RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy12655
(299 letters)
>gnl|CDD|215095 PLN00191, PLN00191, enolase.
Length = 457
Score = 516 bits (1330), Expect = 0.0
Identities = 215/295 (72%), Positives = 242/295 (82%), Gaps = 4/295 (1%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGV 62
I+K+ ARQI DSRGNPTVEVDL T G+FRAAVPSGASTGIYEALELRD DK Y GKGV
Sbjct: 28 ITKVKARQIIDSRGNPTVEVDLHTSKGMFRAAVPSGASTGIYEALELRDGDKD-YLGKGV 86
Query: 63 TKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAG 122
KAV +N IAPAL+ + T Q +ID FM++LDGT NK K GANAIL VSLAV KAG
Sbjct: 87 LKAVKNVNEIIAPALI--GMDPTDQTQIDNFMLELDGTPNKGKLGANAILAVSLAVCKAG 144
Query: 123 AAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAM 182
AA+KGVPLYKH+ADLAGN ++LPVPAFNVINGGSHAGNKLAMQEFMILP GASSF EAM
Sbjct: 145 AAEKGVPLYKHIADLAGNKKLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAM 204
Query: 183 KIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEI 242
++GSEVYHHLK VI K+G DA VGDEGGFAPNI DNKEGL L+ EAIEKAGYTGK++I
Sbjct: 205 QMGSEVYHHLKAVIKKKYGQDACNVGDEGGFAPNIQDNKEGLELLKEAIEKAGYTGKIKI 264
Query: 243 GMDVAASEFF-KEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
GMDVAASEF+ K+ +YDLDFK N+D S D+L LY+EF+ +YPIVSIEDP
Sbjct: 265 GMDVAASEFYTKDKKYDLDFKEENNDGSNKKSGDELIDLYKEFVSDYPIVSIEDP 319
>gnl|CDD|239429 cd03313, enolase, Enolase: Enolases are homodimeric enzymes that
catalyse the reversible dehydration of
2-phospho-D-glycerate to phosphoenolpyruvate as part of
the glycolytic and gluconeogenesis pathways. The
reaction is facilitated by the presence of metal ions.
Length = 408
Score = 503 bits (1297), Expect = e-180
Identities = 186/296 (62%), Positives = 226/296 (76%), Gaps = 13/296 (4%)
Query: 5 KIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKGVT 63
KI AR+I DSRGNPTVEV++TTE G + RAAVPSGASTG +EA+ELRD DK+ Y GKGV
Sbjct: 1 KIKAREILDSRGNPTVEVEVTTEDGGVGRAAVPSGASTGEHEAVELRDGDKSRYLGKGVL 60
Query: 64 KAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGA 123
KAV +N IAPAL+ +VT Q+ ID+ +I+LDGT NKSK GANAILGVSLAVAKA A
Sbjct: 61 KAVKNVNEIIAPALIG--MDVTDQRAIDKLLIELDGTPNKSKLGANAILGVSLAVAKAAA 118
Query: 124 AKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMK 183
A G+PLY++L LA +LPVP FNVINGG+HAGNKL QEFMI+P GA SFSEA++
Sbjct: 119 AALGLPLYRYLGGLA---AYVLPVPMFNVINGGAHAGNKLDFQEFMIVPVGAPSFSEALR 175
Query: 184 IGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTG--KVE 241
+G+EVYH LKKV+ K GL AT VGDEGGFAPN+ N+E L L+VEAIEKAGY K+
Sbjct: 176 MGAEVYHTLKKVLKKKGGLLATNVGDEGGFAPNLSSNEEALDLLVEAIEKAGYEPGKKIA 235
Query: 242 IGMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
I +DVAASEF+ EG+Y D SD+ + L +++L Y+E +K+YPIVSIEDP
Sbjct: 236 IALDVAASEFYDEGKYVYD-----SDEGKKLTSEELIDYYKELVKKYPIVSIEDPF 286
>gnl|CDD|240259 PTZ00081, PTZ00081, enolase; Provisional.
Length = 439
Score = 498 bits (1285), Expect = e-178
Identities = 204/306 (66%), Positives = 238/306 (77%), Gaps = 12/306 (3%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGK 60
I I AR+I DSRGNPTVEVDLTTE G+FRAAVPSGASTGIYEALELRD DK+ Y GK
Sbjct: 2 STIKSIKAREILDSRGNPTVEVDLTTEKGVFRAAVPSGASTGIYEALELRDGDKSRYLGK 61
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIK-LDGTEN-----KSKFGANAILGV 114
GV KAV +N IAPAL+ +VT QK++D+ M++ LDGT+N KSK GANAIL V
Sbjct: 62 GVLKAVENVNEIIAPALI--GKDVTDQKKLDKLMVEQLDGTKNEWGWCKSKLGANAILAV 119
Query: 115 SLAVAKAGAAKKGVPLYKHLADLAGN--SNIILPVPAFNVINGGSHAGNKLAMQEFMILP 172
S+AVA+A AA KGVPLYK+LA LAG +LPVP FNVINGG HAGNKLA QEFMI P
Sbjct: 120 SMAVARAAAAAKGVPLYKYLAQLAGKPTDKFVLPVPCFNVINGGKHAGNKLAFQEFMIAP 179
Query: 173 TGASSFSEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIE 232
GA SF EA+++G+EVYH LK VI K+GLDAT VGDEGGFAPNI D +E L L+VEAI+
Sbjct: 180 VGAPSFKEALRMGAEVYHSLKSVIKKKYGLDATNVGDEGGFAPNIKDPEEALDLLVEAIK 239
Query: 233 KAGYTGKVEIGMDVAASEFF--KEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPI 290
KAGY GKV+I MDVAASEF+ ++ YDLDFKNPN+DKS L ++L LY + +K+YPI
Sbjct: 240 KAGYEGKVKICMDVAASEFYDKEKKVYDLDFKNPNNDKSNKLTGEELVELYLDLVKKYPI 299
Query: 291 VSIEDP 296
VSIEDP
Sbjct: 300 VSIEDP 305
>gnl|CDD|234617 PRK00077, eno, enolase; Provisional.
Length = 425
Score = 440 bits (1135), Expect = e-155
Identities = 168/300 (56%), Positives = 214/300 (71%), Gaps = 18/300 (6%)
Query: 1 MPISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHG 59
I I AR+I DSRGNPTVEV++T E G F RAAVPSGASTG EA+ELRD DK+ Y G
Sbjct: 2 SKIEDIIAREILDSRGNPTVEVEVTLEDGAFGRAAVPSGASTGEREAVELRDGDKSRYLG 61
Query: 60 KGVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVA 119
KGV KAV +N +IAPAL+ + Q+ ID+ MI+LDGT NKSK GANAILGVSLAVA
Sbjct: 62 KGVLKAVENVNEEIAPALI--GLDALDQRAIDKAMIELDGTPNKSKLGANAILGVSLAVA 119
Query: 120 KAGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFS 179
KA A G+PLY++L G + +LPVP N+INGG+HA N + +QEFMI+P GA SF
Sbjct: 120 KAAADSLGLPLYRYLG---GPNAKVLPVPMMNIINGGAHADNNVDIQEFMIMPVGAPSFK 176
Query: 180 EAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGK 239
EA+++G+EV+H LKKV+ K GL +TAVGDEGGFAPN+ N+E L LI+EAIEKAGY
Sbjct: 177 EALRMGAEVFHTLKKVLKEK-GL-STAVGDEGGFAPNLKSNEEALDLILEAIEKAGYKPG 234
Query: 240 VEI--GMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
+I +D AASEF+K+G+Y L+ + L ++++ E + +YPIVSIED +
Sbjct: 235 EDIALALDCAASEFYKDGKYVLEGEG--------LTSEEMIDYLAELVDKYPIVSIEDGL 286
>gnl|CDD|223226 COG0148, Eno, Enolase [Carbohydrate transport and metabolism].
Length = 423
Score = 387 bits (996), Expect = e-134
Identities = 169/299 (56%), Positives = 214/299 (71%), Gaps = 19/299 (6%)
Query: 2 PISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGK 60
I + AR+I DSRGNPTVEV++T E G RAAVPSGASTG +EA+ELRD D Y GK
Sbjct: 3 AIEDVIAREILDSRGNPTVEVEVTLEDGFGGRAAVPSGASTGEHEAVELRDGDSR-YLGK 61
Query: 61 GVTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAK 120
GV KAV +N IAPAL+ + T Q ID +I+LDGTENKSK GANAILGVSLAVAK
Sbjct: 62 GVLKAVANVNEIIAPALIG--LDATDQALIDSLLIELDGTENKSKLGANAILGVSLAVAK 119
Query: 121 AGAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSE 180
A AA G+PLY++L G + ++LPVP NVINGG+HA N L +QEFMI+P GA SF E
Sbjct: 120 AAAASLGIPLYRYLG---GLNALVLPVPMMNVINGGAHADNNLDIQEFMIMPVGAESFKE 176
Query: 181 AMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKV 240
A++ G+EV+HHLKK++ K +T VGDEGGFAPN+ N+E L ++VEAIE+AGY
Sbjct: 177 ALRAGAEVFHHLKKLLKEKG--LSTGVGDEGGFAPNLKSNEEALDILVEAIEEAGYEPGE 234
Query: 241 EI--GMDVAASEFFKEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
+I +DVAASEF+K+G+Y L+ + L +++L Y E +K+YPIVSIEDP+
Sbjct: 235 DIALALDVAASEFYKDGKYVLEGE--------SLTSEELIEYYLELVKKYPIVSIEDPL 285
>gnl|CDD|213580 TIGR01060, eno, phosphopyruvate hydratase. Alternate name: enolase
[Energy metabolism, Glycolysis/gluconeogenesis].
Length = 425
Score = 366 bits (942), Expect = e-126
Identities = 164/300 (54%), Positives = 210/300 (70%), Gaps = 18/300 (6%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELGLF-RAAVPSGASTGIYEALELRDNDKAHYHGKG 61
I I AR+I DSRGNPTVEV++ E G F RAAVPSGASTG EALELRD DK Y GKG
Sbjct: 1 IVDIRAREILDSRGNPTVEVEVILEDGTFGRAAVPSGASTGEREALELRDGDKKRYLGKG 60
Query: 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKA 121
V KAV +N IAP L + T Q+EID+ +I+LDGT NKSK GANAILGVS+AVAKA
Sbjct: 61 VLKAVENVNEIIAPEL--IGMDATDQREIDQILIELDGTPNKSKLGANAILGVSMAVAKA 118
Query: 122 GAAKKGVPLYKHLADLAGNSNIILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEA 181
A G+PLY++L G + +LPVP N+INGG+HA N L QEFMI+P GA SF EA
Sbjct: 119 AADSLGLPLYRYLG---GFNAYVLPVPMMNIINGGAHADNNLDFQEFMIMPVGAPSFREA 175
Query: 182 MKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVE 241
+++G+EV+H LKK++ K GL AT VGDEGGFAPN+ N+E L +IVEAIEKAGY +
Sbjct: 176 LRMGAEVFHALKKLLKEK-GL-ATGVGDEGGFAPNLASNEEALEIIVEAIEKAGYKPGED 233
Query: 242 I--GMDVAASEFF--KEGQYDLDFKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDPM 297
+ +D AASEF+ ++G+Y +N ++++ Y+E +++YPI+SIED +
Sbjct: 234 VALALDCAASEFYDEEDGKYVYKGENKQLT------SEEMIEYYEELVEKYPIISIEDGL 287
>gnl|CDD|109180 pfam00113, Enolase_C, Enolase, C-terminal TIM barrel domain.
Length = 296
Score = 288 bits (739), Expect = 2e-97
Identities = 119/156 (76%), Positives = 135/156 (86%), Gaps = 2/156 (1%)
Query: 143 IILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGL 202
+LPVP NVINGGSHAGNKLAMQEFMILPTGASSF+EAM++GSEVYH+LK VI K+G
Sbjct: 2 YVLPVPMMNVINGGSHAGNKLAMQEFMILPTGASSFTEAMRMGSEVYHNLKSVIKAKYGQ 61
Query: 203 DATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEIGMDVAASEFF--KEGQYDLD 260
DAT VGDEGGFAPNI NKE L LIVEAIEKAGYTGKV+I MDVA+SEF+ K+G+YDLD
Sbjct: 62 DATNVGDEGGFAPNIQSNKEALDLIVEAIEKAGYTGKVKIAMDVASSEFYNKKDGKYDLD 121
Query: 261 FKNPNSDKSQWLPADKLTALYQEFIKEYPIVSIEDP 296
FKNP SD S+WL +D+L LY+E IK+YPIVSIEDP
Sbjct: 122 FKNPKSDPSKWLTSDQLADLYKELIKKYPIVSIEDP 157
>gnl|CDD|202827 pfam03952, Enolase_N, Enolase, N-terminal domain.
Length = 132
Score = 233 bits (597), Expect = 3e-78
Identities = 86/133 (64%), Positives = 103/133 (77%), Gaps = 3/133 (2%)
Query: 3 ISKIHARQIFDSRGNPTVEVDLTTELG-LFRAAVPSGASTGIYEALELRDNDKAHYHGKG 61
I+KIHAR+I DSRGNPTVEV++T E G RAAVPSGASTG +EA+ELRD DK+ Y GKG
Sbjct: 2 ITKIHAREILDSRGNPTVEVEVTLEDGTFGRAAVPSGASTGSHEAVELRDGDKSRYGGKG 61
Query: 62 VTKAVGFINNDIAPALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKA 121
V KAV +N IAPAL+ + Q+ ID+ +I+LDGT NKSK GANAIL VSLAVAKA
Sbjct: 62 VLKAVENVNEIIAPALIG--MDARDQRAIDKTLIELDGTPNKSKLGANAILAVSLAVAKA 119
Query: 122 GAAKKGVPLYKHL 134
AA G+PLY++L
Sbjct: 120 AAAALGLPLYRYL 132
>gnl|CDD|169397 PRK08350, PRK08350, hypothetical protein; Provisional.
Length = 341
Score = 71.8 bits (176), Expect = 3e-14
Identities = 49/133 (36%), Positives = 72/133 (54%), Gaps = 19/133 (14%)
Query: 16 GNPTVEVDLTTELGLFRAAVPSGASTGIYEALELRDNDKAHYHGKGVTKAVGFINNDIAP 75
G +VEVD+ T+ G R A P + +Y A +AH +AV ++ I P
Sbjct: 17 GKYSVEVDVITDSGFGRFAAPIDENPSLYIA-------EAH-------RAVSEVDEIIGP 62
Query: 76 ALLKESFEVTQQKEIDEFMIKLDGTENKSKFGANAILGVSLAVAKAGAAKKGVPLYKHLA 135
L+ F+ ++Q+ ID ++ ++DGTE+ S GAN L VS+AVAKA A K +PLY +
Sbjct: 63 ELI--GFDASEQELIDSYLWEIDGTEDFSHIGANTALAVSVAVAKAAANSKNMPLYSY-- 118
Query: 136 DLAGNSNIILPVP 148
+ G LPVP
Sbjct: 119 -IGGTFTTELPVP 130
>gnl|CDD|179825 PRK04326, PRK04326, methionine synthase; Provisional.
Length = 330
Score = 31.1 bits (71), Expect = 0.64
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 20/104 (19%)
Query: 177 SFSEAMKIGSEVYHHLKKVINTKFGLDATAVG------DEGGFAPNILDNKEGLRLIVEA 230
SF+E K E+ L KVIN + + G DE P + + E + + VEA
Sbjct: 144 SFNEYYKDKEELVFDLAKVINEEI-KNLVEAGAKYIQIDE----PALATHPEDVEIAVEA 198
Query: 231 IEKAGYTGKVEIGMDVAASEF---------FKEGQYDLDFKNPN 265
+ + ++G+ V ++ F Q+DL+F N N
Sbjct: 199 LNRIVKGINAKLGLHVCYGDYSRIAPYILEFPVDQFDLEFANGN 242
>gnl|CDD|220483 pfam09940, DUF2172, Domain of unknown function (DUF2172). This
domain, found in various hypothetical prokaryotic
proteins, has no known function. An aminopeptidase
domain is conserved within the family, but its relevance
has not been established yet.
Length = 384
Score = 31.1 bits (71), Expect = 0.74
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 184 IGSEVY--HHLKKVINTKFGLDATAVGDEGGF 213
IGS Y + + + K GL T +GD+GG+
Sbjct: 179 IGSIAYLSRNEEHLKRVKAGLVLTCLGDDGGY 210
>gnl|CDD|193522 cd05644, M28_like_3, M28 Zn-Peptidases. Peptidase family M28 (also
called aminopeptidase Y family), uncharacterized
subfamily. The M28 family contains aminopeptidases as
well as carboxypeptidases. They typically have
co-catalytic zinc ions; each zinc ion is tetrahedrally
co-ordinated, with three amino acid ligands plus
activated water; one aspartate residue binds both metal
ions. Proteins in this subfamily conserve some of the
metal-coordinating residues of the typically
co-catalytic M28 family, and appear to bind a single
metal (Zn) ion.
Length = 415
Score = 28.7 bits (65), Expect = 4.5
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 7/35 (20%)
Query: 184 IGSEVY-----HHLKKVINTKFGLDATAVGDEGGF 213
IGS Y HLKK K G + VGDEG +
Sbjct: 211 IGSITYLSRNLEHLKK--RVKAGFVLSCVGDEGAY 243
>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional.
Length = 409
Score = 28.5 bits (64), Expect = 5.0
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 14/99 (14%)
Query: 145 LPVPAFNVING-GSHAGNKLAMQEFMILPTGASSFSEAMKIGSEVYHHLKKVINTKFGLD 203
LP FN++ G G G +LA S + ++ G ++ K I TK L+
Sbjct: 126 LPKGVFNLVLGRGETVGQELAGNP----KVAMVSMTGSVSAGEKIMAAAAKNI-TKVCLE 180
Query: 204 ATAVGDEGGFAPNILDNKEGLRLIVEAI--EKAGYTGKV 240
GG AP I+ + L L V+AI + +G+V
Sbjct: 181 L------GGKAPAIVMDDADLDLAVKAIVDSRVINSGQV 213
>gnl|CDD|236470 PRK09333, PRK09333, 30S ribosomal protein S19e; Provisional.
Length = 150
Score = 27.5 bits (62), Expect = 5.6
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 14/51 (27%)
Query: 224 LRLIVEAIEKAGYTGKVEIG----------MDVAASEFFKEGQYDLDFKNP 264
+R I++ +EKAG K + G +D A+E KE L + P
Sbjct: 98 IRKILQQLEKAGLVEKTKKGRVITPKGRSLLDNLAAEVKKE----LAEERP 144
>gnl|CDD|146279 pfam03557, Bunya_G1, Bunyavirus glycoprotein G1. Bunyavirus has
three genomic segments: small (S), middle-sized (M), and
large (L). The S segment encodes the nucleocapsid and a
non-structural protein. The M segment codes for two
glycoproteins, G1 and G2, and another non-structural
protein (NSm). The L segment codes for an RNA
polymerase. This family contains the G1 glycoprotein
which is the viral attachment protein.
Length = 871
Score = 28.5 bits (64), Expect = 5.7
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 23 DLTTELGLFRAAVPSGASTGIYEALELRDNDKA-HYHGKGVTKAVGFINNDIAPALLK 79
DL L A +S+ I + L +DND+ K TK F N + A+L
Sbjct: 129 DLNLALTTLHHAFRGTSSSYIAKLLSEKDNDQLVKLLSKIKTK---FPGNALLKAILD 183
>gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent
alpha-ketoglutaric semialdehyde dehydrogenases and plant
delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH
family 12-like. ALDH subfamily which includes the
NAD(P)+-dependent, alpha-ketoglutaric semialdehyde
dehydrogenases (KGSADH, EC 1.2.1.26); plant
delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH,
EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of
the MaoC (monoamine oxidase C) dehydratase regulatory
protein; and orthologs of MaoC, PaaZ and PaaN, which are
putative ring-opening enzymes of the aerobic
phenylacetic acid catabolic pathway.
Length = 442
Score = 28.0 bits (62), Expect = 6.4
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 144 ILPVPAFNVINGGSHAGNKLAMQ-EF-MILPTGASSFSEAM 182
+LP +ING L + M+L TG+S +E +
Sbjct: 155 LLPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKL 195
>gnl|CDD|226984 COG4637, COG4637, Predicted ATPase [General function prediction
only].
Length = 373
Score = 27.8 bits (62), Expect = 7.6
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 23/109 (21%)
Query: 143 IILPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFSEAMK-IGSEVYHHLKKVINTKFG 201
+ L + NVI G + AG S+F +A++ + V +L++ + + G
Sbjct: 17 LDLEIRRVNVIIGANGAGK--------------SNFYDALRLLADAVRGNLQQALQREGG 62
Query: 202 LDAT--------AVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTGKVEI 242
L+ E FA N + + L I E GY K EI
Sbjct: 63 LNEVLTRGKEQEDEEIELKFAMNTFELEILLTFIPNGQEGFGYEPKREI 111
>gnl|CDD|149916 pfam09002, DUF1887, Domain of unknown function (DUF1887). This
domain is found in a set of hypothetical bacterial
proteins.
Length = 379
Score = 27.5 bits (61), Expect = 9.1
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 12/99 (12%)
Query: 179 SEAMKIGSEVYHHLKKVINTKFGLDATAVGDEGGFAPNILDNKEGLRLIVEAIEKAGYTG 238
+E + E + L K + + G+D G +I +E L + E KAG
Sbjct: 35 TEGQR---EQANRLLKALKIR-GIDVDFFEIPDGV--DIEAIEEALLGLAEEY-KAGEEV 87
Query: 239 KVEIG-----MDVAASEFFKEGQYDLDFKNPNSDKSQWL 272
K+ M ++A E F+ + + + P SD+ WL
Sbjct: 88 KLNATGGLKHMLLSAYEVFRSYHWPIFYVEPASDELCWL 126
>gnl|CDD|222817 PHA00965, PHA00965, tail protein.
Length = 588
Score = 27.6 bits (61), Expect = 9.3
Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 8/91 (8%)
Query: 151 NVINGGSHAGNKL---AMQEFMILPTG-ASSFSEAMKIGSEVYHHLKKVINTKFGLDATA 206
V+N GS ++ + PT F+E Y + +
Sbjct: 421 TVLNNGSDPKSRFYNAVSVASNLSPTALFGKFNEE----YNFYKQQQAEYKDLALQPPSV 476
Query: 207 VGDEGGFAPNILDNKEGLRLIVEAIEKAGYT 237
E G A I ++ GL L + + T
Sbjct: 477 TESEMGNAFQIKNSIFGLTLKISVPSQKEIT 507
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.315 0.135 0.380
Gapped
Lambda K H
0.267 0.0751 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 15,527,967
Number of extensions: 1524591
Number of successful extensions: 1156
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1119
Number of HSP's successfully gapped: 33
Length of query: 299
Length of database: 10,937,602
Length adjustment: 96
Effective length of query: 203
Effective length of database: 6,679,618
Effective search space: 1355962454
Effective search space used: 1355962454
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (26.5 bits)