Query psy12687
Match_columns 143
No_of_seqs 154 out of 858
Neff 8.6
Searched_HMMs 46136
Date Fri Aug 16 17:03:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12687.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12687hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF08393 DHC_N2: Dynein heavy 99.9 3.2E-26 6.9E-31 182.5 5.5 135 5-143 126-264 (408)
2 PF14131 DUF4298: Domain of un 78.8 10 0.00023 24.0 5.6 40 81-120 5-44 (90)
3 COG5245 DYN1 Dynein, heavy cha 62.3 12 0.00026 36.2 4.1 77 57-143 584-662 (3164)
4 PF15225 IL32: Interleukin 32 60.2 42 0.00091 21.4 5.2 40 79-118 55-100 (104)
5 PF15110 TMEM141: TMEM141 prot 58.9 7.1 0.00015 25.0 1.6 12 103-114 81-92 (94)
6 PF04644 Motilin_ghrelin: Moti 49.8 16 0.00036 18.0 1.7 18 114-131 2-19 (28)
7 PF08333 DUF1725: Protein of u 44.1 6.4 0.00014 17.9 -0.2 15 105-119 3-17 (20)
8 PF05871 ESCRT-II: ESCRT-II co 41.8 22 0.00047 24.5 2.0 44 88-131 18-67 (139)
9 PF08651 DASH_Duo1: DASH compl 41.3 85 0.0018 19.3 6.5 36 82-117 28-63 (78)
10 PF07436 Curto_V3: Curtovirus 40.2 27 0.00059 21.5 2.0 24 112-135 24-47 (87)
11 PF12025 Phage_C: Phage protei 33.8 96 0.0021 18.3 3.5 29 83-111 25-53 (68)
12 cd07643 I-BAR_IMD_MIM Inverse 29.1 2.5E+02 0.0054 21.2 5.9 52 46-98 67-119 (231)
13 PF14131 DUF4298: Domain of un 25.0 1.7E+02 0.0038 18.3 4.0 14 83-96 21-34 (90)
14 PF13310 Virulence_RhuM: Virul 20.7 3.2E+02 0.007 21.0 5.2 75 50-136 162-251 (260)
No 1
>PF08393 DHC_N2: Dynein heavy chain, N-terminal region 2; InterPro: IPR013602 Dyneins are described as motor proteins of eukaryotic cells, as they can convert energy derived from the hydrolysis of ATP to force and movement along cytoskeletal polymers, such as microtubules. Dyneins generally contain one to three heavy chains, where each heavy chain consists of a C-terminal globular head, a flexible microtubule-binding stalk, and a flexible N-terminal tail known as the cargo-binding domain []. The two categories of dyneins are the axonemal dyneins, which produce the bending motions that propagate along cilia and flagella, and the cytosolic dyneins, which drive a variety of fundamental cellular processes including nuclear migration, organisation of the mitotic spindle, chromosome separation during mitosis, and the positioning and function of many intracellular organelles. Cytoplasmic dyneins contain several accessory subunits ranging from light to intermediate chains. This entry represents a region found C-terminal to the dynein heavy chain N-terminal region 1 (IPR013594 from INTERPRO) in many members of this family. No functions seem to have been attributed specifically to this region. ; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A.
Probab=99.92 E-value=3.2e-26 Score=182.45 Aligned_cols=135 Identities=32% Similarity=0.557 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCc---chhhhhhhhcccCcccccccccchhhhhHHHHHHHhhhhhHHHhhhH-HHhHHH
Q psy12687 5 EVKDEYMSSIKKAVVDFAIHDPR---EPQLSIMEKEQVPSLNPMLEMGSEFKDTFDQNKKKLDNSLFTIHPVL-SEMSNI 80 (143)
Q Consensus 5 ei~~dy~~~~kkaivd~vL~d~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~L~~l~~~~-s~~~~~ 80 (143)
+-.+.+..+..+|..|+.+++.+ ...|..+.+...++. +.+.+..++++++.+.|++++.++++|. |+|+++
T Consensus 126 ~~~~~I~~I~~~A~~E~~ie~~L~~i~~~W~~~~f~~~~~~----~~~~~il~~~~~i~~~led~~~~L~~m~~S~~~~~ 201 (408)
T PF08393_consen 126 DHEDKIEEISEQAQKEYKIEQSLEKIKEEWKNMEFEFVPYK----DKDVFILKNWDEIIQQLEDHLLTLQSMKSSPFVKP 201 (408)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-B-EEEEET----TT-CEEEE-CHHHHHHHHHHHHHHHHTCSSTTTTC
T ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhceeeeeccc----cchhheecchHHHHHHHHHHHHHHhcccccchhHH
Confidence 44677888999999999998876 466777666544333 2456778889999999999999999997 799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccCchhHhHHhHHHHhHHHHhhhhhhhcC
Q psy12687 81 WFKNFKDWEEKLMLLQEIIDEWVKVQQTWMYLEPIFSSPDIQAQMPEEGRRFSAMDKLTCVHT 143 (143)
Q Consensus 81 f~~~v~~w~~~L~~~~~~l~~w~~~Q~~W~~L~~if~~~~i~~~lp~e~~~F~~v~~~~~~~~ 143 (143)
|..++..|+++|+.++++|+.|++||++|+||+|||+++||+++||.|+++|..|++.|+.++
T Consensus 202 ~~~~v~~w~~~L~~~~~il~~w~~~Q~~W~yL~~if~~~di~~~lp~e~~~F~~i~~~~~~i~ 264 (408)
T PF08393_consen 202 FRDEVEEWEKKLNNIQEILEEWMEVQRKWMYLEPIFSSSDIKKQLPKEAKKFSSIDKEWRSIM 264 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHCCCTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHcChHHHHHH
Confidence 999999999999999999999999999999999999988999999999999999999999763
No 2
>PF14131 DUF4298: Domain of unknown function (DUF4298)
Probab=78.82 E-value=10 Score=23.99 Aligned_cols=40 Identities=25% Similarity=0.508 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccCchh
Q psy12687 81 WFKNFKDWEEKLMLLQEIIDEWVKVQQTWMYLEPIFSSPD 120 (143)
Q Consensus 81 f~~~v~~w~~~L~~~~~~l~~w~~~Q~~W~~L~~if~~~~ 120 (143)
.....+.|...|..+.+.++.|...|..-.-|..-++|++
T Consensus 5 me~~y~~~~~~l~~le~~l~~~~~~~~~~~~L~~YY~s~~ 44 (90)
T PF14131_consen 5 MEKIYNEWCELLEELEEALEKWQEAQPDYRKLRDYYGSEE 44 (90)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHh
Confidence 4566788999999999999999999999988888886654
No 3
>COG5245 DYN1 Dynein, heavy chain [Cytoskeleton]
Probab=62.31 E-value=12 Score=36.17 Aligned_cols=77 Identities=9% Similarity=-0.123 Sum_probs=52.2
Q ss_pred HHHHHHhhhhhHHHhhhH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccC-chhHhHHhHHHHhHHHH
Q psy12687 57 DQNKKKLDNSLFTIHPVL-SEMSNIWFKNFKDWEEKLMLLQEIIDEWVKVQQTWMYLEPIFS-SPDIQAQMPEEGRRFSA 134 (143)
Q Consensus 57 ~~~~~~L~~~L~~l~~~~-s~~~~~f~~~v~~w~~~L~~~~~~l~~w~~~Q~~W~~L~~if~-~~~i~~~lp~e~~~F~~ 134 (143)
+++++.+...|..+-.+- +.+ ++.. .+-+.+|+..+.+-- -.|+.++++.+ ..||...+|.+..+|..
T Consensus 584 ~~irewc~~~l~~~~~~~~a~~---~e~~-~d~~~~l~~~s~~~v------~~~ld~y~~~~~~~dl~~~ip~~~~~~~s 653 (3164)
T COG5245 584 DEIREWCSSVLSDDFLEERAVR---VERG-ADGARRLRASSGSPV------LRRLDEYLMMMSLEDLMPLIPHAVHRKMS 653 (3164)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHcC-ccHHHHHHhccCCcH------HHHHHHHHHHhhhhhhcccccHHHHHHHH
Confidence 344555555544444333 223 3333 455666666544322 57999999996 88999999999999999
Q ss_pred hhhhhhhcC
Q psy12687 135 MDKLTCVHT 143 (143)
Q Consensus 135 v~~~~~~~~ 143 (143)
+...++.|+
T Consensus 654 l~s~~~~i~ 662 (3164)
T COG5245 654 LVSGVRGIY 662 (3164)
T ss_pred HHhhhhhhh
Confidence 999998774
No 4
>PF15225 IL32: Interleukin 32
Probab=60.17 E-value=42 Score=21.37 Aligned_cols=40 Identities=18% Similarity=0.483 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHhHhcccCc
Q psy12687 79 NIWFKNFKDWEEKLML------LQEIIDEWVKVQQTWMYLEPIFSS 118 (143)
Q Consensus 79 ~~f~~~v~~w~~~L~~------~~~~l~~w~~~Q~~W~~L~~if~~ 118 (143)
..|-..+..|.++.-- +..+--.|.++|+.|..|..+|-|
T Consensus 55 Q~ww~~vlAWVkk~va~~~~ALv~av~A~Wk~fq~Fcc~la~l~~S 100 (104)
T PF15225_consen 55 QTWWQAVLAWVKKMVAAGMQALVSAVQALWKEFQSFCCSLAELLRS 100 (104)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777777543 466678899999999999988854
No 5
>PF15110 TMEM141: TMEM141 protein family; PDB: 2LOR_A.
Probab=58.90 E-value=7.1 Score=25.03 Aligned_cols=12 Identities=50% Similarity=0.974 Sum_probs=10.3
Q ss_pred HHHHHHHHhHhc
Q psy12687 103 VKVQQTWMYLEP 114 (143)
Q Consensus 103 ~~~Q~~W~~L~~ 114 (143)
.+||..|++||.
T Consensus 81 ~~Cq~~W~~lE~ 92 (94)
T PF15110_consen 81 QKCQNLWMFLET 92 (94)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 589999999984
No 6
>PF04644 Motilin_ghrelin: Motilin/ghrelin; InterPro: IPR006738 Motilin is a gastrointestinal regulatory polypeptide produced by motilin cells in the duodenal epithelium. It is released into the general circulation at about 100-min intervals during the inter-digestive state and is the most important factor in controlling the inter-digestive migrating contractions. Motilin also stimulates endogenous release of the endocrine pancreas []. This domain is also found in ghrelin, a growth hormone secretagogue synthesised by endocrine cells in the stomach. Ghrelin stimulates growth hormone secretagogue receptors in the pituitary. These receptors are distinct from the growth hormone-releasing hormone receptors, and thus provide a means of controlling pituitary growth hormone release by the gastrointestinal system [].; GO: 0005179 hormone activity, 0005576 extracellular region; PDB: 1LBJ_A.
Probab=49.81 E-value=16 Score=17.95 Aligned_cols=18 Identities=33% Similarity=0.549 Sum_probs=11.3
Q ss_pred cccCchhHhHHhHHHHhH
Q psy12687 114 PIFSSPDIQAQMPEEGRR 131 (143)
Q Consensus 114 ~if~~~~i~~~lp~e~~~ 131 (143)
|||.++|+++.=-.|+++
T Consensus 2 p~F~~~e~qr~QekE~nk 19 (28)
T PF04644_consen 2 PIFTSSEHQRMQEKERNK 19 (28)
T ss_dssp -TT-HHHHHHHHHHHHHH
T ss_pred CcccchHHHHHHHHHhcc
Confidence 789999988775555543
No 7
>PF08333 DUF1725: Protein of unknown function (DUF1725); InterPro: IPR013544 This domain is found at the C terminus of many eukaryotic and one bacterial sequence. Many of its members are annotated as being putative L1 retrotransposons or LINE-1 reverse transcriptase homologues. The region in question is found repeated in some family members.
Probab=44.14 E-value=6.4 Score=17.89 Aligned_cols=15 Identities=40% Similarity=0.581 Sum_probs=10.8
Q ss_pred HHHHHHhHhcccCch
Q psy12687 105 VQQTWMYLEPIFSSP 119 (143)
Q Consensus 105 ~Q~~W~~L~~if~~~ 119 (143)
+=.+|+.||+|--|+
T Consensus 3 F~~kWmeLE~IiLse 17 (20)
T PF08333_consen 3 FAGKWMELENIILSE 17 (20)
T ss_pred hHHHHHHHHHHHHHh
Confidence 346799999886543
No 8
>PF05871 ESCRT-II: ESCRT-II complex subunit; InterPro: IPR008570 This entry represents the vps25 subunit (vacuolar protein sorting-associated protein 25) of the endosome-associated complex ESCRT-II (Endosomal Sorting Complexes Required for Transport protein II). ESCRT (ESCRT-I, -II, -III) complexes orchestrate efficient sorting of ubiquitinated transmembrane receptors to lysosomes via multivesicular bodies (MVBs) []. ESCRT-II recruits the transport machinery for protein sorting at MVB []. In addition, the human ESCRT-II has been shown to form a complex with RNA polymerase II elongation factor ELL in order to exert transcriptional control activity. ESCRT-II transiently associates with the endosomal membrane and thereby initiates the formation of ESCRT-III, a membrane-associated protein complex that functions immediately downstream of ESCRT-II during sorting of MVB cargo. ESCRT-II in turn functions downstream of ESCRT-I, a protein complex that binds to ubiquitinated endosomal cargo []. ESCRT-II is a trilobal complex composed of two copies of vps25, one copy of vps22 and the C-terminal region of vps36. The crystal structure of vps25 revealed two winged-helix domains, the N-terminal domain of vps25 interacting with vps22 and vps35 [].; PDB: 1W7P_B 1U5T_D 1XB4_D 3HTU_E 3CUQ_C 2ZME_D.
Probab=41.78 E-value=22 Score=24.53 Aligned_cols=44 Identities=23% Similarity=0.438 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hH-----hcccCchhHhHHhHHHHhH
Q psy12687 88 WEEKLMLLQEIIDEWVKVQQTWM-YL-----EPIFSSPDIQAQMPEEGRR 131 (143)
Q Consensus 88 w~~~L~~~~~~l~~w~~~Q~~W~-~L-----~~if~~~~i~~~lp~e~~~ 131 (143)
+.+.|..=.+++-.|....+.|. .+ .|+|.++.|.+.||.|+.+
T Consensus 18 r~~Ql~~W~~lIl~y~~~~k~~~l~~~e~~~~~lF~N~~I~R~L~~e~~~ 67 (139)
T PF05871_consen 18 REKQLELWSDLILDYCRHHKIFRLSLSEALESPLFNNESINRRLSPEFIR 67 (139)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-SEEECHHHHCCCTTEETTTTEE--HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhceeeeecccccCCCCccCccccCCCCHHHHH
Confidence 33444444456666667777664 33 5999999999999999865
No 9
>PF08651 DASH_Duo1: DASH complex subunit Duo1; InterPro: IPR013960 The DASH complex is a ~10 subunit microtubule-binding complex that is transferred to the kinetochore prior to mitosis []. In Saccharomyces cerevisiae (Baker's yeast) DASH forms both rings and spiral structures on microtubules in vitro [, ].
Probab=41.26 E-value=85 Score=19.33 Aligned_cols=36 Identities=11% Similarity=0.281 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccC
Q psy12687 82 FKNFKDWEEKLMLLQEIIDEWVKVQQTWMYLEPIFS 117 (143)
Q Consensus 82 ~~~v~~w~~~L~~~~~~l~~w~~~Q~~W~~L~~if~ 117 (143)
...+..-.........+|+.|..++++=-|-..+..
T Consensus 28 ~~~~~~v~~~~~~t~~LLd~w~~IlSQte~~~~Ll~ 63 (78)
T PF08651_consen 28 KSNMNRVQETVESTNTLLDKWIRILSQTEHTQRLLL 63 (78)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 356666777888888999999999887666655553
No 10
>PF07436 Curto_V3: Curtovirus V3 protein; InterPro: IPR009997 This family consists of several Curtovirus V3 proteins of around 90 residues in length. The function of this family is unknown.
Probab=40.20 E-value=27 Score=21.51 Aligned_cols=24 Identities=21% Similarity=0.366 Sum_probs=20.6
Q ss_pred HhcccCchhHhHHhHHHHhHHHHh
Q psy12687 112 LEPIFSSPDIQAQMPEEGRRFSAM 135 (143)
Q Consensus 112 L~~if~~~~i~~~lp~e~~~F~~v 135 (143)
.++-|.|+.|.++|..-+.+|+.+
T Consensus 24 fYGTfqSgsiS~kLS~l~sr~DeL 47 (87)
T PF07436_consen 24 FYGTFQSGSISRKLSSLSSRFDEL 47 (87)
T ss_pred eeeeeccchHHHHHHHHHHHHHHH
Confidence 467788999999999999999864
No 11
>PF12025 Phage_C: Phage protein C; InterPro: IPR016407 This family of phage proteins is functionally uncharacterised. Proteins in this family are typically between 68 to 86 amino acids in length.; GO: 0019073 viral DNA genome packaging
Probab=33.81 E-value=96 Score=18.32 Aligned_cols=29 Identities=17% Similarity=0.429 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12687 83 KNFKDWEEKLMLLQEIIDEWVKVQQTWMY 111 (143)
Q Consensus 83 ~~v~~w~~~L~~~~~~l~~w~~~Q~~W~~ 111 (143)
.++.+=++.|+.+...+..|...-..|++
T Consensus 25 tDalDeEKwLNm~G~llkdWFryE~hfvh 53 (68)
T PF12025_consen 25 TDALDEEKWLNMLGALLKDWFRYEDHFVH 53 (68)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34556677789999999999999888864
No 12
>cd07643 I-BAR_IMD_MIM Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis. The IMD domain, also called Inverse-Bin/Amphiphysin/Rvs (I-BAR) domain, is a dimerization and lipid-binding module that bends membranes and induces membrane protrusions. Members of this subfamily include missing in metastasis (MIM) or metastasis suppressor 1 (MTSS1), metastasis suppressor 1-like (MTSSL) or ABBA (Actin-Bundling protein with BAIAP2 homology), and similar proteins. They contain an N-terminal IMD and a WASP homology 2 (WH2) actin-binding motif at the C-terminus. MIM was originally identified as a missing transcript from metastatic bladder and prostate cancer cells. It is a scaffold protein that functions in a signaling pathway between the PDGF receptor, Src kinases, and actin assembly. It may also function as a cofactor of the Sonic hedgehog (Shh) transcriptional pathway and may participate in tumor development and progression via this pathway. ABBA regulate
Probab=29.06 E-value=2.5e+02 Score=21.17 Aligned_cols=52 Identities=17% Similarity=0.287 Sum_probs=37.3
Q ss_pred ccccchhhhhHHHHHHHhhhhhHHHhhhH-HHhHHHHHHHHHHHHHHHHHHHHH
Q psy12687 46 LEMGSEFKDTFDQNKKKLDNSLFTIHPVL-SEMSNIWFKNFKDWEEKLMLLQEI 98 (143)
Q Consensus 46 ~~~~~~~~~~~~~~~~~L~~~L~~l~~~~-s~~~~~f~~~v~~w~~~L~~~~~~ 98 (143)
++.|.-... +......|+..+-..+.-+ ..++.+..+.+++|...+..++.-
T Consensus 67 kElG~~Ltr-i~~~hr~iE~~lk~f~~~L~~~lI~pLe~k~E~wkk~~~~ldKd 119 (231)
T cd07643 67 KEIGSALTR-MCMRHKSIETKLKQFTSALMDCLVNPLQEKIEEWKKVANQLDKD 119 (231)
T ss_pred hHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 344443333 4444455888888787554 788999999999999999887655
No 13
>PF14131 DUF4298: Domain of unknown function (DUF4298)
Probab=24.97 E-value=1.7e+02 Score=18.32 Aligned_cols=14 Identities=14% Similarity=0.411 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHHH
Q psy12687 83 KNFKDWEEKLMLLQ 96 (143)
Q Consensus 83 ~~v~~w~~~L~~~~ 96 (143)
.-+..|+.....+.
T Consensus 21 ~~l~~~~~~~~~~~ 34 (90)
T PF14131_consen 21 EALEKWQEAQPDYR 34 (90)
T ss_pred HHHHHHHHHHHHHH
Confidence 33334444333333
No 14
>PF13310 Virulence_RhuM: Virulence protein RhuM family
Probab=20.65 E-value=3.2e+02 Score=20.98 Aligned_cols=75 Identities=20% Similarity=0.255 Sum_probs=46.9
Q ss_pred chhhhhHHHHHHHh-hhhhHHHhhhHHHhHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhHhcccC-ch
Q psy12687 50 SEFKDTFDQNKKKL-DNSLFTIHPVLSEMSNIWFKNF--------KDWEEKLMLLQEIIDEWVKVQQTWMYLEPIFS-SP 119 (143)
Q Consensus 50 ~~~~~~~~~~~~~L-~~~L~~l~~~~s~~~~~f~~~v--------~~w~~~L~~~~~~l~~w~~~Q~~W~~L~~if~-~~ 119 (143)
.+-.....-+++.| ++-|..||.+++.|+++.+.++ .+|..+|..+.. +-. .+|+. .+
T Consensus 162 ~v~k~Dv~iAKNYL~e~El~~LNRlVs~yLD~AE~qA~~~~~mtM~DW~~~LD~fL~-------fn~-----~~iL~~aG 229 (260)
T PF13310_consen 162 RVRKSDVTIAKNYLNEDELDSLNRLVSMYLDFAEDQAERRKPMTMKDWIEKLDAFLQ-------FNE-----REILQGAG 229 (260)
T ss_pred CCcccchhHHhccccHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHH-------hCC-----CcccCCCC
Confidence 44444556666666 6778889999999999887764 567777665532 222 56773 45
Q ss_pred hHhHHhH-----HHHhHHHHhh
Q psy12687 120 DIQAQMP-----EEGRRFSAMD 136 (143)
Q Consensus 120 ~i~~~lp-----~e~~~F~~v~ 136 (143)
.|.+..- .|..+|....
T Consensus 230 kIS~e~A~~kA~~EYekf~~~q 251 (260)
T PF13310_consen 230 KISHEQAKEKAEAEYEKFRKRQ 251 (260)
T ss_pred hhhHHHHHHHHHHHHHHHHHHH
Confidence 4544333 3566666544
Done!