BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12643
(144 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 97/157 (61%), Gaps = 14/157 (8%)
Query: 1 MSDYFDEFNIAPLGPGET--PNHMLHLARLLR-----DFGMNPY-EFNDELPPPASKAFV 52
M+ YFDE N P P E N +L LAR L D G + E++ LPPPASK V
Sbjct: 1 MASYFDEHNCEPTVPEEQYRQNALLELARSLLSGMDIDLGAVDFTEWDQRLPPPASKKVV 60
Query: 53 KSLQEVTSHEPESS-----CPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLC 107
+SL +VT PE + CP+CL F GE+ ++L C+H FHS CILPWL KT++CPLC
Sbjct: 61 ESLPKVTV-TPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLC 119
Query: 108 RHEFKTDDADYEAYKVQKKREKEREGEIENLHNAMFS 144
RHE TD DYE +K +K R +++E +E LH AM++
Sbjct: 120 RHELPTDSPDYEEFKQEKARRQQKEHRLECLHGAMYT 156
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 96/157 (61%), Gaps = 14/157 (8%)
Query: 1 MSDYFDEFNIAPLGPGET--PNHMLHLARLLR---DFGMNPYEFND---ELPPPASKAFV 52
M+ YFDE + P P E N +L LAR L D ++ +D LPPPA+KA V
Sbjct: 1 MASYFDEHDCEPTNPEEQYRQNALLELARSLMQGLDIDSGSFDLSDWDQRLPPPAAKAVV 60
Query: 53 KSLQEVTSHEPESS-----CPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLC 107
+SL V PE + CP+CL F ES +++ CKH FH+ CILPWL KT++CPLC
Sbjct: 61 QSLP-VVIISPEQADKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPLC 119
Query: 108 RHEFKTDDADYEAYKVQKKREKEREGEIENLHNAMFS 144
R E TD+ADYE +K K+R ++RE +E+LH AM++
Sbjct: 120 RLELPTDNADYEEFKKDKERRRQREHRLEDLHGAMYT 156
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 95/167 (56%), Gaps = 25/167 (14%)
Query: 1 MSDYFDEFNIAPLGPGETP--NHMLHLARLLR-------------------DFGMNPYEF 39
M+ YFDE + PL P N +L LAR +R D G+ +E
Sbjct: 1 MASYFDEHDCEPLNPEREARNNMLLELARRVRGAWSWAPGGRSLFNRMDFEDLGLVDWEH 60
Query: 40 NDELPPPASKAFVKSLQE--VTSHEPESSCPICLKLFLVGESAKKLDCKHTFHSTCILPW 97
+ LPPPA+KA V+SL ++S + + CP+CL F E+ ++ C H FHS CILPW
Sbjct: 61 H--LPPPAAKAVVESLPRTVISSAKADLKCPVCLLEFEAEETVIEMPCHHLFHSNCILPW 118
Query: 98 LEKTSTCPLCRHEFKTDDADYEAYKVQKKREKEREGEIENLHNAMFS 144
L KT++CPLCRHE TDD YE +K K R ++++ +ENLH AM++
Sbjct: 119 LSKTNSCPLCRHELPTDDDSYEEHKKDKARRQQQQHRLENLHGAMYT 165
>sp|Q6AXU4|RN181_RAT E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181
PE=1 SV=1
Length = 165
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 94/167 (56%), Gaps = 25/167 (14%)
Query: 1 MSDYFDEFNIAPLGPGETP--NHMLHLARLLR-------------------DFGMNPYEF 39
M+ YFDE + PL P N +L LAR +R D G+ +E
Sbjct: 1 MASYFDEHDCEPLNPEREARNNMLLELARRVRGAWSWAPGSRSLFNRMDFEDLGLVDWEH 60
Query: 40 NDELPPPASKAFVKSLQE--VTSHEPESSCPICLKLFLVGESAKKLDCKHTFHSTCILPW 97
+ LPPPA+KA V+SL + S + E CP+CL F E+ ++ C H FHS CILPW
Sbjct: 61 H--LPPPAAKAVVESLPRTVIRSSKAELKCPVCLLEFEEEETVIEMPCHHLFHSNCILPW 118
Query: 98 LEKTSTCPLCRHEFKTDDADYEAYKVQKKREKEREGEIENLHNAMFS 144
L KT++CPLCRHE TDD YE +K K R ++++ +ENLH AM++
Sbjct: 119 LSKTNSCPLCRHELPTDDDSYEEHKKDKARRQQQQHRLENLHGAMYT 165
>sp|Q3T0W3|RN181_BOVIN E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2
SV=1
Length = 153
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 93/154 (60%), Gaps = 11/154 (7%)
Query: 1 MSDYFDEFNIAPLGPGETP--NHMLHLARLL------RDFGMNPYEFNDELPPPASKAFV 52
M+ YFDE + PL P N +L LAR L D G+ +++ LPPPA+K V
Sbjct: 1 MASYFDEHDCEPLDRERDPRTNMLLELARSLFNRMDFEDLGL-VVDWDHHLPPPAAKTAV 59
Query: 53 KSLQE--VTSHEPESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRHE 110
++L + + E CP+CL F E+A ++ C H FHS CILPWL KT++CPLCRHE
Sbjct: 60 ENLPRTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSCPLCRHE 119
Query: 111 FKTDDADYEAYKVQKKREKEREGEIENLHNAMFS 144
TDD YE +K K R+++++ +ENLH AM++
Sbjct: 120 LPTDDDTYEEHKRDKARKQQQKHRLENLHGAMYT 153
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 101/157 (64%), Gaps = 14/157 (8%)
Query: 1 MSDYFDEFNIAPLGPGET--PNHMLHLARLLR-----DFG-MNPYEFNDELPPPASKAFV 52
M+ YFDE N P P E N +L LAR L D G ++ E++ LPPPA+K V
Sbjct: 1 MASYFDEHNCEPTVPEEQYRQNALLELARSLLSGMDIDLGALDFTEWDQRLPPPAAKKVV 60
Query: 53 KSLQEVTSHEPESS-----CPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLC 107
+SL +VT PE + CP+CL F GE+ ++L C+H FHS+CILPWL KT++CPLC
Sbjct: 61 ESLPKVTV-TPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLC 119
Query: 108 RHEFKTDDADYEAYKVQKKREKEREGEIENLHNAMFS 144
RHE TD +YE YK +K+R +++E +E LH+AM++
Sbjct: 120 RHELPTDSPEYEEYKQEKERRQQKEHRLECLHDAMYT 156
>sp|Q9P0P0|RN181_HUMAN E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1
SV=1
Length = 153
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 94/154 (61%), Gaps = 11/154 (7%)
Query: 1 MSDYFDEFNIAPLGPGE--TPNHMLHLARLL------RDFGMNPYEFNDELPPPASKAFV 52
M+ YFDE + P P + N +L LAR L D G+ +++ LPPPA+K V
Sbjct: 1 MASYFDEHDCEPSDPEQETRTNMLLELARSLFNRMDFEDLGLV-VDWDHHLPPPAAKTVV 59
Query: 53 KSLQE--VTSHEPESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRHE 110
++L + + E CP+CL F E+A ++ C H FHS+CILPWL KT++CPLCR+E
Sbjct: 60 ENLPRTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYE 119
Query: 111 FKTDDADYEAYKVQKKREKEREGEIENLHNAMFS 144
TDD YE ++ K R+++++ +ENLH AM++
Sbjct: 120 LPTDDDTYEEHRRDKARKQQQQHRLENLHGAMYT 153
>sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila
melanogaster GN=CG7694 PE=2 SV=1
Length = 147
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
Query: 1 MSDYFDEFNIAPLGPGETPNHMLHLARLLRDFGMNPYEFNDELPPPASKAFVK-SLQEVT 59
MSDYF+E P GP + +L RL MN + E+P + +A ++ + E+
Sbjct: 1 MSDYFEELGHEPTGPLGANDLARNLKRLQVLAIMNGIDMEIEVPEASKRAILELPVHEIV 60
Query: 60 SHEP--ESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRHEFKTDDAD 117
+ + C +C + G+ + L CKH FH CIL WL+KT++CPLCR+E +TDD
Sbjct: 61 KSDEGGDLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYELETDDPV 120
Query: 118 YEAYKVQKKREKEREGEIENLHNAMFS 144
YE + ++ E R L ++MF
Sbjct: 121 YEELRRFRQDEANRRERENTLLDSMFG 147
>sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8
PE=1 SV=1
Length = 334
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 6/87 (6%)
Query: 45 PPASKAFVKSLQ--EVTSHEPESS--CPICLKLFLVGESAKKLDCKHTFHSTCILPWLEK 100
PPA+K+ +++L+ EV+S E E C +C ++GE+ KKL C H +H CI+PWL
Sbjct: 231 PPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGT 290
Query: 101 TSTCPLCRHEFKTDDADYEAYKVQKKR 127
++CP+CR + +TDDA+YE + +KKR
Sbjct: 291 RNSCPVCRFQLETDDAEYE--EERKKR 315
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 22/124 (17%)
Query: 1 MSDYFDEFNIAPLGPGETPNHMLHLARLLRDFGMNPYEFNDELPPPASKAFVKSLQEVTS 60
+ DYF +GPG L +L++ N + N PPASK+ +++L V
Sbjct: 170 IGDYF-------IGPG--------LEQLIQQLAEN--DPNRYGTPPASKSAIEALPLVNI 212
Query: 61 HEPE-----SSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRHEFKTDD 115
+ + C +C+ F G AK++ CKH +H C+LPWLE ++CP+CRHE TDD
Sbjct: 213 TKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDD 272
Query: 116 ADYE 119
DYE
Sbjct: 273 PDYE 276
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 12/116 (10%)
Query: 16 GETPNHMLHLARLLRDFGMNPYEFNDELPP---PASKAFVKSLQEVTSHE-------PES 65
GET N M L L + P +D PP PASK V+ L + E E+
Sbjct: 171 GETANLMQELINGLD--MIIPDILDDGGPPRAPPASKEVVEKLPVIIFTEELLKKFGAEA 228
Query: 66 SCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRHEFKTDDADYEAY 121
C IC + ++G+ ++L CKHTFH C+ PWL++ ++CP+CRHE TDD YE +
Sbjct: 229 ECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDQKYENW 284
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 45 PPASKAFVKSLQEVTSHEPE-----SSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLE 99
PPASK+ + +L V + + C +C+ F G K++ CKH FH C+LPWLE
Sbjct: 189 PPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLE 248
Query: 100 KTSTCPLCRHEFKTDDADYEAYKVQKKREKEREGEIENLHNAMFS 144
++CP+CR E TDD DYE + + +G +E FS
Sbjct: 249 LHNSCPVCRFELPTDDPDYENRSQGSQGSGDGQGSVEGQQTPRFS 293
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 38 EFNDELPPPASKAFVKSLQEVTSHEPESS----CPICLKLFLVGESAKKLDCKHTFHSTC 93
+F + PPPA +++L + E CP+C + + VGES ++L C H FH+ C
Sbjct: 194 QFENTGPPPADTEKIQALPTIQITEEHVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDC 253
Query: 94 ILPWLEKTSTCPLCRHEFKTDDA 116
I+PWLE+ TCP+CR +
Sbjct: 254 IIPWLEQHDTCPVCRKSLSGQNT 276
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 38 EFNDELPPPASKAFVKSLQEVTSHEPESS----CPICLKLFLVGESAKKLDCKHTFHSTC 93
+F + PPPA +++L + E CP+C + + VGES ++L C H FH+ C
Sbjct: 195 QFENTGPPPADTDKIQALPTIQITEEHVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDC 254
Query: 94 ILPWLEKTSTCPLCRHEFKTDDA 116
I+PWLE+ TCP+CR +
Sbjct: 255 IIPWLEQHDTCPVCRKSLSGQNT 277
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 38 EFNDELPPPASKAFVKSLQEVTSHEPESS----CPICLKLFLVGESAKKLDCKHTFHSTC 93
+F + PPPA K +++L V E CP+C + + +GES ++L C H FH +C
Sbjct: 198 QFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSC 257
Query: 94 ILPWLEKTSTCPLCR 108
I+PWLE+ +CP+CR
Sbjct: 258 IVPWLEQHDSCPVCR 272
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 44 PPPASKAFVKSLQEVTSHEPESS----CPICLKLFLVGESAKKLDCKHTFHSTCILPWLE 99
PPPA K + SL VT + + + CP+C + + V E ++L C H FHS+CI+PWLE
Sbjct: 202 PPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLE 261
Query: 100 KTSTCPLCRHEFKTDDA 116
TCP+CR +D+
Sbjct: 262 LHDTCPVCRKSLNGEDS 278
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 44 PPPASKAFVKSLQEVTSHEPESS----CPICLKLFLVGESAKKLDCKHTFHSTCILPWLE 99
PPPA K + SL VT + + CP+C + + V E ++L C H FHS+CI+PWLE
Sbjct: 201 PPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLE 260
Query: 100 KTSTCPLCRHEFKTDDADYEAYKVQ 124
TCP+CR +D+ ++ +
Sbjct: 261 LHDTCPVCRKSLNGEDSTRQSQSTE 285
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 38 EFNDELPPPASKAFVKSLQEVTSHEPESS----CPICLKLFLVGESAKKLDCKHTFHSTC 93
+F + PPPA +++L + E CP+C + + VGE ++L C H FH+ C
Sbjct: 195 QFENTGPPPADNEKIQALPTIQITEEHVGSGLECPVCKEDYTVGECVRQLPCNHLFHNDC 254
Query: 94 ILPWLEKTSTCPLCRHEFKTDDA 116
I+PWLE+ TCP+CR +
Sbjct: 255 IIPWLEQHDTCPVCRKSLSGQNT 277
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 38 EFNDELPPPASKAFVKSLQEVTSHEPESS----CPICLKLFLVGESAKKLDCKHTFHSTC 93
+F + PPPA K +++L V E CP+C + +GE ++L C H FH C
Sbjct: 196 QFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGC 255
Query: 94 ILPWLEKTSTCPLCR 108
I+PWLE+ +CP+CR
Sbjct: 256 IVPWLEQHDSCPVCR 270
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 38 EFNDELPPPASKAFVKSLQEVTSHEPESS----CPICLKLFLVGESAKKLDCKHTFHSTC 93
+F + PPPA K +++L V E CP+C + +GE ++L C H FH C
Sbjct: 199 QFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYGLGEHVRQLPCNHLFHDGC 258
Query: 94 ILPWLEKTSTCPLCR 108
I+PWLE+ +CP+CR
Sbjct: 259 IVPWLEQHDSCPVCR 273
>sp|O55176|PJA1_MOUSE E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus GN=Pja1 PE=1
SV=3
Length = 578
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 45 PPASKAFVKSLQEVTSHE------PESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWL 98
PPASK + +L E+ E E CPIC ++ GE A +L C H FH C+ WL
Sbjct: 502 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 561
Query: 99 EKTSTCPLCR 108
+K+ TCP+CR
Sbjct: 562 QKSGTCPVCR 571
>sp|Q8NG27|PJA1_HUMAN E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens GN=PJA1 PE=1
SV=2
Length = 643
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 45 PPASKAFVKSLQEVTSHE------PESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWL 98
PPASK + +L E+ E E CPIC ++ GE A +L C H FH C+ WL
Sbjct: 567 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 626
Query: 99 EKTSTCPLCR 108
+K+ TCP+CR
Sbjct: 627 QKSGTCPVCR 636
>sp|Q5R4R1|PJA2_PONAB E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2
SV=1
Length = 708
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 45 PPASKAFVKSLQEV------TSHEPESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWL 98
PPASK + L E T+ E CPIC ++ + A +L C H FH C+ WL
Sbjct: 606 PPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWL 665
Query: 99 EKTSTCPLCRHEF 111
+K+ TCP+CR F
Sbjct: 666 QKSGTCPVCRRHF 678
>sp|Q80U04|PJA2_MOUSE E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1
SV=2
Length = 707
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 45 PPASKAFVKSLQEV------TSHEPESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWL 98
PPASK + L E T+ E CPIC ++ + A +L C H FH C+ WL
Sbjct: 605 PPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWL 664
Query: 99 EKTSTCPLCRHEF 111
+K+ TCP+CR F
Sbjct: 665 QKSGTCPVCRRHF 677
>sp|O43164|PJA2_HUMAN E3 ubiquitin-protein ligase Praja-2 OS=Homo sapiens GN=PJA2 PE=1
SV=4
Length = 708
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 45 PPASKAFVKSLQEV------TSHEPESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWL 98
PPASK + L E T+ E CPIC ++ + A +L C H FH C+ WL
Sbjct: 606 PPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWL 665
Query: 99 EKTSTCPLCRHEF 111
+K+ TCP+CR F
Sbjct: 666 QKSGTCPVCRRHF 678
>sp|Q63364|PJA2_RAT E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2
PE=2 SV=1
Length = 707
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 45 PPASKAFVKSLQEV------TSHEPESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWL 98
PPASK + L E T+ E CPIC ++ + A +L C H FH C+ WL
Sbjct: 605 PPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWL 664
Query: 99 EKTSTCPLCRHEF 111
+K+ TCP+CR F
Sbjct: 665 QKSGTCPVCRRHF 677
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 62 EPESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCR 108
E E +C +CL+ VGE + L C H FH+ CI PWL + TCP+C+
Sbjct: 206 EDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCK 252
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 65 SSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRH 109
S C ICL+ ++ GE + + C H FH C+ PWL + TCP CRH
Sbjct: 200 SDCAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRH 244
>sp|Q9M0C3|ATL14_ARATH RING-H2 finger protein ATL14 OS=Arabidopsis thaliana GN=ATL14 PE=2
SV=1
Length = 176
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 19/104 (18%)
Query: 38 EFNDELPPPASKAFVKSLQEVTSHEPES-----SCPICLKLFLVGESAKKL-DCKHTFHS 91
E++D L P VK L + EP S C +C+ F G+ +KL C H FH
Sbjct: 85 EYSDGLSPRC----VKRLPQFKYCEPSSEYGGDDCVVCIDGFRQGQWCRKLPRCGHVFHR 140
Query: 92 TCILPWLEKTSTCPLCRHEFKTDDADYEAYKVQKKREKEREGEI 135
C+ WL K STCP+CR Y+ ++ R +GEI
Sbjct: 141 KCVDLWLIKVSTCPICRD---------RVYRFEEGRRWRPQGEI 175
>sp|Q08D68|ZNRF3_XENTR E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis GN=znrf3
PE=2 SV=1
Length = 853
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 67 CPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRH 109
C ICL+ ++ GE + + C H FH C+ PWL + TCP CRH
Sbjct: 266 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRH 308
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 62 EPESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCR 108
+ E C IC+++F + + +L CKH FH CI PWL TC +CR
Sbjct: 391 DEEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICR 437
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 65 SSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRHEFKTDDADYEAYKVQ 124
S C ICL+ ++ GE + + C H FH C+ PWL + TCP CRH + A V+
Sbjct: 288 SDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPGAVCVE 347
>sp|Q9ZV51|ATL56_ARATH RING-H2 finger protein ATL56 OS=Arabidopsis thaliana GN=ATL56 PE=2
SV=1
Length = 181
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 48 SKAFVKSLQEVTSHEP------ESSCPICLKLFLVGESAKKL-DCKHTFHSTCILPWLEK 100
S FVK L + EP ES C +C F G+ + L C H FH C+ WL K
Sbjct: 85 SSRFVKKLPQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLK 144
Query: 101 TSTCPLCRHEFKTDDAD 117
STCP+CR + + D
Sbjct: 145 ASTCPICRARVRLWEED 161
>sp|P30631|YOUD_CAEEL Uncharacterized RING finger protein ZK637.14 OS=Caenorhabditis
elegans GN=ZK637.14 PE=4 SV=2
Length = 161
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 77 GESAKKLDCKHTFHSTCILPWLEKTSTCPLCRHEFKTDDADYEAYKVQKKREKEREGEIE 136
G + + CKH FH C+ WLE TCP CR + KTD ++ E+ER+ +E
Sbjct: 103 GTTVIVMPCKHRFHYFCLTLWLEAQQTCPTCRQKVKTD---------KEVEEEERQRNLE 153
Query: 137 NLHNAMFS 144
LH++M+
Sbjct: 154 ELHDSMYG 161
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 67 CPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRH 109
C ICL+ ++ GE + + C H FH C+ PWL + TCP CRH
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRH 309
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 67 CPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRHEFKTDDADYEAYKVQ 124
C ICL+ ++ GE + + C H FH C+ PWL + TCP CRH + A V+
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVE 350
>sp|Q9LUZ9|ATL63_ARATH RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2
SV=1
Length = 308
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 67 CPICLKLFLVGESAKKL-DCKHTFHSTCILPWLEKTSTCPLCRHEFKTDDADYEAYKV 123
C ICL L+ G+ +KL +C H FH CI WL STCPLCR +D E K+
Sbjct: 138 CVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEENLKL 195
>sp|Q9ZU51|RHA2B_ARATH Probable E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana
GN=RHA2B PE=1 SV=2
Length = 147
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 60 SHEPESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTS-TCPLCR-------HEF 111
S S C +CL GE +KLDC+H FH C+ WL+ + CPLCR H+
Sbjct: 67 SDNAASDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLLPHHHQG 126
Query: 112 KTDDADYEAYKVQK 125
DA A+ ++
Sbjct: 127 HGSDASISAFPLRS 140
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 57 EVTSHEPE-SSCPICLKLFLVGESAKKL-DCKHTFHSTCILPWLEKTSTCPLCR 108
+T PE SC +CL+ F VGE+ + L C H FH CI WL + ++CPLCR
Sbjct: 165 RITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 218
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 67 CPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCR 108
C IC++ + ++ + L CKH FH CI PWL + TCP+C+
Sbjct: 303 CAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCK 344
>sp|Q9ZT50|RHA2A_ARATH E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana GN=RHA2A
PE=1 SV=1
Length = 155
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 65 SSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTS-TCPLCRHEFKTDD 115
S C +CL GE +KL+C+H FH C+ WL + + TCPLCR +DD
Sbjct: 84 SDCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVSDD 135
>sp|Q20798|HRD1_CAEEL E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis elegans
GN=sel-11 PE=3 SV=1
Length = 610
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 64 ESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCR 108
+++C IC + V S K+L C H FH+ C+ W ++ TCP CR
Sbjct: 289 DATCIICREEMTVDASPKRLPCSHVFHAHCLRSWFQRQQTCPTCR 333
>sp|Q8GUU2|RIE1_ARATH E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1
PE=2 SV=1
Length = 359
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 64 ESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRHEFKTDDAD 117
++ C ICL + G L C H FHSTCI+ WL+ +TCPLC++ D
Sbjct: 304 DADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKGTTD 357
>sp|Q29RU0|RN128_BOVIN E3 ubiquitin-protein ligase RNF128 OS=Bos taurus GN=RNF128 PE=2
SV=1
Length = 431
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 66 SCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCR 108
SC +C++L+ + + L C H FH TC+ PWL + TCP+C+
Sbjct: 279 SCAVCIELYKPNDLVRILTCNHVFHKTCVDPWLLEHRTCPMCK 321
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 38 EFNDELPPPASKAFVKSLQEVTSHEPES--SCPICLKLFLVGESAKKLDCKHTFHSTCIL 95
E +D+ P +K + +L + E ++ +C +C+ + G +KL C H +H CI
Sbjct: 539 EDDDDQPRGLTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCID 598
Query: 96 PWLEKTSTCPLCR 108
WL + STCP+CR
Sbjct: 599 RWLSENSTCPICR 611
>sp|G3X9R7|RN148_MOUSE RING finger protein 148 OS=Mus musculus GN=Rnf148 PE=2 SV=1
Length = 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 64 ESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCR 108
E SC +C ++ + + L CKH FH TCI PWL TCP+C+
Sbjct: 266 EDSCVVCFDMYKAQDVIRILTCKHFFHKTCIDPWLLAHRTCPMCK 310
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 67 CPICLKLFLVGESAKKL-DCKHTFHSTCILPWLEKTSTCPLCRHE 110
C +CL L ++A+ L +CKH FH +C+ WL STCP+CR E
Sbjct: 100 CAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTE 144
>sp|Q6ZSG1|RN165_HUMAN RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1
Length = 346
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 67 CPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRHEFKTD 114
C ICL + GE ++L C H FH C+ WL + CP+CR + +T
Sbjct: 294 CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIETQ 341
>sp|Q9D304|RN128_MOUSE E3 ubiquitin-protein ligase RNF128 OS=Mus musculus GN=Rnf128 PE=1
SV=1
Length = 428
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 66 SCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCR 108
SC +C++L+ + + L C H FH TC+ PWL + TCP+C+
Sbjct: 276 SCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCK 318
>sp|E9QAU8|RN165_MOUSE RING finger protein 165 OS=Mus musculus GN=Rnf165 PE=2 SV=1
Length = 347
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 64 ESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRHEFKT 113
+ C ICL + GE ++L C H FH C+ WL + CP+CR + +T
Sbjct: 292 DEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 341
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,977,534
Number of Sequences: 539616
Number of extensions: 2368087
Number of successful extensions: 7507
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 282
Number of HSP's that attempted gapping in prelim test: 6939
Number of HSP's gapped (non-prelim): 752
length of query: 144
length of database: 191,569,459
effective HSP length: 106
effective length of query: 38
effective length of database: 134,370,163
effective search space: 5106066194
effective search space used: 5106066194
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)