BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12659
(1051 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O60306|AQR_HUMAN Intron-binding protein aquarius OS=Homo sapiens GN=AQR PE=1 SV=4
Length = 1485
Score = 541 bits (1395), Expect = e-153, Method: Compositional matrix adjust.
Identities = 278/505 (55%), Positives = 337/505 (66%), Gaps = 99/505 (19%)
Query: 451 ISRHEKRSSQLEALNSMPLYPTQEIIWNENIVPTEYFSGEGCLALPKLNLQFLTLHDYLL 510
+SRHE+R SQ++ LN MPLYPT++IIW+ENIVPTEY+SGEGCLALPKLNLQFLTLHDYLL
Sbjct: 408 VSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLL 467
Query: 511 RNFNLFRLESTCRVNYVLAKRLDLLQEVERLQKSLDVSGDVAYTCETAGHFFLYQVLARW 570
RNFNLFRLEST + R D+ V R++ G V V W
Sbjct: 468 RNFNLFRLESTYEI------RQDIEDSVSRMKPWQSEYGGV--------------VFGGW 507
Query: 571 EKFLATVRQRKQDRRKPAVSRTNI------IREKQPSRVRADVIVNLNVKREIKGEWESL 624
+ +P V+ T + I E P+RVRADV +NLNV+ IK EWE L
Sbjct: 508 ARMA-----------QPIVAFTVVEVAKPNIGENWPTRVRADVTINLNVRDHIKDEWEGL 556
Query: 625 RKHDVCFLITLKPPLPIGTKISYKGPFLEQTGLTYVRGCEIEGMLDVNGRIIEDGPEPRP 684
RKHDVCFLIT++P P GTK + PF+EQ GL YVRGCEI+GMLD GR+IEDGPEPRP
Sbjct: 557 RKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGMLDDKGRVIEDGPEPRP 616
Query: 685 VLPGDTRTFRVMLDCNQYKEDLDNVAQ-GNEDVYETFNVLMRRKPKENNFKAVLETIRDL 743
L G++RTFRV LD NQY++D+ N Q G EDVYETFN++MRRKPKENNFKAVLETIR+L
Sbjct: 617 NLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRKPKENNFKAVLETIRNL 676
Query: 744 MNTECVVPDWLHDIILGYGDPGAAHYTEMPNEIATMDFNDTFLNMDHLRSSFPQAEIRVK 803
MNT+CVVPDWLHDIILGYGDP +AHY++MPN+IAT+DFNDTFL+++HL++SFP ++V
Sbjct: 677 MNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLSIEHLKASFPGHNVKVT 736
Query: 804 TDNPTKLVPPFKLTFHEIEAIRAG--------------MQPGLTLVVGP----------- 838
++P +PPF++TF +R+G + TL+V P
Sbjct: 737 VEDPALQIPPFRITF----PVRSGKGKKRKDADVEDEDTEEAKTLIVEPHVIPNRGPYPY 792
Query: 839 --------------------------------PGTGKTDVAVQIISNLYHNFPHQRTLIV 866
PGTGKTDVAVQIISN+YHNFP QRTLIV
Sbjct: 793 NQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIV 852
Query: 867 THSNQALNQLFEKIISLDVDERHLL 891
THSNQALNQLFEKI++LD+DERHLL
Sbjct: 853 THSNQALNQLFEKIMALDIDERHLL 877
Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust.
Identities = 222/299 (74%), Positives = 265/299 (88%), Gaps = 2/299 (0%)
Query: 135 EENEDEDVEMENKDGKPIITVEPHVIPSRGPYLFNEPRKNTIPFTPTQIEAIRAGMQPGL 194
++ +D DVE E+ + + VEPHVIP+RGPY +N+P++NTI FT TQIEAIRAGMQPGL
Sbjct: 759 KKRKDADVEDEDTEEAKTLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGL 818
Query: 195 TLVVGPPGTGKTDVAVQIISNLYHNFPHQRTLIVTHSNQALNQLFEKIISLDVDERHLLR 254
T+VVGPPGTGKTDVAVQIISN+YHNFP QRTLIVTHSNQALNQLFEKI++LD+DERHLLR
Sbjct: 819 TMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLR 878
Query: 255 LGHGEEALETEKDFSRYGRVNYVLAKRLDLLQEVERLQKSLDVSGDVAYTCETAGHFFLY 314
LGHGEE LETEKDFSRYGRVNYVLA+R++LL+EV+RLQKSL V GD +YTCETAG+FFLY
Sbjct: 879 LGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLY 938
Query: 315 QVLARWEKFLATVRPSDGKTVP-VKTIKTEFPFHGFFENAPKPLFKEKSYETDMEIAEGC 373
QV++RWE++++ V+ + G T+P V + T FPFH +F NAP+P+FK +SYE DMEIAEGC
Sbjct: 939 QVMSRWEEYISKVK-NKGSTLPDVTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGC 997
Query: 374 FRYIEKMFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRKELVDMGFSF 432
FR+I+K+FTQLEEFRA ELLRSGLDRSKYLLVKEAKIIAMTCTHAALKR +LV +GF +
Sbjct: 998 FRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKY 1056
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 65/70 (92%)
Query: 979 EEALETEKDFSRYGRVNYVLAKRLDLLQEVERLQKSLDVSGDVAYTCETAGHFFLYQVLA 1038
EE LETEKDFSRYGRVNYVLA+R++LL+EV+RLQKSL V GD +YTCETAG+FFLYQV++
Sbjct: 883 EEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMS 942
Query: 1039 RWEKFLATVR 1048
RWE++++ V+
Sbjct: 943 RWEEYISKVK 952
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 61/74 (82%)
Query: 7 QLLEMLKFYARFEISDETGDPLTDHDMTQIHYQNITSLQKAAFAKFPDLRSFSLANVASV 66
QLL+MLKFY FEI+D+TG+ LT+++MT IHY ITSLQ+AAFA FP+L F+L+NVA V
Sbjct: 300 QLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEV 359
Query: 67 DTRETLTKHFEPLT 80
DTRE+L K F PL+
Sbjct: 360 DTRESLVKFFGPLS 373
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 53/58 (91%)
Query: 523 RVNYVLAKRLDLLQEVERLQKSLDVSGDVAYTCETAGHFFLYQVLARWEKFLATVRQR 580
RVNYVLA+R++LL+EV+RLQKSL V GD +YTCETAG+FFLYQV++RWE++++ V+ +
Sbjct: 897 RVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNK 954
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 31/42 (73%)
Query: 943 LSPWKSEDGSPFFGGWARMAQPIVNFAVVEVAKPNIEEALET 984
+ PW+SE G FGGWARMAQPIV F VVEVAKPNI E T
Sbjct: 492 MKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPT 533
>sp|Q8CFQ3|AQR_MOUSE Intron-binding protein aquarius OS=Mus musculus GN=Aqr PE=2 SV=2
Length = 1481
Score = 539 bits (1389), Expect = e-152, Method: Compositional matrix adjust.
Identities = 278/505 (55%), Positives = 336/505 (66%), Gaps = 99/505 (19%)
Query: 451 ISRHEKRSSQLEALNSMPLYPTQEIIWNENIVPTEYFSGEGCLALPKLNLQFLTLHDYLL 510
+SRHE+R SQ++ LN MPLYPT++IIW+ENIVPTEY+SGEGCLALPKLNLQFLTLHDYLL
Sbjct: 408 VSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLL 467
Query: 511 RNFNLFRLESTCRVNYVLAKRLDLLQEVERLQKSLDVSGDVAYTCETAGHFFLYQVLARW 570
RNFNLFRLEST + R D+ V R++ G V V W
Sbjct: 468 RNFNLFRLESTYEI------RQDIEDSVSRMKPWQSEYGGV--------------VFGGW 507
Query: 571 EKFLATVRQRKQDRRKPAVSRTNI------IREKQPSRVRADVIVNLNVKREIKGEWESL 624
+ +P V+ T + I E P+RVRADV +NLNV+ IK EWE L
Sbjct: 508 ARMA-----------QPIVAFTVVEVAKPNIGENWPTRVRADVTINLNVRDHIKDEWEGL 556
Query: 625 RKHDVCFLITLKPPLPIGTKISYKGPFLEQTGLTYVRGCEIEGMLDVNGRIIEDGPEPRP 684
RKHDVCFLIT++P P GTK + PF+EQ GL YVRGCEI+GMLD GR+IEDGPEPRP
Sbjct: 557 RKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGMLDDKGRVIEDGPEPRP 616
Query: 685 VLPGDTRTFRVMLDCNQYKEDLDNVAQ-GNEDVYETFNVLMRRKPKENNFKAVLETIRDL 743
L G++RTFRV LD NQY++D+ N Q G EDVY+TFNV+MRRKPKENNFKAVLETIR+L
Sbjct: 617 NLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYDTFNVIMRRKPKENNFKAVLETIRNL 676
Query: 744 MNTECVVPDWLHDIILGYGDPGAAHYTEMPNEIATMDFNDTFLNMDHLRSSFPQAEIRVK 803
MNT+CVVPDWLHDIILGYGDP +AHY++MPN+IAT+DFNDTFL+++HL++SFP ++V
Sbjct: 677 MNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLSIEHLKASFPGHNVKVT 736
Query: 804 TDNPTKLVPPFKLTFHEIEAIRAG--------------MQPGLTLVVGP----------- 838
+P +PPF++TF +R+G + TL+V P
Sbjct: 737 VSDPALQIPPFRITF----PVRSGKGKKRKDADGEEDDTEEAKTLIVEPHVIPNRGPYPY 792
Query: 839 --------------------------------PGTGKTDVAVQIISNLYHNFPHQRTLIV 866
PGTGKTDVAVQIISN+YHNFP QRTLIV
Sbjct: 793 NQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIV 852
Query: 867 THSNQALNQLFEKIISLDVDERHLL 891
THSNQALNQLFEKI++LD+DERHLL
Sbjct: 853 THSNQALNQLFEKIMALDIDERHLL 877
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 217/302 (71%), Positives = 259/302 (85%), Gaps = 4/302 (1%)
Query: 135 EENEDEDVEMENKDGKPIITVEPHVIPSRGPYLFNEPRKNTIPFTPTQIEAIRAGMQPGL 194
++ +D D E ++ + + VEPHVIP+RGPY +N+P++NTI FT TQIEAIRAGMQPGL
Sbjct: 759 KKRKDADGEEDDTEEAKTLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGL 818
Query: 195 TLVVGPPGTGKTDVAVQIISNLYHNFPHQRTLIVTHSNQALNQLFEKIISLDVDERHLLR 254
T+VVGPPGTGKTDVAVQIISN+YHNFP QRTLIVTHSNQALNQLFEKI++LD+DERHLLR
Sbjct: 819 TMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLR 878
Query: 255 LGHGEEALETEKDFSRYGRVNYVLAKRLDLLQEVERLQKSLDVSGDVAYTCETAGHFFLY 314
LGHGEE LETEKDFSRYGRVNYVLA+R++LL+EV+RLQKSL V GD +YTCETAG+FFLY
Sbjct: 879 LGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLY 938
Query: 315 QVLARWEKFLATVRPSDGKTVPVKT----IKTEFPFHGFFENAPKPLFKEKSYETDMEIA 370
QV++RWE++++ V+ S + T FPFH +F NAP+P+FK +SYE DMEIA
Sbjct: 939 QVMSRWEEYMSRVKNSGTACPDAAPDAAQVATFFPFHEYFANAPQPIFKGRSYEEDMEIA 998
Query: 371 EGCFRYIEKMFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRKELVDMGF 430
EGCFR+I+K+FTQLEEFRA ELLRSGLDRSKYLLVKEAKIIAMTCTHAALKR +LV +GF
Sbjct: 999 EGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGF 1058
Query: 431 SF 432
+
Sbjct: 1059 KY 1060
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 66/73 (90%)
Query: 979 EEALETEKDFSRYGRVNYVLAKRLDLLQEVERLQKSLDVSGDVAYTCETAGHFFLYQVLA 1038
EE LETEKDFSRYGRVNYVLA+R++LL+EV+RLQKSL V GD +YTCETAG+FFLYQV++
Sbjct: 883 EEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMS 942
Query: 1039 RWEKFLATVRQTA 1051
RWE++++ V+ +
Sbjct: 943 RWEEYMSRVKNSG 955
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 60/74 (81%)
Query: 7 QLLEMLKFYARFEISDETGDPLTDHDMTQIHYQNITSLQKAAFAKFPDLRSFSLANVASV 66
QLL+MLKFY FEI+D+TG+ LT+++MT IHY ITSLQ+AAFA FP+L F+L+NVA V
Sbjct: 300 QLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEV 359
Query: 67 DTRETLTKHFEPLT 80
D R++L K F PL+
Sbjct: 360 DARDSLVKFFGPLS 373
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 52/56 (92%)
Query: 523 RVNYVLAKRLDLLQEVERLQKSLDVSGDVAYTCETAGHFFLYQVLARWEKFLATVR 578
RVNYVLA+R++LL+EV+RLQKSL V GD +YTCETAG+FFLYQV++RWE++++ V+
Sbjct: 897 RVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYMSRVK 952
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 31/42 (73%)
Query: 943 LSPWKSEDGSPFFGGWARMAQPIVNFAVVEVAKPNIEEALET 984
+ PW+SE G FGGWARMAQPIV F VVEVAKPNI E T
Sbjct: 492 MKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPT 533
>sp|O94508|CWF11_SCHPO Pre-mRNA-splicing factor cwf11 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf11 PE=1 SV=1
Length = 1284
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 141/293 (48%), Gaps = 25/293 (8%)
Query: 145 ENKDGKPIITVEPH-VIPSRGPYLFNEPRKNTIPFTPTQIEAIRAGMQPGLTLVVGPPGT 203
+NK + + H ++PS Y +N+ Q+E+I G QPGLT+V GP
Sbjct: 703 QNKISADVTASDRHFLLPSNRLYTYNDK----------QLESILRGSQPGLTMVNGPTRC 752
Query: 204 GKTDVAVQIISNLYHNFPHQRTLIVTHSNQALNQLFEKIISLDV-DERHLLRLGH--GEE 260
GK + +++ L P+ RT++++ SN ++N LF + + HLL L +E
Sbjct: 753 GKHVLVCKLLEVLQDTSPNDRTVVLSDSNFSMNTLFTLLEKARCFHQGHLLYLSDEGKDE 812
Query: 261 ALETEKDFSRYGRVNYVLAKRLDLLQEVERLQKSLDVSGDVAYTCETAGHFFLYQVLARW 320
LE RYG ++ ++K LL+E+ RL S+ G + +TA +F + W
Sbjct: 813 TLE------RYGTLSSWISKLPGLLREIGRLAASIQAPGSHDASPDTALYFRDAYIKRLW 866
Query: 321 EKFLATVRPSDGKTVPVKTIKTEFPFHGFFENAPKPLFKEKSYETDMEIAEGCFRYIEKM 380
EK+L TV D FPFH +F + K + + + + A + +E M
Sbjct: 867 EKYLNTVDDKDSVDA-----YNRFPFHSYFGDKSKRPIETYNKDNFFDYATKLYGELEYM 921
Query: 381 FTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRKELVDMGFSFS 433
F QLEE R F LLR D+ Y L ++++II T T + + L + GF F+
Sbjct: 922 FQQLEEIRPFGLLRYYEDQELYALCQQSRIIGCTWTSLSTRLGTLKEKGFCFN 974
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 29/184 (15%)
Query: 720 FNVLMRRKPKENNFKAVLETIRDLMNTECVVPDWLHDIILGYGDPGAAHYTEMPNE-IAT 778
FN + P+ N + L + L+N P W D+ LG+G P + PN + +
Sbjct: 608 FNFALVLSPEANKYWLDLNILVSLLNRAKEFPKWFEDLFLGFGTPDICAF---PNAGLNS 664
Query: 779 MDFNDTFLNMDHLRSSFPQAEI------------------RVKTDNPTK----LVPPFKL 816
+ + F ++ L+S P + ++ D L+P +L
Sbjct: 665 IYARNLFNTVEQLQSVLPNCHVPSNLSTESLLIKFYTNQNKISADVTASDRHFLLPSNRL 724
Query: 817 TFH---EIEAIRAGMQPGLTLVVGPPGTGKTDVAVQIISNLYHNFPHQRTLIVTHSNQAL 873
+ ++E+I G QPGLT+V GP GK + +++ L P+ RT++++ SN ++
Sbjct: 725 YTYNDKQLESILRGSQPGLTMVNGPTRCGKHVLVCKLLEVLQDTSPNDRTVVLSDSNFSM 784
Query: 874 NQLF 877
N LF
Sbjct: 785 NTLF 788
Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 990 RYGRVNYVLAKRLDLLQEVERLQKSLDVSGDVAYTCETAGHFFLYQVLARWEKFLATV 1047
RYG ++ ++K LL+E+ RL S+ G + +TA +F + WEK+L TV
Sbjct: 816 RYGTLSSWISKLPGLLREIGRLAASIQAPGSHDASPDTALYFRDAYIKRLWEKYLNTV 873
>sp|P02269|H2A_ASTRU Histone H2A OS=Asterias rubens PE=1 SV=2
Length = 125
Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKTRINPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|Q9LHQ5|H2A2_ARATH Probable histone H2A.2 OS=Arabidopsis thaliana GN=At3g20670 PE=1
SV=1
Length = 132
Score = 63.5 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR++ LA++ND ELS+LL DVTIA GGVMPNI S+ K
Sbjct: 75 NKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPK 120
>sp|P16104|H2AX_HUMAN Histone H2A.x OS=Homo sapiens GN=H2AFX PE=1 SV=2
Length = 143
Score = 63.5 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 39/54 (72%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKTLLSP 945
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K + P
Sbjct: 74 NKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTSATVGP 127
>sp|Q9C681|H2A1_ARATH Probable histone H2A.1 OS=Arabidopsis thaliana GN=At1g51060 PE=1
SV=1
Length = 132
Score = 63.5 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKTLLSPWKSED 950
+KK RI PR++ LA++ND ELS+LL DVTIA GGVMPNI ++ K KT S +ED
Sbjct: 75 NKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK--KTGASKPSAED 131
>sp|Q6WV67|H2A_MYTTR Histone H2A OS=Mytilus trossulus PE=3 SV=3
Length = 125
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|P27661|H2AX_MOUSE Histone H2A.x OS=Mus musculus GN=H2afx PE=1 SV=2
Length = 143
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 39/54 (72%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKTLLSP 945
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K + P
Sbjct: 74 NKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKSSATVGP 127
>sp|P40279|H2A_EUGGR Histone H2A OS=Euglena gracilis PE=2 SV=1
Length = 136
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLK 940
+KK RITPR+L LA++ND EL++LLS VTIA GGV+PNIQ + K K
Sbjct: 88 NKKKRITPRFLTLAVRNDEELNKLLSGVTIASGGVLPNIQQVLLKKKGK 136
>sp|Q07135|H2AO_CHITH Histone H2A, orphon OS=Chironomus thummi thummi PE=3 SV=2
Length = 125
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKT 941
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K ++
Sbjct: 73 NKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTES 122
>sp|P21896|H2A_CHITH Histone H2A OS=Chironomus thummi thummi PE=3 SV=2
Length = 125
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKT 941
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K ++
Sbjct: 73 NKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTES 122
>sp|P02268|H2A_SEPOF Histone H2A OS=Sepia officinalis PE=1 SV=2
Length = 125
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|P16886|H2AL_STRPU Late histone H2A.L3 OS=Strongylocentrotus purpuratus PE=1 SV=2
Length = 126
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LA++ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 74 NKKTRIIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 119
>sp|Q6WV88|H2A_MYTGA Histone H2A OS=Mytilus galloprovincialis PE=3 SV=3
Length = 125
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|Q8I0T3|H2A_MYTED Histone H2A OS=Mytilus edulis PE=3 SV=3
Length = 125
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|Q6WV69|H2A_MYTCH Histone H2A OS=Mytilus chilensis PE=3 SV=3
Length = 125
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|Q6WV66|H2A_MYTCA Histone H2A OS=Mytilus californianus PE=3 SV=3
Length = 125
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|P19178|H2A_PLADU Histone H2A OS=Platynereis dumerilii PE=3 SV=2
Length = 124
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|P27325|H2A_URECA Histone H2A OS=Urechis caupo PE=3 SV=2
Length = 125
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|Q6PV61|H2A_LITVA Histone H2A OS=Litopenaeus vannamei PE=1 SV=3
Length = 123
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKTRIVPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|P40281|H2A2_PEA Histone H2A.2 OS=Pisum sativum PE=2 SV=1
Length = 149
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 42/57 (73%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKTLLSPWKS 948
+KK RI+PR+LLLA++NDVEL +LL+ VTIA GGV+PNI + K ++ S KS
Sbjct: 82 NKKNRISPRHLLLAVRNDVELGKLLAGVTIAYGGVLPNINPVLLPKRTESAASAPKS 138
>sp|P02270|H2A_SIPNU Histone H2A OS=Sipunculus nudus PE=1 SV=2
Length = 124
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|P84057|H2A_TIGCA Histone H2A OS=Tigriopus californicus GN=His2A PE=3 SV=2
Length = 124
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|P84056|H2A_RHYAM Histone H2A OS=Rhynchosciara americana GN=His2A PE=3 SV=2
Length = 124
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|P84055|H2A_DROYA Histone H2A OS=Drosophila yakuba GN=His2A PE=2 SV=2
Length = 124
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|P84054|H2A_DROSI Histone H2A OS=Drosophila simulans GN=His2A PE=3 SV=2
Length = 124
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|P84051|H2A_DROME Histone H2A OS=Drosophila melanogaster GN=His2A PE=1 SV=2
Length = 124
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|P84053|H2A_DROHY Histone H2A OS=Drosophila hydei GN=His2A PE=3 SV=2
Length = 124
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|P84052|H2A_DROER Histone H2A OS=Drosophila erecta GN=His2A PE=3 SV=2
Length = 124
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LLS VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPK 118
>sp|Q8CGP7|H2A1K_MOUSE Histone H2A type 1-K OS=Mus musculus GN=Hist1h2ak PE=1 SV=3
Length = 130
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/50 (60%), Positives = 39/50 (78%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKT 941
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K +T
Sbjct: 74 NKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTET 123
>sp|Q9LD28|H2A6_ARATH Histone H2A.6 OS=Arabidopsis thaliana GN=RAT5 PE=1 SV=1
Length = 130
Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR++ LA++ND ELS+LL DVTIA GGVMPNI ++ K
Sbjct: 75 NKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120
>sp|O81826|H2A3_ARATH Probable histone H2A.3 OS=Arabidopsis thaliana GN=At4g27230 PE=1
SV=1
Length = 131
Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR++ LA++ND ELS+LL DVTIA GGVMPNI ++ K
Sbjct: 75 NKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120
>sp|P06897|H2A1_XENLA Histone H2A type 1 OS=Xenopus laevis PE=1 SV=2
Length = 130
Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKT 941
+KK RI PR+L LA++ND EL++LL VTIAQGGV+PNIQS+ K ++
Sbjct: 74 NKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKKTES 123
>sp|P0CC09|H2A2A_RAT Histone H2A type 2-A OS=Rattus norvegicus GN=Hist2h2aa3 PE=1 SV=1
Length = 130
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKT 941
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K ++
Sbjct: 74 NKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
>sp|Q6GSS7|H2A2A_MOUSE Histone H2A type 2-A OS=Mus musculus GN=Hist2h2aa1 PE=1 SV=3
Length = 130
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKT 941
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K ++
Sbjct: 74 NKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
>sp|Q6FI13|H2A2A_HUMAN Histone H2A type 2-A OS=Homo sapiens GN=HIST2H2AA3 PE=1 SV=3
Length = 130
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKT 941
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K ++
Sbjct: 74 NKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
>sp|P02262|H2A1_RAT Histone H2A type 1 OS=Rattus norvegicus PE=1 SV=2
Length = 130
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKT 941
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K ++
Sbjct: 74 NKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
>sp|Q9FJE8|H2A7_ARATH Probable histone H2A.7 OS=Arabidopsis thaliana GN=At5g59870 PE=1
SV=1
Length = 150
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKT 941
+KK RI PR+LLLAI+ND EL +LLS VTIA GGV+PNI S+ K T
Sbjct: 83 NKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKSAT 132
>sp|P09588|H2A_CAEEL Histone H2A OS=Caenorhabditis elegans GN=his-3 PE=1 SV=2
Length = 127
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 38/46 (82%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LA++ND EL++LL+ VTIAQGGV+PNIQ++ K
Sbjct: 75 NKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPK 120
>sp|P02263|H2A4_CHICK Histone H2A-IV OS=Gallus gallus PE=1 SV=2
Length = 129
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 37/46 (80%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K
Sbjct: 74 NKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPK 119
>sp|Q64522|H2A2B_MOUSE Histone H2A type 2-B OS=Mus musculus GN=Hist2h2ab PE=1 SV=3
Length = 130
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 9/62 (14%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKTLLSPWKSEDG 951
+KK RI PR+L LA++ND EL++LL VTIAQGGV+PNIQ+ +L P K+E
Sbjct: 74 NKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQA---------VLLPKKTESH 124
Query: 952 SP 953
P
Sbjct: 125 KP 126
>sp|P0C0S8|H2A1_HUMAN Histone H2A type 1 OS=Homo sapiens GN=HIST1H2AG PE=1 SV=2
Length = 130
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKT 941
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K ++
Sbjct: 74 NKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
>sp|P0C0S9|H2A1_BOVIN Histone H2A type 1 OS=Bos taurus PE=1 SV=2
Length = 130
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKT 941
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K ++
Sbjct: 74 NKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTES 123
>sp|Q8CGP5|H2A1F_MOUSE Histone H2A type 1-F OS=Mus musculus GN=Hist1h2af PE=1 SV=3
Length = 130
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKTLLSP 945
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K ++ P
Sbjct: 74 NKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKP 127
>sp|P69140|H2A_PARAN Histone H2A, gonadal OS=Parechinus angulosus PE=1 SV=2
Length = 126
Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 37/46 (80%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPK 118
>sp|P69139|H2A3_PSAMI Late histone H2A.3, gonadal OS=Psammechinus miliaris PE=1 SV=2
Length = 126
Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 37/46 (80%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K
Sbjct: 73 NKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPK 118
>sp|Q64598|H2A1F_RAT Histone H2A type 1-F OS=Rattus norvegicus PE=3 SV=3
Length = 130
Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKTLLSP 945
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K ++ P
Sbjct: 74 NKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKP 127
>sp|Q8IUE6|H2A2B_HUMAN Histone H2A type 2-B OS=Homo sapiens GN=HIST2H2AB PE=1 SV=3
Length = 130
Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 9/62 (14%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDKTLKTLLSPWKSEDG 951
+KK RI PR+L LA++ND EL++LL VTIAQGGV+PNIQ+ +L P K+E
Sbjct: 74 NKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQA---------VLLPKKTESH 124
Query: 952 SP 953
P
Sbjct: 125 KP 126
>sp|P13912|H2A_CAIMO Histone H2A OS=Cairina moschata PE=3 SV=2
Length = 129
Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 37/46 (80%)
Query: 892 HKKYRITPRYLLLAIKNDVELSQLLSDVTIAQGGVMPNIQSMKFDK 937
+KK RI PR+L LAI+ND EL++LL VTIAQGGV+PNIQ++ K
Sbjct: 74 NKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPK 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 398,573,798
Number of Sequences: 539616
Number of extensions: 17646499
Number of successful extensions: 74199
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 428
Number of HSP's that attempted gapping in prelim test: 72826
Number of HSP's gapped (non-prelim): 1443
length of query: 1051
length of database: 191,569,459
effective HSP length: 128
effective length of query: 923
effective length of database: 122,498,611
effective search space: 113066217953
effective search space used: 113066217953
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)