Your job contains 1 sequence.
>psy12657
MIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNL
GIEIAYDLYDPTIHNITVLRLEKRLDDDLLYLRDALPNVVDNLGIEIAYDMYDPTIHNIT
VLRLEKRLDDDLLYLRDALPQYSTFPFDMEPEYLLDGAPVPINDIKVKLKPRPWVGRWER
KGYKGIDDVDQHITEKMKGQKKKLEEPWEKYDLMKEYRRTIPEEEQEEIFSEVFSELHQL
SLSNKKLKKSRVYVKPKKTG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12657
(260 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037608 - symbol:mRpL19 "mitochondrial ribosomal p... 348 9.8e-32 1
WB|WBGene00022470 - symbol:mrpl-19 species:6239 "Caenorha... 245 8.0e-21 1
ZFIN|ZDB-GENE-040801-55 - symbol:mrpl19 "mitochondrial ri... 245 8.0e-21 1
UNIPROTKB|F1NEW6 - symbol:MRPL19 "Uncharacterized protein... 237 5.7e-20 1
RGD|1587381 - symbol:Mrpl19 "mitochondrial ribosomal prot... 234 1.2e-19 1
UNIPROTKB|P49406 - symbol:MRPL19 "39S ribosomal protein L... 230 3.1e-19 1
UNIPROTKB|F1MMM8 - symbol:MRPL19 "39S ribosomal protein L... 224 1.4e-18 1
UNIPROTKB|Q2HJI0 - symbol:MRPL19 "39S ribosomal protein L... 224 1.4e-18 1
UNIPROTKB|I3LNJ0 - symbol:MRPL19 "Uncharacterized protein... 219 4.6e-18 1
MGI|MGI:1926274 - symbol:Mrpl19 "mitochondrial ribosomal ... 217 7.5e-18 1
UNIPROTKB|E2R077 - symbol:MRPL19 "Uncharacterized protein... 214 1.6e-17 1
UNIPROTKB|H7C2J0 - symbol:MRPL19 "39S ribosomal protein L... 152 5.8e-11 1
TIGR_CMR|GSU_0648 - symbol:GSU_0648 "ribosomal protein L1... 115 6.2e-07 1
TIGR_CMR|CJE_0814 - symbol:CJE_0814 "ribosomal protein L1... 107 5.4e-06 1
TIGR_CMR|CBU_0442 - symbol:CBU_0442 "ribosomal protein L1... 97 7.8e-05 1
TIGR_CMR|SO_1360 - symbol:SO_1360 "ribosomal protein L19"... 97 7.8e-05 1
TIGR_CMR|ECH_0004 - symbol:ECH_0004 "ribosomal protein L1... 92 0.00029 1
TIGR_CMR|NSE_0895 - symbol:NSE_0895 "ribosomal protein L1... 89 0.00064 1
>FB|FBgn0037608 [details] [associations]
symbol:mRpL19 "mitochondrial ribosomal protein L19"
species:7227 "Drosophila melanogaster" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] InterPro:IPR001857 Pfam:PF01245 PROSITE:PS01015
EMBL:AE014297 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680 CTD:9801
eggNOG:NOG247570 GeneTree:ENSGT00390000009415 OMA:DLYNPTI
EMBL:AY061413 RefSeq:NP_524284.1 UniGene:Dm.2462
ProteinModelPortal:Q9VHN6 SMR:Q9VHN6 DIP:DIP-23691N
MINT:MINT-996971 STRING:Q9VHN6 PaxDb:Q9VHN6 PRIDE:Q9VHN6
EnsemblMetazoa:FBtr0081901 GeneID:41028 KEGG:dme:Dmel_CG8039
FlyBase:FBgn0037608 InParanoid:Q9VHN6 OrthoDB:EOG4XKSQ1
PhylomeDB:Q9VHN6 GenomeRNAi:41028 NextBio:821796 Bgee:Q9VHN6
GermOnline:CG8039 Uniprot:Q9VHN6
Length = 306
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 63/161 (39%), Positives = 94/161 (58%)
Query: 98 NVVDNLGIEIAYDMYDPTIHNITVXXXXXXXXXXXXXXXXXXPQYSTFPFDMEPEYLLDG 157
NV+D+ G+E+ Y++YDPTI I V P+YSTF +ME E L +G
Sbjct: 144 NVIDHQGMEVVYELYDPTILKIEVLRLEKRLDDSLFYLRDALPEYSTFDENMEAEPLEEG 203
Query: 158 APVPINDIKVKLKPRPWVGRWERKGYKGIDDVDQHITEKMKGQKKKLEEPWEKYDLMKEY 217
APVP+NDIKV L+PRPW+ RWER+ +G+ ++D+++ +K + K+++PWEKYD+MK+Y
Sbjct: 204 APVPVNDIKVVLRPRPWLERWERQNLRGVANIDEYLKDKHRLSAAKVQKPWEKYDMMKDY 263
Query: 218 RRTIPXXXXXXXXXXXXXXLHQXXXXXXXXXXXRVYVKPKK 258
R +IP LH R ++KPK+
Sbjct: 264 RSSIPEEEQTEIFAEVHTELHALELQRKRNKRKRTFIKPKQ 304
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 45/78 (57%), Positives = 59/78 (75%)
Query: 1 MIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNL 60
M+ RR ID+P F+VGS+L+VTS+D H KT +FVGICI + CGLR F+LRNV+D+
Sbjct: 90 MLDRRKQIDLPEFYVGSVLAVTSSDPHAAGKTSRFVGICINRDRCGLRARFILRNVIDHQ 149
Query: 61 GIEIAYDLYDPTIHNITV 78
G+E+ Y+LYDPTI I V
Sbjct: 150 GMEVVYELYDPTILKIEV 167
>WB|WBGene00022470 [details] [associations]
symbol:mrpl-19 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR001857 Pfam:PF01245 PROSITE:PS01015 GO:GO:0005739
GO:GO:0009792 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
HOGENOM:HOG000020439 EMBL:FO080992 RefSeq:NP_491381.1
ProteinModelPortal:Q95Y83 SMR:Q95Y83 STRING:Q95Y83 PaxDb:Q95Y83
EnsemblMetazoa:Y119C1B.4 GeneID:172052 KEGG:cel:CELE_Y119C1B.4
UCSC:Y119C1B.4 CTD:172052 WormBase:Y119C1B.4 eggNOG:NOG247570
GeneTree:ENSGT00390000009415 InParanoid:Q95Y83 OMA:DLYNPTI
NextBio:873823 Uniprot:Q95Y83
Length = 288
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 47/122 (38%), Positives = 66/122 (54%)
Query: 98 NVVDNLGIEIAYDMYDPTIHNITVXXXXXXXXXXXXXXXXXXPQYSTFPFDMEPEYLLDG 157
N ++N+G+E+ YD+Y+PTI I P+YSTF F MEP+ G
Sbjct: 127 NTIENIGVEVVYDLYNPTIKKIETLKLEKRLDNDLSYLVDALPEYSTFDFHMEPQAHPAG 186
Query: 158 APVPINDIKVKLKPRPWVGRWERKGYKGIDDVDQHITEKMKGQ-KKKLEEPWEKYDLMKE 216
P+P+N+ KVKLK PW RWE +GI+D T K + K + +EKYDL+ +
Sbjct: 187 TPIPVNECKVKLKTPPWTRRWEVASVRGIEDTWTQATPWFKRKLHKTIVNDYEKYDLIAD 246
Query: 217 YR 218
YR
Sbjct: 247 YR 248
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 42/76 (55%), Positives = 60/76 (78%)
Query: 1 MIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNL 60
M++RR IDIP F+VGSI++VTS+DK+ +K +FVGICI++ GL H+F LRN ++N+
Sbjct: 73 MLERRMNIDIPEFYVGSIVAVTSSDKNLGSKEHRFVGICIRREKEGLLHQFTLRNTIENI 132
Query: 61 GIEIAYDLYDPTIHNI 76
G+E+ YDLY+PTI I
Sbjct: 133 GVEVVYDLYNPTIKKI 148
>ZFIN|ZDB-GENE-040801-55 [details] [associations]
symbol:mrpl19 "mitochondrial ribosomal protein L19"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061
ZFIN:ZDB-GENE-040801-55 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 EMBL:BX322665 PANTHER:PTHR15680
GeneTree:ENSGT00390000009415 IPI:IPI00490324
Ensembl:ENSDART00000124388 ArrayExpress:F1R7V6 Bgee:F1R7V6
Uniprot:F1R7V6
Length = 291
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 47/122 (38%), Positives = 68/122 (55%)
Query: 98 NVVDNLGIEIAYDMYDPTIHNITVXXXXXXXXXXXXXXXXXXPQYSTFPFDMEPEYLLDG 157
NV+D G+EI Y++Y P + I V P+YSTF FDM+P +
Sbjct: 152 NVIDGQGVEICYELYSPRMRKIEVLKLEKRLDDNLMYLRDALPEYSTFDFDMQPVHYELT 211
Query: 158 APVPINDIKVKLKPRPWVGRWERKGY--KGIDDVDQHITEKMKGQKKKLEEPWEKYDLMK 215
+P+N +KVK+KP+PW RWER + KGI D ++T + +K EPW +YD++K
Sbjct: 212 KDIPVNPLKVKMKPKPWSKRWERPKFDIKGIR-FDLYLTPEQMEHAQKWGEPWREYDMLK 270
Query: 216 EY 217
EY
Sbjct: 271 EY 272
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 39/78 (50%), Positives = 51/78 (65%)
Query: 1 MIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNL 60
MI+RR V+ IP F+VGSIL+VT D + +FVGIC Q+ GL F+LRNV+D
Sbjct: 98 MIQRRKVLQIPEFYVGSILAVTMTDPYASGNLNRFVGICTQRSGKGLGATFILRNVIDGQ 157
Query: 61 GIEIAYDLYDPTIHNITV 78
G+EI Y+LY P + I V
Sbjct: 158 GVEICYELYSPRMRKIEV 175
>UNIPROTKB|F1NEW6 [details] [associations]
symbol:MRPL19 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:AADN02018161
IPI:IPI00592787 Ensembl:ENSGALT00000026999 Uniprot:F1NEW6
Length = 253
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 42/120 (35%), Positives = 69/120 (57%)
Query: 98 NVVDNLGIEIAYDMYDPTIHNITVXXXXXXXXXXXXXXXXXXPQYSTFPFDMEPEYLLDG 157
NV+++ G+EI Y++Y P I ITV P+YSTF +M+P LD
Sbjct: 116 NVIEDQGVEICYELYSPRIQEITVLKLEKRLDDNLTYLRDALPEYSTFDMNMKPVSHLDH 175
Query: 158 APVPINDIKVKLKPRPWVGRWERKGYKGIDDVDQHITEKMKGQKKKLEEPWEKYDLMKEY 217
+P+N ++V++KP+PW RWER Y I + + EK + +K ++PW ++D+++EY
Sbjct: 176 EEIPVNKLQVRMKPKPWSKRWERPKYN-IKGIKFELPEKKMKEAQKWKQPWLEFDMLREY 234
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 45/78 (57%), Positives = 58/78 (74%)
Query: 1 MIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNL 60
MI+RR V +IP F+VGSIL+VT+AD + KT +FVGICIQ+ GL FVLRNV+++
Sbjct: 62 MIQRRKVFNIPEFYVGSILAVTTADPYADGKTNRFVGICIQRGGRGLGATFVLRNVIEDQ 121
Query: 61 GIEIAYDLYDPTIHNITV 78
G+EI Y+LY P I ITV
Sbjct: 122 GVEICYELYSPRIQEITV 139
>RGD|1587381 [details] [associations]
symbol:Mrpl19 "mitochondrial ribosomal protein L19"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA;ISO]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 RGD:1587381
GO:GO:0005739 GO:GO:0006412 GO:GO:0031965 GO:GO:0005840
GO:GO:0003735 EMBL:CH473957 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR15680 CTD:9801 OrthoDB:EOG4G4GR6
GeneTree:ENSGT00390000009415 IPI:IPI00190232 RefSeq:NP_001025069.1
UniGene:Rn.3438 Ensembl:ENSRNOT00000009308 GeneID:297372
KEGG:rno:297372 UCSC:RGD:1587381 Uniprot:D4A4A9
Length = 292
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 45/122 (36%), Positives = 69/122 (56%)
Query: 98 NVVDNLGIEIAYDMYDPTIHNITVXXXXXXXXXXXXXXXXXXPQYSTFPFDMEPEYLLDG 157
N ++ G+EI +++Y+P IH I V P+YSTF +M+P L
Sbjct: 153 NTIEGQGVEICFELYNPRIHEIQVVKLEKRLDDSLLYLRDALPEYSTFDVNMKPVPLESC 212
Query: 158 APVPINDIKVKLKPRPWVGRWERKGY--KGIDDVDQHITEKMKGQKKKLEEPWEKYDLMK 215
VP+N +KVK+KP+PW RWER + KGI D +TE+ + +K +PW ++D+M+
Sbjct: 213 QEVPVNKLKVKMKPKPWSKRWERPNFNIKGIR-FDLALTEEQMKEAQKWSKPWLEFDMMR 271
Query: 216 EY 217
EY
Sbjct: 272 EY 273
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 1 MIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNL 60
M+ RR V+ IP F+VGSIL VT+AD + KT +F+GICI++ GL F LRN ++
Sbjct: 99 MLDRRKVLPIPEFYVGSILRVTTADPYASGKTSQFLGICIKRSGSGLGATFTLRNTIEGQ 158
Query: 61 GIEIAYDLYDPTIHNITV 78
G+EI ++LY+P IH I V
Sbjct: 159 GVEICFELYNPRIHEIQV 176
>UNIPROTKB|P49406 [details] [associations]
symbol:MRPL19 "39S ribosomal protein L19, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IDA] InterPro:IPR001857 Pfam:PF01245
PRINTS:PR00061 PROSITE:PS01015 EMBL:AC005034 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
CleanEx:HS_MRPL15 CTD:9801 HOGENOM:HOG000020439 HOVERGEN:HBG023932
OrthoDB:EOG4G4GR6 EMBL:BC030144 EMBL:D14660 EMBL:AB051621
IPI:IPI00027096 RefSeq:NP_055578.2 UniGene:Hs.44024
ProteinModelPortal:P49406 SMR:P49406 IntAct:P49406
MINT:MINT-6492165 STRING:P49406 PhosphoSite:P49406 DMDM:92090636
PaxDb:P49406 PRIDE:P49406 DNASU:9801 Ensembl:ENST00000393909
Ensembl:ENST00000409374 GeneID:9801 KEGG:hsa:9801 UCSC:uc002snl.3
GeneCards:GC02P075873 HGNC:HGNC:14052 MIM:611832 neXtProt:NX_P49406
PharmGKB:PA30948 InParanoid:P49406 OMA:KRWERPN ChiTaRS:MRPL19
GenomeRNAi:9801 NextBio:36904 ArrayExpress:P49406 Bgee:P49406
CleanEx:HS_MRPL19 Genevestigator:P49406 Uniprot:P49406
Length = 292
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 43/122 (35%), Positives = 69/122 (56%)
Query: 98 NVVDNLGIEIAYDMYDPTIHNITVXXXXXXXXXXXXXXXXXXPQYSTFPFDMEPEYLLDG 157
NV++ G+EI +++Y+P + I V P+YSTF +M+P
Sbjct: 153 NVIEGQGVEICFELYNPRVQEIQVVKLEKRLDDSLLYLRDALPEYSTFDVNMKPVVQEPN 212
Query: 158 APVPINDIKVKLKPRPWVGRWERKGY--KGIDDVDQHITEKMKGQKKKLEEPWEKYDLMK 215
VP+N++KVK+KP+PW RWER + KGI D +TE+ + +K +PW ++D+M+
Sbjct: 213 QKVPVNELKVKMKPKPWSKRWERPNFNIKGIR-FDLCLTEQQMKEAQKWNQPWLEFDMMR 271
Query: 216 EY 217
EY
Sbjct: 272 EY 273
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 38/78 (48%), Positives = 55/78 (70%)
Query: 1 MIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNL 60
M++RR V+ IP F+VGSIL VT+AD + K +F+GICIQ+ GL F+LRNV++
Sbjct: 99 MLERRKVLHIPEFYVGSILRVTTADPYASGKISQFLGICIQRSGRGLGATFILRNVIEGQ 158
Query: 61 GIEIAYDLYDPTIHNITV 78
G+EI ++LY+P + I V
Sbjct: 159 GVEICFELYNPRVQEIQV 176
>UNIPROTKB|F1MMM8 [details] [associations]
symbol:MRPL19 "39S ribosomal protein L19, mitochondrial"
species:9913 "Bos taurus" [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
IPI:IPI00715557 UniGene:Bt.55433 GeneTree:ENSGT00390000009415
OMA:KRWERPN EMBL:DAAA02031026 Ensembl:ENSBTAT00000003312
Uniprot:F1MMM8
Length = 292
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 44/122 (36%), Positives = 67/122 (54%)
Query: 98 NVVDNLGIEIAYDMYDPTIHNITVXXXXXXXXXXXXXXXXXXPQYSTFPFDMEPEYLLDG 157
N ++ G+EI +++Y+P I I V P+YSTF +M+P
Sbjct: 153 NTIEGQGVEICFELYNPRIQEIQVVKLEKRLDDSLLYLRDALPEYSTFDMNMKPVAQEPS 212
Query: 158 APVPINDIKVKLKPRPWVGRWERKGY--KGIDDVDQHITEKMKGQKKKLEEPWEKYDLMK 215
VPIN +KVK+KP+PW RWER + KGI D +TE+ + +K +PW ++D+M+
Sbjct: 213 REVPINQLKVKMKPKPWSKRWERPKFNVKGIR-FDLCLTEEQMKEAQKWSQPWLEFDMMR 271
Query: 216 EY 217
EY
Sbjct: 272 EY 273
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 38/78 (48%), Positives = 55/78 (70%)
Query: 1 MIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNL 60
M++RR ++ IP F+VGSIL VT+AD + KT +F+GICIQ+ GL F+LRN ++
Sbjct: 99 MLERRKILHIPEFYVGSILRVTTADPYANGKTSQFLGICIQRSGKGLGATFILRNTIEGQ 158
Query: 61 GIEIAYDLYDPTIHNITV 78
G+EI ++LY+P I I V
Sbjct: 159 GVEICFELYNPRIQEIQV 176
>UNIPROTKB|Q2HJI0 [details] [associations]
symbol:MRPL19 "39S ribosomal protein L19, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061
PROSITE:PS01015 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335
PANTHER:PTHR15680 PDB:2FTC PDBsum:2FTC EMBL:BC105368
IPI:IPI00715557 RefSeq:NP_001039533.1 UniGene:Bt.55433
ProteinModelPortal:Q2HJI0 STRING:Q2HJI0 PRIDE:Q2HJI0 GeneID:510957
KEGG:bta:510957 CTD:9801 HOGENOM:HOG000020439 HOVERGEN:HBG023932
InParanoid:Q2HJI0 OrthoDB:EOG4G4GR6 EvolutionaryTrace:Q2HJI0
NextBio:20869701 Uniprot:Q2HJI0
Length = 292
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 44/122 (36%), Positives = 67/122 (54%)
Query: 98 NVVDNLGIEIAYDMYDPTIHNITVXXXXXXXXXXXXXXXXXXPQYSTFPFDMEPEYLLDG 157
N ++ G+EI +++Y+P I I V P+YSTF +M+P
Sbjct: 153 NTIEGQGVEICFELYNPRIQEIQVVKLEKRLDDSLLYLRDALPEYSTFDMNMKPVAQEPS 212
Query: 158 APVPINDIKVKLKPRPWVGRWERKGY--KGIDDVDQHITEKMKGQKKKLEEPWEKYDLMK 215
VPIN +KVK+KP+PW RWER + KGI D +TE+ + +K +PW ++D+M+
Sbjct: 213 REVPINQLKVKMKPKPWSKRWERPKFNVKGIR-FDLCLTEEQMKEAQKWSQPWLEFDMMR 271
Query: 216 EY 217
EY
Sbjct: 272 EY 273
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 38/78 (48%), Positives = 55/78 (70%)
Query: 1 MIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNL 60
M++RR ++ IP F+VGSIL VT+AD + KT +F+GICIQ+ GL F+LRN ++
Sbjct: 99 MLERRKILHIPEFYVGSILRVTTADPYANGKTSQFLGICIQRSGKGLGATFILRNTIEGQ 158
Query: 61 GIEIAYDLYDPTIHNITV 78
G+EI ++LY+P I I V
Sbjct: 159 GVEICFELYNPRIQEIQV 176
>UNIPROTKB|I3LNJ0 [details] [associations]
symbol:MRPL19 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:FP326655
RefSeq:XP_003354803.1 Ensembl:ENSSSCT00000023158 GeneID:100625069
KEGG:ssc:100625069 Uniprot:I3LNJ0
Length = 292
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 43/122 (35%), Positives = 67/122 (54%)
Query: 98 NVVDNLGIEIAYDMYDPTIHNITVXXXXXXXXXXXXXXXXXXPQYSTFPFDMEPEYLLDG 157
N ++ G+EI +++Y+P I I V P+YSTF +M+P
Sbjct: 153 NTIEGQGVEICFELYNPRIQEIQVVKLEKRLDNSLLYLRDALPEYSTFDVNMKPITQEFN 212
Query: 158 APVPINDIKVKLKPRPWVGRWERKGY--KGIDDVDQHITEKMKGQKKKLEEPWEKYDLMK 215
VP+N +KVK+KP+PW RWER + KGI D +TE+ + +K +PW ++D+M+
Sbjct: 213 QEVPVNQLKVKMKPKPWSKRWERPKFNIKGIR-FDLCLTEEQMREAQKWSQPWLEFDMMR 271
Query: 216 EY 217
EY
Sbjct: 272 EY 273
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 38/78 (48%), Positives = 55/78 (70%)
Query: 1 MIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNL 60
M++RR ++ IP F+VGSIL VT+AD + KT +F+GICIQ+ GL F+LRN ++
Sbjct: 99 MLERRKILHIPEFYVGSILRVTTADPYASAKTSQFLGICIQRSGSGLGATFILRNTIEGQ 158
Query: 61 GIEIAYDLYDPTIHNITV 78
G+EI ++LY+P I I V
Sbjct: 159 GVEICFELYNPRIQEIQV 176
>MGI|MGI:1926274 [details] [associations]
symbol:Mrpl19 "mitochondrial ribosomal protein L19"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005761 "mitochondrial ribosome" evidence=ISS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=ISO] InterPro:IPR001857
Pfam:PF01245 PRINTS:PR00061 PROSITE:PS01015 MGI:MGI:1926274
GO:GO:0006412 GO:GO:0031965 GO:GO:0003735 GO:GO:0005761
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
CTD:9801 HOVERGEN:HBG023932 OrthoDB:EOG4G4GR6
GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:AK018508
EMBL:AK050637 EMBL:BC020315 EMBL:BC043921 IPI:IPI00989172
RefSeq:NP_080766.1 UniGene:Mm.276293 ProteinModelPortal:Q9D338
SMR:Q9D338 STRING:Q9D338 PhosphoSite:Q9D338 PaxDb:Q9D338
PRIDE:Q9D338 Ensembl:ENSMUST00000032124 GeneID:56284 KEGG:mmu:56284
UCSC:uc009clf.1 InParanoid:Q9D338 NextBio:312188 Bgee:Q9D338
CleanEx:MM_MRPL19 Genevestigator:Q9D338
GermOnline:ENSMUSG00000030045 Uniprot:Q9D338
Length = 292
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 43/122 (35%), Positives = 67/122 (54%)
Query: 98 NVVDNLGIEIAYDMYDPTIHNITVXXXXXXXXXXXXXXXXXXPQYSTFPFDMEPEYLLDG 157
N ++ G+EI +++Y+P I I V P+YSTF +M+P
Sbjct: 153 NTIEGQGVEICFELYNPRIQEIQVVKLEKRLDDNLLYLRDALPEYSTFDVNMKPVPQEAC 212
Query: 158 APVPINDIKVKLKPRPWVGRWERKGY--KGIDDVDQHITEKMKGQKKKLEEPWEKYDLMK 215
VP+N +KVK+KP+PW RWER + KGI D +TE+ + +K +PW ++D+M+
Sbjct: 213 QEVPVNKLKVKMKPKPWSKRWERPNFNIKGIR-FDLALTEEQMKEAQKWNKPWIEFDMMR 271
Query: 216 EY 217
EY
Sbjct: 272 EY 273
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 38/78 (48%), Positives = 53/78 (67%)
Query: 1 MIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNL 60
M+ RR V+ IP F+VGSIL VT+AD + KT +F+GICI++ GL F LRN ++
Sbjct: 99 MLDRRKVLPIPEFYVGSILRVTTADPYASGKTSQFLGICIKRSGNGLGATFTLRNTIEGQ 158
Query: 61 GIEIAYDLYDPTIHNITV 78
G+EI ++LY+P I I V
Sbjct: 159 GVEICFELYNPRIQEIQV 176
>UNIPROTKB|E2R077 [details] [associations]
symbol:MRPL19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001857
Pfam:PF01245 PRINTS:PR00061 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
CTD:9801 GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:AAEX03010959
RefSeq:XP_532990.2 Ensembl:ENSCAFT00000013000 GeneID:475780
KEGG:cfa:475780 Uniprot:E2R077
Length = 292
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 42/122 (34%), Positives = 66/122 (54%)
Query: 98 NVVDNLGIEIAYDMYDPTIHNITVXXXXXXXXXXXXXXXXXXPQYSTFPFDMEPEYLLDG 157
N ++ G+EI +++Y+P I I V P+YSTF +M+P
Sbjct: 153 NTIEGQGVEICFELYNPRIQEIQVIKLEKRLDDSLLYLRDALPEYSTFDMNMKPVAHEPS 212
Query: 158 APVPINDIKVKLKPRPWVGRWERKGY--KGIDDVDQHITEKMKGQKKKLEEPWEKYDLMK 215
VP+N +KVK+KP+PW RWER + KGI D +TE+ + +K +PW ++D+M+
Sbjct: 213 HEVPVNQLKVKMKPKPWSKRWERPKFNIKGIR-FDLCLTEEKMKEAQKWSQPWLEFDMMR 271
Query: 216 EY 217
Y
Sbjct: 272 TY 273
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 1 MIKRRSVIDIPSFFVGSILSVTSADKHDPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNL 60
M++RR ++ IP F+VGSIL VT+AD + K +F+GICIQ+ GL F+LRN ++
Sbjct: 99 MLERRKILHIPEFYVGSILRVTTADLYANGKASQFLGICIQRSGAGLGATFILRNTIEGQ 158
Query: 61 GIEIAYDLYDPTIHNITV 78
G+EI ++LY+P I I V
Sbjct: 159 GVEICFELYNPRIQEIQV 176
>UNIPROTKB|H7C2J0 [details] [associations]
symbol:MRPL19 "39S ribosomal protein L19, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001857 EMBL:AC005034 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR15680
HGNC:HGNC:14052 ChiTaRS:MRPL19 ProteinModelPortal:H7C2J0
Ensembl:ENST00000453233 Bgee:H7C2J0 Uniprot:H7C2J0
Length = 79
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 160 VPINDIKVKLKPRPWVGRWERKGY--KGIDDVDQHITEKMKGQKKKLEEPWEKYDLMKEY 217
VP+N++KVK+KP+PW RWER + KGI D +TE+ + +K +PW ++D+M+EY
Sbjct: 2 VPVNELKVKMKPKPWSKRWERPNFNIKGIR-FDLCLTEQQMKEAQKWNQPWLEFDMMREY 60
>TIGR_CMR|GSU_0648 [details] [associations]
symbol:GSU_0648 "ribosomal protein L19" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_00402
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
HOGENOM:HOG000016264 RefSeq:NP_951705.1 ProteinModelPortal:Q74FG1
SMR:Q74FG1 GeneID:2687158 KEGG:gsu:GSU0648 PATRIC:22024043
BioCyc:GSUL243231:GH27-658-MONOMER Uniprot:Q74FG1
Length = 118
Score = 115 (45.5 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 9 DIPSFFVGSILSV-TSADKHDPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNLGIEIAYD 67
+IP F G L V + D ++ + F G+CI ++ G+R F +R + +N+G+E +
Sbjct: 15 NIPPFKPGDTLKVHVKIVEGDKSRIQAFQGVCISRQNGGIRESFTVRKISNNIGVERVFP 74
Query: 68 LYDPTIHNITV 78
L+ PT+ I V
Sbjct: 75 LHSPTVDAIEV 85
>TIGR_CMR|CJE_0814 [details] [associations]
symbol:CJE_0814 "ribosomal protein L19" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_00402
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
RefSeq:YP_178818.1 ProteinModelPortal:Q5HV67 STRING:Q5HV67
GeneID:3230764 KEGG:cjr:CJE0814 PATRIC:20043373
HOGENOM:HOG000016264 BioCyc:CJEJ195099:GJC0-829-MONOMER
Uniprot:Q5HV67
Length = 118
Score = 107 (42.7 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 9 DIPSFFVGSILSVTSADKH-DPNKTRKFVGICIQKRYCGLRHEFVLRNV-VDNLGIEIAY 66
++P F G L + K D + + F GICI +R G+ F++R + +N+G+E +
Sbjct: 18 NVPDFRAGDTLKLAIRIKEGDKTRIQNFEGICIARRGNGVSETFIVRKIGANNVGVERIF 77
Query: 67 DLYDPTIHNITV 78
+Y ++ +ITV
Sbjct: 78 PIYSESLESITV 89
>TIGR_CMR|CBU_0442 [details] [associations]
symbol:CBU_0442 "ribosomal protein L19" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] HAMAP:MF_00402 InterPro:IPR001857
InterPro:IPR018257 Pfam:PF01245 PIRSF:PIRSF002191 PRINTS:PR00061
PROSITE:PS01015 GO:GO:0006412 GO:GO:0005840 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680 TIGRFAMs:TIGR01024
KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338 HOGENOM:HOG000016264
RefSeq:NP_819479.1 ProteinModelPortal:Q83E85 SMR:Q83E85
GeneID:1208326 KEGG:cbu:CBU_0442 PATRIC:17929575
BioCyc:CBUR227377:GJ7S-440-MONOMER Uniprot:Q83E85
Length = 115
Score = 97 (39.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 9 DIPSFFVGSILSVTSADKH-DPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNLGIEIAYD 67
+IP F G ++V K + + + F G+ I +R+ GL F +R V G+E +
Sbjct: 17 EIPDFRAGDTVTVQVKVKEGNRERLQAFEGVVIARRHRGLNSSFTVRKVSHGEGVERVFQ 76
Query: 68 LYDPTIHNITV 78
LY P I +I V
Sbjct: 77 LYSPLIASIKV 87
>TIGR_CMR|SO_1360 [details] [associations]
symbol:SO_1360 "ribosomal protein L19" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00402 InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
HOGENOM:HOG000016264 RefSeq:NP_716980.1 ProteinModelPortal:Q8EH70
SMR:Q8EH70 GeneID:1169181 KEGG:son:SO_1360 PATRIC:23522374
Uniprot:Q8EH70
Length = 117
Score = 97 (39.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 9 DIPSFFVGSILSVTSADKH-DPNKTRKFVGICIQKRYCGLRHEFVLRNVVDNLGIEIAYD 67
D+P+F G + V K D + + F G+ I KR GL F +R + + G+E A+
Sbjct: 16 DVPAFGAGDTVVVQVRVKEGDKERLQAFEGVVIAKRNRGLHSAFTVRKISNGEGVERAFQ 75
Query: 68 LYDPTIHNITV 78
+ P I +I V
Sbjct: 76 THSPLIASIEV 86
>TIGR_CMR|ECH_0004 [details] [associations]
symbol:ECH_0004 "ribosomal protein L19" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
HAMAP:MF_00402 InterPro:IPR001857 Pfam:PF01245 PIRSF:PIRSF002191
PRINTS:PR00061 PROSITE:PS01015 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 ProtClustDB:PRK05338
HOGENOM:HOG000016264 RefSeq:YP_506839.1 ProteinModelPortal:Q2GI94
STRING:Q2GI94 GeneID:3927864 KEGG:ech:ECH_0004 PATRIC:20575581
OMA:EAKRTLP BioCyc:ECHA205920:GJNR-4-MONOMER Uniprot:Q2GI94
Length = 125
Score = 92 (37.4 bits), Expect = 0.00029, P = 0.00029
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 9 DIPSFFVGSILSVTSADKHD--PNKTRKFVGICIQKRYCGLRHEFVLRNVVDNLGIEIAY 66
+IP F G L V S D + + F G+CI+++ GL F LR + N I++
Sbjct: 20 EIPKFSSGDTLRV-SMKIFDGVSERLQVFEGVCIKRKNNGLHSSFTLRKISYNESIQLQV 78
Query: 67 DLYDPTIHNITV 78
LY P + +I V
Sbjct: 79 FLYSPIVESIEV 90
>TIGR_CMR|NSE_0895 [details] [associations]
symbol:NSE_0895 "ribosomal protein L19" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000237 GenomeReviews:CP000237_GR
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 ProtClustDB:PRK05338
HOGENOM:HOG000016264 OMA:EAKRTLP RefSeq:YP_506761.1
ProteinModelPortal:Q2GCN5 STRING:Q2GCN5 GeneID:3931562
KEGG:nse:NSE_0895 PATRIC:22681781
BioCyc:NSEN222891:GHFU-898-MONOMER Uniprot:Q2GCN5
Length = 120
Score = 89 (36.4 bits), Expect = 0.00064, P = 0.00064
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 11 PSFFVGSILSVTSADKHDPNKTRKFVGICIQKRYCGLRHEFVLRNV-VDNLGIEIAYDLY 69
P F G +SV + +T+ F G+CI K G+ F LR + V ++ +E + LY
Sbjct: 22 PEFRAGYTMSVEFYVQGTSGRTQVFKGLCIGKSNKGVHSSFTLRKLSVHDVYVERTFRLY 81
Query: 70 DPTIHNITV 78
P+I +I+V
Sbjct: 82 WPSIKSISV 90
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.141 0.438 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 260 199 0.00085 111 3 11 22 0.48 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 593 (63 KB)
Total size of DFA: 177 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 17.10u 0.09s 17.19t Elapsed: 00:00:10
Total cpu time: 17.10u 0.09s 17.19t Elapsed: 00:00:11
Start: Thu Aug 15 11:57:41 2013 End: Thu Aug 15 11:57:52 2013