Query psy12655
Match_columns 299
No_of_seqs 138 out of 1111
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 16:09:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12655.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12655hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qtp_A Enolase 1; glycolysis, 100.0 1E-111 4E-116 826.6 32.5 297 1-299 6-306 (441)
2 3otr_A Enolase; structural gen 100.0 3E-111 9E-116 824.7 31.5 296 2-299 3-308 (452)
3 3qn3_A Enolase; structural gen 100.0 3.6E-85 1.2E-89 640.0 32.7 282 2-299 6-288 (417)
4 3tqp_A Enolase; energy metabol 100.0 6.8E-84 2.3E-88 632.8 34.1 283 2-299 4-290 (428)
5 3uj2_A Enolase 1; enzyme funct 100.0 8.9E-82 3E-86 620.9 32.7 286 1-299 26-316 (449)
6 2al1_A Enolase 1, 2-phospho-D- 100.0 3.7E-79 1.3E-83 600.8 32.4 297 2-299 1-300 (436)
7 2akz_A Gamma enolase, neural; 100.0 2.3E-78 7.8E-83 595.6 32.1 297 2-299 1-297 (439)
8 2ptz_A Enolase; lyase, glycoly 100.0 1.7E-69 5.6E-74 531.6 32.8 293 1-299 4-299 (432)
9 2fym_A Enolase; RNA degradosom 100.0 4.7E-64 1.6E-68 492.3 32.0 289 1-299 1-294 (431)
10 1w6t_A Enolase; bacterial infe 100.0 1.9E-62 6.6E-67 482.7 32.1 289 2-299 13-306 (444)
11 2pa6_A Enolase; glycolysis, ly 100.0 1.3E-56 4.4E-61 438.8 33.5 285 1-299 9-294 (427)
12 2qq6_A Mandelate racemase/muco 99.9 3.2E-26 1.1E-30 222.1 10.9 236 1-298 6-246 (410)
13 2ox4_A Putative mandelate race 99.9 2E-23 7E-28 201.6 15.8 232 1-299 3-246 (403)
14 2gl5_A Putative dehydratase pr 99.9 1.1E-21 3.9E-26 189.8 13.7 230 1-298 3-254 (410)
15 2o56_A Putative mandelate race 99.9 4.6E-21 1.6E-25 185.4 14.3 229 1-298 4-251 (407)
16 2poz_A Putative dehydratase; o 99.8 3.2E-20 1.1E-24 178.8 13.8 226 1-298 3-235 (392)
17 1kko_A 3-methylaspartate ammon 99.7 1.2E-17 4.1E-22 162.5 9.6 210 17-298 50-277 (413)
18 2p3z_A L-rhamnonate dehydratas 99.7 5.2E-17 1.8E-21 158.4 12.7 188 18-299 70-259 (415)
19 2pp0_A L-talarate/galactarate 99.7 2.2E-16 7.7E-21 152.5 16.4 210 1-298 26-256 (398)
20 3bjs_A Mandelate racemase/muco 99.7 6.9E-16 2.4E-20 150.7 18.6 207 1-298 39-265 (428)
21 2qgy_A Enolase from the enviro 99.7 1.7E-15 5.8E-20 146.0 20.5 212 1-298 11-230 (391)
22 3cyj_A Mandelate racemase/muco 99.7 1.6E-15 5.5E-20 145.1 19.3 206 1-299 6-226 (372)
23 2pge_A MENC; OSBS, NYSGXRC, PS 99.6 4.9E-16 1.7E-20 149.1 11.9 196 17-298 30-244 (377)
24 1wue_A Mandelate racemase/muco 99.6 1.4E-15 4.8E-20 146.3 14.6 122 1-149 20-154 (386)
25 1rvk_A Isomerase/lactonizing e 99.6 9.3E-15 3.2E-19 139.9 20.2 214 1-298 1-236 (382)
26 2ps2_A Putative mandelate race 99.6 8.9E-15 3E-19 139.7 20.0 207 1-298 4-226 (371)
27 2qde_A Mandelate racemase/muco 99.6 6.8E-15 2.3E-19 141.9 16.9 208 1-298 3-225 (397)
28 1wuf_A Hypothetical protein LI 99.6 2.8E-15 9.6E-20 144.6 13.8 203 1-298 20-237 (393)
29 3p3b_A Mandelate racemase/muco 99.6 9.8E-16 3.3E-20 147.8 9.8 205 1-298 12-237 (392)
30 2p8b_A Mandelate racemase/muco 99.6 1.8E-14 6.1E-19 137.3 18.4 206 1-298 1-222 (369)
31 1tzz_A Hypothetical protein L1 99.6 7.2E-14 2.5E-18 134.5 22.6 215 1-298 6-246 (392)
32 4hnl_A Mandelate racemase/muco 99.6 4.9E-14 1.7E-18 137.1 20.7 215 2-298 27-257 (421)
33 2zad_A Muconate cycloisomerase 99.6 5.5E-14 1.9E-18 132.9 20.5 202 1-298 2-220 (345)
34 1tkk_A Similar to chloromucona 99.6 1.1E-13 3.9E-18 131.7 22.4 205 1-298 1-223 (366)
35 2ovl_A Putative racemase; stru 99.6 1.4E-13 4.8E-18 131.4 21.8 209 1-298 2-227 (371)
36 2qdd_A Mandelate racemase/muco 99.6 5E-14 1.7E-18 134.9 17.8 206 1-298 3-224 (378)
37 1kcz_A Beta-methylaspartase; b 99.6 2.3E-14 7.9E-19 139.2 15.1 211 18-298 51-277 (413)
38 1nu5_A Chloromuconate cycloiso 99.6 4.2E-13 1.4E-17 127.9 23.4 208 1-298 1-224 (370)
39 2nql_A AGR_PAT_674P, isomerase 99.5 9.9E-14 3.4E-18 133.4 16.7 188 19-298 52-244 (388)
40 1sjd_A N-acylamino acid racema 99.5 6.1E-14 2.1E-18 133.6 15.1 120 1-148 1-133 (368)
41 2og9_A Mandelate racemase/muco 99.5 1E-13 3.5E-18 133.6 16.4 209 1-298 13-243 (393)
42 2zc8_A N-acylamino acid racema 99.5 8.4E-14 2.9E-18 132.7 15.3 202 1-298 1-217 (369)
43 2pgw_A Muconate cycloisomerase 99.5 1.6E-13 5.4E-18 131.7 17.0 203 1-298 4-226 (384)
44 2oz8_A MLL7089 protein; struct 99.5 3.1E-13 1.1E-17 130.0 19.0 207 1-298 3-228 (389)
45 1r0m_A N-acylamino acid racema 99.5 5.6E-14 1.9E-18 134.3 12.8 202 1-298 8-224 (375)
46 1mdl_A Mandelate racemase; iso 99.5 4.8E-13 1.6E-17 127.0 18.7 205 1-298 4-225 (359)
47 2gdq_A YITF; mandelate racemas 99.5 6E-13 2.1E-17 127.8 18.7 202 1-298 4-221 (382)
48 2rdx_A Mandelate racemase/muco 99.5 3E-12 1E-16 122.6 19.3 205 1-298 3-224 (379)
49 2hzg_A Mandelate racemase/muco 99.4 1.2E-13 4.1E-18 133.3 8.3 210 1-298 3-231 (401)
50 2hxt_A L-fuconate dehydratase; 99.4 5.7E-12 1.9E-16 123.2 17.2 212 1-298 2-278 (441)
51 4hpn_A Putative uncharacterize 99.0 1E-08 3.4E-13 97.9 18.5 209 1-298 1-224 (378)
52 3rcy_A Mandelate racemase/muco 99.0 6.7E-08 2.3E-12 94.5 21.4 223 1-298 2-239 (433)
53 3jva_A Dipeptide epimerase; en 99.0 2.7E-08 9.4E-13 94.4 17.7 200 1-298 1-219 (354)
54 2chr_A Chloromuconate cycloiso 98.9 6E-08 2E-12 92.2 19.8 210 1-298 1-224 (370)
55 4h2h_A Mandelate racemase/muco 98.9 1E-07 3.6E-12 91.1 20.3 204 1-298 10-231 (376)
56 3dg3_A Muconate cycloisomerase 98.9 1.3E-07 4.3E-12 90.2 20.7 110 1-135 1-123 (367)
57 4h83_A Mandelate racemase/muco 98.9 4.9E-08 1.7E-12 93.9 17.2 210 1-298 20-245 (388)
58 4dwd_A Mandelate racemase/muco 98.9 3.8E-07 1.3E-11 88.0 22.9 215 1-298 3-227 (393)
59 3i4k_A Muconate lactonizing en 98.9 2.7E-07 9.1E-12 88.6 21.0 209 1-298 6-230 (383)
60 3fcp_A L-Ala-D/L-Glu epimerase 98.9 2.9E-07 9.8E-12 88.3 21.1 208 1-298 5-229 (381)
61 4e4u_A Mandalate racemase/muco 98.8 2.4E-07 8.3E-12 89.9 20.3 224 1-298 1-237 (412)
62 4h1z_A Enolase Q92ZS5; dehydra 98.8 1.1E-07 3.8E-12 92.2 17.7 120 2-147 27-179 (412)
63 4e5t_A Mandelate racemase / mu 98.8 1.1E-07 3.8E-12 92.0 17.6 227 1-298 2-244 (404)
64 3dgb_A Muconate cycloisomerase 98.8 1.2E-06 3.9E-11 84.1 24.0 208 2-298 7-230 (382)
65 3sbf_A Mandelate racemase / mu 98.8 1.6E-07 5.6E-12 90.6 17.8 118 1-146 6-124 (401)
66 3stp_A Galactonate dehydratase 98.8 2E-07 6.9E-12 90.5 18.2 208 1-298 23-266 (412)
67 3t6c_A RSPA, putative MAND fam 98.8 1.1E-06 3.8E-11 86.0 23.5 118 1-146 27-146 (440)
68 3ik4_A Mandelate racemase/muco 98.8 1.5E-06 5.1E-11 82.9 23.6 205 1-298 5-225 (365)
69 3r0u_A Enzyme of enolase super 98.8 1.8E-06 6.1E-11 82.9 23.7 205 1-298 3-224 (379)
70 3v3w_A Starvation sensing prot 98.8 1.8E-06 6.3E-11 84.0 23.7 118 1-147 23-141 (424)
71 3tj4_A Mandelate racemase; eno 98.8 3.2E-07 1.1E-11 87.6 17.8 214 1-298 1-233 (372)
72 3r4e_A Mandelate racemase/muco 98.7 5.6E-07 1.9E-11 87.4 19.3 118 1-147 17-135 (418)
73 3gd6_A Muconate cycloisomerase 98.7 1.2E-06 4.1E-11 84.3 21.2 213 1-298 1-225 (391)
74 3tji_A Mandelate racemase/muco 98.7 6.2E-07 2.1E-11 87.3 19.4 118 1-146 27-145 (422)
75 3sjn_A Mandelate racemase/muco 98.7 9.1E-07 3.1E-11 84.6 20.0 208 1-298 3-230 (374)
76 3go2_A Putative L-alanine-DL-g 98.7 6.7E-07 2.3E-11 86.6 19.3 117 1-147 3-121 (409)
77 3fv9_G Mandelate racemase/muco 98.7 1.9E-06 6.5E-11 82.8 22.3 209 1-298 3-230 (386)
78 3toy_A Mandelate racemase/muco 98.7 9.9E-07 3.4E-11 84.7 20.3 207 1-298 27-249 (383)
79 3i6e_A Muconate cycloisomerase 98.7 9.8E-07 3.4E-11 84.7 20.2 204 1-298 8-228 (385)
80 3vcn_A Mannonate dehydratase; 98.7 1.2E-06 4.1E-11 85.3 21.0 118 1-147 24-142 (425)
81 3u9i_A Mandelate racemase/muco 98.7 4.5E-07 1.6E-11 87.4 17.5 213 1-298 27-255 (393)
82 3ro6_B Putative chloromuconate 98.7 4.4E-07 1.5E-11 86.2 17.0 205 1-298 1-220 (356)
83 3rr1_A GALD, putative D-galact 98.7 7.6E-07 2.6E-11 86.3 18.8 210 1-298 2-214 (405)
84 3ugv_A Enolase; enzyme functio 98.7 2E-06 6.9E-11 82.8 21.7 210 1-298 28-255 (390)
85 1jpd_X L-Ala-D/L-Glu epimerase 98.7 1.2E-06 4.2E-11 81.9 19.7 151 61-298 57-209 (324)
86 3eez_A Putative mandelate race 98.7 1E-06 3.6E-11 84.3 19.3 203 1-298 3-224 (378)
87 3s5s_A Mandelate racemase/muco 98.7 2.1E-06 7.1E-11 82.7 20.4 110 1-135 5-128 (389)
88 3q45_A Mandelate racemase/muco 98.7 1.5E-06 5.2E-11 82.8 19.3 204 1-298 1-220 (368)
89 3mwc_A Mandelate racemase/muco 98.7 1.9E-06 6.6E-11 83.2 20.1 111 1-135 7-131 (400)
90 3qld_A Mandelate racemase/muco 98.6 1.4E-06 4.9E-11 83.8 18.7 112 1-135 1-132 (388)
91 4dye_A Isomerase; enolase fami 98.6 3.4E-06 1.2E-10 81.5 20.8 210 1-298 24-248 (398)
92 3tcs_A Racemase, putative; PSI 98.6 1.9E-06 6.4E-11 83.1 18.5 104 1-141 23-131 (388)
93 4e4f_A Mannonate dehydratase; 98.6 2.2E-06 7.5E-11 83.5 19.2 115 1-147 23-141 (426)
94 1chr_A Chloromuconate cycloiso 98.6 1.2E-06 4.1E-11 83.5 16.9 209 1-298 1-224 (370)
95 3mqt_A Mandelate racemase/muco 98.6 1.1E-05 3.6E-10 77.7 23.3 218 1-298 5-237 (394)
96 3dip_A Enolase; structural gen 98.5 3.7E-06 1.3E-10 81.4 18.6 115 1-147 4-121 (410)
97 4e8g_A Enolase, mandelate race 98.5 6.6E-06 2.3E-10 79.2 20.0 205 1-298 23-245 (391)
98 3ddm_A Putative mandelate race 98.5 6.4E-06 2.2E-10 79.3 19.9 204 1-298 10-235 (392)
99 3vdg_A Probable glucarate dehy 98.5 6.1E-06 2.1E-10 81.0 19.7 117 1-147 28-169 (445)
100 3mkc_A Racemase; metabolic pro 98.5 5.4E-06 1.8E-10 79.8 18.9 218 1-298 10-242 (394)
101 3vc5_A Mandelate racemase/muco 98.5 1E-05 3.4E-10 79.3 21.0 117 1-147 23-164 (441)
102 3my9_A Muconate cycloisomerase 98.5 3.1E-06 1.1E-10 80.9 16.9 205 1-298 6-227 (377)
103 3v5c_A Mandelate racemase/muco 98.5 9.6E-06 3.3E-10 78.1 20.3 207 1-298 12-237 (392)
104 3va8_A Probable dehydratase; e 98.4 1.1E-05 3.9E-10 79.0 19.3 116 1-147 27-167 (445)
105 4dxk_A Mandelate racemase / mu 98.4 1.2E-05 4E-10 77.6 18.9 117 1-147 1-117 (400)
106 3ozy_A Putative mandelate race 98.4 9E-06 3.1E-10 78.1 17.7 208 1-298 3-231 (389)
107 4a35_A Mitochondrial enolase s 98.4 3.1E-05 1.1E-09 75.8 20.4 112 1-135 5-140 (441)
108 3fxg_A Rhamnonate dehydratase; 98.3 2.1E-05 7.3E-10 77.4 17.5 99 18-147 65-166 (455)
109 3p0w_A Mandelate racemase/muco 98.3 2.1E-05 7.3E-10 77.6 16.7 106 1-135 8-153 (470)
110 3ekg_A Mandelate racemase/muco 98.3 2.2E-05 7.5E-10 76.1 16.3 98 18-146 59-159 (404)
111 3mzn_A Glucarate dehydratase; 98.2 8.5E-05 2.9E-09 72.9 19.8 107 1-135 5-134 (450)
112 3pfr_A Mandelate racemase/muco 98.2 5.1E-05 1.7E-09 74.5 17.1 107 1-135 9-138 (455)
113 4g8t_A Glucarate dehydratase; 98.1 7.1E-05 2.4E-09 73.6 15.7 101 22-151 59-169 (464)
114 3ijl_A Muconate cycloisomerase 97.6 0.00085 2.9E-08 63.1 14.2 96 18-146 27-124 (338)
115 2okt_A OSB synthetase, O-succi 97.6 0.0021 7.3E-08 60.2 15.9 104 1-128 2-118 (342)
116 4gfi_A Mandelate racemase/muco 96.6 0.051 1.7E-06 50.4 15.3 69 59-146 55-123 (329)
117 1r6w_A OSB synthase, O-succiny 96.4 0.033 1.1E-06 51.6 12.3 92 2-131 2-106 (322)
118 3caw_A O-succinylbenzoate synt 91.5 0.91 3.1E-05 41.9 9.8 27 106-132 68-94 (330)
119 2ozt_A TLR1174 protein; struct 85.4 1.9 6.5E-05 39.9 7.3 55 219-298 143-200 (332)
120 2opj_A O-succinylbenzoate-COA 57.8 19 0.00066 33.0 6.5 26 272-298 135-160 (327)
121 2l69_A Rossmann 2X3 fold prote 38.9 45 0.0015 25.9 4.8 43 217-289 8-50 (134)
122 3clq_A Uncharacterized protein 37.9 55 0.0019 31.5 6.2 65 50-127 185-249 (421)
123 2lmc_A Bacterial RNA polymeras 36.6 32 0.0011 25.6 3.4 40 149-189 20-67 (84)
124 2l9f_A CALE8, meacp; transfera 30.4 1.9E+02 0.0064 22.3 9.3 81 185-289 12-93 (102)
125 1vk8_A Hypothetical protein TM 25.6 1.1E+02 0.0037 23.7 5.1 60 165-235 17-77 (106)
126 2bf9_A Pancreatic hormone; tur 24.7 86 0.0029 19.8 3.4 19 268-286 8-26 (36)
127 2bn5_A PSI; nuclear protein, s 21.8 49 0.0017 20.5 1.9 11 274-284 5-15 (33)
128 2dsy_A Hypothetical protein TT 21.6 69 0.0023 23.6 3.1 28 207-234 23-60 (87)
129 4hjh_A Phosphomannomutase; str 21.4 1.9E+02 0.0066 27.6 7.1 85 193-291 195-281 (481)
130 1dos_A Aldolase class II; lyas 20.5 2.2E+02 0.0076 26.6 7.1 126 117-258 91-230 (358)
No 1
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=100.00 E-value=1.2e-111 Score=826.60 Aligned_cols=297 Identities=61% Similarity=0.952 Sum_probs=287.8
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
|.|++|+|||||||||||||||||+|++|.+||+||||||||.|||+||||+|++||+||||++||+|||++|+|+|+
T Consensus 6 m~I~~i~ar~ildsrGnptvev~v~~~~g~~ra~vPsgaStG~~Ea~elrd~d~~~y~Gkgv~kAv~~vn~~iap~Li-- 83 (441)
T 3qtp_A 6 MSIQKVHAREILDSRGNPTIEVEITTGKGMFRSCVPSGASTGVHEAVELRDGDKKRYGGKGVLKAVENVNTIIGPALL-- 83 (441)
T ss_dssp TBCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCCCCSCCSSSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHT--
T ss_pred cEEEEEEEEEEECCCCCEEEEEEEEECCCcEEEecccCCCCCcceeEeecCCCcccccCccHHHHHHHHHHHHHHHHh--
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAG 160 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~ 160 (299)
|++++||++||++|++||||+|||+||+|||||||||+|||+|+.+++|||+||+++.|...++||+|||||||||+||+
T Consensus 84 g~~~~dQ~~iD~~m~~lDgT~nks~lGaNail~vSlAvakAaA~~~~~PLy~~l~~l~g~~~~~lPvP~~nvinGG~ha~ 163 (441)
T 3qtp_A 84 GKNVLNQAELDEMMIKLDGTNNKGKLGANAILGCSMSICRAAAAEKGLPLYKYLAELTGHKEMTMPVPCFNVINGGAHAG 163 (441)
T ss_dssp TCBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTCCCCCBCEEEEEEEECGGGCS
T ss_pred cCChhhHHHHHHHHHhccCCCCccCCCccchhhHHHHHHHHHHHhcCCcHHHHHHhhcCCCCceeccceEeeecCCccCC
Confidence 89999999999999999999999999999999999999999999999999999999888888999999999999999999
Q ss_pred CcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccce
Q psy12655 161 NKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240 (299)
Q Consensus 161 ~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i 240 (299)
|+|+||||||+|+|+.||+|+|||++||||+||++|++|||...|+|||||||+|++++++|||++|++||+++||+++|
T Consensus 164 n~l~~QEfmi~P~ga~sf~ealr~~~evyh~Lk~~l~~k~g~~~t~vgdEGgfap~~~~~~eaL~ll~~Ai~~aGy~~~i 243 (441)
T 3qtp_A 164 NALAMQEFMICPTGATNFHEALRMAAETYQCLKVVIKAKYGQDATNVGDEGGFAPNVSGAREALDLLVEAIAKAGYTGKI 243 (441)
T ss_dssp SSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCCCSSHHHHHHHHHHHHHHHTCTTTC
T ss_pred CccccceeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCcccCCCCCCHHHHHHHHHHHHHHcCCCceE
Confidence 99999999999999999999999999999999999999999778999999999999999999999999999999999999
Q ss_pred EEEeeccccccccC--CceeeecCCC--CCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 241 EIGMDVAASEFFKE--GQYDLDFKNP--NSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 241 ~ialD~AAse~~~~--g~Y~~~fk~~--~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
.|||||||||||++ |+|+|.||+| ++++++++|++||+|||++|+++|||++|||||++
T Consensus 244 ~i~lD~Aasefy~~~~g~Y~l~f~~~~~~~~~~~~~t~~elid~y~~lle~ypI~~IEDPl~~ 306 (441)
T 3qtp_A 244 EIAMDCAASEFYNEETKKYDLGKKIPADKKDPSLVKDVDGLIAEYVDYGKHYPIASIEDPFAE 306 (441)
T ss_dssp EEEEECCGGGGEETTTTEEETTTTSCGGGCCGGGEECHHHHHHHHHHHHHHSCEEEEESCSCT
T ss_pred EEccchhHHHhhhccCCeEEeecCCcccccccccccCHHHHHHHHHHHhhhcceeeecCCCCh
Confidence 99999999999975 8999999876 34455789999999999999999999999999986
No 2
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=100.00 E-value=2.6e-111 Score=824.71 Aligned_cols=296 Identities=60% Similarity=0.985 Sum_probs=287.9
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKES 81 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g 81 (299)
.|++|+|||||||||||||||||+|++|.+||+||||||||.|||+||||+|++||+||||++||++||+.|+|+|+ |
T Consensus 3 ~I~~i~areildSrGnpTvEv~v~~~~G~~ra~vPsGaStG~~Ea~elrD~d~~~y~Gkgv~kAv~~vn~~Iap~Li--g 80 (452)
T 3otr_A 3 VIKDIVAREILDSRGNPTIEVDVSTEGGVFRAAVPSGASTGIYEALELRDKDPKRYLGKGVLNAVEIVRQEIKPALL--G 80 (452)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCCCBSSCSSSCBCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHT--T
T ss_pred cceEEEEEEEEcCCCCEEEEEEEEECCccEEEeccccCCCCcceEEeecCCCcccccCccHHHHHHHHHHHHHHHHc--C
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999 7
Q ss_pred CCccchHHHHHHHH-hhcCCCC-----cccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCC--ccccccceEEee
Q psy12655 82 FEVTQQKEIDEFMI-KLDGTEN-----KSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNS--NIILPVPAFNVI 153 (299)
Q Consensus 82 ~~~~dQ~~ID~~L~-~lDgT~n-----ks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~--~~~lP~P~~nvi 153 (299)
+|++||++||++|+ +||||+| ||+||+|||||||||+|||+|..+++|||+||+++.|.. .+.||+||||||
T Consensus 81 ~d~~dQ~~iD~~m~~~lDgT~n~~~~~ks~lGaNail~vSlAvakAaA~~~~~PLy~yi~~l~g~~~~~~~lPvP~~nvi 160 (452)
T 3otr_A 81 KDPCDQKGIDMLMVEQLDGTKNEWGYSKSKLGANAILGVSIACCRAGAASKGLPLYKYIATLAGKTIDKMVMPVPFFNVI 160 (452)
T ss_dssp CCTTCHHHHHHHHHHTTTCCEETTEECCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSSSEEECEECEEEE
T ss_pred CChHhHHHHHHHHHHHhcCCCCcccccccccCcchhhHHHHHHHHHHHHhcCCcHHHHHHHhcCCCCcceecccceEEEe
Confidence 99999999999999 9999999 999999999999999999999999999999999998876 789999999999
Q ss_pred cCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHH
Q psy12655 154 NGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEK 233 (299)
Q Consensus 154 nGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ 233 (299)
|||+||+|+|+||||||+|+|+.||+|+|||++||||+||++|++|||...|+|||||||+|++++++|||++|++||++
T Consensus 161 nGG~ha~n~l~~QEfmi~P~ga~sf~ealr~g~evyh~Lk~vl~~k~g~~~t~vgDEGgfap~~~~~~eaL~ll~~Ai~~ 240 (452)
T 3otr_A 161 NGGEHAGNGLALQEFLIAPVGAPNIREAIRYGSETYHHLKNVIKNKYGLDATNVGDEGGFAPNVATAEEALNLLVEAIKA 240 (452)
T ss_dssp ECGGGCSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCCCCSHHHHHHHHHHHHHH
T ss_pred cCcccCCCCCCcCeEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977899999999999999999999999999999
Q ss_pred cccccceEEEeeccccccc--cCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 234 AGYTGKVEIGMDVAASEFF--KEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 234 ag~~~~i~ialD~AAse~~--~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
+||+++|.||||||||||| ++|+|+|.||+|++++++.+|++||+|||.+|+++|||++|||||+|
T Consensus 241 aGy~~~i~i~lD~Aasefy~~~~g~Y~l~fk~~~~~~~~~~t~~Elid~y~~lle~ypIv~IEDPl~~ 308 (452)
T 3otr_A 241 AGYEGKIKIAFDAAASEFYKQDEKKYDLDYKCKTKNASKHLTGEKLKEVYEGWLKKYPIISVEDPFDQ 308 (452)
T ss_dssp HTCTTTSEEEEECCGGGGEETTTTEEETTTTCSSCCGGGEECHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred cCCCceEEEccccchHhheeccCCeEEeeccCCCCcccccccHHHHHHHHHHHHhhhCceEEecCCCh
Confidence 9999999999999999999 67999999998866666789999999999999999999999999986
No 3
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=100.00 E-value=3.6e-85 Score=640.01 Aligned_cols=282 Identities=49% Similarity=0.800 Sum_probs=272.8
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
.|++|+||+||||||||||||+|+|++|.+ ||+||||||||.|||+||||+| ++|+||||.+|+++||+.|+|.|+
T Consensus 6 ~i~~i~~r~i~dsrG~ptvev~v~t~~g~~g~a~vpsgastg~~ea~elrd~~-~~y~gkgv~~av~~v~~~iap~Li-- 82 (417)
T 3qn3_A 6 VIEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTGSKEALELRDND-ERFGGKGVLKAVANVNETIADEIL-- 82 (417)
T ss_dssp BEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCCBSSCSSSCBCCCCCS-TGGGGTCCHHHHHHHHTHHHHHHT--
T ss_pred eeeEEEEEEEEcCCCCceEEEEEEECCCCEEEEecCCCCccccceeeeecCCC-ccccCccHHHHHHHHHHHHHHHHC--
Confidence 599999999999999999999999999988 9999999999999999999999 799999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAG 160 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~ 160 (299)
|+|+.+|.+||+.|.++|||+||+++|+|||+|||||+|+|+|+.+|+|||+||+ |....++|+||+|++|||.|++
T Consensus 83 G~d~~~~~~id~~m~~~dgt~~k~~lg~nAi~aVs~Al~da~ak~~g~PLy~lLG---G~~~~~lPv~~~nvinGG~ha~ 159 (417)
T 3qn3_A 83 GLDAFNQTQLDDTLRELDGTNNYSNLGANATLGVSMATARAAAAALGMPLYRYLG---GANASILPVPMCNIINGGAHAN 159 (417)
T ss_dssp TSBTTCHHHHHHHHHHHHCSSSCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHH---GGGCCEECEEEEEEEECGGGSS
T ss_pred CCCccCHHHHHHHHHHhhccCCCCchhhhhHHHHHHHHHHHHHHHhCCcHHHHhC---CCCCcceeeeeeeeecCcccCC
Confidence 7999999999999999999999999999999999999999999999999999999 7666789999999999999999
Q ss_pred CcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccce
Q psy12655 161 NKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240 (299)
Q Consensus 161 ~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i 240 (299)
|++++|||||+|.++.+|+|++++++|+||+||.+++++ |. .|+|||||||+|++++++++|++|.+||+++||+++|
T Consensus 160 ~~~~~qe~mi~P~ga~~~~ea~~~G~evy~~lK~~l~~k-g~-~t~vGdegg~ap~~~~~~e~l~~i~~Air~aGy~~dv 237 (417)
T 3qn3_A 160 NNVDFQEFMIMPFGFTSFKEALRSVCEIYAILKKELANS-GH-STALGDEGGFAPNLANNTEPIDLLMTCIKKAGYENRV 237 (417)
T ss_dssp SSCCCSEEEEEECSCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSSSHHHHHHHHHHHHTTCTTTE
T ss_pred CcccHHHHhcCccchHHHHHHHHHhHHHHHHHHHHHHhc-Cc-ccccCCCCCcCCCcCCHHHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999999999999999999976 75 8999999999999999999999999999999999899
Q ss_pred EEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 241 ~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
.|++|+++||||++|+|+++ ++.+|++|++++|.+|+++|||++|||||++
T Consensus 238 ~l~vD~~ase~~~~g~y~l~--------~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~ 288 (417)
T 3qn3_A 238 KIALDVASTEFFKDGKYHME--------GKAFSSEALIERYVELCAKYPICSIEDGLAE 288 (417)
T ss_dssp EEEEECCGGGGEETTEEEET--------TEEECHHHHHHHHHHHHHHSCEEEEESSSCT
T ss_pred eEEEECCchhhccCCeeecC--------CCccCHHHHHHHHHHHHhhcceeEEecCCCc
Confidence 99999999999999999982 3578999999999999999999999999985
No 4
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=100.00 E-value=6.8e-84 Score=632.85 Aligned_cols=283 Identities=51% Similarity=0.823 Sum_probs=266.0
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
.|++|+||+||||||||||||+|+|++|.+ ||+||||+|||.|||+||||+|++||+||||.+|+++||+.|+|+|+
T Consensus 4 ~i~~~~~r~i~dsrg~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~gkgv~~av~~v~~~iap~Li-- 81 (428)
T 3tqp_A 4 TITDINAHEILDSRANPTLEVRVTLSSQAYGCAAVPSGASTGEREAVELRDNDLERYGGKGVLQAVENVNGPIRDALL-- 81 (428)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCBCC---CCSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHT--
T ss_pred eEEEEEEEEEEcCCCCCEEEEEEEECCCCEEEEeccccccCCcceeEeecCCCccccccccHHHHHHHHHHHHHHHhc--
Confidence 599999999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhC-CCccccccceEEeecCCcCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAG-NSNIILPVPAFNVINGGSHA 159 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g-~~~~~lP~P~~nvinGG~ha 159 (299)
|+|+.+|++||+.|.++|||+||+++|+|||+|||||+|+|+|+.+|+|||+||+ | ....++|+|++|++|||.|+
T Consensus 82 G~d~~~~~~i~~~m~~~dgt~~k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLG---G~~~~~~~pvp~~~~inGG~ha 158 (428)
T 3tqp_A 82 GQDPRSQEEIDRIMIELDGTENKANLGANAILGVSLAVAYAAANNADLPLYRYLG---GDGGPFSMPVPMMNIINGGAHA 158 (428)
T ss_dssp TCCTTCHHHHHHHHHHHHCCTTCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHH---TTTCCCCBCEEEEEEEECC---
T ss_pred CCCccCHHHHHHHHHHhcCcCCcCccchhHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCceeeeEEEEEecCcccC
Confidence 7999999999999999999999999999999999999999999999999999999 8 65678999999999999999
Q ss_pred CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccc--
Q psy12655 160 GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT-- 237 (299)
Q Consensus 160 ~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~-- 237 (299)
+|++++|||||+|.++.+|+|++++..++||+||..|+++ |. .|+|||||||+|++++++++|++|.+||+++||+
T Consensus 159 ~~~~~~qefmi~P~ga~~~~ea~~~~~egy~~lK~~l~~~-g~-~t~vGdegg~ap~~~~~~e~l~~i~~Air~agy~~G 236 (428)
T 3tqp_A 159 TNNLDFQEFMIVPVGAPTFAEALRYGAEVFHALKKRLVSR-GL-MSAVGDEGGFAPDLPNNEAAFELILEAIEDANYVPG 236 (428)
T ss_dssp -CCCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCBT
T ss_pred CCccchhHHhhcCcchhhHHHHHHHHHHHHHhHhhhhccc-cc-ccccCCCCCcCCCcccHHHHHHHHHHHHHHhhcccC
Confidence 9999999999999999999999999999999999999966 75 8999999999999999999999999999999998
Q ss_pred cceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 238 GKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 238 ~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
++|.|++|+||||||++|+|+++ ++.+|++|++++|.+|+++|||++|||||++
T Consensus 237 ~dv~l~vD~aase~~~~g~Y~l~--------~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~ 290 (428)
T 3tqp_A 237 KDIYLALDAASSELYQNGRYDFE--------NNQLTSEEMIDRLTEWTKKYPVISIEDGLSE 290 (428)
T ss_dssp TTBEEEEECCGGGSEETTEECCS--------SSCBCHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred CceEEEEecchhhhccCCceecc--------ccccCHHHHHHHHHHHHhhcccceEeCCCCc
Confidence 58999999999999999999982 3568999999999999999999999999975
No 5
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=100.00 E-value=8.9e-82 Score=620.94 Aligned_cols=286 Identities=49% Similarity=0.781 Sum_probs=271.0
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|++|+||||||||||||+|+|++|.+ ||+||||+|||.|||+||||+|+.||+||||.+||++||+.|+|.|+
T Consensus 26 m~I~~i~~r~i~dsrg~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~g~~v~~av~~v~~~iap~Li- 104 (449)
T 3uj2_A 26 LEIEKVIGREIIDSRGNPTVEAEVYLAGGVTGRGTAPSGASTGEFEALELRDGDKGRFGGKGVTKAVQNINTEISEILS- 104 (449)
T ss_dssp TBEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCBC---CCSSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHT-
T ss_pred eEEEEEEEEEEECCCCCCeEEEEEEECCCCEEEEeccCCCcCcceeEEEeccCCcccccchhHHHHHHHHHHHHHHHHc-
Confidence 7899999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHA 159 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha 159 (299)
|+|+.+|.+||+.|.++|||+||+++|+|||+|||||+|+|+|+.+|+|||+||+ |....+||+||+|++|||.|+
T Consensus 105 -G~d~~~~e~i~~~m~~~dgt~~k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLG---G~~~~~lpvp~~n~inGG~ha 180 (449)
T 3uj2_A 105 -GMDASDIYAVDRAMIDADGTKDKSKFGANAVLAVSIACAKAAAAALGVPLYRFLG---GLNANRLPVPMMNILNGGAHA 180 (449)
T ss_dssp -TSBTTCHHHHHHHHHHHHCSSSCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---GGGCCBCCEECEEEEECSTTS
T ss_pred -cCCccCHHHHHHHHHHhcCcCCcchhhHHHHHHHHHHHHHHHHHHhCCCHHHHhC---CCCCCceeeeeEEEecCcccC
Confidence 7999999999999999999999999999999999999999999999999999999 766678999999999999999
Q ss_pred CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccc--
Q psy12655 160 GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT-- 237 (299)
Q Consensus 160 ~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~-- 237 (299)
+|++++|||||+|.++.+|+|++++..++||+||.+|+++ |. .|+|||||||+|++++++++|++|++||+++||+
T Consensus 181 ~~~~~~qEfmi~P~ga~~~~ea~~~~~egy~~lK~~lk~~-g~-~t~vGdeggfap~~~~~~e~l~~i~~AIr~agy~~G 258 (449)
T 3uj2_A 181 ANTVDVQEFMIMPVGAESFREALRQCTEVFHALAGLLKSK-GL-ATSVGDEGGFAPDLASDEEAIEYILEAVKLAGYEPG 258 (449)
T ss_dssp SSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSCHHHHHHHHHHHHHHTTCCBT
T ss_pred CCccchhhhhhCCcccccHHHHHHHHHHHHHHHHHHHhhc-CC-ccccCCCCCcCCCccCHHHHHHHHHHHHHHhccccC
Confidence 9999999999999999999999999999999999999866 74 8999999999999999999999999999999998
Q ss_pred cceEEEeecccccccc--CCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 238 GKVEIGMDVAASEFFK--EGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 238 ~~i~ialD~AAse~~~--~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
++|.|++||+|||||+ +|+|+++ +.++.+|++|++++|.+|+++|||++|||||++
T Consensus 259 ~dv~l~vD~aase~~~~~~g~Y~l~------~~~~~~t~~eai~~~~~lle~y~i~~IEdPl~~ 316 (449)
T 3uj2_A 259 RDFVLAMDAASSEWKGEKKGEYILP------KCKRKFASEELVAHWKSLCERYPIVSIEDGLDE 316 (449)
T ss_dssp TTBEEEEECCGGGCBCSSTTEEECT------TTCCEEEHHHHHHHHHHHHHHSCEEEEESCSCT
T ss_pred CceEEEEEcchhhhccccCceeecc------CcccccCHHHHHHHHHHHHHhcCceEEECCCCc
Confidence 5899999999999997 5899983 334678999999999999999999999999974
No 6
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=100.00 E-value=3.7e-79 Score=600.78 Aligned_cols=297 Identities=62% Similarity=1.005 Sum_probs=281.4
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
.|++|++|+||||||||||+|+|+|++| + +|.+|||+|||.+||+||||+|+.+|.||||.+|+++||+.|+|.|+++
T Consensus 1 ~I~~v~~r~i~dsrg~~tv~V~V~t~~G-~G~g~~psgastG~~ea~elrd~~~~~~~g~~v~~av~~v~~~iap~Li~~ 79 (436)
T 2al1_A 1 AVSKVYARSVYDSRGNPTVEVELTTEKG-VFRSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKA 79 (436)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHH
T ss_pred CeeEEEEEEEEcCCCCcEEEEEEEECCc-eEEEeecccccCCcceeeeeccCccccccCccHHHHHHHHHHHHHHHHHHC
Confidence 4899999999999999999999999999 6 9999999999999999999999999999999999999999999999955
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCC--ccccccceEEeecCCcC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNS--NIILPVPAFNVINGGSH 158 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~--~~~lP~P~~nvinGG~h 158 (299)
|+|+.+|++||+.|.++|||+||+++|+||++|||||+|+|+|+.+|+|||+||++|.|.. ..++|+||+|++|||.|
T Consensus 80 G~d~~~~~~i~~~m~~~dgt~~~~~lg~~Ai~aVd~Al~Da~ak~~g~PLy~lLG~l~G~~~~~~~lpvp~~n~inGg~h 159 (436)
T 2al1_A 80 NIDVKDQKAVDDFLISLDGTANKSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKSKTSPYVLPVPFLNVLNGGSH 159 (436)
T ss_dssp TCCTTCHHHHHHHHHHHHCSTTSTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHTCCCTTEEECEEEEEEEECGGG
T ss_pred CCChhhHHHHHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCCcCceeeEEEEEeecCccc
Confidence 6899999999999999999999999999999999999999999999999999999888865 56899999999999999
Q ss_pred CCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHccccc
Q psy12655 159 AGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTG 238 (299)
Q Consensus 159 a~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~ 238 (299)
++|+++||||||+|.++.+|+|+++++.++||+||.+|+.|+|...|+|||||||+|++++++++|+++++|++++||++
T Consensus 160 a~~~~~~qefmi~p~~a~~~~ea~~~~~e~~~~lK~~l~~k~G~~a~~vGdegg~~p~~~~~~~~l~~i~~ai~~~G~~g 239 (436)
T 2al1_A 160 AGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDG 239 (436)
T ss_dssp SSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGSBCTTSCBCCCCSCHHHHHHHHHHHHHHHTCTT
T ss_pred cCCccccccceecCcccccHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCccCHHHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999999999999999988886558999999999999999999999999999999976
Q ss_pred ceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 239 KVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 239 ~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
+|.|++|+|+||||++|+|++.|++++++.++.+|++|++++|.+|+++|||++|||||+|
T Consensus 240 ~v~l~vD~aase~~~n~~y~~~~~~~~~~~~~~~t~~eai~~~~~~l~~y~i~~iEdPl~~ 300 (436)
T 2al1_A 240 KVKIGLDCASSEFFKDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAE 300 (436)
T ss_dssp TCEEEEECCGGGGEETTEECTTTTCTTCCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred ceEEEEechhhhhccCCceEEecccccccccccCCHHHHHHHHHHHHHhCCcEEEECCCCC
Confidence 6999999999999999999987776544445678999999999999999999999999975
No 7
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=100.00 E-value=2.3e-78 Score=595.57 Aligned_cols=297 Identities=70% Similarity=1.121 Sum_probs=281.5
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKES 81 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g 81 (299)
.|++|++|+||||||||||+|+|+|++|..||++|||+|||.+||+|+||+++.+|.|+||.+|+++||+.|+|+|+++|
T Consensus 1 ~I~~v~~r~i~dsrg~~tv~V~V~t~~G~G~~~~psgastG~~Ea~el~d~~~~~~~g~~v~~av~~v~~~iap~Li~~G 80 (439)
T 2akz_A 1 SIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINSTIAPALISSG 80 (439)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHHC
T ss_pred CeeEEEEEEEEcCCCCceEEEEEEECCCceEeeccCCCceeEEEEeeccCCCccccCCCcHHHHHHHHHHHHHHHHHhCC
Confidence 48999999999999999999999999998899999999999999999999998899999999999999999999999556
Q ss_pred CCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCC
Q psy12655 82 FEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGN 161 (299)
Q Consensus 82 ~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~ 161 (299)
+|+.+|++||+.|.++|||+||+++|+||++|||||+++|+|+.+|+|||+||++++|....++|+||+|++|||.|++|
T Consensus 81 ~d~~~~~~i~~~m~~~dgt~~~~~lg~nAi~aVs~Al~Da~ak~~g~PLy~lLG~~~G~~~~~lpvp~~~~inGg~ha~~ 160 (439)
T 2akz_A 81 LSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCKAGAAERELPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGN 160 (439)
T ss_dssp CCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSCCBCEEEEEEEECGGGSSS
T ss_pred CChhhHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCCceeEEEEEEEecCcccccc
Confidence 89999999999999999999999999999999999999999999999999999988886666899999999999999999
Q ss_pred cccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccceE
Q psy12655 162 KLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVE 241 (299)
Q Consensus 162 ~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i~ 241 (299)
+++||||||+|.++.+|+|+++++.++||+||.+|+.|+|...|+|||||||+|++++++++|++|++|++++||+++|.
T Consensus 161 ~~~~qefmi~p~~a~~~~ea~~~~~e~~~~lK~~lk~k~G~~~~~vGdegg~~p~~~~~~e~l~~i~~ai~~~G~~g~v~ 240 (439)
T 2akz_A 161 KLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIV 240 (439)
T ss_dssp SCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCSCCCHHHHHHHHHHHHHHHTCTTTCE
T ss_pred ccccccceecCCCccCHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCcccHHHHHHHHHHHHHHcCCccceE
Confidence 99999999999999999999999999999999999988887558999999999999999999999999999999986699
Q ss_pred EEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 242 IGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 242 ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
|++|+|++|||++|+|++.+++| .+.++.+|++|++++|.+|+++|||++|||||++
T Consensus 241 l~vD~a~se~~~~g~y~l~~~~~-~~~~~~~t~~e~~~~~~~ll~~y~i~~IEdPl~~ 297 (439)
T 2akz_A 241 IGMDVAASEFYRDGKYDLDFKSP-TDPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQ 297 (439)
T ss_dssp EEEECCGGGGEETTEECTTTTSS-CCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred EEEechHhhhccCCeeEEecccc-ccccccCCHHHHHHHHHHHHHhCCCcEEECCCCc
Confidence 99999999999999999876655 3345678999999999999999999999999975
No 8
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=100.00 E-value=1.7e-69 Score=531.58 Aligned_cols=293 Identities=59% Similarity=0.944 Sum_probs=275.5
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|++|+|+||||+|||+|+|+|++| . +|.+|||+|||.+||+|+||+++.+|.|+||.+|+++||+.|+|.|+
T Consensus 4 m~I~~i~~~~v~~~~~~p~v~V~v~td~G-~G~ge~~sgastg~~ea~elrd~~~~~~~g~~v~~av~~v~~~iap~Li- 81 (432)
T 2ptz_A 4 MTIQKVHGREVLDSRGNPTVEVEVTTEKG-VFRSAVPSGASTGVYEACELRDGDKKRYVGKGCLQAVKNVNEVIGPALI- 81 (432)
T ss_dssp TSCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTTGGGTCCHHHHHHHHHTHHHHHT-
T ss_pred CEEEEEEEEEEecCCCCcEEEEEEEeCCc-EEEEEEecccccCcceeeeeccCcccccccccHHHHHHHHHHHHHHHHC-
Confidence 78999999999999999999999999999 7 99999999999999999999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHA 159 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha 159 (299)
|+|+.+|++||+.|.++|+|+||+++|+||++|||||+++++|+..|+|||+||+++.|....++|+|++|++|||.|+
T Consensus 82 -G~d~~~~~~i~~~m~~~~~~~~~~~~~~~Ai~aVd~AlwD~~ak~~g~Ply~lLG~~~G~~~~~~pvp~~~~i~gg~~a 160 (432)
T 2ptz_A 82 -GRDELKQEELDTLMLRLDGTPNKGKLGANAILGCSMAISKAAAAAKGVPLYRYLASLAGTKELRLPVPCFNVINGGKHA 160 (432)
T ss_dssp -TCCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHTCSCCEECEEEEEEEECSTTS
T ss_pred -CCChhhHHHHHHHHHHhhCCCCcchHHHHHHHHHHHHHHHHHHHHhCCcHHHHhccccCCCCcCCceeEEEEecCcccc
Confidence 8999999999999999999999999999999999999999999999999999999888765557999999999999999
Q ss_pred CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccc
Q psy12655 160 GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGK 239 (299)
Q Consensus 160 ~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~ 239 (299)
+|++++|||||+|.++.+++|++++..+.|++||..|++|+|...|++||||||+|++++++++++++.+||+++|++++
T Consensus 161 ~~~~~~qe~mi~p~~~~~~~ea~~~~~eg~~~lK~~l~~k~G~~at~vgdegg~~p~~~~~~~~l~~i~~Air~~G~~g~ 240 (432)
T 2ptz_A 161 GNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKKYGQDAVNVGDEGGFAPPIKDINEPLPILMEAIEEAGHRGK 240 (432)
T ss_dssp SSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGCCBCTTSSBCCSCCCTTTHHHHHHHHHHHTTCTTS
T ss_pred cCCCCHHHhcccCcccCCHHHHHHHHHHHHHHHHHHhHhhcCCCccccCCccCcCCCcccHHHHHHHHHHHHHHhCCcCC
Confidence 99999999999999999999999999999999999998787864589999999999999999999999999999999767
Q ss_pred eEEEeeccccccccC--CceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 240 VEIGMDVAASEFFKE--GQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 240 i~ialD~AAse~~~~--g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
+.|++|+++++||++ |+|++.++.+ .++.+|++||++||.+++++|||++|||||++
T Consensus 241 v~l~vDan~~~~~~~~~~~y~~~~~~~---~~~~~~a~~~~~~~~~~l~~y~i~~iEdPl~~ 299 (432)
T 2ptz_A 241 FAICMDCAASETYDEKKQQYNLTFKSP---EPTWVTAEQLRETYCKWAHDYPIVSIEDPYDQ 299 (432)
T ss_dssp CEEEEECCGGGGEETTTTEEETTTTSS---SCCEECHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred cEEEEECcccccccccCceeEeecccc---ccCCCCHHHHHHHHHHHHHhCCceEEECCCCc
Confidence 999999999999986 8999832211 14568999999999999999999999999975
No 9
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=100.00 E-value=4.7e-64 Score=492.31 Aligned_cols=289 Identities=55% Similarity=0.858 Sum_probs=269.7
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|++|+|+||||+|||+|+|+|++|.. ++++|+|+|||.+||+|+||+++.+|.|+|+..++++|++.|+|.|+
T Consensus 1 ~~I~~v~~~~v~~srg~~~v~V~v~td~G~~Gge~~p~~~~~G~~ea~e~rd~~~~~y~g~~~~~~~~~i~~~l~p~Li- 79 (431)
T 2fym_A 1 SKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALI- 79 (431)
T ss_dssp CBEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCCCSSCSSSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHT-
T ss_pred CeeEEEEEEEEEcCCCCeeEEEEEEECCCCccceecCcccccCcccceeccCCcccccccccHHHHHHHHHHHHHHHHc-
Confidence 7999999999999999999999999999987 99999999999999999999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC-CccccccceEEeecCCcC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN-SNIILPVPAFNVINGGSH 158 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~-~~~~lP~P~~nvinGG~h 158 (299)
|+|+.+|++||+.|.+++||+|++++|+||+.|||||++.+.|+..|+|||+||+..... ..+.+|+|++|++|||.|
T Consensus 80 -G~d~~~~~~i~~~l~~~~g~~~~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLGG~~~~~~~~~~pv~~~~~~~gg~~ 158 (431)
T 2fym_A 80 -GKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEH 158 (431)
T ss_dssp -TSBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHTTCTTCCCCCEECEEEEECGGG
T ss_pred -CCCHHHHHHHHHHHHHhhCCCcccchhHHHHHHHHHHHHHHHHHHhCCcHHHHhcCcccccccccccceeEeeccCccc
Confidence 799999999999999999999999999999999999999999999999999999932111 123499999999999999
Q ss_pred CCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccc-
Q psy12655 159 AGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT- 237 (299)
Q Consensus 159 a~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~- 237 (299)
+++.+++||||++|.++.++++++++..+.|++||.+++++ |. .+.+|++|||+|++++..+.|+.|++|++++||+
T Consensus 159 ~~~~l~~~~~mi~p~~~~~~~~a~~~~~~g~~~lK~~l~~~-g~-~~kvG~~gg~~~~~~~d~~~l~~vreai~~~g~~~ 236 (431)
T 2fym_A 159 ADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAK-GM-NTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYEL 236 (431)
T ss_dssp SSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCB
T ss_pred cccccCcchhcccCccchhHHHHHHHHHHHHHHHHHHHHhc-Cc-ccccCcccCCCCCccchHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999966 74 5899999999999999999999999999999999
Q ss_pred -cceEEEeeccccccccCCceeeecCCCCCCCC-CccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 238 -GKVEIGMDVAASEFFKEGQYDLDFKNPNSDKS-QWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 238 -~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~-~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
+++.|++|+||||||++|+|++.+ .+ ..+|.+|+++++.+|.++|||.+|||||.+
T Consensus 237 G~dv~l~vDaaas~~~~~~~Y~~~~------~n~~~~t~~~ai~~~~~L~~~~~i~~iEePl~~ 294 (431)
T 2fym_A 237 GKDITLAMDCAASEFYKDGKYVLAG------EGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDE 294 (431)
T ss_dssp TTTBEEEEECCGGGGEETTEEEEGG------GTTEEECHHHHHHHHHHHHHHSCEEEEESCSCT
T ss_pred CCccEEEEeechhhccccCceeecc------CCCCCCCHHHHHHHHHHHHHhCCceEEECCCCc
Confidence 579999999999999999999942 22 568999999999999999999999999974
No 10
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=100.00 E-value=1.9e-62 Score=482.75 Aligned_cols=289 Identities=50% Similarity=0.808 Sum_probs=265.6
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
.|++|++||||||||+|||+|+|+|++|.. +.++|+|+|||.+||+|+||+++.+|.|+||..++++|++.|+|.|+
T Consensus 13 ~i~~~~~r~i~dsrg~~~v~V~V~td~G~~Gge~~p~~~~tG~~ea~elrd~~~~~~~g~~v~~a~~~i~~~l~p~Li-- 90 (444)
T 1w6t_A 13 IITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNIIAEAII-- 90 (444)
T ss_dssp BEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCC---CCSSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHT--
T ss_pred hcceeEEEEEEcCCCCceEEEEEEECCCCEeeEecccccccccceeeeeccCcccccccccHHHHHHHHHHHHHHHHc--
Confidence 499999999999999999999999999987 89999999999999999999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAG 160 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~ 160 (299)
|+|+.+|.+||+.|.+++||+|++.+|+||+.|||||++.+.|+..|+|||++|+ |.....+|+|++|++|||.|++
T Consensus 91 G~d~~~~~~i~~~l~~~~g~~~~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLG---G~~~~~vp~~~~~~~~gg~~a~ 167 (444)
T 1w6t_A 91 GYDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEIPLYSYLG---GFNTKVLPTPMMNIINGGSHSD 167 (444)
T ss_dssp TSBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHH---CTTCCEECEECEEEEECGGGCS
T ss_pred CCCHHHHHHHHHHHHHhhCCCccccchhHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCcccccccccceeccccccc
Confidence 7999999999999999999999999999999999999999999999999999999 7655689999999999999999
Q ss_pred CcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHccccc--
Q psy12655 161 NKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTG-- 238 (299)
Q Consensus 161 ~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~-- 238 (299)
+++++|||||+|.++.++++++++..+.|+++|.+|+.+ |. .+.+|++|||+|++++..+.++.|++|++++||++
T Consensus 168 ~~l~~qe~mi~p~~~~~~~~a~~~~~~g~~~lK~~lk~k-g~-~~kvG~~gg~~~~~~~d~~~l~avreav~~agy~pG~ 245 (444)
T 1w6t_A 168 APIAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSR-GL-ETAVGDEGGFAPRFEGTEDGVETILAAIEAAGYVPGK 245 (444)
T ss_dssp SSCCCSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCBTT
T ss_pred cccchhHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhc-CC-ccccCCCCCCCCchHhHHHHHHHHHHHHHHhccCCCC
Confidence 999999999999999999999999999999999999866 75 58999999999999999999999999999999984
Q ss_pred ceEEEeecccccccc--CCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 239 KVEIGMDVAASEFFK--EGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 239 ~i~ialD~AAse~~~--~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
++.|.+|+||||||+ +++|+++ ++. ......+|.+|+++++.+|.++|||.+|||||.+
T Consensus 246 dv~L~vDaaas~~~~~~n~~y~~~-~n~-~~~~~~~t~~eai~~~~~l~~~~~i~~iEePl~~ 306 (444)
T 1w6t_A 246 DVFLGFDCASSEFYDKERKVYDYT-KFE-GEGAAVRTSAEQIDYLEELVNKYPIITIEDGMDE 306 (444)
T ss_dssp TBEEEEECCGGGGBC--CCCEETH-HHH-CTTCCEECHHHHHHHHHHHHHHSCEEEEESCSCT
T ss_pred CcEEEEEccchhcccccCCceeec-ccc-CcccCCCCHHHHHHHHHHHHHhCCcEEEECCCCh
Confidence 799999999999998 7899872 100 0001447999999999999999999999999974
No 11
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.3e-56 Score=438.79 Aligned_cols=285 Identities=55% Similarity=0.874 Sum_probs=269.9
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|++|+|.||||+|+|.|+|+|++|.. +|++|+|+|||.+||+|+||+++ +|.|+|+..++..|++.|+|.|+
T Consensus 9 MkI~~i~~~~v~~s~g~~~v~V~v~td~G~~G~G~~~~~~~tg~~ea~~~~d~~~-~~~g~~~~~~~~~i~~~l~p~Li- 86 (427)
T 2pa6_A 9 FEIKDIVAREVIDSRGNPTVEVEVITKGNGYGSAIVPSGASTGTHEALELRDKEK-RFGGKGVLMAVENVNSIIRPEIL- 86 (427)
T ss_dssp GBEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCCCSSCSSSCCCCCCCSS-GGGGTCCHHHHHHHHHTHHHHHT-
T ss_pred CEEEEEEEEEEEcCCCCceEEEEEEECCCCeeeEecccccccCcceeEeecCCcc-ccccccHHHHHHHHHHHHHHHHc-
Confidence 6899999999999999999999999999987 99999999999999999999998 99999999999999999999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHA 159 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha 159 (299)
|+|+.+|.+||+.|.++++|.+++.+++||+.||++|++.+.|+..|+|||++|+ |.....+|+|++|++|||.|+
T Consensus 87 -G~d~~~~~~i~~~l~~~~~~~~~~~~~~~A~~avd~AlwDl~ak~~g~Pl~~lLG---g~~~~~vp~~~~~~~~gg~~~ 162 (427)
T 2pa6_A 87 -GYDARMQREIDTIMIELDGTPNKSRLGANAILAVSLAVAKAAAATAKIPLYKYLG---GFNSYVMPVPMMNVINGGKHA 162 (427)
T ss_dssp -TCBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---CSCCCEECEECEEEEECSTTT
T ss_pred -CCCHHHHHHHHHHHHHhhCCCccccchHHHHHHHHHHHHHHHHHHhCCcHHHHhc---Cccccccccchhccccccccc
Confidence 7999999999999999999999999999999999999999999999999999999 765557999999999999999
Q ss_pred CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccc
Q psy12655 160 GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGK 239 (299)
Q Consensus 160 ~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~ 239 (299)
++++++||||++|.++.+++++.++..+.|+++|..++.|+|...+++||+|||+|++++..+.++.|++|++++|++++
T Consensus 163 ~~~l~~~~~~~~p~~~~~~~~a~~~~~~g~~~lK~~l~~K~G~~~~~vg~~gg~~~~~~~d~~~v~~vreav~~~G~~~~ 242 (427)
T 2pa6_A 163 GNDLDLQEFMIMPVGATSISEAVRMGSEVYHVLKNVILEKYGKNAVNVGDEGGFAPPLKTSREALDLLTESVKKAGYEDE 242 (427)
T ss_dssp SSSCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCTTSCCBCTTSCBCCSCCSHHHHHHHHHHHHHHHTCTTT
T ss_pred cCCcCHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCcCCcCCCccchHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999998777875688999999999999999999999999999998667
Q ss_pred eEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 240 VEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 240 i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
+.|.+|++||+||+++.|++. ++.+|.+|++++|.+++++|||.+|||||.+
T Consensus 243 ~~L~vDa~as~~~~n~~~~~~--------n~~~~~~~ai~~~~~~l~~~~i~~iEeP~~~ 294 (427)
T 2pa6_A 243 VVFALDAAASEFYKDGYYYVE--------GKKLTREELLDYYKALVDEYPIVSIEDPFHE 294 (427)
T ss_dssp CEEEEECCGGGGEETTEEEET--------TEEECHHHHHHHHHHHHHHSCEEEEECCSCT
T ss_pred cEEEEEcchhccccCCceeec--------CCCCCHHHHHHHHHHHHhhCCCcEEEcCCCh
Confidence 999999999999999999982 3568999999999999999999999999974
No 12
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=99.93 E-value=3.2e-26 Score=222.10 Aligned_cols=236 Identities=15% Similarity=0.144 Sum_probs=173.8
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|+++.+. ++ +|+|.|+|.|++| . .|-+|+| .++..++..|++ ++|.|+
T Consensus 6 MkI~~i~~~~~~-~~-~~~v~V~v~td~G-~G~Ge~~~g---------------------~~~~~~~~~i~~-l~p~li- 59 (410)
T 2qq6_A 6 PRITRVETAAIR-AV-GPSVLVRVWAGDE-HGLGECYPS---------------------APAAGIHHIVMN-MEEQLL- 59 (410)
T ss_dssp CCCCEEEEEEEC-CC--CEEEEEEEETTE-EEEEEECCC---------------------SCHHHHHHHHHT-THHHHT-
T ss_pred ceEeEEEEEEEC-CC-CCEEEEEEEECCc-EEEEEecCC---------------------CChHHHHHHHHH-HHHHhC-
Confidence 789999999997 77 6799999999988 6 6665532 146778888988 999998
Q ss_pred CCCCccchHHHHHHHHhhc-CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeec-C-C
Q psy12655 80 ESFEVTQQKEIDEFMIKLD-GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVIN-G-G 156 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lD-gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvin-G-G 156 (299)
|.|+.++..|++.|.+.+ +|.+++.++.||+.|+++|++.+.|+..|+|||++|+ |.. .-++|+.+.++ | +
T Consensus 60 -G~d~~~~~~i~~~l~~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~~--~~~vp~y~~~~~g~~ 133 (410)
T 2qq6_A 60 -GEDPRDVERLYEKMRRWNIFTGGQAGAVITALSGIETALWDLAGKLQGVPVYRLLG---GAF--RRRVRLYADCNAGTV 133 (410)
T ss_dssp -TCCTTCHHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHTSCGGGGTT---CCS--CSEEEEEEECCCSEE
T ss_pred -CCCccHHHHHHHHHHHhhhcccCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCc--cCceeEEEecccccc
Confidence 799999999999998876 7778888889999999999999999999999999998 643 46789999998 7 8
Q ss_pred cCCCCcc-cceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcc
Q psy12655 157 SHAGNKL-AMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAG 235 (299)
Q Consensus 157 ~ha~~~l-~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag 235 (299)
.|++|++ ++||||+.|. ...+++.++..+-|+.+|-.+..++|...+ .++|||.| ..+.+..++.+...-+.+|
T Consensus 134 ~h~~~~~~~~~~~~~~~~--~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~--~~~G~~~~-~~~~~~~~e~v~avRea~G 208 (410)
T 2qq6_A 134 DAAAHHIEGGLFEEGSNE--EYIAVAREAVERGFDAIKLDVDDITGPLHR--DFWNGAIS-PREHEAMVARVAAVREAVG 208 (410)
T ss_dssp CTTCCEEECCTTCSTHHH--HHHHHHHHHHHTTCSEEEEECCCSSSTTCS--CSSSCCCC-HHHHHHHHHHHHHHHHHHC
T ss_pred ccccccccccccccCCHH--HHHHHHHHHHHcCCCEEEeeccccCCcccC--CcCccccc-hhhHHHHHHHHHHHHHhcC
Confidence 9999987 6999987662 223344444333344343211111132112 27888876 2234455555544444455
Q ss_pred cccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 236 YTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 236 ~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.++.|.+|+. +. +|.+|.++++.. +++|+|.+||||+.
T Consensus 209 --~d~~l~vDan-------~~---------------~~~~~a~~~~~~-l~~~~i~~iEeP~~ 246 (410)
T 2qq6_A 209 --PEVEVAIDMH-------GR---------------FDIPSSIRFARA-MEPFGLLWLEEPTP 246 (410)
T ss_dssp --SSSEEEEECT-------TC---------------CCHHHHHHHHHH-HGGGCCSEEECCSC
T ss_pred --CCCEEEEECC-------CC---------------CCHHHHHHHHHH-HhhcCCCeEECCCC
Confidence 4688999972 22 356888888755 78899999999986
No 13
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=99.90 E-value=2e-23 Score=201.64 Aligned_cols=232 Identities=19% Similarity=0.235 Sum_probs=169.1
Q ss_pred CceeeEEEeEEeCCCCCe--eEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHH
Q psy12655 1 MPISKIHARQIFDSRGNP--TVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPA 76 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~p--Tvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~ 76 (299)
|+|++|+++.+.+|+++| +|.|+|.|++|.. .|-+ |+ +|. +.......|++ |+|.
T Consensus 3 MkI~~i~~~~~~~~~~~~~~~v~V~v~td~G~~G~Ge~~~~---~g~-----------------~~~~~~~~i~~-l~p~ 61 (403)
T 2ox4_A 3 LKITKIEIFHVHTRPQSGQRPILVKVSTDEGIYGLGEAGIA---YGV-----------------GGSAAAGILKD-YAAL 61 (403)
T ss_dssp CCEEEEEEEEECCCTTTCCCCEEEEEEETTSCEEEEEESCS---SSS-----------------CHHHHHHHHHH-HHHH
T ss_pred CeEEEEEEEEecCCCCCCccceEEEEEeCCCCEEEEeecCC---CCC-----------------chHHHHHHHHH-HHHH
Confidence 789999999999998888 8899999999987 7776 54 221 22344566777 9999
Q ss_pred HhcCCCCccchHHHHHHHHhhc-CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEe-ec
Q psy12655 77 LLKESFEVTQQKEIDEFMIKLD-GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNV-IN 154 (299)
Q Consensus 77 Li~~g~~~~dQ~~ID~~L~~lD-gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nv-in 154 (299)
|+ |.|+.++..|++.|.+.+ +|++++.++.||+.|+++|++.+.|+..|+|||++|+ |.. .-|+|+.+. ++
T Consensus 62 l~--G~d~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~--~~~vp~y~~~i~ 134 (403)
T 2ox4_A 62 LI--GEDPFNTEAIWEKLFKKTFWGQGGGTVIFSGISAFDIAFWDIKGKALNLPVYKLLG---GKN--REDLRVYASQLQ 134 (403)
T ss_dssp HT--TCCTTCHHHHHHHHHHSSSGGGTCBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCS--SSSEEEEEECGG
T ss_pred cC--CCCHHHHHHHHHHHHHhcccccCCcHHHHhHHHHHHHHHHHHhHhHcCCcHHHHcC---CCC--CCceeeeEeecc
Confidence 98 799999999999998765 5667778889999999999999999999999999998 643 346889998 88
Q ss_pred -C-CcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhh----cCCCCcccCCCCCcCCCCCChHHHHHHHH
Q psy12655 155 -G-GSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTK----FGLDATAVGDEGGFAPNILDNKEGLRLIV 228 (299)
Q Consensus 155 -G-G~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k----~G~~~t~vgdeGgfap~~~~~e~aL~ll~ 228 (299)
| +.|+++.+++|+| ++++.++..+-|+.+| ++-. .|.. -..+.||+.+ ..+.+..++.+.
T Consensus 135 ~g~~~~~~~~~~~e~~---------~~~a~~~~~~Gf~~vK--ik~~~~~~~G~~--~~s~~~g~~~-~~~~~~~~e~v~ 200 (403)
T 2ox4_A 135 FGWGKERKSKGRKEEY---------AEEALKAVAEGYDAVK--VDVLAHDRNGSR--EGVFLEGPLP-SETIKIGVERVE 200 (403)
T ss_dssp GCSSSSCCCCCSHHHH---------HHHHHHHHHTTCSEEE--ECCSSSCTTSCC--TTCCCSSSCC-HHHHHHHHHHHH
T ss_pred CCccccccccCCHHHH---------HHHHHHHHHcCCCEEE--EeccccCCcccc--ccCcccCCCc-hHHHHHHHHHHH
Confidence 7 8999998888876 4455554444454444 2100 0210 1123466543 123344555555
Q ss_pred HHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 229 EAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 229 eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
..-+.+| .++.|.+|+. +. +|.+|.+++++. +++|+|.+||||+.+
T Consensus 201 avr~avG--~d~~l~vDan-------~~---------------~~~~~ai~~~~~-l~~~~i~~iE~P~~~ 246 (403)
T 2ox4_A 201 AIRNAVG--PDVDIIVENH-------GH---------------TDLVSAIQFAKA-IEEFNIFFYEEINTP 246 (403)
T ss_dssp HHHHHHC--TTSEEEEECT-------TC---------------SCHHHHHHHHHH-HGGGCEEEEECCSCT
T ss_pred HHHHHhC--CCCeEEEECC-------CC---------------CCHHHHHHHHHH-HHhhCCCEEeCCCCh
Confidence 4444455 4688999971 22 456899998775 788999999999863
No 14
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=99.86 E-value=1.1e-21 Score=189.79 Aligned_cols=230 Identities=19% Similarity=0.273 Sum_probs=164.3
Q ss_pred CceeeEEEeEEeC--CCCCe----eEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHh
Q psy12655 1 MPISKIHARQIFD--SRGNP----TVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINND 72 (299)
Q Consensus 1 ~~I~~v~ar~ilD--srG~p----Tvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~ 72 (299)
|+|++|+.+.+.+ ++|+| ||.|+|.|++|.. .|-+ |+ +|. +.......|++
T Consensus 3 MkI~~i~~~~~~~pl~~~~~~~~~~v~V~v~td~G~~G~Ge~~~~---~g~-----------------~~~~~~~~i~~- 61 (410)
T 2gl5_A 3 LKITSIEVFDCELKKRDQTMSSYNPVLIRVNTDSGLSGIGEVGLA---YGA-----------------GAKAGVGIIRD- 61 (410)
T ss_dssp CCEEEEEEEECCGGGTCGGGTTCCCEEEEEEETTSCEEEEEESCS---SST-----------------THHHHHHHHHH-
T ss_pred ceEEEEEEEEecccccccCcccccceEEEEEeCCCCEEEEeecCc---CCC-----------------ChHHHHHHHHH-
Confidence 7899999999976 66667 8899999999987 7776 54 121 23344556777
Q ss_pred HHHHHhcCCCCccchHHHHHHHHhhc-CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEE
Q psy12655 73 IAPALLKESFEVTQQKEIDEFMIKLD-GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFN 151 (299)
Q Consensus 73 i~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~n 151 (299)
|+|.|+ |.|+.++..|++.|.+.+ +|.+++.++.||+.|+++|++.+.|+..|+|||++|+ |.. +-++|+.+
T Consensus 62 l~p~li--G~d~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~--~~~vp~y~ 134 (410)
T 2gl5_A 62 LAPLIV--GEDPLNIEKIWEFFFRKTFWGMGGGNVFYAGMSAIDIALWDIKGKYLGVPVYQLLG---GKT--NEKLRTYA 134 (410)
T ss_dssp HGGGTT--TSCTTCHHHHHHHHHHSSSGGGSCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---SCS--CSSEEEEE
T ss_pred HHHHhC--CCChHHHHHHHHHHHHhcccccCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcC---CCc--cCceeEeE
Confidence 999998 799999999999998765 5556677778999999999999999999999999998 643 23688898
Q ss_pred e-ec-C-CcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccC----------CCCCcCCCCC
Q psy12655 152 V-IN-G-GSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVG----------DEGGFAPNIL 218 (299)
Q Consensus 152 v-in-G-G~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vg----------deGgfap~~~ 218 (299)
. ++ | +.|+++.+++|+| .+++.++..+-|+.+| |+- .+ .+..| ++||+.+. .
T Consensus 135 ~~i~~g~~~~~~~~~~~~~~---------~~~a~~~~~~Gf~~vK--ik~-~~--~~~~G~~~~~~~~~~~~GG~~~~-~ 199 (410)
T 2gl5_A 135 SQLQFGWGDKNHILVTPEEY---------AEAARAALDDGYDAIK--VDP-LE--IDRNGDDCVFQNRNRNYSGLLLA-D 199 (410)
T ss_dssp ECGGGCCTTCCSCCCSHHHH---------HHHHHHHHHTTCSEEE--ECS-SS--BCTTSCBTTTSSCCGGGGSCCCH-H
T ss_pred ecccCCccccccccCCHHHH---------HHHHHHHHHcCCCEEE--Eec-cc--cCCcccccccccccccccCccch-h
Confidence 8 88 7 8999888877776 3344443333344333 110 00 01123 37777651 2
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+..++.+...-+.+| .++.|.+|+. +. +|.+|.+++++. +++|+|.+||||+.
T Consensus 200 ~~~~~~e~v~avR~a~G--~d~~l~vDan-------~~---------------~~~~~ai~~~~~-l~~~~i~~iE~P~~ 254 (410)
T 2gl5_A 200 QLKMGEARIAAMREAMG--DDADIIVEIH-------SL---------------LGTNSAIQFAKA-IEKYRIFLYEEPIH 254 (410)
T ss_dssp HHHHHHHHHHHHHHHHC--SSSEEEEECT-------TC---------------SCHHHHHHHHHH-HGGGCEEEEECSSC
T ss_pred HHHHHHHHHHHHHHhcC--CCCEEEEECC-------CC---------------CCHHHHHHHHHH-HHhcCCCeEECCCC
Confidence 33444555444434455 4688889972 22 456899998866 68899999999986
No 15
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=99.85 E-value=4.6e-21 Score=185.35 Aligned_cols=229 Identities=19% Similarity=0.276 Sum_probs=161.1
Q ss_pred CceeeEEEeEEeCCCCCe-----eEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhH
Q psy12655 1 MPISKIHARQIFDSRGNP-----TVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDI 73 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~p-----Tvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i 73 (299)
|+|++|+.+.+.+++++| +|.|+|.|++|.. .|.+ |+ +|. +....+..|++ +
T Consensus 4 MkI~~i~~~~~~~p~~~p~~~~~~v~V~v~td~G~~G~Ge~a~~---~g~-----------------~~~~~~~~i~~-l 62 (407)
T 2o56_A 4 MKITSVDIIDVANDFASATSKWRPVVVKINTDEGISGFGEVGLA---YGV-----------------GASAGIGMAKD-L 62 (407)
T ss_dssp CCEEEEEEEECCCCC-----CCCCEEEEEEETTSCEEEEEESCS---SSS-----------------CHHHHHHHHHH-H
T ss_pred CEEEEEEEEEeccccCCCcccceeEEEEEEeCCCCEEEEeeccC---CCC-----------------chHHHHHHHHH-H
Confidence 789999999999999999 8899999999986 7766 54 221 22344566777 9
Q ss_pred HHHHhcCCCCccchHHHHHHHHhhc-CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEe
Q psy12655 74 APALLKESFEVTQQKEIDEFMIKLD-GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNV 152 (299)
Q Consensus 74 ~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nv 152 (299)
+|.|+ |.|+.++..|++.|.+.+ +|.+++.++.||+.|+++|++.+.|+..|+|||++|+ |.. .-++|+.+.
T Consensus 63 ~p~li--G~d~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~--~~~vp~y~~ 135 (407)
T 2o56_A 63 SAIII--GMDPMNNEAIWEKMLKKTFWGQGGGGIFSAAMSGIDIALWDIKGKAWGVPLYKMLG---GKS--REKIRTYAS 135 (407)
T ss_dssp HHHHT--TSCTTCHHHHHHHHHHSSSGGGGCBHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCS--CSSEEEEEE
T ss_pred HHHhC--CCChHHHHHHHHHHHHhccccCCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcC---CCC--CCeeeeeee
Confidence 99998 799999999999998765 5556667778999999999999999999999999998 642 467888988
Q ss_pred -ec-C-CcCC--CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhc------CCCCcccCCCCCcCCCCCChH
Q psy12655 153 -IN-G-GSHA--GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKF------GLDATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 153 -in-G-G~ha--~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~------G~~~t~vgdeGgfap~~~~~e 221 (299)
++ | +.|+ ++.++.|+| .+++.++..+-|+.+| + |. |. ...+++||+.+ ..+.+
T Consensus 136 ~i~~g~~~~~~~~~~~~~~~~---------~~~a~~~~~~Gf~~vK--i--k~~~~~~~G~--~~~s~~~~~~~-~~~~~ 199 (407)
T 2o56_A 136 QLQFGWGDGSDKDMLTEPEQY---------AQAALTAVSEGYDAIK--V--DTVAMDRHGN--WNQQNLNGPLT-DKILR 199 (407)
T ss_dssp CGGGCCSTTCTTCCCCSHHHH---------HHHHHHHHHTTCSEEE--E--CCSSBCTTSC--BSCSCCCSSCC-HHHHH
T ss_pred eccCCccccccccccCCHHHH---------HHHHHHHHHcCCCEEE--E--cccccCCcCc--cccCcccCCCc-hhHHH
Confidence 87 6 7888 566666665 3334333333333333 1 11 21 01234666553 22344
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
..++.+...-+.+| .++.|.+|+. +. +|.+|.++++.. +++|+|.+||||+.
T Consensus 200 ~~~e~v~avR~a~G--~d~~l~vDan-------~~---------------~~~~~a~~~~~~-l~~~~i~~iE~P~~ 251 (407)
T 2o56_A 200 LGYDRMAAIRDAVG--PDVDIIAEMH-------AF---------------TDTTSAIQFGRM-IEELGIFYYEEPVM 251 (407)
T ss_dssp HHHHHHHHHHHHHC--TTSEEEEECT-------TC---------------SCHHHHHHHHHH-HGGGCCSCEECSSC
T ss_pred HHHHHHHHHHHhcC--CCCEEEEECC-------CC---------------CCHHHHHHHHHH-HHhcCCCEEeCCCC
Confidence 55555554444456 4688999961 22 456898888765 68899999999986
No 16
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=99.83 E-value=3.2e-20 Score=178.77 Aligned_cols=226 Identities=21% Similarity=0.232 Sum_probs=154.7
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHH-HHh
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAP-ALL 78 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p-~Li 78 (299)
|+|++|+.|.+. ++++++|.|+|.|++|.. .|-+++ . | |+++..++..|++ ++| .|+
T Consensus 3 mkI~~i~~~~v~-~~~~~~v~V~v~td~G~~G~GE~~~---~---------------~-g~~~~~~~~~i~~-l~~~~l~ 61 (392)
T 2poz_A 3 LKITGVNIYLLK-SGRLHPVLVEISTDEGITGAGEAGI---A---------------Y-GVGGTAAAGMIKD-LSERFLI 61 (392)
T ss_dssp CCEEEEEEEECC-BTTBCCEEEEEEETTSCCEEEEESC---S---------------S-SSCHHHHHHHHHH-HHHHHTT
T ss_pred CeEEEEEEEEEe-cCCccEEEEEEEECCCCEEEEeecC---C---------------c-CCchHHHHHHHHH-hhHhhhc
Confidence 789999999999 999999999999999865 555443 0 3 6677788888885 899 998
Q ss_pred cCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCc
Q psy12655 79 KESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGS 157 (299)
Q Consensus 79 ~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ 157 (299)
|+|+.++..|++.|.+. ++|.+++.++.||+.|+++|++.+.|+..|+|||++|+ |... -|+|+.+. |
T Consensus 62 --G~d~~~~~~i~~~l~~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~~~--~~v~~y~~---g- 130 (392)
T 2poz_A 62 --GKDPSRIEELWSTMYDHSFWAKNGGAIIFAGISAIEQALWDIKGKCLGVPVYELFG---GKIR--DRVRAYAN---G- 130 (392)
T ss_dssp --TCCTTCHHHHHHHHHHHSSTTTTCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSC--SEEEEEEC---S-
T ss_pred --CCChhHHHHHHHHHHHhcccccCCchHHHHHHHHHHHHHHHHhhhhcCCcHHHHcC---CCcc--CceEEEEe---c-
Confidence 79999999999999775 78888888889999999999999999999999999998 6432 27888876 3
Q ss_pred CCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCC-CCCcCCCC---CChHHHHHHHHHHHHH
Q psy12655 158 HAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGD-EGGFAPNI---LDNKEGLRLIVEAIEK 233 (299)
Q Consensus 158 ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgd-eGgfap~~---~~~e~aL~ll~eAi~~ 233 (299)
|..+..+.|+| .+++.++..+-|+.+| -|.|.... |. -++|.+.- .+.+..++.+...-+.
T Consensus 131 ~~~~~~~~~~~---------~~~a~~~~~~Gf~~vK----ik~g~~~~--g~~~~~~~~gg~~~~~~~~~~e~v~avr~a 195 (392)
T 2poz_A 131 WYGAADTPDEF---------ARAVERPLKEGYGALK----FYPLAQRV--GSALQHVTRRSMSAEAIELAYRRVKAVRDA 195 (392)
T ss_dssp CCTTCCSHHHH---------HHHTHHHHHTTCSEEE----ECCCCEEE--TTEEECCBTTBCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHH---------HHHHHHHHHcCCCEEE----Eecccccc--cccccccccCCcchhhHHHHHHHHHHHHHh
Confidence 54333344443 2222222222222222 01110000 00 01332211 2334455555544444
Q ss_pred cccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 234 AGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 234 ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+| .++.|.+|+. +. +|.+|.++++.. +++|+|.+||||+.
T Consensus 196 ~G--~d~~l~vD~n-------~~---------------~~~~~a~~~~~~-l~~~~i~~iE~P~~ 235 (392)
T 2poz_A 196 AG--PEIELMVDLS-------GG---------------LTTDETIRFCRK-IGELDICFVEEPCD 235 (392)
T ss_dssp HC--TTSEEEEECT-------TC---------------SCHHHHHHHHHH-HGGGCEEEEECCSC
T ss_pred cC--CCCEEEEECC-------CC---------------CCHHHHHHHHHH-HHhcCCCEEECCCC
Confidence 55 4688999972 22 456898998776 68899999999986
No 17
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=99.71 E-value=1.2e-17 Score=162.53 Aligned_cols=210 Identities=20% Similarity=0.224 Sum_probs=141.2
Q ss_pred CeeEEEEEEECCCce-EEEee----cCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHH
Q psy12655 17 NPTVEVDLTTELGLF-RAAVP----SGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEID 91 (299)
Q Consensus 17 ~pTvevev~~~~g~~-ra~~p----sGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID 91 (299)
.|+|.|+|.|++|.. .|.++ ||+|+ || ..|.|.++..++ ++.++|.|+ |.++.++..|+
T Consensus 50 ~~~v~V~v~td~G~~G~GE~~~~~~sGa~~--------r~---~~~~~~~~~~~i---~~~l~p~Li--G~d~~~~~~i~ 113 (413)
T 1kko_A 50 GECVSVQLILENGAVAVGDCAAVQYSGAGG--------RD---PLFLAEHFIPFL---NDHIKPLLE--GRDVDAFLPNA 113 (413)
T ss_dssp EEEEEEEEEETTSCEEEEEECCCTTTTSTT--------CC---CCCCHHHHHHHH---HHHTHHHHT--TCBCSCSHHHH
T ss_pred cceEEEEEEECCCCEEEEEecccccccccc--------cC---ccccHHHHHHHH---HHHHHHHHc--CCChHhHHHHH
Confidence 478999999999987 77776 88885 22 257776666654 667999998 78999999999
Q ss_pred HHHHhhcCCCCccc-CCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc---ccccceEEeecCCcCCCCccc---
Q psy12655 92 EFMIKLDGTENKSK-FGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNI---ILPVPAFNVINGGSHAGNKLA--- 164 (299)
Q Consensus 92 ~~L~~lDgT~nks~-lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~---~lP~P~~nvinGG~ha~~~l~--- 164 (299)
+.|.... ++++ .+.|++.|+++|++.+.|+..++|||++|+ |.... +-|+|+.+. ||.|+.+.++
T Consensus 114 ~~l~~~~---~~~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLG---g~~~~~l~~~~vp~y~~--~g~~~~~~~~~~~ 185 (413)
T 1kko_A 114 RFFDKLR---IDGNLLHTAVRYGLSQALLDATALASGRLKTEVVC---DEWQLPCVPEAIPLFGQ--SGDDRYIAVDKMI 185 (413)
T ss_dssp HHHHHCE---ETTEECCHHHHHHHHHHHHHHHHHHHTCCHHHHHH---HHTTCCCCCCCCCEECC--CTTCTTHHHHHHH
T ss_pred HHHHhhh---cccCccHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CccccccccCCeEEEEe--cCccccCCHHHHH
Confidence 9885542 3333 568999999999999999999999999998 42211 338999885 7777654332
Q ss_pred ceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHH---HHHH-HHcccccce
Q psy12655 165 MQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLI---VEAI-EKAGYTGKV 240 (299)
Q Consensus 165 iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll---~eAi-~~ag~~~~i 240 (299)
.|...+++.| +|+ .+| ..+|. +.+...++++.. .+|| +.+|+ ++
T Consensus 186 ~~~~~~~~~G-------------~~~----~iK-------~KvG~------~~~~~~~~l~~d~~~v~aiR~~~G~--~~ 233 (413)
T 1kko_A 186 LKGVDVLPHA-------------LIN----NVE-------EKLGF------KGEKLREYVRWLSDRILSLRSSPRY--HP 233 (413)
T ss_dssp HTTCSEEEET-------------TCC----CCC-------CCCCT------TSHHHHHHHHHHHHHHHHHCSSTTC--CC
T ss_pred HHHHHHHhCC-------------Ccc----EEE-------EecCC------ChhhHHHHHHHHHHHHHHHHHhhCC--CC
Confidence 2333444444 011 111 11232 111122333333 3455 33443 69
Q ss_pred EEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhc-CCe-eEeecCCC
Q psy12655 241 EIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKE-YPI-VSIEDPML 298 (299)
Q Consensus 241 ~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~-yPI-vsiEDp~~ 298 (299)
.|.+|+.. +|.+. ..+|.+|.++++..|.+. ||+ ++||||+.
T Consensus 234 ~L~vDan~-------~~~~~---------~~~~~~~A~~~~~~L~~~~~~~~l~iEqP~~ 277 (413)
T 1kko_A 234 TLHIDVYG-------TIGLI---------FDMDPVRCAEYIASLEKEAQGLPLYIEGPVD 277 (413)
T ss_dssp EEEEECTT-------HHHHH---------TTTCHHHHHHHHHHTGGGGTTSCEEEECCCC
T ss_pred eEEEECCC-------ccccc---------cCCCHHHHHHHHHHHHhccCCcceEEECCcC
Confidence 99999864 45442 125889999999999886 442 29999996
No 18
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=99.70 E-value=5.2e-17 Score=158.37 Aligned_cols=188 Identities=19% Similarity=0.165 Sum_probs=134.0
Q ss_pred eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHh
Q psy12655 18 PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIK 96 (299)
Q Consensus 18 pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~ 96 (299)
.+|.|+|.|++|.. .|.+++| ..++..+++.|+|.|+ |+++.++..|++.|.+
T Consensus 70 ~~v~V~v~td~G~~G~GE~~~g------------------------~~~~~~v~~~l~p~Li--G~d~~~~~~i~~~m~~ 123 (415)
T 2p3z_A 70 GTLIVEVEAENRQTGFAVSTAG------------------------EMGCFIVEKHLNRFIE--GKCVSDIKLIHDQMLG 123 (415)
T ss_dssp CEEEEEEEETTSCEEEEEEECH------------------------HHHHHHHHHTTHHHHT--TSBTTCHHHHHHHHHH
T ss_pred eEEEEEEEECCCCEEEEEecCC------------------------HHHHHHHHHHHHHHHC--CCChhhHHHHHHHHHH
Confidence 48999999999986 7776542 1345677888999998 7899999999999987
Q ss_pred hc-CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCCcccceeEEEEecCC
Q psy12655 97 LD-GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGA 175 (299)
Q Consensus 97 lD-gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga 175 (299)
.+ ++.+++.++.||+.|+++|++.+.|+..|+|||++|+ |..... +|+.++ |+ +
T Consensus 124 ~~~~~~g~~~~~~~A~said~ALwDl~ak~~g~Pl~~lLG---G~~~~~--vp~y~~--g~-------~----------- 178 (415)
T 2p3z_A 124 ATMYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLG---GAVRDE--IQFYAT--GA-------R----------- 178 (415)
T ss_dssp HHTTTSTTSSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSSSE--EEEEEE--SS-------C-----------
T ss_pred hhhcccCCCcchHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCc--eeeeec--CC-------C-----------
Confidence 65 5556677788999999999999999999999999998 643333 455654 32 1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccceEEEeeccccccccCC
Q psy12655 176 SSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEG 255 (299)
Q Consensus 176 ~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g 255 (299)
.+++++++ |+.+| -| .++|++|||. +.++.++.|...-+..| .++.|.+|+. +
T Consensus 179 --~~~~~~~G---~~~~K----iK-----~g~g~~~G~~----~~~~d~~~v~avrea~G--~~~~L~vDaN-------~ 231 (415)
T 2p3z_A 179 --PDLAKEMG---FIGGK----MP-----THWGPHDGDA----GIRKDAAMVADMREKCG--PDFWLMLDCW-------M 231 (415)
T ss_dssp --HHHHHHHT---CSEEE----EE-----CCCCGGGHHH----HHHHHHHHHHHHHHHHC--SSSEEEEECT-------T
T ss_pred --HHHHHHhC---cceEE----Ee-----cccCcccccc----cHHHHHHHHHHHHHHhC--CCCEEEEECC-------C
Confidence 12233322 22222 11 1457788875 33444555544444445 4799999972 2
Q ss_pred ceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCCC
Q psy12655 256 QYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPMLR 299 (299)
Q Consensus 256 ~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~e 299 (299)
. +|.+|.++++.. +++|+|.+|||||.+
T Consensus 232 ~---------------~~~~~Ai~~~~~-l~~~~i~~iEqPl~~ 259 (415)
T 2p3z_A 232 S---------------QDVNYATKLAHA-CAPFNLKWIEECLPP 259 (415)
T ss_dssp C---------------CCHHHHHHHHHH-HGGGTCCEEECCSCT
T ss_pred C---------------CCHHHHHHHHHH-HhhcCCceEeCCCCc
Confidence 2 456899999877 788999999999973
No 19
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=99.70 E-value=2.2e-16 Score=152.54 Aligned_cols=210 Identities=18% Similarity=0.242 Sum_probs=141.6
Q ss_pred CceeeEEEeEEe--------CCC----------CCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCcc
Q psy12655 1 MPISKIHARQIF--------DSR----------GNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKG 61 (299)
Q Consensus 1 ~~I~~v~ar~il--------Dsr----------G~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkg 61 (299)
|+|++|..+.+- .|+ ..++|.|+|.|++|.. .|.+|++. +.+
T Consensus 26 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~~~-----------------~~~-- 86 (398)
T 2pp0_A 26 DRIEWVKLSLAFLPLATPVSDAKVLTGRQKPLTEVAIIIAEIRSRDGFEGVGFSYSKR-----------------AGG-- 86 (398)
T ss_dssp CCEEEEEEEEEEEEEEEEECCHHHHTTSSCCEEEEEEEEEEEEETTSCEEEEEEEESS-----------------TTH--
T ss_pred CeEEEEEEEEEeccCCCcccccccccccccccCCCcEEEEEEEECCCCEEEEEecCcc-----------------chH--
Confidence 789999887772 222 2578999999999987 77777642 111
Q ss_pred HHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCC
Q psy12655 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNS 141 (299)
Q Consensus 62 v~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~ 141 (299)
.++..+.+.++|.|+ |.++.++..|++.|...++....+.++.||+.|+++|++.+.|+..|+|||++|+ |.
T Consensus 87 --~~~~~~~~~l~p~l~--G~d~~~~~~i~~~l~~~~~~~~~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLG---g~- 158 (398)
T 2pp0_A 87 --QGIYAHAKEIADNLL--GEDPNDIDKIYTKLLWAGASVGRSGMAVQAISPIDIALWDMKAKRAGLPLAKLLG---AH- 158 (398)
T ss_dssp --HHHHHHHHHHGGGGT--TSCTTCHHHHHHHHHHHTGGGCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHHC---CS-
T ss_pred --HHHHHHHHHHHHHHc--CCCchhHHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-
Confidence 145554556999998 7899999999999988875333345677999999999999999999999999998 65
Q ss_pred ccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCC
Q psy12655 142 NIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILD 219 (299)
Q Consensus 142 ~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~ 219 (299)
.-++|+.+.+ ||.|. .+.|+| .+++ ++..+ .|... ..+|+ .+
T Consensus 159 --~~~vp~y~~~-g~~~~---~~~e~~---------~~~a-----------~~~~~--~Gf~~vKik~g~--------~~ 202 (398)
T 2pp0_A 159 --RDSVQCYNTS-GGFLH---TPLDQV---------LKNV-----------VISRE--NGIGGIKLKVGQ--------PN 202 (398)
T ss_dssp --CSEEEEEECT-TSCTT---SCHHHH---------HHHH-----------HHHHH--TTCSCEEEECCC--------SC
T ss_pred --CCCeeEEEec-CCcCC---CCHHHH---------HHHH-----------HHHHH--hCCCeEEEecCC--------CC
Confidence 4678888876 44431 233332 1222 22222 13111 12232 23
Q ss_pred hHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 220 NKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 220 ~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+..++.+...-+..| .++.|.+|+- +. +|.+|.++++.. +++|+|.+||||+.
T Consensus 203 ~~~d~e~v~avR~avG--~d~~l~vDan-------~~---------------~~~~~ai~~~~~-l~~~~i~~iEqP~~ 256 (398)
T 2pp0_A 203 CAEDIRRLTAVREALG--DEFPLMVDAN-------QQ---------------WDRETAIRMGRK-MEQFNLIWIEEPLD 256 (398)
T ss_dssp HHHHHHHHHHHHHHHC--SSSCEEEECT-------TC---------------SCHHHHHHHHHH-HGGGTCSCEECCSC
T ss_pred HHHHHHHHHHHHHHcC--CCCeEEEECC-------CC---------------CCHHHHHHHHHH-HHHcCCceeeCCCC
Confidence 4555555533333335 4678888861 22 456888888776 68899999999986
No 20
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=99.69 E-value=6.9e-16 Score=150.70 Aligned_cols=207 Identities=20% Similarity=0.262 Sum_probs=144.6
Q ss_pred CceeeEEEeEE--------eCCCCC------eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN------PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~------pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
|+|++|+.+.+ .+|+|+ ++|.|+|.|++|.. .|-+++ | .++..+
T Consensus 39 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~v~V~v~td~G~~G~GE~~~----g-----------------~~~~~~ 97 (428)
T 3bjs_A 39 MKITKINAIPLSYRLPEGKTVTMGVGSTIKRDAIIIRVETSEGITGYGEAHP----G-----------------RSPGAI 97 (428)
T ss_dssp CBEEEEEEEEEEEECC---CCBCSSCBCSEEEEEEEEEEETTSCEEEEEECC----T-----------------TCHHHH
T ss_pred CEEeEEEEEEEecccCCcccccccccccccccEEEEEEEECCCCEEEEEecC----C-----------------CCHHHH
Confidence 78999999988 789998 89999999999875 554432 1 346677
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCC-Cccc--CCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTE-NKSK--FGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSN 142 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~-nks~--lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~ 142 (299)
+..|++.++|.|+ |.|+.++..|++.|.+ +|. ++++ ++.||+.|+++|++.+.|+..|+|||++|+ |.
T Consensus 98 ~~~i~~~l~p~li--G~d~~~~~~i~~~l~~--~~~~~~~~~g~~~~A~~aid~AlwDl~gk~~g~Pl~~lLG---g~-- 168 (428)
T 3bjs_A 98 TSLIHNTIAPMLI--GMKATDCVGAWQRVHR--MQLSSHGLGAGAALAISGIDMALWDIRGKAANMPLYELLG---GS-- 168 (428)
T ss_dssp HHHHHHTTTTTTT--TSBTTCHHHHHHHHHH--HTTTTTSCTHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CC--
T ss_pred HHHHHHHHHHHhC--CCCccCHHHHHHHHHH--hhhhccCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CC--
Confidence 8888888999998 7899999999999855 344 4433 356899999999999999999999999998 65
Q ss_pred cccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCCh
Q psy12655 143 IILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDN 220 (299)
Q Consensus 143 ~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~ 220 (299)
.-++|+.+. |..|.++. + +++ .+ +.++..+. |... ..+|+ +.
T Consensus 169 -~~~vp~~~s--g~~~~~~~-~-e~~---------~~-----------~a~~~~~~--Gf~~vKik~g~---------~~ 212 (428)
T 3bjs_A 169 -KRRIPAYAG--GIALGYQP-K-ESL---------AE-----------EAQEYIAR--GYKALKLRIGD---------AA 212 (428)
T ss_dssp -CCCEEEEEE--SSCSCSCC-H-HHH---------HH-----------HHHHHHHH--TCSEEEEECCS---------CH
T ss_pred -CCceeeeee--ccccCCCh-H-HHH---------HH-----------HHHHHHHC--CCCEEEECCCC---------CH
Confidence 457888876 55553221 0 111 11 22222221 2100 12232 45
Q ss_pred HHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 221 KEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 221 e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.++.+...-+..| .++.|.+|+- +. +|.+|.++++.. +++|+|.+||||+.
T Consensus 213 ~~d~e~v~avR~avG--~d~~l~vDan-------~~---------------~~~~eai~~~~~-L~~~~i~~iEqP~~ 265 (428)
T 3bjs_A 213 RVDIERVRHVRKVLG--DEVDILTDAN-------TA---------------YTMADARRVLPV-LAEIQAGWLEEPFA 265 (428)
T ss_dssp HHHHHHHHHHHHHHC--TTSEEEEECT-------TC---------------CCHHHHHHHHHH-HHHTTCSCEECCSC
T ss_pred HHHHHHHHHHHHhcC--CCCEEEEECC-------CC---------------CCHHHHHHHHHH-HHhcCCCEEECCCC
Confidence 666666643333335 4688889861 22 456888888765 78899999999986
No 21
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=99.69 E-value=1.7e-15 Score=145.96 Aligned_cols=212 Identities=15% Similarity=0.167 Sum_probs=143.2
Q ss_pred CceeeEEEeEEeC-------CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHh
Q psy12655 1 MPISKIHARQIFD-------SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINND 72 (299)
Q Consensus 1 ~~I~~v~ar~ilD-------srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~ 72 (299)
|+|++|+.|.+.. ++++|+|.|+|.|++|.. .|-+++.. +.+.++.. .|++
T Consensus 11 MkI~~i~~~~~~p~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~-----------------~~~~~~~~---~i~~- 69 (391)
T 2qgy_A 11 GKLSRLKIWITDNHLSDDQWSNTKKFIIIKITTEDGIEGWGEAFSIN-----------------FREKGIAI---IIKE- 69 (391)
T ss_dssp CCEEEEEEEEECCCBCGGGCSBCCCCEEEEEEETTCCEEEEEECCCT-----------------TTHHHHHH---HHHH-
T ss_pred CEEEEEEEEEecCccccccccCCCcEEEEEEEECCCCEEEecccCCC-----------------CChHHHHH---HHHH-
Confidence 7899999999976 568899999999999976 66555421 12234443 4566
Q ss_pred HHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEe
Q psy12655 73 IAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNV 152 (299)
Q Consensus 73 i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nv 152 (299)
++|.|+ |.|+.++..+++.|..++.......+ .+++.|+++|++.+.|+..++|||++|+ |.. +-|+|+.+
T Consensus 70 l~p~l~--G~d~~~~~~i~~~l~~~~~~~~g~~~-~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~~--~~~vp~~~- 140 (391)
T 2qgy_A 70 LFREIS--NIPNLSIKSFYNKISLLSDGHRGLDF-SSATSAIEIALWDISGKLKNLPLNSLLT---KSP--KPNVPIYA- 140 (391)
T ss_dssp HHHHHT--TCTTCCHHHHHHHHHHHHTTCCCHHH-HHHHHHHHHHHHHHHHHHHTSBHHHHHC---SSC--CSEEEEEE-
T ss_pred HHHHhc--CCChhHHHHHHHHHHhhhhhccCchH-HHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCc--CCCcceEE-
Confidence 999998 79999999999999875532111223 7899999999999999999999999998 643 45778777
Q ss_pred ecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHH
Q psy12655 153 INGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIE 232 (299)
Q Consensus 153 inGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~ 232 (299)
||+.|+.. +.++.. .+.++..+ .|.....+ -.|+ ++.+..++.+...-+
T Consensus 141 -~g~~~~~~---------------~~~~~~-------~~a~~~~~--~Gf~~vKi--k~g~----~~~~~~~e~v~avR~ 189 (391)
T 2qgy_A 141 -TCWSDLKK---------------DTNDYL-------RQIEKFYG--KKYGGIKI--YPML----DSLSISIQFVEKVRE 189 (391)
T ss_dssp -ECCCSSCC---------------CHHHHH-------HHHHHHHH--TTCSCEEE--CCCC----SSHHHHHHHHHHHHH
T ss_pred -ecccCCCC---------------CHHHHH-------HHHHHHHH--cCCCEEEE--ccCC----ChHHHHHHHHHHHHH
Confidence 67665311 222211 12223222 13211111 0111 224677777765555
Q ss_pred HcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 233 KAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 233 ~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+| .++.|.+|+- + .+|.+|.+++... +++|+|.+||+|+.
T Consensus 190 a~G--~d~~l~vDan-------~---------------~~~~~~a~~~~~~-l~~~~i~~iEqP~~ 230 (391)
T 2qgy_A 190 IVG--DELPLMLDLA-------V---------------PEDLDQTKSFLKE-VSSFNPYWIEEPVD 230 (391)
T ss_dssp HHC--SSSCEEEECC-------C---------------CSCHHHHHHHHHH-HGGGCCSEEECSSC
T ss_pred HhC--CCCEEEEEcC-------C---------------CCCHHHHHHHHHH-HHhcCCCeEeCCCC
Confidence 566 3678888871 1 2456888888766 67899999999985
No 22
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=99.68 E-value=1.6e-15 Score=145.14 Aligned_cols=206 Identities=17% Similarity=0.178 Sum_probs=137.8
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -.|+| .++|.|+|.|+ |.. .|-++++ ..++.
T Consensus 6 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~v~V~v~td-G~~G~Ge~~~~------------------------~~~~~ 60 (372)
T 3cyj_A 6 PRVERLEVSAYTVPTDYPESDGTLQWDSTTMILVEAHGG-GRKGLGYTYGD------------------------VSVGR 60 (372)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEET-TEEEEEEEESC------------------------THHHH
T ss_pred CEEeEEEEEEEeccCCCcccCcccccccccEEEEEEEeC-CcEEEEeccCc------------------------HHHHH
Confidence 67888887655 23444 45789999999 876 6666530 24566
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
.+++.++|.|+ |.++.++..+++.|.+. +++.+ +.++.||+.|+++|++.+.|+..|+|||++|+ |.. -+
T Consensus 61 ~i~~~l~~~l~--g~d~~~~~~i~~~l~~~~~~~~~-~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~~---~~ 131 (372)
T 3cyj_A 61 FVESKLAGVAE--GSDALSPPAVWARMQAAIRNAGR-PGVGAMAVSAVDIALWDLKARLLGLPLADALP---RFH---AE 131 (372)
T ss_dssp HHHHHTHHHHT--TSBTTCHHHHHHHHHHHTTTTCS-SBHHHHHHHHHHHHHHHHHHHHTTCBHHHHSC---CCC---SS
T ss_pred HHHHHHHHHHc--CCCcccHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHhhhHcCCcHHHHhC---CCC---CC
Confidence 78888999998 78999999999998764 77766 56678999999999999999999999999998 642 35
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRL 226 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~l 226 (299)
+|..+. +|.|. .+.|| .++++.++..+-|+.+| ..+|+ +++...+.++.
T Consensus 132 vp~~~~--~g~~~---~~~~~---------~~~~a~~~~~~G~~~~K-----------iKvG~------~~~~d~~~v~a 180 (372)
T 3cyj_A 132 VPVYGS--GGFTS---YPLRR---------LQEQLGGWAAAGIPRVK-----------MKVGR------EPEKDPERVRA 180 (372)
T ss_dssp EEEEEE--CCCTT---SCHHH---------HHHHHHHHHHTTCCEEE-----------EECCS------SGGGHHHHHHH
T ss_pred ceEEEE--cCCCC---CCHHH---------HHHHHHHHHHcCCCEEE-----------EcCCC------CHHHHHHHHHH
Confidence 666665 34332 12222 12222222211121111 12332 23333444444
Q ss_pred HHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcC-CeeEeecCCCC
Q psy12655 227 IVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEY-PIVSIEDPMLR 299 (299)
Q Consensus 227 l~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~y-PIvsiEDp~~e 299 (299)
+++++ | +++.|.+|+ ++. +|.+|.++++.. +++| +|.+||||+.+
T Consensus 181 vr~a~---g--~~~~l~vDa-------N~~---------------~~~~~a~~~~~~-l~~~~~i~~iEqP~~~ 226 (372)
T 3cyj_A 181 AREAI---G--ESVELMVDA-------NGA---------------YTRKQALYWAGA-FAREAGISYLEEPVSS 226 (372)
T ss_dssp HHHHH---C--TTSEEEEEC-------TTC---------------SCHHHHHHHHHH-HHHHHCCCEEECSSCT
T ss_pred HHHHh---C--CCCeEEEEC-------CCC---------------CCHHHHHHHHHH-HHhhcCCcEEECCCCc
Confidence 44443 5 478999997 122 456888998876 6889 99999999963
No 23
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=99.65 E-value=4.9e-16 Score=149.06 Aligned_cols=196 Identities=15% Similarity=0.134 Sum_probs=136.2
Q ss_pred CeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccch---------
Q psy12655 17 NPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQ--------- 87 (299)
Q Consensus 17 ~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ--------- 87 (299)
+|+|.|+| |++|.. |--|+..++ .|.|+++..++..++ .+.|.|+ |.++.+|
T Consensus 30 ~~~v~V~v-td~G~~----------G~GE~~~~~-----~~~~e~~~~~~~~l~-~~~~~l~--g~d~~~~~~~~~~~~~ 90 (377)
T 2pge_A 30 KPTWFVRL-DIDGHG----------GQGEVSLIP-----GLSLDPEEQIGRELD-LLARRLR--AEEPIRLRQFLAERGG 90 (377)
T ss_dssp ECEEEEEE-EETTEE----------EEEEEECCT-----TTCSSCHHHHHHHHH-HHHHHHH--HSCCHHHHHHHHHTSS
T ss_pred cceEEEEE-EcCCCE----------EEEEeccCC-----CCCcCCHHHHHHHHH-HHHHHHh--CCCccchhhhhhcccc
Confidence 78999999 988864 223333332 477888999999999 5899999 5677554
Q ss_pred ---HHHHHHHHhhcCCCCc-----ccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCC
Q psy12655 88 ---KEIDEFMIKLDGTENK-----SKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHA 159 (299)
Q Consensus 88 ---~~ID~~L~~lDgT~nk-----s~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha 159 (299)
..+++.|.++|++.++ ...+.|++.|+++|++.+.|+..|+|||++|+ |. ...+|++. .+++|
T Consensus 91 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~aid~Al~Dl~ak~~g~Pl~~llG---g~-~~~vp~~~--~i~~~--- 161 (377)
T 2pge_A 91 ADFSDYRSVLTDIAGILDSWQVSTDGRFPALRFALEMALLDLLSGGRQEWFASDFT---RG-EKRIPVNG--LIWMG--- 161 (377)
T ss_dssp CTTSCHHHHHHHHHHHHHHTTSSTTSSCHHHHHHHHHHHHHHHHTSSSCSSCSTTT---TT-SCCEEBCE--EECCC---
T ss_pred ccHHHHHHhhhhhhhhhhhcccccccccHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CC-CCeEEEeE--EecCC---
Confidence 6788888777765432 34678999999999999999999999999998 65 34566665 35443
Q ss_pred CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccc
Q psy12655 160 GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYT 237 (299)
Q Consensus 160 ~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~ 237 (299)
+.++.+ ..+++.+.+ |. +-..+|+ .++++.++.+..+.+.+|+
T Consensus 162 -----------------~~e~~~-------~~a~~~~~~--G~~~~K~Kvg~--------~~~~~d~~~v~avr~~~g~- 206 (377)
T 2pge_A 162 -----------------EAAFMQ-------EQIEAKLAE--GYGCLKLKIGA--------IDFDKECALLAGIRESFSP- 206 (377)
T ss_dssp -----------------CHHHHH-------HHHHHHHHT--TCSEEEEEC-----------CHHHHHHHHHHHHHHSCT-
T ss_pred -----------------CHHHHH-------HHHHHHHHH--hhhhheeecCC--------CChHHHHHHHHHHHHHcCC-
Confidence 122221 122222221 21 1112342 2579999999999998875
Q ss_pred cceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 238 GKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 238 ~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+++.|.+|+ ++.| |.+|.++++ +.+++|+|.+||||+.
T Consensus 207 ~~~~l~vDa-------N~~~---------------~~~~a~~~~-~~l~~~~i~~iEqP~~ 244 (377)
T 2pge_A 207 QQLEIRVDA-------NGAF---------------SPANAPQRL-KRLSQFHLHSIEQPIR 244 (377)
T ss_dssp TTCEEEEEC-------TTBB---------------CTTTHHHHH-HHHHTTCCSEEECCBC
T ss_pred CCceEEEEC-------CCCC---------------CHHHHHHHH-HHHhcCCCcEEEccCC
Confidence 479999997 2334 336777876 7788999999999995
No 24
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=99.64 E-value=1.4e-15 Score=146.33 Aligned_cols=122 Identities=18% Similarity=0.185 Sum_probs=100.1
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -.|+| .++|.|+|.|++|.. .|-+++.. . ..|.|+++..+++
T Consensus 20 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v~td~G~~G~GE~~~~~-----------~---~~~~~e~~~~~~~ 85 (386)
T 1wue_A 20 MNIQSIETYQVRLPLKTPFVTSYGRLEEKAFDLFVITDEQGNQGFGELVAFE-----------Q---PDYVQETLVTERF 85 (386)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCCS-----------S---TTSSSCCHHHHHH
T ss_pred CEEEEEEEEEEecccCCCccccceEEecCcEEEEEEEECCCCEEEEEeecCC-----------C---CcccCCcHHHHHH
Confidence 78999988766 34555 478999999999875 66655421 1 2588999999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.|++.++|.|+ |.++.++..+++.|..++| +.+|+.|+++|++.+.|+..|+|||++|+ | ....+|+
T Consensus 86 ~i~~~l~p~l~--G~d~~~~~~l~~~l~~~~g-------~~~A~~aid~AlwDl~~k~~g~Pl~~llG---g-~~~~v~~ 152 (386)
T 1wue_A 86 IIQQHLIPLLL--TEAIEQPQEVSTIFEEVKG-------HWMGKAALETAIWDLYAKRQQKSLTEFFG---P-TRRKIPV 152 (386)
T ss_dssp HHHHTHHHHHT--TSCCCSTHHHHHHGGGSCS-------CHHHHHHHHHHHHHHHHHHTTSBGGGGSS---S-CCSEEEC
T ss_pred HHHHHHHHHHc--CCCccCHHHHHHHHHHccC-------chHHHHHHHHHHHHHHHHHhCCcHHHHhC---C-CCCeeEe
Confidence 99999999998 7899999999999977654 46899999999999999999999999998 6 3446777
Q ss_pred ce
Q psy12655 148 PA 149 (299)
Q Consensus 148 P~ 149 (299)
+.
T Consensus 153 ~~ 154 (386)
T 1wue_A 153 GI 154 (386)
T ss_dssp CE
T ss_pred eE
Confidence 65
No 25
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=99.64 E-value=9.3e-15 Score=139.92 Aligned_cols=214 Identities=16% Similarity=0.153 Sum_probs=143.0
Q ss_pred CceeeEEEeEEe-----------CC-CC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHH
Q psy12655 1 MPISKIHARQIF-----------DS-RG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVT 63 (299)
Q Consensus 1 ~~I~~v~ar~il-----------Ds-rG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~ 63 (299)
|+|++|+.+.+= .| +| .+++-|+|.|++|.. .|-++ | + .
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~-~--------------~---------~ 56 (382)
T 1rvk_A 1 MIITDVEVRVFRTTTRRHSDSAGHAHPGPAHQVEQAMLTVRTEDGQEGHSFTA-P--------------E---------I 56 (382)
T ss_dssp CBEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEETTSCEEEEEEC-G--------------G---------G
T ss_pred CeEeEEEEEEEecCCCCcccccccccccccccceEEEEEEEECCCCEEEEEec-C--------------c---------h
Confidence 789999887651 33 44 467899999999875 65554 1 0 0
Q ss_pred HHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCc-ccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q psy12655 64 KAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENK-SKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSN 142 (299)
Q Consensus 64 ~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nk-s~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~ 142 (299)
.+...|++.++|.|+ |.|+.++..|++.|.+ +|.++ +.++.+++.|+++|++.+.|+..|+|||++|+ |.
T Consensus 57 ~~~~~i~~~l~~~l~--g~d~~~~~~~~~~l~~--~~~~~g~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~-- 127 (382)
T 1rvk_A 57 VRPHVIEKFVKKVLI--GEDHRDRERLWQDLAH--WQRGSAAQLTDRTLAVVDCALWDLAGRSLGQPVYKLIG---GY-- 127 (382)
T ss_dssp GCHHHHHHTHHHHHT--TSBTTCHHHHHHHHHH--HHTTTTTCSCHHHHHHHHHHHHHHHHHHHTCBHHHHHC---CS--
T ss_pred HHHHHHHHHHHHHHc--CCChHHHHHHHHHHHH--hhhcccchHHHHHHHHHHHHHHHHhHhHhCCCHHHHhC---CC--
Confidence 145667778999998 7899999999999854 22222 34577999999999999999999999999998 64
Q ss_pred cccccceEEeec-CCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCC-CCCcCCCCC
Q psy12655 143 IILPVPAFNVIN-GGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGD-EGGFAPNIL 218 (299)
Q Consensus 143 ~~lP~P~~nvin-GG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgd-eGgfap~~~ 218 (299)
.-++|+.+.+. |+.|+++.. +.++..+ +.++..+. |. .-..+|. .+++. .
T Consensus 128 -~~~vp~~~~~~~g~~~~~~~~-------------~~e~~~~-------~a~~~~~~--Gf~~iKik~g~~~~~~~---~ 181 (382)
T 1rvk_A 128 -RDKVLAYGSIMCGDELEGGLA-------------TPEDYGR-------FAETLVKR--GYKGIKLHTWMPPVSWA---P 181 (382)
T ss_dssp -CSEEEEEEEECCCCCCTTTTS-------------SHHHHHH-------HHHHHHHH--TCSEEEEECCCTTSTTC---C
T ss_pred -CCcceecEEeccCccccccCC-------------CHHHHHH-------HHHHHHHC--CCCEEEEcCCcCccccc---c
Confidence 45677787666 888865322 2222211 12222221 21 0011222 13333 3
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+..++.+...-+.+| .++.|.+|+. +. +|.+|.+++.. .+++|+|.+||+|+.
T Consensus 182 ~~~~~~e~v~avr~a~g--~d~~l~vDan-------~~---------------~~~~~a~~~~~-~l~~~~i~~iE~P~~ 236 (382)
T 1rvk_A 182 DVKMDLKACAAVREAVG--PDIRLMIDAF-------HW---------------YSRTDALALGR-GLEKLGFDWIEEPMD 236 (382)
T ss_dssp CHHHHHHHHHHHHHHHC--TTSEEEEECC-------TT---------------CCHHHHHHHHH-HHHTTTCSEEECCSC
T ss_pred chHHHHHHHHHHHHHhC--CCCeEEEECC-------CC---------------CCHHHHHHHHH-HHHhcCCCEEeCCCC
Confidence 56667776655444456 4688889971 22 45688888865 678899999999986
No 26
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=99.64 E-value=8.9e-15 Score=139.69 Aligned_cols=207 Identities=18% Similarity=0.209 Sum_probs=144.2
Q ss_pred CceeeEEEeEEe---------CCCC-----CeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQIF---------DSRG-----NPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~il---------DsrG-----~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|+.+.+- .|+| .++|.|+|.|++|.. |-.|+..+ + ..|.|.++..+.
T Consensus 4 MkI~~i~~~~~~~pl~~~p~~~s~~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~--~--~~~~~~~~~~~~ 69 (371)
T 2ps2_A 4 LKIARIDVFQVDLPYSGGVYYLSAGREYRSFDATIVRITTDTGIE----------GWGESTPF--G--SNYIASHPRGVR 69 (371)
T ss_dssp CCEEEEEEEEEEECBTTSCCCCC-------EEEEEEEEEETTSCE----------EEEEECCS--T--TTSSSCCHHHHH
T ss_pred CEEEEEEEEEEecccCCCCeeecccceeccCceEEEEEEECCCCE----------EEEEEecC--C--cccCCCCHHHHH
Confidence 679999988663 1344 367999999998854 33343333 1 258888999999
Q ss_pred HHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 67 GFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
..|++ ++|.|+ |.++.++..+++.|.... +.+.+++.|+++|++.+.|+..|+|||++|+ |.. .-+
T Consensus 70 ~~i~~-l~~~l~--g~d~~~~~~~~~~l~~~~------~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~--~~~ 135 (371)
T 2ps2_A 70 AGIAT-MAPSLI--GLDPRRVDRINDAMDDAL------LGHEDAKTAIDVACWDIFGKSVGLPVCELLG---GRT--NTR 135 (371)
T ss_dssp HHHHH-HHHHHT--TSCTTCHHHHHHHHHHHC------SSCHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCC--SSC
T ss_pred HHHHH-HHHHHC--CCCcccHHHHHHHHHHHh------cccHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC--CCc
Confidence 99997 999998 789999999999997642 2357999999999999999999999999998 643 336
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL 224 (299)
+|+.+.++++ +.++. ..+.++..+ .|... ..+|+ +.+..+
T Consensus 136 vp~~~~~~~~--------------------~~~~~-------~~~a~~~~~--~Gf~~iKik~g~---------~~~~~~ 177 (371)
T 2ps2_A 136 LPLISSIYVG--------------------EPEDM-------RARVAKYRA--KGYKGQSVKISG---------EPVTDA 177 (371)
T ss_dssp EEBEEEECSC--------------------CHHHH-------HHHHHHHHT--TTCCEEEEECCS---------CHHHHH
T ss_pred eEEEEEeCCC--------------------CHHHH-------HHHHHHHHH--hChheEEeecCC---------CHHHHH
Confidence 7778877653 12221 122233322 13111 12332 356667
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+- +. +|.+|.++++..|+++|+| +||||+.
T Consensus 178 e~v~avr~a~g--~~~~l~vDan-------~~---------------~~~~~a~~~~~~l~~~~~i-~iE~P~~ 226 (371)
T 2ps2_A 178 KRITAALANQQ--PDEFFIVDAN-------GK---------------LSVETALRLLRLLPHGLDF-ALEAPCA 226 (371)
T ss_dssp HHHHHHTTTCC--TTCEEEEECT-------TB---------------CCHHHHHHHHHHSCTTCCC-EEECCBS
T ss_pred HHHHHHHHhcC--CCCEEEEECC-------CC---------------cCHHHHHHHHHHHHhhcCC-cCcCCcC
Confidence 66654444455 4688899961 22 4568999999888799999 9999984
No 27
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=99.62 E-value=6.8e-15 Score=141.91 Aligned_cols=208 Identities=22% Similarity=0.304 Sum_probs=139.6
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF 68 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~ 68 (299)
|+|++|..+.+ -.|+| ++++.|+|.|++|.. |-.|+..+++ .|.|.++..++..
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~~~----~~~~~~~~~~~~~ 68 (397)
T 2qde_A 3 LKITKVEVIPISTPMKRAQLMRGATLARIDGVLLKLHSDEGLV----------GIADAGDTSS----WYRGETQDSITSM 68 (397)
T ss_dssp CCEEEEEEEEEEECCCC-----------EEEEEEEEEETTSCE----------EEEECCCCCT----TTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEeeeccCCeEeccceEeeCceEEEEEEECCCCE----------EEEEEecccC----ccCCCCHHHHHHH
Confidence 78999998876 23444 679999999998853 4445544443 4788899999999
Q ss_pred HHHhHHH-HHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 69 INNDIAP-ALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 69 in~~i~p-~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|++.++| .|+ |.|+.++..+++.|. ++. +. +.+++.|+++|++.+.|+..|+|||++|+ |... -|+
T Consensus 69 i~~~l~~~~l~--G~d~~~~~~l~~~l~---~~~-~~--~~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~~~--~~v 135 (397)
T 2qde_A 69 ICDFFAPKVLL--GEDPTKIEKIVGRMD---ILT-RD--NNQAKATVDFALHDLVGKRFGVPVYQLLG---GKTI--ERI 135 (397)
T ss_dssp HHHTHHHHTTT--TCCTTCHHHHHHHHH---HHC-SS--CHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSC--SSE
T ss_pred HHHhhhhHhhc--CCChHhHHHHHHHhh---hhh-cc--chhHHHHHHHHHHHHHHHHhCCcHHHHhC---CCCC--CCc
Confidence 9999999 898 789999999999883 332 22 57999999999999999999999999998 6432 366
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL~ 225 (299)
|+.+.++. .+.++.. .+.++.++. |... ..+| .+.++.++
T Consensus 136 p~~~~~g~--------------------~~~e~~~-------~~a~~~~~~--Gf~~vKik~g---------~~~~~~~e 177 (397)
T 2qde_A 136 PLGLVLGA--------------------GEPEAVA-------EEALAVLRE--GFHFVKLKAG---------GPLKADIA 177 (397)
T ss_dssp EBCEECCC--------------------SCHHHHH-------HHHHHHHHH--TCSCEEEECC---------SCHHHHHH
T ss_pred ceEEECCC--------------------CCHHHHH-------HHHHHHHHh--hhhheeeccc---------CCHHHHHH
Confidence 66665521 1122111 122222221 3111 1223 14456666
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| .++.|.+|+ ++. +|.+|.+++.. .+++|+|.+||+|+.
T Consensus 178 ~v~avR~a~g--~d~~l~vDa-------n~~---------------~~~~~a~~~~~-~l~~~~i~~iEqP~~ 225 (397)
T 2qde_A 178 MVAEVRRAVG--DDVDLFIDI-------NGA---------------WTYDQALTTIR-ALEKYNLSKIEQPLP 225 (397)
T ss_dssp HHHHHHHHHC--TTSCEEEEC-------TTC---------------CCHHHHHHHHH-HHGGGCCSCEECCSC
T ss_pred HHHHHHHhhC--CCCEEEEEC-------CCC---------------CCHHHHHHHHH-HHHhCCCCEEECCCC
Confidence 6533333335 367888996 122 45688888755 678899999999986
No 28
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=99.62 E-value=2.8e-15 Score=144.63 Aligned_cols=203 Identities=20% Similarity=0.301 Sum_probs=140.0
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -.|+| .++|.|+|.|++|.. .|-++++. ...|.|.++..+++
T Consensus 20 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v~td~G~~G~GE~~~~~--------------~~~~~~e~~~~~~~ 85 (393)
T 1wuf_A 20 MYFQKARLIHAELPLLAPFKTSYGELKSKDFYIIELINEEGIHGYGELEAFP--------------LPDYTEETLSSAIL 85 (393)
T ss_dssp EECCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSSCEEEEEECCCS--------------STTSSSCCHHHHHH
T ss_pred CEEEEEEEEEEeeeccCCeEecceeEecCcEEEEEEEECCCCEEEEEeecCC--------------CCcccCCCHHHHHH
Confidence 67888888766 34555 368999999999875 66555421 12588889999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.|++.++|.|+ |.++.++..+++.|..++| +.+|+.|+++|++.+.|+..|+|||++|+ | ....+|+
T Consensus 86 ~i~~~l~p~l~--G~d~~~~~~l~~~l~~~~g-------~~~a~~aid~AlwDl~gk~~g~Pl~~lLG---g-~~~~v~~ 152 (393)
T 1wuf_A 86 IIKEQLLPLLA--QRKIRKPEEIQELFSWIQG-------NEMAKAAVELAVWDAFAKMEKRSLAKMIG---A-TKESIKV 152 (393)
T ss_dssp HHHHTTHHHHH--HCEESSTTHHHHHHTTSCS-------CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---C-CCSEEEB
T ss_pred HHHHHHHHHHc--CCCccCHHHHHHHHHHccC-------chHHHHHHHHHHHHHHHHHhCCcHHHHhC---C-CCCccee
Confidence 99999999999 6899999999999977654 57899999999999999999999999998 6 3446777
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL~ 225 (299)
+. .++.+ .+.++.+ .++++.+.+ |... ..+| | ++.++
T Consensus 153 ~~--~~g~~-------------------~~~e~~~-------~~a~~~~~~--G~~~~KiKvg------~-----~~d~~ 191 (393)
T 1wuf_A 153 GV--SIGLQ-------------------QNVETLL-------QLVNQYVDQ--GYERVKLKIA------P-----NKDIQ 191 (393)
T ss_dssp CE--EECCC-------------------SCHHHHH-------HHHHHHHHH--TCCEEEEECB------T-----TBSHH
T ss_pred eE--EeCCC-------------------CCHHHHH-------HHHHHHHHH--hhHhheeccC------h-----HHHHH
Confidence 65 22111 1222221 122222221 2101 1122 2 23345
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+ +||+++ + +++.|.+|+ ++.| |.+|. ++ .+.+++|+|.+||||+.
T Consensus 192 ~v-~avr~a-~-~~~~l~vDa-------N~~~---------------~~~~a-~~-~~~l~~~~i~~iEqP~~ 237 (393)
T 1wuf_A 192 FV-EAVRKS-F-PKLSLMADA-------NSAY---------------NREDF-LL-LKELDQYDLEMIEQPFG 237 (393)
T ss_dssp HH-HHHHTT-C-TTSEEEEEC-------TTCC---------------CGGGH-HH-HHTTGGGTCSEEECCSC
T ss_pred HH-HHHHHH-c-CCCEEEEEC-------CCCC---------------CHHHH-HH-HHHHHhCCCeEEECCCC
Confidence 53 566665 3 589999997 2333 33565 54 47788999999999986
No 29
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=99.61 E-value=9.8e-16 Score=147.79 Aligned_cols=205 Identities=13% Similarity=0.151 Sum_probs=138.1
Q ss_pred CceeeEEEeEEe--------CC--CC-----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHH
Q psy12655 1 MPISKIHARQIF--------DS--RG-----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTK 64 (299)
Q Consensus 1 ~~I~~v~ar~il--------Ds--rG-----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~ 64 (299)
|+|++|..+.+= .| ++ +++|-|+|.|+ |.. .|.++ |
T Consensus 12 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~V~v~td-G~~G~GE~~-g-------------------------- 63 (392)
T 3p3b_A 12 WKVEKIEFAKLTGERARSAGANGRIGVHGKSCTVDIARITID-GQTGYGSSI-H-------------------------- 63 (392)
T ss_dssp CBEEEEEEEEEEEEEEEEECBCSSSCCCEEEEEEEEEEEEET-TEEEEEECC-S--------------------------
T ss_pred CeEEEEEEEEEeccCCCcccccccccccCCCCcEEEEEEEEC-CCEEEEecc-c--------------------------
Confidence 789988887651 22 33 78899999999 865 55544 1
Q ss_pred HHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhC----C
Q psy12655 65 AVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAG----N 140 (299)
Q Consensus 65 Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g----~ 140 (299)
.|+ .++|.|+ |.++.++..+. +.++.+++.|+++|++.+.|+..|+|||++|+ | .
T Consensus 64 ---~i~-~l~p~l~--G~d~~~~~~~~------------~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~~~ 122 (392)
T 3p3b_A 64 ---MTP-EWAEDVI--GRRLLDLFDDR------------GRLREAYRLQLEYPVLDWLGQRQGKPVYDLVS---GAHLET 122 (392)
T ss_dssp ---CCH-HHHHTTT--TCBGGGGBCTT------------SCBCGGGHHHHHHHHHHHHHHHHTCBHHHHHC---------
T ss_pred ---HHH-HHHHHhc--CCCHHHHHHHH------------hHHHHHHHHHHHHHHHHHHHHHcCCcHHHHhc---Cccccc
Confidence 355 5889998 78998887664 24678999999999999999999999999998 5 3
Q ss_pred C-ccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCC
Q psy12655 141 S-NIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILD 219 (299)
Q Consensus 141 ~-~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~ 219 (299)
. ...+|+..-....|+.+..+.+++||.| ..+.++..+.-|...-..+|++|+|.|+.++
T Consensus 123 ~~~~~vp~~~s~~~~~~~~~~~~~~~~e~~-------------------~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~ 183 (392)
T 3p3b_A 123 GASLVVPCYDTSLYFDDLHLADERAAVALM-------------------QEEAMQGYAKGQRHFKIKVGRGGRHMPLWEG 183 (392)
T ss_dssp --CEEEEEEEEEECBTTTTCCSHHHHHHHH-------------------HHHHHHHHHTTCCCEEEECCHHHHTSCHHHH
T ss_pred cccCCcceeEeecccCCCCcccccchHHHH-------------------HHHHHHHHHhCCCEEEECcCcCcccCCcccc
Confidence 2 2345543211444444444444443332 1222333322111112246777888876667
Q ss_pred hHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 220 NKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 220 ~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.++.++.+...-+.+|. ++.|.+|+ ++. +|.+|.++++.. +++|+|.+||+|+.
T Consensus 184 ~~~~~e~v~avR~~~g~--d~~l~vDa-------n~~---------------~~~~~ai~~~~~-l~~~~i~~iE~P~~ 237 (392)
T 3p3b_A 184 TKRDIAIVRGISEVAGP--AGKIMIDA-------NNA---------------YNLNLTKEVLAA-LSDVNLYWLEEAFH 237 (392)
T ss_dssp HHHHHHHHHHHHHHHCT--TCCEEEEC-------TTC---------------CCHHHHHHHHHH-TTTSCEEEEECSSS
T ss_pred HHHHHHHHHHHHHHhCC--CCeEEEEC-------CCC---------------CCHHHHHHHHHH-HHhcCCCEEecCCc
Confidence 78888888877777773 68888897 122 456888888776 68899999999985
No 30
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=99.61 E-value=1.8e-14 Score=137.33 Aligned_cols=206 Identities=21% Similarity=0.287 Sum_probs=142.7
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -.|+| .++|.|+|.|++|.. .|-++. + ..|.|+++..++.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G~~G~GE~~~-----------~-----~~~~~~~~~~~~~ 64 (369)
T 2p8b_A 1 MKITAIHLYAIRLPLRNPFVISYGSYSDMPSIIVKMETDEGIIGYGEGVA-----------D-----DHVTGESWESTFH 64 (369)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECC-----------C-----HHHHSCCHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEecceeEEeeeEEEEEEEECCCCEEEEEecC-----------C-----CCcCCCCHHHHHH
Confidence 78999988765 34555 378999999999865 554433 1 1467888999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.|++.++|.|+ |.++.++.++++.|.... +.+.+++.|+++|++.+.|+..|+|||++|+ |.....+|+
T Consensus 65 ~i~~~l~~~l~--g~d~~~~~~~~~~l~~~~------~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~v~~ 133 (369)
T 2p8b_A 65 TLKHTLTPALI--GQNPMNIEKIHDMMDNTI------YGVPTAKAAIDIACFDIMGKKLNQPVYQLIG---GRYHEEFPV 133 (369)
T ss_dssp HHHHTHHHHHT--TCCTTCHHHHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHTTSBGGGGTT---CCCCSCEEC
T ss_pred HHHHHHHHHHc--CCCcccHHHHHHHHHHHh------cCChHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCceee
Confidence 99998999998 789999999999997765 2356999999999999999999999999998 653344554
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
+ +.++++ +.++.. .+.++..+. |. .-..+|+ +.+..++
T Consensus 134 ~--~~i~~~--------------------~~~~~~-------~~a~~~~~~--Gf~~iKik~g~---------~~~~~~e 173 (369)
T 2p8b_A 134 T--HVLSIA--------------------DPENMA-------EEAASMIQK--GYQSFKMKVGT---------NVKEDVK 173 (369)
T ss_dssp C--EEECSC--------------------CHHHHH-------HHHHHHHHT--TCCEEEEECCS---------CHHHHHH
T ss_pred e--EEecCC--------------------ChHHHH-------HHHHHHHHc--CcCEEEEEeCC---------CHHHHHH
Confidence 3 444433 222211 222232221 31 1112332 4566677
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHH-HHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLT-ALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~eli-d~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| +++.|.+|+ ++.| |.+|.+ ++.. .+++|+|.+||||+.
T Consensus 174 ~v~avr~a~g--~~~~l~vDa-------n~~~---------------~~~~a~~~~~~-~l~~~~i~~iEqP~~ 222 (369)
T 2p8b_A 174 RIEAVRERVG--NDIAIRVDV-------NQGW---------------KNSANTLTALR-SLGHLNIDWIEQPVI 222 (369)
T ss_dssp HHHHHHHHHC--TTSEEEEEC-------TTTT---------------BSHHHHHHHHH-TSTTSCCSCEECCBC
T ss_pred HHHHHHHHhC--CCCeEEEEC-------CCCC---------------CHHHHHHHHHH-HHHhCCCcEEECCCC
Confidence 6665555556 367888996 2333 346777 7765 478899999999985
No 31
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=99.61 E-value=7.2e-14 Score=134.51 Aligned_cols=215 Identities=18% Similarity=0.194 Sum_probs=142.0
Q ss_pred CceeeEEEeEE-e-----CCCC----CeeEEEEEEEC---CCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQI-F-----DSRG----NPTVEVDLTTE---LGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~i-l-----DsrG----~pTvevev~~~---~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|+-..+ + +|+| .+++-|+|.|+ +|.. .|-+++| +.+.++ .
T Consensus 6 mkI~~i~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~~~~G~~G~GE~~~~------------------~~~~~~---~ 64 (392)
T 1tzz_A 6 VRIVDVREITKPISSPIRNAYIDFTKMTTSLVAVVTDVVREGKRVVGYGFNS------------------NGRYGQ---G 64 (392)
T ss_dssp CCEEEEEEEEEECCC---------CCCEEEEEEEEEEEECSSSEEEEEEECC------------------TTSCCC---H
T ss_pred cEEeEEEEEEecCCCcccccccccCcceEEEEEEEECCCCCCCEEEEEecCC------------------CchHHH---H
Confidence 67888883333 1 2322 47899999999 8876 6666542 112233 4
Q ss_pred HHHHHhHHHHHhcCCCCc----------cchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHh
Q psy12655 67 GFINNDIAPALLKESFEV----------TQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLAD 136 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~----------~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~ 136 (299)
..|++.++|.|+ |.++ .++..|++.|...+.+.+++ ++.+|+.|+++|++.+.|+..|+|||++|++
T Consensus 65 ~~i~~~l~~~l~--G~d~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~-~~~~a~~aid~AlwDl~ak~~g~Pl~~llG~ 141 (392)
T 1tzz_A 65 GLIRERFASRIL--EADPKKLLNEAGDNLDPDKVWAAMMINEKPGGHG-ERSVAVGTIDMAVWDAVAKIAGKPLFRLLAE 141 (392)
T ss_dssp HHHHHTHHHHHH--TSCGGGSBCTTSSSBCHHHHHHHHTTTCCSCCCS-HHHHHHHHHHHHHHHHHHHHHTSBHHHHHHH
T ss_pred HHHHHHHHHHHc--CCCchhhhcccccccCHHHHHHHHHHhccccCcc-HHHHHHHHHHHHHHHHHHHHcCCcHHHHcCC
Confidence 456667999999 7899 99999999998888777766 7789999999999999999999999999985
Q ss_pred hhCCCccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcC
Q psy12655 137 LAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFA 214 (299)
Q Consensus 137 l~g~~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfa 214 (299)
.++.. ..-++|+.++ +|+.|++ .+.++ +..++++.++ .|... ..+|+
T Consensus 142 ~~~g~-~~~~v~~y~~-~~~~~~~---------------~~~~~-------~~~~a~~~~~--~Gf~~iKik~g~----- 190 (392)
T 1tzz_A 142 RHGVK-ANPRVFVYAA-GGYYYPG---------------KGLSM-------LRGEMRGYLD--RGYNVVKMKIGG----- 190 (392)
T ss_dssp HTTSC-CCCEEEEEEE-CCCC-------------------CHHH-------HHHHHHHHHT--TTCSEEEEECSS-----
T ss_pred ccCCC-cCCCeeEEEe-CCcccCC---------------CCHHH-------HHHHHHHHHH--cCCCEEEEcCCC-----
Confidence 44321 2356777765 6666542 12222 2233344433 24211 12332
Q ss_pred CCCCChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEee
Q psy12655 215 PNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIE 294 (299)
Q Consensus 215 p~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiE 294 (299)
.++++.++.|...-+..| .++.|.+|+- +. +|.+|.++++.. +++|+|.+||
T Consensus 191 ---~~~~~~~e~v~avr~a~g--~~~~l~vDan-------~~---------------~~~~~a~~~~~~-l~~~~i~~iE 242 (392)
T 1tzz_A 191 ---APIEEDRMRIEAVLEEIG--KDAQLAVDAN-------GR---------------FNLETGIAYAKM-LRDYPLFWYE 242 (392)
T ss_dssp ---SCHHHHHHHHHHHHHHHT--TTCEEEEECT-------TC---------------CCHHHHHHHHHH-HTTSCCSEEE
T ss_pred ---CCHHHHHHHHHHHHHhcC--CCCeEEEECC-------CC---------------CCHHHHHHHHHH-HHHcCCCeec
Confidence 235666666655444455 4688889971 22 456888888766 6889999999
Q ss_pred cCCC
Q psy12655 295 DPML 298 (299)
Q Consensus 295 Dp~~ 298 (299)
||+.
T Consensus 243 qP~~ 246 (392)
T 1tzz_A 243 EVGD 246 (392)
T ss_dssp CCSC
T ss_pred CCCC
Confidence 9986
No 32
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=99.60 E-value=4.9e-14 Score=137.10 Aligned_cols=215 Identities=19% Similarity=0.320 Sum_probs=139.9
Q ss_pred ceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
+|++|+.+.+-++|.|.++ |+|.|++|.. .|.+..+ +.+.++ ...|++.|+|.|+
T Consensus 27 ~It~v~~~~v~~~~~~~vl-V~v~Td~G~~G~GEa~~~------------------~~~~~~---~~~i~~~lap~Li-- 82 (421)
T 4hnl_A 27 IITDVKSFAIKPDRHNLVV-VKVETNKGISGLGCSTFQ------------------FRPLAV---KTVVDEYLRPLLM-- 82 (421)
T ss_dssp BEEEEEEEEECSSSSCEEE-EEEEETTSCCEEEECCCT------------------TSHHHH---HHHHHHTHHHHHT--
T ss_pred eEEEEEEEEECCCCceEEE-EEEEECCCCEEEEeccCC------------------CCHHHH---HHHHHHHHHHHHC--
Confidence 5999999999999999887 9999999975 4433211 122223 3456788999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCC
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAG 160 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~ 160 (299)
|+|+.+++.|.+.|. .+.......++.+|+.|+.+|++-+.|+..|+|||++|+ |..... +|..+.+.++
T Consensus 83 G~dp~~ie~i~~~~~-~~~~~~~~~~~~~A~said~ALwDl~gK~~g~Pl~~LLG---G~~r~~--v~~y~~~~~~---- 152 (421)
T 4hnl_A 83 GRDANEIEDIWQVMN-VNSYWRNGPITNNAISGIDMALWDIKGQLADMPLYQLLG---GKARTA--IPAYTHAVAD---- 152 (421)
T ss_dssp TCBTTCHHHHHHHHH-HTTSSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSC--EEEEEEEEES----
T ss_pred CCChhhHHHHHHHHH-hhccccCCchHHHHHHHHHHHHHHHHHHHhCCCHHHhcC---CccCcc--cceecccCCC----
Confidence 799999999988774 344444445567899999999999999999999999998 654333 4445443321
Q ss_pred CcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhh-------hcCC----CCcccCCCCCcCCCCCCh----HHHHH
Q psy12655 161 NKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINT-------KFGL----DATAVGDEGGFAPNILDN----KEGLR 225 (299)
Q Consensus 161 ~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~-------k~G~----~~t~vgdeGgfap~~~~~----e~aL~ 225 (299)
+..+. ...+++.+.+ |.|. .....+++.++.....+. ++.++
T Consensus 153 ----------------~~~~~-------~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 209 (421)
T 4hnl_A 153 ----------------NLDDL-------YHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLK 209 (421)
T ss_dssp ----------------SHHHH-------HHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHH
T ss_pred ----------------CHHHH-------HHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHH
Confidence 22222 2333333332 1111 011223344444444333 44444
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| +++.|.+|+. ..+|.+|.+.+. +.+++|+|.+||||+.
T Consensus 210 ~v~avR~a~G--~~~~l~vDan----------------------~~~~~~~A~~~~-~~l~~~~i~~iEeP~~ 257 (421)
T 4hnl_A 210 MFAAIKEKYG--NQFQMLHDVH----------------------ERLHPNQAIQFA-KAAEPYQLFFLEDILP 257 (421)
T ss_dssp HHHHHHHHHT--TSSEEEEECT----------------------TCSCHHHHHHHH-HHHGGGCCSEEECCSC
T ss_pred HHHHHHHHhC--CCceEecccc----------------------ccCCHHHHHHHH-HHhhhhhhcccccCCc
Confidence 4444444444 5799999962 124567777664 5568999999999986
No 33
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=99.60 E-value=5.5e-14 Score=132.94 Aligned_cols=202 Identities=16% Similarity=0.164 Sum_probs=142.3
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -.|+| .++|.|+|.|++|.. .|-++. + ..|.|.++..++.
T Consensus 2 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~-----------~-----~~~~~e~~~~~~~ 65 (345)
T 2zad_A 2 SRIVNVKLSLKRYEYEKPFHITGSVSSESRNVEVEIVLESGVKGYGEASP-----------S-----FRVNGERVEALLA 65 (345)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECC-----------C-----HHHHCCCHHHHHH
T ss_pred CEEEEEEEEEEEeeccCCEEecCeeEeeceEEEEEEEECCCCEEEEEecC-----------C-----CCcCCCCHHHHHH
Confidence 68998888766 23444 478999999999875 554432 1 1467888999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.+++ ++|.|+ |.++.++..+++.| .. ...+.+++.|+++|++.+.|+..|+|||++|+ | ....+|+
T Consensus 66 ~i~~-l~~~l~--g~d~~~~~~~~~~l-~~------~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g-~~~~v~~ 131 (345)
T 2zad_A 66 IENA-VREMIT--GIDVRNYARIFEIT-DR------LFGFPSLKAAVQFATLDALSQELGTQVCYLLG---G-KRDEIET 131 (345)
T ss_dssp THHH-HHHHHT--TCBGGGHHHHHHHH-TT------CTTSHHHHHHHHHHHHHHHHHHHTSCHHHHTT---C-CCSEEEB
T ss_pred HHHH-HHHHhC--CCChhhHHHHHHHH-HH------hccchHHHHHHHHHHHHHHHHHcCCcHHHHhC---C-CCCceee
Confidence 9998 999998 78999999999988 22 13467999999999999999999999999998 7 3445666
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL~ 225 (299)
+. .++++ +.++.. .+.++..+. |... ..+|+ +.++.++
T Consensus 132 ~~--~~~~~--------------------~~~~~~-------~~a~~~~~~--Gf~~iKik~g~---------~~~~d~~ 171 (345)
T 2zad_A 132 DK--TVGID--------------------TVENRV-------KEAKKIFEE--GFRVIKIKVGE---------NLKEDIE 171 (345)
T ss_dssp CE--EECSC--------------------CHHHHH-------HHHHHHHHT--TCSEEEEECCS---------CHHHHHH
T ss_pred eE--EecCC--------------------CHHHHH-------HHHHHHHHc--CcCEEEEeecC---------CHHHHHH
Confidence 53 34332 222211 222332221 3111 12332 5778888
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCee--EeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIV--SIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIv--siEDp~~ 298 (299)
.+ +||+++| +++.|.+|+ ++. +|.+|.+++... +++|+|. +||+|+.
T Consensus 172 ~v-~avr~~g--~~~~l~vDa-------n~~---------------~~~~~a~~~~~~-l~~~~i~~~~iE~P~~ 220 (345)
T 2zad_A 172 AV-EEIAKVT--RGAKYIVDA-------NMG---------------YTQKEAVEFARA-VYQKGIDIAVYEQPVR 220 (345)
T ss_dssp HH-HHHHHHS--TTCEEEEEC-------TTC---------------SCHHHHHHHHHH-HHHTTCCCSEEECCSC
T ss_pred HH-HHHHhhC--CCCeEEEEC-------CCC---------------CCHHHHHHHHHH-HHhcCCCeeeeeCCCC
Confidence 86 7777775 578888996 122 456888887655 7889999 9999985
No 34
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=99.60 E-value=1.1e-13 Score=131.67 Aligned_cols=205 Identities=21% Similarity=0.267 Sum_probs=141.6
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+ -+|+|. ++|.|+|.|++|.. .|-++. + ..|.|.++..++.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~-----------~-----~~~~~~~~~~~~~ 64 (366)
T 1tkk_A 1 MKIIRIETSRIAVPLTKPFKTALRTVYTAESVIVRITYDSGAVGWGEAPP-----------T-----LVITGDSMDSIES 64 (366)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECC-----------C-----TTTTCCCHHHHHH
T ss_pred CEEEEEEEEEEEccccCCEEecCeeEEEeeEEEEEEEECCCCEEEEEecC-----------C-----CCcCCCCHHHHHH
Confidence 88999988765 346663 57999999999865 554433 1 1477888999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
.|++.++|.|+ |.++.++..+++.|... ++ +.+++.|+++|++.+.|+..|+|||++|+ | ....+|
T Consensus 65 ~l~~~l~~~l~--g~~~~~~~~~~~~l~~~~~~-------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g-~~~~v~ 131 (366)
T 1tkk_A 65 AIHHVLKPALL--GKSLAGYEAILHDIQHLLTG-------NMSAKAAVEMALYDGWAQMCGLPLYQMLG---G-YRDTLE 131 (366)
T ss_dssp HHHHTHHHHHT--TCBGGGHHHHHHHHHHSSSS-------CHHHHHHHHHHHHHHHHHHTTSBHHHHHT---C-CCSEEE
T ss_pred HHHHHHHHHHc--CCCcccHHHHHHHHHHHhcC-------CHHHHHHHHHHHHHHHHHHcCCCHHHHhC---C-CCCcee
Confidence 99998999998 78999999999988663 32 46899999999999999999999999998 6 344566
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL 224 (299)
++. .++++ +.++.. .+.++.++. |. +-..+|. .+.++.+
T Consensus 132 ~~~--~~~~~--------------------~~~~~~-------~~a~~~~~~--Gf~~iKik~g~--------~~~~~d~ 172 (366)
T 1tkk_A 132 TDY--TVSVN--------------------SPEEMA-------ADAENYLKQ--GFQTLKIKVGK--------DDIATDI 172 (366)
T ss_dssp BCE--EECSC--------------------CHHHHH-------HHHHHHHHH--TCCEEEEECCS--------SCHHHHH
T ss_pred eeE--EecCC--------------------CHHHHH-------HHHHHHHHc--CCCeEEEEeCC--------CCHHHHH
Confidence 542 33332 222211 122222221 21 1112332 1456666
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhc--CCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKE--YPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~--yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+- +. +|.+|.+++... +++ |+|.+||||+.
T Consensus 173 ~~v~avr~a~g--~~~~l~vDan-------~~---------------~~~~~a~~~~~~-l~~~~~~i~~iEqP~~ 223 (366)
T 1tkk_A 173 ARIQEIRKRVG--SAVKLRLDAN-------QG---------------WRPKEAVTAIRK-MEDAGLGIELVEQPVH 223 (366)
T ss_dssp HHHHHHHHHHC--SSSEEEEECT-------TC---------------SCHHHHHHHHHH-HHHTTCCEEEEECCSC
T ss_pred HHHHHHHHHhC--CCCeEEEECC-------CC---------------CCHHHHHHHHHH-HhhcCCCceEEECCCC
Confidence 66655545555 3688899961 22 456888888776 567 99999999985
No 35
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=99.59 E-value=1.4e-13 Score=131.45 Aligned_cols=209 Identities=18% Similarity=0.215 Sum_probs=138.9
Q ss_pred CceeeEEEeEE--------eCCCCCe-----eEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGNP-----TVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~p-----Tvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|+.+.+ -+|+|.- +|-|+|.|++|.. .|-+++. | .+...++
T Consensus 2 ~kI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~~V~v~td~G~~G~Ge~~~~---g-----------------~~~~~~~ 61 (371)
T 2ovl_A 2 SLIERVRTDLYRIPLPTRLTDSTHGAMMDFELITVRIEDSDGATGLGYTYTV---N-----------------HGGAAVA 61 (371)
T ss_dssp -CEEEEEEEEEEEEEEEEEBCTTTCCEEEEEEEEEEEEETTSCEEEEEEEEE---S-----------------SSHHHHH
T ss_pred CceEEEEEEEEeccCCCCCccccccccCcceEEEEEEEECCCCEEEEeecCC---C-----------------CchHHHH
Confidence 58999988776 3666643 7999999999976 6655431 1 0123456
Q ss_pred HHHHHhHHHHHhcCCCCccchHHHHHHHHh-hcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 67 GFINNDIAPALLKESFEVTQQKEIDEFMIK-LDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~-lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
..|++.++|.|+ |.|+.++..+++.|.. +.++.+ +.++.+|+.|+++|++.+.|+..|+|||++|+ |. +-
T Consensus 62 ~~i~~~l~~~l~--G~d~~~~~~~~~~l~~~~~~~~~-~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~---~~ 132 (371)
T 2ovl_A 62 TMVDKDLRGCLL--GADAEQIEKIWQSMWWRLHYAGR-GGHATSAISAVDIALWDLKGIRARTPLWKLFG---GY---DP 132 (371)
T ss_dssp HHHHHTTHHHHT--TSCTTCHHHHHHHHHHHTCTTCS-STHHHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CC---CS
T ss_pred HHHHHHHHHHhc--CCCcccHHHHHHHHHHHhhhcCC-chHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC---CC
Confidence 667888999998 7899999999999866 455443 34557899999999999999999999999998 64 35
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~a 223 (299)
++|+.+. ||.|. .+.|+ .. .+.++..+. |. .-..+|. .++++.
T Consensus 133 ~v~~y~~--~~~~~---~~~e~-------------~~-------~~a~~~~~~--Gf~~iKik~g~--------~~~~~~ 177 (371)
T 2ovl_A 133 VVPVYAG--GIDLE---LPVAD-------------LK-------TQADRFLAG--GFRAIKMKVGR--------PDLKED 177 (371)
T ss_dssp EEEEEEE--CCBTT---SCHHH-------------HH-------HHHHHHHHT--TCSCEEEECCC--------SSHHHH
T ss_pred CeeEEEe--CCCcC---CCHHH-------------HH-------HHHHHHHHc--CCCEEEECCCC--------CCHHHH
Confidence 6777764 44431 12222 11 122222221 31 1112332 145666
Q ss_pred HHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 224 LRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.+...-+..| .++.|.+|+. + .+|.+|.+++... +++|+|.+||+|+.
T Consensus 178 ~e~v~avr~a~G--~d~~l~vDan-------~---------------~~~~~~a~~~~~~-l~~~~i~~iEqP~~ 227 (371)
T 2ovl_A 178 VDRVSALREHLG--DSFPLMVDAN-------M---------------KWTVDGAIRAARA-LAPFDLHWIEEPTI 227 (371)
T ss_dssp HHHHHHHHHHHC--TTSCEEEECT-------T---------------CSCHHHHHHHHHH-HGGGCCSEEECCSC
T ss_pred HHHHHHHHHHhC--CCCeEEEECC-------C---------------CCCHHHHHHHHHH-HHhcCCCEEECCCC
Confidence 666655444455 3677888861 1 2456888888765 68899999999985
No 36
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=99.58 E-value=5e-14 Score=134.89 Aligned_cols=206 Identities=17% Similarity=0.220 Sum_probs=138.8
Q ss_pred CceeeEEEeEE--------eCCCCC------eeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN------PTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~------pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|+.+.+ -.|+|. ++|.|+|.|++|.. |-.|+..+ + ..|.|.++..+.
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~--~--~~~~~~~~~~~~ 68 (378)
T 2qdd_A 3 LRITRLTVFHLDLPLAKPYWLSGGRLKFDRLDSTYLRIDTDEGVT----------GWGEGCPW--G--HSYLPAHGPGLR 68 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECCC--CEEEEEEEEEEEEEETTSCE----------EEEEECCS--T--TTSSSCCHHHHH
T ss_pred CEEEEEEEEEEeccccCceecccCcccccccceEEEEEEECCCCE----------EEEEEecC--C--CCcCCCCHHHHH
Confidence 78999998865 456775 68999999999854 33344333 1 258889999999
Q ss_pred HHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 67 GFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
..|+ .++|.|+ |.|+.++..+++.|... . +. +.+++.|+++|++.+.|+..|+|||++|+ |.... +
T Consensus 69 ~~l~-~l~~~l~--g~d~~~~~~~~~~l~~~---~-~g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~--~ 134 (378)
T 2qdd_A 69 AGIA-TLAPHLL--GLDPRSLDHVNRVMDLQ---L-PG--HSYVKSPIDMACWDILGQVAGLPLWQLLG---GEAAT--P 134 (378)
T ss_dssp HHHH-HHHHHHT--TCCTTCHHHHHHHHHHH---S-CS--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CSSCC--C
T ss_pred HHHH-HHHHHHC--CCCccCHHHHHHHHHHh---h-cc--chHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCC--C
Confidence 9999 7999998 78999999999988332 1 12 57999999999999999999999999998 64323 3
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCC--CcccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLD--ATAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~--~t~vgdeGgfap~~~~~e~aL 224 (299)
+|+.+.++.+ +.++..+ +.++..+. |.. -..+|. | +.++.+
T Consensus 135 v~~~~~~~~~--------------------~~e~~~~-------~a~~~~~~--Gf~~iKik~g~-----~---~~~~~~ 177 (378)
T 2qdd_A 135 VPINSSISTG--------------------TPDQMLG-------LIAEAAAQ--GYRTHSAKIGG-----S---DPAQDI 177 (378)
T ss_dssp EEBEEEECSC--------------------CHHHHHH-------HHHHHHHH--TCCEEEEECCS-----S---CHHHHH
T ss_pred CceEEEecCC--------------------CHHHHHH-------HHHHHHHH--hhhheeecCCC-----C---ChHHHH
Confidence 5555555211 2222111 22222221 310 012221 1 456677
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+- +. +|.+|.++++..| + |+| +||||+.
T Consensus 178 e~v~avr~a~g--~~~~l~vDan-------~~---------------~~~~~a~~~~~~l-~-~~i-~iEqP~~ 224 (378)
T 2qdd_A 178 ARIEAISAGLP--DGHRVTFDVN-------RA---------------WTPAIAVEVLNSV-R-ARD-WIEQPCQ 224 (378)
T ss_dssp HHHHHHHHSCC--TTCEEEEECT-------TC---------------CCHHHHHHHHTSC-C-CCC-EEECCSS
T ss_pred HHHHHHHHHhC--CCCEEEEeCC-------CC---------------CCHHHHHHHHHHh-C-CCc-EEEcCCC
Confidence 76665544455 3678899961 22 4568999999888 5 999 9999984
No 37
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=99.57 E-value=2.3e-14 Score=139.16 Aligned_cols=211 Identities=20% Similarity=0.249 Sum_probs=136.5
Q ss_pred eeEEEEEEECCCce-EEEe-ecCCC-CcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHH
Q psy12655 18 PTVEVDLTTELGLF-RAAV-PSGAS-TGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFM 94 (299)
Q Consensus 18 pTvevev~~~~g~~-ra~~-psGaS-~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L 94 (299)
++|.|+|.|++|.. .|-+ |.+.| +|.+|+.+. ...++..|++.++|.|+ |.++.++..|++.|
T Consensus 51 ~~v~V~v~td~G~~G~GE~~~~~~~g~g~~e~~~~------------~~~~~~~i~~~l~p~L~--G~d~~~~~~i~~~l 116 (413)
T 1kcz_A 51 ESISVLLVLEDGQVAHGDCAAVQYSGAGGRDPLFL------------AKDFIPVIEKEIAPKLI--GREITNFKPMAEEF 116 (413)
T ss_dssp CEEEEEEEETTSCEEEEEECCCTTTTSTTSCSCCC------------HHHHHHHHHHHTHHHHT--TCBCCCHHHHHHHH
T ss_pred cEEEEEEEECCCCEEEEEEccccccccCccccccc------------HHHHHHHHHHHHHHHHc--CCChhhHHHHHHHH
Confidence 57999999999987 6644 45544 666655442 35677788888999998 78999999999988
Q ss_pred HhhcCCCCc-ccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCCcccceeEEEEec
Q psy12655 95 IKLDGTENK-SKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPT 173 (299)
Q Consensus 95 ~~lDgT~nk-s~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ 173 (299)
.. +.++ ..++.|++.|+++|++.+.|+..++|||++|+..++....+.|+|+.+ ++|- . ++
T Consensus 117 ~~---~~~~g~~~~~~a~~aid~AlwDl~ak~~g~Pl~~lLGg~~~~~~~~~~vp~~~--~~g~---~-------~~--- 178 (413)
T 1kcz_A 117 DK---MTVNGNRLHTAIRYGITQAILDAVAKTRKVTMAEVIRDEYNPGAEINAVPVFA--QSGD---D-------RY--- 178 (413)
T ss_dssp HH---CEETTEECCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHSTTCCCCCCCEEC--CCTT---C-------TT---
T ss_pred Hh---cccCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhcccccCcCccCCeeeeE--ecCc---c-------cc---
Confidence 43 3222 246789999999999999999999999999983211112356888887 3331 0 00
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhhcC-C--CCcccCCCCCcCCCCCChHH----HHHHHHHHH-HHcccccceEEEee
Q psy12655 174 GASSFSEAMKIGSEVYHHLKKVINTKFG-L--DATAVGDEGGFAPNILDNKE----GLRLIVEAI-EKAGYTGKVEIGMD 245 (299)
Q Consensus 174 ga~s~~eal~~~~ev~~~l~~~l~~k~G-~--~~t~vgdeGgfap~~~~~e~----aL~ll~eAi-~~ag~~~~i~ialD 245 (299)
.+. .+...+.++.+. .| . +-..+|+.+ ...++ .++. .+|| +..|+ ++.|.+|
T Consensus 179 --~~~-------~~~~~~a~~~~~--~G~~~~~KiKvG~~~------~~~~~~~~~d~~~-v~avR~~~G~--~~~l~vD 238 (413)
T 1kcz_A 179 --DNV-------DKMIIKEADVLP--HALINNVEEKLGLKG------EKLLEYVKWLRDR-IIKLRVREDY--APIFHID 238 (413)
T ss_dssp --HHH-------HHHHHTTCSEEE--ECCCCCCCCCCCTTS------HHHHHHHHHHHHH-HHHHCSSTTC--CCEEEEE
T ss_pred --CCH-------HHHHHHHHHHHH--hcchhheeeccCCCc------cchhhHHHHHHHH-HHHHHHhcCC--CceEEEe
Confidence 011 111222222222 12 1 111223210 00223 2333 3445 44454 6999999
Q ss_pred cccc--ccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhc-CCee-EeecCCC
Q psy12655 246 VAAS--EFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKE-YPIV-SIEDPML 298 (299)
Q Consensus 246 ~AAs--e~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~-yPIv-siEDp~~ 298 (299)
+..+ +||. +|.+|.++++..|.+. +||. +||||+.
T Consensus 239 aN~~~~~~~~------------------~~~~~a~~~~~~L~~~~~~i~~~iEqP~~ 277 (413)
T 1kcz_A 239 VYGTIGAAFD------------------VDIKAMADYIQTLAEAAKPFHLRIEGPMD 277 (413)
T ss_dssp CTTHHHHHTT------------------TCHHHHHHHHHHHHHHHTTSCEEEECSBC
T ss_pred cCCCcccccC------------------CCHHHHHHHHHHHHhhcCCcceEEecCCC
Confidence 9888 7761 3568999999999887 7977 9999983
No 38
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=99.57 E-value=4.2e-13 Score=127.93 Aligned_cols=208 Identities=15% Similarity=0.196 Sum_probs=141.4
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|..+.+ -.|+| .+++-|+|.| +|.. .|-+ |.| + ..|.|.++..++
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~t-~G~~G~GE~~~~~--------------~-~~~~~e~~~~~~ 64 (370)
T 1nu5_A 1 MKIEAISTTIVDVPTRRPLQMSFTTVHKQSYVIVQVKA-GGLVGIGEGGSVG--------------G-PTWGSESAETIK 64 (370)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEE-TTEEEEEEECCST--------------T-TTTSSCCHHHHH
T ss_pred CEEEEEEEEEEEccccCCEEecceEEEeceeEEEEEEE-CCEEEEEEeccCC--------------C-CcccCCCHHHHH
Confidence 78999988765 12343 4578899999 8865 5544 332 1 258888899999
Q ss_pred HHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 67 GFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
..|++.++|.|+ |.|+.++..+++.|.... +.+.+++.|+++|++.+.|+..|+|||++|+ |.....+|
T Consensus 65 ~~i~~~l~~~l~--G~d~~~~~~~~~~l~~~~------~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~~v~ 133 (370)
T 1nu5_A 65 VIIDNYLAPLLV--GKDASNLSQARVLMDRAV------TGNLSAKAAIDIALHDLKARALNLSIADLIG---GTMRTSIP 133 (370)
T ss_dssp HHHHHTHHHHHT--TSBTTCHHHHHHHHHHHC------SSCHHHHHHHHHHHHHHHHHHTTCBHHHHHT---CCSCSEEE
T ss_pred HHHHHhhHHHHc--CCCcccHHHHHHHHHHHh------cCCHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCcCCceE
Confidence 999999999998 789999999999997764 2357899999999999999999999999998 75444566
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL 224 (299)
++ +.+++| +.++.+ .+.++.++ ..|... ..+|. .++++.+
T Consensus 134 ~~--~~~~~~--------------------~~e~~~-------~~a~~~~~-~~Gf~~iKik~g~--------~~~~~~~ 175 (370)
T 1nu5_A 134 IA--WTLASG--------------------DTARDI-------DSALEMIE-TRRHNRFKVKLGA--------RTPAQDL 175 (370)
T ss_dssp BC--EEECSS--------------------CHHHHH-------HHHHHHHH-TTSCSEEEEECSS--------SCHHHHH
T ss_pred ee--EEecCC--------------------CHHHHH-------HHHHHHHH-hCCccEEEEecCC--------CChHHHH
Confidence 65 455433 112211 12233332 013111 12232 1345555
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+. +. +|.+|.+++.. .+++|+|.+||||+.
T Consensus 176 e~v~avr~a~g--~~~~l~vDan-------~~---------------~~~~~a~~~~~-~l~~~~i~~iEqP~~ 224 (370)
T 1nu5_A 176 EHIRSIVKAVG--DRASVRVDVN-------QG---------------WDEQTASIWIP-RLEEAGVELVEQPVP 224 (370)
T ss_dssp HHHHHHHHHHG--GGCEEEEECT-------TC---------------CCHHHHHHHHH-HHHHHTCCEEECCSC
T ss_pred HHHHHHHHhcC--CCCEEEEECC-------CC---------------CCHHHHHHHHH-HHHhcCcceEeCCCC
Confidence 55554444445 3678999961 22 45688888765 678899999999985
No 39
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=99.55 E-value=9.9e-14 Score=133.39 Aligned_cols=188 Identities=15% Similarity=0.134 Sum_probs=122.2
Q ss_pred eEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhh
Q psy12655 19 TVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKL 97 (299)
Q Consensus 19 Tvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l 97 (299)
+|.|+|.|++|.. .|-+++. | . + ...+..|++.++|.|+ |.|+.++..|++.|.++
T Consensus 52 ~~~V~v~td~G~~G~GE~~~~---~----------~-----~---~~~~~~i~~~l~~~l~--G~d~~~~~~i~~~l~~~ 108 (388)
T 2nql_A 52 SVLVRMTTEAGTVGWGETYGI---V----------A-----P---GAVAALINDLLAGFVI--GRDASDPSAVYDDLYDM 108 (388)
T ss_dssp EEEEEEEETTCCEEEEEEECS---S----------C-----H---HHHHHHHHHTHHHHHT--TCCSSSHHHHHHHHHHH
T ss_pred EEEEEEEECCCCEEEEEecCC---C----------C-----c---HHHHHHHHHHHHHHhc--CCCcccHHHHHHHHHhh
Confidence 7999999999986 7776653 1 0 1 1345667778999998 78999999999999654
Q ss_pred cCCCCcc--cCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCCCCcccceeEEEEecCC
Q psy12655 98 DGTENKS--KFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGA 175 (299)
Q Consensus 98 DgT~nks--~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga 175 (299)
+|.+++ .++.|++.|+++|++.+.|+..|+|||++|+ |. ...+ |..+.+ |.|. +.|+|
T Consensus 109 -~~~~~~~~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llG---g~-~~~v--p~~~~~--g~~~----~~e~~------- 168 (388)
T 2nql_A 109 -MRVRGYTGGFYVDALAALDIALWDIAGQEAGKSIRDLLG---GG-VDSF--PAYVSG--LPER----TLKAR------- 168 (388)
T ss_dssp -HGGGTCSSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CC-CSEE--EEEEEC--CCCS----SHHHH-------
T ss_pred -cccccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCce--EeeEEe--CCCC----CHHHH-------
Confidence 444444 2357999999999999999999999999998 65 2334 445443 2211 22322
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHHHHHHHHHHcccccceEEEeecccccccc
Q psy12655 176 SSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFK 253 (299)
Q Consensus 176 ~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~ 253 (299)
. .+.++..+. |. .-..+|+ ++ .+. ++.+...-+.+| .++.|.+|+
T Consensus 169 ------~-------~~a~~~~~~--Gf~~vKik~g~-----~~---~~~-~e~v~avr~a~g--~d~~l~vDa------- 215 (388)
T 2nql_A 169 ------G-------ELAKYWQDR--GFNAFKFATPV-----AD---DGP-AAEIANLRQVLG--PQAKIAADM------- 215 (388)
T ss_dssp ------H-------HHHHHHHHT--TCCEEEEEGGG-----CT---TCH-HHHHHHHHHHHC--TTSEEEEEC-------
T ss_pred ------H-------HHHHHHHHh--CCCEEEEeCCC-----CC---hHH-HHHHHHHHHHhC--CCCEEEEEC-------
Confidence 1 122222221 31 0112332 23 334 444444434445 368888986
Q ss_pred CCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 254 EGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 254 ~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++. +|.+|.++++.. +++|+|.+||+|+.
T Consensus 216 n~~---------------~~~~~a~~~~~~-l~~~~i~~iEqP~~ 244 (388)
T 2nql_A 216 HWN---------------QTPERALELIAE-MQPFDPWFAEAPVW 244 (388)
T ss_dssp CSC---------------SCHHHHHHHHHH-HGGGCCSCEECCSC
T ss_pred CCC---------------CCHHHHHHHHHH-HhhcCCCEEECCCC
Confidence 122 456888888765 78899999999986
No 40
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=99.55 E-value=6.1e-14 Score=133.61 Aligned_cols=120 Identities=18% Similarity=0.175 Sum_probs=95.7
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+= .|+| .+++-|+|.|++| . .|-++.. . . ..|.|.++..++.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G-~G~GE~~~~-----------~--~-~~~~~e~~~~~~~ 65 (368)
T 1sjd_A 1 MKLSGVELRRVQMPLVAPFRTSFGTQSVRELLLLRAVTPAG-EGWGECVTM-----------A--G-PLYSSEYNDGAEH 65 (368)
T ss_dssp CCCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSC-EEEEECCCB-----------S--S-SSSSSCBHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEeeeeEEecccEEEEEEEeCCC-EEEEEecCC-----------C--C-CccccCcHHHHHH
Confidence 789988877552 3455 5789999999887 5 5555432 1 1 2588889999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.|++.++|.|+ |.++.++.++++.|..++| +.+|+.|+++|++.+.|+..|+|||++|+ |. ...+|+
T Consensus 66 ~i~~~l~~~l~--g~d~~~~~~l~~~~~~~~g-------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~-~~~~~~ 132 (368)
T 1sjd_A 66 VLRHYLIPALL--AAEDITAAKVTPLLAKFKG-------HRMAKGALEMAVLDAELRAHERSFAAELG---SV-RDSVPC 132 (368)
T ss_dssp HHHHTHHHHHH--HSSSCCHHHHHHHHTTSCS-------CHHHHHHHHHHHHHHHHHHTTCBHHHHHT---CC-CSEEEB
T ss_pred HHHHHHHHHHc--CCCcCCHHHHHHHHHHhcC-------CHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCCccc
Confidence 99999999999 6899999999998866654 56899999999999999999999999998 64 345666
Q ss_pred c
Q psy12655 148 P 148 (299)
Q Consensus 148 P 148 (299)
+
T Consensus 133 ~ 133 (368)
T 1sjd_A 133 G 133 (368)
T ss_dssp E
T ss_pred e
Confidence 5
No 41
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=99.54 E-value=1e-13 Score=133.62 Aligned_cols=209 Identities=19% Similarity=0.217 Sum_probs=134.7
Q ss_pred CceeeEEEeEEe--------CCCC----------CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCcc
Q psy12655 1 MPISKIHARQIF--------DSRG----------NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKG 61 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----------~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkg 61 (299)
|+|++|..+.+- .|+| +++|-|+|.|++|.. .|-+|++. +.+.+
T Consensus 13 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~~~-----------------~~~~~ 75 (393)
T 2og9_A 13 DRITWVRISSCYLPLATPISDAKVLTGRQKPMTEIAILFAEIETAGGHQGLGFSYSKR-----------------AGGPG 75 (393)
T ss_dssp CCEEEEEEEEEEEECSSCCC------------CEEEEEEEEEEETTSCEEEEEEEEES-----------------TTHHH
T ss_pred CeEeEEEEEEEeccCCCccccccccccccCCcCCccEEEEEEEECCCCEEEEEecCcc-----------------cchHH
Confidence 689999988772 3443 478999999999976 77666531 22223
Q ss_pred HHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcC-CCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC
Q psy12655 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDG-TENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN 140 (299)
Q Consensus 62 v~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDg-T~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~ 140 (299)
+..+ ++ .++|.|+ |.++.++..+++.|...+. +.+ +.++.+|+.|+++|++.+.|+..|+|||++|+ |.
T Consensus 76 ~~~~---i~-~l~~~l~--G~d~~~~~~i~~~l~~~~~~~~~-~~~~~~A~~aid~AlwDl~gk~~g~Pl~~llG---g~ 145 (393)
T 2og9_A 76 QFAH---AR-EIAPALI--GEDPSDIAKLWDKLCWAGASAGR-SGLSTQAIGAFDVALWDLKAKRAGLSLAKLLG---SY 145 (393)
T ss_dssp HHHH---HH-HHGGGGT--TSCTTCHHHHHHHHHHTTGGGCS-SSHHHHHHHHHHHHHHHHHHHHTTCBHHHHHC---CS
T ss_pred HHHH---HH-HHHHHHc--CCChhhHHHHHHHHHHhhhhcCC-chHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC
Confidence 4444 34 4899998 7899999999999987653 222 33556999999999999999999999999998 65
Q ss_pred CccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCC
Q psy12655 141 SNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNIL 218 (299)
Q Consensus 141 ~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~ 218 (299)
.-++|+.+.+ ||.|. .+.|+| . .+.++..+ .|... ..+|. .
T Consensus 146 ---~~~vp~y~~~-g~~~~---~~~e~~-------------~-------~~a~~~~~--~Gf~~vKik~g~--------~ 188 (393)
T 2og9_A 146 ---RDSVRCYNTS-GGFLH---TPIDQL-------------M-------VNASASIE--RGIGGIKLKVGQ--------P 188 (393)
T ss_dssp ---CSEEEEEBCT-TCCTT---SCHHHH-------------H-------HHHHHHHH--TTCCCEEEECCC--------S
T ss_pred ---CCceEEEEEC-CCcCC---CCHHHH-------------H-------HHHHHHHH--cCCCEEEEecCC--------C
Confidence 3567776655 33321 122222 1 12222222 13111 12221 1
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+..++.+...-+..| .++.|.+|+ ++. +|.+|.++++.. +++|+|.+||+|+.
T Consensus 189 ~~~~~~e~v~avR~avg--~d~~l~vDa-------n~~---------------~~~~~a~~~~~~-l~~~~i~~iE~P~~ 243 (393)
T 2og9_A 189 DGALDIARVTAVRKHLG--DAVPLMVDA-------NQQ---------------WDRPTAQRMCRI-FEPFNLVWIEEPLD 243 (393)
T ss_dssp CHHHHHHHHHHHHHHHC--TTSCEEEEC-------TTC---------------CCHHHHHHHHHH-HGGGCCSCEECCSC
T ss_pred CHHHHHHHHHHHHHHcC--CCCEEEEEC-------CCC---------------CCHHHHHHHHHH-HHhhCCCEEECCCC
Confidence 35666666633333335 367888885 122 456888888866 68899999999985
No 42
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=99.54 E-value=8.4e-14 Score=132.71 Aligned_cols=202 Identities=19% Similarity=0.269 Sum_probs=136.4
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+= .|+| .++|-|+|.| +|.. .|-+++. . . ..|.|.++..++.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~t-dG~~G~GE~~~~-----------~--~-~~~~~e~~~~~~~ 65 (369)
T 2zc8_A 1 MRIEAAELRILELPLKFRFETSFGVQTKRTILLLRLFG-EGLEGLGEGVME-----------R--L-PLYREETVAGARY 65 (369)
T ss_dssp CBCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEE-TTEEEEEECCCB-----------S--S-CSSSSCBHHHHHH
T ss_pred CEEEEEEEEEEeccccCCEEEeeEEEeeCcEEEEEEEE-CCeEEEEEeccC-----------C--C-CcccCCCHHHHHH
Confidence 789988887552 3455 5789999999 4765 5555432 1 1 2588899999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.+++.++|.|+ |.++.++.++++.|..++| +.+++.|+++|++.+.|+..|+|||++|+ |. ...+|+
T Consensus 66 ~i~~~l~~~l~--G~d~~~~~~l~~~~~~~~g-------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~-~~~~~~ 132 (369)
T 2zc8_A 66 LLEEVFLPRVL--GRDLPNPEALREALAPFRG-------NPMAKAVLEMAFFDLWAKALGRPLWQVLG---GV-RQAVEV 132 (369)
T ss_dssp HHHHTHHHHHT--TCBCSSHHHHHHHHTTSCS-------CHHHHHHHHHHHHHHHHHHTTSBHHHHHT---CC-CSEEEB
T ss_pred HHHHHHHHHHc--CCCcCCHHHHHHHHHHhcC-------ChHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCceec
Confidence 99999999998 7899999999998866654 56899999999999999999999999998 64 234665
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCc--ccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDAT--AVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t--~vgdeGgfap~~~~~e~aL~ 225 (299)
+ +++ |.| .+.++.. .+.++.++. |.... .++ | ++.++
T Consensus 133 ~-~~~---g~~-----------------~~~~~~~-------~~a~~~~~~--G~~~iKik~~------~-----~~d~~ 171 (369)
T 2zc8_A 133 G-VSL---GIQ-----------------PSVEDTL-------RVVERHLEE--GYRRIKLKIK------P-----GWDYE 171 (369)
T ss_dssp C-EEE---CCC-----------------SSHHHHH-------HHHHHHHHT--TCSCEEEECB------T-----TBSHH
T ss_pred e-EEe---cCC-----------------CCHHHHH-------HHHHHHHHh--hhheeeeecC------h-----hHHHH
Confidence 5 232 322 1222211 222333321 31111 121 2 34455
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+ +||+++ + +++.|.+|+ ++.| |.+| +++... +++|+|.+||||+.
T Consensus 172 ~v-~avr~a-~-~~~~l~vDa-------n~~~---------------~~~~-~~~~~~-l~~~~i~~iEqP~~ 217 (369)
T 2zc8_A 172 VL-KAVREA-F-PEATLTADA-------NSAY---------------SLAN-LAQLKR-LDELRLDYIEQPLA 217 (369)
T ss_dssp HH-HHHHHH-C-TTSCEEEEC-------TTCC---------------CGGG-HHHHHG-GGGGCCSCEECCSC
T ss_pred HH-HHHHHH-c-CCCeEEEec-------CCCC---------------CHHH-HHHHHH-HHhCCCcEEECCCC
Confidence 53 555555 3 578899997 2333 3466 776554 78899999999985
No 43
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=99.53 E-value=1.6e-13 Score=131.68 Aligned_cols=203 Identities=15% Similarity=0.191 Sum_probs=136.4
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -.|+| .++|.|+|.|++|.. .|-++ | + . .++ ++.
T Consensus 4 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~Ge~~-~---~----------~------~~~--~~~ 61 (384)
T 2pgw_A 4 VKISNVRVRPLVLPLKQPYHWSYGIRESFAVNLIEIEADDGTVGIGECT-V---A----------P------DQT--GTA 61 (384)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSCEEEEEEE-C---T----------T------CHH--HHH
T ss_pred CEEEEEEEEEEecccCccceeccceeeeceEEEEEEEECCCCEEEEccC-C---C----------c------hHH--HHH
Confidence 67999998866 35666 478999999999976 66655 1 1 0 022 677
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHH-HHhhcCCCCccc---C-CChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEF-MIKLDGTENKSK---F-GANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSN 142 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~-L~~lDgT~nks~---l-GaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~ 142 (299)
.|++.++|.|+ |.++.++..+++. |. +++.++++ . +.+|+.|+++|++.+.|+..|+|||++|+ |...
T Consensus 62 ~i~~~l~~~l~--g~d~~~~~~~~~~~l~--~~~~~~g~~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~ 134 (384)
T 2pgw_A 62 AILYRLAKHLV--GHSPHDVAPLIARIFH--QEYLGHGANIMRAANQIFSGIDMAMWDLQGKLAGLPVHQLLG---GAHR 134 (384)
T ss_dssp HHHHHHHGGGT--TSCGGGHHHHHHHHHH--HHTGGGTCCCHHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTT---CCSS
T ss_pred HHHHHHHHHHC--CCChhHHHHHHHHHHH--HHhhhcccccccccHHHHHHHHHHHHHHHHhHcCCCHHHHcC---CCCC
Confidence 78888999998 7899999999988 74 33334433 2 46899999999999999999999999998 6432
Q ss_pred cccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCCh
Q psy12655 143 IILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDN 220 (299)
Q Consensus 143 ~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~ 220 (299)
-++|+.+.++++ +.|+| ..+.++..+ .|... ..+| + +.
T Consensus 135 --~~v~~~~~~~~~-------~~e~~--------------------~~~a~~~~~--~Gf~~iKik~g---~------~~ 174 (384)
T 2pgw_A 135 --KAVGYFYFLQGE-------TAEEL--------------------ARDAAVGHA--QGERVFYLKVG---R------GE 174 (384)
T ss_dssp --SEEEBCEECCCS-------SHHHH--------------------HHHHHHHHH--TTCCEEEEECC---S------CH
T ss_pred --CceEEEEECCCC-------CHHHH--------------------HHHHHHHHH--cCCCEEEECcC---C------CH
Confidence 356666666431 12221 112222222 13111 1222 1 56
Q ss_pred HHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 221 KEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 221 e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+..++.+...-+.+| ++.|.+|+ ++. +|.+|.+++.. .+++|+|.+||+|+.
T Consensus 175 ~~~~e~v~avr~a~g---d~~l~vD~-------n~~---------------~~~~~a~~~~~-~l~~~~i~~iEqP~~ 226 (384)
T 2pgw_A 175 KLDLEITAAVRGEIG---DARLRLDA-------NEG---------------WSVHDAINMCR-KLEKYDIEFIEQPTV 226 (384)
T ss_dssp HHHHHHHHHHHTTST---TCEEEEEC-------TTC---------------CCHHHHHHHHH-HHGGGCCSEEECCSC
T ss_pred HHHHHHHHHHHHHcC---CcEEEEec-------CCC---------------CCHHHHHHHHH-HHHhcCCCEEeCCCC
Confidence 777777755555555 57788885 122 45678888755 788999999999985
No 44
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=99.53 E-value=3.1e-13 Score=130.02 Aligned_cols=207 Identities=16% Similarity=0.173 Sum_probs=132.8
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -+|+|. ++|-|+|.|++|.. .|-+++ +|. ..|. ...++.
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~---~g~-----------~~~~---~~~~~~ 65 (389)
T 2oz8_A 3 LSLSHFRITRFQFARDRVIGDSQVRADDVNVAALELVSESGEVGLGFIQT---LFN-----------PLPD---QQEIES 65 (389)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEEE---SSS-----------CCCC---HHHHHH
T ss_pred CEEEEEEEEEEEeccCCceecccceecccceEEEEEEECCCCEEEEEecc---CCC-----------cccc---HHHHHH
Confidence 78999988776 456663 57999999999976 665543 111 1222 245677
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcC--CCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDG--TENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDg--T~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
.|++.++|.|+ |.++.++ +..+++ +.++++++.+++.|+++|++.+.|+..|+|||++|+ |.. -
T Consensus 66 ~i~~~l~p~l~--G~d~~~~------~~~~~~~~~~~~~~l~~~a~~aid~AlwDl~~k~~g~Pl~~lLG---g~~---~ 131 (389)
T 2oz8_A 66 VFEHEVWPSLK--GNRAIAL------VHRVNRPRGGNQRAYSLPFHEAVQVALWDLAAKEAGLPLHVLLG---SRR---N 131 (389)
T ss_dssp HHHHHTHHHHT--TSCHHHH------TTCCCCCC------CCSCCHHHHHHHHHHHHHHHHTSBHHHHTT---CSC---S
T ss_pred HHHHHHHHHHc--CCCHHHH------HHHHhccCCCccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCC---C
Confidence 78888999998 7888776 455643 667788899999999999999999999999999998 642 3
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~a 223 (299)
++|+.+. +|.|. . +.++..+ +.++.++ .|. .-..+|+ .+.+..
T Consensus 132 ~vp~y~~--~~~~~---~-------------~~~~~~~-------~a~~~~~--~Gf~~vKik~g~--------~~~~~~ 176 (389)
T 2oz8_A 132 RVKAYAS--GLDFH---L-------------DDDAFVS-------LFSHAAS--IGYSAFKIKVGH--------RDFDRD 176 (389)
T ss_dssp EEEEEEE--CCBTT---C-------------CHHHHHH-------HHHHHHH--TTCCEEEEECCC--------SSHHHH
T ss_pred ceEEEEe--CCCcC---C-------------CHHHHHH-------HHHHHHH--hCCCEEEEccCC--------CCHHHH
Confidence 6677765 34331 1 2222211 2222222 131 0112332 245666
Q ss_pred HHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhc--CCeeEeecCCC
Q psy12655 224 LRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKE--YPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~--yPIvsiEDp~~ 298 (299)
++.+...-+..| .++.|.+|+- +. +|.+|.++++.. +++ |+|.+||+|+.
T Consensus 177 ~e~v~avR~a~G--~~~~l~vDan-------~~---------------~~~~~a~~~~~~-l~~~g~~i~~iEqP~~ 228 (389)
T 2oz8_A 177 LRRLELLKTCVP--AGSKVMIDPN-------EA---------------WTSKEALTKLVA-IREAGHDLLWVEDPIL 228 (389)
T ss_dssp HHHHHHHHTTSC--TTCEEEEECT-------TC---------------BCHHHHHHHHHH-HHHTTCCCSEEESCBC
T ss_pred HHHHHHHHHhhC--CCCeEEEECC-------CC---------------CCHHHHHHHHHH-HHhcCCCceEEeCCCC
Confidence 666654444445 4688889971 22 456888888866 567 99999999985
No 45
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=99.52 E-value=5.6e-14 Score=134.33 Aligned_cols=202 Identities=17% Similarity=0.255 Sum_probs=134.5
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+= .|+| .++|-|+|.| +|.. .|-+++. +. ..|.|.++..++.
T Consensus 8 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~t-dG~~G~GE~~~~-------------~~-~~~~~e~~~~~~~ 72 (375)
T 1r0m_A 8 FKIEAAEIVVARLPLKFRFETSFGVQTHKVVPLLILHG-EGVQGVAEGTME-------------AR-PMYREETIAGALD 72 (375)
T ss_dssp EECCEEEEEEEEEEBC----------CEEEEEEEEEEE-TTEEEEEECCCB-------------SS-SSSSSCBHHHHHH
T ss_pred cEEEEEEEEEEeeecCCCeEecceEEeeccEEEEEEEE-CCeEEEEEEecC-------------CC-CcccCCCHHHHHH
Confidence 578888887652 3445 5789999999 5865 6655432 01 2588899999999
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.|++.++|.|+ |.++.++..+++.|..++| +.+|+.|+++|++.+.|+..|+|||++|+ |. ...+|+
T Consensus 73 ~i~~~l~~~l~--g~d~~~~~~l~~~~~~~~g-------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~-~~~~~~ 139 (375)
T 1r0m_A 73 LLRGTFLPAIL--GQTFANPEAVSDALGSYRG-------NRMARAMVEMAAWDLWARTLGVPLGTLLG---GH-KEQVEV 139 (375)
T ss_dssp HHHHTHHHHHT--TCEESSHHHHHHTTTTSCS-------CHHHHHHHHHHHHHHHHHHHTCBHHHHHT---CC-CSEEEB
T ss_pred HHHHHHHHHHc--CCCcCCHHHHHHHHHHccC-------chHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCceee
Confidence 99999999998 7899999999988765543 56899999999999999999999999998 64 234666
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCc--ccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDAT--AVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t--~vgdeGgfap~~~~~e~aL~ 225 (299)
+ +++ |.| .+.++.. .+.++.++. |.... .++ | ++.++
T Consensus 140 ~-~~~---g~~-----------------~~~~~~~-------~~a~~~~~~--G~~~iKik~~------~-----~~d~~ 178 (375)
T 1r0m_A 140 G-VSL---GIQ-----------------ADEQATV-------DLVRRHVEQ--GYRRIKLKIK------P-----GWDVQ 178 (375)
T ss_dssp C-EEE---CCC-----------------SSHHHHH-------HHHHHHHHT--TCSCEEEECB------T-----TBSHH
T ss_pred e-EEe---cCC-----------------CCHHHHH-------HHHHHHHHh--cccEEEEecC------h-----HHHHH
Confidence 5 332 322 1222211 222333321 31111 121 2 33445
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+ +||+++ + +++.|.+|+ ++.| |.+| ++++.. +++|+|.+||||+.
T Consensus 179 ~v-~avr~a-~-~~~~l~vDa-------n~~~---------------~~~~-~~~~~~-l~~~~i~~iEqP~~ 224 (375)
T 1r0m_A 179 PV-RATREA-F-PDIRLTVDA-------NSAY---------------TLAD-AGRLRQ-LDEYDLTYIEQPLA 224 (375)
T ss_dssp HH-HHHHHH-C-TTSCEEEEC-------TTCC---------------CGGG-HHHHHT-TGGGCCSCEECCSC
T ss_pred HH-HHHHHH-c-CCCeEEEeC-------CCCC---------------CHHH-HHHHHH-HHhCCCcEEECCCC
Confidence 43 555555 3 688999996 2333 3457 887666 68899999999985
No 46
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=99.52 E-value=4.8e-13 Score=126.99 Aligned_cols=205 Identities=20% Similarity=0.224 Sum_probs=135.5
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -+|+|. ++|.|+|.|++|.. .|-+++. | |.++ .+..
T Consensus 4 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G~~G~Ge~~~~---~----------------~~~~-~~~~ 63 (359)
T 1mdl_A 4 VLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFAY---T----------------PVAL-KSLK 63 (359)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECS---S----------------GGGH-HHHH
T ss_pred CEEEEEEEEEEEcCCCCCccccccccccccEEEEEEEeCCCCEEEEEeecC---C----------------CchH-HHHH
Confidence 78999988766 356664 57899999999876 6655542 1 2234 6677
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCccc--CCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSK--FGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~--lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
.|++.++|.|+ |.|+.++..+ +.|.+. +.++++ ++.+++.|+++|++.+.|+..|+|||++|+ |. . -
T Consensus 64 ~i~~~l~~~l~--g~d~~~~~~~-~~l~~~--~~~~~~~~~~~~a~~aid~Al~Dl~~k~~g~Pl~~llG---g~-~--~ 132 (359)
T 1mdl_A 64 QLLDDMAAMIV--NEPLAPVSLE-AMLAKR--FCLAGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLG---AN-A--R 132 (359)
T ss_dssp HHHHHHHHHHT--TSBSCHHHHH-HHHHHH--TTTTCSSHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CC-C--C
T ss_pred HHHHHHHHHHC--CCCccchHHH-HHHHHH--HHhhccCchHHHHHHHHHHHHHHHhhhhcCCcHHHHhC---CC-C--C
Confidence 88888999998 7899999999 777654 334433 346899999999999999999999999998 65 2 2
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~a 223 (299)
++|..+. +|. .+.++.. .+.++..+. |... ..+|. .+++..
T Consensus 133 ~vp~~~~--~g~------------------~~~~~~~-------~~a~~~~~~--Gf~~iKik~g~--------~~~~~~ 175 (359)
T 1mdl_A 133 PVQAYDS--HSL------------------DGVKLAT-------ERAVTAAEL--GFRAVKTRIGY--------PALDQD 175 (359)
T ss_dssp CEEEEEE--CCS------------------CHHHHHH-------HHHHHHHHT--TCSEEEEECCC--------SSHHHH
T ss_pred Ceeeeee--cCC------------------CCHHHHH-------HHHHHHHHc--CCCEEEEecCC--------CCHHHH
Confidence 3455543 231 1122211 122222221 3111 12232 245666
Q ss_pred HHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 224 LRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.+...-+..| .++.|.+|+- +. +|.+|.++++.. +++|+|.+||+|+.
T Consensus 176 ~e~v~avr~a~g--~~~~l~vDan-------~~---------------~~~~~a~~~~~~-l~~~~i~~iE~P~~ 225 (359)
T 1mdl_A 176 LAVVRSIRQAVG--DDFGIMVDYN-------QS---------------LDVPAAIKRSQA-LQQEGVTWIEEPTL 225 (359)
T ss_dssp HHHHHHHHHHHC--SSSEEEEECT-------TC---------------SCHHHHHHHHHH-HHHHTCSCEECCSC
T ss_pred HHHHHHHHHHhC--CCCEEEEECC-------CC---------------CCHHHHHHHHHH-HHHhCCCeEECCCC
Confidence 666655445556 3688888861 22 456888888766 67899999999985
No 47
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=99.51 E-value=6e-13 Score=127.75 Aligned_cols=202 Identities=17% Similarity=0.219 Sum_probs=135.8
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+- .|+| +++|-|+|.|++|.. .|-++ | . -..+..
T Consensus 4 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~-g--------------~--------~~~~~~ 60 (382)
T 2gdq_A 4 VKIVRIETFPLFHRLEKPYGDANGFKRYRTCYLIRIITESGIDGWGECV-D--------------W--------LPALHV 60 (382)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEEC-S--------------C--------HHHHHH
T ss_pred CEEEEEEEEEEecccCcccccccceeccCcEEEEEEEECCCCEEEEeec-C--------------c--------hHHHHH
Confidence 789999887663 3455 578999999999875 66554 2 0 013566
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.|++.++|.|+ |.++.++..+++.|... +.+++.|+++|++.+.|+..|+|||++|+ |.. .-++
T Consensus 61 ~i~~~l~~~l~--G~d~~~~~~~~~~l~~~---------~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~--~~~v 124 (382)
T 2gdq_A 61 GFTKRIIPFLL--GKQAGSRLSLVRTIQKW---------HQRAASAVSMALTEIAAKAADCSVCELWG---GRY--REEI 124 (382)
T ss_dssp HHHHTHHHHHT--TSBTTCHHHHHHHHHHH---------CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CCS--CSEE
T ss_pred HHHHHHHHHhc--CCCcccHHHHHHHHHHH---------HhHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCC--CCce
Confidence 77888999998 78999999999998654 27899999999999999999999999998 642 2356
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL~ 225 (299)
|+.+.+ |+.| ++.+++ ++.. .+.++..+ .|... ..+|+ .+.++.++
T Consensus 125 p~~~~~-g~~~-~~~~~~-------------e~~~-------~~a~~~~~--~Gf~~vKik~g~--------~~~~~d~e 172 (382)
T 2gdq_A 125 PVYASF-QSYS-DSPQWI-------------SRSV-------SNVEAQLK--KGFEQIKVKIGG--------TSFKEDVR 172 (382)
T ss_dssp EEEEEC-CCBC-SSTTHH-------------HHHH-------HHHHHHHT--TTCCEEEEECSS--------SCHHHHHH
T ss_pred eEEEEe-cccC-CCcccH-------------HHHH-------HHHHHHHH--cCCCEEEEcCCC--------CCHHHHHH
Confidence 667655 4333 232332 1111 12222222 13111 12332 23566666
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcC-CeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEY-PIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~y-PIvsiEDp~~ 298 (299)
.+...-+..| .++.|.+|+- +. +|.+|.+++... +++| +|.+||+|+.
T Consensus 173 ~v~avR~a~G--~d~~l~vDan-------~~---------------~~~~~a~~~~~~-l~~~~~i~~iEqP~~ 221 (382)
T 2gdq_A 173 HINALQHTAG--SSITMILDAN-------QS---------------YDAAAAFKWERY-FSEWTNIGWLEEPLP 221 (382)
T ss_dssp HHHHHHHHHC--TTSEEEEECT-------TC---------------CCHHHHHTTHHH-HTTCSCEEEEECCSC
T ss_pred HHHHHHHhhC--CCCEEEEECC-------CC---------------CCHHHHHHHHHH-HhhccCCeEEECCCC
Confidence 6655444556 4688889961 22 456888888665 7889 8999999985
No 48
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=99.46 E-value=3e-12 Score=122.61 Aligned_cols=205 Identities=18% Similarity=0.166 Sum_probs=136.9
Q ss_pred CceeeEEEeEE---------eCCCCC-----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 1 MPISKIHARQI---------FDSRGN-----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 1 ~~I~~v~ar~i---------lDsrG~-----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
|+|++|+.+.+ -.|+|. ++|.|+|.|++|.. .|-++. + + ..|.|.++..+
T Consensus 3 mkI~~i~~~~~~~pl~~~p~~~s~~~~~~~~~~~~V~v~td~G~~G~GE~~~-----------~--~--~~~~~~~~~~~ 67 (379)
T 2rdx_A 3 LRITRIRLYKTDLPYVDGSYGWGAGNAITVARASVVVIDTDAGLQGCGEFTP-----------C--G--ENYMIAHSEGV 67 (379)
T ss_dssp CCEEEEEEEEEEEEBTTSCCEETTTEECSEEEEEEEEEEETTSCEEEEEEBC-----------S--S--TTSSSCCTTHH
T ss_pred CEEEEEEEEEEeeecCCCCcEecCceeecccceEEEEEEECCCCEEEEEeec-----------C--C--CCcCCCCHHHH
Confidence 78999998866 234553 67999999999865 444432 1 1 14777778888
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
...|+ .++|.|+ |.|+.++..+++.|... . +. +.+++.|+++|++.+.|+..|+|||++|+ |... -
T Consensus 68 ~~~i~-~l~~~l~--g~d~~~~~~~~~~l~~~---~-~g--~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~--~ 133 (379)
T 2rdx_A 68 DAFAR-LAAPQLL--GQDPRQVARMERLMDHL---V-QG--HGYAKAPFDAAFWDILGQATGQPVWMLLG---GKLC--D 133 (379)
T ss_dssp HHHHH-HHHHHHT--TSCTTCHHHHHHHHHHH---S-SS--CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---SCCC--S
T ss_pred HHHHH-HHHHHHc--CCChhhHHHHHHHHHHH---h-cc--cHHHHHHHHHHHHHHhHHHhCCCHHHHcC---CCCC--C
Confidence 88888 7999998 78999999999988322 1 11 56899999999999999999999999998 6432 2
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~a 223 (299)
++|+.+.++.+ +.| +. ..+.++..+. |. .-..+|. +.+..
T Consensus 134 ~v~~~~~~~~~-------~~~-------------~~-------~~~a~~~~~~--Gf~~iKik~g~---------~~~~~ 175 (379)
T 2rdx_A 134 GAPMYRVAPQR-------SEA-------------ET-------RAELARHRAA--GYRQFQIKVGA---------DWQSD 175 (379)
T ss_dssp SEEBCEECCCS-------CSH-------------HH-------HHHHHHHHHT--TCCEEEEECCS---------CHHHH
T ss_pred ceeEEEEecCC-------CHH-------------HH-------HHHHHHHHHc--CCCEEEEeccC---------CHHHH
Confidence 45555554110 111 11 1122222221 31 1112332 45667
Q ss_pred HHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 224 LRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.+...-+.+| .++.|.+|+ ++. +|.+|.+++... +++|+| +||+|+.
T Consensus 176 ~e~v~avr~a~g--~d~~l~vDa-------n~~---------------~~~~~a~~~~~~-l~~~~i-~iE~P~~ 224 (379)
T 2rdx_A 176 IDRIRACLPLLE--PGEKAMADA-------NQG---------------WRVDNAIRLARA-TRDLDY-ILEQPCR 224 (379)
T ss_dssp HHHHHHHGGGSC--TTCEEEEEC-------TTC---------------SCHHHHHHHHHH-TTTSCC-EEECCSS
T ss_pred HHHHHHHHHhcC--CCCEEEEEC-------CCC---------------CCHHHHHHHHHH-HHhCCe-EEeCCcC
Confidence 776665544555 468888885 122 456888887655 788999 9999984
No 49
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=99.44 E-value=1.2e-13 Score=133.34 Aligned_cols=210 Identities=11% Similarity=0.081 Sum_probs=126.8
Q ss_pred CceeeEEEeEEeC--------CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHH--HHHHHH
Q psy12655 1 MPISKIHARQIFD--------SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVT--KAVGFI 69 (299)
Q Consensus 1 ~~I~~v~ar~ilD--------srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~--~Av~~i 69 (299)
|+|++|..+.+-- |+ +++|.|+|.|+ |.. .|-+++.. |.+.++. .++..|
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~s~-~~~~~V~v~td-G~~G~GE~~~~~-----------------~~~~~~~~~~~~~~i 63 (401)
T 2hzg_A 3 LKIDAVDLFYLSMPEVTDAADGS-QDALLVRVAAG-GHIGWGECEAAP-----------------LPSIAAFVCPKSHGV 63 (401)
T ss_dssp CBEEEEEEEEEECSSCCSSSCGG-GEEEEEEEEET-TEEEEEEECSCH-----------------HHHHHHHHCCCSBTT
T ss_pred CEEEEEEEEEEeccCCCcccccc-ceEEEEEEEeC-CcEEEEeeeccc-----------------CCcccchhHHHHHHH
Confidence 7899999987741 22 67999999999 976 77766531 1122221 345567
Q ss_pred HHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCC----Ch--hhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q psy12655 70 NNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFG----AN--AILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNI 143 (299)
Q Consensus 70 n~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lG----aN--ailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~ 143 (299)
++.++|.|+ |. +.++. +.|.+ ++.++++.| .| ++.|+++|++.+.|+..|+|||++|+ |....
T Consensus 64 ~~~l~~~l~--G~-~~~~~---~~l~~--~~~~~~~~g~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~~~~ 132 (401)
T 2hzg_A 64 CRPVSDSVL--GQ-RLDGP---DDIAR--IAALVGYNSMDLLQAPHMLSGIEMALWDLLGRRLSAPAWALLG---YSASH 132 (401)
T ss_dssp BCCGGGGTT--TC-BCSSH---HHHHH--HHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CSCCC
T ss_pred HHHHHHHhC--CC-CCCHH---HHHHH--HHHhhccCCccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCCCC
Confidence 777999998 67 88875 22322 111222223 68 99999999999999999999999998 64323
Q ss_pred ccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCCh-HH
Q psy12655 144 ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDN-KE 222 (299)
Q Consensus 144 ~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~-e~ 222 (299)
.+| ..+.++++ -++|+| .+++.++..+-|+.+| -| + +.+| + +. +.
T Consensus 133 ~vp--~~~~~~~~------~~~~~~---------~~~a~~~~~~Gf~~iK----ik-~---spvG---~------~~~~~ 178 (401)
T 2hzg_A 133 GKR--PYASLLFG------DTPQET---------LERARAARRDGFAAVK----FG-W---GPIG---R------GTVAA 178 (401)
T ss_dssp CBE--EEEEEECC------SSHHHH---------HHHHHHHHHTTCSEEE----EE-S---TTTT---S------SCHHH
T ss_pred ceE--eeEEcCCC------CCHHHH---------HHHHHHHHHhCCCeEE----Ec-C---CCCC---C------CHHHH
Confidence 444 45455432 123332 1222221111111111 01 0 1132 2 33 44
Q ss_pred HHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCcc-CHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 223 GLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWL-PADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 223 aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~-t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.++.+...-+.+| .++.|.+|+. +.| . |.+|.++++.. +++|+|.+||||+.
T Consensus 179 ~~e~v~avr~a~G--~d~~l~vDan-------~~~--------------~~~~~~a~~~~~~-l~~~~i~~iEqP~~ 231 (401)
T 2hzg_A 179 DADQIMAAREGLG--PDGDLMVDVG-------QIF--------------GEDVEAAAARLPT-LDAAGVLWLEEPFD 231 (401)
T ss_dssp HHHHHHHHHHHHC--SSSEEEEECT-------TTT--------------TTCHHHHHTTHHH-HHHTTCSEEECCSC
T ss_pred HHHHHHHHHHHhC--CCCeEEEECC-------CCC--------------CCCHHHHHHHHHH-HHhcCCCEEECCCC
Confidence 5555554444455 3688889971 222 1 66888888776 67899999999986
No 50
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=99.40 E-value=5.7e-12 Score=123.19 Aligned_cols=212 Identities=18% Similarity=0.159 Sum_probs=133.0
Q ss_pred CceeeEEEeEEeC--------C------CCCeeEEEEEEECC--Cce-EEEeecCCCCcceeeeeeccCCcccccCccHH
Q psy12655 1 MPISKIHARQIFD--------S------RGNPTVEVDLTTEL--GLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVT 63 (299)
Q Consensus 1 ~~I~~v~ar~ilD--------s------rG~pTvevev~~~~--g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~ 63 (299)
|+|++|+.+.+== | ....++.|+|.|++ |.. .|-+++ +| +.+.+|.
T Consensus 2 mkI~~i~~~~~~~p~~~p~~~~~~~~~~~~~~~~~V~v~td~~~G~~G~Ge~~~---~g--------------~~~~~v~ 64 (441)
T 2hxt_A 2 RTIIALETHDVRFPTSRELDGSDAMNPDPDYSAAYVVLRTDGAEDLAGYGLVFT---IG--------------RGNDVQT 64 (441)
T ss_dssp CBEEEEEEEEEECCGGGTTTTCCSSCSSCCCEEEEEEEEESSCTTCEEEEEEEE---CS--------------TTHHHHH
T ss_pred CcEEEEEEEEEEecCCCCcCcccccccCCCcceEEEEEEECCCCCCEEEEeecC---CC--------------CCcHHHH
Confidence 6899999987721 1 11357999999998 876 666554 11 1123455
Q ss_pred HHHHHHHHhHHHHHhcCCCCccchHH----HHHHHHhhcCCCCcc-cCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHh
Q psy12655 64 KAVGFINNDIAPALLKESFEVTQQKE----IDEFMIKLDGTENKS-KFG--ANAILGVSLAVAKAGAAKKGVPLYKHLAD 136 (299)
Q Consensus 64 ~Av~~in~~i~p~Li~~g~~~~dQ~~----ID~~L~~lDgT~nks-~lG--aNailavSlA~akAaA~~~~~pLy~yi~~ 136 (299)
.++ + .++|.|+ |.++.++.. +++.|...+++.++. +.| .+|+.|+++|++.+.|+..|+|||++|+
T Consensus 65 ~~i---~-~l~~~li--G~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLG- 137 (441)
T 2hxt_A 65 AAV---A-ALAEHVV--GLSVDKVIADLGAFARRLTNDSQLRWLGPEKGVMHMAIGAVINAAWDLAARAANKPLWRFIA- 137 (441)
T ss_dssp HHH---H-TTHHHHT--TCBHHHHHHCHHHHHHHHHTCHHHHHTCSSSHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHH-
T ss_pred HHH---H-HHHHHHc--CCChHHHHhhHHHHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhc-
Confidence 444 4 5899998 789998864 777776544333222 123 4899999999999999999999999998
Q ss_pred hhCCCcc---------------------------------------ccccceEEeecCCcCCCCcccceeEEEEecCCCC
Q psy12655 137 LAGNSNI---------------------------------------ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASS 177 (299)
Q Consensus 137 l~g~~~~---------------------------------------~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s 177 (299)
|.... .-|+|+.++.+|+.. . +
T Consensus 138 --G~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~vp~y~~~~g~~~----~-------------~ 198 (441)
T 2hxt_A 138 --ELTPEQLVDTIDFRYLSDALTRDEALAILRDAQPQRAARTATLIEQGYPAYTTSPGWLG----Y-------------S 198 (441)
T ss_dssp --TSCHHHHHHHCCCTTCTTTCCHHHHHHHHHHHGGGHHHHHHHHHHHCEEEEEEEEECTT----S-------------C
T ss_pred --CCCcccccccccccccccccchhhhhhhhhcccccchhhhhhcccCCcceeEecccccC----C-------------C
Confidence 54311 127888888766531 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHHHHHHHHHHHcccccceEEEeeccccccccCC
Q psy12655 178 FSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEG 255 (299)
Q Consensus 178 ~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g 255 (299)
.++.. .+.++..+ .|... ..+|. +.++.++.+...-+..| +++.|.+|+ ++
T Consensus 199 ~e~~~-------~~a~~~~~--~Gf~~vKik~g~---------~~~~d~e~v~avR~a~G--~d~~l~vDa-------n~ 251 (441)
T 2hxt_A 199 DEKLV-------RLAKEAVA--DGFRTIKLKVGA---------NVQDDIRRCRLARAAIG--PDIAMAVDA-------NQ 251 (441)
T ss_dssp HHHHH-------HHHHHHHH--TTCSEEEEECCS---------CHHHHHHHHHHHHHHHC--SSSEEEEEC-------TT
T ss_pred HHHHH-------HHHHHHHH--cCCCEEEEccCC---------CHHHHHHHHHHHHHhcC--CCCeEEEEC-------CC
Confidence 22211 12222222 13111 12231 34555665543333345 468888996 12
Q ss_pred ceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 256 QYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 256 ~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
. +|.+|.++++.. +++|+|.+||+|+.
T Consensus 252 ~---------------~~~~~a~~~~~~-l~~~~i~~iEqP~~ 278 (441)
T 2hxt_A 252 R---------------WDVGPAIDWMRQ-LAEFDIAWIEEPTS 278 (441)
T ss_dssp C---------------CCHHHHHHHHHT-TGGGCCSCEECCSC
T ss_pred C---------------CCHHHHHHHHHH-HHhcCCCeeeCCCC
Confidence 2 456888888776 67899999999986
No 51
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=99.04 E-value=1e-08 Score=97.91 Aligned_cols=209 Identities=14% Similarity=0.193 Sum_probs=129.5
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+ -.|+|. +.|=|+|+|++|.. .|-+... .....
T Consensus 1 MKIt~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~i~td~G~~G~GE~~~~------------------------~~~~~ 56 (378)
T 4hpn_A 1 MKITAVRTHLLEHRLDTPFESASMRFDRRAHVLVEIECDDGTVGWGECLGP------------------------ARPNA 56 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECSC------------------------HHHHH
T ss_pred CEEEEEEEEEEeccCCCCeECCCEEEEEEEEEEEEEEECCCCEEEEEecCC------------------------cchHH
Confidence 89999998765 245663 56789999999875 4433210 11233
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.+.+.++|.|+ |.|+.+...|.+.|....-......+...|+.|+-+|++-+.|+..|+|||+.|+ |.....+|+
T Consensus 57 ~~~~~~~~~li--G~d~~~~e~~~~~l~~~~~~~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLG---g~~~~~~~~ 131 (378)
T 4hpn_A 57 AVVQAYSGWLI--GQDPRQTEKIWAVLYNALRDQGQRGLSLTALSGIDIALWDIKGKHYGASISMLLG---GRWRESVRA 131 (378)
T ss_dssp HHHHHHHTTTT--TSCTTCHHHHHHHHHHHTCTTCSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEEEE
T ss_pred HHHHHHHHHHc--CCChHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHhhhhccCccccccC---CccccCcce
Confidence 45677999998 7899999888887765432222222233588999999999999999999999998 765444544
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
... |+... ....+..+..+ ++.+...+ |. .-..+| .+.++-++
T Consensus 132 --y~~--~~~~~-------------~~~~~~~~~~~-------~~~~~~~~--Gf~~~K~k~g---------~~~~~di~ 176 (378)
T 4hpn_A 132 --YAT--GSFKR-------------DNVDRVSDNAS-------EMAERRAE--GFHACKIKIG---------FGVEEDLR 176 (378)
T ss_dssp --EEE--CCCBC-------------TTCCHHHHHHH-------HHHHHHHT--TCSEEEEECC---------SCHHHHHH
T ss_pred --eee--ecccc-------------ccchhHHHHHH-------HHHHHHHh--ccceeccccc---------CChHHHHH
Confidence 222 22111 11222333322 22333322 31 111222 13566666
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| +++.|.+|+- ..+|.+|-+.+.. .+++|.|.+||+|+.
T Consensus 177 ~v~avr~~~g--~~~~l~vDaN----------------------~~~~~~~A~~~~~-~l~~~~i~~iEeP~~ 224 (378)
T 4hpn_A 177 VIAAVREAIG--PDMRLMIDAN----------------------HGYTVTEAITLGD-RAAGFGIDWFEEPVV 224 (378)
T ss_dssp HHHHHHHHHT--TTSEEEEECT----------------------TCCCHHHHHHHHH-HHGGGCCSCEECCSC
T ss_pred HHHHHHHhcC--CcEEEEEecC----------------------cccCHHHHHHHHh-hhhhcccchhhcCCC
Confidence 6665555555 4688999961 1246677776554 457899999999985
No 52
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=98.96 E-value=6.7e-08 Score=94.49 Aligned_cols=223 Identities=15% Similarity=0.137 Sum_probs=133.2
Q ss_pred CceeeEEEeEEeC----CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHH
Q psy12655 1 MPISKIHARQIFD----SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAP 75 (299)
Q Consensus 1 ~~I~~v~ar~ilD----srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p 75 (299)
|+|++|..+.+=- ..++..|=|+|.|++|.. -|-+... .+ .. ......|++.++|
T Consensus 2 MkIt~i~~~~~~~p~~~~~~~~~v~V~v~Td~G~~G~GE~~~~--~~---------------~~---~~v~~~i~~~l~p 61 (433)
T 3rcy_A 2 VKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAA--SV---------------GP---EAMRAVIEDVFAR 61 (433)
T ss_dssp CCEEEEEEEEECCCTTCTTCSCEEEEEEEETTSCEEEEEECCC--SS---------------CH---HHHHHHHHHHHHH
T ss_pred CeEEEEEEEEEcCCCCccCCceEEEEEEEECCCCEEEEeccCC--CC---------------CH---HHHHHHHHHHHHH
Confidence 8999999997622 125678999999999976 5553321 01 11 2233446777999
Q ss_pred HHhcCCCCccchHHHHHHHHhhcCCCCccc-CCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEee-
Q psy12655 76 ALLKESFEVTQQKEIDEFMIKLDGTENKSK-FGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVI- 153 (299)
Q Consensus 76 ~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~-lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvi- 153 (299)
.|+ |.|+.+...+-+.|....- ..... +...|+.|+-+|+.=..++..|+|||+.|+ |.....+ |....+
T Consensus 62 ~Li--G~dp~~ie~~~~~l~~~~~-~~~g~~~~~~A~saID~ALWDl~gK~~g~Pv~~LLG---G~~r~~v--~~y~~~~ 133 (433)
T 3rcy_A 62 HME--GENPENIELMFRRVYSSGF-TQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLG---GKMNPRI--RAYTYLY 133 (433)
T ss_dssp HTT--TSCTTCHHHHHHHHHHTTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSCSSE--EEEEECC
T ss_pred HhC--CCCcccHHHHHHHHHhccc-ccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCeE--EEEEEEc
Confidence 999 7899998877777754210 00000 113489999999999999999999999999 7543344 445443
Q ss_pred --cCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCC----CCCcCCCCCChHHHHH
Q psy12655 154 --NGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGD----EGGFAPNILDNKEGLR 225 (299)
Q Consensus 154 --nGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgd----eGgfap~~~~~e~aL~ 225 (299)
+|. ++ +....+.++..+ +.++.++. |. +-..+|. ..|..|...+.++.++
T Consensus 134 ~~~g~-------~~------~~~~~~~e~~~~-------~a~~~~~~--Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e 191 (433)
T 3rcy_A 134 PLPHH-------PI------TPFWTSADMAAE-------SAADCVAR--GYTAVKFDPAGPYTLRGGHMPAMTDISLSVE 191 (433)
T ss_dssp CCTTS-------CH------HHHTTCHHHHHH-------HHHHHHHT--TCSEEEECCSCCCBTTCCBCCCHHHHHHHHH
T ss_pred ccCCc-------cc------ccCCCCHHHHHH-------HHHHHHHc--CCCEEEEcCCCCcccccCCCcchhhHHHHHH
Confidence 221 00 011134433333 22333332 31 1112232 2344454445566666
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| .++.|.+|+- + .+|.+|-+.+.+ .+++|.+.+||+|+.
T Consensus 192 ~v~avR~avG--~d~~L~vDan-------~---------------~~t~~~A~~~~~-~Le~~~i~~iEeP~~ 239 (433)
T 3rcy_A 192 FCRKIRAAVG--DKADLLFGTH-------G---------------QFTTAGAIRLGQ-AIEPYSPLWYEEPVP 239 (433)
T ss_dssp HHHHHHHHHT--TSSEEEECCC-------S---------------CBCHHHHHHHHH-HHGGGCCSEEECCSC
T ss_pred HHHHHHHHhC--CCCeEEEeCC-------C---------------CCCHHHHHHHHH-HhhhcCCCEEECCCC
Confidence 6655444555 4688888851 1 245667666554 557899999999985
No 53
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=98.95 E-value=2.7e-08 Score=94.41 Aligned_cols=200 Identities=19% Similarity=0.262 Sum_probs=126.6
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|+.+.+ -.|+| .+++-|+|.|++|.. .|-+ |.. .|.|.+...+.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~a~~~~~~~~~~~V~v~td~G~~G~GE~~~~~-----------------~~~ge~~~~~~ 63 (354)
T 3jva_A 1 MKIKQVHVRASKIKLKETFTIALGTIESADSAIVEIETEEGLVGYGEGGPGI-----------------FITGETLAGTL 63 (354)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCCT-----------------TTTCCCHHHHH
T ss_pred CEEEEEEEEEEEEeccCCEEecCcEEeeceEEEEEEEECCCCEEEEeecCCC-----------------CcCCCCHHHHH
Confidence 88999987765 23555 357889999999875 5533 321 23444555666
Q ss_pred HHHHHhHH---HHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q psy12655 67 GFINNDIA---PALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNI 143 (299)
Q Consensus 67 ~~in~~i~---p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~ 143 (299)
..++ .++ |.|+ |.++.+...+.+.|. . ....|+.|+.+|+.-+.++..|+|||+.|+ |. ..
T Consensus 64 ~~i~-~l~~~~p~l~--G~d~~~~~~~~~~l~----~-----~~~~A~~aid~AlwDl~gk~~g~Pl~~llG---g~-~~ 127 (354)
T 3jva_A 64 ETIE-LFGQAIIGLN--PFNIEKIHEVMDKIS----A-----FAPAAKAAIDIACYDLMGQKAQLPLYQLLG---GY-DN 127 (354)
T ss_dssp HHHH-HHHTTSTTCC--TTCHHHHHHHHHHHC----S-----SCHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CS-CS
T ss_pred HHHH-HHhhcCcccc--CCCcccHHHHHHHHh----c-----ccHHHHHHHHHHHHHHHHHHcCCcHHHHhh---cc-CC
Confidence 6677 688 9998 788888777766664 1 123688999999999999999999999998 63 33
Q ss_pred ccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChH
Q psy12655 144 ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 144 ~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e 221 (299)
.+|+- .. + +..+.++..+ +.++.+.. |. +-..+|. +.+
T Consensus 128 ~v~~~--~~------------------~--~~~~~~~~~~-------~a~~~~~~--G~~~~K~K~g~---------~~~ 167 (354)
T 3jva_A 128 QVITD--IT------------------L--GIDEPNVMAQ-------KAVEKVKL--GFDTLKIKVGT---------GIE 167 (354)
T ss_dssp EEECC--EE------------------E--CSCCHHHHHH-------HHHHHHHT--TCSEEEEECCS---------CHH
T ss_pred eeeee--EE------------------e--CCCCHHHHHH-------HHHHHHHh--CCCeEEEEeCC---------CHH
Confidence 44431 00 1 1223433322 23333332 31 1123332 235
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+-++.+...-+..| +++.|.+|+ ++ .+|.+|.+++...| ++|+|.+||+|+.
T Consensus 168 ~d~~~v~avR~a~g--~~~~l~vDa-------n~---------------~~~~~~a~~~~~~L-~~~~i~~iEqP~~ 219 (354)
T 3jva_A 168 ADIARVKAIREAVG--FDIKLRLDA-------NQ---------------AWTPKDAVKAIQAL-ADYQIELVEQPVK 219 (354)
T ss_dssp HHHHHHHHHHHHHC--TTSEEEEEC-------TT---------------CSCHHHHHHHHHHT-TTSCEEEEECCSC
T ss_pred HHHHHHHHHHHHcC--CCCeEEEEC-------CC---------------CCCHHHHHHHHHHH-HhcCCCEEECCCC
Confidence 66666655444455 468888885 11 24567777776654 7799999999985
No 54
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=98.94 E-value=6e-08 Score=92.18 Aligned_cols=210 Identities=18% Similarity=0.176 Sum_probs=129.7
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF 68 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~ 68 (299)
|+|++|..+.+ -.|+|. ..|-|+|.|+ |.. |--|+..+.. ..|.+.....+...
T Consensus 1 MKI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~v~V~i~td-G~~----------G~GE~~~~~~---p~~~~e~~~~~~~~ 66 (370)
T 2chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVYSE-GLV----------GVGEGGSVGG---PVWSAECAETIKII 66 (370)
T ss_dssp CCCCEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEBT-TBC----------CEEECCCSTT---TTTSSCCHHHHHHH
T ss_pred CEEEEEEEEEEEcccCCceEccceEEEEEEEEEEEEEEC-CcE----------EEEEecCCCC---CccCcccHHHHHHH
Confidence 89999998865 245554 4567777764 653 3333322211 13667777777888
Q ss_pred HHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccc
Q psy12655 69 INNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVP 148 (299)
Q Consensus 69 in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P 148 (299)
|++.++|.|+ |.|+.+...+-+.|...- .-...|+.|+-+|++-+.++..|+|||+.|+ |.....+|+
T Consensus 67 i~~~l~p~li--G~d~~~~~~~~~~~~~~~------~~~~~A~said~AlwDl~gK~~g~Pl~~lLG---g~~~~~~~~- 134 (370)
T 2chr_A 67 VERYLAPHLL--GTDAFNVSGALQTMARAV------TGNASAKAAVEMALLDLKARALGVSIAELLG---GPLRSAIPI- 134 (370)
T ss_dssp HHHHTHHHHT--TSCTTCHHHHHHHHHTTC------SSCHHHHHHHHHHHHHHHHHHTTCCHHHHTT---CCSCSEEEB-
T ss_pred HHHHHHHHhc--CCCcccHHHHHHHHhhcc------cccHHHHHHHHHHHHHHHHHhcCCccccccC---Cccccccce-
Confidence 8889999999 788988777666654321 1224688999999999999999999999998 654333333
Q ss_pred eEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHHH
Q psy12655 149 AFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLRL 226 (299)
Q Consensus 149 ~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~l 226 (299)
...+.+| ...+.+... .+.+. +.|. +-..+| ..++++-++.
T Consensus 135 -~~~~~~~--------------------~~~~~~~~~-------~~~~~-~~g~~~~K~Kvg--------~~~~~~d~~~ 177 (370)
T 2chr_A 135 -AWTLASG--------------------DTKRDLDSA-------VEMIE-RRRHNRFKVKLG--------FRSPQDDLIH 177 (370)
T ss_dssp -EEEECSS--------------------CHHHHHHHH-------HHHHH-TTSCCEEEEECS--------SSCHHHHHHH
T ss_pred -eeeeccC--------------------chhhhHHHH-------HHHHh-hcccceeecccc--------cCChHHHHHH
Confidence 2222111 111222211 11122 1121 111222 2456777777
Q ss_pred HHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 227 IVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 227 l~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+...-+..| +++.|.+|+- + .+|.++-+.+. +.+++|.|.+||+|+.
T Consensus 178 v~avr~~~g--~~~~l~vDaN-------~---------------~~~~~~A~~~~-~~l~~~~~~~iEeP~~ 224 (370)
T 2chr_A 178 MEALSNSLG--SKAYLRVDVN-------Q---------------AWDEQVASVYI-PELEALGVELIEQPVG 224 (370)
T ss_dssp HHHHHHHTT--TTSEEEEECT-------T---------------CCCTHHHHHHH-HHHHTTTCCEEECCSC
T ss_pred HHHHHHhcC--CCcEEEecCC-------C---------------CCCHHHHHHHH-HHHHhcCCceecCCCC
Confidence 766666666 5688999961 1 24556666554 4457899999999985
No 55
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=98.91 E-value=1e-07 Score=91.12 Aligned_cols=204 Identities=18% Similarity=0.160 Sum_probs=124.0
Q ss_pred CceeeEEEeEEe----C-----CCC----CeeEEEEEEECCCce-EE-EeecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 1 MPISKIHARQIF----D-----SRG----NPTVEVDLTTELGLF-RA-AVPSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 1 ~~I~~v~ar~il----D-----srG----~pTvevev~~~~g~~-ra-~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
|+|++|..+.+- + |+| ..+|=|+|+|++|.. -| ++|.+...+ . ....+
T Consensus 10 MKI~~I~~~~~~lPl~~~p~~~a~g~~~~~~~~lV~v~td~G~~G~GE~~~~~~~~~----------------~-~~~~~ 72 (376)
T 4h2h_A 10 LKIAEIQLFQHDLPVVNGPYRIASGDVWSLTTTIVKIIAEDGTIGWGETCPVGPTYA----------------E-AHAGG 72 (376)
T ss_dssp CBEEEEEEEEEEEEBTTCCBCCTTCCBSEEEEEEEEEEETTSCEEEEEECCSSSSSS----------------S-CCHHH
T ss_pred eEEeEEEEEEEecccCCCCeEecCEEEEEEEEEEEEEEECCCCEEEEeecCCCCCcc----------------h-hhHHH
Confidence 899999998762 2 444 356889999999976 44 344432222 1 12233
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
+..+.+.+.|.|+ |.++.+.....++...+.| ...|+.|+-+|+.-+.++..|+|||+.|+ |.....+
T Consensus 73 ~~~~~~~l~~~l~--g~d~~~~~~~~~~~~~~~~-------~~~A~said~ALwDl~gK~~g~Pl~~LLG---G~~r~~v 140 (376)
T 4h2h_A 73 ALAALEVLASGLA--GAEALPLPLHTRMDSLLCG-------HNYAKSALDIAVHDLWGKRLGVPVHELLG---GALTDSV 140 (376)
T ss_dssp HHHHHHHHHHTTT--TCBSSHHHHHHHHHHHCSC-------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEE
T ss_pred HHHHHHHHHHHhc--CCccCcHHHHHHHHHhhcc-------cHHHHHHHHHhhhHHHHHhcCCCceecCC---CCcCCce
Confidence 4444567899998 7888876544444333332 23588999999999999999999999998 7544445
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~a 223 (299)
|+- ..+ +..+..+..+.+ ++.+++ |... ..+|. .+.++-
T Consensus 141 ~~y--~s~--------------------~~~~~~~~~~~a-------~~~~~~--G~~~~KiKvg~--------~~~~~d 181 (376)
T 4h2h_A 141 SSY--YSL--------------------GVMEPDEAARQA-------LEKQRE--GYSRLQVKLGA--------RPIEID 181 (376)
T ss_dssp ECE--EEE--------------------CSCCHHHHHHHH-------HHHHHH--TCSEEEEECCS--------SCHHHH
T ss_pred eEe--eec--------------------ccCCHHHHHHHH-------HHHHhc--CceEEEEecCC--------CCHHHH
Confidence 542 211 223344443332 222221 3211 12221 234556
Q ss_pred HHHHHHHHHHc-ccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 224 LRLIVEAIEKA-GYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~a-g~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.+....+.. | +++.|.+|+ + ..+|.+|-+.+... +.+|++ +||+|++
T Consensus 182 i~~v~~vr~a~~g--~~~~l~vDa-------N---------------~~~~~~~A~~~~~~-l~~~~~-~iEeP~~ 231 (376)
T 4h2h_A 182 IEAIRKVWEAVRG--TGIALAADG-------N---------------RGWTTRDALRFSRE-CPDIPF-VMEQPCN 231 (376)
T ss_dssp HHHHHHHHHHHTT--SCCEEEEEC-------T---------------TCCCHHHHHHHHHH-CTTSCE-EEESCSS
T ss_pred HHHHHHHHhhccC--CeeEEEEee-------c---------------cCCCHHHHHHHHHH-Hhhccc-cccCCcc
Confidence 66666555544 4 468899996 1 12456777766554 478887 8999984
No 56
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=98.91 E-value=1.3e-07 Score=90.25 Aligned_cols=110 Identities=23% Similarity=0.227 Sum_probs=82.7
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+- .|+| .+++=|+|.|++|.. .|-++.. ..|.|.+...+..
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~----------------~~~~~e~~~~~~~ 64 (367)
T 3dg3_A 1 MKIVAIGAIPFSIPYTKPLRFASGEVHAAEHVLVRVHTDDGIVGVAEAPPR----------------PFTYGETQTGIVA 64 (367)
T ss_dssp CBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSCEEEEEECCC----------------TTTTCCCHHHHHH
T ss_pred CEEEEEEEEEEEeeccCCeeccCeEEeeeeEEEEEEEECCCCEEEEeccCC----------------CCccCCCHHHHHH
Confidence 899999987662 3444 367889999999875 4443221 1345666777788
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.|++.+.|.|+ |.++.+...+-+.|... .....|+.|+.+|+.-+.|+..|+|||+.|+
T Consensus 65 ~i~~~l~~~l~--G~d~~~~~~~~~~l~~~-------~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG 123 (367)
T 3dg3_A 65 VIEQYFAPALI--GLTLTEREVAHTRMART-------VGNPTAKAAIDMAMWDALGQSLRLSVSEMLG 123 (367)
T ss_dssp HHHHTHHHHHT--TCBTTCHHHHHHHHTTS-------CSCHHHHHHHHHHHHHHHHHHHTCBHHHHHT
T ss_pred HHHHHHHHHHc--CCCcCCHHHHHHHHHhc-------cCchHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 88888999998 78999888777777544 1235789999999999999999999999998
No 57
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=98.89 E-value=4.9e-08 Score=93.88 Aligned_cols=210 Identities=23% Similarity=0.285 Sum_probs=126.9
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+- .|+| ..+|=|+|+|++|.. .|-+.. .+.+...+..
T Consensus 20 MkIt~Ie~~~~~~Pl~~p~~~s~g~~~~~~~vlV~i~td~G~~G~Ge~~~--------------------~~~~~~~~~~ 79 (388)
T 4h83_A 20 LTITRIETIPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGIIGEAYTGD--------------------EHETMFDIDR 79 (388)
T ss_dssp CBEEEEEEEEEEEEC----------CCEEEEEEEEEEETTSCEEEEEECC--------------------CCTTHHHHHH
T ss_pred CEEEEEEEEEEEeeccCCEECCCEEEEEEEEEEEEEEECCCCEEEEEecC--------------------CcccHHHHHH
Confidence 789999987662 3444 356889999999975 333211 1223455666
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcC-CCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDG-TENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDg-T~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
.|++.++|.|+ |.|+.+...|-+.|....- ......++..|+.|+-+|++-+.++..|+|||+.|+ |.. ..+|
T Consensus 80 ~i~~~lap~Li--G~dp~~ie~l~~~~~~~~~~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pl~~LLG---g~~-~~~~ 153 (388)
T 4h83_A 80 IIHEELAPTLI--GQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWG---GYR-NELP 153 (388)
T ss_dssp HHHHTTHHHHT--TSBTTCHHHHHHHHGGGGCCTTSCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CSC-SEEE
T ss_pred HHHHHHHHHHc--CCChhHHHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHcCCChhhhcC---CCc-CceE
Confidence 77889999999 7899998888777755421 111112334688999999999999999999999998 643 2344
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vgdeGgfap~~~~~e~aL 224 (299)
+-.. ++.+. .....+.+.++ +..+. |... ..+ || .+.++-+
T Consensus 154 ~y~~----~~~~~-------------~~~~~~~~~~~----------~~~~~--G~~~~Kikv---g~-----~~~~~d~ 196 (388)
T 4h83_A 154 MIAI----GGYYG-------------EPLGSIADEMH----------NYQEL--GLAGVKFKV---GG-----LSAAEDA 196 (388)
T ss_dssp EEEE----ECCTT-------------CTTCSHHHHHH----------HHHHH--TBSEEEEEC---SS-----SCHHHHH
T ss_pred EEee----ccccC-------------CCHHHHHHHHH----------HHHHc--CCceEeecC---CC-----CCHHHHH
Confidence 3221 22111 11122333222 22221 3111 112 12 2445556
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| +++.|.+|+- ..+|.++-+++... +++|.|.+||+|+.
T Consensus 197 ~~v~avR~~~G--~~~~l~vDaN----------------------~~~~~~~A~~~~~~-l~~~~~~~iEeP~~ 245 (388)
T 4h83_A 197 ARITAAREAAG--DDFIICIDAN----------------------QGYKPAVAVDLSRR-IADLNIRWFEEPVE 245 (388)
T ss_dssp HHHHHHHHHHC--SSSEEEEECT----------------------TCBCHHHHHHHHHH-TTTSCCCCEESCBC
T ss_pred HHHHHHHHhcC--CCeEEEEecC----------------------cCCCHHHHHHHHHH-hhhcCcceeecCcc
Confidence 66655555555 5788999961 12456776666554 47899999999984
No 58
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=98.88 E-value=3.8e-07 Score=87.99 Aligned_cols=215 Identities=19% Similarity=0.214 Sum_probs=130.4
Q ss_pred CceeeEEEeEEeCC-----CCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHH
Q psy12655 1 MPISKIHARQIFDS-----RGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIA 74 (299)
Q Consensus 1 ~~I~~v~ar~ilDs-----rG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~ 74 (299)
|+|++|..+.+=-. . .+.+=|+|.|++|.. -|-+. .+.++..++..+-+.++
T Consensus 3 MkI~~i~~~~~~~p~~~~~~-~~~~~V~v~td~G~~G~GE~~---------------------~~~~~~~~~~~~~~~l~ 60 (393)
T 4dwd_A 3 LKIAKVEALSVAMGDGTGWM-PTSAFVRITAEDGTVGWGEAS---------------------PMLGGIASLGVVARDIA 60 (393)
T ss_dssp CBEEEEEEEEEECCC------CEEEEEEEEETTSCEEEEEEC---------------------CGGGGHHHHHHHHHHTH
T ss_pred CEEEEEEEEEEcCCCccccc-ceEEEEEEEECCCCEEEEEcc---------------------CcHHHHHHHHHHHHHHH
Confidence 78999999987422 1 468999999999874 44332 12234444344334499
Q ss_pred HHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEee
Q psy12655 75 PALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVI 153 (299)
Q Consensus 75 p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvi 153 (299)
|.|+ |.|+.+...+-+.|... .+..+. -+...|+.|+-+|+.-..++..|+|||+.|+ |.... .+|...-+
T Consensus 61 p~li--G~d~~~~e~~~~~l~~~~~~~g~~-g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g~~r~--~v~~y~s~ 132 (393)
T 4dwd_A 61 PFLE--GQEVLDHAVLLDRMMHRLVKLGPE-GIATAALAACDIALWDLKGKLLGQPIYKLLG---GAWRT--RLPCYSSI 132 (393)
T ss_dssp HHHT--TSBGGGHHHHHHHHHHHTGGGCCT-THHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCS--EEEEEEEE
T ss_pred HHHC--CCCcccHHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCC--ceeeEEec
Confidence 9999 78999888877776543 221111 1223789999999999999999999999998 65333 34444444
Q ss_pred cCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHH-HHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHHHHHHH
Q psy12655 154 NGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHL-KKVINTKFGL--DATAVGDEGGFAPNILDNKEGLRLIVEA 230 (299)
Q Consensus 154 nGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l-~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ll~eA 230 (299)
+|+. ..+.++..+ ++ ++.+++ |. +-..+|....+ ...++++.++.+...
T Consensus 133 ~g~~-----------------~~~~e~~~~-------~a~~~~~~~--G~~~~KlKvG~~~~~--~~~~~~~d~~~v~av 184 (393)
T 4dwd_A 133 GGNA-----------------ARSVDEVVR-------EVARRVEAE--QPAAVKIRWDGDRTR--CDVDIPGDIAKARAV 184 (393)
T ss_dssp CCCS-----------------SSCHHHHHH-------HHHHHHHHH--CCSEEEEECCCCTTC--CSCCHHHHHHHHHHH
T ss_pred CccC-----------------CCCHHHHHH-------HHHHHHHHc--CCCEEEEccCCCCcc--cccCHHHHHHHHHHH
Confidence 3221 122333222 22 222322 31 11123322222 234677888877654
Q ss_pred HHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 231 IEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 231 i~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
-+..| .++.|.+|+ ++ .+|.+|-+.+.. .+++|+|.+||+|+.
T Consensus 185 R~a~g--~~~~l~vDa-------N~---------------~~~~~~A~~~~~-~L~~~~i~~iEqP~~ 227 (393)
T 4dwd_A 185 RELLG--PDAVIGFDA-------NN---------------GYSVGGAIRVGR-ALEDLGYSWFEEPVQ 227 (393)
T ss_dssp HHHHC--TTCCEEEEC-------TT---------------CCCHHHHHHHHH-HHHHTTCSEEECCSC
T ss_pred HHHhC--CCCeEEEEC-------CC---------------CCCHHHHHHHHH-HHHhhCCCEEECCCC
Confidence 44446 467888885 11 245567666554 557899999999985
No 59
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=98.86 E-value=2.7e-07 Score=88.55 Aligned_cols=209 Identities=19% Similarity=0.229 Sum_probs=134.0
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|+.+.+ -.|+| ...+=|+|.|++|.. .|-+ |.| . ..|.|.+...+.
T Consensus 6 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~--------------~-~~~~~e~~~~~~ 70 (383)
T 3i4k_A 6 LTIQKVESRILDVPLIRPHGFATTTSTEQHILLVSVHLENGVIGYGEGVVPG--------------G-PWWGGESVETMK 70 (383)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECCSS--------------S-TTTTSCCHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEecceEEEeeeEEEEEEEECCCCEEEEecccCC--------------C-CccCCCCHHHHH
Confidence 68999988765 34555 356889999999875 4433 221 0 146666778888
Q ss_pred HHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 67 GFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
..|++.++|.|+ |.|+.+...+-+.|...-- -...|+.|+.+|+.-..++..|+|||+.|+ |.....+|
T Consensus 71 ~~i~~~l~p~l~--G~d~~~~~~~~~~l~~~~~------~~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r~~v~ 139 (383)
T 3i4k_A 71 ALVDGYLAPVLI--GRAVSELAGIMADLERVVA------RARYAKAAVDVAMHDAWARSLNVPVRDLLG---GTVRDKVD 139 (383)
T ss_dssp HHHHHTTHHHHT--TSBGGGHHHHHHHHHHHCC------SCHHHHHHHHHHHHHHHHHHTTSBGGGGTT---CCSCSEEE
T ss_pred HHHHhhhhHHHc--CCCccCHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCeEE
Confidence 888888999999 7899988887777754311 124689999999999999999999999998 65434455
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL 224 (299)
+ ...+. ..+..+.++ +.++.+.+ .|. +-..+|. .++++-+
T Consensus 140 ~--~~t~~--------------------~~~~~~~~~-------~a~~~~~~-~G~~~~K~Kvg~--------~~~~~d~ 181 (383)
T 3i4k_A 140 V--TWALG--------------------VLPLDVAVA-------EIEERIEE-FGNRSFKLKMGA--------GDPAEDT 181 (383)
T ss_dssp B--CEEEC--------------------SCCHHHHHH-------HHHHHHHH-HCCSEEEEECCS--------SCHHHHH
T ss_pred E--eEEee--------------------CCCHHHHHH-------HHHHHHHh-cCCcEEEEeeCC--------CCHHHHH
Confidence 4 21111 123333332 22233332 131 1112331 2567777
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+ ++ .+|.+|-+++ .+.+++|+|.+||+|+.
T Consensus 182 ~~v~avR~a~g--~~~~l~vDa-------n~---------------~~~~~~A~~~-~~~l~~~~i~~iEqP~~ 230 (383)
T 3i4k_A 182 RRVAELAREVG--DRVSLRIDI-------NA---------------RWDRRTALHY-LPILAEAGVELFEQPTP 230 (383)
T ss_dssp HHHHHHHHTTT--TTSEEEEEC-------TT---------------CSCHHHHHHH-HHHHHHTTCCEEESCSC
T ss_pred HHHHHHHHHcC--CCCEEEEEC-------CC---------------CCCHHHHHHH-HHHHHhcCCCEEECCCC
Confidence 77655444445 468888885 12 2455666554 45667899999999985
No 60
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.85 E-value=2.9e-07 Score=88.28 Aligned_cols=208 Identities=18% Similarity=0.167 Sum_probs=130.4
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|..+.+= .|+| ...+=|+|.|++|.. .|-+ |.+ . ..|++.+...+.
T Consensus 5 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~i~td~G~~G~GE~~~~~------------~---~~y~~e~~~~~~ 69 (381)
T 3fcp_A 5 ATVEQIESWIVDVPTIRPHKLSMTTMGCQSLVIVRLTRSDGICGIGEATTIG------------G---LSYGVESPEAIS 69 (381)
T ss_dssp CBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSCEEEEEEECST------------T---TTSSSCCHHHHH
T ss_pred cEEEEEEEEEEeccccCCeEecccEEEeeeEEEEEEEECCCCEEEeccccCC------------C---CccCCCCHHHHH
Confidence 689999988762 3444 356889999999875 4432 221 0 136666677778
Q ss_pred HHHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 67 GFINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
..|++.+.|.|+ |.++.+...+-+.|... .| ...|+.|+.+|+.-..++..|+|||+.|+ |.....+
T Consensus 70 ~~i~~~l~p~l~--G~d~~~~~~~~~~l~~~~~g-------~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r~~v 137 (381)
T 3fcp_A 70 SAITHYLTPLLK--GQPADNLNALTARMNGAIKG-------NTFAKSAIETALLDAQGKALGLPVSALLG---GALQTAL 137 (381)
T ss_dssp HHHHHTHHHHHT--TSBSSCHHHHHHHHHHHCCS-------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEE
T ss_pred HHHHHHHHHHhc--CCCcCCHHHHHHHHHHHhcC-------cHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCce
Confidence 888888999999 78999988887777543 22 24688999999999999999999999998 6543445
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~a 223 (299)
|+- ..+..| +..+.++ +.++.+.+ .|. +-..+|. .++++-
T Consensus 138 ~~~--~t~~~~--------------------~~~~~~~-------~~~~~~~~-~G~~~~KiKvg~--------~~~~~d 179 (381)
T 3fcp_A 138 PVL--WTLASG--------------------DTAKDIA-------EGEKLLAE-GRHRAFKLKIGA--------RELATD 179 (381)
T ss_dssp EBC--EEECSS--------------------CHHHHHH-------HHHHHTC-----CEEEEECCS--------SCHHHH
T ss_pred eeE--EEecCC--------------------ChHHHHH-------HHHHHHHh-CCCCEEEEecCC--------CChHHH
Confidence 542 111111 2222222 22233321 121 1112321 245677
Q ss_pred HHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 224 LRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.+...-+..| .++.|.+|+ ++ .+|.++-+.+. +.+++|+|.+||+|+.
T Consensus 180 ~~~v~avR~a~g--~~~~l~vDa-------N~---------------~~~~~~A~~~~-~~l~~~~i~~iEeP~~ 229 (381)
T 3fcp_A 180 LRHTRAIVEALG--DRASIRVDV-------NQ---------------AWDAATGAKGC-RELAAMGVDLIEQPVS 229 (381)
T ss_dssp HHHHHHHHHHTC--TTCEEEEEC-------TT---------------CBCHHHHHHHH-HHHHHTTCSEEECCBC
T ss_pred HHHHHHHHHHcC--CCCeEEEEC-------CC---------------CCCHHHHHHHH-HHHhhcCccceeCCCC
Confidence 777665555556 468888996 11 24556655554 4557799999999985
No 61
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=98.84 E-value=2.4e-07 Score=89.89 Aligned_cols=224 Identities=13% Similarity=0.110 Sum_probs=132.0
Q ss_pred CceeeEEEeEEeC----CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHH
Q psy12655 1 MPISKIHARQIFD----SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAP 75 (299)
Q Consensus 1 ~~I~~v~ar~ilD----srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p 75 (299)
|+|++|+.+.+=- -.+...+=|+|+|++|.. -|-+++. . +.+ ......+++.++|
T Consensus 1 MkIt~i~~~~v~~plp~~~~~~~~~V~v~td~G~~G~GE~~~~-~----------------~~~---~~~~~~i~~~l~p 60 (412)
T 4e4u_A 1 MKIVSLETHIVAVPPPHVGGMYWIFVKLKTDDGIEGVGEIYSA-T----------------FGP---KAMAPIIDDVFER 60 (412)
T ss_dssp CCEEEEEEEEEECCTTCTTCSEEEEEEEEETTSCEEEEEECCC-S----------------SCH---HHHHHHHHHHHHH
T ss_pred CEEEEEEEEEEccCCCccCCCceEEEEEEECCCCEEEEeecCC-C----------------CCH---HHHHHHHHHHhHH
Confidence 8999999998732 124678999999999975 5554321 0 111 2233446667899
Q ss_pred HHhcCCCCccchHHHHHHHHhhcCCCCcccCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEee
Q psy12655 76 ALLKESFEVTQQKEIDEFMIKLDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVI 153 (299)
Q Consensus 76 ~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lG--aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvi 153 (299)
.|+ |.|+.+...+-+.|... +-....-| ..|+.|+-+|+.-..|+..|+|||+.|+ |.....+|+ ..-+
T Consensus 61 ~Li--G~dp~~~e~~~~~l~~~--~~~~~~~~~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--yas~ 131 (412)
T 4e4u_A 61 HLL--NRDPHHVERLFRQAYSS--GFTQRPDLTMMGVVSGLEMACWDIIGKAAAKPVYELLG---GRIHERLRS--YTYL 131 (412)
T ss_dssp HTT--TSCTTCHHHHHHHHHHT--TTCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTT---CCCCSSEEE--EEEC
T ss_pred HhC--CCChhHHHHHHHHHHHh--hhhcCCcchHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCcCCeeEE--EEec
Confidence 999 78999988877777432 11100111 3588999999999999999999999999 754344543 3322
Q ss_pred cCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccC-C---CCCcCCCCCChHHHHHHH
Q psy12655 154 NGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVG-D---EGGFAPNILDNKEGLRLI 227 (299)
Q Consensus 154 nGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vg-d---eGgfap~~~~~e~aL~ll 227 (299)
..+. .+. .....+.++..+.+ ++.++. |. +-..+| + .+|..+...+.++.++.+
T Consensus 132 ~~~~-~~~----------~~~~~~~e~~~~~a-------~~~~~~--G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v 191 (412)
T 4e4u_A 132 YPKN-AKG----------EYDYDDPDLAAECA-------AENVKL--GFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFC 191 (412)
T ss_dssp CCBC-TTS----------CBCSSCHHHHHHHH-------HHHHHH--TCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHH
T ss_pred cCCc-ccc----------cccCCCHHHHHHHH-------HHHHHc--CCCEEEECCCCCCccccccccchhhHHHHHHHH
Confidence 2111 000 01123444443322 222222 21 011122 1 123334333456667766
Q ss_pred HHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 228 VEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 228 ~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
...-+..| .++.|.+|+- + .+|.+|-+.+ .+.+++|.|.+||+|+.
T Consensus 192 ~avR~a~G--~d~~l~vDaN-------~---------------~~~~~~A~~~-~~~L~~~~i~~iEeP~~ 237 (412)
T 4e4u_A 192 RRVREAVG--SKADLLFGTH-------G---------------QMVPSSAIRL-AKRLEKYDPLWFEEPVP 237 (412)
T ss_dssp HHHHHHHT--TSSEEEECCC-------S---------------CBCHHHHHHH-HHHHGGGCCSEEECCSC
T ss_pred HHHHHHhC--CCCeEEEECC-------C---------------CCCHHHHHHH-HHHhhhcCCcEEECCCC
Confidence 55444555 4678888851 1 2456676655 45567899999999985
No 62
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=98.83 E-value=1.1e-07 Score=92.16 Aligned_cols=120 Identities=18% Similarity=0.186 Sum_probs=80.2
Q ss_pred ceeeEEEeEEeCCCCCee-------------------------------EEEEEEECCCce-EEEeecCCCCcceeeeee
Q psy12655 2 PISKIHARQIFDSRGNPT-------------------------------VEVDLTTELGLF-RAAVPSGASTGIYEALEL 49 (299)
Q Consensus 2 ~I~~v~ar~ilDsrG~pT-------------------------------vevev~~~~g~~-ra~~psGaS~G~~Ea~el 49 (299)
+|++|..+.|--.+-+|. |=|+|.|++|.. -|-+..
T Consensus 27 ~I~~i~~~~v~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~r~VlVri~td~G~~G~GE~~~------------ 94 (412)
T 4h1z_A 27 RVKKIESFTLTLPRETPYLGKPRPGEEPNGRGYLVRKANRTVYPTFDRSVLVRIETENGAVGWGETYG------------ 94 (412)
T ss_dssp CEEEEEEEEEECC------------CCCCTTSEEECTTTCCEEESSCEEEEEEEEETTCCEEEEEEEC------------
T ss_pred eeeEEEEEEEecccCCccccccccccccccccceeeccCcccCCCCCCcEEEEEEECCCCEEEEecCC------------
Confidence 689999988877666653 668889988864 333211
Q ss_pred ccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhc-CCCCcccCCChhhHHHHHHHHHHHHHhcCC
Q psy12655 50 RDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLD-GTENKSKFGANAILGVSLAVAKAGAAKKGV 128 (299)
Q Consensus 50 rd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~nks~lGaNailavSlA~akAaA~~~~~ 128 (299)
.-+.....+.|++.++|.|+ |.|+.+...|-+.|.++- .......+..+|+.|+-+|++-+.++..|+
T Consensus 95 ---------~~~~~~~~~~i~~~lap~li--G~dp~~~~~i~~~l~~~~~~~~~~~g~~~~A~saiD~ALwDl~gK~~g~ 163 (412)
T 4h1z_A 95 ---------LVAPRATMEIIDDLLADFTI--GRDPFDAAAIHDDLYDLMRVRGYTGGFYVDALAAIDIALWDLAGKLAGL 163 (412)
T ss_dssp ---------SSCHHHHHHHHHHTHHHHHT--TSCGGGHHHHHHHHHTTTGGGTCCSHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ---------CCCHHHHHHHHHHHHHHHhC--CCCcchHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHcCC
Confidence 11223455667888999999 789999888877775432 111111112358889999999999999999
Q ss_pred chHHHHHhhhCCCcccccc
Q psy12655 129 PLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 129 pLy~yi~~l~g~~~~~lP~ 147 (299)
|||+.|+ |.....+|+
T Consensus 164 Pl~~LLG---G~~~~~v~~ 179 (412)
T 4h1z_A 164 PVCKLLG---GQRRDRIAA 179 (412)
T ss_dssp BGGGGTT---CCCCSEEEE
T ss_pred CHHHhcC---CCCCceEEE
Confidence 9999998 765444443
No 63
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=98.83 E-value=1.1e-07 Score=91.95 Aligned_cols=227 Identities=14% Similarity=0.166 Sum_probs=130.5
Q ss_pred CceeeEEEeEEeC----CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHH
Q psy12655 1 MPISKIHARQIFD----SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAP 75 (299)
Q Consensus 1 ~~I~~v~ar~ilD----srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p 75 (299)
|+|++|+.+.+=- -.+...+=|+|+|++|.. -|-+++. . +.+ ......|++.++|
T Consensus 2 MkIt~i~~~~v~~plp~~~~~~~~~V~v~td~G~~G~GE~~~~-~----------------~~~---~~~~~~i~~~l~p 61 (404)
T 4e5t_A 2 MRLSDIETFVVGNPPPRHGGRYFIFVKLVTACGITGYGEIYNA-T----------------FGP---DLVAKMAEDVFAR 61 (404)
T ss_dssp CCEEEEEEEEEECCTTCTTCSEEEEEEEEETTSCEEEEEECCC-S----------------SCH---HHHHHHHHHHHHH
T ss_pred CEEEEEEEEEeccCCcccCCCceEEEEEEECCCCEEEEeeccC-C----------------Cch---HHHHHHHHHHHHH
Confidence 8999999998731 124678999999999975 5544321 0 111 2223446667899
Q ss_pred HHhcCCCCccchHHHHHHHHhhcCCCCcccCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEee
Q psy12655 76 ALLKESFEVTQQKEIDEFMIKLDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVI 153 (299)
Q Consensus 76 ~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lG--aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvi 153 (299)
.|+ |.|+.+...+-+.|..- +-....-| ..|+.|+-+|+.=..++..|+|||+.|+ |.....+|+ ..-+
T Consensus 62 ~li--G~dp~~~e~~~~~~~~~--~~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~ 132 (404)
T 4e5t_A 62 QFA--GEDPHHIEKLWHKTYGA--GYTQRPDVTVMGVLSGLEMACWDIIGKAAGKPAYELLG---GKVHERLRS--YTYL 132 (404)
T ss_dssp HTT--TSCTTCHHHHHHHHHTT--TSCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTT---CCCCSSEEE--EEEC
T ss_pred Hhc--CCChhHHHHHHHHHHHh--hhhcCCchHHHHHHHHHHHHHHHHhhhHcCCcHHHHcC---CCCcCeEEE--EEEe
Confidence 999 78999887777766432 11100111 3588999999999999999999999999 754334543 3222
Q ss_pred cC-CcCC--CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccC-CC---CCcCCCCCChHHHH
Q psy12655 154 NG-GSHA--GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAVG-DE---GGFAPNILDNKEGL 224 (299)
Q Consensus 154 nG-G~ha--~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~vg-de---Ggfap~~~~~e~aL 224 (299)
.. +.|. +. ++ ..+..+.++..+.+ ++.++. |... ..+| +. +|..+...+.++.+
T Consensus 133 ~~~~~~~~p~~--d~------~~~~~~~e~~~~~a-------~~~~~~--G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~ 195 (404)
T 4e5t_A 133 YPTDGDVYPDP--DK------PNVYNDADMAAEAA-------AKAVDQ--GFTAVKFDPAGAYTIYDGHQPSLEDLERSE 195 (404)
T ss_dssp CC------------C------CCTTTCHHHHHHHH-------HHHHHH--TCSEEEECCSCCCBTTCSBCCCHHHHHHHH
T ss_pred ccccccccccc--cc------cccCCCHHHHHHHH-------HHHHHc--CCCEEeeCCCCCCcccccccccHHHHHHHH
Confidence 10 1110 00 00 01123444433322 233322 3101 1222 11 22333333456666
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+ ++ .+|.+|-+.+ .+.+++|.+.+||+|+.
T Consensus 196 ~~v~avR~a~G--~d~~l~vDa-------n~---------------~~~~~~A~~~-~~~l~~~~i~~iEeP~~ 244 (404)
T 4e5t_A 196 AFCKQIRAAVG--TKADLLFGT-------HG---------------QFTVSGAKRL-ARRLEAYDPLWFEEPIP 244 (404)
T ss_dssp HHHHHHHHHHG--GGSEEEECC-------CS---------------CBCHHHHHHH-HHHHGGGCCSEEECCSC
T ss_pred HHHHHHHHHcC--CCCeEEEeC-------CC---------------CcCHHHHHHH-HHHHhhcCCcEEECCCC
Confidence 76655445555 467888885 11 2455676654 45667899999999985
No 64
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=98.82 E-value=1.2e-06 Score=84.14 Aligned_cols=208 Identities=16% Similarity=0.169 Sum_probs=130.3
Q ss_pred ceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH
Q psy12655 2 PISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF 68 (299)
Q Consensus 2 ~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~ 68 (299)
+|++|..+.+ -.|+|. ..+=|+|.|++|.. .|-+. .+.. ..|++.+...+...
T Consensus 7 ~I~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~-----------~~~~---~~y~~e~~~~~~~~ 72 (382)
T 3dgb_A 7 AIESIETIIVDLPTIRPHKLAMHTMQNQTLVLIRLRCADGIEGLGEST-----------TIGG---LAYGNESPDSIKTN 72 (382)
T ss_dssp BEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEE-----------CSTT---TTSSSCCHHHHHHH
T ss_pred eeeEEEEEEEeeccCCCeEecCeEEeeeeEEEEEEEECCCCEEEEecc-----------cCCC---CccCCCCHHHHHHH
Confidence 3888887654 356663 46788999999875 44332 1110 13666677777888
Q ss_pred HHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 69 INNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 69 in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|++.++|.|+ |.++.+...+-+.|... .| ...|+.|+-+|+.-..++..|+|||+.|+ |.....+|+
T Consensus 73 i~~~l~p~li--G~d~~~~~~~~~~l~~~~~g-------~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~r~~v~~ 140 (382)
T 3dgb_A 73 IDRFVAPLLI--GQDASNINAAMLRLEQSIRG-------NTFAKSGIESALLDAQGKRLGLPVSELLG---GRVRDALPV 140 (382)
T ss_dssp HHHTHHHHHT--TSBTTCHHHHHHHHHHHCCS-------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEEEB
T ss_pred HHHHHHHHhc--CCCccCHHHHHHHHHHHhcC-------chHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCeeeE
Confidence 8888999999 78999988887777553 22 24688999999999999999999999998 654444554
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
- ..+.. + +..+.++ +.++.+++ .|. +-..+|. .++++-++
T Consensus 141 ~--~t~~~------------------~--~~~~~~~-------~~~~~~~~-~G~~~~KiKvg~--------~~~~~d~~ 182 (382)
T 3dgb_A 141 A--WTLAS------------------G--DTAKDIA-------EAQKMLDL-RRHRIFKLKIGA--------GEVDRDLA 182 (382)
T ss_dssp C--EEECS------------------S--CHHHHHH-------HHHHHHHT-TSCSEEEEECCS--------SCHHHHHH
T ss_pred E--EEecC------------------C--ChHHHHH-------HHHHHHHh-CCCCEEEEeeCC--------CCHHHHHH
Confidence 2 11111 1 2222222 22333331 131 1112331 23566666
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| .++.|.+|+ ++ .+|.++-+.+ .+.+++|+|.+||+|+.
T Consensus 183 ~v~avR~a~g--~~~~l~vDa-------N~---------------~~~~~~A~~~-~~~l~~~~i~~iEqP~~ 230 (382)
T 3dgb_A 183 HVIAIKKALG--DSASVRVDV-------NQ---------------AWDEAVALRA-CRILGGNGIDLIEQPIS 230 (382)
T ss_dssp HHHHHHHHHG--GGSEEEEEC-------TT---------------CBCHHHHHHH-HHHHHTTTCCCEECCBC
T ss_pred HHHHHHHHcC--CCCeEEEeC-------CC---------------CCCHHHHHHH-HHHHhhcCcCeeeCCCC
Confidence 6654444445 468888885 12 2455665554 45667899999999985
No 65
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=98.81 E-value=1.6e-07 Score=90.63 Aligned_cols=118 Identities=19% Similarity=0.225 Sum_probs=81.3
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|+...+ ..++...|=|+|.|++|.. -|-+.. ++ .. ......|++.++|.|+
T Consensus 6 mkIt~v~~~~~-~~~~~~~~~V~v~td~G~~G~GE~~~---~~---------------~~---~~~~~~i~~~l~p~li- 62 (401)
T 3sbf_A 6 TIISDIHCIIT-KPDRHNLITVVVETNEGVTGFGCATF---QQ---------------RP---LAVKTMVDEYLKPILI- 62 (401)
T ss_dssp CBEEEEEEEEE-CSSSSCEEEEEEEETTSCEEEEECCC---TT---------------SH---HHHHHHHHHTHHHHHT-
T ss_pred eEEEEEEEEEE-cCCCceEEEEEEEeCCCCEEEEcccc---CC---------------CH---HHHHHHHHHHHHHHHc-
Confidence 89999999866 3333378999999999975 554321 11 11 1223456677999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
|.|+.+...+-+.|...- -.....+..+|+.|+-+|+.=..++..|+|||+.|+ |.....+|
T Consensus 63 -G~d~~~~e~~~~~~~~~~-~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~ 124 (401)
T 3sbf_A 63 -GKNANNIEDLWQMMMVNA-YWRNGPVINNAISGVDMALWDIKAKLAGMPLHQLFG---GKSRDAIP 124 (401)
T ss_dssp -TSBTTCHHHHHHHHHHTT-SSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSSSSEE
T ss_pred -CCChhhHHHHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHhHhHhCCcHHHHhC---CCcCCeee
Confidence 789999888877775431 000001123689999999999999999999999998 65433444
No 66
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=98.80 E-value=2e-07 Score=90.52 Aligned_cols=208 Identities=18% Similarity=0.194 Sum_probs=124.6
Q ss_pred CceeeEEEeEEe------------------------CCCCCe----eEEEEEEECCCce-EEEeecCCCCcceeeeeecc
Q psy12655 1 MPISKIHARQIF------------------------DSRGNP----TVEVDLTTELGLF-RAAVPSGASTGIYEALELRD 51 (299)
Q Consensus 1 ~~I~~v~ar~il------------------------DsrG~p----Tvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd 51 (299)
|+|++|+++.+= +|||.- +|=|+|.|++|.. .|-+..+
T Consensus 23 m~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~lV~v~td~G~~G~GE~~~~------------- 89 (412)
T 3stp_A 23 MKIKSVRTRVWTWKGPTVPPQGNFCTNASDALWMKGDAMSSFRFHQWLTCEVETEDGTIGIGNAALA------------- 89 (412)
T ss_dssp CCEEEEEEEEEEECSCCCCCCSSSCCCGGGGSCCCSCTTTTTCCCEEEEEEEEETTSCEEEEEECSS-------------
T ss_pred cEEEEEEEEEEeccCCCCCCCCCCCCCchhccCCCCCcceEEEeccEEEEEEEECCCCEEEEeccCC-------------
Confidence 899999998761 444433 5778999998875 5532110
Q ss_pred CCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCccc--CCChhhHHHHHHHHHHHHHhcCCc
Q psy12655 52 NDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSK--FGANAILGVSLAVAKAGAAKKGVP 129 (299)
Q Consensus 52 ~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~--lGaNailavSlA~akAaA~~~~~p 129 (299)
+ ..+...|++.++|.|+ |.|+.+-..+-+.|.... ....+ +...|+.|+-+|+.-+.|+..|+|
T Consensus 90 -------~---~~~~~~i~~~l~p~Li--G~dp~~~e~l~~~~~~~~--~~~g~~g~~~~A~saiD~ALwDl~gK~~g~P 155 (412)
T 3stp_A 90 -------P---SVVKKVIDDWYAPLVI--GEDPFDYAYIWEKMYRRS--HAWGRKGIGMTAISAIDIAIWDLMGKLVGKP 155 (412)
T ss_dssp -------H---HHHHHHHHHTTHHHHT--TSCGGGHHHHHHHHHHHT--HHHHSSTHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred -------H---HHHHHHHHHHHHHHHC--CCCcchHHHHHHHHHHHh--hhcCCcchHHHHHHHHHHHHHHHHhhhcCCC
Confidence 0 1234556777999999 789998877766664421 00001 224688999999999999999999
Q ss_pred hHHHHHhhhCCCccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCC--ccc
Q psy12655 130 LYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDA--TAV 207 (299)
Q Consensus 130 Ly~yi~~l~g~~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~--t~v 207 (299)
||+.|+ |.....+| ...-. . ...+.++..+ +.++.++ .|-.. ..+
T Consensus 156 v~~LLG---G~~r~~v~--~y~s~--~-----------------~~~~~e~~~~-------~a~~~~~--~Gf~~iKik~ 202 (412)
T 3stp_A 156 VFKLLG---GRTKDRIP--VYYSK--L-----------------YAGSIEAMQK-------EAEEAMK--GGYKAFKSRF 202 (412)
T ss_dssp HHHHHT---CCSSSSEE--EEEEC--C-----------------CSCCHHHHHH-------HHHHHHT--TTCSEEEEEC
T ss_pred HHHhcC---CCCCceEE--EEEEe--c-----------------CCCCHHHHHH-------HHHHHHH--cCCCEEEEec
Confidence 999998 65333343 33311 0 0113333322 2223322 23100 112
Q ss_pred CCC---CCcCCCCCChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHH
Q psy12655 208 GDE---GGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEF 284 (299)
Q Consensus 208 gde---Ggfap~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l 284 (299)
|.. || .+.++.++.+...-+..| .++.|.+|+- + .+|.+|-+.+.. .
T Consensus 203 g~gp~dg~-----~~~~~die~v~avReavG--~d~~L~vDaN-------~---------------~~~~~~Ai~~~~-~ 252 (412)
T 3stp_A 203 GYGPKDGM-----PGMRENLKRVEAVREVIG--YDNDLMLECY-------M---------------GWNLDYAKRMLP-K 252 (412)
T ss_dssp CCCGGGHH-----HHHHHHHHHHHHHHHHHC--SSSEEEEECT-------T---------------CSCHHHHHHHHH-H
T ss_pred ccCccccc-----chHHHHHHHHHHHHHHcC--CCCeEEEECC-------C---------------CCCHHHHHHHHH-H
Confidence 211 11 234566666655444555 4688888851 1 245677776655 4
Q ss_pred HhcCCeeEeecCCC
Q psy12655 285 IKEYPIVSIEDPML 298 (299)
Q Consensus 285 ~~~yPIvsiEDp~~ 298 (299)
+++|.|.+||+|+.
T Consensus 253 Le~~~i~~iEeP~~ 266 (412)
T 3stp_A 253 LAPYEPRWLEEPVI 266 (412)
T ss_dssp HGGGCCSEEECCSC
T ss_pred HHhcCCCEEECCCC
Confidence 57899999999985
No 67
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=98.80 E-value=1.1e-06 Score=85.97 Aligned_cols=118 Identities=19% Similarity=0.222 Sum_probs=80.6
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECC-Cce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHh
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTEL-GLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALL 78 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~-g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li 78 (299)
|+|++|+...+ +..+...|=|+|.|++ |.. -|-+.. .+ .+ ......|++.++|.|+
T Consensus 27 mkIt~v~~~~~-~~~~~~~v~V~v~Td~~Gi~G~GE~~~---~~---------------~~---~~~~~~i~~~l~p~Li 84 (440)
T 3t6c_A 27 LFITNVKTILT-APGGIDLVVVKIETNEPGLYGLGCATF---TQ---------------RI---YAVQSAIDEYLAPFLI 84 (440)
T ss_dssp CCEEEEEEEEE-CTTSSCEEEEEEEESSTTCEEEEECCC---GG---------------GH---HHHHHHHHTTHHHHHT
T ss_pred CEEEEEEEEEE-CCCCceEEEEEEEEcCCCCEEEEeecc---CC---------------CH---HHHHHHHHHHHHHHHc
Confidence 78999999755 4333368999999999 875 444321 01 11 2233456677999999
Q ss_pred cCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 79 KESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 79 ~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
|.|+.+...|-+.|...- -.....+..+|+.|+-+|+.=..++..|+|||+.|+ |.....+|
T Consensus 85 --G~dp~~ie~i~~~~~~~~-~~~~g~~~~~A~saID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~ 146 (440)
T 3t6c_A 85 --GKDPARIEDIWQSAAVSG-YWRNGPVMNNALSGIDMALWDIKGKQAGLPVYELLG---GKCRDGIA 146 (440)
T ss_dssp --TCCTTCHHHHHHHHHHTT-SCCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSSEE
T ss_pred --CCChhhHHHHHHHHHHhc-ccCCCcchhhHHHHHHHHHHHHHHHHcCCcHHHHcC---CCCCCeeE
Confidence 789999888877775431 000001113689999999999999999999999999 65433454
No 68
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=98.79 E-value=1.5e-06 Score=82.86 Aligned_cols=205 Identities=19% Similarity=0.180 Sum_probs=127.8
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+- .|+| ..++=|+|.|++|.. .|-+.. + ..|.|.++..+..
T Consensus 5 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~l~td~G~~G~GE~~~-----------~-----~~~~~e~~~~~~~ 68 (365)
T 3ik4_A 5 TTIQAISAEAINLPLTEPFAIASGAQAVAANVLVKVQLADGTLGLGEAAP-----------F-----PAVSGETQTGTSA 68 (365)
T ss_dssp TBEEEEEEEEEEEEBSCC--------CEEEEEEEEEEETTSCEEEEEECC-----------C-----CTTTCCCHHHHHH
T ss_pred CEEEEEEEEEEEEecCCCeEccCeEEEeeeEEEEEEEECCCCEEEEeccc-----------C-----CCcCcCCHHHHHH
Confidence 688888876552 4455 356888999998865 443221 1 1355666677777
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.++ .+.|.|+ |.++.+...+-+.|...-. ....|+.|+.+|+.-+.++..|+|||+.|+ |.. ..+|+
T Consensus 69 ~l~-~l~~~l~--G~d~~~~~~~~~~l~~~~~------~~~~a~said~ALwDl~gk~~g~Pl~~LLG---g~~-~~v~~ 135 (365)
T 3ik4_A 69 AIE-RLQSHLL--GADVRGWRKLAAMLDHAEH------EAAAARCGLEMAMLDALTRHYHMPLHVFFG---GVS-KQLET 135 (365)
T ss_dssp HHH-HHGGGTT--TCBGGGHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CSC-SEEEB
T ss_pred HHH-HHHHHHc--CCCccCHHHHHHHHHHHhc------ccHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cceee
Confidence 775 6899998 7899888877777755321 234789999999999999999999999998 653 33443
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
..-+ +..+..+..+ ++++.++. |. +-..+|. ++.++-++
T Consensus 136 --~~~~--------------------~~~~~e~~~~-------~a~~~~~~--G~~~iK~Kvg~--------~~~~~d~~ 176 (365)
T 3ik4_A 136 --DMTI--------------------TAGDEVHAAA-------SAKAILAR--GIKSIKVKTAG--------VDVAYDLA 176 (365)
T ss_dssp --CEEE--------------------CCSCHHHHHH-------HHHHHHHT--TCCCEEEECCS--------SCHHHHHH
T ss_pred --eEEe--------------------cCCCHHHHHH-------HHHHHHHc--CCCEEEEEeCC--------CCHHHHHH
Confidence 1111 1234433332 23333332 32 1112332 24567777
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHH-hcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFI-KEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~-~~yPIvsiEDp~~ 298 (299)
.+...-+.. +++.|.+|+ + ..+|.++-+.+...|. ++|+|.+||+|+.
T Consensus 177 ~v~avr~~~---~~~~l~vDa-------N---------------~~~~~~~A~~~~~~L~~~~~~i~~iEeP~~ 225 (365)
T 3ik4_A 177 RLRAIHQAA---PTAPLIVDG-------N---------------CGYDVERALAFCAACKAESIPMVLFEQPLP 225 (365)
T ss_dssp HHHHHHHHS---SSCCEEEEC-------T---------------TCCCHHHHHHHHHHHHHTTCCEEEEECCSC
T ss_pred HHHHHHHhC---CCCeEEEEC-------C---------------CCCCHHHHHHHHHHHhhCCCCceEEECCCC
Confidence 665443333 357888885 1 2356677777766664 6899999999985
No 69
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=98.77 E-value=1.8e-06 Score=82.90 Aligned_cols=205 Identities=17% Similarity=0.224 Sum_probs=128.1
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -+|+|. .++=|+|.|++|.. .|-++.. ..|.|.+......
T Consensus 3 MkI~~i~~~~~~~Pl~~p~~~a~~~~~~~~~~~V~v~td~G~~G~Ge~~~~----------------~~~~get~~~~~~ 66 (379)
T 3r0u_A 3 SKIIDIKTSIIKIPLKRTFITAVRSTNHIDSLAVELTLDNGVKGYGVAPAT----------------TAITGDTLQGMQY 66 (379)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECC----------------HHHHCCCHHHHHH
T ss_pred CEEEEEEEEEEEeecCCceEccCceEEEeEEEEEEEEECCCCEEEEEEECC----------------CCccCCCHHHHHH
Confidence 68999976533 355553 56788999999875 5544321 0244555666677
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.|++.++|.|+ |.++.+...+-+.|...- ..-..|+.|+-+|+.-+.++..|+|||+.|+ |. ...+|+
T Consensus 67 ~i~~~l~p~l~--G~d~~~~~~~~~~~~~~~------~~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g~-r~~v~~ 134 (379)
T 3r0u_A 67 IIREIFAPVIL--GSDLSDYKQTLELAFKKV------MFNSAAKMAIDLAYHDLLAKEQDISVAKLLG---AK-ANSIVT 134 (379)
T ss_dssp HHHHTTHHHHT--TCBGGGHHHHHHHHHTTC------SSCHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CC-CCEEEB
T ss_pred HHHHHhHHHhc--CCCcccHHHHHHHHHHhc------ccchHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCeEEE
Confidence 78888999998 788887766655544321 1234689999999999999999999999998 64 334443
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCC--CcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLD--ATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~--~t~vgdeGgfap~~~~~e~aL~ 225 (299)
..-+ | ..+.++.++ ++++.+. .|.. -..+|. ++++-++
T Consensus 135 --y~t~--g------------------~~~~e~~~~-------~a~~~~~--~Gf~~~KlK~g~---------~~~~d~~ 174 (379)
T 3r0u_A 135 --DVSI--S------------------CGNVAETIQ-------NIQNGVE--ANFTAIKVKTGA---------DFNRDIQ 174 (379)
T ss_dssp --CEEE--C------------------CCCHHHHHH-------HHHHHHH--TTCCEEEEECSS---------CHHHHHH
T ss_pred --EEEe--c------------------CCCHHHHHH-------HHHHHHH--cCCCEEeeecCC---------CHHHHHH
Confidence 2211 1 123333322 3333333 2421 112331 4567777
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhc--CCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKE--YPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~--yPIvsiEDp~~ 298 (299)
.+...-+..| .++.|.+|+ ++ .+|.++-+.+. +.+++ |+|.+||+|+.
T Consensus 175 ~v~avR~a~g--~~~~L~vDa-------N~---------------~w~~~~A~~~~-~~l~~~~~~l~~iEeP~~ 224 (379)
T 3r0u_A 175 LLKALDNEFS--KNIKFRFDA-------NQ---------------GWNLAQTKQFI-EEINKYSLNVEIIEQPVK 224 (379)
T ss_dssp HHHHHHHHCC--TTSEEEEEC-------TT---------------CCCHHHHHHHH-HHHHTSCCCEEEEECCSC
T ss_pred HHHHHHHhcC--CCCeEEEeC-------CC---------------CcCHHHHHHHH-HHHhhcCCCcEEEECCCC
Confidence 7665555555 468888885 12 24556766554 45566 88999999985
No 70
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=98.76 E-value=1.8e-06 Score=83.99 Aligned_cols=118 Identities=19% Similarity=0.307 Sum_probs=81.8
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|....+ +.|+..|=|+|.|++|.. -|-+.. .|. .......|++.++|.|+
T Consensus 23 mkIt~v~~~~~--~~~~~~v~V~v~td~Gi~G~GE~~~---~~~------------------~~~~~~~i~~~l~p~Li- 78 (424)
T 3v3w_A 23 MKIVDAKVIVT--CPGRNFVTLKIVTDQGIYGIGDATL---NGR------------------EKSVVSYLEDYLIPVLI- 78 (424)
T ss_dssp CCEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCC---TTC------------------HHHHHHHHHHTHHHHHT-
T ss_pred CEEEEEEEEEE--cCCCCEEEEEEEECCCCEEEEeccC---CCC------------------hHHHHHHHHHHHHHHhc-
Confidence 78999998755 345578999999999975 444321 111 12234456777999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.|+.+...|-+.|...-- .....+...|+.|+-+|+.=..++..|+|||+.|+ |.....+|+
T Consensus 79 -G~dp~~ie~i~~~~~~~~~-~~~g~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~ 141 (424)
T 3v3w_A 79 -GRDPQQIEDIWQFFYRGAY-WRRGPVGMTALAAIDVALWDIKAKLANMPLYQLLG---GKSRERILS 141 (424)
T ss_dssp -TSCTTCHHHHHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHT---CCSCSSEEE
T ss_pred -CCChhhHHHHHHHHHhccc-cCCCchHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CcCCCceeE
Confidence 7899998888777754310 00001113589999999999999999999999999 754334443
No 71
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=98.76 E-value=3.2e-07 Score=87.62 Aligned_cols=214 Identities=19% Similarity=0.195 Sum_probs=125.6
Q ss_pred CceeeEEEeEE---------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHH
Q psy12655 1 MPISKIHARQI---------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAV 66 (299)
Q Consensus 1 ~~I~~v~ar~i---------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av 66 (299)
|+|++|+.+.+ -+|+|. ++|=|+|+|++|.. .|-+.. .. . -+ +-....
T Consensus 1 MkI~~i~~~~~~~Pl~~p~~~~a~~~~~~~~~v~V~v~td~G~~G~GE~~~-----------~~--~--~~---~~~~~~ 62 (372)
T 3tj4_A 1 MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGT-----------HA--H--LP---SDRLIT 62 (372)
T ss_dssp CBEEEEEEEEEEEECC------------EEEEEEEEEEETTSCEEEEEEEE-----------CC--C--HH---HHHHHH
T ss_pred CEEEEEEEEEEEecCCCCccCCCccccCceeEEEEEEEECCCCEEEEeccC-----------cc--c--cC---cHHHHH
Confidence 89999998865 345543 56889999999875 443221 00 0 01 112234
Q ss_pred HHHHHhHHHHHhcCCCCccchHHHHHHHHhhc---CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q psy12655 67 GFINNDIAPALLKESFEVTQQKEIDEFMIKLD---GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNI 143 (299)
Q Consensus 67 ~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lD---gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~ 143 (299)
..|++.++|.|+ |.|+.+..++-+.|.... |... ..+...|+.|+-+|+.-..|+..|+|||+.|+ |....
T Consensus 63 ~~i~~~l~p~li--G~d~~~~~~~~~~l~~~~~~~~~g~-~g~~~~A~said~AlwDl~gk~~g~Pv~~llG---g~~~~ 136 (372)
T 3tj4_A 63 SCISDCYAPLLL--GEDASDHSRLWTKLARYPSLQWVGR-AGITHLALAAVDVALWDIKAKKAGVPLWHYLG---GARTA 136 (372)
T ss_dssp HHHHHTTHHHHT--TSBTTCHHHHHHHHHTCHHHHTTCS-STHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCS
T ss_pred HHHHHHHHHHhC--CCChhhHHHHHHHHHHhhHhhcCCc-ccHHHHHHHHHHHHHHHHhccccCCcHHHHcC---CCCCC
Confidence 446668999999 789999888777775421 1100 01123688999999999999999999999998 65433
Q ss_pred ccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChH
Q psy12655 144 ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 144 ~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e 221 (299)
.+ |...-+ ||-. ..+..+.++. .++.+.. +|. +-..+|. .+++
T Consensus 137 ~v--~~y~s~-~~~~----------------~~~~~~~~~~-------a~~~~~~-~G~~~~K~Kvg~--------~~~~ 181 (372)
T 3tj4_A 137 GV--EAYNTD-IGWL----------------SFTLEDLLAG-------SARAVEE-DGFTRLKIKVGH--------DDPN 181 (372)
T ss_dssp CE--EEEECT-TCCT----------------TSCHHHHHHH-------HHHHHHT-TCCCEEEEECCC--------SSHH
T ss_pred Ce--EEEEec-CCcc----------------CCCHHHHHHH-------HHHHHHc-cCCCEEEEcCCC--------CCHH
Confidence 34 433221 1110 1234333332 2333331 131 1112321 1456
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+-++.+...-+..| .++.|.+|+ ++ .+|.+|.+++... +++|++.+||+|+.
T Consensus 182 ~d~~~v~avR~~~g--~~~~l~vDa-------n~---------------~~~~~~a~~~~~~-l~~~~i~~iEqP~~ 233 (372)
T 3tj4_A 182 IDIARLTAVRERVD--SAVRIAIDG-------NG---------------KWDLPTCQRFCAA-AKDLDIYWFEEPLW 233 (372)
T ss_dssp HHHHHHHHHHHHSC--TTCEEEEEC-------TT---------------CCCHHHHHHHHHH-TTTSCEEEEESCSC
T ss_pred HHHHHHHHHHHHcC--CCCcEEeeC-------CC---------------CCCHHHHHHHHHH-HhhcCCCEEECCCC
Confidence 67777665555555 468888885 12 2456776666554 68899999999985
No 72
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=98.74 E-value=5.6e-07 Score=87.41 Aligned_cols=118 Identities=21% Similarity=0.330 Sum_probs=82.1
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|....+ +.|+..|=|+|.|++|.. -|-+.. .|. .......|++.++|.|+
T Consensus 17 mkIt~v~~~~~--~~~~~~~~V~v~td~G~~G~GE~~~---~~~------------------~~~~~~~i~~~l~p~Li- 72 (418)
T 3r4e_A 17 MKITAARVIIT--CPGRNFVTLKIETDQGVYGIGDATL---NGR------------------ELSVVAYLQEHVAPCLI- 72 (418)
T ss_dssp CCEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCC---TTC------------------HHHHHHHHHHTHHHHHT-
T ss_pred CEEEEEEEEEE--cCCCcEEEEEEEECCCCEEEEeccC---CCC------------------hHHHHHHHHHHHHHHhc-
Confidence 89999998765 345678999999999975 444321 111 12234456777999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.|+.+...|-+.|...-- .....+...|+.|+-+|+.=..++..|+|||+.|+ |.....+|+
T Consensus 73 -G~dp~~ie~l~~~~~~~~~-~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~ 135 (418)
T 3r4e_A 73 -GMDPRRIEDIWQYVYRGAY-WRRGPVTMRAIAAVDMALWDIKAKMAGMPLYQLLG---GRSRDGIMV 135 (418)
T ss_dssp -TSCTTCHHHHHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSCSSEEE
T ss_pred -CCChhhHHHHHHHHHHhcc-cCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CccCCeeeE
Confidence 7899998888777754310 00001113588999999999999999999999999 754334444
No 73
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=98.74 E-value=1.2e-06 Score=84.27 Aligned_cols=213 Identities=16% Similarity=0.139 Sum_probs=129.0
Q ss_pred CceeeEEEeEEeCCCCC----eeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHH
Q psy12655 1 MPISKIHARQIFDSRGN----PTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIA 74 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~----pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~ 74 (299)
|+|++|..+.+=-.--. +.|=|+|.|++|.. .|-+ |.| + ...|.|..+ .+.+.++
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~V~v~td~G~~G~GE~~~~~-----------~---~p~~~~e~~-----~i~~~l~ 61 (391)
T 3gd6_A 1 MKITDLELHAVGIPRHTGFVNKHVIVKIHTDEGLTGIGEMSDFS-----------H---LPLYSVDLH-----DLKQGLL 61 (391)
T ss_dssp CCEEEEEEEEEEEEBTTSCEEEEEEEEEEETTSCEEEEEECCCS-----------S---SSSCCCCHH-----HHHHHHH
T ss_pred CEEEEEEEEEEecccCCCcccceEEEEEEECCCCEEEecccccc-----------C---CCccchhHH-----HHHHHHH
Confidence 89999999877321111 56899999999976 5543 221 0 013444444 4567799
Q ss_pred HHHhcCCCCccchHHHHHHHHhhcC-CCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEee
Q psy12655 75 PALLKESFEVTQQKEIDEFMIKLDG-TENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVI 153 (299)
Q Consensus 75 p~Li~~g~~~~dQ~~ID~~L~~lDg-T~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvi 153 (299)
|.|+ |.|+.+...+-+.|...-- +....+-+..|+.|+-+|+.-+.|+..|+|||+.|+ |.....+|+ ...+
T Consensus 62 p~li--G~d~~~~~~~~~~l~~~~~~~~~~~~g~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~v~~--y~t~ 134 (391)
T 3gd6_A 62 SILL--GQNPFDLMKINKELTDNFPETMYYYEKGSFIRNGIDNALHDLCAKYLDISVSDFLG---GRVKEKIKV--CYPI 134 (391)
T ss_dssp HHHT--TCCTTCHHHHHHHHHHHSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEB--CEEE
T ss_pred HHhC--CCCccCHHHHHHHHHHHhhhcccccCcchHHHHHHHHHHHHHHhcccCCcHHHHhC---CCcCCeEEe--eEEe
Confidence 9999 7899999888888865321 111111234688999999999999999999999998 654334443 2222
Q ss_pred cCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHHHHHHHH
Q psy12655 154 NGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLRLIVEAI 231 (299)
Q Consensus 154 nGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ll~eAi 231 (299)
. .|. ...+.++..+ +.++.++. |. +-..+|. ++++-++.+...-
T Consensus 135 ~--~~~--------------~~~~~e~~~~-------~a~~~~~~--G~~~~KiKvG~---------~~~~d~~~v~avR 180 (391)
T 3gd6_A 135 F--RHR--------------FSEEVESNLD-------VVRQKLEQ--GFDVFRLYVGK---------NLDADEEFLSRVK 180 (391)
T ss_dssp C--CCS--------------STTHHHHHHH-------HHHHHHHT--TCCEEEEECSS---------CHHHHHHHHHHHH
T ss_pred c--ccc--------------cCCCHHHHHH-------HHHHHHHc--CCCEEEEeeCC---------CHHHHHHHHHHHH
Confidence 1 000 0122222222 23333332 31 1112331 3567777665544
Q ss_pred HHcccccceEEE-eeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCe--eEeecCCC
Q psy12655 232 EKAGYTGKVEIG-MDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPI--VSIEDPML 298 (299)
Q Consensus 232 ~~ag~~~~i~ia-lD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPI--vsiEDp~~ 298 (299)
+..| .++.|. +|+ ++. +|.+|-+.+ .+.+++|++ .+||+|+.
T Consensus 181 ~a~g--~~~~l~~vDa-------n~~---------------~~~~~A~~~-~~~l~~~~i~~~~iEqP~~ 225 (391)
T 3gd6_A 181 EEFG--SRVRIKSYDF-------SHL---------------LNWKDAHRA-IKRLTKYDLGLEMIESPAP 225 (391)
T ss_dssp HHHG--GGCEEEEEEC-------TTC---------------SCHHHHHHH-HHHHTTCCSSCCEEECCSC
T ss_pred HHcC--CCCcEEEecC-------CCC---------------cCHHHHHHH-HHHHHhcCCCcceecCCCC
Confidence 4446 467788 886 122 455665554 556688998 99999986
No 74
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=98.74 E-value=6.2e-07 Score=87.29 Aligned_cols=118 Identities=19% Similarity=0.259 Sum_probs=80.5
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|+...+ ...+...|=|+|.|++|.. -|-+.. .+ .. ......|++.++|.|+
T Consensus 27 mkIt~v~~~~~-~~~~~~~v~V~v~td~Gi~G~GE~~~---~~---------------~~---~~~~~~i~~~l~p~Li- 83 (422)
T 3tji_A 27 VIIKNIECFIT-RPDRHNLVTVRVTTEQGITGHGCATF---QQ---------------RP---LAVKTLVDEYLQPLMI- 83 (422)
T ss_dssp CBEEEEEEEEE-CSSSSCEEEEEEEETTSCCEEEECCC---TT---------------SH---HHHHHHHHHTHHHHHT-
T ss_pred cEEEEEEEEEE-cCCCccEEEEEEEECCCCEEEEeccC---CC---------------CH---HHHHHHHHHHHHHHhC-
Confidence 78999998765 3323378999999999975 444321 01 11 2223456677999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
|.|+.+...+-+.|....- .....+..+|+.|+-+|+.=..++..|+|||+.|+ |.....+|
T Consensus 84 -G~dp~~ie~~~~~l~~~~~-~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~ 145 (422)
T 3tji_A 84 -GRDANNIEDLWQMMNVNAY-WRNGPLMNNAISGVDMALWDIKGQLAGMPLYQLFG---GKSRDAIP 145 (422)
T ss_dssp -TSBTTCHHHHHHHHHHTTS-SCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSCEE
T ss_pred -CCCcccHHHHHHHHHHhhh-ccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCCCCeEE
Confidence 7899998887777754310 00001123689999999999999999999999998 65433444
No 75
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=98.73 E-value=9.1e-07 Score=84.58 Aligned_cols=208 Identities=17% Similarity=0.202 Sum_probs=124.8
Q ss_pred CceeeEEEeEEeC-------CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHh
Q psy12655 1 MPISKIHARQIFD-------SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINND 72 (299)
Q Consensus 1 ~~I~~v~ar~ilD-------srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~ 72 (299)
|+|++|+.+.+=- +.+...|=|+|+|++|.. -|-. +.+.......|++.
T Consensus 3 MkI~~i~~~~~~~P~~~~~~~~~~~~~~V~v~td~G~~G~GE~-----------------------~~~~~~~~~~i~~~ 59 (374)
T 3sjn_A 3 LKITDIEVLHLRVPAMDADCEWGEDAVIVKVHTDKGIVGVGEA-----------------------DSSPLVVQACIEAP 59 (374)
T ss_dssp CBEEEEEEEEEESSCTTSCCCTTSEEEEEEEEETTSCEEEEEE-----------------------SSCHHHHHHHHHCC
T ss_pred cEEEEEEEEEEeccCcCCcCcccceEEEEEEEECCCCEEEEcC-----------------------CCChHHHHHHHHhh
Confidence 7899999998631 222334889999999864 3331 11223344556665
Q ss_pred --------HHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q psy12655 73 --------IAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNI 143 (299)
Q Consensus 73 --------i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~ 143 (299)
++|.|+ |.|+.+...+-+.|... .+... .-+...|+.|+-+|+.-..++..|+|||+.|+ |....
T Consensus 60 ~~~~~~~~l~p~li--G~d~~~~~~~~~~l~~~~~~~~~-~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---g~~r~ 133 (374)
T 3sjn_A 60 QTNFYCNGLKRLLI--GENALEIERLWNKMYWGSNYMGR-RGAGIHAISAIDIALWDIAGQFYGVPVHTLLG---GKYRD 133 (374)
T ss_dssp CSBTTBCCHHHHHT--TSBTTCHHHHHHHHHHHTTTTCS-SBHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCS
T ss_pred hccchHhHHHHHHc--CCCcccHHHHHHHHHHhhhhcCC-ccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcC---CCcCC
Confidence 999999 78999988887777542 22111 11223789999999999999999999999999 74433
Q ss_pred ccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChH
Q psy12655 144 ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 144 ~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e 221 (299)
.+|+ . +|-.. |.....+.+. .++.++. |. +-..+|..| .+++
T Consensus 134 ~v~~--y----~~~~~------------~~~~e~~~~~----------a~~~~~~--Gf~~iKlk~g~~g------~~~~ 177 (374)
T 3sjn_A 134 KIRC--Y----GTFIP------------ADKPEDNVAI----------VQGLKDQ--GFSSIKFGGGVMG------DDPD 177 (374)
T ss_dssp EEEE--E----EEECC------------CSSGGGGHHH----------HHHHHTT--TCSEEEEECTTTT------SCHH
T ss_pred ceeE--E----eccCC------------CCCHHHHHHH----------HHHHHHc--CCCEEEeccCCCC------CCHH
Confidence 4543 2 11100 1111122222 2222221 31 111233222 2467
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccC-HHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLP-ADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t-~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.++.+...-+..| .++.|.+|+- + .+| .+|-+.+. +.+++|++.+||+|+.
T Consensus 178 ~d~~~v~avR~a~g--~~~~l~vDan-------~---------------~~~d~~~A~~~~-~~l~~~~i~~iEqP~~ 230 (374)
T 3sjn_A 178 TDYAIVKAVREAAG--PEMEVQIDLA-------S---------------KWHTCGHSAMMA-KRLEEFNLNWIEEPVL 230 (374)
T ss_dssp HHHHHHHHHHHHHC--SSSEEEEECT-------T---------------TTCSHHHHHHHH-HHSGGGCCSEEECSSC
T ss_pred HHHHHHHHHHHHhC--CCCeEEEECC-------C---------------CCCCHHHHHHHH-HHhhhcCceEEECCCC
Confidence 77777655444446 4688888851 1 244 66766554 4557899999999985
No 76
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=98.73 E-value=6.7e-07 Score=86.59 Aligned_cols=117 Identities=21% Similarity=0.249 Sum_probs=82.1
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|....+ +.+.++.+=|+|.|++|.. -|-+... |+..++..+ + +.++|.|+
T Consensus 3 MkI~~i~~~~~-~~~~~~~~~V~v~td~G~~G~GE~~~~------------------~~~~~~~~~---i-~~l~p~li- 58 (409)
T 3go2_A 3 LKVVSVDTLCC-DAGWRNYHFVKLTTDEGIVGWSEFDEG------------------FGSPGVTAV---I-EQLGKRLV- 58 (409)
T ss_dssp CBEEEEEEEEE-ECSSSEEEEEEEEETTCCEEEEEECST------------------TTCTTHHHH---H-HHHHHHHT-
T ss_pred CEEEEEEEEEE-CCCCccEEEEEEEECCCCEEEEeecCC------------------CCcHHHHHH---H-HHHHHHhc-
Confidence 79999999865 6666788999999999975 4443211 222234333 3 35899999
Q ss_pred CCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.|+.+...+-+.|... .+. ...+...|+.|+-+|+.=..|+..|+|||+.|+ |.....+|+
T Consensus 59 -G~d~~~~e~~~~~~~~~~~~~--~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~ 121 (409)
T 3go2_A 59 -GASVMEHERFFAEAYCLTRPA--TGGVVSEGIGAIENALLDAKAKTLNVPCYELLG---GKLRDRVPV 121 (409)
T ss_dssp -TSBTTCHHHHHHHHHHHHGGG--CSHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSCSEEEE
T ss_pred -CCChhhHHHHHHHHHHHhccC--CchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcC---CCCCCeEEE
Confidence 78999988887777543 110 001112589999999999999999999999999 754344554
No 77
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=98.73 E-value=1.9e-06 Score=82.81 Aligned_cols=209 Identities=18% Similarity=0.216 Sum_probs=130.1
Q ss_pred CceeeEEEeEE--------e-CCCC-----CeeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHH
Q psy12655 1 MPISKIHARQI--------F-DSRG-----NPTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTK 64 (299)
Q Consensus 1 ~~I~~v~ar~i--------l-DsrG-----~pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~ 64 (299)
|+|++|..+.+ | .|+| ..++=|+|.|++|.. .|-+ |.|. .|++.....
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~~s~g~~~~~~~~~~V~v~td~G~~G~GE~~~~~~----------------~~~~e~~~~ 66 (386)
T 3fv9_G 3 LKITRIDIHRTDLPVRGGVYRLSGGREYHSYDATIVSIETDTGLTGWGESTPFGS----------------TYIAAHAGG 66 (386)
T ss_dssp CCEEEEEEEEEEEEBSSSCEEETTTEEESEEEEEEEEEEETTSCEEEEEECCSTT----------------SSSSCCHHH
T ss_pred CEEEEEEEEEEEeecCCCceEecCceEEeeeeEEEEEEEECCCCEEEEecccCCC----------------ccCcccHHH
Confidence 78999998766 2 2445 357889999999875 4433 2211 244444555
Q ss_pred HHHHHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q psy12655 65 AVGFINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNI 143 (299)
Q Consensus 65 Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~ 143 (299)
+...++ .++|.|+ |.|+.+-..+-+.|... .| ...|+.|+-+|+.-..++..|+|||+.|+ |....
T Consensus 67 ~~~~l~-~l~~~l~--G~d~~~~~~~~~~l~~~~~g-------~~~A~said~ALwDl~gk~~g~Pv~~LLG---g~~~~ 133 (386)
T 3fv9_G 67 TRAALE-LLAPAIL--GMDPRQHDRIWDRMRDTLKG-------HRDARAALDIACWDIAAQAAGLPLCDMTG---GRVAG 133 (386)
T ss_dssp HHHHHH-HHHHHHT--TSCTTCHHHHHHHHHHHCSS-------CHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCCSS
T ss_pred HHHHHH-HHHHHhC--CCCcCCHHHHHHHHHHHhcC-------cHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCC
Confidence 566665 4899998 78999888777777543 22 24689999999999999999999999998 65433
Q ss_pred ccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChH
Q psy12655 144 ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 144 ~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e 221 (299)
.+|+ ..-+. ..+.++..+ ++++.+.. |. +-..+|..+ . -.+++
T Consensus 134 ~v~~--y~s~~--------------------~~~~e~~~~-------~a~~~~~~--G~~~~K~Kvg~~~---~-~~~~~ 178 (386)
T 3fv9_G 134 PVPV--ISSIG--------------------GDTPEAMRA-------KVARHRAQ--GFKGHSIKIGASE---A-EGGPA 178 (386)
T ss_dssp CBCE--EEEEC--------------------SCCHHHHHH-------HHHHHHHT--TCCEEEEECCCCT---T-TTHHH
T ss_pred ceee--eEecC--------------------CCCHHHHHH-------HHHHHHHC--CCCEEEEeccCCC---C-CCCHH
Confidence 4443 22221 123333332 22333321 31 111233111 1 12456
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+-++.+...-+..| .++.|.+|+ + ..+|.+|.+.+...|-+.|++ +||+|+.
T Consensus 179 ~d~~~v~avR~a~G--~~~~L~vDa-------N---------------~~~~~~~A~~~~~~l~~~~~i-~iEeP~~ 230 (386)
T 3fv9_G 179 LDAERITACLADRQ--PGEWYLADA-------N---------------NGLTVEHALRMLSLLPPGLDI-VLEAPCA 230 (386)
T ss_dssp HHHHHHHHHTTTCC--TTCEEEEEC-------T---------------TCCCHHHHHHHHHHSCSSCCC-EEECCCS
T ss_pred HHHHHHHHHHHHcC--CCCeEEEEC-------C---------------CCCCHHHHHHHHHHhhccCCc-EEecCCC
Confidence 67776654433345 468889995 1 125567877777666578999 9999985
No 78
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=98.73 E-value=9.9e-07 Score=84.74 Aligned_cols=207 Identities=19% Similarity=0.233 Sum_probs=124.5
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+ -+|+|. +.+=|+|.|++|.. .|-+.. +. .+...++.
T Consensus 27 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~-----------~~---------~~~~~~~~ 86 (383)
T 3toy_A 27 AAITGVTARAVITPMKRPLRNAFGVIDSGPLVLIDVTTDQGVTGHSYLFA-----------YT---------RLALKPLV 86 (383)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEESSSCEEEEEEEC-----------SS---------GGGHHHHH
T ss_pred CEEEEEEEEEEeccCCCcccCccccccceeEEEEEEEECCCCEEEEEeeC-----------CC---------CchHHHHH
Confidence 68999988765 244543 56889999999875 553322 10 01233455
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhc-CCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLD-GTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
.+.+.++|.|+ |.++.+.. +-+.|...- -..+. .+...|+.|+-+|+.-+.|+..|+|||+.|+ |.. . +
T Consensus 87 ~i~~~l~p~l~--G~d~~~~e-~~~~l~~~~~~~g~~-g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~--~ 156 (383)
T 3toy_A 87 HLVEDIGRELA--GKALVPVD-LMKAMDAKFRLLGWQ-GLVGMAVSGLDMAFWDALGQLAGKPVVELLG---GSA-R--P 156 (383)
T ss_dssp HHHHHHHHHTT--TCBCCHHH-HHHHHHHHTTTTCCS-THHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCC-C--C
T ss_pred HHHHHHHHHhC--CCCCCcHH-HHHHHHHHHhhcCCc-chHHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-C--c
Confidence 56677999998 78888876 666664421 11110 0113689999999999999999999999998 643 2 3
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL 224 (299)
+|...- +| ..+.++..+ ++++.++. +|. +-..+|. .++++-+
T Consensus 157 v~~y~s--~g------------------~~~~e~~~~-------~a~~~~~~-~G~~~~KlKvG~--------~~~~~d~ 200 (383)
T 3toy_A 157 IPAYDS--YG------------------VLDARDDER-------TLRTACDE-HGFRAIKSKGGH--------GDLATDE 200 (383)
T ss_dssp EEEEEE--CS------------------SCCHHHHHH-------HHHHHHHT-SCCCEEEEECCS--------SCHHHHH
T ss_pred eEEeEe--cC------------------CCCHHHHHH-------HHHHHHHc-cCCcEEEEecCC--------CCHHHHH
Confidence 344322 12 123333333 22333331 131 1112321 2456667
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+ ++ .+|.+|-+++.. .+++|+|.+||+|+.
T Consensus 201 ~~v~avR~a~G--~~~~l~vDa-------N~---------------~~~~~~A~~~~~-~l~~~~i~~iEeP~~ 249 (383)
T 3toy_A 201 AMIKGLRALLG--PDIALMLDF-------NQ---------------SLDPAEATRRIA-RLADYDLTWIEEPVP 249 (383)
T ss_dssp HHHHHHHHHHC--TTSEEEEEC-------TT---------------CSCHHHHHHHHH-HHGGGCCSEEECCSC
T ss_pred HHHHHHHHHhC--CCCeEEEeC-------CC---------------CCCHHHHHHHHH-HHHhhCCCEEECCCC
Confidence 76655444456 468888885 11 245667666555 557899999999985
No 79
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=98.73 E-value=9.8e-07 Score=84.70 Aligned_cols=204 Identities=13% Similarity=0.152 Sum_probs=122.8
Q ss_pred CceeeEEEeEEe--------CCCCCe-----eEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 1 MPISKIHARQIF--------DSRGNP-----TVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG~p-----Tvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
|+|++|+.+.+= +|+|.. ++=|+|.|++|.. .|-+ |.+. |. .+...+
T Consensus 8 mkI~~i~~~~~~~Pl~~p~~~s~g~~~~~~~~~~V~v~td~G~~G~GE~~~~~~-----------------~~-e~~~~~ 69 (385)
T 3i6e_A 8 QKIIAMDLWHLALPVVSARDHGIGRVEGSCEIVVLRLVAEGGAEGFGEASPWAV-----------------FT-GTPEAS 69 (385)
T ss_dssp SBEEEEEEEEEECCC--------------CEEEEEEEEETTSCEEEEEECCCTT-----------------TT-CCHHHH
T ss_pred cEEEEEEEEEEecccCCCeeccCcEEeceeeEEEEEEEECCCCEEEEeeccCCC-----------------cC-CCHHHH
Confidence 678999877652 455543 6889999999875 4433 2211 11 234566
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
...|++.++|.|+ |.++.+...+-+.|...- +-...|+.|+-+|+.-+.++..|+|||+.|+ |.....+
T Consensus 70 ~~~i~~~l~p~l~--G~d~~~~~~~~~~l~~~~------~~~~~A~said~ALwDl~gk~~g~Pl~~LLG---g~~r~~v 138 (385)
T 3i6e_A 70 YAALDRYLRPLVI--GRRVGDRVAIMDEAARAV------AHCTEAKAALDSALLDLAGRISNLPVWALLG---GKCRDTI 138 (385)
T ss_dssp HHHHHHTTHHHHT--TCBGGGHHHHHHHHHHHS------SSCHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEE
T ss_pred HHHHHHHHHHHHC--CCCccCHHHHHHHHHHHh------cCCHHHHHHHHHHHHHHHHHHcCCcHHHHhC---cccCCce
Confidence 6778888999998 789988877777665431 1124689999999999999999999999998 6543445
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~a 223 (299)
|+ ...+. ..+..+.++ ++++.+.+ |. +-..+|. .+.++-
T Consensus 139 ~~--~~t~~--------------------~~~~~~~~~-------~a~~~~~~--G~~~~K~Kvg~--------~~~~~d 179 (385)
T 3i6e_A 139 PL--SCSIA--------------------NPDFDADIA-------LMERLRAD--GVGLIKLKTGF--------RDHAFD 179 (385)
T ss_dssp EB--EEEEC--------------------CSSHHHHHH-------HHHHHHHH--TCCEEEEECSS--------SCHHHH
T ss_pred EE--EEEcC--------------------CCCHHHHHH-------HHHHHHHc--CCCEEEEecCC--------CCHHHH
Confidence 53 21111 113333322 22333332 31 1112331 234555
Q ss_pred HHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 224 LRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.+. |++++- +++.|.+|+ ++.| |.+|-+++. +.+++|+|.+||+|+.
T Consensus 180 ~~~v~-avR~a~--~~~~l~vDa-------n~~~---------------~~~~A~~~~-~~L~~~~i~~iEqP~~ 228 (385)
T 3i6e_A 180 IMRLE-LIARDF--PEFRVRVDY-------NQGL---------------EIDEAVPRV-LDVAQFQPDFIEQPVR 228 (385)
T ss_dssp HHHHH-HHHHHC--TTSEEEEEC-------TTCC---------------CGGGHHHHH-HHHHTTCCSCEECCSC
T ss_pred HHHHH-HHHHhC--CCCeEEEEC-------CCCC---------------CHHHHHHHH-HHHHhcCCCEEECCCC
Confidence 66554 444443 578899995 2223 345555554 4557899999999985
No 80
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=98.72 E-value=1.2e-06 Score=85.33 Aligned_cols=118 Identities=20% Similarity=0.296 Sum_probs=82.2
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|....+ +.|+..|=|+|.|++|.. -|-+.. .|. .......|++.++|.|+
T Consensus 24 mkIt~v~~~~~--~~~~~~v~V~v~td~G~~G~GE~~~---~~~------------------~~~~~~~i~~~l~p~Li- 79 (425)
T 3vcn_A 24 LKIIDAKVIVT--CPGRNFVTLKITTEDGITGVGDATL---NGR------------------ELSVVSFLQDHMVPSLI- 79 (425)
T ss_dssp CBEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCC---TTC------------------HHHHHHHHHHTTHHHHT-
T ss_pred CEEEEEEEEEE--cCCCcEEEEEEEECCCCEEEEeccC---CCC------------------hHHHHHHHHHHHHHHhC-
Confidence 79999998765 345678999999999975 444321 111 12234556777999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.|+.+...|-+.|...-- .....+...|+.|+-+|+.=..++..|+|||+.|+ |.....+|+
T Consensus 80 -G~dp~~ie~i~~~~~~~~~-~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~ 142 (425)
T 3vcn_A 80 -GRDAHQIEDIWQFFYRGSY-WRGGPVAMTALAAVDMALWDIKGKVAGLPVYQLLG---GACRTGVTV 142 (425)
T ss_dssp -TCBTTCHHHHHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTT---CCSSSSEEE
T ss_pred -CCChhhHHHHHHHHHhhcc-cCCchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcC---CCCCCeeeE
Confidence 7899998888777754310 00001113689999999999999999999999998 754334543
No 81
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=98.71 E-value=4.5e-07 Score=87.45 Aligned_cols=213 Identities=15% Similarity=0.140 Sum_probs=124.2
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+- +|+| ..++=|+|.|++|.. .|-+. .+ ..|.|.+...+..
T Consensus 27 mkI~~i~~~~~~~Pl~~p~~~a~g~~~~~~~~~V~v~td~G~~G~GE~~-----------~~-----~~~~~e~~~~~~~ 90 (393)
T 3u9i_A 27 TTIRALTVAPLDIPLHEPFGIASGAQEVARNLLVAVELTDGTRGYGEAA-----------PF-----PAFNGETQDMAHA 90 (393)
T ss_dssp TBEEEEEEEEEEEEBCC----------EEEEEEEEEEETTSCEEEEEEC-----------CC-----HHHHSCCHHHHHH
T ss_pred cEEEEEEEEEEEEecCCceEccCceEEeeeEEEEEEEECCCCEEEEEee-----------CC-----CCcCcCCHHHHHH
Confidence 678888876553 3444 356778999998864 44322 11 1355666777777
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.++ .+.|.|+ |.++.+...+-+.|.... .....|+.|+-+|+.-..++..|+|||+.|+ |.. ..+|+
T Consensus 91 ~l~-~l~p~l~--G~d~~~~~~~~~~l~~~~------~~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~~v~~ 157 (393)
T 3u9i_A 91 AIL-AARSLVE--GADVREWRRIALALPALP------GMTGSARCAIETAILDALTRRARLPLWAFFG---GAA-TSLET 157 (393)
T ss_dssp HHH-HTHHHHT--TSBGGGHHHHHHHGGGST------TCCHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CSC-SEEEC
T ss_pred HHH-HHHHHhc--CCCcCCHHHHHHHHHHhc------CccHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-CceEE
Confidence 775 5899998 788888777666664321 1235789999999999999999999999998 654 33443
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
- .- ++ ..+.++.. .++++.++. |. +-..+|...++.......++-++
T Consensus 158 ~--~t------------------~~--~~~~e~~~-------~~a~~~~~~--Gf~~iKlKvg~~~~~~~~~~~~~~di~ 206 (393)
T 3u9i_A 158 D--VT------------------IT--TGSVTAAA-------RAAQAIVAR--GVTTIKIKIGAGDPDATTIRTMEHDLA 206 (393)
T ss_dssp C--EE------------------EC-----CHHHH-------HHHHHHHTT--TCCEEEEECC-------CHHHHHHHHH
T ss_pred E--EE------------------ec--CCCHHHHH-------HHHHHHHHc--CCCeEEEEeCCCcccccccccHHHHHH
Confidence 1 00 11 11222222 233333332 31 11133332212111122455666
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHH-hcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFI-KEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~-~~yPIvsiEDp~~ 298 (299)
.+...-+.. +++.|.+|+ + ..+|.+|-+.+...|- +.|+|.+||+|+.
T Consensus 207 ~v~avR~a~---~d~~L~vDa--------------------N--~~w~~~~A~~~~~~L~~~~~~i~~iEeP~~ 255 (393)
T 3u9i_A 207 RIVAIRDVA---PTARLILDG--------------------N--CGYTAPDALRLLDMLGVHGIVPALFEQPVA 255 (393)
T ss_dssp HHHHHHHHS---TTSEEEEEC--------------------C--SCCCHHHHHHHHHTTTTTTCCCSEEECCSC
T ss_pred HHHHHHHHC---CCCeEEEEc--------------------c--CCCCHHHHHHHHHHHhhCCCCeEEEECCCC
Confidence 554433333 467888885 1 2356677777666553 6799999999985
No 82
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=98.71 E-value=4.4e-07 Score=86.16 Aligned_cols=205 Identities=19% Similarity=0.213 Sum_probs=127.1
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+ -.|+|. +++=|+|.|++|.. .|-+.. + ..|.|.+...+..
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~-----------~-----~~~~~e~~~~~~~ 64 (356)
T 3ro6_B 1 MKIADIQVRTEHFPLTRPYRIAFRSIEEIDNLIVEIRTADGLLGLGAASP-----------E-----RHVTGETLEACHA 64 (356)
T ss_dssp CBEEEEEEEEEEEEBC----------CEEEEEEEEEEETTSCEEEEEECC-----------C-----HHHHCCCHHHHHH
T ss_pred CEEEEEEEEEEEecccCCEEecCeEEEeeeEEEEEEEECCCCEEEecccC-----------C-----CCcCcCCHHHHHH
Confidence 89999998765 234553 56889999998864 443321 1 1245566677777
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.+++.+.|.|+ |.++.+...+-+.|...- ..-..|+.|+.+|+.-+.++..|+|||+.|+ |.. ..+|+
T Consensus 65 ~l~~~l~~~l~--G~~~~~~~~~~~~l~~~~------~~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~-~~v~~ 132 (356)
T 3ro6_B 65 ALDHDRLGWLM--GRDIRTLPRLCRELAERL------PAAPAARAALDMALHDLVAQCLGLPLVEILG---RAH-DSLPT 132 (356)
T ss_dssp HHCGGGCTTTT--TCBGGGHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHHHHHHTSBHHHHTC---CCC-SCEEB
T ss_pred HHHHHhHHHhc--CCCccCHHHHHHHHHHhh------ccchhHHHHHHHHHHHHHHHHcCCcHHHHhC---CCC-Cceee
Confidence 88888999998 788888777766664321 0124688999999999999999999999998 642 23443
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
..-+ +..+.++.++ +.++.+.. |. +-..+|. ++++-++
T Consensus 133 --~~~~--------------------~~~~~~~~~~-------~a~~~~~~--G~~~~K~K~G~---------~~~~d~~ 172 (356)
T 3ro6_B 133 --SVTI--------------------GIKPVEETLA-------EAREHLAL--GFRVLKVKLCG---------DEEQDFE 172 (356)
T ss_dssp --CEEE--------------------CSCCHHHHHH-------HHHHHHHT--TCCEEEEECCS---------CHHHHHH
T ss_pred --eEEE--------------------cCCCHHHHHH-------HHHHHHHc--CCCEEEEEeCC---------CHHHHHH
Confidence 2111 1123333322 22333331 32 1112331 4577777
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| .++.|.+|+ ++ .+|.++-+++. +.+++|+|.+||+|+.
T Consensus 173 ~v~avR~~~g--~~~~l~vDa-------n~---------------~~~~~~a~~~~-~~l~~~~i~~iEqP~~ 220 (356)
T 3ro6_B 173 RLRRLHETLA--GRAVVRVDP-------NQ---------------SYDRDGLLRLD-RLVQELGIEFIEQPFP 220 (356)
T ss_dssp HHHHHHHHHT--TSSEEEEEC-------TT---------------CCCHHHHHHHH-HHHHHTTCCCEECCSC
T ss_pred HHHHHHHHhC--CCCEEEEeC-------CC---------------CCCHHHHHHHH-HHHHhcCCCEEECCCC
Confidence 7665544445 468888885 12 24556766655 4557799999999985
No 83
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=98.70 E-value=7.6e-07 Score=86.26 Aligned_cols=210 Identities=18% Similarity=0.263 Sum_probs=126.0
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|..+.+ ..|-+=|+|.|++|.. -|-+.. .|. ...+.. .++ .++|.|+
T Consensus 2 MkIt~i~~~~~----~~~~~~V~v~td~G~~G~GE~~~---~g~---------------~~~~~~---~i~-~l~p~li- 54 (405)
T 3rr1_A 2 VKITRLTTYRL----PPRWMFLKVETDEGVTGWGEPVI---EGR---------------ARTVEA---AVH-ELSDYLI- 54 (405)
T ss_dssp CCEEEEEEEEE----TTTEEEEEEEETTSCEEEECCCC---TTC---------------HHHHHH---HHH-HHGGGTT-
T ss_pred CeEEEEEEEEE----CCCEEEEEEEECCCCEEEEeCCC---CCC---------------HHHHHH---HHH-HHHHHHC-
Confidence 89999999998 2456899999999875 443322 111 012333 333 3899999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCcCC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHA 159 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~ha 159 (299)
|.|+.+...+-+.|....- .....+...|+.|+-+|+.-..++..|+|||+.|+ |.....+|+ ..-+ |
T Consensus 55 -G~dp~~~e~~~~~l~~~~~-~~g~~~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~--y~~~--~--- 122 (405)
T 3rr1_A 55 -GQDPSRINDLWQTMYRAGF-YRGGPILMSAIAGIDQALWDIKGKVLGVPVYELLG---GLVRDKMRT--YSWV--G--- 122 (405)
T ss_dssp -TSCTTCHHHHHHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSCEEE--EEEC--C---
T ss_pred -CCCcccHHHHHHHHHHhhc-ccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---ccccCceee--eEeC--C---
Confidence 7899988777777754310 00001113588999999999999999999999998 653334443 3222 1
Q ss_pred CCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcc-cCCC-CCcCCCCCChHHHHHHHHHHHHHcccc
Q psy12655 160 GNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATA-VGDE-GGFAPNILDNKEGLRLIVEAIEKAGYT 237 (299)
Q Consensus 160 ~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~-vgde-Ggfap~~~~~e~aL~ll~eAi~~ag~~ 237 (299)
..+.++..+ ++++.+++ |..... +|.. .++.....+.++.++.+...-+..|
T Consensus 123 ---------------~~~~e~~~~-------~a~~~~~~--G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG-- 176 (405)
T 3rr1_A 123 ---------------GDRPADVIA-------GMKALQAG--GFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFG-- 176 (405)
T ss_dssp ---------------CSSHHHHHH-------HHHHHHHT--TCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTG--
T ss_pred ---------------CCCHHHHHH-------HHHHHHHc--CCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhC--
Confidence 223333322 22333332 421111 3322 2232222345666776655444445
Q ss_pred cceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 238 GKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 238 ~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.++.|.+|+ ++ .+|.+|-+.+.. .+++|.|.+||+|+.
T Consensus 177 ~d~~L~vDa-------N~---------------~~~~~~A~~~~~-~L~~~~i~~iEeP~~ 214 (405)
T 3rr1_A 177 NTVEFGLDF-------HG---------------RVSAPMAKVLIK-ELEPYRPLFIEEPVL 214 (405)
T ss_dssp GGSEEEEEC-------CS---------------CBCHHHHHHHHH-HHGGGCCSCEECSSC
T ss_pred CCceEEEEC-------CC---------------CCCHHHHHHHHH-HHHhcCCCEEECCCC
Confidence 468888885 12 245677666554 557899999999985
No 84
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=98.70 E-value=2e-06 Score=82.76 Aligned_cols=210 Identities=20% Similarity=0.177 Sum_probs=124.8
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -+|+|. +.+=|+|.|++|.. .|-+.. . . .+....+.
T Consensus 28 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~-----------~--------~-~~~~~~~~ 87 (390)
T 3ugv_A 28 LTFRKLTARPVLLKLQRPVTARIATIPDWPLILIDIETEEGVPGRAYLEP-----------Y--------V-PKAMKYLV 87 (390)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCCEEEEECC-----------S--------C-GGGHHHHH
T ss_pred CEEEEEEEEEEEecCCCCccCcccccccceEEEEEEEECCCCEEEEEeec-----------C--------C-CchHHHHH
Confidence 78999988765 355664 56889999998864 443221 1 0 01234455
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
.+.+.+.|.|+ |.++.+. .+-+.|... .-..+. .+...|+.|+-+|+.-+.|+..|+|||+.|+ |.. . +
T Consensus 88 ~~~~~l~p~li--G~d~~~~-~~~~~l~~~~~~~g~~-g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~-~--~ 157 (390)
T 3ugv_A 88 PALHDMSDMLA--GQPLAPA-EIYDKTRKSLHFVGYA-GLSMIAASGVDMAVWDALARAANMPLCTLLG---GTP-G--S 157 (390)
T ss_dssp HHHHHHHHHHT--TSBCCHH-HHHHHHHHHTGGGCSS-THHHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CCC-C--E
T ss_pred HHHHHHHHHHC--CCCcchH-HHHHHHHHHHHhhCCc-chHHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCC-C--c
Confidence 66678999999 7888887 666665432 100110 0113689999999999999999999999998 643 2 3
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhc--CC--CCcccCCCCCcCCCCCChHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKF--GL--DATAVGDEGGFAPNILDNKE 222 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~--G~--~~t~vgdeGgfap~~~~~e~ 222 (299)
+|....+ |+-. ..+.++.++ ++++.+.. + |. +-..+|. .++++
T Consensus 158 v~~y~s~-g~~~----------------~~~~e~~~~-------~a~~~~~~-~~~G~~~iKlKvG~--------~~~~~ 204 (390)
T 3ugv_A 158 VKAYNSN-GLWL----------------KSPAEVAAE-------AVELKAEG-QGTGFKGLKLRMGR--------DDPAV 204 (390)
T ss_dssp EEEEECS-CCCS----------------SCHHHHHHH-------HHHHHHTT-CTTCCSEEEEECCC--------SSHHH
T ss_pred eEEEEec-cccc----------------CCCHHHHHH-------HHHHHHHh-hhCCCcEEEEecCC--------CCHHH
Confidence 4433222 1100 123333322 23333331 1 31 1112331 24566
Q ss_pred HHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 223 GLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 223 aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
-++.+...-+..| .++.|.+|+ ++ .+|.+|-+++.. .+++|+|.+||+|+.
T Consensus 205 d~~~v~avR~a~G--~~~~l~vDa-------N~---------------~~~~~~A~~~~~-~l~~~~i~~iEqP~~ 255 (390)
T 3ugv_A 205 DIETAEAVWDAVG--RDTALMVDF-------NQ---------------GLDMAEAMHRTR-QIDDLGLEWIEEPVV 255 (390)
T ss_dssp HHHHHHHHHHHHC--TTSEEEEEC-------TT---------------CCCHHHHHHHHH-HHTTSCCSEEECCSC
T ss_pred HHHHHHHHHHHhC--CCCEEEEEC-------CC---------------CCCHHHHHHHHH-HHHhhCCCEEECCCC
Confidence 6776655444455 468888885 12 245567666555 457899999999985
No 85
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=98.70 E-value=1.2e-06 Score=81.95 Aligned_cols=151 Identities=15% Similarity=0.145 Sum_probs=91.4
Q ss_pred cHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC
Q psy12655 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN 140 (299)
Q Consensus 61 gv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~ 140 (299)
........++ .+.|.|+. |.++ ..+++++ + ..+++.|+++|++.+.|+..|+|||++|+ |.
T Consensus 57 ~~~~~~~~i~-~~~~~l~~-~~~~---~~~~~~~------~-----~~~a~~aid~AlwDl~~k~~g~Pl~~llG---g~ 117 (324)
T 1jpd_X 57 SDASVMAQIM-SVVPQLEK-GLTR---EELQKIL------P-----AGAARNALDCALWDLAARRQQQSLADLIG---IT 117 (324)
T ss_dssp CHHHHHHHHH-TTHHHHHT-TCCH---HHHHHHS------C-----SSHHHHHHHHHHHHHHHHTTTCCHHHHHT---CC
T ss_pred CHHHHHHHHH-HHHHHHhc-CCCH---HHHHHhC------c-----cHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CC
Confidence 3344455555 47788852 5544 3454442 1 35899999999999999999999999998 64
Q ss_pred CccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCC
Q psy12655 141 SNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNIL 218 (299)
Q Consensus 141 ~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~ 218 (299)
. ...|+|.+++ ++| +.++.++ .+++.+.+ |. +-..+|+ +
T Consensus 118 ~-~~~~~~~~~~-~~~--------------------~~e~~~~-------~a~~~~~~--G~~~~KiKvg~--------~ 158 (324)
T 1jpd_X 118 L-PETVITAQTV-VIG--------------------TPDQMAN-------SASTLWQA--GAKLLKVKLDN--------H 158 (324)
T ss_dssp C-CSEEEBCEEE-CSC--------------------CHHHHHH-------HHHHHHHT--TCSEEEEECCS--------S
T ss_pred C-CCCcceeEEe-eCC--------------------CHHHHHH-------HHHHHHHc--CCCEEEEEeCC--------c
Confidence 3 2467777764 222 2222221 22233221 31 1112342 1
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.++. .+||+++- +++.|.+|+ ++.|. .+|.+++. +.+++|+|.+||||+.
T Consensus 159 ---~d~~~-v~avr~~~--~~~~l~vDa-------N~~~~---------------~~~a~~~~-~~l~~~~i~~iEqP~~ 209 (324)
T 1jpd_X 159 ---LISER-MVAIRTAV--PDATLIVDA-------NESWR---------------AEGLAARC-QLLADLGVAMLEQPLP 209 (324)
T ss_dssp ---CHHHH-HHHHHHHC--TTSEEEEEC-------TTCCC---------------STTHHHHH-HHHHHTTCCEEECCSC
T ss_pred ---hHHHH-HHHHHHhC--CCCEEEEEC-------cCCCC---------------HHHHHHHH-HHHHhCCCCEEECCCC
Confidence 23443 34566653 589999997 23343 35666654 4678899999999986
No 86
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=98.70 E-value=1e-06 Score=84.32 Aligned_cols=203 Identities=19% Similarity=0.228 Sum_probs=124.3
Q ss_pred CceeeEEEeEEe--------CCCCC------eeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHH
Q psy12655 1 MPISKIHARQIF--------DSRGN------PTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTK 64 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG~------pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~ 64 (299)
|+|++|..+.+= .|+|. .++=|+|.|++|.. .|-+ |.|. .|.+.+...
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~----------------~~~~~~~~~ 66 (378)
T 3eez_A 3 LKITRITVYQVDLPLEHPYWLSGGRLKFELLDATLVKLETDAGITGWGEGTPWGH----------------TYVPAHGPG 66 (378)
T ss_dssp CCEEEEEEEEEEEEBSSCCC------CCCEEEEEEEEEEETTCCCEEEEECCSCS----------------SSSSCCHHH
T ss_pred cEEEEEEEEEEeccCCCceeecCCcceeeeeeEEEEEEEECCCCEEEecccCCCC----------------ccCCCcHHH
Confidence 789999988763 25563 56888999999865 4432 2211 244434455
Q ss_pred HHHHHHHhHHHHHhcCCCCccchHHHHHHHHh-hcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcc
Q psy12655 65 AVGFINNDIAPALLKESFEVTQQKEIDEFMIK-LDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNI 143 (299)
Q Consensus 65 Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~-lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~ 143 (299)
+...++ .++|.|+ |.++.+...+-+.|.. +.| ...|+.|+-+|+.-..|+..|+|||+.|+ |....
T Consensus 67 ~~~~l~-~l~p~l~--G~d~~~~~~~~~~l~~~~~g-------~~~A~said~ALwDl~gk~~g~Pl~~LlG---g~~r~ 133 (378)
T 3eez_A 67 IRAGIE-TMAPFVL--GLDPRRLLDVERAMDIALPG-------HLYAKSPIDMACWDIAGQAAGLPIADLMG---GGSRT 133 (378)
T ss_dssp HHHHHH-HHHHHHT--TSCTTCHHHHHHHHHHHSSS-------CHHHHHHHHHHHHHHHHHHTTSBHHHHTT---CCCCS
T ss_pred HHHHHH-HHHHHhc--CCCcCCHHHHHHHHHHHhcC-------cHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CCCCC
Confidence 555564 4899998 7899998888777754 322 23688999999999999999999999998 65433
Q ss_pred ccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChH
Q psy12655 144 ILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 144 ~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e 221 (299)
.+|+ ..-+ +..+..+..+ ++++.++ .|. +-..+|. +++
T Consensus 134 ~v~~--~~~~--------------------~~~~~e~~~~-------~a~~~~~--~G~~~iKiK~G~---------~~~ 173 (378)
T 3eez_A 134 PRPI--ASSV--------------------GAKSVEETRA-------VIDRYRQ--RGYVAHSVKIGG---------DVE 173 (378)
T ss_dssp CEEB--BCCB--------------------CSCCHHHHHH-------HHHHHHH--TTCCEEEEECCS---------CHH
T ss_pred eEEE--EEEe--------------------cCCCHHHHHH-------HHHHHHh--CCCCEEEeccCC---------CHH
Confidence 4544 1111 1123333322 2233332 232 1113331 467
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.++.+...-+..| .++.|.+|+ ++ .+|.+|.+++.. .+++|++ +||+|+.
T Consensus 174 ~d~~~v~avR~a~g--~~~~l~vDa-------n~---------------~~~~~~a~~~~~-~l~~~~i-~iEqP~~ 224 (378)
T 3eez_A 174 RDIARIRDVEDIRE--PGEIVLYDV-------NR---------------GWTRQQALRVMR-ATEDLHV-MFEQPGE 224 (378)
T ss_dssp HHHHHHHHHTTSCC--TTCEEEEEC-------TT---------------CCCHHHHHHHHH-HTGGGTC-CEECCSS
T ss_pred HHHHHHHHHHHHcC--CCceEEEEC-------CC---------------CCCHHHHHHHHH-HhccCCe-EEecCCC
Confidence 77777664333344 468888885 11 245567666555 4578999 9999984
No 87
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=98.66 E-value=2.1e-06 Score=82.65 Aligned_cols=110 Identities=13% Similarity=0.186 Sum_probs=78.5
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -+|+|. .++=|+|.|++|.. .|-+ ..+ ..|.|.+...+..
T Consensus 5 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~l~td~G~~G~GE~-----------~~~-----~~~~~e~~~~~~~ 68 (389)
T 3s5s_A 5 TLIRRVSIEALDIPLHEPFGIAGGAQERAANLLVTVELADGTLGFGEA-----------APL-----PAFNGETQDGSRA 68 (389)
T ss_dssp TBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEE-----------CCC-----HHHHSCCHHHHHH
T ss_pred CEEEEEEEEEEEEecCCceeccCceEEeeeEEEEEEEECCCCEEEEec-----------cCC-----CCcCccCHHHHHH
Confidence 67888876543 345553 46778888888864 3332 211 1355666666677
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.++ .+.|.|+ |.++.+...+-+.|... .+ .+..|+.|+-+|+.-..++..|+|||+.|+
T Consensus 69 ~l~-~l~~~l~--G~d~~~~~~~~~~l~~~~~~------~~~~A~said~ALwDl~gk~~g~Pl~~LLG 128 (389)
T 3s5s_A 69 AAV-SLREAVV--GSDARAWRAVARALREASGG------GAGAARCAIETAILDALTKRAGMPLWAFFG 128 (389)
T ss_dssp HHH-HTHHHHT--TSBGGGHHHHHHHHHHHHTT------CCHHHHHHHHHHHHHHHHHTTTCBHHHHTT
T ss_pred HHH-HHHHHhc--CCCccCHHHHHHHHHHhhcc------ChHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 775 5899998 78998887777766543 22 123799999999999999999999999998
No 88
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=98.66 E-value=1.5e-06 Score=82.83 Aligned_cols=204 Identities=17% Similarity=0.188 Sum_probs=127.5
Q ss_pred CceeeEEEeEE--------eCCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+ -.|+| ..++=|+|.|++|.. .|-+.. + ..|.|.+...+..
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~-----------~-----~~~~~e~~~~~~~ 64 (368)
T 3q45_A 1 MIITQVELYKSPVKLKEPFKISLGILTHANNVIVRIHTASGHIGYGECSP-----------F-----MTIHGESMDTAFI 64 (368)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCEEEEEECC-----------C-----HHHHSCCHHHHHH
T ss_pred CEEEEEEEEEEEeecCCCEEccCceEeeeeEEEEEEEECCCCEEEeeccC-----------C-----CCcCCCCHHHHHH
Confidence 88999988765 23455 356788899988865 443221 1 1244555555565
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc-c
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL-P 146 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l-P 146 (299)
.++ .+.|.|+ |.++.+...+-+.|...-. -...|+.|+-+|+.-..|+..|+|||+.|+ |... .+ |
T Consensus 65 ~~~-~l~~~l~--G~d~~~~~~~~~~l~~~~~------~~~~a~~aid~AlwDl~gk~~g~Pl~~llG---g~~~-~v~~ 131 (368)
T 3q45_A 65 VGQ-YLAKGLI--GTSCLDIVSNSLLMDAIIY------GNSCIKSAFNIALYDLAAQHAGLPLYAFLG---GKKD-KIIQ 131 (368)
T ss_dssp HHH-HHHHHHT--TSBTTCHHHHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCCC-SCEE
T ss_pred HHH-HHHHHhc--CCChhhHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCC-eeee
Confidence 554 6999998 7889888777766654311 123689999999999999999999999998 6532 33 3
Q ss_pred cceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHH
Q psy12655 147 VPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGL 224 (299)
Q Consensus 147 ~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL 224 (299)
+ -.. + +..+.++..+ +.++.+.. |. +-..+|. ++++-+
T Consensus 132 ~--~~~------------------~--~~~~~e~~~~-------~a~~~~~~--G~~~~K~KvG~---------~~~~d~ 171 (368)
T 3q45_A 132 T--DYT------------------V--SIDEPHKMAA-------DAVQIKKN--GFEIIKVKVGG---------SKELDV 171 (368)
T ss_dssp B--CEE------------------E--CSCCHHHHHH-------HHHHHHHT--TCSEEEEECCS---------CHHHHH
T ss_pred e--EEE------------------e--cCCCHHHHHH-------HHHHHHHc--CCCeEEEEecC---------CHHHHH
Confidence 2 100 1 1234433333 22333332 32 1112331 356777
Q ss_pred HHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 225 RLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 225 ~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+.+...-+..| .++.|.+|+ ++. +|.+|.+++...| ++|+|.+||+|+.
T Consensus 172 ~~v~avR~~~g--~~~~l~vDa-------N~~---------------~~~~~A~~~~~~l-~~~~i~~iEqP~~ 220 (368)
T 3q45_A 172 ERIRMIREAAG--DSITLRIDA-------NQG---------------WSVETAIETLTLL-EPYNIQHCEEPVS 220 (368)
T ss_dssp HHHHHHHHHHC--SSSEEEEEC-------TTC---------------BCHHHHHHHHHHH-GGGCCSCEECCBC
T ss_pred HHHHHHHHHhC--CCCeEEEEC-------CCC---------------CChHHHHHHHHHH-hhcCCCEEECCCC
Confidence 77765555556 468888884 122 4567777665544 7799999999985
No 89
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=98.66 E-value=1.9e-06 Score=83.18 Aligned_cols=111 Identities=20% Similarity=0.269 Sum_probs=84.5
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+= .|+| ..++=|+|.| +|.. .|-+.. +.. ..|.|..+..+..
T Consensus 7 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~lV~v~t-~G~~G~GE~~~-----------~~~---p~~~~et~~~~~~ 71 (400)
T 3mwc_A 7 ARIDGVSLYEIVIPMKIPFQISSGTCYTRRSLVVEIRE-GDLFGYGESAP-----------FEE---PFYLGETLETTKV 71 (400)
T ss_dssp CCCCEEEEEEEEEECSSCCCBTTBCCCEEEEEEEEEEE-TTEEEEEEECC-----------BSS---TTSTTCBHHHHHH
T ss_pred cEEEEEEEEEEeccccCceEccCceEeeeeEEEEEEEE-CCeEEEEeccc-----------CCC---CccccCcHHHHHH
Confidence 789999888762 3444 3568899999 8864 443321 110 1477778888888
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHh-hcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIK-LDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~-lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.+++.++|.|+ |.|+.+...+-+.|.. +.| +.-|+.|+-+|+.-+.|+..|+|||+.|+
T Consensus 72 ~i~~~l~p~li--G~d~~~~e~~~~~l~~~~~g-------~~~A~said~ALwDl~gk~~g~Pl~~LLG 131 (400)
T 3mwc_A 72 ILKNHLLPMIL--GKEPLSIEEFNHLIKNGIRG-------NHFARCGVENAYWDLIAKKNKISLKAMIE 131 (400)
T ss_dssp HHHHTHHHHHT--TCCCSSHHHHHHHHHHSCCS-------CHHHHHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred HHHHHHHHHHc--CCCCCCHHHHHHHHHHHhcC-------CHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 89989999999 7899998888888765 222 23489999999999999999999999998
No 90
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=98.65 E-value=1.4e-06 Score=83.76 Aligned_cols=112 Identities=17% Similarity=0.250 Sum_probs=82.4
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|+.+.+ -.|+|. .++=|+|.|++|.. .|-+.. +.. ..|.+..+..+..
T Consensus 1 MkI~~i~~~~~~lpl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~-----------~~~---p~~~~e~~~~~~~ 66 (388)
T 3qld_A 1 MSLQTCVLHRLSLPLKFPMRTAHGHIREKQAILVQLVDADGIEGWSECVA-----------LAE---PTYTEECTDTAWV 66 (388)
T ss_dssp -CEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSCEEEEEECC-----------CSS---TTSSSCCHHHHHH
T ss_pred CEEEEEEEEEEecccCCceEccceEEEeeeEEEEEEEECCCCEEEEeccc-----------CCC---CccccccHHHHHH
Confidence 78999988765 356664 56778999998865 443221 100 1466777888888
Q ss_pred HHHHhHHHHHh-------cCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALL-------KESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li-------~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.+++.+.|.|+ | .++.+...+.+.|..+.| ...|+.|+.+|+.-..++..|+|||+.|+
T Consensus 67 ~l~~~l~p~l~~~~~~~~G--~~~~~~~~~~~~~~~~~g-------~~~A~said~ALwDl~gk~~g~Pl~~LLG 132 (388)
T 3qld_A 67 MLVHHLVPRFARWLRAASQ--DQDVDPRTVCEALRDVRG-------NRMSVAAIEMAVWDWYAARTGQPLVGLLG 132 (388)
T ss_dssp HHHHTHHHHHHHHHTSGGG--SSCCCGGGGGGGGTTCCS-------CHHHHHHHHHHHHHHHHHHHTCCHHHHTT
T ss_pred HHHHHHHHHHhhhhcccCC--CCccCHHHHHHHHHHccC-------cHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 89999999998 6 466777777766644432 34688999999999999999999999998
No 91
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=98.63 E-value=3.4e-06 Score=81.47 Aligned_cols=210 Identities=17% Similarity=0.145 Sum_probs=123.0
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -+|+|. .++=|+|.|++|.. .|-+..| ..+..+
T Consensus 24 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~g---------------------~~~~~~-- 80 (398)
T 4dye_A 24 MKITDVDVWVVNLPLVNPFTSSFETKTGETRTVVRVRTDSGVEGWGETMWG---------------------APVAAI-- 80 (398)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECS---------------------HHHHHH--
T ss_pred ceEEEEEEEEEeecccccccccccccccceEEEEEEEECCCCEEEEeecCc---------------------hHHHHH--
Confidence 78999988766 346664 45789999999875 5544321 113333
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
+ +.++|.|+ |.++.+...+-+.|.... -...+.|..|+.|+-+|+.-..|+..|+|||+.|+ |.....+|+
T Consensus 81 -i-~~l~p~li--G~d~~~~~~~~~~l~~~~--~~~g~~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~v~~ 151 (398)
T 4dye_A 81 -V-RRMAPDLI--GTSPFALEAFHRKQHMVP--FFYGYLGYAAIAAVDVACWDAMGKATGQSVTDLLG---GAVRDEVPI 151 (398)
T ss_dssp -H-HHHHHHHT--TCCTTCHHHHHHHTTTHH--HHHHHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEEEB
T ss_pred -H-HHHHHHHc--CCCccCHHHHHHHHHhhh--hhhccccHHHHHHHHHHHHHHHHHHcCCcHHHHcC---CCcCCeEEE
Confidence 3 56899998 788988877776663210 00002355899999999999999999999999998 654344554
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~aL~ 225 (299)
=. +++.... ++ . ....+.++..+ ++++.+++ +|. +-..+| .++++-++
T Consensus 152 y~-s~~~~~~--~g-~---------~~~~~~e~~~~-------~a~~~~~~-~G~~~~K~KvG---------~~~~~d~~ 201 (398)
T 4dye_A 152 TA-LITRADA--PG-A---------TPADLPKAMAE-------HAVRVVEE-GGFDAVKLKGT---------TDCAGDVA 201 (398)
T ss_dssp EE-EECGGGS--TT-C---------CTTTHHHHHHH-------HHHHHHHH-HCCSEEEEECC---------SCHHHHHH
T ss_pred EE-EEecccc--CC-c---------ccCCCHHHHHH-------HHHHHHHh-cCCCEEEEecC---------CCHHHHHH
Confidence 22 2222110 00 0 00112222222 22333332 131 111233 13466666
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+.. ++++= +++.|.+|+ ++ .+|.+|-+.+.. .+++|+|.+||+|+.
T Consensus 202 ~v~a-vR~~~--~~~~l~vDa-------N~---------------~w~~~~A~~~~~-~l~~~~i~~iEqP~~ 248 (398)
T 4dye_A 202 ILRA-VREAL--PGVNLRVDP-------NA---------------AWSVPDSVRAGI-ALEELDLEYLEDPCV 248 (398)
T ss_dssp HHHH-HHHHC--TTSEEEEEC-------TT---------------CSCHHHHHHHHH-HHGGGCCSEEECCSS
T ss_pred HHHH-HHHhC--CCCeEEeeC-------CC---------------CCCHHHHHHHHH-HHhhcCCCEEcCCCC
Confidence 5543 44432 578899995 11 245667666554 557899999999984
No 92
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=98.62 E-value=1.9e-06 Score=83.05 Aligned_cols=104 Identities=22% Similarity=0.352 Sum_probs=74.9
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|..... .+.+=|+|.|++|.. -|-++. |.+ ......+.+.++|.|+
T Consensus 23 mkIt~v~~~~~-----~~~~~V~v~Td~G~~G~GE~~~-------------------~~~---~~~~~~i~~~l~p~Li- 74 (388)
T 3tcs_A 23 MKLKAIETFTN-----DAVGFVRVTTQDGAQGWGQVST-------------------YHA---DITCTVLHRQVAPWML- 74 (388)
T ss_dssp CBEEEEEEEEC-----SSCEEEEEEETTSCEEEEECCS-------------------SSH---HHHHHHHHHHTHHHHT-
T ss_pred cEEEEEEEEEe-----CCeEEEEEEECCCCEEEEeccC-------------------Ccc---HHHHHHHHHHHHHHhC-
Confidence 78888886542 356789999999975 444321 111 1223456778999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCCC----hhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCC
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFGA----NAILGVSLAVAKAGAAKKGVPLYKHLADLAGNS 141 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lGa----NailavSlA~akAaA~~~~~pLy~yi~~l~g~~ 141 (299)
|.|+.+...+-+.|....- ..++ .|+.|+-+|+.=..|+..|+|||+.|+ |..
T Consensus 75 -G~d~~~~e~l~~~~~~~~~-----~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---g~~ 131 (388)
T 3tcs_A 75 -GQDITDLDDLLDIVTEREH-----KFPGSYLRRAMAGVDTAIWDLRGKQQGKPVAEVLG---GTP 131 (388)
T ss_dssp -TSBCTTHHHHHHHHHHHTT-----TCCBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCC
T ss_pred -CCCcccHHHHHHHHHHhhh-----ccCCcHHHHHHHHHHHHHHHHHHhHcCCcHHHHhC---CCC
Confidence 7899998888777753210 1222 488999999999999999999999999 753
No 93
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=98.61 E-value=2.2e-06 Score=83.52 Aligned_cols=115 Identities=24% Similarity=0.340 Sum_probs=81.9
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|....+ ..+++.|=|+|.|++|.. -|-+.. +| .. ......|++.++|.|+
T Consensus 23 mkIt~v~~~~~--~~~~~~v~V~v~td~Gi~G~GE~~~---~g-----------------~~-~~~~~~l~~~l~p~Li- 78 (426)
T 4e4f_A 23 MKIVSAEVFVT--CPGRNFVTLKITTDSGLTGLGDATL---NG-----------------RE-LPVASYLNDHVCPQLI- 78 (426)
T ss_dssp CBEEEEEEEEE--CSSSCEEEEEEEETTSCEEEEECCC---TT-----------------CH-HHHHHHHHHTHHHHHT-
T ss_pred cEEEEEEEEEE--cCCCCEEEEEEEECCCCEEEEeccc---CC-----------------Cc-HHHHHHHHHHHHHHHc-
Confidence 88999998755 335678999999999975 544321 01 11 1234557778999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCC---ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFG---ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lG---aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.|+.+...+-+.|...- .-+-| ..|+.|+-+|+.=..++..|+|||+.|+ |.....+|+
T Consensus 79 -G~dp~~ie~i~~~l~~~~----~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~ 141 (426)
T 4e4f_A 79 -GRDAHQIEDIWQYFYKGA----YWRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLG---GASRTGVMV 141 (426)
T ss_dssp -TSBTTCHHHHHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHT---CCSSSSEEE
T ss_pred -CCChhhHHHHHHHHHhhc----cccCCccchhhHHHHHHHHHHHhHhHcCCcHHHHcC---CCCCCceeE
Confidence 789999888877775421 01112 2588999999999999999999999999 754334443
No 94
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=98.61 E-value=1.2e-06 Score=83.51 Aligned_cols=209 Identities=18% Similarity=0.196 Sum_probs=128.2
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF 68 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~ 68 (299)
|+|++|+.+.+= .|+| ...+=|+|. ++|.. |--|+..+. . ..|.+.+...+...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~-d~G~~----------G~GE~~~~~--~-~~~~~e~~~~~~~~ 66 (370)
T 1chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVY-SEGLV----------GVGEGGSVG--G-PVWSAECAETIKII 66 (370)
T ss_dssp CCCCCCCEECCCCCCCCCCTTCCSSCCCCCCEECCBC-SSSCB----------CCEECCCBT--T-BTTSSCCHHHHHHH
T ss_pred CEEEEEEEEEEEccCCCCeEccceEEeeeeEEEEEEE-ECCcE----------EEEccccCC--C-CCCCCCCHHHHHHH
Confidence 788888887662 2333 345667777 77753 333432221 1 13666777888888
Q ss_pred HHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 69 INNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 69 in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|++.++|.|+ |.++.+...+-+.|... .| ...|+.|+-+|+.-..++..|+|||+.|+ |.....+|+
T Consensus 67 i~~~l~p~l~--G~d~~~~~~~~~~l~~~~~g-------~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~v~~ 134 (370)
T 1chr_A 67 VERYLAPHLL--GTDAFNVSGALQTMARAVTG-------NASAKAAVEMALLDLKARALGVSIAELLG---GPLRSAIPI 134 (370)
T ss_dssp HHHHTHHHHT--TSCTTCHHHHHHHHHHHCSS-------CHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEB
T ss_pred HHHHHHHHHc--CCCcCCHHHHHHHHHHHhcC-------cHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CCCCCceeE
Confidence 8888999999 78999988887766543 22 23688999999999999999999999998 654445554
Q ss_pred ceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCC--CcccCCCCCcCCCCCChHHHHH
Q psy12655 148 PAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLD--ATAVGDEGGFAPNILDNKEGLR 225 (299)
Q Consensus 148 P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~--~t~vgdeGgfap~~~~~e~aL~ 225 (299)
...+..| +..+.++ +..+.+.+ .|.. -..+|. .++++-++
T Consensus 135 --~~t~~~~--------------------~~~~~~~-------~~~~~~~~-~G~~~~KiKvg~--------~~~~~d~~ 176 (370)
T 1chr_A 135 --AWTLASG--------------------DTKRDLD-------SAVEMIER-RRHNRFKVKLGF--------RSPQDDLI 176 (370)
T ss_dssp --EEEECSS--------------------SHHHHHH-------HHHHHHHT-TCCCEEEEECSS--------SCSHHHHH
T ss_pred --EEEecCC--------------------CcHHHHH-------HHHHHHHH-CCCCEEEEecCC--------CCHHHHHH
Confidence 2112111 1122221 22233331 2321 112331 24567777
Q ss_pred HHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 226 LIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 226 ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
.+...-+..| .++.|.+|+ ++.| |.+|-+.+ .+.+++|+|.+||+|+.
T Consensus 177 ~v~avR~~~g--~~~~l~vDa-------n~~~---------------~~~~a~~~-~~~l~~~~i~~iEqP~~ 224 (370)
T 1chr_A 177 HMEALSNSLG--SKAYLRVDV-------NQAW---------------DEQVASVY-IPELEALGVELIEQPVG 224 (370)
T ss_dssp HHHHHHHHSS--TTCCEEEEC-------TTCC---------------CTTHHHHH-THHHHTTTEEEEECCSC
T ss_pred HHHHHHHhcC--CCCEEEEEC-------CCCC---------------CHHHHHHH-HHHHHhcCCCEEECCCC
Confidence 7655444445 457788885 2233 33454444 45667899999999985
No 95
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=98.60 E-value=1.1e-05 Score=77.72 Aligned_cols=218 Identities=17% Similarity=0.180 Sum_probs=127.3
Q ss_pred CceeeEEEeEEeC---CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH-----HHH
Q psy12655 1 MPISKIHARQIFD---SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF-----INN 71 (299)
Q Consensus 1 ~~I~~v~ar~ilD---srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~-----in~ 71 (299)
|+|++|..+.+-- ....++|=|+|.|++|.. -|-+... .+ .+..+++. +.+
T Consensus 5 mkI~~i~~~~v~~p~~~~~~~~~~V~v~td~G~~G~GE~~~~-----~~---------------~~~~~~~~~~~~~~~~ 64 (394)
T 3mqt_A 5 ANIVSVEFIPVNVAATNWSENTVIVKVTDENGVYGLGEADGP-----PE---------------CMKAFSEIENEHKWLN 64 (394)
T ss_dssp CCEEEEEEEEEECC-----CEEEEEEEEETTSCEEEEEECSC-----HH---------------HHHHHHTCCCCBTTBC
T ss_pred CeEeEEEEEEEecCCCCCCccEEEEEEEECCCCEEEEEECCc-----HH---------------HHHHHHhcccchhhHH
Confidence 7899999988731 234678999999999975 4443210 00 01111111 233
Q ss_pred hHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccce
Q psy12655 72 DIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPA 149 (299)
Q Consensus 72 ~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lG--aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~ 149 (299)
.++|.|+ |.|+.+...+-+.|.... ....+-| ..|+.|+-+|+.=..++..|+|||+.|+ |.....+| .
T Consensus 65 ~l~p~li--G~dp~~~e~~~~~l~~~~--~~~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~--~ 135 (394)
T 3mqt_A 65 NIKEAVI--GRDPLEFRANYNRMYDTT--KWIGMRGLGLFAISGIDMALYDLAGKQLGVPAYKLMG---GAQKAQLT--P 135 (394)
T ss_dssp CGGGGTT--TSCTTCHHHHHHHHHHHT--TTTCSSBHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCCSSSBC--C
T ss_pred HHHHHhC--CCChhHHHHHHHHHHHhh--hhhCCccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcC---CCCCCeEE--E
Confidence 5899999 789999888777775531 1111112 3578999999999999999999999999 75433444 3
Q ss_pred EEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCc---ccCCCCCcCCCCCChHHHHHH
Q psy12655 150 FNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDAT---AVGDEGGFAPNILDNKEGLRL 226 (299)
Q Consensus 150 ~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t---~vgdeGgfap~~~~~e~aL~l 226 (299)
..-+.+. ++ ...+..+.++ ++-...++.++ .|.... .+|.. ..+.++.++.
T Consensus 136 y~s~~~~--------------~~-~~~~~~~~i~---~~~~~a~~~~~--~G~~~~K~~k~g~~------~~~~~~d~~~ 189 (394)
T 3mqt_A 136 YFTLYPS--------------VA-ADATLSEIVE---AYKPLIAKAKE--RGAKAVKVCIIPND------KVSDKEIVAY 189 (394)
T ss_dssp EEECCCC--------------CC-TTCCHHHHHH---HHHHHHHHHHH--TTCSEEEEECCCCT------TSCHHHHHHH
T ss_pred EEEecCC--------------CC-CCcchhhhHH---HHHHHHHHHHH--cCCCEEEecccCCC------ccCHHHHHHH
Confidence 3222110 01 1123343332 11123333333 242111 23311 1356777777
Q ss_pred HHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCcc-CHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 227 IVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWL-PADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 227 l~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~-t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+...-+..| .++.|.+|+- + .+ |.+|-+.+.. .+++|.|.+||+|+.
T Consensus 190 v~avR~a~G--~d~~l~vDan-------~---------------~~~~~~~A~~~~~-~L~~~~i~~iEeP~~ 237 (394)
T 3mqt_A 190 LRELREVIG--WDMDMMVDCL-------Y---------------RWTDWQKARWTFR-QLEDIDLYFIEACLQ 237 (394)
T ss_dssp HHHHHHHHC--SSSEEEEECT-------T---------------CCSCHHHHHHHHH-HTGGGCCSEEESCSC
T ss_pred HHHHHHHhC--CCCeEEEECC-------C---------------CCCCHHHHHHHHH-HHhhcCCeEEECCCC
Confidence 765555556 4678888851 1 24 5677666554 557899999999985
No 96
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=98.55 E-value=3.7e-06 Score=81.44 Aligned_cols=115 Identities=18% Similarity=0.212 Sum_probs=78.7
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhc
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLK 79 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~ 79 (299)
|+|++|....+ + .+...|=|+|.|++|.. -|-+. +++ ......|.+.++|.|+
T Consensus 4 mkIt~v~~~~~-~-~~~~~~~V~v~td~G~~G~GE~~--------------------~~~---~~~~~~i~~~l~p~li- 57 (410)
T 3dip_A 4 PRITALRTIRL-P-ERPKLIWVEVETEDGLTGLGETF--------------------RGA---QAVEAVLHEQTAPAII- 57 (410)
T ss_dssp CBEEEEEEEEE-T-TEEEEEEEEEEETTSCEEEEEEE--------------------SCH---HHHHHHHHHTHHHHHT-
T ss_pred CeEEEEEEEEE-C-CCCCEEEEEEEECCCCEEEEeCC--------------------CCh---HHHHHHHHHHHHHHhc-
Confidence 78999998765 4 34678899999999864 33311 111 1233455667999999
Q ss_pred CCCCccchHHHHHHHHhhcCCCCcccCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 80 ESFEVTQQKEIDEFMIKLDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 80 ~g~~~~dQ~~ID~~L~~lDgT~nks~lG--aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.|+.+...+-+.|... ......-| ..|+.|+-+|+.=..++..|+|||+.|+ |.....+|+
T Consensus 58 -G~dp~~~e~~~~~~~~~--~~~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~ 121 (410)
T 3dip_A 58 -GRAAENITSISSELLNP--YVGFGSSSAEVRAASAVDIALWDLAGQRAGVPLHVALG---GAARDRVPV 121 (410)
T ss_dssp -TSBTTCHHHHHHHHTCC--SSSCSSCCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSCSEEEE
T ss_pred -CCCcchHHHHHHHHHHH--HHhhCCccHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CCcCCceeE
Confidence 78898877766666431 10111111 2578999999999999999999999999 754344554
No 97
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=98.54 E-value=6.6e-06 Score=79.23 Aligned_cols=205 Identities=19% Similarity=0.219 Sum_probs=124.3
Q ss_pred CceeeEEEeEEe---------CCCC----CeeEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 1 MPISKIHARQIF---------DSRG----NPTVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 1 ~~I~~v~ar~il---------DsrG----~pTvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
|+|++|..+.+= .|+| ..++=|+|.|++|.. .|-+ |.|. .|++.....+
T Consensus 23 MkI~~i~~~~~~~pl~~~p~~~s~g~~~~~~~~~V~i~td~G~~G~GE~~~~~~----------------~~~~~~~~~~ 86 (391)
T 4e8g_A 23 MKIAEIHVYAHDLPVKDGPYTIASSTVWSLQTTLVKIVADSGLAGWGETCPVGP----------------TYAPSHALGA 86 (391)
T ss_dssp CCEEEEEEEEEEC---------------CCEEEEEEEEETTSCEEEEEECCSST----------------TTSSCCHHHH
T ss_pred CEEEEEEEEEEeeeCCCCCcccccceeeeeeEEEEEEEECCCCEEEecCcCCCC----------------ccCCccHHHH
Confidence 789999987663 2334 356889999999875 4433 2211 2443334455
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhh-cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKL-DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNII 144 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~ 144 (299)
...+++ +.|.|+ |.++.+...+-+.|... .| ...|+.|+-+|+.-..|+..|+|||+.|+ |.....
T Consensus 87 ~~~l~~-l~p~l~--G~d~~~~~~~~~~l~~~~~g-------~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~~r~~ 153 (391)
T 4e8g_A 87 RAALAE-MAPGLI--GANPLQPLVLRRRMDGLLCG-------HNYAKAAIDIAAYDLMGKHYGVRVADLLG---GVAAER 153 (391)
T ss_dssp HHHHHH-HGGGGT--TCCTTCHHHHHHHHHTTCSS-------CHHHHHHHHHHHHHHHHHHHTCBGGGGTT---CCSCSE
T ss_pred HHHHHH-HHHHHC--CCCcCCHHHHHHHHHHHhcC-------cHHHHHHHHHHHHHHHHHHcCChHHHhcC---CCCCCc
Confidence 555655 899998 78998887777766442 11 13689999999999999999999999998 654334
Q ss_pred cccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCC--CcccCCCCCcCCCCCChHH
Q psy12655 145 LPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLD--ATAVGDEGGFAPNILDNKE 222 (299)
Q Consensus 145 lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~--~t~vgdeGgfap~~~~~e~ 222 (299)
+|+ ..-+ +..+.++..+ ++++.++. |.. -..+|. .++++
T Consensus 154 v~~--y~s~--------------------~~~~~e~~~~-------~a~~~~~~--G~~~~KlKvg~--------~~~~~ 194 (391)
T 4e8g_A 154 VPS--YYAT--------------------GIGQPDEIAR-------IAAEKVAE--GFPRLQIKIGG--------RPVEI 194 (391)
T ss_dssp EEC--CEEE--------------------CSCCHHHHHH-------HHHHHHHT--TCSEEEEECCS--------SCHHH
T ss_pred EEE--eEEc--------------------CCCCHHHHHH-------HHHHHHHc--CCcEEEEcCCC--------CCHHH
Confidence 544 2111 1123433333 22333332 321 112331 14567
Q ss_pred HHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 223 GLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 223 aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
-++.+...-+..| .+++.|.+|+ + ..+|.++-+.+. +.+++|++ +||+|++
T Consensus 195 d~~~v~avR~a~g-g~~~~L~vDa-------N---------------~~w~~~~A~~~~-~~L~~~~i-~iEeP~~ 245 (391)
T 4e8g_A 195 DIETVRKVWERIR-GTGTRLAVDG-------N---------------RSLPSRDALRLS-RECPEIPF-VLEQPCN 245 (391)
T ss_dssp HHHHHHHHHHHHT-TTTCEEEEEC-------T---------------TCCCHHHHHHHH-HHCTTSCE-EEESCSS
T ss_pred HHHHHHHHHHHhC-CCCCeEEEeC-------C---------------CCCCHHHHHHHH-HHHhhcCe-EEecCCc
Confidence 7776655445554 1357888886 1 124556665554 45578999 9999974
No 98
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=98.54 E-value=6.4e-06 Score=79.29 Aligned_cols=204 Identities=18% Similarity=0.224 Sum_probs=121.4
Q ss_pred CceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+= +|+| .+.+=|+|.|++|.. .|-+.+. ..+. |..+..+
T Consensus 10 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~-~~~~---------------~~~~~~~-- 71 (392)
T 3ddm_A 10 ITPARVRAHVFRYPVSTPVKTSFGTMHDRPAVLVEVEDSDGAVGWGEVWCN-FPAC---------------GAEHRAR-- 71 (392)
T ss_dssp BCCCEEEEEEEEEEC-----------CEEEEEEEEEECTTSCEEEEECCCC-SSTT---------------HHHHHHH--
T ss_pred CEEEEEEEEEEeccCCCcccCcCceeecceEEEEEEEECCCCEEEEEeccC-CCCC---------------chHHHHH--
Confidence 689999887663 2333 357889999999875 5544110 0010 1112222
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhh-------cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCC
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKL-------DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGN 140 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-------DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~ 140 (299)
.+++.++|.|+ |.|+.+...+-+.|... .| +. -.-..|+.|+-+|+.-+.|+..|+|||+.|+ |.
T Consensus 72 ~i~~~l~p~li--G~d~~~~~~~~~~l~~~~~~~~~~~g--~~-g~~~~A~said~ALwDl~gK~~g~Pl~~LLG---g~ 143 (392)
T 3ddm_A 72 LVETVLAPLLT--ARAFADPAQAFAHLEARTAVLAIQTG--EP-GPLAQAIAGLDIALCDLAARRAGQPLWAWLG---GS 143 (392)
T ss_dssp HHHHTHHHHHT--TSCBSSHHHHHHHHHHTTHHHHHHHT--CH-HHHHHHHHHHHHHHHHHHHHHTTCBHHHHTT---CS
T ss_pred HHHHHHHHHhC--CCCcCCHHHHHHHHHhhhhhhhhhcC--Cc-chHHHHHHHHHHHHHHHHHHHhCCcHHHHhC---CC
Confidence 35778999999 78999988877776543 11 10 0113688999999999999999999999998 65
Q ss_pred CccccccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCC
Q psy12655 141 SNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNIL 218 (299)
Q Consensus 141 ~~~~lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~ 218 (299)
. ..+| .... |. -| ..+.+..+ +.++. |. +-..+|.
T Consensus 144 ~-~~v~--~y~~--g~--------------~~---e~~~~~a~----------~~~~~--G~~~iKlK~g~--------- 180 (392)
T 3ddm_A 144 G-DRIG--VYAS--GI--------------NP---ENPEDVVA----------RKAAE--GYRAFKLKVGF--------- 180 (392)
T ss_dssp C-CEEE--EEEE--EE--------------CS---SSHHHHHH----------HHHHH--TCCCEEEECSS---------
T ss_pred C-Ccee--EEee--cC--------------CH---HHHHHHHH----------HHHHc--CCCEEEEecCC---------
Confidence 4 3444 3332 21 02 23333322 22221 31 1112331
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++++.++.+...-+..| .++.|.+|+ ++ .+|.+|-+.+ .+.+++|+|.+||+|+.
T Consensus 181 ~~~~d~~~v~avR~a~g--~~~~l~vDa-------N~---------------~~~~~~A~~~-~~~L~~~~i~~iEeP~~ 235 (392)
T 3ddm_A 181 DDARDVRNALHVRELLG--AATPLMADA-------NQ---------------GWDLPRARQM-AQRLGPAQLDWLEEPLR 235 (392)
T ss_dssp CHHHHHHHHHHHHHHHC--SSSCEEEEC-------TT---------------CCCHHHHHHH-HHHHGGGCCSEEECCSC
T ss_pred CHHHHHHHHHHHHHhcC--CCceEEEeC-------CC---------------CCCHHHHHHH-HHHHHHhCCCEEECCCC
Confidence 45677776655444446 467788885 12 2455665554 45667899999999985
No 99
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=98.53 E-value=6.1e-06 Score=80.98 Aligned_cols=117 Identities=15% Similarity=0.184 Sum_probs=80.5
Q ss_pred CceeeEEEeEEe-------CCCC-----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF-------DSRG-----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il-------DsrG-----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.|- ++.| ...+=|+|.|++|.. -|-++ ++.++..+
T Consensus 28 mkIt~i~~~~v~~p~~p~~~~~g~~~~~~~~~~V~v~td~G~~G~GE~~---------------------g~~~~~~~-- 84 (445)
T 3vdg_A 28 IRITGARVTPVAFADPPLLNTVGVHQPYALRAVIQLDTDAGLTGLGETY---------------------ADTVHLER-- 84 (445)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEC---------------------CCHHHHHH--
T ss_pred CEEEEEEEEEEecCCccccccccccccceeEEEEEEEECCCCeEEEeCC---------------------ChHHHHHH--
Confidence 789999998873 3333 234679999999875 44432 11124333
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhc-CCC---CcccCC--------ChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLD-GTE---NKSKFG--------ANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~---nks~lG--------aNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
|+ .++|.|+ |.|+.+...+-+.|...- +.. +...-| ..|+.|+-+|+.=..++..|+|||+.|+
T Consensus 85 -i~-~l~p~Li--G~d~~~ie~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG 160 (445)
T 3vdg_A 85 -LQ-AAAHAIV--GRSVFSTNVIRALISDALGGDRTGDGSGLAGMITSASVVDRVFSPFEVACLDVQGQVTGRPVSDLLG 160 (445)
T ss_dssp -HH-HHHHHHT--TCBTTCHHHHHHHHHHHHTSCCCSCCTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHTCBGGGGTT
T ss_pred -HH-HHHHHhC--CCChhhHHHHHHHHHHhhhcccccccccccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 33 5899999 789999988888876642 110 011112 2589999999999999999999999998
Q ss_pred hhhCCCcccccc
Q psy12655 136 DLAGNSNIILPV 147 (299)
Q Consensus 136 ~l~g~~~~~lP~ 147 (299)
|.....+|+
T Consensus 161 ---G~~r~~v~~ 169 (445)
T 3vdg_A 161 ---GAVRDAVPF 169 (445)
T ss_dssp ---CCSSSEEEB
T ss_pred ---CCCCCeEEE
Confidence 754445665
No 100
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=98.52 E-value=5.4e-06 Score=79.83 Aligned_cols=218 Identities=17% Similarity=0.169 Sum_probs=127.3
Q ss_pred CceeeEEEeEEeC---CCCCeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH-----HHH
Q psy12655 1 MPISKIHARQIFD---SRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF-----INN 71 (299)
Q Consensus 1 ~~I~~v~ar~ilD---srG~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~-----in~ 71 (299)
|+|++|..+.+-- ....+++=|+|.|++|.. -|-+..+ .+ .+..+++. +.+
T Consensus 10 mkI~~i~~~~v~~p~~~~~~~~~~V~v~td~G~~G~GE~~~~-----~~---------------~~~~~~~~~~~~~~~~ 69 (394)
T 3mkc_A 10 APIKSIEFIPVNYQASNWSQNTVVVKVTDENGVYGLGEADGS-----PD---------------AILAYANIETEHKWLT 69 (394)
T ss_dssp CCEEEEEEEEEEEC----CEEEEEEEEEETTSCEEEEEECSC-----HH---------------HHHHHHTCCCCBTTBC
T ss_pred CeEEEEEEEEEecCCCCCCccEEEEEEEECCCCeEEEEecCc-----HH---------------HHHHHHhcccchhhHH
Confidence 7899999988731 134578999999999975 4543311 00 01111111 233
Q ss_pred hHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccce
Q psy12655 72 DIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPA 149 (299)
Q Consensus 72 ~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lG--aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~ 149 (299)
.++|.|+ |.|+.+...+-+.|.... ....+-| ..|+.|+-+|+.=..++..|+|||+.|+ |.....+| .
T Consensus 70 ~l~p~li--G~dp~~~e~~~~~l~~~~--~~~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~--~ 140 (394)
T 3mkc_A 70 NITEKAI--GRLPIEINAIWDAMYDAT--QWQGMRGLGMFALSGIDMALYDLAGKQLGVPAYQLLG---GTNKDKVH--P 140 (394)
T ss_dssp CTTTTTT--TSCTTCHHHHHHHHHHHT--HHHHSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSEEC--C
T ss_pred HHHHHhC--CCChhHHHHHHHHHHHhh--hhcCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcC---CCcCCeeE--E
Confidence 4899999 789999888777775421 0000112 3588999999999999999999999999 65433343 3
Q ss_pred EEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCc---ccCCCCCcCCCCCChHHHHHH
Q psy12655 150 FNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDAT---AVGDEGGFAPNILDNKEGLRL 226 (299)
Q Consensus 150 ~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t---~vgdeGgfap~~~~~e~aL~l 226 (299)
..-+.+. ++ ...+..+.++ ++-...++.++ .|.... .+|.. ..+.++.++.
T Consensus 141 y~s~~~~--------------~~-~~~~~~~~~~---~~~~~a~~~~~--~G~~~~K~~k~g~~------~~~~~~d~e~ 194 (394)
T 3mkc_A 141 YLTLYPA--------------IP-VDASLDVAIK---GYAPLLEKAKA--HNIRAVKVCVPIKA------DWSTKEVAYY 194 (394)
T ss_dssp EEECCCS--------------CC--CCCHHHHHH---HHHHHHHHHHH--TTCSEEEEECCTTC------CCCHHHHHHH
T ss_pred EEecCCc--------------CC-CCcchhhhHH---HHHHHHHHHHH--cCCCEEEeCccCCC------ccCHHHHHHH
Confidence 3222110 00 1123333332 11123333333 242111 22311 1356777777
Q ss_pred HHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCcc-CHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 227 IVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWL-PADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 227 l~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~-t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+...-+..| .++.|.+|+ ++ .+ |.+|-+++... +++|.|.+||+|+.
T Consensus 195 v~avR~a~G--~d~~l~vDa-------N~---------------~~~~~~~A~~~~~~-L~~~~i~~iEeP~~ 242 (394)
T 3mkc_A 195 LRELRGILG--HDTDMMVDY-------LY---------------RFTDWYEVARLLNS-IEDLELYFAEATLQ 242 (394)
T ss_dssp HHHHHHHHC--SSSEEEEEC-------TT---------------CCCCHHHHHHHHHH-TGGGCCSEEESCSC
T ss_pred HHHHHHHhC--CCCeEEEeC-------CC---------------CCCCHHHHHHHHHH-hhhcCCeEEECCCC
Confidence 765555556 467888885 11 24 56777776554 57899999999985
No 101
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=98.52 E-value=1e-05 Score=79.32 Aligned_cols=117 Identities=15% Similarity=0.180 Sum_probs=80.8
Q ss_pred CceeeEEEeEEe-------CCCC--C---eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF-------DSRG--N---PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il-------DsrG--~---pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+- +++| + ..+=|+|.|++|.. .|-++. +.++..++
T Consensus 23 mkI~~i~~~~v~~P~~~~~~~~g~~~~~~~~~~V~v~td~G~~G~GE~~g---------------------~~~v~~~i- 80 (441)
T 3vc5_A 23 MLIREVRVTPVAFRDPPLLNAAGVHQPWALRTIVEVVTDEGITGLGETYG---------------------DLAHLEQV- 80 (441)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTCCEEEEEEEC---------------------CHHHHHHH-
T ss_pred cEEEEEEEEEEecCCcccccccCccccceeEEEEEEEECCCCEEEEeCCC---------------------hHHHHHHH-
Confidence 789999998873 3444 2 34788999999875 554431 11244443
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhc-CCC---CcccCC--------ChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLD-GTE---NKSKFG--------ANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~---nks~lG--------aNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
+ .++|.|+ |.|+.+-..+-+.|...- +.. +...-| ..|+-|+-+|+.=..++..|+|||+.|+
T Consensus 81 --~-~l~p~Li--G~d~~~~e~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG 155 (441)
T 3vc5_A 81 --R-AAAARLP--GLDVYALHRIYRRVADVVGANIVTDMHGLTGSSSRVKTVDRVFAAFEVACLDIQGKAAGRPVADLLG 155 (441)
T ss_dssp --H-HHHHTCT--TSBTTCHHHHHHHHHHHHTTCCCCCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT
T ss_pred --H-HHHHHhC--CCChhHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 3 4899999 789999888888776542 110 111112 1589999999999999999999999998
Q ss_pred hhhCCCcccccc
Q psy12655 136 DLAGNSNIILPV 147 (299)
Q Consensus 136 ~l~g~~~~~lP~ 147 (299)
|.....+|+
T Consensus 156 ---G~~rd~v~~ 164 (441)
T 3vc5_A 156 ---GKVRDAVPY 164 (441)
T ss_dssp ---CCSSSEEEB
T ss_pred ---CCCCCeEEE
Confidence 754445665
No 102
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=98.52 E-value=3.1e-06 Score=80.86 Aligned_cols=205 Identities=16% Similarity=0.213 Sum_probs=123.1
Q ss_pred CceeeEEEeEEe--------CCCCC----e-eEEEEEEECCCce-EEEe-ecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 1 MPISKIHARQIF--------DSRGN----P-TVEVDLTTELGLF-RAAV-PSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 1 ~~I~~v~ar~il--------DsrG~----p-Tvevev~~~~g~~-ra~~-psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
|+|++|+.+.+= +|+|. . .+=|+|.|++|.. .|-+ |.+. |. .+...+
T Consensus 6 ~kI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~-----------------~~-e~~~~~ 67 (377)
T 3my9_A 6 SVVERIRIFLVESPIKMARLQGVGNVKGSVKRVLLEVTSADGIVGWGEAAPWEV-----------------FT-GTPEAA 67 (377)
T ss_dssp CBEEEEEEEEEEECEEC----------CCEEEEEEEEEETTSCEEEEEECCC-----------------------CHHHH
T ss_pred CEEEEEEEEEEeccccCCeeccceEEEeeeeEEEEEEEECCCCEEEEecccCCC-----------------cC-CCHHHH
Confidence 678888876552 45553 4 7889999999875 4433 2210 11 234556
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIIL 145 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~l 145 (299)
...|++.++|.|+ |.++.+...+-+.|...- +-...|+.|+-+|+.-..++..|+|||+.|+ |.....+
T Consensus 68 ~~~i~~~l~p~li--G~d~~~~~~~~~~l~~~~------~~~~~A~said~AlwDl~gk~~g~Pl~~LLG---g~~r~~v 136 (377)
T 3my9_A 68 FSALDIYLRPLIL--GAPIKRVRELMARMDKML------VGHGEAKAAVEMALLDILGKATGLSVADLLG---GRVRDRI 136 (377)
T ss_dssp HHHHHTTTHHHHT--TCBTTCHHHHHHHHHHHS------CSCHHHHHHHHHHHHHHHHHHHTCBTTGGGT---CCSCSEE
T ss_pred HHHHHHHHHHHhC--CCCcCCHHHHHHHHHHHh------cCchhHHHHHHHHHHHHHHHHcCCcHHHHhC---CCCCCeE
Confidence 6677777999998 789998888777665431 1124689999999999999999999999998 6544445
Q ss_pred ccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCChHHH
Q psy12655 146 PVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILDNKEG 223 (299)
Q Consensus 146 P~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~~e~a 223 (299)
|+- .-+ . ..+..+.+ .+.++.+.+ |. +-..+|. .+.++-
T Consensus 137 ~~~--~t~------------------~--~~~~~~~~-------~~a~~~~~~--G~~~~K~Kvg~--------~~~~~d 177 (377)
T 3my9_A 137 PLS--FSI------------------A--DPDFDADL-------ERMRAMVPA--GHTVFKMKTGV--------KPHAEE 177 (377)
T ss_dssp EBC--EEE------------------C--CSSHHHHH-------HHHHHHTTT--TCCEEEEECSS--------SCHHHH
T ss_pred EEE--Eec------------------C--CCCHHHHH-------HHHHHHHHc--CCCEEEEccCC--------CcHHHH
Confidence 541 111 1 11333322 223333332 32 1112331 235666
Q ss_pred HHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 224 LRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 224 L~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
++.+...-+..| .++.|.+|+ ++.|. .++-++ +.+.+++|+|.+||+|+.
T Consensus 178 ~~~v~avR~~~g--~~~~l~vDa-------n~~~~---------------~~~A~~-~~~~l~~~~i~~iEqP~~ 227 (377)
T 3my9_A 178 LRILETMRGEFG--ERIDLRLDF-------NQALT---------------PFGAMK-ILRDVDAFRPTFIEQPVP 227 (377)
T ss_dssp HHHHHHHHHHHG--GGSEEEEEC-------TTCCC---------------TTTHHH-HHHHHHTTCCSCEECCSC
T ss_pred HHHHHHHHHHhC--CCCeEEEeC-------CCCcC---------------HHHHHH-HHHHHhhcCCCEEECCCC
Confidence 666654444445 568888885 23343 334444 345567799999999985
No 103
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=98.51 E-value=9.6e-06 Score=78.14 Aligned_cols=207 Identities=14% Similarity=0.110 Sum_probs=119.1
Q ss_pred CceeeEEEeEE-------eC---CCCCe-----eEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHH
Q psy12655 1 MPISKIHARQI-------FD---SRGNP-----TVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTK 64 (299)
Q Consensus 1 ~~I~~v~ar~i-------lD---srG~p-----Tvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~ 64 (299)
|+|++|..+.+ |. |+|.. ++=|+|.|+ |.. .|-+..+
T Consensus 12 mkI~~i~~~~v~~pl~~~f~~s~~~g~~~~~~~~~~V~i~td-G~~G~GE~~~~-------------------------- 64 (392)
T 3v5c_A 12 WKVEKIEFAKLTGERARSAGANGRIGVHGKSCTVDIARITID-GQTGYGSSIHM-------------------------- 64 (392)
T ss_dssp CBEEEEEEEEEEEEEEEEECBCSSSCCCEEEEEEEEEEEEET-TEEEEEECCSC--------------------------
T ss_pred cEEEEEEEEEEeeecCcccccccccCccCCCceeEEEEEEEc-CCEEEEeecCc--------------------------
Confidence 67887776655 33 36643 556788888 865 5544321
Q ss_pred HHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccc
Q psy12655 65 AVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNII 144 (299)
Q Consensus 65 Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~ 144 (299)
.+.++|.|+ |.++.+... . ...+...|+.|+-+|++=..++..|+|||+.|+ |.....
T Consensus 65 -----~~~l~~~li--G~d~~~~~~-------~-----~~~~~~~A~aaiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~ 122 (392)
T 3v5c_A 65 -----TPEWAEDVI--GRRLLDLFD-------D-----RGRLREAYRLQLEYPVLDWLGQRQGKPVYDLVS---GAHLET 122 (392)
T ss_dssp -----CHHHHHTTT--TCBGGGGBC-------T-----TSCBCGGGHHHHHHHHHHHHHHHHTCBHHHHHS---CCCSCC
T ss_pred -----HHHHHHHhC--CCCHHHHHh-------h-----ccchHHHHHHHHHHHHHHHHHHHhCCcHHHHcC---CCCCcc
Confidence 024789998 788865311 1 123445789999999999999999999999998 654322
Q ss_pred ---cccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChH
Q psy12655 145 ---LPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNK 221 (299)
Q Consensus 145 ---lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e 221 (299)
+++|+....-|-. + + -| ..+- +..+ ++-.+.++.++.-|..+-..+|..+.|.++..+.+
T Consensus 123 ~~~v~v~~y~~~~~~~--~--~-------~~--~~~~-~~~e---~~~~~a~~~~~~Gf~~~KlKvg~~~~~~~~~~~~~ 185 (392)
T 3v5c_A 123 GASLVVPCYDTSLYFD--D--L-------HL--ADER-AAVA---LMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTK 185 (392)
T ss_dssp CCCEEEEEEEEEECBT--T--T-------TC--CCHH-HHHH---HHHHHHHHHHHTTCCCEEEECCTTTTTSCHHHHHH
T ss_pred cccceEEEEEeecccc--c--c-------cc--cccc-cCHH---HHHHHHHHHHHCCCCEEEECCCCCCccccccccHH
Confidence 4577664321110 0 0 01 1111 1111 11223333333211112224565555555444456
Q ss_pred HHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 222 EGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 222 ~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+-++.+...=+..| +++.|.+|+ + ..+|.+|-+.+...| ++|.+.+||+|+.
T Consensus 186 ~d~~~v~avR~a~g--~~~~l~vDa--------------------N--~~w~~~~A~~~~~~L-~~~~l~~iEeP~~ 237 (392)
T 3v5c_A 186 RDIAIVRGISEVAG--PAGKIMIDA--------------------N--NAYNLNLTKEVLAAL-SDVNLYWLEAAFH 237 (392)
T ss_dssp HHHHHHHHHHHHHC--TTCCEEEEC--------------------T--TCCCHHHHHHHHHHT-TTSCCCEEECSSS
T ss_pred HHHHHHHHHHHHcC--CCCcEEeeC--------------------C--CCcCHHHHHHHHHhc-ccCCCeEEeCCCC
Confidence 66665544333356 468888886 1 235667766665555 7899999999985
No 104
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=98.45 E-value=1.1e-05 Score=79.00 Aligned_cols=116 Identities=12% Similarity=0.080 Sum_probs=78.1
Q ss_pred CceeeEEEeEEe-------CCCC--C---eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIF-------DSRG--N---PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~il-------DsrG--~---pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.|- ++.| . ..+=|+|.|++ .. -|-++ ++.++..++
T Consensus 27 mkIt~i~~~~v~~p~~p~~~~~g~~~~~~~~~~V~v~td~-~~G~GE~~---------------------g~~~~~~~i- 83 (445)
T 3va8_A 27 SIIKEIVITPVAFHDMPLLNSVGVHEPFALRSIIEIITED-SYGLGESY---------------------GDSAHLDRL- 83 (445)
T ss_dssp TBCCEEEEEEEEEECCCBEETTEECCSEEEEEEEEEECSS-CEEEEEEE---------------------CCHHHHHHH-
T ss_pred CEEEEEEEEEEecCCcccccccCcccCceeEEEEEEEECC-CEEEEecC---------------------CcHHHHHHH-
Confidence 789999998773 3333 1 23678888876 43 34332 112344443
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhc-CCC---CcccCC--------ChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLD-GTE---NKSKFG--------ANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lD-gT~---nks~lG--------aNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
+ .++|.|+ |.|+.+...|-+.|...- +.. ....-| ..|+.|+-+|+.=..++..|+|||+.|+
T Consensus 84 --~-~l~p~Li--G~d~~~ie~i~~~l~~~~~~~~~~~~~G~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLG 158 (445)
T 3va8_A 84 --Q-KAADKIK--GLSVYSTNVIYQRCVESLRNDTNTGGDGMGGMVVTASVADKVFSPFEVACLDLQGKLAGISVSDLLG 158 (445)
T ss_dssp --H-HHHHHHT--TSBTTCHHHHHHHHHHHTTTCCC--CCSSTTSSCCSCHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT
T ss_pred --H-HHHHHHC--CCChhHHHHHHHHHHHhhhcccccccccccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 3 4899999 789999988888876642 110 001112 2589999999999999999999999998
Q ss_pred hhhCCCcccccc
Q psy12655 136 DLAGNSNIILPV 147 (299)
Q Consensus 136 ~l~g~~~~~lP~ 147 (299)
|.....+|+
T Consensus 159 ---G~~r~~v~~ 167 (445)
T 3va8_A 159 ---GRVRDSVQY 167 (445)
T ss_dssp ---CCSSSEEEB
T ss_pred ---CCCCCeEEE
Confidence 754445665
No 105
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=98.44 E-value=1.2e-05 Score=77.64 Aligned_cols=117 Identities=17% Similarity=0.216 Sum_probs=78.7
Q ss_pred CceeeEEEeEEeCCCCCeeEEEEEEECCCceEEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcC
Q psy12655 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKE 80 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG~pTvevev~~~~g~~ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~ 80 (299)
|+|++|..+.+ + .....|=|+|+|++|.. |--|+ -+.+.++.. .+.+.++|.|+
T Consensus 1 MkIt~ie~~~~-~-~~~~~~~V~v~td~G~~----------G~GE~---------~~~~~~~~~---~i~~~l~p~li-- 54 (400)
T 4dxk_A 1 MKITKLETVRV-A-ERTNLLWVLVHTDEGIT----------GLGET---------FFGAETVET---YVHEYIAPRVI-- 54 (400)
T ss_dssp CCEEEEEEEEE-T-TSTTEEEEEEEETTSCC----------EEEEE---------ESCHHHHHH---HHHHTHHHHHT--
T ss_pred CeEEEEEEEEE-C-CCCCEEEEEEEECCCCE----------EEEcC---------CCCccHHHH---HHHHHHHHHhC--
Confidence 89999999877 3 34457889999999864 22221 012223333 34455999999
Q ss_pred CCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 81 SFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 81 g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
|.|+.+...+-+.|..+-|... ..+-..|+.|+-+|+.=..++..|+|||+.|+ |....++|+
T Consensus 55 G~dp~~~~~~~~~~~~~~~~~~-~g~~~~A~saiD~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~~ 117 (400)
T 4dxk_A 55 GRDPLQIDLLAQDLVGYLGFRS-SGAEVRGNSAFDIALWDIFGKATNQPIAQLLG---GFSRREIRT 117 (400)
T ss_dssp TSCTTCHHHHHHHHCCSSSCSS-CSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---CCSCSCEEE
T ss_pred CCCcchHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHHHHhHhHcCCcHHHHhC---CCccCceeE
Confidence 7899998877777721111000 00112688999999999999999999999999 754344554
No 106
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=98.43 E-value=9e-06 Score=78.09 Aligned_cols=208 Identities=17% Similarity=0.202 Sum_probs=124.2
Q ss_pred CceeeEEEeEEe----------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHH
Q psy12655 1 MPISKIHARQIF----------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKA 65 (299)
Q Consensus 1 ~~I~~v~ar~il----------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~A 65 (299)
|+|++|+.+.+= +|.| ++.+=|+|.|++|.. -|-+. | ++ +.+.++..+
T Consensus 3 MkI~~i~~~~~~~pl~~~~p~~~a~~~~~~~~~~~V~v~td~G~~G~GE~~-~--~~--------------~~~~~~~~~ 65 (389)
T 3ozy_A 3 LKITEVKAHALSTPIPERMRVESGAGLKLNRQMILVEVRTDEGVTGVGSPS-G--PY--------------DLAVLKRAI 65 (389)
T ss_dssp CCEEEEEEEEEEEECCGGGCCEETTEEBCEEEEEEEEEEETTSCCEEECCC-S--SS--------------CHHHHHHHH
T ss_pred CEEEEEEEEEEeccCcCCCcccccccccccceEEEEEEEECCCCEEEEecC-C--CC--------------CchHHHHHH
Confidence 789999988762 2222 467889999999864 33322 1 00 112234333
Q ss_pred HHHHHHhHHHHHhcCCCCccchHHHHHHHHhh---cCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCc
Q psy12655 66 VGFINNDIAPALLKESFEVTQQKEIDEFMIKL---DGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSN 142 (299)
Q Consensus 66 v~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l---DgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~ 142 (299)
++ .++|.|+ |.++.+...+-+.|... -+.... ..-..|+.|+-+|+.-+.++..|+|||+.|+ |...
T Consensus 66 ---i~-~l~p~l~--G~d~~~~~~~~~~l~~~~~~~~~g~~-~~~~~A~said~AlwDl~gK~~g~Pl~~LLG---g~~r 135 (389)
T 3ozy_A 66 ---ED-VIGPQLI--GEDPANINYLWHKVFHGEVSRNLGHR-SVGIAAMSGVDIALWDLKGRAMNQPIYQLLG---GKFH 135 (389)
T ss_dssp ---HH-TTHHHHT--TSCTTCHHHHHHHHHHHTHHHHHCSB-SHHHHHHHHHHHHHHHHHHHHHTCBHHHHTT---SCSS
T ss_pred ---HH-HHHHHHc--CCCcchHHHHHHHHHhhhhhhccCCc-hHHHHHHHHHHHHHHHHhHhHcCCCHHHHhC---Cccc
Confidence 34 4899998 78999988877777543 111110 1123588999999999999999999999998 6532
Q ss_pred cc-cccceEEeecCCcCCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCCCCCcCCCCCC
Q psy12655 143 II-LPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL--DATAVGDEGGFAPNILD 219 (299)
Q Consensus 143 ~~-lP~P~~nvinGG~ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l~~~l~~k~G~--~~t~vgdeGgfap~~~~ 219 (299)
.. +| ....+-| . ..+.++..+ ++++.++ .|. +-..+|. +
T Consensus 136 ~~~v~--~y~~~~~-----------------~-~~~~e~~~~-------~a~~~~~--~G~~~iKiKvG~---------~ 177 (389)
T 3ozy_A 136 TRGVR--AYASSIY-----------------W-DLTPDQAAD-------ELAGWVE--QGFTAAKLKVGR---------A 177 (389)
T ss_dssp TTCEE--EEEEEEC-----------------S-SCCHHHHHH-------HHHHHHH--TTCSEEEEECCS---------C
T ss_pred CCcee--eEEecCC-----------------C-CCCHHHHHH-------HHHHHHH--CCCCEEeeccCC---------C
Confidence 23 33 3332211 0 223333322 2233332 232 1112332 5
Q ss_pred hHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 220 NKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 220 ~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+++.++.+...-+..| .++.|.+|+ ++ .+|.+|-+++.. .+++|+|.+||+|+.
T Consensus 178 ~~~d~~~v~avR~a~g--~d~~l~vDa-------n~---------------~~~~~~A~~~~~-~l~~~~i~~iEqP~~ 231 (389)
T 3ozy_A 178 PRKDAANLRAMRQRVG--ADVEILVDA-------NQ---------------SLGRHDALAMLR-ILDEAGCYWFEEPLS 231 (389)
T ss_dssp HHHHHHHHHHHHHHHC--TTSEEEEEC-------TT---------------CCCHHHHHHHHH-HHHHTTCSEEESCSC
T ss_pred HHHHHHHHHHHHHHcC--CCceEEEEC-------CC---------------CcCHHHHHHHHH-HHHhcCCCEEECCCC
Confidence 6777777766555556 467888885 11 245677666554 557899999999985
No 107
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=98.38 E-value=3.1e-05 Score=75.80 Aligned_cols=112 Identities=23% Similarity=0.198 Sum_probs=70.2
Q ss_pred CceeeEEEeEEeCC--CC------------CeeEEEEEEECC--Cce-EEEeecCCCCcceeeeeeccCCcccccCccHH
Q psy12655 1 MPISKIHARQIFDS--RG------------NPTVEVDLTTEL--GLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVT 63 (299)
Q Consensus 1 ~~I~~v~ar~ilDs--rG------------~pTvevev~~~~--g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~ 63 (299)
|+|++|..+.+-=. ++ ..++=|+|.|++ |.. -|-+.. . |.+..
T Consensus 5 mkI~~i~~~~v~~p~~~~~~~s~~~~~~~~~~~~~V~i~Td~~dG~~G~Ge~~~-----------~---------g~~~~ 64 (441)
T 4a35_A 5 GRISRLSVRDVRFPTSLGGHGADAMHTDPDYSAAYVVIETDAEDGIKGCGITFT-----------L---------GKGTE 64 (441)
T ss_dssp CBEEEEEEEEEECCGGGTTCCCCSSCSSCCCEEEEEEEEESSCSCCCEEEEEEE-----------C---------STTHH
T ss_pred CEEEEEEEEEEEecCCCCCCCccceeccCcceEEEEEEEECCCCCCEEEEeeeC-----------C---------CCChH
Confidence 68999998877422 11 136889999997 864 443322 1 11122
Q ss_pred HHHHHHHHhHHHHHhcCCCCccchHHHHHHH-HhhcCCCCcccCC------ChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 64 KAVGFINNDIAPALLKESFEVTQQKEIDEFM-IKLDGTENKSKFG------ANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 64 ~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L-~~lDgT~nks~lG------aNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
.....+ +.++|.|+ |.|+.+-..+-+.| ..+.........| ..|+.|+=+|+.=..++..|+|||+.|+
T Consensus 65 ~~~~~i-~~l~~~li--G~d~~~i~~~~~~~~~~l~~~~~~~~~g~~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLG 140 (441)
T 4a35_A 65 VVVCAV-NALAHHVL--NKDLKDIVGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLV 140 (441)
T ss_dssp HHHHHH-HHHGGGTT--TCBHHHHHTTHHHHHHHHHSCTTGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHH
T ss_pred HHHHHH-HHHHHHhC--CCCHHHHHHHHHHHHHHHhhccceeecCCCccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 223334 45899999 78888764332222 2232110000112 3689999999999999999999999999
No 108
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=98.31 E-value=2.1e-05 Score=77.43 Aligned_cols=99 Identities=16% Similarity=0.162 Sum_probs=69.7
Q ss_pred eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHh
Q psy12655 18 PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIK 96 (299)
Q Consensus 18 pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~ 96 (299)
++|=|+|.|++|.. -|.+.. + ..++..|.+.++|.|+ |.|+.+...|-+.|..
T Consensus 65 ~~vlV~V~tddGi~G~Ge~~~---------------------~---~~~~~~i~~~lap~Li--G~dp~~ie~i~~~m~~ 118 (455)
T 3fxg_A 65 GSFLVEIEATDGTVGFATGFG---------------------G---PPACWLVHQHFERFLI--GADPRNTNLLFEQMYR 118 (455)
T ss_dssp CEEEEEEEETTSCEEEEEEEC---------------------H---HHHHHHHHHTTHHHHT--TCCTTCHHHHHHHHHH
T ss_pred eEEEEEEEECCCCEEEEeCcC---------------------C---HHHHHHHHHHHHHHHC--CCCcchHHHHHHHHHH
Confidence 45889999999875 433221 1 1234557778999999 7899998888777754
Q ss_pred hcCCCCcccCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCcccccc
Q psy12655 97 LDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPV 147 (299)
Q Consensus 97 lDgT~nks~lG--aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~ 147 (299)
.. ....+-| ..|+.|+-+|+.=..++..|+|||+.|+ |.....+|+
T Consensus 119 ~~--~~~g~~G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~rd~vp~ 166 (455)
T 3fxg_A 119 AS--MFYGRKGLPIAVISVIDLALWDLLGKVRNEPVYRLIG---GATKERLDF 166 (455)
T ss_dssp HT--TTTCSSSHHHHHHHHHHHHHHHHHHHHHTCBGGGGTT---CCSCSEEEE
T ss_pred hh--hhccCCcchHHHHHHHHHHHHHHHHHHcCCCHHHHhC---CccCCeeEE
Confidence 31 1111223 2478999999999999999999999998 754344554
No 109
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=98.27 E-value=2.1e-05 Score=77.58 Aligned_cols=106 Identities=16% Similarity=0.217 Sum_probs=73.6
Q ss_pred CceeeEEEeEEeCCCC---------Ce---eEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIFDSRG---------NP---TVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG---------~p---Tvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+-|--++. .| .+=|+|.|++|.. -|-++. +..+..+
T Consensus 8 ~~It~i~~~~v~~~d~~~~~~~g~h~p~~~~~~V~i~td~Gi~G~GE~~~---------------------~~~v~~~-- 64 (470)
T 3p0w_A 8 PRVTEMQVIPVAGRDSMLLNLCGAHAPFFTRNLVILKDNAGRTGVGEVPG---------------------GEGIRQA-- 64 (470)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEEC---------------------CHHHHHH--
T ss_pred CeEEEEEEEEecCCCcccccccccCCCcceEEEEEEEECCCCEEEEeCCC---------------------hHHHHHH--
Confidence 5799998888854422 12 5688999999875 554431 1224333
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccC-------------------C--------ChhhHHHHHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKF-------------------G--------ANAILGVSLAVAK 120 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~l-------------------G--------aNailavSlA~ak 120 (299)
|++ ++|.|+ |.|+.+...+-+.|...-- +..+- | ..|+-|+-+|+.=
T Consensus 65 -i~~-l~p~Li--G~d~~~ie~i~~~~~~~~~--~~~~~G~~~~~~~~~r~~~p~~~~g~~~~~~~~~~A~sAID~ALWD 138 (470)
T 3p0w_A 65 -LER-VIPLVV--GQSIGRTNGVLSSIRRALA--GGGNAAHQATVHQVTSASEAAVLRQPHEINLRMDNVITAVEAALLD 138 (470)
T ss_dssp -HHH-TGGGTT--TCBGGGHHHHHHHHHHHHC---------------------------------CHHHHHHHHHHHHHH
T ss_pred -HHH-HHHHhC--CCChhhHHHHHHHHHHHHh--hcCCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHH
Confidence 444 899999 7899998888777755320 00111 1 1689999999999
Q ss_pred HHHHhcCCchHHHHH
Q psy12655 121 AGAAKKGVPLYKHLA 135 (299)
Q Consensus 121 AaA~~~~~pLy~yi~ 135 (299)
..++..|+|||+.|+
T Consensus 139 l~gK~~g~Pv~~LLG 153 (470)
T 3p0w_A 139 LLGQFLEVPVAELLG 153 (470)
T ss_dssp HHHHHHTSBGGGTST
T ss_pred HHHHHcCCcHHHHhC
Confidence 999999999999998
No 110
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=98.27 E-value=2.2e-05 Score=76.14 Aligned_cols=98 Identities=23% Similarity=0.199 Sum_probs=68.2
Q ss_pred eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHh
Q psy12655 18 PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIK 96 (299)
Q Consensus 18 pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~ 96 (299)
.+|=|+|.|++|.. -|.+.. | ..+...|++.++|.|+ |.|+.+...+-+.|..
T Consensus 59 ~~v~V~v~td~G~~G~Ge~~~---------------------g---~~~~~~i~~~l~p~Li--G~dp~~ie~i~~~m~~ 112 (404)
T 3ekg_A 59 GTLVVEIEASDGNVGFAVTTG---------------------G---EPAAYIVEKHLARFLE--GARVTDIERIWDQMYN 112 (404)
T ss_dssp CEEEEEEEETTSCEEEEEEEC---------------------H---HHHHHHHHHTTHHHHT--TSBTTCHHHHHHHHHH
T ss_pred cEEEEEEEECCCCEEEEeCCC---------------------c---HHHHHHHHHHHHHHHC--CCCcccHHHHHHHHHH
Confidence 45889999999875 443221 1 1234456778999999 7899998887777654
Q ss_pred hcCCCCcccCC--ChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 97 LDGTENKSKFG--ANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 97 lDgT~nks~lG--aNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
.- .+..+-| ..|+.|+-+|+.=..|+..|+|||+.|+ |.....+|
T Consensus 113 ~~--~~~g~~G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG---G~~r~~v~ 159 (404)
T 3ekg_A 113 ST--LYYGRKGLVINTISGVDLALWDLLGKVRREPVHQLLG---GAVRDELQ 159 (404)
T ss_dssp HH--GGGCSSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CCSSSEEE
T ss_pred Hh--hhcCCCcchHHHHHHHHHHHHHHHHHHhCCCHHHHcC---CCCCCeeE
Confidence 21 0011223 2489999999999999999999999999 75433444
No 111
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=98.23 E-value=8.5e-05 Score=72.85 Aligned_cols=107 Identities=16% Similarity=0.174 Sum_probs=73.5
Q ss_pred CceeeEEEeEEeCCCC-C-----------eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIFDSRG-N-----------PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG-~-----------pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
++|++|+.+-|--++. + ..+=|+|.|++|.. -|-++. +..+..+
T Consensus 5 ~~It~v~~~~v~~~d~~~~~~~g~~~~~~~~~iV~v~td~Gi~G~GE~~~---------------------~~~v~~~-- 61 (450)
T 3mzn_A 5 PKITKMNVVPVAGEDGFLLNLSGGHEPWFIRCVLVLEDESGNRGVGEIPS---------------------SEGILNG-- 61 (450)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEEC---------------------CHHHHHH--
T ss_pred CEEEEEEEEEecccCccccccccCCCCcceEEEEEEEECCCCEEEEeCCC---------------------cHHHHHH--
Confidence 5788888888754422 1 13478899999875 554431 1124333
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhh-cC--C-------CCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKL-DG--T-------ENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~l-Dg--T-------~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
|++ ++|.|+ |.|+.+-..|-+.|... -+ . .++ .+-..|+-|+-+|+.=..++..|+|||+.|+
T Consensus 62 -i~~-l~p~Li--G~dp~~ie~i~~~~~~~~~~~~~g~~G~~~~~~-~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG 134 (450)
T 3mzn_A 62 -LEK-CRSLVE--GARVNEVKQVLSRARGLLAQGGPEERGRQTFDL-RVAVHVITAIESALFDLFGQALGMPVADLLG 134 (450)
T ss_dssp -HHH-THHHHT--TCBGGGHHHHHHHHHHHHGGGCCCCCCSSSSCC-CSHHHHHHHHHHHHHHHHHHHHTCBGGGGST
T ss_pred -HHH-HHHHhC--CCChhhHHHHHHHHHHHhhcccCCCcccccccc-hhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 444 899999 78999988887777553 11 0 000 1224789999999999999999999999998
No 112
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=98.18 E-value=5.1e-05 Score=74.55 Aligned_cols=107 Identities=19% Similarity=0.197 Sum_probs=70.3
Q ss_pred CceeeEEEeEEeCCCC------------CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQIFDSRG------------NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~ilDsrG------------~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
++|++|+.+-|--+.. ...+=|+|.|++|.. -|-++. +..+..++
T Consensus 9 ~~It~v~v~~v~~~d~~~~~~~g~h~~~~~~~iV~v~td~Gi~G~GE~~~---------------------~~~v~~~i- 66 (455)
T 3pfr_A 9 PVITDMKVIPVAGHDSMLMNVGGAHSPYFTRNIVILTDNSGHTGVGEAPG---------------------GATIENAL- 66 (455)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEEC---------------------SHHHHHHH-
T ss_pred CEEEEEEEEEeccCCccccccccCCCCcceEEEEEEEECCCCEEEEeCCC---------------------cHHHHHHH-
Confidence 5788888888754311 123468889999875 444431 11244444
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHh--h-cCCCCcccCC-------ChhhHHHHHHHHHHHHHhcCCchHHHHH
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIK--L-DGTENKSKFG-------ANAILGVSLAVAKAGAAKKGVPLYKHLA 135 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~--l-DgT~nks~lG-------aNailavSlA~akAaA~~~~~pLy~yi~ 135 (299)
+ .++|.|+ |.|+.+-..+-+.|.. . -+.. ...-| ..|+-|+-+|+.=..++..|+|||+.|+
T Consensus 67 --~-~l~p~Li--G~dp~~ie~i~~~~~~~~~~~~~~-~g~~G~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLG 138 (455)
T 3pfr_A 67 --T-EAIPHVV--GRPISILNKIVNDMHNGYLDADYD-TFGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLG 138 (455)
T ss_dssp --H-HHGGGTT--TCBGGGHHHHHHHHHC----------------CHHHHHHHHHHHHHHHHHHHHHHHTSBGGGGST
T ss_pred --H-HHHHHhc--CCChhHHHHHHHHHHhhccccccC-CCCcccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhC
Confidence 3 3799999 7899888777776654 1 1000 00112 4689999999999999999999999998
No 113
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=98.08 E-value=7.1e-05 Score=73.62 Aligned_cols=101 Identities=15% Similarity=0.194 Sum_probs=67.5
Q ss_pred EEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCC
Q psy12655 22 VDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGT 100 (299)
Q Consensus 22 vev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT 100 (299)
|+|.|++|.. -|-+| +|..+..+++ .++|.|+ |.|+.+...|-+.|.+.-..
T Consensus 59 V~v~Td~Gi~G~GE~~---------------------g~~~~~~~le----~~~p~li--G~dp~~ie~i~~~l~~~~~~ 111 (464)
T 4g8t_A 59 VILKDNSGNTGVGEVP---------------------GGEKIRQTLE----DAKPLVI--GKTLGEYKNVMNTVRQTFND 111 (464)
T ss_dssp EEEEETTSCEEEEEEE---------------------CCHHHHHHHH----HHGGGTT--TCBGGGHHHHHHHHHHHTTT
T ss_pred EEEEECCCCEEEEeCC---------------------CcHHHHHHHH----HHHHHHc--CCCHHHHHHHHHHHHHHhhh
Confidence 7888888864 43332 3334555554 3789999 78999988887777654321
Q ss_pred CCcc---------cCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccccceEE
Q psy12655 101 ENKS---------KFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFN 151 (299)
Q Consensus 101 ~nks---------~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~n 151 (299)
.... ..-.+|+.|+-+|++=..++..|+|||+.||. |.....+|+-...
T Consensus 112 ~~~~g~g~~~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLGg--G~~Rd~V~~y~~~ 169 (464)
T 4g8t_A 112 HDAGGRGLQTFDLRTTIHVVTAIEAAMLDLLGQFLGVTVASLLGD--GQQRDAVEMLGYL 169 (464)
T ss_dssp SCTTTTCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTSBTGGGSTT--SCCCSEEEBCEEE
T ss_pred ccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCC--CCCCceEEEEEEe
Confidence 1111 12236899999999999999999999999972 2333455654433
No 114
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=97.63 E-value=0.00085 Score=63.06 Aligned_cols=96 Identities=23% Similarity=0.285 Sum_probs=64.1
Q ss_pred eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHHHHHhHHHHHhcCCC-CccchHHHHHHHH
Q psy12655 18 PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAPALLKESF-EVTQQKEIDEFMI 95 (299)
Q Consensus 18 pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~-~~~dQ~~ID~~L~ 95 (299)
++|=|+| |++|.. .|-+. .+ .|.|.++..+.+.+++.. |+ |. |+.+...+-+.|.
T Consensus 27 ~~~~V~v-td~G~~G~GE~~-----------~~------~~~ge~~~~~~~~l~~~~---l~--g~~d~~~~e~~~~~l~ 83 (338)
T 3ijl_A 27 PDVQVEI-EYEGVTGYGEAS-----------MP------PYLGETVESVMNFLKKVN---LE--QFSDPFQLEDILSYVD 83 (338)
T ss_dssp CEEEEEE-EETTEEEEEEEE-----------CC------GGGSCCHHHHHHHHTTCC---CT--TCCCTTCHHHHHHHHH
T ss_pred eEEEEEE-EeCCcEEEEeee-----------CC------CCCCCCHHHHHHHHHHHH---hc--CCCCccCHHHHHHHHH
Confidence 5677888 888864 33322 11 122334555555555432 66 67 8888887777776
Q ss_pred hhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhhCCCccccc
Q psy12655 96 KLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLAGNSNIILP 146 (299)
Q Consensus 96 ~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP 146 (299)
..- .....|+.|+-+|+.-..++..|+|||+.|+ |. ...+|
T Consensus 84 ~~~------~~~~~A~said~ALwDl~gk~~g~Pl~~LlG---g~-~~~v~ 124 (338)
T 3ijl_A 84 SLS------PKDTAAKAAVDIALHDLVGKLLGAPWYKIWG---LN-KEKTP 124 (338)
T ss_dssp HTC------SCCHHHHHHHHHHHHHHHHHHHTSBHHHHTT---CC-GGGCC
T ss_pred Hhc------cCCHHHHHHHHHHHHHHHHHHcCCcHHHHhC---CC-CCCcc
Confidence 532 2345789999999999999999999999998 65 33444
No 115
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=97.57 E-value=0.0021 Score=60.25 Aligned_cols=104 Identities=8% Similarity=0.056 Sum_probs=68.0
Q ss_pred CceeeEEEeEE--------eCCCCC----eeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHH
Q psy12655 1 MPISKIHARQI--------FDSRGN----PTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVG 67 (299)
Q Consensus 1 ~~I~~v~ar~i--------lDsrG~----pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~ 67 (299)
|+|++|..+.+ -.|+|. +.+=|+|.|++|.. .|-+ ..+.. .-|.|.++..+..
T Consensus 2 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~G~~G~GE~-----------~~~~~---~~~~~e~~~~~~~ 67 (342)
T 2okt_A 2 LKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAYFGEC-----------NAFQT---DWYDHETIASVKH 67 (342)
T ss_dssp BCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTCCEEEEEC-----------CCBSS---TTSCSCBHHHHHH
T ss_pred cEEEEEEEEEEeecccCCeecccEEEEeeeEEEEEEEECCCCEEEEEe-----------cCCCC---CcCCCCCHHHHHH
Confidence 78999988765 235552 45778889988864 4332 22211 0245556666777
Q ss_pred HHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCC
Q psy12655 68 FINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGV 128 (299)
Q Consensus 68 ~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~ 128 (299)
.+++.+ |.|+ |.++.+...+-+.|....| ...++.|+.+|+.-+.++..|+
T Consensus 68 ~l~~~~-~~l~--G~d~~~~~~l~~~l~~~~g-------~~~a~said~ALwDl~gk~~g~ 118 (342)
T 2okt_A 68 VIEQWF-EDNR--NKSFETYEAALKLVDSLEN-------TPAARATIVMALYQMFHVLPSF 118 (342)
T ss_dssp HHHHHH-HHHT--TCCBCSHHHHHHTTGGGTT-------CHHHHHHHHHHHHHTTCCCCCE
T ss_pred HHHHHH-HHHc--CCCcCCHHHHHHHHHHhhc-------ChHHHHHHHHHHHHHhhhhhCc
Confidence 777766 9998 7899888777666644311 2357888899888777766664
No 116
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=96.64 E-value=0.051 Score=50.42 Aligned_cols=69 Identities=16% Similarity=0.114 Sum_probs=44.5
Q ss_pred CccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchHHHHHhhh
Q psy12655 59 GKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLADLA 138 (299)
Q Consensus 59 Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~ 138 (299)
|.++......++....+.+. +++.. .....+ + ...|.-|+-+|+.-+.++..|+|+|+.++
T Consensus 55 get~e~~~~~l~~~~~~~~~--~~~~~---~~~~~~----~-------~~~a~aaid~AlwDl~gk~~g~pl~~llg--- 115 (329)
T 4gfi_A 55 GESIEGVTADIEAMADRVAA--GLTRQ---ELQQVM----K-------PGAARNAVDCALWDLEAKMSGKRAAEQVL--- 115 (329)
T ss_dssp TCCHHHHHHHHHTTHHHHHH--TCCHH---HHHHHS----C-------SSHHHHHHHHHHHHHHHHHHSCCHHHHHH---
T ss_pred CcCHHHHHHHHHHHhhhhcc--ccchh---hHHhhc----c-------cHHHHHHHHHHHHHHHhhhcCCChhHHhC---
Confidence 34556666666665555554 44332 122211 1 23578899999999999999999999998
Q ss_pred CCCccccc
Q psy12655 139 GNSNIILP 146 (299)
Q Consensus 139 g~~~~~lP 146 (299)
|.....+|
T Consensus 116 G~~~~~v~ 123 (329)
T 4gfi_A 116 GQPAQPLV 123 (329)
T ss_dssp SSCCCCEE
T ss_pred CCCCCcee
Confidence 65543343
No 117
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=96.39 E-value=0.033 Score=51.64 Aligned_cols=92 Identities=13% Similarity=0.020 Sum_probs=59.3
Q ss_pred ceeeEEEeEEe--------CCCC----CeeEEEEEEECCCce-EEEeecCCCCcceeeeeeccCCcccccCccHHHHHHH
Q psy12655 2 PISKIHARQIF--------DSRG----NPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGF 68 (299)
Q Consensus 2 ~I~~v~ar~il--------DsrG----~pTvevev~~~~g~~-ra~~psGaS~G~~Ea~elrd~~~~~~~Gkgv~~Av~~ 68 (299)
+|++|..+.+- .|+| +.++=|+|.|+ |.. .|-+.. + ..|.|..+..+...
T Consensus 2 ~I~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~i~td-G~~G~GE~~~-----------~-----~~~~~e~~~~~~~~ 64 (322)
T 1r6w_A 2 HMRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREG-EREGWGEISP-----------L-----PGFSQETWEEAQSV 64 (322)
T ss_dssp CCEEEEEEEEEEEBCTTCBC-CCBCCEEEEEEEEEEET-TEEEEEEECC-----------C-----TTTCSSCHHHHHHH
T ss_pred cceEEEEEEEEEeccCCeEeccEEEEeeeEEEEEEEEC-CeEEEEEecC-----------C-----CCCCccCHHHHHHH
Confidence 57777766552 3455 45677888885 754 333221 1 12555567777778
Q ss_pred HHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcCCchH
Q psy12655 69 INNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLY 131 (299)
Q Consensus 69 in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy 131 (299)
+++.+.|.|+| . . ++++ -..++.|+.+|++-..++..+.|+|
T Consensus 65 l~~~~~~~l~g--~--~----------~l~~-------~~~a~~aid~ALwDl~gk~~g~p~~ 106 (322)
T 1r6w_A 65 LLAWVNNWLAG--D--C----------ELPQ-------MPSVAFGVSCALAELTDTLPQAANY 106 (322)
T ss_dssp HHHHHHHHTTS--C--C----------CCCS-------SHHHHHHHHHHHHHHTTCSCCCSCC
T ss_pred HHHHHHHhhCC--h--h----------hccc-------ChHHHHHHHHHHHHhcCCCCCCCcc
Confidence 88888999984 3 1 1222 1368899999999998888888876
No 118
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=91.52 E-value=0.91 Score=41.91 Aligned_cols=27 Identities=15% Similarity=0.068 Sum_probs=24.5
Q ss_pred CCChhhHHHHHHHHHHHHHhcCCchHH
Q psy12655 106 FGANAILGVSLAVAKAGAAKKGVPLYK 132 (299)
Q Consensus 106 lGaNailavSlA~akAaA~~~~~pLy~ 132 (299)
....++.|+.+|+.-+.++..|+|+|+
T Consensus 68 ~~~~a~said~AlwDl~gk~~g~Pl~~ 94 (330)
T 3caw_A 68 MTTQIEQSIWLARRDALLRKEKKHVFD 94 (330)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCBTTT
T ss_pred chHHHHHHHHHHHHHHHHHHcCCcccc
Confidence 344789999999999999999999999
No 119
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=85.37 E-value=1.9 Score=39.85 Aligned_cols=55 Identities=9% Similarity=0.135 Sum_probs=38.6
Q ss_pred ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcC---CeeEeec
Q psy12655 219 DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEY---PIVSIED 295 (299)
Q Consensus 219 ~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~y---PIvsiED 295 (299)
+.++-++.+...-+..| +++.|.+|+ + ..+|.+|.++++..| ++| +|.+|||
T Consensus 143 ~~~~d~~~v~avr~~~g--~~~~L~vDa--------------------N--~~~~~~~A~~~~~~l-~~~~~~~i~~iEq 197 (332)
T 2ozt_A 143 SPEEEQAILKALLAALP--PGAKLRLDA--------------------N--GSWDRATANRWFAWL-DRHGNGKIEYVEQ 197 (332)
T ss_dssp CHHHHHHHHHHHHHHSC--TTCEEEEEC--------------------T--TCCCHHHHHHHHHHH-HHHCCTTEEEEEC
T ss_pred ChHHHHHHHHHHHHHcC--CCCEEEEcc--------------------c--CCCCHHHHHHHHHHH-HhhccCCcceeEC
Confidence 45666666654444445 457888885 1 235778988888765 788 9999999
Q ss_pred CCC
Q psy12655 296 PML 298 (299)
Q Consensus 296 p~~ 298 (299)
|+.
T Consensus 198 P~~ 200 (332)
T 2ozt_A 198 PLP 200 (332)
T ss_dssp CSC
T ss_pred CCC
Confidence 995
No 120
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=57.77 E-value=19 Score=33.04 Aligned_cols=26 Identities=12% Similarity=0.295 Sum_probs=19.9
Q ss_pred cCHHHHHHHHHHHHhcCCeeEeecCCC
Q psy12655 272 LPADKLTALYQEFIKEYPIVSIEDPML 298 (299)
Q Consensus 272 ~t~~elid~y~~l~~~yPIvsiEDp~~ 298 (299)
+|.+|-+.+... +++|.|.+||+|+.
T Consensus 135 w~~~~A~~~~~~-L~~~~l~~iEqP~~ 160 (327)
T 2opj_A 135 WDVDTAVRMIRL-LDRFELEYVEQPCA 160 (327)
T ss_dssp SCHHHHHHHHHH-HGGGCEEEEECCSS
T ss_pred CCHHHHHHHHHH-HHhcCCcEEeCCCC
Confidence 566777776555 56799999999985
No 121
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=38.94 E-value=45 Score=25.90 Aligned_cols=43 Identities=23% Similarity=0.426 Sum_probs=31.4
Q ss_pred CCChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCCccCHHHHHHHHHHHHhcCC
Q psy12655 217 ILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYP 289 (299)
Q Consensus 217 ~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~~~t~~elid~y~~l~~~yP 289 (299)
+.+.|+.|.-..+-|++.|++ + ....|++||-|-..+|+++|.
T Consensus 8 fstdeetlrkfkdiikkngfk---------------------v---------rtvrspqelkdsieelvkkyn 50 (134)
T 2l69_A 8 FSTDEETLRKFKDIIKKNGFK---------------------V---------RTVRSPQELKDSIEELVKKYN 50 (134)
T ss_dssp CCCCHHHHHHHHHHHHHTTCE---------------------E---------EEECSHHHHHHHHHHHTTCCC
T ss_pred EeCCHHHHHHHHHHHHhcCce---------------------E---------EEecCHHHHHHHHHHHHHHhC
Confidence 455688888888888887765 1 123567888888888888887
No 122
>3clq_A Uncharacterized protein; APC29596.3, conserved protein of unknown function, enterococ faecalis V583, structural genomics, PSI-2; 2.50A {Enterococcus faecalis}
Probab=37.94 E-value=55 Score=31.53 Aligned_cols=65 Identities=18% Similarity=0.227 Sum_probs=40.8
Q ss_pred ccCCcccccCccHHHHHHHHHHhHHHHHhcCCCCccchHHHHHHHHhhcCCCCcccCCChhhHHHHHHHHHHHHHhcC
Q psy12655 50 RDNDKAHYHGKGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKG 127 (299)
Q Consensus 50 rd~~~~~~~Gkgv~~Av~~in~~i~p~Li~~g~~~~dQ~~ID~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~ 127 (299)
.-|| .++.+..-...- +...|+|.|+..+.+..+++++.++|. +|+. --|-++||.||+......
T Consensus 185 ~MGD--E~H~Rn~AaT~l-l~~el~p~i~~~~~~~~~~~~v~~fl~---~nd~-------FFLnl~MAa~K~~~daA~ 249 (421)
T 3clq_A 185 HMGD--ECHNRNVAGSTL-LVQALTPYMVQTDFSREQLKEVFEFLG---SSDY-------FSGPTWMGAAKCALDAGH 249 (421)
T ss_dssp TTTC--CSSSCCHHHHHH-HHHHHHHHHHTSSSCHHHHHHHHHHHT---SCTT-------TTHHHHHHHHHHHHHHTC
T ss_pred hcch--hhhhhhHHHHHH-HHHHHhHHHhccCCChHHHHHHHHHHh---cCCc-------ccHHHHHHHHHHHHHHhc
Confidence 3455 467776655444 445589998854445555566666654 3332 457889999998766553
No 123
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=36.56 E-value=32 Score=25.56 Aligned_cols=40 Identities=28% Similarity=0.395 Sum_probs=24.0
Q ss_pred eEEeecCCcCCC-Ccc-------cceeEEEEecCCCCHHHHHHHHHHHH
Q psy12655 149 AFNVINGGSHAG-NKL-------AMQEFMILPTGASSFSEAMKIGSEVY 189 (299)
Q Consensus 149 ~~nvinGG~ha~-~~l-------~iQEfmiiP~ga~s~~eal~~~~ev~ 189 (299)
.|.++|-|.-.. ++. .+|+|. +|+-|.|+.||++++-.-|
T Consensus 20 ~ms~~n~g~l~~~~KKf~vtveg~~~s~E-VPV~A~sLdEAlE~AE~eY 67 (84)
T 2lmc_A 20 HMSNVNTGSLSVDNKKFWATVESSEHSFE-VPIYAETLDEALELAEWQY 67 (84)
T ss_dssp ------CCSCCCCSSEEEEEEECSSCEEE-EEECCSSHHHHHHHHHHTT
T ss_pred ccceeccccccccceEEEEEEecccceEE-EeeecccHHHHHHHHHHHh
Confidence 367777776552 321 357787 6999999999999875444
No 124
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=30.41 E-value=1.9e+02 Score=22.32 Aligned_cols=81 Identities=12% Similarity=0.193 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCC-ChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCC
Q psy12655 185 GSEVYHHLKKVINTKFGLDATAVGDEGGFAPNIL-DNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKN 263 (299)
Q Consensus 185 ~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~-~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~ 263 (299)
+.+++..+++++.+++|.....|.++--|.-++. +.=++.+|+++.=++-|.+ +..+ +.. |
T Consensus 12 ~~~I~~~V~~ilaE~lev~~e~Vtpda~l~dDLglDSLd~VeLVm~lE~~fGi~----ipd~--~e~----------~-- 73 (102)
T 2l9f_A 12 ATGALELVRHLVAERAELPVEVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLS----AVAM--PTN----------F-- 73 (102)
T ss_dssp SCCHHHHHHHHHHHHTTSCSSSCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCS----TTSS--CSC----------C--
T ss_pred HHHHHHHHHHHHHHHHCCCHHHcCCCcchhhhcCCcHHHHHHHHHHHHHHhCCC----CCcc--HHH----------H--
Confidence 4578889999999999977788999988886663 4468899999988887755 0000 000 0
Q ss_pred CCCCCCCccCHHHHHHHHHHHHhcCC
Q psy12655 264 PNSDKSQWLPADKLTALYQEFIKEYP 289 (299)
Q Consensus 264 ~~~~~~~~~t~~elid~y~~l~~~yP 289 (299)
+..|-.++++|..++.+.-|
T Consensus 74 ------~~~TV~d~vdyI~~~~~~~~ 93 (102)
T 2l9f_A 74 ------ATATVREMAEALEAREREAP 93 (102)
T ss_dssp ------TTCBHHHHHHHHHHHHHTCC
T ss_pred ------HHccHHHHHHHHHHhhcccc
Confidence 12678999999999988766
No 125
>1vk8_A Hypothetical protein TM0486; protein with possible role in cell WALL biogenesis, structur genomics, joint center for structural genomics; HET: UNL; 1.80A {Thermotoga maritima} SCOP: d.58.48.1
Probab=25.62 E-value=1.1e+02 Score=23.74 Aligned_cols=60 Identities=13% Similarity=0.177 Sum_probs=34.7
Q ss_pred ceeEEEEecCC-CCHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCcCCCCCChHHHHHHHHHHHHHcc
Q psy12655 165 MQEFMILPTGA-SSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAG 235 (299)
Q Consensus 165 iQEfmiiP~ga-~s~~eal~~~~ev~~~l~~~l~~k~G~~~t~vgdeGgfap~~~~~e~aL~ll~eAi~~ag 235 (299)
+=+|-++|.+. .|+.+.+..+ . ++|++ .|. ..-++.-|--.- .+.++.++++.++.+.+.
T Consensus 17 iv~~sv~Plg~~~svs~~Va~~---i----~vi~~-sGL-~y~~~pmgT~IE--Ge~devm~vvk~~~e~~~ 77 (106)
T 1vk8_A 17 TVSIKVVPAVEDGRLHEVIDRA---I----EKISS-WGM-KYEVGPSNTTVE--GEFEEIMDRVKELARYLE 77 (106)
T ss_dssp EEEEEEEESSCGGGHHHHHHHH---H----HHHHT-TCS-CEEECSSCEEEE--ECHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEeCCCCCchHHHHHHH---H----HHHHH-cCC-CeEeCCCccEEE--cCHHHHHHHHHHHHHHHH
Confidence 45678899985 4665554433 2 33332 353 334444222211 146899999999988876
No 126
>2bf9_A Pancreatic hormone; turkey, pancreas, polypeptide, atomic resolution, anisotropic refinement; HET: TYC; 0.99A {Meleagris gallopavo} SCOP: j.6.1.1 PDB: 1ppt_A 2k76_A 2h3s_B* 2h3t_B* 2h4b_C*
Probab=24.66 E-value=86 Score=19.84 Aligned_cols=19 Identities=16% Similarity=0.401 Sum_probs=15.5
Q ss_pred CCCccCHHHHHHHHHHHHh
Q psy12655 268 KSQWLPADKLTALYQEFIK 286 (299)
Q Consensus 268 ~~~~~t~~elid~y~~l~~ 286 (299)
+|..-+.+||..||..|.+
T Consensus 8 PG~dA~~Eela~Y~~~Lrh 26 (36)
T 2bf9_A 8 PGDDAPVEDLIRFYNDLQQ 26 (36)
T ss_dssp CCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHH
Confidence 4556799999999998854
No 127
>2bn5_A PSI; nuclear protein, splicing, protein-protein interaction, structure, proline-rich peptide; NMR {Drosophila melanogaster} PDB: 2bn6_A
Probab=21.83 E-value=49 Score=20.51 Aligned_cols=11 Identities=9% Similarity=0.359 Sum_probs=9.5
Q ss_pred HHHHHHHHHHH
Q psy12655 274 ADKLTALYQEF 284 (299)
Q Consensus 274 ~~elid~y~~l 284 (299)
+.|+++||+++
T Consensus 5 SaQW~eYYrsi 15 (33)
T 2bn5_A 5 SAQWAEYYRSV 15 (33)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 57999999986
No 128
>2dsy_A Hypothetical protein TTHA0281; structural genomics, thermus thermophilus HB8, NPPSFA; HET: NHE; 1.90A {Thermus thermophilus} SCOP: d.304.1.2
Probab=21.62 E-value=69 Score=23.59 Aligned_cols=28 Identities=25% Similarity=0.325 Sum_probs=21.8
Q ss_pred cCCCCCc---CCCC-------CChHHHHHHHHHHHHHc
Q psy12655 207 VGDEGGF---APNI-------LDNKEGLRLIVEAIEKA 234 (299)
Q Consensus 207 vgdeGgf---ap~~-------~~~e~aL~ll~eAi~~a 234 (299)
+-++||| .|.+ ++.+||++-+++|++..
T Consensus 23 i~edg~y~~~~Pdlpgc~t~G~T~eEA~~~a~eAl~~~ 60 (87)
T 2dsy_A 23 IADEEPYYGEIPDLPGVWATGKSLKECEANLQAALEDW 60 (87)
T ss_dssp CSSSSCEEEECTTSTTCEEEESSHHHHHHHHHHHHHHH
T ss_pred EecCCEEEEEECCCCCeeEeeCCHHHHHHHHHHHHHHH
Confidence 3566777 3766 58999999999999864
No 129
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV}
Probab=21.40 E-value=1.9e+02 Score=27.62 Aligned_cols=85 Identities=16% Similarity=0.236 Sum_probs=51.3
Q ss_pred HHHHhhhcCCCCcccCCCCCcCCCC--CChHHHHHHHHHHHHHcccccceEEEeeccccccccCCceeeecCCCCCCCCC
Q psy12655 193 KKVINTKFGLDATAVGDEGGFAPNI--LDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYDLDFKNPNSDKSQ 270 (299)
Q Consensus 193 ~~~l~~k~G~~~t~vgdeGgfap~~--~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~~~fk~~~~~~~~ 270 (299)
.++|+ +.|.....+..++.|.|-- ..+.++|+.+.+++++.+. |+.||.|--|..+.- ++ ..|.
T Consensus 195 ~~~l~-~lG~~v~~l~~~~~f~~~~~~p~~~e~l~~l~~~v~~~~a--Dlgia~DgDaDR~~v-----vd------~~G~ 260 (481)
T 4hjh_A 195 MYLLT-TLGVEPVALGRSDIFVPVDTEALRPEDIALLAQWGKSDRL--DAIVSTDGDADRPLI-----AD------EHGQ 260 (481)
T ss_dssp HHHHH-HTTCEEEEEEECSSCCCCCTTSCCHHHHHHHHHHHTSTTC--SEEEEECTTSSSEEE-----EC------TTSC
T ss_pred HHHHH-HcCCeEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHhcCC--CEEEEECCCCCceEE-----Ec------CCCC
Confidence 33443 3454333444455554321 1246789999999987663 799999987776531 11 2345
Q ss_pred ccCHHHHHHHHHHHHhcCCee
Q psy12655 271 WLPADKLTALYQEFIKEYPIV 291 (299)
Q Consensus 271 ~~t~~elid~y~~l~~~yPIv 291 (299)
.++.|++.-++.+++..-.|+
T Consensus 261 ~i~gd~l~~L~a~~l~~~~vv 281 (481)
T 4hjh_A 261 FVRGDLAGAITATWVGADTLV 281 (481)
T ss_dssp EECHHHHHHHHHHHTTCSEEE
T ss_pred EEChHHHHHHHHHHhhcCcEE
Confidence 677899888888777543333
No 130
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=20.50 E-value=2.2e+02 Score=26.63 Aligned_cols=126 Identities=19% Similarity=0.274 Sum_probs=65.8
Q ss_pred HHHHHHHHhcCCchHHHHHhhhCCCccccccceEEeecCCc----CCCCcccceeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy12655 117 AVAKAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGS----HAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHL 192 (299)
Q Consensus 117 A~akAaA~~~~~pLy~yi~~l~g~~~~~lP~P~~nvinGG~----ha~~~l~iQEfmiiP~ga~s~~eal~~~~ev~~~l 192 (299)
+.+++.|...++|.--|+- ....+.+|.- -.++..|. .+ ...-|..+||= -...+|+|.|+...++-...
T Consensus 91 ~~v~~~A~~~~VPVaLHlD---Hg~~~~~~~i-~~~i~a~~~~~~~~-~~~gFtSVMiD-gS~~p~eENI~~Tkevv~~a 164 (358)
T 1dos_A 91 HHVHQMAEHYGVPVILHTD---HCAKKLLPWI-DGLLDAGEKHFAAT-GKPLFSSHMID-LSEESLQENIEICSKYLERM 164 (358)
T ss_dssp HHHHHHHHHHTCEEEEEEC---CCCGGGHHHH-HHHHHHHHHHHHHH-SSCSCSEEEEC-CTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECC---CCCCccHHHH-HHHHHHHHHHHHhc-ccCCCceEeec-CCCCCHHHHHHHHHHHHHHH
Confidence 4556667767778777764 2222222211 11111110 00 11238889983 44679999999988877665
Q ss_pred HHH---HhhhcCCCCcccCCCCCcC-------CCCCChHHHHHHHHHHHHHcccccceEEEeeccccccccCCcee
Q psy12655 193 KKV---INTKFGLDATAVGDEGGFA-------PNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFFKEGQYD 258 (299)
Q Consensus 193 ~~~---l~~k~G~~~t~vgdeGgfa-------p~~~~~e~aL~ll~eAi~~ag~~~~i~ialD~AAse~~~~g~Y~ 258 (299)
++. ++-..|.. . |.|.|-. --+.++|||.+++.+- .|......||+-+..++ |.|.
T Consensus 165 h~~gvsVEaELG~v-G--G~EDgv~~~~~~~~~~yT~Peea~~fv~~t---tgvd~~d~LAvaiGt~H----G~Yk 230 (358)
T 1dos_A 165 SKIGMTLEIELGCT-G--GEEDGVDNSHMDASALYTQPEDVDYAYTEL---SKISPRFTIAASFGNVH----GVYK 230 (358)
T ss_dssp HHTTCEEEEECCCC-C--CCCCCCSCCCCCCCCCSCCHHHHHHHHHHH---HTTCSCEEEECCSSCCC----SSCC
T ss_pred HHcCCEEEEEeccc-c--CcCCCccccccccccccCCHHHHHHHHHHh---cCCChhceEEEeccccc----CccC
Confidence 543 33344532 1 2232211 1358999999998751 12111235666655544 6663
Done!