RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy12645
         (218 letters)



>d1eema1 a.45.1.1 (A:103-241) Class omega GST {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 139

 Score = 28.3 bits (62), Expect = 0.37
 Identities = 15/89 (16%), Positives = 22/89 (24%), Gaps = 1/89 (1%)

Query: 81  WWYFFSKFTEFFDTFFFVMRKKYDQVSTLHVIHHGVMPLSTWFGVKFTPGGHSTFFGLLN 140
               FSK      +F    + K D              L      K T         +++
Sbjct: 14  ILELFSKVPSLVGSFIR-SQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMID 72

Query: 141 TFIQFVCILIHAFQLFFIECDYPKAFAWW 169
             I      + A +L       PK   W 
Sbjct: 73  YLIWPWFERLEAMKLNECVDHTPKLKLWM 101


>d1knca_ a.152.1.1 (A:) Antioxidant defense protein AhpD
           {Mycobacterium tuberculosis [TaxId: 1773]}
          Length = 174

 Score = 27.5 bits (61), Expect = 1.0
 Identities = 9/46 (19%), Positives = 14/46 (30%), Gaps = 6/46 (13%)

Query: 30  SLQAIIIIINVASSMPKIQAMDGAWYRDYSLRCEPVDYSTTPKAMR 75
           S  A    +  A+ M     M+  +YR          Y      +R
Sbjct: 63  SAAARHAALGAAAIM----GMNNVFYRGRGF--LEGRYDDLRPGLR 102


>d1m1la_ d.260.1.1 (A:) Suppressor of Fused, N-terminal domain
          {Human (Homo sapiens) [TaxId: 9606]}
          Length = 236

 Score = 26.4 bits (58), Expect = 2.5
 Identities = 7/30 (23%), Positives = 12/30 (40%)

Query: 45 PKIQAMDGAWYRDYSLRCEPVDYSTTPKAM 74
          P + A+ G   R Y  +  P+  +   K  
Sbjct: 6  PGLHAIYGECRRLYPDQPNPLQVTAIVKYW 35


>d2sici_ d.84.1.1 (I:) Subtilisin inhibitor {Streptomyces
          albogriseolus, s-3253 [TaxId: 1887]}
          Length = 107

 Score = 25.2 bits (55), Expect = 4.0
 Identities = 9/26 (34%), Positives = 10/26 (38%)

Query: 48 QAMDGAWYRDYSLRCEPVDYSTTPKA 73
           A   A  R  +L C P    T P A
Sbjct: 15 SATTAAPERAVTLTCAPGPSGTHPAA 40


>d1gkma_ a.127.1.2 (A:) Histidine ammonia-lyase (HAL) {Pseudomonas
           putida [TaxId: 303]}
          Length = 509

 Score = 26.1 bits (57), Expect = 4.3
 Identities = 11/48 (22%), Positives = 17/48 (35%), Gaps = 1/48 (2%)

Query: 35  IIIINVASSMPKIQAMDGAWYRD-YSLRCEPVDYSTTPKAMRVARGCW 81
              +   SS   +   +    +D YSLRC+P         +R A    
Sbjct: 256 FRDLLGDSSEVSLSHKNADKVQDPYSLRCQPQVMGACLTQLRQAAEVL 303


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.327    0.140    0.472 

Gapped
Lambda     K      H
   0.267   0.0516    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 895,715
Number of extensions: 41548
Number of successful extensions: 120
Number of sequences better than 10.0: 1
Number of HSP's gapped: 120
Number of HSP's successfully gapped: 13
Length of query: 218
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 136
Effective length of database: 1,281,736
Effective search space: 174316096
Effective search space used: 174316096
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 51 (23.9 bits)