHEL 161
Query: 75 CDLYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINL 134
+LY++E DYAKA FC+EEL L +PHNH +Q++A++ YTQGGLEN+EL+ ++ A+ L
Sbjct: 162 AELYINELDYAKAAFCLEELILTNPHNHFYYQQFAEVKYTQGGLENLELSRKYFSQALKL 221
Query: 135 NEKNIRALYGLALSCHQVLTSAKCSAAKKKEISKQMMWVSKHLARQYE-------EQQGN 187
N ++RAL+GL +S + ++ K SA KK+ K W + + + Y+ + Q +
Sbjct: 222 NNHSMRALFGLYMSSVHIASNPKASAKMKKDNVKYATWATSQIKKAYQLAGRTMTDTQTS 281
Query: 188 TETLTELMSALQVS 201
+ + +++ LQ++
Sbjct: 282 LKAVEDMLETLQIT 295
>sp|Q86K48|EMC2_DICDI ER membrane protein complex subunit 2 OS=Dictyostelium discoideum
GN=emc2 PE=3 SV=1
Length = 322
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 18 EALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQELCDL 77
EAL+ E+I+K ++ + KR++ I K + + +AI+ L YL+ +M D E W EL
Sbjct: 126 EALQIFESILKKYPSDALSMKRQVAIFKGQGNLSKAIQVLNAYLQIYMCDLEAWLELSSF 185
Query: 78 YLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEK 137
++S Y+ A++C+EE+ L+ P N + + +YA+ LY GG EN A+ +Y A+ LN
Sbjct: 186 HISYLSYSTALYCLEEVLLNAPINFVFYIKYAEPLYCLGGNENYNSAVQYYTHALELNSP 245
Query: 138 N-----------IRALYGLALSCHQV 152
+ A+YG+ +S + +
Sbjct: 246 TEMDKLDHPPTFLPAIYGIIMSIYSL 271
>sp|O60110|OCA3_SCHPO TPR repeat protein oca3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=oca3 PE=4 SV=3
Length = 282
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 17 EEALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQELCD 76
++A+ + + + D T+T KRK+ +L++ + E I+ L YL F D E W EL D
Sbjct: 88 KDAMSYYNSKLSEDPTHTVIYKRKLALLRSMGQTKECIQGLINYLDTFYNDLEAWAELAD 147
Query: 77 LYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYT--QGGLENIELAISHYLMAINL 134
+Y+S + A+FC EE+ L P L R D+ + Q N ++ HY ++ +
Sbjct: 148 IYVSVEAFESAIFCYEEMVLLQPFEPRLFARLGDLYFVLAQSNATNYWFSLKHYCRSVEI 207
Query: 135 NEKNIRALYGLALSCHQVL 153
E+ +G++ C Q+L
Sbjct: 208 CEEYFHGWFGISKCCQQLL 226
>sp|P47133|EMC2_YEAST ER membrane protein complex subunit 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=EMC2 PE=1 SV=1
Length = 292
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 19 ALEHLETIIKID---ETN----TAARKRKICI-LKAKNKIPEAI-KELTEYLKKFMTDQE 69
A+E+LE ++ D ET+ + K+ I I +KN E++ KE+ KF D E
Sbjct: 105 AIEYLENLLNDDLEYETDFVTYVSIAKKLIAIKTTSKNLSQESVLKEVVALTDKFPLDAE 164
Query: 70 TWQELCDLYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILY-------TQGGLENIE 122
W ++Y G + KA +C+E++ P N+ R ++ LY Q E +E
Sbjct: 165 LWWYASEIYFEMGQFEKACYCLEQVLCITPFNYACFGRLSETLYYEALRSKKQTKTELLE 224
Query: 123 LAISHYLMAINLNEKNIRA-----LYGLALSCHQVLTSAKCSAAKKKEIS 167
A+ + L ++ L+E ++ + L ++ K SA+K KEIS
Sbjct: 225 KALKNALRSVELSELYLKGWALVNIISRELGRNKQNDLIKLSASKLKEIS 274
>sp|Q9ULT0|TTC7A_HUMAN Tetratricopeptide repeat protein 7A OS=Homo sapiens GN=TTC7A PE=1
SV=3
Length = 858
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 19/114 (16%)
Query: 46 AKNKIPEAIKELT---EYLKK-----FMTDQETWQELCDLYLSEGDYAKAVFCMEELFLH 97
A +++ EA+ ELT LK+ + T ++ W + +L++ + +A FC++E
Sbjct: 681 AASRLEEAMSELTMPSSVLKQGPMQLWTTLEQIWLQAAELFMEQQHLKEAGFCIQEAAGL 740
Query: 98 HPHNHLLHQRYADILYTQGGLE----NIELAISHYLMAINLNEKNIRALYGLAL 147
P +H +LY +G L N+E A Y A+ +N +R ++ L L
Sbjct: 741 FPTSH-------SVLYMRGRLAEVKGNLEEAKQLYKEALTVNPDGVRIMHSLGL 787
>sp|Q7Z4L5|TT21B_HUMAN Tetratricopeptide repeat protein 21B OS=Homo sapiens GN=TTC21B PE=1
SV=2
Length = 1316
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 16 YEEALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQELC 75
Y EAL H ET KI AR + A++ +++ L+ ++ +
Sbjct: 907 YREALVHCETDNKI--MLELAR-----LYLAQDDPDSCLRQCALLLQSDQDNEAATMMMA 959
Query: 76 DLYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENI 121
DL + DY +AVF +++L P N++ R D+L G LE++
Sbjct: 960 DLMFRKQDYEQAVFHLQQLLERKPDNYMTLSRLIDLLRRCGKLEDV 1005
>sp|Q8BGB2|TTC7A_MOUSE Tetratricopeptide repeat protein 7A OS=Mus musculus GN=Ttc7a PE=1
SV=1
Length = 858
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 19/119 (15%)
Query: 46 AKNKIPEAIKELT---EYLKK-----FMTDQETWQELCDLYLSEGDYAKAVFCMEELFLH 97
A +++ EA+ ELT LK+ + T ++ W + +L++ + +A FC++E
Sbjct: 681 AASRLEEAMSELTLTTSVLKQGPMQLWTTLEQIWLQAAELFMEQRQLKEAGFCIQEAAGL 740
Query: 98 HPHNHLLHQRYADILYTQGGLENI----ELAISHYLMAINLNEKNIRALYGLALSCHQV 152
P +H +LY +G L + E A Y A+ +N +R ++ L L Q+
Sbjct: 741 FPTSH-------SVLYMRGRLAEVKGSFEEAKQLYKEALTVNPDGVRIMHSLGLMLSQL 792
>sp|Q5ZMQ9|PEX5_CHICK Peroxisomal targeting signal 1 receptor OS=Gallus gallus GN=PEX5
PE=2 SV=1
Length = 645
Score = 35.4 bits (80), Expect = 0.23, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 77 LYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE 136
L+ G+Y KAV C P++HLL + L E A++ Y A+ L
Sbjct: 503 LFNLSGEYEKAVDCFSAALSVRPNDHLLWNKLGATLANGNRSEE---AVAAYRRALELQP 559
Query: 137 KNIRALYGLALSC 149
IR+ Y L +SC
Sbjct: 560 GYIRSRYNLGISC 572
>sp|Q84JR9|TTL4_ARATH TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana
GN=TTL4 PE=2 SV=1
Length = 682
Score = 35.0 bits (79), Expect = 0.35, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 32/72 (44%)
Query: 16 YEEALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQELC 75
Y EAL + I + N A R + L A ++ EA+KE E ++ + Q L
Sbjct: 227 YAEALALYDRAISLSPENPAYRSNRAAALAASGRLEEAVKECLEAVRCDPSYARAHQRLA 286
Query: 76 DLYLSEGDYAKA 87
LYL G+ A
Sbjct: 287 SLYLRLGEAENA 298
>sp|Q6PGP7|TTC37_HUMAN Tetratricopeptide repeat protein 37 OS=Homo sapiens GN=TTC37 PE=1
SV=1
Length = 1564
Score = 35.0 bits (79), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 8/143 (5%)
Query: 17 EEALEHLETIIKIDETNTAAR---KRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQE 73
E AL L T+ + TA +R + LKA + +A+ +L L+ D W+
Sbjct: 545 EMALAILTTVTQKASAGTAKWAWLRRGLYYLKA-GQHSQAVADLQAALRADPKDFNCWES 603
Query: 74 LCDLYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAIN 133
L + YLS G Y A+ + +P + + A I Q L + A++ Y M I
Sbjct: 604 LGEAYLSRGGYTTALKSFTKASELNPESIYSVFKVAAI---QQILGKYKEAVAQYQMIIK 660
Query: 134 LNEKNIRALYGLALSCHQVLTSA 156
E + AL GL CH ++ A
Sbjct: 661 KKEDYVPALKGLG-ECHLMMAKA 682
>sp|Q01495|PEX5_PICAN Peroxisomal targeting signal receptor OS=Pichia angusta GN=PEX5
PE=3 SV=1
Length = 569
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 67 DQETWQELCDLYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAIS 126
D E L L+ S +Y+K + C + H+P++ L R L E AI
Sbjct: 415 DSEVQTGLGVLFYSMEEYSKTLDCFQAAIEHNPNDALAWNRLGASLANSN---KPEQAIE 471
Query: 127 HYLMAINLNEKNIRALYGLALS 148
Y + LN +RA Y L +S
Sbjct: 472 AYSRTLQLNPNFVRARYNLGVS 493
>sp|Q99144|PEX5_YARLI Peroxisomal targeting signal receptor OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=PAY32 PE=3 SV=1
Length = 598
Score = 33.9 bits (76), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 77 LYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE 136
L+ +Y KA+ C P + LL R L E AI Y A+ L
Sbjct: 457 LFYGNEEYDKAIDCFNAAIAVRPDDALLWNRLGATLANS---HRSEEAIDAYYKALELRP 513
Query: 137 KNIRALYGLALSC 149
+RA Y L +SC
Sbjct: 514 SFVRARYNLGVSC 526
>sp|Q9SIN1|TTL3_ARATH Inactive TPR repeat-containing thioredoxin TTL3 OS=Arabidopsis
thaliana GN=TTL3 PE=1 SV=2
Length = 691
Score = 33.5 bits (75), Expect = 0.92, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 32/72 (44%)
Query: 16 YEEALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQELC 75
+ EAL + I I N A R + L A ++ EA+KE E ++ + Q L
Sbjct: 236 FSEALSLYDRAILISPGNAAYRSNRAAALTALRRLGEAVKECLEAVRIDPSYSRAHQRLA 295
Query: 76 DLYLSEGDYAKA 87
LYL G+ A
Sbjct: 296 SLYLRLGEAENA 307
>sp|Q920N5|PEX5_CRIGR Peroxisomal targeting signal 1 receptor OS=Cricetulus griseus
GN=PEX5 PE=1 SV=1
Length = 640
Score = 33.5 bits (75), Expect = 1.1, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 77 LYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE 136
L+ G+Y KAV C P+++LL + L E A++ Y A+ L
Sbjct: 498 LFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEE---AVAAYRRALELQP 554
Query: 137 KNIRALYGLALSC 149
IR+ Y L +SC
Sbjct: 555 GYIRSRYNLGISC 567
>sp|Q0HA38|TT21B_MOUSE Tetratricopeptide repeat protein 21B OS=Mus musculus GN=Ttc21b PE=2
SV=1
Length = 1315
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 74 LCDLYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAIN 133
+ DL + DY +AV+ +++L P N + R D+L G LE++ +LMA
Sbjct: 957 MADLMFRKQDYEQAVYHLQQLLDRKPDNFMTLSRLIDLLRRCGKLEDVP---RFFLMAEK 1013
Query: 134 LNEK 137
N +
Sbjct: 1014 HNSR 1017
>sp|Q2M2R8|PEX5_RAT Peroxisomal targeting signal 1 receptor OS=Rattus norvegicus
GN=Pex5 PE=1 SV=2
Length = 640
Score = 33.1 bits (74), Expect = 1.2, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 77 LYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE 136
L+ G+Y KAV C P+++LL + L E A++ Y A+ L
Sbjct: 498 LFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEE---AVAAYRRALELQP 554
Query: 137 KNIRALYGLALSC 149
IR+ Y L +SC
Sbjct: 555 GYIRSRYNLGISC 567
>sp|P50542|PEX5_HUMAN Peroxisomal targeting signal 1 receptor OS=Homo sapiens GN=PEX5
PE=1 SV=3
Length = 639
Score = 33.1 bits (74), Expect = 1.4, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 77 LYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE 136
L+ G+Y KAV C P+++LL + L E A++ Y A+ L
Sbjct: 497 LFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEE---AVAAYRRALELQP 553
Query: 137 KNIRALYGLALSC 149
IR+ Y L +SC
Sbjct: 554 GYIRSRYNLGISC 566
>sp|O70525|PEX5_CAVPO Peroxisomal targeting signal 1 receptor OS=Cavia porcellus GN=PEX5
PE=2 SV=1
Length = 640
Score = 32.7 bits (73), Expect = 1.5, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 77 LYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE 136
L+ G+Y KAV C P+++LL + L E A++ Y A+ L
Sbjct: 498 LFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEE---AVAAYRRALELQP 554
Query: 137 KNIRALYGLALSC 149
IR+ Y L +SC
Sbjct: 555 GYIRSRYNLGISC 567
>sp|O09012|PEX5_MOUSE Peroxisomal targeting signal 1 receptor OS=Mus musculus GN=Pex5
PE=2 SV=2
Length = 639
Score = 32.3 bits (72), Expect = 2.0, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 77 LYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE 136
L+ G+Y KAV C P+++L+ + L E A++ Y A+ L
Sbjct: 497 LFNLSGEYDKAVDCFTAALSVRPNDYLMWNKLGATLANGNQSEE---AVAAYRRALELQP 553
Query: 137 KNIRALYGLALSC 149
IR+ Y L +SC
Sbjct: 554 GYIRSRYNLGISC 566
>sp|Q1RMV0|PEX5_BOVIN Peroxisomal targeting signal 1 receptor OS=Bos taurus GN=PEX5 PE=2
SV=1
Length = 640
Score = 32.3 bits (72), Expect = 2.2, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 77 LYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE 136
L+ G+Y KAV C P ++LL + L E A++ Y A+ L
Sbjct: 498 LFNLSGEYDKAVDCFTAALSVRPDDYLLWNKLGATLANGNQSEE---AVAAYRRALELQP 554
Query: 137 KNIRALYGLALSC 149
IR+ Y L +SC
Sbjct: 555 GYIRSRYNLGISC 567
>sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC OS=Arabidopsis
thaliana GN=SEC PE=2 SV=1
Length = 977
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Query: 27 IKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQELCDLYLSEGDYAK 86
++I T A + + A++ E +K + + L ++Y + G +
Sbjct: 216 VRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTE 275
Query: 87 AVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLA 146
A+ C + P++ + A I Y QG L +LAI HY A++ + + + A L
Sbjct: 276 AIMCYQHALQMRPNSAMAFGNIASIYYEQGQL---DLAIRHYKQALSRDPRFLEAYNNLG 332
>sp|P35056|PEX5_YEAST Peroxisomal targeting signal receptor OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PEX5 PE=1 SV=1
Length = 612
Score = 32.0 bits (71), Expect = 2.6, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 77 LYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE 136
L+ ++ D+ K + C E +P++ L+ R L E AI Y A+ L
Sbjct: 466 LFYTKDDFDKTIDCFESALRVNPNDELMWNRLGASLANSNRSEE---AIQAYHRALQLKP 522
Query: 137 KNIRALYGLALSCHQV 152
+RA Y LA+S +
Sbjct: 523 SFVRARYNLAVSSMNI 538
>sp|Q86TV6|TTC7B_HUMAN Tetratricopeptide repeat protein 7B OS=Homo sapiens GN=TTC7B PE=1
SV=3
Length = 843
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 56/121 (46%), Gaps = 21/121 (17%)
Query: 46 AKNKIPEAIKELTEYLK----------KFMTDQETWQELCDLYLSEGDYAKAVFCMEELF 95
A +++ +A+ E+ L+ +MT + W ++Y+ G A+A C +E
Sbjct: 664 AASRVEQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAA 723
Query: 96 LHHPHNHLLHQRYADILYTQGGLENIELAISH----YLMAINLNEKNIRALYGLALSCHQ 151
P +H ++LY +G + + ++ Y A+ ++ +++++ LAL HQ
Sbjct: 724 NLFPMSH-------NVLYMRGQIAELRGSMDEARRWYEEALAISPTHVKSMQRLALILHQ 776
Query: 152 V 152
+
Sbjct: 777 L 777
>sp|Q0K607|RPOC_CUPNH DNA-directed RNA polymerase subunit beta' OS=Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
GN=rpoC PE=3 SV=1
Length = 1415
Score = 32.0 bits (71), Expect = 3.2, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 27 IKIDETNTAARKRKICILKAKNKIPEAIKELTEYLKKFMTDQETWQELCDLYLSEGD-YA 85
I ID+ +K KI I +A K+ E K+ Y+ +TDQE + + D++ + GD
Sbjct: 645 IAIDDMLVPPQKEKI-IAEASAKVKEYDKQ---YMSGLVTDQERYNNVVDIWGAAGDQVG 700
Query: 86 KAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMA 131
KA+ ME+L ++ D++ +G E S Y+MA
Sbjct: 701 KAM--MEQL------------QHEDVVDREGKTVKQESFNSIYMMA 732
>sp|Q6BM14|PEX5_DEBHA Peroxisomal targeting signal receptor OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=PEX5 PE=3 SV=2
Length = 603
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 77 LYLSEGDYAKAVFCMEELFLHHPHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNE 136
L+ + D+ K + C + P + +L R L E A+ Y A+ L
Sbjct: 458 LFYANEDFDKTIDCFKAALSIKPDDAVLWNRLGASLANSN---RSEEAVDAYFKALELKP 514
Query: 137 KNIRALYGLALSC 149
+RA Y L +SC
Sbjct: 515 TFVRARYNLGVSC 527
>sp|Q3UV71|TMTC1_MOUSE Transmembrane and TPR repeat-containing protein 1 OS=Mus musculus
GN=Tmtc1 PE=2 SV=2
Length = 942
Score = 31.6 bits (70), Expect = 4.1, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 99 PHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLTSAKC 158
PHN +H YA+ L QG N E AI HY A+ L ++ AL L + + + AK
Sbjct: 540 PHNAKVHYNYANFLKDQG--RNKE-AIYHYRTALKLYPRHASALNNLG-TLTKDMAEAKM 595
Query: 159 SAAKKKEISKQMMWVSKHLARQYEEQQGNTETLTELMSALQ 199
K ++ Q +L + Q+ E + L +++
Sbjct: 596 YYQKALQLHPQHNRALFNLGNLLKSQEKTEEAIMLLKESIK 636
Score = 31.6 bits (70), Expect = 4.1, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 43 ILKAKNKIPEAIKELTEYLKKFMTDQETWQELCDLYLSEGDYAKAVFCMEELFLHHPHNH 102
+LK++ K EAI L E +K + + L L + + +A + + P +
Sbjct: 617 LLKSQEKTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSS 676
Query: 103 LLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLA 146
LH YA L G E A++HY AI L+ + A+ L
Sbjct: 677 DLHNNYAVFLVDSGFPEK---AVAHYQQAIQLSPSHHVAVVNLG 717
>sp|O94556|APC8_SCHPO Anaphase-promoting complex subunit 8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cut23 PE=1 SV=2
Length = 565
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 118 LENIELAISHYLMAINLNEKNIRALYGLA 146
L+N AI Y +A+++N K+ RA YGL
Sbjct: 385 LKNTHAAIESYRLAVDVNRKDYRAWYGLG 413
>sp|Q8IUR5|TMTC1_HUMAN Transmembrane and TPR repeat-containing protein 1 OS=Homo sapiens
GN=TMTC1 PE=1 SV=3
Length = 882
Score = 31.2 bits (69), Expect = 5.2, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 99 PHNHLLHQRYADILYTQGGLENIELAISHYLMAINLNEKNIRALYGLALSCHQVLTSAKC 158
PHN +H YA+ L QG N E AI HY A+ L ++ AL L + + AK
Sbjct: 480 PHNAKVHYNYANFLKDQG--RNKE-AIYHYRTALKLYPRHASALNNLG-TLTRDTAEAKM 535
Query: 159 SAAKKKEISKQMMWVSKHLARQYEEQQGNTETLTELMSALQ 199
+ ++ Q +L + Q+ E +T L +++
Sbjct: 536 YYQRALQLHPQHNRALFNLGNLLKSQEKKEEAITLLKDSIK 576
>sp|Q80ZX8|SPAG1_MOUSE Sperm-associated antigen 1 OS=Mus musculus GN=Spag1 PE=1 SV=1
Length = 901
Score = 30.4 bits (67), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 15 RYEEALEHLETIIKIDETNTAARKRKICILKAKNKIPEAIKELTEYLK 62
R+ ALE E +++D N A R+ K +NK+ EA+ +L + L+
Sbjct: 261 RWSSALEDCEKALELDPGNVKALLRRATTYKHQNKLQEAVDDLRKVLQ 308
>sp|P18640|BXC1_CLOBO Botulinum neurotoxin type C1 OS=Clostridium botulinum PE=1 SV=2
Length = 1291
Score = 30.4 bits (67), Expect = 8.1, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 79 LSEGDYAKAVFCMEE-LFLHHPHNHLLHQRYA 109
+ EG ++K+ FCM+ L L H NH +H Y
Sbjct: 209 VGEGRFSKSEFCMDPILILMHELNHAMHNLYG 240
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,521,882
Number of Sequences: 539616
Number of extensions: 2658378
Number of successful extensions: 9682
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 9598
Number of HSP's gapped (non-prelim): 115
length of query: 201
length of database: 191,569,459
effective HSP length: 112
effective length of query: 89
effective length of database: 131,132,467
effective search space: 11670789563
effective search space used: 11670789563
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)