Diaphorina citri psyllid: psy12643


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140----
MSDYFDEFNIAPLGPGETPNHMLHLARLLRDFGMNPYEFNDELPPPASKAFVKSLQEVTSHEPESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRHEFKTDDADYEAYKVQKKREKEREGEIENLHNAMFS
cccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHcccEEcccccccccccccccccccccEEcccccccccccHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccc
MSDYFD*FNIAPL*PGETPNHMLHLARLLRDFGMNPYEF***********************PESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRHEFKTDD*****************************
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MSDYFDEFNIAPLGPGETPNHMLHLARLLRDFGMNPYEFNDELPPPASKAFVKSLQEVTSHEPESSCPICLKLFLVGESAKKLDCKHTFHSTCILPWLEKTSTCPLCRHEFKTDDADYEAYKVQKKREKEREGEIENLHNAMFS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
E3 ubiquitin-protein ligase RNF181 E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.confidentQ9CY62
E3 ubiquitin-protein ligase RNF181 E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.confidentQ5M974
E3 ubiquitin-protein ligase RNF181 E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.confidentQ7ZW78

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0004842 [MF]ubiquitin-protein ligase activityprobableGO:0019787, GO:0016879, GO:0016881, GO:0003824, GO:0003674, GO:0016874
GO:0043231 [CC]intracellular membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0008270 [MF]zinc ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0051865 [BP]protein autoubiquitinationprobableGO:0071704, GO:0044267, GO:0044238, GO:0044260, GO:0032446, GO:0019538, GO:0009987, GO:0070647, GO:0006464, GO:0043170, GO:0016567, GO:0043412, GO:0036211, GO:0008150, GO:0044237, GO:0008152

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2L0B, chain A
Confidence level:very confident
Coverage over the Query: 38-113
View the alignment between query and template
View the model in PyMOL