BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12688
(222 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|270004815|gb|EFA01263.1| ftz transcription factor 1 [Tribolium castaneum]
Length = 588
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 99/124 (79%), Gaps = 4/124 (3%)
Query: 75 NFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCG 134
N NN+ D SY+F S + +D+ G SY +T + PDTK+GIEELCPVCG
Sbjct: 61 NMNNL-DASYIFSSGASAISGVDM---GASYQISGPATSLTAGDLPDTKDGIEELCPVCG 116
Query: 135 DKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVG 194
DKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP+CRFQKCLEVG
Sbjct: 117 DKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVG 176
Query: 195 MKLE 198
MKLE
Sbjct: 177 MKLE 180
>gi|189235773|ref|XP_970369.2| PREDICTED: similar to ecdysone response nuclear receptor Ftz-F1
[Tribolium castaneum]
Length = 540
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 92/113 (81%)
Query: 86 FQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLL 145
F + GG++ + G SY +T + PDTK+GIEELCPVCGDKVSGYHYGLL
Sbjct: 54 FAANSGGASAISGVDMGASYQISGPATSLTAGDLPDTKDGIEELCPVCGDKVSGYHYGLL 113
Query: 146 TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 114 TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLE 166
>gi|194326123|emb|CAQ57670.1| nuclear receptor [Blattella germanica]
Length = 602
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/120 (72%), Positives = 98/120 (81%), Gaps = 9/120 (7%)
Query: 87 QSPGGGSTNMDLSSAGISYHP---FHTSTIAATP-----EHPDTKEGIEELCPVCGDKVS 138
+ GGG + M++++AG SY +T+A + PDTKEGIEELCPVCGDKVS
Sbjct: 54 EEAGGGGSTMEVAAAG-SYQASPGVSAATVAVVTGMTGGDLPDTKEGIEELCPVCGDKVS 112
Query: 139 GYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
GYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP+CRFQKCL+VGMKLE
Sbjct: 113 GYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLDVGMKLE 172
>gi|328711947|ref|XP_001945464.2| PREDICTED: nuclear hormone receptor FTZ-F1-like [Acyrthosiphon
pisum]
Length = 666
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 80/81 (98%), Positives = 80/81 (98%)
Query: 118 EHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
E PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT
Sbjct: 83 ELPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 142
Query: 178 QRKRCPFCRFQKCLEVGMKLE 198
QRKRCPFCRFQKCLEVGMKLE
Sbjct: 143 QRKRCPFCRFQKCLEVGMKLE 163
>gi|242019867|ref|XP_002430380.1| steroidogenic factor, putative [Pediculus humanus corporis]
gi|212515504|gb|EEB17642.1| steroidogenic factor, putative [Pediculus humanus corporis]
Length = 253
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/129 (71%), Positives = 104/129 (80%), Gaps = 10/129 (7%)
Query: 74 YNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATP----EHPDTKEGIEEL 129
YN N +D++ F SP GG +D+++ S P +TS + A+ + PDTK GIEEL
Sbjct: 115 YNSGN-IDSALCFYSPPGG---IDMAAGYQS--PQNTSLVLASSRSGGDIPDTKFGIEEL 168
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP+CRFQK
Sbjct: 169 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQK 228
Query: 190 CLEVGMKLE 198
CLEVGMKLE
Sbjct: 229 CLEVGMKLE 237
>gi|17979670|gb|AAL50351.1| nuclear hormone receptor betaFTZ-F1 [Manduca sexta]
Length = 582
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/119 (71%), Positives = 92/119 (77%), Gaps = 12/119 (10%)
Query: 80 VDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSG 139
+D SYLF + GG L +AG A + DTK+ IEELCPVCGDKVSG
Sbjct: 60 LDASYLFPTGPGGEAGAYLPAAG------------AVCDQTDTKDVIEELCPVCGDKVSG 107
Query: 140 YHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
YHYGLLTCESCKGFFKRTVQNKKVYTCVAER+CHIDKTQRKRCPFCRFQKCL+VGMKLE
Sbjct: 108 YHYGLLTCESCKGFFKRTVQNKKVYTCVAERACHIDKTQRKRCPFCRFQKCLDVGMKLE 166
>gi|357614860|gb|EHJ69333.1| nuclear hormone receptor betaFTZ-F1 [Danaus plexippus]
Length = 514
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/120 (70%), Positives = 93/120 (77%), Gaps = 12/120 (10%)
Query: 80 VDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSG 139
+D SYLF + G + L +AG T+ + DTK+ IEELCPVCGDKVSG
Sbjct: 58 LDASYLFPTGAGSESGAYLPAAG---------TVC---DQTDTKDVIEELCPVCGDKVSG 105
Query: 140 YHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
YHYGLLTCESCKGFFKRTVQNKKVYTCVAER+CHIDKTQRKRCPFCRFQKCL+VGMKLE
Sbjct: 106 YHYGLLTCESCKGFFKRTVQNKKVYTCVAERACHIDKTQRKRCPFCRFQKCLDVGMKLEA 165
>gi|341926128|dbj|BAK53999.1| nuclear hormone receptor [Bombyx mori]
Length = 541
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/125 (68%), Positives = 94/125 (75%), Gaps = 13/125 (10%)
Query: 74 YNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVC 133
+ + N+ D SYLF + GG L +AG + DTK+ IEELCPVC
Sbjct: 53 FGYANL-DASYLFPTGTGGEPGAYLPTAG------------TVCDQTDTKDVIEELCPVC 99
Query: 134 GDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEV 193
GDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER+CHIDKTQRKRCPFCRFQKCL+V
Sbjct: 100 GDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERACHIDKTQRKRCPFCRFQKCLDV 159
Query: 194 GMKLE 198
GMKLE
Sbjct: 160 GMKLE 164
>gi|5306097|gb|AAD41899.1| fushi tarazu-factor 1 [Metapenaeus ensis]
Length = 545
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/117 (72%), Positives = 91/117 (77%), Gaps = 17/117 (14%)
Query: 82 NSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYH 141
+S LF PG +T +D +S E PDTKEGIEELCPVCGDKVSGYH
Sbjct: 2 DSGLF--PGVATTTLDYTSLA---------------ELPDTKEGIEELCPVCGDKVSGYH 44
Query: 142 YGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
YGLLTCESCKGFFKRTVQNKKVYTCVA+RSC IDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 45 YGLLTCESCKGFFKRTVQNKKVYTCVADRSCQIDKTQRKRCPYCRFQKCLEVGMKLE 101
>gi|345494868|ref|XP_001600363.2| PREDICTED: nuclear hormone receptor FTZ-F1 [Nasonia vitripennis]
Length = 776
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 78/88 (88%), Positives = 81/88 (92%)
Query: 112 TIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERS 171
+I + PDTK+ IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERS
Sbjct: 276 SIPGPSDFPDTKDVIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERS 335
Query: 172 CHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CHIDKTQRKRCPFCRFQKCLEVGMKLE
Sbjct: 336 CHIDKTQRKRCPFCRFQKCLEVGMKLEA 363
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 36/46 (78%), Gaps = 4/46 (8%)
Query: 126 IEELCPVCGDKVSG-YHYGLLTCESCKGFFKRT---VQNKKVYTCV 167
+EE CP+CGDK+SG Y GLLTCESCKGFFKR +KKVYTC+
Sbjct: 121 LEERCPMCGDKMSGSYQLGLLTCESCKGFFKRNNPPCSSKKVYTCL 166
>gi|321466618|gb|EFX77612.1| hypothetical protein DAPPUDRAFT_305379 [Daphnia pulex]
Length = 472
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/102 (80%), Positives = 89/102 (87%), Gaps = 2/102 (1%)
Query: 99 SSAGISYHPFHTSTIAATPEH--PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKR 156
S +G S P TS ++T H PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKR
Sbjct: 9 SLSGPSSLPPGTSGGSSTGRHDLPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKR 68
Query: 157 TVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TVQNKK Y+CVA+RSCHIDK+QRKRCP+CRFQKCLEVGMKLE
Sbjct: 69 TVQNKKAYSCVADRSCHIDKSQRKRCPYCRFQKCLEVGMKLE 110
>gi|241569175|ref|XP_002402532.1| retinoic acid receptor gamma, putative [Ixodes scapularis]
gi|215502012|gb|EEC11506.1| retinoic acid receptor gamma, putative [Ixodes scapularis]
Length = 108
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 81/90 (90%), Positives = 85/90 (94%), Gaps = 3/90 (3%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P+ PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA+RSCHIDK
Sbjct: 19 PDAPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVADRSCHIDK 78
Query: 177 TQRKRCPFCRFQKCLEVGMKLE---VSSQS 203
+QRKRCPFCRFQKCL+VGMKLE VSS S
Sbjct: 79 SQRKRCPFCRFQKCLDVGMKLEDQYVSSAS 108
>gi|391332279|ref|XP_003740563.1| PREDICTED: nuclear hormone receptor FTZ-F1-like [Metaseiulus
occidentalis]
Length = 587
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/122 (68%), Positives = 94/122 (77%), Gaps = 6/122 (4%)
Query: 77 NNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDK 136
N M N +P G N L A IS P +++ +++ D+K+GIEELCPVCGDK
Sbjct: 28 NVMAVNGVSVSAPPGVVHNPSLELAVIS--PGNSALVSSA----DSKDGIEELCPVCGDK 81
Query: 137 VSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMK 196
VSGYHYGLLTCESCKGFFKRTVQNKKVY CVAERSCHIDK+QRKRCPFCRFQKCL VGMK
Sbjct: 82 VSGYHYGLLTCESCKGFFKRTVQNKKVYQCVAERSCHIDKSQRKRCPFCRFQKCLNVGMK 141
Query: 197 LE 198
LE
Sbjct: 142 LE 143
>gi|332025634|gb|EGI65796.1| Nuclear hormone receptor FTZ-F1 [Acromyrmex echinatior]
Length = 274
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/112 (75%), Positives = 90/112 (80%), Gaps = 4/112 (3%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGI-EELCPVCGDKVSGYHYGLLTC 147
P GG T L G+ T +I + PDTK+ I EELCPVCGDKVSGYHYGLLTC
Sbjct: 126 PTGGGT---LCHPGLGQVGIVTGSIPCPSDFPDTKDIIIEELCPVCGDKVSGYHYGLLTC 182
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP+CRFQKCLEVGMKLEV
Sbjct: 183 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEV 234
>gi|328776085|ref|XP_001122182.2| PREDICTED: nuclear hormone receptor FTZ-F1 [Apis mellifera]
Length = 690
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/90 (87%), Positives = 82/90 (91%), Gaps = 1/90 (1%)
Query: 110 TSTIAATPEHPDTKEGI-EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA 168
T +I E PDTK+ I EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA
Sbjct: 203 TGSIPCPSEFPDTKDIIIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA 262
Query: 169 ERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
ERSCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 263 ERSCHIDKTQRKRCPYCRFQKCLEVGMKLE 292
>gi|340716230|ref|XP_003396603.1| PREDICTED: nuclear hormone receptor FTZ-F1-like [Bombus terrestris]
Length = 680
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/90 (87%), Positives = 82/90 (91%), Gaps = 1/90 (1%)
Query: 110 TSTIAATPEHPDTKEGI-EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA 168
T +I E PDTK+ I EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA
Sbjct: 195 TGSIPCPSEFPDTKDIIIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA 254
Query: 169 ERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
ERSCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 255 ERSCHIDKTQRKRCPYCRFQKCLEVGMKLE 284
>gi|198465087|ref|XP_001353488.2| GA17924 [Drosophila pseudoobscura pseudoobscura]
gi|198150009|gb|EAL30999.2| GA17924 [Drosophila pseudoobscura pseudoobscura]
Length = 1057
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 79/90 (87%), Gaps = 4/90 (4%)
Query: 114 AATPEHP----DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
+ATP H D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE
Sbjct: 510 SATPGHGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 569
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
RSCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 570 RSCHIDKTQRKRCPYCRFQKCLEVGMKLEA 599
>gi|157126337|ref|XP_001654601.1| nuclear hormone receptor ftz-f1 (ftz-f1 alpha) [Aedes aegypti]
gi|108882573|gb|EAT46798.1| AAEL002062-PA [Aedes aegypti]
gi|156556069|emb|CAO79104.1| Ftz transcription factor [Aedes aegypti]
Length = 732
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/139 (62%), Positives = 97/139 (69%), Gaps = 18/139 (12%)
Query: 74 YNFNNMVDNSYLFQSPGGGSTNMDLSSAG-ISYHPFHTSTIAATP------------EHP 120
YNF D+ Y+F S GG N+ + + ++ P T+ I T +
Sbjct: 151 YNF----DSPYMF-SAGGYHDNISQTQSNYLAIPPSGTTAIEPTSLNNLNVVSAIQCDQT 205
Query: 121 DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK 180
D K IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER CHIDKTQRK
Sbjct: 206 DFKYFIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERQCHIDKTQRK 265
Query: 181 RCPFCRFQKCLEVGMKLEV 199
RCP+CRFQKCLEVGMKLE
Sbjct: 266 RCPYCRFQKCLEVGMKLEA 284
>gi|162952024|ref|NP_001037528.2| nuclear hormone receptor FTZ-F1 [Bombyx mori]
gi|44889025|sp|P49867.2|FTZF1_BOMMO RecName: Full=Nuclear hormone receptor FTZ-F1; AltName:
Full=BmFTZ-F1; AltName: Full=Nuclear receptor subfamily
5 group A member 3
gi|16903866|gb|AAL30663.1|AF426830_1 ecdysone response nuclear receptor Ftz-F1 [Bombyx mori]
Length = 534
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 74/81 (91%), Positives = 78/81 (96%)
Query: 118 EHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
+ DTK+ IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER+CHIDKT
Sbjct: 77 DQTDTKDVIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERACHIDKT 136
Query: 178 QRKRCPFCRFQKCLEVGMKLE 198
QRKRCPFCRFQKCL+VGMKLE
Sbjct: 137 QRKRCPFCRFQKCLDVGMKLE 157
>gi|195494509|ref|XP_002094868.1| GE22055 [Drosophila yakuba]
gi|194180969|gb|EDW94580.1| GE22055 [Drosophila yakuba]
Length = 1039
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 79/90 (87%), Gaps = 4/90 (4%)
Query: 114 AATPEHP----DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
+ATP H D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE
Sbjct: 500 SATPGHGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 559
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
RSCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 560 RSCHIDKTQRKRCPYCRFQKCLEVGMKLEA 589
>gi|433191|dbj|BAA01745.1| BmFTZ-F1 protein [Bombyx mori]
Length = 555
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 74/81 (91%), Positives = 78/81 (96%)
Query: 118 EHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
+ DTK+ IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER+CHIDKT
Sbjct: 77 DQTDTKDVIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERACHIDKT 136
Query: 178 QRKRCPFCRFQKCLEVGMKLE 198
QRKRCPFCRFQKCL+VGMKLE
Sbjct: 137 QRKRCPFCRFQKCLDVGMKLE 157
>gi|194871251|ref|XP_001972809.1| GG15724 [Drosophila erecta]
gi|190654592|gb|EDV51835.1| GG15724 [Drosophila erecta]
Length = 1039
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 79/90 (87%), Gaps = 4/90 (4%)
Query: 114 AATPEHP----DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
+ATP H D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE
Sbjct: 500 SATPGHGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 559
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
RSCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 560 RSCHIDKTQRKRCPYCRFQKCLEVGMKLEA 589
>gi|312374175|gb|EFR21792.1| hypothetical protein AND_16364 [Anopheles darlingi]
Length = 491
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/117 (70%), Positives = 89/117 (76%), Gaps = 2/117 (1%)
Query: 84 YLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATP--EHPDTKEGIEELCPVCGDKVSGYH 141
YL G ++ + SS G S ++A P + D K IEELCPVCGDKVSGYH
Sbjct: 291 YLAIPASGTTSGTNCSSGGEPTALTSLSAVSAIPRCDQTDIKYFIEELCPVCGDKVSGYH 350
Query: 142 YGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
YGLLTCESCKGFFKRTVQNKKVYTCVAER CHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 351 YGLLTCESCKGFFKRTVQNKKVYTCVAERQCHIDKTQRKRCPYCRFQKCLEVGMKLE 407
>gi|195591348|ref|XP_002085404.1| GD12327 [Drosophila simulans]
gi|194197413|gb|EDX10989.1| GD12327 [Drosophila simulans]
Length = 1024
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 79/90 (87%), Gaps = 4/90 (4%)
Query: 114 AATPEHP----DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
+ATP H D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE
Sbjct: 485 SATPGHGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 544
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
RSCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 545 RSCHIDKTQRKRCPYCRFQKCLEVGMKLEA 574
>gi|315248867|gb|ADT91626.1| transcription factor betaFTZ-F1 [Spodoptera litura]
Length = 552
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/81 (91%), Positives = 78/81 (96%)
Query: 118 EHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
+ DTK+ IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER+CHIDKT
Sbjct: 78 DQTDTKDVIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERACHIDKT 137
Query: 178 QRKRCPFCRFQKCLEVGMKLE 198
QRKRCPFCRFQKCL+VGMKLE
Sbjct: 138 QRKRCPFCRFQKCLDVGMKLE 158
>gi|24666434|ref|NP_524143.2| ftz transcription factor 1, isoform B [Drosophila melanogaster]
gi|45644987|sp|P33244.2|FTZF1_DROME RecName: Full=Nuclear hormone receptor FTZ-F1; AltName: Full=FTZ-F1
alpha; AltName: Full=Nuclear receptor subfamily 5 group
A member 3
gi|23093168|gb|AAF49231.2| ftz transcription factor 1, isoform B [Drosophila melanogaster]
gi|221307746|gb|ACM16732.1| LD15303p [Drosophila melanogaster]
Length = 1027
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 79/90 (87%), Gaps = 4/90 (4%)
Query: 114 AATPEHP----DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
+ATP H D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE
Sbjct: 488 SATPGHGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 547
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
RSCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 548 RSCHIDKTQRKRCPYCRFQKCLEVGMKLEA 577
>gi|195440416|ref|XP_002068038.1| GK10750 [Drosophila willistoni]
gi|194164123|gb|EDW79024.1| GK10750 [Drosophila willistoni]
Length = 810
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/84 (89%), Positives = 77/84 (91%)
Query: 115 ATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHI 174
A+ E D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHI
Sbjct: 262 ASGEAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHI 321
Query: 175 DKTQRKRCPFCRFQKCLEVGMKLE 198
DKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 322 DKTQRKRCPYCRFQKCLEVGMKLE 345
>gi|383853385|ref|XP_003702203.1| PREDICTED: nuclear hormone receptor FTZ-F1-like [Megachile
rotundata]
Length = 684
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/89 (86%), Positives = 81/89 (91%), Gaps = 1/89 (1%)
Query: 112 TIAATPEHPDTKE-GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 170
+I + PDTK+ IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER
Sbjct: 155 SIPCPSDFPDTKDIVIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 214
Query: 171 SCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
SCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 215 SCHIDKTQRKRCPYCRFQKCLEVGMKLEA 243
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKG 152
+EE CP+CGDK+SGY YGLLT + G
Sbjct: 96 ALEERCPMCGDKMSGYQYGLLTSATVSG 123
>gi|195022948|ref|XP_001985668.1| GH17194 [Drosophila grimshawi]
gi|193899150|gb|EDV98016.1| GH17194 [Drosophila grimshawi]
Length = 965
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/88 (85%), Positives = 78/88 (88%)
Query: 111 STIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 170
S + + E D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER
Sbjct: 433 SATSGSGEAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 492
Query: 171 SCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
SCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 493 SCHIDKTQRKRCPYCRFQKCLEVGMKLE 520
>gi|157458|gb|AAA28542.1| FTZ-F1 [Drosophila melanogaster]
Length = 1043
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 79/90 (87%), Gaps = 4/90 (4%)
Query: 114 AATPEHP----DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
+ATP H D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE
Sbjct: 490 SATPGHGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 549
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
RSCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 550 RSCHIDKTQRKRCPYCRFQKCLEVGMKLEA 579
>gi|195352228|ref|XP_002042616.1| GM14921 [Drosophila sechellia]
gi|194124500|gb|EDW46543.1| GM14921 [Drosophila sechellia]
Length = 974
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 79/90 (87%), Gaps = 4/90 (4%)
Query: 114 AATPEHP----DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
+ATP H D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE
Sbjct: 484 SATPGHGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 543
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
RSCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 544 RSCHIDKTQRKRCPYCRFQKCLEVGMKLEA 573
>gi|24666438|ref|NP_730359.1| ftz transcription factor 1, isoform A [Drosophila melanogaster]
gi|386771387|ref|NP_001246824.1| ftz transcription factor 1, isoform C [Drosophila melanogaster]
gi|23093169|gb|AAN11667.1| ftz transcription factor 1, isoform A [Drosophila melanogaster]
gi|383291999|gb|AFH04495.1| ftz transcription factor 1, isoform C [Drosophila melanogaster]
Length = 803
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 79/90 (87%), Gaps = 4/90 (4%)
Query: 114 AATPEHP----DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
+ATP H D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE
Sbjct: 264 SATPGHGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 323
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
RSCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 324 RSCHIDKTQRKRCPYCRFQKCLEVGMKLEA 353
>gi|194751787|ref|XP_001958205.1| GF10806 [Drosophila ananassae]
gi|190625487|gb|EDV41011.1| GF10806 [Drosophila ananassae]
Length = 1012
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/90 (84%), Positives = 78/90 (86%), Gaps = 4/90 (4%)
Query: 114 AATPEHP----DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
+A P H D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE
Sbjct: 468 SAAPGHAGDVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 527
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
RSCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 528 RSCHIDKTQRKRCPYCRFQKCLEVGMKLEA 557
>gi|195160888|ref|XP_002021304.1| GL25259 [Drosophila persimilis]
gi|194118417|gb|EDW40460.1| GL25259 [Drosophila persimilis]
Length = 950
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/79 (92%), Positives = 74/79 (93%)
Query: 121 DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK 180
D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK
Sbjct: 414 DFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK 473
Query: 181 RCPFCRFQKCLEVGMKLEV 199
RCP+CRFQKCLEVGMKLE
Sbjct: 474 RCPYCRFQKCLEVGMKLEA 492
>gi|195378520|ref|XP_002048031.1| GJ13743 [Drosophila virilis]
gi|194155189|gb|EDW70373.1| GJ13743 [Drosophila virilis]
Length = 1022
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/81 (91%), Positives = 75/81 (92%)
Query: 118 EHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
E D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT
Sbjct: 479 EAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 538
Query: 178 QRKRCPFCRFQKCLEVGMKLE 198
QRKRCP+CRFQKCLEVGMKLE
Sbjct: 539 QRKRCPYCRFQKCLEVGMKLE 559
>gi|350406354|ref|XP_003487743.1| PREDICTED: nuclear hormone receptor FTZ-F1-like [Bombus impatiens]
Length = 607
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/91 (84%), Positives = 82/91 (90%), Gaps = 1/91 (1%)
Query: 110 TSTIAATPEHPDTKEGI-EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA 168
T +I E PDTK+ I EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA
Sbjct: 149 TGSIPCPSEFPDTKDIIIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA 208
Query: 169 ERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
ER+CHIDKTQRKRCP+CRFQKCL+VGMKLE
Sbjct: 209 ERTCHIDKTQRKRCPYCRFQKCLDVGMKLEA 239
>gi|158294557|ref|XP_556310.2| AGAP005661-PA [Anopheles gambiae str. PEST]
gi|157015618|gb|EAL39882.2| AGAP005661-PA [Anopheles gambiae str. PEST]
Length = 1099
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/81 (90%), Positives = 75/81 (92%)
Query: 118 EHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
+ D K IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER CHIDKT
Sbjct: 577 DQTDLKYFIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERQCHIDKT 636
Query: 178 QRKRCPFCRFQKCLEVGMKLE 198
QRKRCP+CRFQKCLEVGMKLE
Sbjct: 637 QRKRCPYCRFQKCLEVGMKLE 657
>gi|304811|gb|AAA28915.1| steroid receptor beta FTZ-F1 [Drosophila melanogaster]
Length = 816
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 79/90 (87%), Gaps = 4/90 (4%)
Query: 114 AATPEHP----DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
+ATP H D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE
Sbjct: 263 SATPGHGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 322
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
RSCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 323 RSCHIDKTQRKRCPYCRFQKCLEVGMKLEA 352
>gi|8980871|gb|AAF82307.1|AF274870_1 nuclear receptor FTZ-F1 protein [Aedes aegypti]
Length = 840
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/133 (62%), Positives = 94/133 (70%), Gaps = 7/133 (5%)
Query: 67 ASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATP-EHPDTKEG 125
A GY+ N S P G+T ++ +S + + ++A + D K
Sbjct: 279 AEGSDGGYHDNISQTQSNYLAIPPSGTTAIEPTSLN------NLNVVSAIQCDQTDFKYF 332
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER CHIDKTQRKRCP+C
Sbjct: 333 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERQCHIDKTQRKRCPYC 392
Query: 186 RFQKCLEVGMKLE 198
RFQKCLEVGMKLE
Sbjct: 393 RFQKCLEVGMKLE 405
>gi|158294559|ref|XP_315680.4| AGAP005661-PB [Anopheles gambiae str. PEST]
gi|157015619|gb|EAA11812.4| AGAP005661-PB [Anopheles gambiae str. PEST]
Length = 715
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 73/81 (90%), Positives = 75/81 (92%)
Query: 118 EHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
+ D K IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER CHIDKT
Sbjct: 193 DQTDLKYFIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERQCHIDKT 252
Query: 178 QRKRCPFCRFQKCLEVGMKLE 198
QRKRCP+CRFQKCLEVGMKLE
Sbjct: 253 QRKRCPYCRFQKCLEVGMKLE 273
>gi|170043820|ref|XP_001849569.1| nuclear hormone receptor ftz-f1 [Culex quinquefasciatus]
gi|167867121|gb|EDS30504.1| nuclear hormone receptor ftz-f1 [Culex quinquefasciatus]
Length = 363
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/83 (90%), Positives = 76/83 (91%), Gaps = 1/83 (1%)
Query: 117 PEH-PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHID 175
P H D K IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER CHID
Sbjct: 261 PRHQTDFKYFIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERQCHID 320
Query: 176 KTQRKRCPFCRFQKCLEVGMKLE 198
KTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 321 KTQRKRCPYCRFQKCLEVGMKLE 343
>gi|403182466|gb|EJY57405.1| AAEL002062-PB, partial [Aedes aegypti]
Length = 559
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/132 (65%), Positives = 97/132 (73%), Gaps = 9/132 (6%)
Query: 68 SAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATP-EHPDTKEGI 126
SAGG N + N YL P G+T ++ +S + + ++A + D K I
Sbjct: 1 SAGGYHDNISQTQSN-YL-AIPPSGTTAIEPTSLN------NLNVVSAIQCDQTDFKYFI 52
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER CHIDKTQRKRCP+CR
Sbjct: 53 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERQCHIDKTQRKRCPYCR 112
Query: 187 FQKCLEVGMKLE 198
FQKCLEVGMKLE
Sbjct: 113 FQKCLEVGMKLE 124
>gi|195129727|ref|XP_002009306.1| GI13962 [Drosophila mojavensis]
gi|193920915|gb|EDW19782.1| GI13962 [Drosophila mojavensis]
Length = 757
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 74/81 (91%), Positives = 75/81 (92%)
Query: 118 EHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
E D K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT
Sbjct: 232 EAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 291
Query: 178 QRKRCPFCRFQKCLEVGMKLE 198
QRKRCP+CRFQKCLEVGMKLE
Sbjct: 292 QRKRCPYCRFQKCLEVGMKLE 312
>gi|380022277|ref|XP_003694977.1| PREDICTED: uncharacterized protein LOC100868657, partial [Apis
florea]
Length = 426
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 78/88 (88%), Positives = 81/88 (92%), Gaps = 1/88 (1%)
Query: 112 TIAATPEHPDTKEGI-EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 170
+I E PDTK+ I EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER
Sbjct: 339 SIPCPSEFPDTKDIIIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 398
Query: 171 SCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
SCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 399 SCHIDKTQRKRCPYCRFQKCLEVGMKLE 426
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 37/46 (80%), Gaps = 3/46 (6%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRT---VQNKKVYTCV 167
+EE CP+CGDK+SGY YGLLTCESCKGFFKR +KKVYTC+
Sbjct: 105 ALEERCPMCGDKMSGYQYGLLTCESCKGFFKRNNSPCSSKKVYTCL 150
>gi|405972025|gb|EKC36822.1| Nuclear receptor subfamily 5 group A member 2 [Crassostrea gigas]
Length = 540
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/84 (82%), Positives = 73/84 (86%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
PD K EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY+CV R+CHIDK+QR
Sbjct: 55 PDVKYAFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYSCVDNRNCHIDKSQR 114
Query: 180 KRCPFCRFQKCLEVGMKLEVSSQS 203
KRCP+CRFQKCL VGMKLE Q
Sbjct: 115 KRCPYCRFQKCLSVGMKLEAVRQD 138
>gi|443694950|gb|ELT95968.1| hypothetical protein CAPTEDRAFT_186691 [Capitella teleta]
Length = 486
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/88 (81%), Positives = 75/88 (85%), Gaps = 1/88 (1%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
PD K GIEELCPVCGDKVSGYHYGL TCESCKGFFKRTVQNKKVY+CV R+C IDKTQR
Sbjct: 31 PDIKVGIEELCPVCGDKVSGYHYGLQTCESCKGFFKRTVQNKKVYSCVDNRNCMIDKTQR 90
Query: 180 KRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
KRCP+CRFQKCL VGMKLE V S G
Sbjct: 91 KRCPYCRFQKCLSVGMKLEAVRSDRMRG 118
>gi|390356378|ref|XP_003728766.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
isoform 1 [Strongylocentrotus purpuratus]
Length = 522
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 90/134 (67%), Gaps = 15/134 (11%)
Query: 74 YNFNNMVDNS-YLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATP--------EHPDTKE 124
YN + D++ YLF PG S + P T+ TP + D K
Sbjct: 22 YNMPMLPDHAEYLFPCPGPYSMD------EYGEIPLDTTCTLKTPALRMDFNFDQSDVKP 75
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
+EE CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTC+ R+C IDKTQRKRCP+
Sbjct: 76 ELEEPCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCIENRNCAIDKTQRKRCPY 135
Query: 185 CRFQKCLEVGMKLE 198
CRFQKCL+VGMKLE
Sbjct: 136 CRFQKCLKVGMKLE 149
>gi|72094401|ref|XP_791919.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
isoform 2 [Strongylocentrotus purpuratus]
Length = 487
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 66/78 (84%), Positives = 71/78 (91%)
Query: 121 DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK 180
D K +EE CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTC+ R+C IDKTQRK
Sbjct: 37 DVKPELEEPCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCIENRNCAIDKTQRK 96
Query: 181 RCPFCRFQKCLEVGMKLE 198
RCP+CRFQKCL+VGMKLE
Sbjct: 97 RCPYCRFQKCLKVGMKLE 114
>gi|259013275|ref|NP_001158442.1| FTZ-F1-related protein [Saccoglossus kowalevskii]
gi|197320551|gb|ACH68437.1| FTZ-F1-related protein [Saccoglossus kowalevskii]
Length = 475
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 73/81 (90%)
Query: 118 EHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
E+ + K +++CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTC+ R+C IDKT
Sbjct: 19 ENEELKVAFDDMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCIENRNCVIDKT 78
Query: 178 QRKRCPFCRFQKCLEVGMKLE 198
QRKRCP+CRFQKCL+VGMKLE
Sbjct: 79 QRKRCPYCRFQKCLKVGMKLE 99
>gi|327277808|ref|XP_003223655.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
[Anolis carolinensis]
Length = 855
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 393 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 452
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 453 YCRFQKCLSVGMKLE 467
>gi|291402684|ref|XP_002717722.1| PREDICTED: nuclear receptor subfamily 5, group A, member 2
[Oryctolagus cuniculus]
Length = 541
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|444717055|gb|ELW57891.1| Nuclear receptor subfamily 5 group A member 2 [Tupaia chinensis]
Length = 583
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 68/76 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLEV 199
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLEA 115
>gi|410986212|ref|XP_004001611.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor subfamily 5 group
A member 2 [Felis catus]
Length = 495
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 34 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 94 YCRFQKCLSVGMKLE 108
>gi|432092297|gb|ELK24919.1| Nuclear receptor subfamily 5 group A member 2 [Myotis davidii]
Length = 417
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 24 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 83
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 84 YCRFQKCLSVGMKLE 98
>gi|431921893|gb|ELK19096.1| Nuclear receptor subfamily 5 group A member 2 [Pteropus alecto]
Length = 329
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 68/76 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 8 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 67
Query: 184 FCRFQKCLEVGMKLEV 199
+CRFQKCL VGMKLE
Sbjct: 68 YCRFQKCLSVGMKLEA 83
>gi|395838915|ref|XP_003792351.1| PREDICTED: nuclear receptor subfamily 5 group A member 2 isoform 1
[Otolemur garnettii]
Length = 541
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|1947098|gb|AAD03155.1| alpha1-fetoprotein transcription factor [Homo sapiens]
Length = 500
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|4504343|ref|NP_003813.1| nuclear receptor subfamily 5 group A member 2 isoform 2 [Homo
sapiens]
gi|114571712|ref|XP_525014.2| PREDICTED: nuclear receptor subfamily 5 group A member 2 isoform 2
[Pan troglodytes]
gi|397505096|ref|XP_003823110.1| PREDICTED: nuclear receptor subfamily 5 group A member 2 isoform 2
[Pan paniscus]
gi|402857721|ref|XP_003893394.1| PREDICTED: nuclear receptor subfamily 5 group A member 2 isoform 2
[Papio anubis]
gi|426333172|ref|XP_004028158.1| PREDICTED: nuclear receptor subfamily 5 group A member 2 isoform 2
[Gorilla gorilla gorilla]
gi|5002242|gb|AAD37378.1|AF146343_1 CYP7A promoter binding factor [Homo sapiens]
gi|10441619|gb|AAG17124.1|AF190464_1 hepatocytic transcription factor B1F [Homo sapiens]
gi|3916048|gb|AAC78727.1| hepatocytic transcription factor [Homo sapiens]
gi|110002573|gb|AAI18653.1| Nuclear receptor subfamily 5, group A, member 2 [Homo sapiens]
gi|110002615|gb|AAI18572.1| Nuclear receptor subfamily 5, group A, member 2 [Homo sapiens]
gi|119611712|gb|EAW91306.1| nuclear receptor subfamily 5, group A, member 2, isoform CRA_b
[Homo sapiens]
gi|307685609|dbj|BAJ20735.1| nuclear receptor subfamily 5, group A, member 2 [synthetic
construct]
gi|325495525|gb|ADZ17368.1| liver nuclear receptor homolog-1 variant 2 [Homo sapiens]
Length = 495
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 34 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 94 YCRFQKCLSVGMKLE 108
>gi|355746061|gb|EHH50686.1| hypothetical protein EGM_01552 [Macaca fascicularis]
Length = 513
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 52 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 111
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 112 YCRFQKCLSVGMKLE 126
>gi|109018950|ref|XP_001110202.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
isoform 2 [Macaca mulatta]
Length = 495
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 34 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 94 YCRFQKCLSVGMKLE 108
>gi|3810967|dbj|BAA34092.1| FTZ-F1 related protein [Homo sapiens]
Length = 541
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|395838917|ref|XP_003792352.1| PREDICTED: nuclear receptor subfamily 5 group A member 2 isoform 2
[Otolemur garnettii]
Length = 495
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 34 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 94 YCRFQKCLSVGMKLE 108
>gi|296230345|ref|XP_002760663.1| PREDICTED: nuclear receptor subfamily 5 group A member 2 isoform 2
[Callithrix jacchus]
Length = 495
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 34 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 94 YCRFQKCLSVGMKLE 108
>gi|119611711|gb|EAW91305.1| nuclear receptor subfamily 5, group A, member 2, isoform CRA_a
[Homo sapiens]
Length = 358
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 68/76 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 34 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Query: 184 FCRFQKCLEVGMKLEV 199
+CRFQKCL VGMKLE
Sbjct: 94 YCRFQKCLSVGMKLEA 109
>gi|332205882|ref|NP_001193745.1| nuclear receptor subfamily 5 group A member 2 [Bos taurus]
gi|296478911|tpg|DAA21026.1| TPA: nuclear receptor subfamily 5, group A, member 2 isoform 1 [Bos
taurus]
Length = 541
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|355558912|gb|EHH15692.1| hypothetical protein EGK_01814 [Macaca mulatta]
Length = 540
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 79 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 138
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 139 YCRFQKCLSVGMKLE 153
>gi|332230768|ref|XP_003264567.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor subfamily 5 group
A member 2 [Nomascus leucogenys]
Length = 541
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|45545405|ref|NP_995582.1| nuclear receptor subfamily 5 group A member 2 isoform 1 [Homo
sapiens]
gi|114571710|ref|XP_001142695.1| PREDICTED: nuclear receptor subfamily 5 group A member 2 isoform 1
[Pan troglodytes]
gi|397505094|ref|XP_003823109.1| PREDICTED: nuclear receptor subfamily 5 group A member 2 isoform 1
[Pan paniscus]
gi|426333170|ref|XP_004028157.1| PREDICTED: nuclear receptor subfamily 5 group A member 2 isoform 1
[Gorilla gorilla gorilla]
gi|7676156|sp|O00482.2|NR5A2_HUMAN RecName: Full=Nuclear receptor subfamily 5 group A member 2;
AltName: Full=Alpha-1-fetoprotein transcription factor;
AltName: Full=B1-binding factor; Short=hB1F; AltName:
Full=CYP7A promoter-binding factor; AltName:
Full=Hepatocytic transcription factor; AltName:
Full=Liver receptor homolog 1; Short=LRH-1
gi|4590402|gb|AAD26565.1|AF124247_1 hepatocytic transcription factor hB1F-2 [Homo sapiens]
gi|10441620|gb|AAG17125.1|AF190464_2 hepatocytic transcription factor isoform B1F-2 [Homo sapiens]
gi|119611714|gb|EAW91308.1| nuclear receptor subfamily 5, group A, member 2, isoform CRA_d
[Homo sapiens]
Length = 541
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|126352552|ref|NP_001075264.1| nuclear receptor subfamily 5 group A member 2 [Equus caballus]
gi|11493783|gb|AAG35649.1|AF203913_1 steroidogenic factor 2 [Equus caballus]
Length = 495
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 34 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 94 YCRFQKCLSVGMKLE 108
>gi|389620951|gb|AFK93862.1| nuclear receptor subfamily 5 group A member 2 [Sus scrofa]
Length = 501
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|301757645|ref|XP_002914659.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
[Ailuropoda melanoleuca]
Length = 541
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|402857719|ref|XP_003893393.1| PREDICTED: nuclear receptor subfamily 5 group A member 2 isoform 1
[Papio anubis]
Length = 541
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|390477376|ref|XP_003735285.1| PREDICTED: nuclear receptor subfamily 5 group A member 2
[Callithrix jacchus]
Length = 501
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|345803057|ref|XP_547371.3| PREDICTED: nuclear receptor subfamily 5 group A member 2 [Canis
lupus familiaris]
Length = 469
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 8 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 67
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 68 YCRFQKCLSVGMKLE 82
>gi|380710166|gb|AFD98842.1| nuclear receptor subfamily 5 group A member 2 isoform 1 [Sus
scrofa]
Length = 495
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 34 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 94 YCRFQKCLSVGMKLE 108
>gi|296230343|ref|XP_002760662.1| PREDICTED: nuclear receptor subfamily 5 group A member 2 isoform 1
[Callithrix jacchus]
Length = 541
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|109018948|ref|XP_001110281.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
isoform 3 [Macaca mulatta]
Length = 541
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|400270832|gb|AFP75245.1| nuclear receptor subfamily 5 group A member 2 [Tupaia belangeri]
Length = 541
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|397505098|ref|XP_003823111.1| PREDICTED: nuclear receptor subfamily 5 group A member 2 isoform 3
[Pan paniscus]
Length = 501
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|403294672|ref|XP_003938293.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
isoform 2 [Saimiri boliviensis boliviensis]
Length = 495
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 34 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 94 YCRFQKCLSVGMKLE 108
>gi|326924950|ref|XP_003208685.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
[Meleagris gallopavo]
Length = 495
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 34 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 94 YCRFQKCLSVGMKLE 108
>gi|296478912|tpg|DAA21027.1| TPA: nuclear receptor subfamily 5, group A, member 2 isoform 2 [Bos
taurus]
Length = 495
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 34 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 94 YCRFQKCLSVGMKLE 108
>gi|216409746|dbj|BAH02310.1| nuclear receptor subfamily 5, group A [Homo sapiens]
Length = 501
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|350537337|ref|NP_001233209.1| nuclear receptor subfamily 5 group A member 2 [Ovis aries]
gi|339958758|gb|AEK25127.1| nuclear receptor subfamily 5 group A member 2 [Ovis aries]
gi|353025422|gb|AEQ61833.1| liver receptor-like protein [Ovis aries]
Length = 495
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 34 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 94 YCRFQKCLSVGMKLE 108
>gi|449507916|ref|XP_002193005.2| PREDICTED: nuclear receptor subfamily 5 group A member 2
[Taeniopygia guttata]
Length = 501
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|449268136|gb|EMC79006.1| Nuclear receptor subfamily 5 group A member 2 [Columba livia]
Length = 501
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|451172094|ref|NP_001263393.1| nuclear receptor subfamily 5 group A member 2 isoform 3 [Homo
sapiens]
gi|194385660|dbj|BAG65205.1| unnamed protein product [Homo sapiens]
gi|221040206|dbj|BAH14884.1| unnamed protein product [Homo sapiens]
Length = 469
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 8 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 67
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 68 YCRFQKCLSVGMKLE 82
>gi|344277228|ref|XP_003410405.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
[Loxodonta africana]
Length = 702
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 68/76 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 241 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 300
Query: 184 FCRFQKCLEVGMKLEV 199
+CRFQKCL VGMKLE
Sbjct: 301 YCRFQKCLSVGMKLEA 316
>gi|403294674|ref|XP_003938294.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
isoform 3 [Saimiri boliviensis boliviensis]
Length = 501
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|403294670|ref|XP_003938292.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
isoform 1 [Saimiri boliviensis boliviensis]
Length = 541
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|281351212|gb|EFB26796.1| hypothetical protein PANDA_002579 [Ailuropoda melanoleuca]
Length = 520
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 59 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 118
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 119 YCRFQKCLSVGMKLE 133
>gi|297281162|ref|XP_002802036.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
[Macaca mulatta]
Length = 469
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 8 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 67
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 68 YCRFQKCLSVGMKLE 82
>gi|45384182|ref|NP_990409.1| nuclear receptor subfamily 5 group A member 2 [Gallus gallus]
gi|3334187|sp|O42101.1|NR5A2_CHICK RecName: Full=Nuclear receptor subfamily 5 group A member 2;
AltName: Full=FTF/LRH-1; AltName: Full=OR2.0
gi|2541858|dbj|BAA22838.1| FTF/LRH-1 [Gallus gallus]
Length = 501
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|121483979|gb|ABM54305.1| NR5A2 [Pan paniscus]
gi|124111232|gb|ABM92007.1| NR5A2 [Pan troglodytes]
Length = 370
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 68/76 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLEV 199
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLEA 155
>gi|120974729|gb|ABM46722.1| NR5A2 [Gorilla gorilla]
Length = 370
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 68/76 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLEV 199
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLEA 155
>gi|440900736|gb|ELR51807.1| Nuclear receptor subfamily 5 group A member 2 [Bos grunniens mutus]
Length = 536
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 75 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 134
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 135 YCRFQKCLSVGMKLE 149
>gi|334321860|ref|XP_001377433.2| PREDICTED: nuclear receptor subfamily 5 group A member 2
[Monodelphis domestica]
Length = 542
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|395531065|ref|XP_003767603.1| PREDICTED: nuclear receptor subfamily 5 group A member 2
[Sarcophilus harrisii]
Length = 502
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|58331857|ref|NP_001011100.1| nuclear receptor subfamily 5, group A, member 2 [Xenopus (Silurana)
tropicalis]
gi|54038250|gb|AAH84495.1| nuclear receptor subfamily 5, group A, member 2 [Xenopus (Silurana)
tropicalis]
Length = 501
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EE+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 40 EELEEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|357575248|gb|AET85183.1| nuclear receptor subfamily 5 group A member 2 [Cricetulus
barabensis]
Length = 541
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|345306365|ref|XP_001505652.2| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
[Ornithorhynchus anatinus]
Length = 659
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 198 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 257
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 258 YCRFQKCLSVGMKLE 272
>gi|357575250|gb|AET85184.1| nuclear receptor subfamily 5 group A member 2 variant 2 [Cricetulus
barabensis]
Length = 501
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|351709342|gb|EHB12261.1| Nuclear receptor subfamily 5 group A member 2 [Heterocephalus
glaber]
Length = 391
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 68/76 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLEV 199
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLEA 115
>gi|354501691|ref|XP_003512922.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like,
partial [Cricetulus griseus]
Length = 459
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>gi|14010847|ref|NP_109601.1| nuclear receptor subfamily 5 group A member 2 isoform 1 [Mus
musculus]
gi|7676159|sp|P45448.3|NR5A2_MOUSE RecName: Full=Nuclear receptor subfamily 5 group A member 2;
AltName: Full=Liver receptor homolog 1; Short=LRH-1
gi|198875|gb|AAA39447.1| liver receptor homologue [Mus musculus]
gi|223460988|gb|AAI37846.1| Nuclear receptor subfamily 5, group A, member 2 [Mus musculus]
Length = 560
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 70/75 (93%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN+K YTC+ ++C IDKTQRKRCP
Sbjct: 101 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCP 160
Query: 184 FCRFQKCLEVGMKLE 198
+CRF+KC++VGMKLE
Sbjct: 161 YCRFKKCIDVGMKLE 175
>gi|13492975|ref|NP_068510.1| nuclear receptor subfamily 5 group A member 2 [Rattus norvegicus]
gi|81907060|sp|Q9QWM1.1|NR5A2_RAT RecName: Full=Nuclear receptor subfamily 5 group A member 2;
AltName: Full=FTZ-F1 beta; AltName: Full=Liver receptor
homolog 1; Short=LRH-1
gi|4107117|dbj|BAA36339.1| FTZ-F1 beta1 [Rattus norvegicus]
Length = 560
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 70/75 (93%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN+K YTC+ ++C IDKTQRKRCP
Sbjct: 101 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCP 160
Query: 184 FCRFQKCLEVGMKLE 198
+CRF+KC++VGMKLE
Sbjct: 161 YCRFKKCIDVGMKLE 175
>gi|149980669|gb|ABR53725.1| liver receptor-like protein 1 [Monodelphis domestica]
Length = 345
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 68/76 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 53 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 112
Query: 184 FCRFQKCLEVGMKLEV 199
+CRFQKCL VGMKLE
Sbjct: 113 YCRFQKCLSVGMKLEA 128
>gi|157278393|ref|NP_001098298.1| LRH-1 [Oryzias latipes]
gi|74273322|gb|ABA01329.1| LRH-1 [Oryzias latipes]
Length = 523
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 40 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLTVGMKLE 114
>gi|149058494|gb|EDM09651.1| nuclear receptor subfamily 5, group A, member 2, isoform CRA_b
[Rattus norvegicus]
Length = 499
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 70/75 (93%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN+K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRF+KC++VGMKLE
Sbjct: 100 YCRFKKCIDVGMKLE 114
>gi|4107119|dbj|BAA36340.1| FTZ-F1 beta2 [Rattus norvegicus]
gi|149058495|gb|EDM09652.1| nuclear receptor subfamily 5, group A, member 2, isoform CRA_c
[Rattus norvegicus]
Length = 539
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 70/75 (93%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN+K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRF+KC++VGMKLE
Sbjct: 140 YCRFKKCIDVGMKLE 154
>gi|229335598|ref|NP_001153241.1| nuclear receptor subfamily 5 group A member 2 isoform 2 [Mus
musculus]
gi|74100341|gb|AAZ99450.1| liver receptor-like protein 1 variant 2 [Mus musculus]
Length = 499
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 70/75 (93%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN+K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRF+KC++VGMKLE
Sbjct: 100 YCRFKKCIDVGMKLE 114
>gi|351700859|gb|EHB03778.1| Nuclear receptor subfamily 5 group A member 2 [Heterocephalus
glaber]
Length = 410
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 34 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 94 YCRFQKCLSVGMKLE 108
>gi|218683821|gb|ACL00865.1| steroidogenic factor 1 [Kryptolebias marmoratus]
Length = 524
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 40 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLTVGMKLE 114
>gi|410921720|ref|XP_003974331.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
isoform 2 [Takifugu rubripes]
Length = 525
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 40 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLTVGMKLE 114
>gi|45686253|gb|AAS75791.1| FTZ-F1 [Acanthopagrus schlegelii]
Length = 520
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 40 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLTVGMKLE 114
>gi|410921718|ref|XP_003974330.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
isoform 1 [Takifugu rubripes]
Length = 525
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 40 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLTVGMKLE 114
>gi|348523091|ref|XP_003449057.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
[Oreochromis niloticus]
Length = 521
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 40 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLTVGMKLE 114
>gi|86620853|gb|AAP84609.2| steroidogenic factor 1 [Odontesthes bonariensis]
Length = 503
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 19 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 78
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 79 YCRFQKCLTVGMKLE 93
>gi|94959279|gb|ABF47516.1| steroidogenic factor 1 [Odontesthes hatcheri]
Length = 492
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 8 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 67
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 68 YCRFQKCLTVGMKLE 82
>gi|194592436|gb|ACF76563.1| LRH-1 [Tachysurus fulvidraco]
Length = 500
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 34 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 93
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 94 YCRFQKCLNVGMKLE 108
>gi|348577961|ref|XP_003474752.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
[Cavia porcellus]
Length = 863
Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 402 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 461
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 462 YCRFQKCLSVGMKLE 476
>gi|15145791|gb|AAK54449.1| nuclear receptor FF1aE [Danio rerio]
gi|190340123|gb|AAI63522.1| Nr5a2 protein [Danio rerio]
Length = 517
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 40 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLTVGMKLE 114
>gi|148707596|gb|EDL39543.1| nuclear receptor subfamily 5, group A, member 2 [Mus musculus]
Length = 451
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 70/75 (93%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN+K YTC+ ++C IDKTQRKRCP
Sbjct: 101 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCP 160
Query: 184 FCRFQKCLEVGMKLE 198
+CRF+KC++VGMKLE
Sbjct: 161 YCRFKKCIDVGMKLE 175
>gi|24158439|ref|NP_571538.1| nuclear receptor subfamily 5 group A member 2 [Danio rerio]
gi|2429328|gb|AAC60274.1| FTZ-F1 homolog [Danio rerio]
Length = 516
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 40 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLTVGMKLE 114
>gi|451663|gb|AAA18357.1| Ftz-F1-related orphan receptor B, partial [Xenopus laevis]
Length = 468
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ +EE+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 7 DELEEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 67 YCRFQKCLSVGMKLE 81
>gi|148229587|ref|NP_001081185.1| nuclear receptor subfamily 5, group A, member 2 [Xenopus laevis]
gi|451661|gb|AAA18356.1| Ftz-F1-related orphan receptor A [Xenopus laevis]
Length = 501
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 40 DELEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCPIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|213626636|gb|AAI69770.1| Xff1rashort protein [Xenopus laevis]
Length = 501
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 40 DELEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCPIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|213623458|gb|AAI69772.1| FTZ-F1-related nuclear orphan receptor variant [Xenopus laevis]
Length = 501
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 40 DELEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCPIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|7416831|dbj|BAA94077.1| FTZ-F1 alpha [Glandirana rugosa]
Length = 501
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ +EE+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 DDLEEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQTCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|27803710|gb|AAO21918.1| nuclear receptor subfamily 5 group A member 2 [Oryctolagus
cuniculus]
Length = 173
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 68/76 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 10 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 69
Query: 184 FCRFQKCLEVGMKLEV 199
+CRFQKCL +GMKLE
Sbjct: 70 YCRFQKCLSLGMKLEA 85
>gi|7416833|dbj|BAA94078.1| FTZ-F1 beta [Glandirana rugosa]
Length = 469
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ +EE+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 8 DDLEEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQTCQIDKTQRKRCP 67
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 68 YCRFQKCLSVGMKLE 82
>gi|47207712|emb|CAF92683.1| unnamed protein product [Tetraodon nigroviridis]
Length = 291
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 68/76 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 8 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 67
Query: 184 FCRFQKCLEVGMKLEV 199
+CRFQKCL VGMKLE
Sbjct: 68 YCRFQKCLTVGMKLEA 83
>gi|185132297|ref|NP_001117708.1| FTZ-F1 related protein [Oncorhynchus mykiss]
gi|84469418|dbj|BAE71417.1| FTZ-F1 related protein [Oncorhynchus mykiss]
Length = 512
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 40 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCAIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLTVGMKLE 114
>gi|727415|gb|AAA64285.1| FTZ-F1-related nuclear orphan receptor variant [Xenopus laevis]
Length = 333
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/74 (85%), Positives = 67/74 (90%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP+C
Sbjct: 42 LEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCPIDKTQRKRCPYC 101
Query: 186 RFQKCLEVGMKLEV 199
RFQKCL VGMKLE
Sbjct: 102 RFQKCLSVGMKLEA 115
>gi|2944393|gb|AAD03248.1| alpha1-fetoprotein transcription factor short variant [Homo
sapiens]
Length = 323
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/74 (83%), Positives = 67/74 (90%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP+C
Sbjct: 2 LEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYC 61
Query: 186 RFQKCLEVGMKLEV 199
RFQKCL VGMKLE
Sbjct: 62 RFQKCLSVGMKLEA 75
>gi|17223547|gb|AAG49005.1| fushi-tarazu factor 1-B [Clarias gariepinus]
Length = 479
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/77 (83%), Positives = 68/77 (88%)
Query: 122 TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
T+E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKR
Sbjct: 15 TEEDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCNQNQDCGIDKTQRKR 74
Query: 182 CPFCRFQKCLEVGMKLE 198
CPFCRFQKCL VGM+LE
Sbjct: 75 CPFCRFQKCLSVGMRLE 91
>gi|157278133|ref|NP_001098166.1| FTZ-F1 [Oryzias latipes]
gi|3426019|dbj|BAA32394.1| FTZ-F1 [Oryzias latipes]
Length = 486
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 66/75 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCP
Sbjct: 20 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAENQECKIDKTQRKRCP 79
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 80 FCRFQKCLNVGMRLE 94
>gi|76160806|gb|ABA39863.1| SF-1 [Oreochromis aureus]
Length = 486
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 66/75 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCP
Sbjct: 20 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAENQECKIDKTQRKRCP 79
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 80 FCRFQKCLNVGMRLE 94
>gi|194385626|dbj|BAG65188.1| unnamed protein product [Homo sapiens]
Length = 501
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCK FFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKEFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>gi|66356139|gb|AAY45704.1| nuclear receptor subfamily 5 group A member 1 [Ictalurus punctatus]
Length = 479
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/77 (83%), Positives = 68/77 (88%)
Query: 122 TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
T+E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKR
Sbjct: 15 TEEDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCNQNQDCGIDKTQRKR 74
Query: 182 CPFCRFQKCLEVGMKLE 198
CPFCRFQKCL VGM+LE
Sbjct: 75 CPFCRFQKCLSVGMRLE 91
>gi|371591341|gb|AEX55032.1| fushi tarazu factor 1 [Clarias gariepinus]
Length = 469
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/77 (83%), Positives = 68/77 (88%)
Query: 122 TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
T+E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKR
Sbjct: 5 TEEDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCNQNQDCGIDKTQRKR 64
Query: 182 CPFCRFQKCLEVGMKLE 198
CPFCRFQKCL VGM+LE
Sbjct: 65 CPFCRFQKCLSVGMRLE 81
>gi|17223545|gb|AAG49004.1| fushi tarazu factor 1-A [Clarias gariepinus]
Length = 469
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/77 (83%), Positives = 68/77 (88%)
Query: 122 TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
T+E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKR
Sbjct: 5 TEEDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCNQNQDCGIDKTQRKR 64
Query: 182 CPFCRFQKCLEVGMKLE 198
CPFCRFQKCL VGM+LE
Sbjct: 65 CPFCRFQKCLSVGMRLE 81
>gi|348535172|ref|XP_003455075.1| PREDICTED: nuclear receptor subfamily 5 group A member 2
[Oreochromis niloticus]
gi|30089291|dbj|BAC75890.1| SF-1/Ad4BP [Oreochromis niloticus]
Length = 486
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 66/75 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCP
Sbjct: 20 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAENQECKIDKTQRKRCP 79
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 80 FCRFQKCLNVGMRLE 94
>gi|1408464|gb|AAC52645.1| alpha1-fetoprotein transcription factor, partial [Rattus
norvegicus]
Length = 212
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 61/76 (80%), Positives = 70/76 (92%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN+K YTC+ ++C IDKTQRKRCP
Sbjct: 15 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCP 74
Query: 184 FCRFQKCLEVGMKLEV 199
+CRF+KC++VGMKLE
Sbjct: 75 YCRFKKCIDVGMKLEA 90
>gi|291565556|dbj|BAI87836.1| steroidogenic factor 1 [Glandirana rugosa]
Length = 468
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCTENQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGM+LE
Sbjct: 67 YCRFQKCLNVGMRLE 81
>gi|146447251|gb|ABQ41307.1| FTZ-F1 [Cynoglossus semilaevis]
Length = 485
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 66/75 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCP
Sbjct: 20 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKGYTCAENQECKIDKTQRKRCP 79
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 80 FCRFQKCLNVGMRLE 94
>gi|4126870|dbj|BAA36789.1| SF-1/Ad4BP [Glandirana rugosa]
Length = 468
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCTENQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGM+LE
Sbjct: 67 YCRFQKCLNVGMRLE 81
>gi|149047895|gb|EDM00511.1| rCG37716, isoform CRA_b [Rattus norvegicus]
Length = 432
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 84 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 143
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 144 FCRFQKCLTVGMRLEA 159
>gi|22023902|gb|AAM89250.1|AF526537_1 FTZ-F1 [Carassius auratus]
Length = 503
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/73 (84%), Positives = 65/73 (89%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCPFC
Sbjct: 9 LEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAESQDCKIDKTQRKRCPFC 68
Query: 186 RFQKCLEVGMKLE 198
RFQKCL VGM+LE
Sbjct: 69 RFQKCLNVGMRLE 81
>gi|334265438|gb|AEG75297.1| fushi tarazu factor-1 [Oreochromis niloticus]
Length = 486
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 66/75 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCP
Sbjct: 20 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAENQECIIDKTQRKRCP 79
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 80 FCRFQKCLNVGMRLE 94
>gi|224809509|ref|NP_001139213.1| nuclear receptor subfamily 5, group A, member 1 [Xenopus (Silurana)
tropicalis]
gi|223890060|dbj|BAH22851.1| steroidgenic factor 1 [Xenopus (Silurana) tropicalis]
Length = 468
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCTENQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGM+LE
Sbjct: 67 YCRFQKCLNVGMRLE 81
>gi|149047896|gb|EDM00512.1| rCG37716, isoform CRA_c [Rattus norvegicus]
Length = 539
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 84 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 143
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 144 FCRFQKCLTVGMRLEA 159
>gi|220401|dbj|BAA01441.1| embryonal LTR binding protein [Mus musculus domesticus]
Length = 465
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 84 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 143
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 144 FCRFQKCLTVGMRLEA 159
>gi|148694876|gb|EDL26823.1| nuclear receptor subfamily 5, group A, member 1, isoform CRA_a [Mus
musculus]
Length = 465
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 84 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 143
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 144 FCRFQKCLTVGMRLEA 159
>gi|157779744|gb|ABV71399.1| SF-1 [Cyprinus carpio]
Length = 503
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/73 (84%), Positives = 65/73 (89%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCPFC
Sbjct: 9 LEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAESQDCKIDKTQRKRCPFC 68
Query: 186 RFQKCLEVGMKLE 198
RFQKCL VGM+LE
Sbjct: 69 RFQKCLNVGMRLE 81
>gi|342360003|gb|AEL29574.1| FTZ-F1 [Monopterus albus]
Length = 486
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 66/75 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCP
Sbjct: 20 DDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAENQECKIDKTQRKRCP 79
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 80 FCRFQKCLSVGMRLE 94
>gi|185133850|ref|NP_001117650.1| tFZR1 [Oncorhynchus mykiss]
gi|2982698|dbj|BAA25269.1| tFZR1 [Oncorhynchus mykiss]
Length = 447
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 62/74 (83%), Positives = 65/74 (87%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCPFC
Sbjct: 9 LEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAENQDCKIDKTQRKRCPFC 68
Query: 186 RFQKCLEVGMKLEV 199
RFQKCL VGM+LE
Sbjct: 69 RFQKCLNVGMRLEA 82
>gi|444707258|gb|ELW48542.1| Steroidogenic factor 1 [Tupaia chinensis]
Length = 976
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/93 (72%), Positives = 71/93 (76%), Gaps = 7/93 (7%)
Query: 114 AATPEHPD-------TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTC 166
A P H D E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC
Sbjct: 535 ALLPPHADGAGMDYSYDEDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTC 594
Query: 167 VAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
+SC IDKTQRKRCPFCRFQKCL VGM+LE
Sbjct: 595 TESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEA 627
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 44/57 (77%)
Query: 139 GYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
G HYG+++CE CKGFFKR++ NK+VY C +++C + + QR RC +CR KCL++GM
Sbjct: 115 GLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGM 171
>gi|410932169|ref|XP_003979466.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like,
partial [Takifugu rubripes]
Length = 399
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 66/75 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCP
Sbjct: 20 DDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAENQECKIDKTQRKRCP 79
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 80 FCRFQKCLSVGMRLE 94
>gi|354499096|ref|XP_003511647.1| PREDICTED: steroidogenic factor 1 [Cricetulus griseus]
gi|344236727|gb|EGV92830.1| Steroidogenic factor 1 [Cricetulus griseus]
Length = 462
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|260802947|ref|XP_002596353.1| hypothetical protein BRAFLDRAFT_215489 [Branchiostoma floridae]
gi|229281608|gb|EEN52365.1| hypothetical protein BRAFLDRAFT_215489 [Branchiostoma floridae]
Length = 445
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 71/81 (87%)
Query: 118 EHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
++ + + +EE CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKT
Sbjct: 5 QYEEEPKDLEEACPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKQYTCIENQNCVIDKT 64
Query: 178 QRKRCPFCRFQKCLEVGMKLE 198
QRKRCP+CRFQKCL+VGMKLE
Sbjct: 65 QRKRCPYCRFQKCLQVGMKLE 85
>gi|1805353|dbj|BAA19127.1| ELP3 [Mus musculus]
Length = 463
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|20522231|ref|NP_620639.1| steroidogenic factor 1 [Mus musculus]
gi|341942103|sp|P33242.3|STF1_MOUSE RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1;
AltName: Full=Adrenal 4-binding protein; AltName:
Full=Embryonal LTR-binding protein; Short=ELP; AltName:
Full=Embryonal long terminal repeat-binding protein;
AltName: Full=Fushi tarazu factor homolog 1; AltName:
Full=Nuclear receptor subfamily 5 group A member 1;
AltName: Full=Steroid hormone receptor Ad4BP; AltName:
Full=Steroid hydroxylase positive regulator
gi|21217551|gb|AAM43952.1|AF511594_1 steroidogenic factor-1 [Mus musculus]
gi|425577|gb|AAB28338.1| steroidogenic factor 1 [Mus musculus]
gi|74141134|dbj|BAE22121.1| unnamed protein product [Mus musculus]
gi|74188443|dbj|BAE25855.1| unnamed protein product [Mus musculus]
gi|83405940|gb|AAI10477.1| Nuclear receptor subfamily 5, group A, member 1 [Mus musculus]
gi|83405942|gb|AAI10478.1| Nuclear receptor subfamily 5, group A, member 1 [Mus musculus]
Length = 462
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|74142710|dbj|BAE33893.1| unnamed protein product [Mus musculus]
gi|148694877|gb|EDL26824.1| nuclear receptor subfamily 5, group A, member 1, isoform CRA_b [Mus
musculus]
Length = 462
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|115529250|ref|NP_001070160.1| steroidogenic factor 1 [Taeniopygia guttata]
gi|15426034|gb|AAK97659.1|AF407573_1 steroidogenic factor 1 [Taeniopygia guttata]
Length = 466
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGM+LE
Sbjct: 67 YCRFQKCLTVGMRLE 81
>gi|300797824|ref|NP_001178028.1| steroidogenic factor 1 [Rattus norvegicus]
gi|1703164|sp|P50569.1|STF1_RAT RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1;
AltName: Full=Adrenal 4-binding protein; AltName:
Full=Fushi tarazu factor homolog 1; AltName:
Full=Nuclear receptor subfamily 5 group A member 1;
AltName: Full=Steroid hormone receptor Ad4BP
gi|1449196|dbj|BAA07722.1| Ad4BP [Rattus norvegicus]
gi|149047894|gb|EDM00510.1| rCG37716, isoform CRA_a [Rattus norvegicus]
Length = 462
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|27806027|ref|NP_776828.1| steroidogenic factor 1 [Bos taurus]
gi|416584|sp|Q04752.1|STF1_BOVIN RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1;
AltName: Full=Adrenal 4-binding protein; AltName:
Full=Fushi tarazu factor homolog 1; AltName:
Full=Nuclear receptor subfamily 5 group A member 1;
AltName: Full=Steroid hormone receptor Ad4BP
gi|217432|dbj|BAA02764.1| Ad4BP [Bos taurus]
gi|296482164|tpg|DAA24279.1| TPA: steroidogenic factor 1 [Bos taurus]
Length = 461
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|185133486|ref|NP_001118009.1| fushi tarazu factor 1 [Oncorhynchus mykiss]
gi|58983110|gb|AAW83490.1| fushi tarazu factor 1 [Oncorhynchus mykiss]
Length = 487
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 62/73 (84%), Positives = 65/73 (89%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCPFC
Sbjct: 22 LEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAENQECKIDKTQRKRCPFC 81
Query: 186 RFQKCLEVGMKLE 198
RFQKCL VGM+LE
Sbjct: 82 RFQKCLNVGMRLE 94
>gi|47086369|ref|NP_997999.1| nuclear receptor subfamily 5, group A, member 1b [Danio rerio]
gi|28916416|gb|AAO59489.1| Ff1d [Danio rerio]
gi|33468585|emb|CAE30391.1| novel protein similar to Carassius auratus nuclear hormone receptor
FTZ-F1 [Danio rerio]
gi|190336813|gb|AAI62260.1| Nuclear receptor subfamily 5, group A, member 1b [Danio rerio]
gi|190339356|gb|AAI62252.1| Nuclear receptor subfamily 5, group A, member 1b [Danio rerio]
Length = 502
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 65/73 (89%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+EE+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCPFC
Sbjct: 9 LEEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAESQDCKIDKTQRKRCPFC 68
Query: 186 RFQKCLEVGMKLE 198
RFQKCL VGM+LE
Sbjct: 69 RFQKCLNVGMRLE 81
>gi|351702108|gb|EHB05027.1| Steroidogenic factor 1 [Heterocephalus glaber]
Length = 461
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|440908258|gb|ELR58301.1| Steroidogenic factor 1 [Bos grunniens mutus]
Length = 461
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|413914793|gb|AFW21375.1| steroidogenic factor 1 [Bubalus bubalis]
Length = 461
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|397473205|ref|XP_003808108.1| PREDICTED: steroidogenic factor 1 isoform 2 [Pan paniscus]
Length = 539
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 85 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 144
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 145 FCRFQKCLTVGMRLEA 160
>gi|297270159|ref|XP_002800023.1| PREDICTED: steroidogenic factor 1-like isoform 2 [Macaca mulatta]
Length = 538
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 84 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 143
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 144 FCRFQKCLTVGMRLEA 159
>gi|344271937|ref|XP_003407793.1| PREDICTED: steroidogenic factor 1-like [Loxodonta africana]
Length = 461
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|395824169|ref|XP_003785343.1| PREDICTED: steroidogenic factor 1 [Otolemur garnettii]
Length = 461
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|47214970|emb|CAG01304.1| unnamed protein product [Tetraodon nigroviridis]
Length = 510
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 66/75 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ +EE+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCP
Sbjct: 10 DDLEEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAENQECKIDKTQRKRCP 69
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 70 FCRFQKCLSVGMRLE 84
>gi|24119283|ref|NP_571869.1| nuclear receptor subfamily 5, group A, member 1a [Danio rerio]
gi|7243339|gb|AAF43283.1|AF198086_1 ff1b [Danio rerio]
Length = 454
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 66/76 (86%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCP
Sbjct: 7 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCTQNQDCGIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLSVGMRLEA 82
>gi|431898816|gb|ELK07186.1| Steroidogenic factor 1 [Pteropus alecto]
Length = 461
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|403299848|ref|XP_003940686.1| PREDICTED: steroidogenic factor 1 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403299850|ref|XP_003940687.1| PREDICTED: steroidogenic factor 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 461
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLEA 82
>gi|83284975|gb|ABC02085.1| nuclear receptor subfamily 5 group A member 1 splice variant b
[Ictalurus punctatus]
Length = 108
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 73/94 (77%)
Query: 122 TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
T+E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKR
Sbjct: 15 TEEDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCNQNQDCGIDKTQRKR 74
Query: 182 CPFCRFQKCLEVGMKLEVSSQSTHGVVVIWSPHS 215
CPFCRFQKCL VGM+LE H + + HS
Sbjct: 75 CPFCRFQKCLSVGMRLEGRRAEKHLLPRVCVTHS 108
>gi|160221327|sp|P79387.3|STF1_PIG RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1;
AltName: Full=Adrenal 4-binding protein; AltName:
Full=Fushi tarazu factor homolog 1; AltName:
Full=Nuclear receptor subfamily 5 group A member 1;
AltName: Full=Steroid hormone receptor Ad4BP
gi|123299967|dbj|BAF45331.1| nuclear receptor subfamily 5, group A, member 1 [Sus scrofa]
Length = 461
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|148224522|ref|NP_001091438.1| nuclear receptor subfamily 5, group A, member 1 [Xenopus laevis]
gi|139002550|dbj|BAF52036.1| steroidogenic factor 1 [Xenopus laevis]
Length = 468
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCTENQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGM+LE
Sbjct: 67 YCRFQKCLNVGMRLE 81
>gi|301769265|ref|XP_002920047.1| PREDICTED: steroidogenic factor 1-like [Ailuropoda melanoleuca]
gi|281350177|gb|EFB25761.1| hypothetical protein PANDA_008727 [Ailuropoda melanoleuca]
Length = 455
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|425578|gb|AAB28339.1| embryonal long terminal repeat-binding protein [Mus musculus]
Length = 331
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLEA 82
>gi|426363012|ref|XP_004048641.1| PREDICTED: steroidogenic factor 1 [Gorilla gorilla gorilla]
Length = 461
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLEA 82
>gi|384940122|gb|AFI33666.1| steroidogenic factor 1 [Macaca mulatta]
Length = 461
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLEA 82
>gi|109110256|ref|XP_001082881.1| PREDICTED: steroidogenic factor 1-like isoform 1 [Macaca mulatta]
Length = 461
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLEA 82
>gi|332229985|ref|XP_003264167.1| PREDICTED: steroidogenic factor 1 [Nomascus leucogenys]
gi|397473203|ref|XP_003808107.1| PREDICTED: steroidogenic factor 1 isoform 1 [Pan paniscus]
Length = 461
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLEA 82
>gi|297685326|ref|XP_002820243.1| PREDICTED: steroidogenic factor 1 isoform 1 [Pongo abelii]
gi|395740947|ref|XP_003777496.1| PREDICTED: steroidogenic factor 1 isoform 2 [Pongo abelii]
Length = 461
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLEA 82
>gi|20070193|ref|NP_004950.2| steroidogenic factor 1 [Homo sapiens]
gi|3121738|sp|Q13285.2|STF1_HUMAN RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1;
AltName: Full=Adrenal 4-binding protein; AltName:
Full=Fushi tarazu factor homolog 1; AltName:
Full=Nuclear receptor subfamily 5 group A member 1;
AltName: Full=Steroid hormone receptor Ad4BP
gi|2052388|gb|AAB53105.1| steroidogenic factor 1 [Homo sapiens]
gi|21618439|gb|AAH32501.1| Nuclear receptor subfamily 5, group A, member 1 [Homo sapiens]
gi|119607997|gb|EAW87591.1| nuclear receptor subfamily 5, group A, member 1 [Homo sapiens]
gi|167773139|gb|ABZ92004.1| nuclear receptor subfamily 5, group A, member 1 [synthetic
construct]
gi|208966890|dbj|BAG73459.1| nuclear receptor subfamily 5, group A, member 1 [synthetic
construct]
gi|325463267|gb|ADZ15404.1| nuclear receptor subfamily 5, group A, member 1 [synthetic
construct]
gi|325495523|gb|ADZ17367.1| steroidogenic factor 1 nuclear receptor [Homo sapiens]
Length = 461
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLEA 82
>gi|216409744|dbj|BAH02309.1| steroidogenic factor-1 [Homo sapiens]
Length = 461
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLEA 82
>gi|325495571|gb|ADZ17391.1| steroidogenic factor 1 nuclear receptor [Homo sapiens]
Length = 421
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLEA 82
>gi|44355486|gb|AAS47030.1| steroidogenic factor 1 [Pleurodeles waltl]
Length = 468
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC ++C IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCTENQTCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGM+LE
Sbjct: 67 YCRFQKCLTVGMRLE 81
>gi|296190799|ref|XP_002743341.1| PREDICTED: steroidogenic factor 1 [Callithrix jacchus]
Length = 490
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLEA 82
>gi|83753936|pdb|2A66|A Chain A, Human Liver Receptor Homologue Dna-Binding Domain (Hlrh-1
Dbd) In Complex With Dsdna From The Hcyp7a1 Promoter
Length = 113
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 6 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 65
Query: 184 FCRFQKCLEVGMKLE-VSSQSTHGVVVIWSP 213
+CRFQKCL VGMKLE V + G + P
Sbjct: 66 YCRFQKCLSVGMKLEAVRADRMRGGRNKFGP 96
>gi|45686255|gb|AAS75792.1| FTZ-F1 [Acanthopagrus schlegelii]
Length = 464
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 66/75 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ +EELCPVCGDKVSGYHYGLLTCESCKGFF+RTVQN K YTC + C IDKTQRKRCP
Sbjct: 20 DDLEELCPVCGDKVSGYHYGLLTCESCKGFFQRTVQNNKRYTCAENQECKIDKTQRKRCP 79
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 80 FCRFQKCLSVGMRLE 94
>gi|432889046|ref|XP_004075118.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
[Oryzias latipes]
Length = 453
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 66/73 (90%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K+Y CV ++ C IDK QRKRCPFC
Sbjct: 9 LEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKIYACVDKQQCRIDKAQRKRCPFC 68
Query: 186 RFQKCLEVGMKLE 198
RFQKCL VGM++E
Sbjct: 69 RFQKCLHVGMRIE 81
>gi|47523442|ref|NP_999344.1| steroidogenic factor 1 [Sus scrofa]
gi|3757499|gb|AAC64209.1| steroidogenic factor-1 SF-1 [Sus scrofa]
Length = 461
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCE+CKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCETCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|115334528|dbj|BAF33254.1| Ad4BP [Coturnix japonica]
Length = 466
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC ++C IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQNCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGM+LE
Sbjct: 67 YCRFQKCLTVGMRLE 81
>gi|4586618|dbj|BAA76713.1| SF-1/Ad4BP [Gallus gallus]
Length = 466
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC ++C IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQNCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGM+LE
Sbjct: 67 YCRFQKCLTVGMRLE 81
>gi|168479587|dbj|BAG11546.1| Ad4BP [Eublepharis macularius]
Length = 468
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC ++C IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNSKHYTCTETQNCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGM+LE
Sbjct: 67 YCRFQKCLTVGMRLE 81
>gi|34484276|gb|AAQ72771.1| FTZ-F1 [Epinephelus coioides]
Length = 468
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/74 (82%), Positives = 65/74 (87%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G+EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K Y C ++ C ID TQRKRCPF
Sbjct: 8 GLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKKYICAEKQDCRIDITQRKRCPF 67
Query: 185 CRFQKCLEVGMKLE 198
CRFQKCL VGM+LE
Sbjct: 68 CRFQKCLHVGMRLE 81
>gi|2077920|dbj|BAA13546.1| AdBP4 [Homo sapiens]
Length = 461
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 66/76 (86%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQR RCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRNRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLEA 82
>gi|126352395|ref|NP_001075320.1| steroidogenic factor 1 [Equus caballus]
gi|49036495|sp|Q9GKL2.1|STF1_HORSE RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1;
AltName: Full=Nuclear receptor subfamily 5 group A
member 1
gi|11493781|gb|AAG35648.1|AF203911_1 steroidogenic factor 1 [Equus caballus]
Length = 461
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 66/75 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKT RKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTLRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|10945629|gb|AAG24622.1| steroidogenic factor 1 [Ovis aries]
Length = 443
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/73 (84%), Positives = 65/73 (89%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCPFCR
Sbjct: 1 DELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCR 60
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM+LE
Sbjct: 61 FQKCLTVGMRLEA 73
>gi|392284148|gb|AFM54605.1| FTZ-F1 [Sebastes schlegelii]
Length = 482
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 65/75 (86%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ +E LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCP
Sbjct: 20 DDLEGLCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAENQECKIDKTQRKRCP 79
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 80 FCRFQKCLNVGMRLE 94
>gi|49036491|sp|Q95L87.1|STF1_MACEU RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1;
AltName: Full=Nuclear receptor subfamily 5 group A
member 1
gi|15290639|gb|AAK94918.1|AF401742_1 steroidogenic factor 1 [Macropus eugenii]
Length = 463
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/76 (80%), Positives = 67/76 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC ++C IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQNCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
+CRFQKCL VGM+LE
Sbjct: 67 YCRFQKCLTVGMRLEA 82
>gi|395505691|ref|XP_003757173.1| PREDICTED: steroidogenic factor 1 [Sarcophilus harrisii]
Length = 390
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC ++C IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQNCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGM+LE
Sbjct: 67 YCRFQKCLTVGMRLE 81
>gi|334311611|ref|XP_001371703.2| PREDICTED: steroidogenic factor 1-like [Monodelphis domestica]
Length = 443
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC ++C IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQNCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGM+LE
Sbjct: 67 YCRFQKCLTVGMRLE 81
>gi|11527549|dbj|BAB18653.1| Ad4BP/SF-1 [Rattus norvegicus]
gi|44894133|gb|AAS48621.1| nuclear receptor AdBP4 [Homo sapiens]
Length = 81
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|45384188|ref|NP_990408.1| steroidogenic factor 1 [Gallus gallus]
gi|2541860|dbj|BAA22839.1| SF-1/Ad4BP [Gallus gallus]
Length = 466
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 66/75 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC ++C IDKTQRK CP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQNCKIDKTQRKCCP 66
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGM+LE
Sbjct: 67 YCRFQKCLTVGMRLE 81
>gi|99032236|pdb|2FF0|A Chain A, Solution Structure Of Steroidogenic Factor 1 Dna Binding
Domain Bound To Its Target Sequence In The Inhibin
Alpha- Subunit Promoter
Length = 102
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/73 (84%), Positives = 65/73 (89%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCPFCR
Sbjct: 1 DELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCR 60
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM+LE
Sbjct: 61 FQKCLTVGMRLEA 73
>gi|71987238|ref|NP_001024550.1| Protein NHR-25, isoform a [Caenorhabditis elegans]
gi|17380140|sp|Q19345.1|NHR25_CAEEL RecName: Full=Nuclear hormone receptor family member nhr-25
gi|3875724|emb|CAA91028.1| Protein NHR-25, isoform a [Caenorhabditis elegans]
Length = 572
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E+CPVCGD+VSGYHYGLLTCESCKGFFKRTVQNKK Y C AE +CH+D+T RKRCP CRF
Sbjct: 16 EMCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKQYQCSAEANCHVDRTCRKRCPSCRF 75
Query: 188 QKCLEVGMKLE 198
QKCL +GMK+E
Sbjct: 76 QKCLTMGMKME 86
>gi|341890851|gb|EGT46786.1| CBN-NHR-25 protein [Caenorhabditis brenneri]
Length = 542
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E+CPVCGD+VSGYHYGLLTCESCKGFFKRTVQNKK Y C AE +CH+D+T RKRCP CRF
Sbjct: 16 EMCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKQYQCSAESNCHVDRTCRKRCPSCRF 75
Query: 188 QKCLEVGMKLE 198
QKCL +GMK+E
Sbjct: 76 QKCLTMGMKME 86
>gi|7677116|gb|AAF67038.1|AF179214_1 NHR-25 alpha [Caenorhabditis elegans]
Length = 568
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E+CPVCGD+VSGYHYGLLTCESCKGFFKRTVQNKK Y C AE +CH+D+T RKRCP CRF
Sbjct: 12 EMCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKQYQCSAEANCHVDRTCRKRCPSCRF 71
Query: 188 QKCLEVGMKLE 198
QKCL +GMK+E
Sbjct: 72 QKCLTMGMKME 82
>gi|308475174|ref|XP_003099806.1| CRE-NHR-25 protein [Caenorhabditis remanei]
gi|308266278|gb|EFP10231.1| CRE-NHR-25 protein [Caenorhabditis remanei]
Length = 568
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 56/71 (78%), Positives = 64/71 (90%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E+CPVCGD+VSGYHYGLLTCESCKGFFKRTVQNKK Y C A+ +CH+D+T RKRCP CRF
Sbjct: 16 EMCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKQYQCSADSNCHVDRTCRKRCPSCRF 75
Query: 188 QKCLEVGMKLE 198
QKCL +GMK+E
Sbjct: 76 QKCLTMGMKME 86
>gi|7677120|gb|AAF67040.1|AF179216_1 NHR-25 [Caenorhabditis elegans]
Length = 233
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 57/72 (79%), Positives = 64/72 (88%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E+CPVCGD+VSGYHYGLLTCESCKGFFKRTVQNKK Y C AE +CH+D+T RKRCP CRF
Sbjct: 16 EMCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKQYQCSAEANCHVDRTCRKRCPSCRF 75
Query: 188 QKCLEVGMKLEV 199
QKCL +GMK+E
Sbjct: 76 QKCLTMGMKMEA 87
>gi|4104218|gb|AAD01975.1| steroidogenic factor 1 [Trachemys scripta]
Length = 466
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 64/75 (85%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC ++ IDKTQRKRCP
Sbjct: 7 EDPNQLCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQNSKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGM+LE
Sbjct: 67 YCRFQKCLTVGMRLE 81
>gi|348570102|ref|XP_003470836.1| PREDICTED: LOW QUALITY PROTEIN: steroidogenic factor 1-like [Cavia
porcellus]
Length = 461
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 63/75 (84%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E + ELCPVCG + GYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLYELCPVCGTRCPGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>gi|268580405|ref|XP_002645185.1| C. briggsae CBR-NHR-25 protein [Caenorhabditis briggsae]
Length = 565
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 56/71 (78%), Positives = 63/71 (88%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E CPVCGD+VSGYHYGLLTCESCKGFFKRTVQNKK Y C A+ +CH+D+T RKRCP CRF
Sbjct: 16 EQCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKQYQCSADANCHVDRTCRKRCPSCRF 75
Query: 188 QKCLEVGMKLE 198
QKCL +GMK+E
Sbjct: 76 QKCLTMGMKME 86
>gi|339247129|ref|XP_003375198.1| nuclear hormone receptor FTZ-F1 [Trichinella spiralis]
gi|316971508|gb|EFV55267.1| nuclear hormone receptor FTZ-F1 [Trichinella spiralis]
Length = 114
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 67/73 (91%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
I++ CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY C A+++C IDKT RKRCP C
Sbjct: 36 IQDCCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYQCSADQNCPIDKTCRKRCPHC 95
Query: 186 RFQKCLEVGMKLE 198
RFQKCL+VGMK+E
Sbjct: 96 RFQKCLKVGMKIE 108
>gi|118343798|ref|NP_001071721.1| nuclear receptor [Ciona intestinalis]
gi|70569703|dbj|BAE06460.1| nuclear receptor [Ciona intestinalis]
Length = 504
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/76 (77%), Positives = 63/76 (82%)
Query: 123 KEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRC 182
K ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTCV CHI+K QRK C
Sbjct: 2 KYSLDEVCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNGKKYTCVHTSKCHINKDQRKGC 61
Query: 183 PFCRFQKCLEVGMKLE 198
CRFQKCL VGMKLE
Sbjct: 62 QACRFQKCLRVGMKLE 77
>gi|410902791|ref|XP_003964877.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
[Takifugu rubripes]
Length = 539
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 63/73 (86%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EE CPVCGD+VSGYHYGLLTCESCKGFFKR+VQN K YTC ++SC ++ +QRKRCPFCR
Sbjct: 46 EESCPVCGDRVSGYHYGLLTCESCKGFFKRSVQNNKDYTCAEQQSCPMNLSQRKRCPFCR 105
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGMK E
Sbjct: 106 FQKCLAVGMKREA 118
>gi|384081145|dbj|BAM11008.1| steroidogenic factor 1, partial [Buergeria buergeri]
Length = 403
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/66 (84%), Positives = 59/66 (89%)
Query: 133 CGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLE 192
CGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP+CRFQKCL
Sbjct: 1 CGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCTENQSCKIDKTQRKRCPYCRFQKCLN 60
Query: 193 VGMKLE 198
VGM+LE
Sbjct: 61 VGMRLE 66
>gi|432869184|ref|XP_004071664.1| PREDICTED: nuclear receptor subfamily 5 group A member 2 [Oryzias
latipes]
Length = 536
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 62/73 (84%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EE CPVCGDKVSGYHYGLLTCESCKGFFKR+VQN K Y C ++SC ++ +QRKRCPFCR
Sbjct: 48 EESCPVCGDKVSGYHYGLLTCESCKGFFKRSVQNNKHYICAEQQSCPMNLSQRKRCPFCR 107
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGMK E
Sbjct: 108 FQKCLAVGMKREA 120
>gi|212277020|gb|ACJ22902.1| steroidogenic factor 1, partial [Bombina orientalis]
Length = 258
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 59/67 (88%)
Query: 133 CGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLE 192
CGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP+CRFQKCL
Sbjct: 1 CGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCTENQSCKIDKTQRKRCPYCRFQKCLT 60
Query: 193 VGMKLEV 199
VGM+LE
Sbjct: 61 VGMRLEA 67
>gi|190340082|gb|AAI63909.1| Nr5a5 protein [Danio rerio]
Length = 537
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 64/80 (80%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
P++ EE CPVCGD+VSGYHYGLLTCESCKGFFKR+VQN K YTC ++C +D QR
Sbjct: 41 PESSATQEEGCPVCGDRVSGYHYGLLTCESCKGFFKRSVQNNKRYTCAEAQNCPMDLAQR 100
Query: 180 KRCPFCRFQKCLEVGMKLEV 199
KRCP+CRFQKC+ VGMK E
Sbjct: 101 KRCPYCRFQKCVAVGMKKEA 120
>gi|47550853|ref|NP_999944.1| nuclear receptor subfamily 5, group A, member 5 isoform 1 [Danio
rerio]
gi|13345357|gb|AAK19303.1|AF327373_1 Ff1c [Danio rerio]
Length = 537
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 64/80 (80%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
P++ EE CPVCGD+VSGYHYGLLTCESCKGFFKR+VQN K YTC ++C +D QR
Sbjct: 41 PESSATQEEGCPVCGDRVSGYHYGLLTCESCKGFFKRSVQNNKRYTCAEAQNCPMDLAQR 100
Query: 180 KRCPFCRFQKCLEVGMKLEV 199
KRCP+CRFQKC+ VGMK E
Sbjct: 101 KRCPYCRFQKCVAVGMKKEA 120
>gi|348509457|ref|XP_003442265.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
[Oreochromis niloticus]
Length = 543
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 65/79 (82%)
Query: 121 DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK 180
+++ E+ CPVCGDKVSGYHYGLLTCESCKGFFKR+VQN K YTC ++ C ++ +QRK
Sbjct: 42 ESRPDSEDSCPVCGDKVSGYHYGLLTCESCKGFFKRSVQNNKHYTCAEQQRCPMNLSQRK 101
Query: 181 RCPFCRFQKCLEVGMKLEV 199
RCPFCRFQKCL VGMK E
Sbjct: 102 RCPFCRFQKCLAVGMKKEA 120
>gi|170586796|ref|XP_001898165.1| Nuclear hormone receptor family member nhr-25 [Brugia malayi]
gi|158594560|gb|EDP33144.1| Nuclear hormone receptor family member nhr-25, putative [Brugia
malayi]
Length = 558
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 66/78 (84%), Gaps = 1/78 (1%)
Query: 123 KEGIE-ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
K IE E CPVCGD+VSGYHYGLLTCESCKGFFKRTVQNKK Y C A+++C +DK+ RKR
Sbjct: 16 KPQIEYENCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKSYQCSADQNCAVDKSCRKR 75
Query: 182 CPFCRFQKCLEVGMKLEV 199
CP CRFQKC++ GMK+E
Sbjct: 76 CPHCRFQKCIQRGMKVEA 93
>gi|63100824|gb|AAH95570.1| Nr5a5 protein [Danio rerio]
Length = 229
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 64/80 (80%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
P++ EE CPVCGD+VSGYHYGLLTCESC+GFFKR+VQN K YTC ++C +D QR
Sbjct: 41 PESSATQEEGCPVCGDRVSGYHYGLLTCESCEGFFKRSVQNNKRYTCAEAQNCPMDLAQR 100
Query: 180 KRCPFCRFQKCLEVGMKLEV 199
KRCP+CRFQKCL VGMK E
Sbjct: 101 KRCPYCRFQKCLAVGMKKEA 120
>gi|324505531|gb|ADY42376.1| Nuclear hormone receptor family member nhr-25 [Ascaris suum]
Length = 529
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 63/72 (87%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E CPVCGD+VSGYHYGLLTCESCKGFFKRTVQNKK Y C A+++C +DK+ RKRCP CRF
Sbjct: 22 ENCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKSYQCSADQNCAVDKSCRKRCPHCRF 81
Query: 188 QKCLEVGMKLEV 199
QKC++ GMK+E
Sbjct: 82 QKCIQRGMKVEA 93
>gi|170578454|ref|XP_001894417.1| Nuclear hormone receptor family member nhr-25 [Brugia malayi]
gi|158599012|gb|EDP36743.1| Nuclear hormone receptor family member nhr-25, putative [Brugia
malayi]
Length = 543
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 66/78 (84%), Gaps = 1/78 (1%)
Query: 123 KEGIE-ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
K IE E CPVCGD+VSGYHYGLLTCESCKGFFKRTVQNKK Y C A+++C IDK+ RKR
Sbjct: 16 KPQIEYENCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKSYQCSADQNCAIDKSCRKR 75
Query: 182 CPFCRFQKCLEVGMKLEV 199
CP CRFQKC++ GMK++
Sbjct: 76 CPHCRFQKCIQRGMKIDA 93
>gi|116267937|ref|NP_001070740.1| nuclear receptor subfamily 5, group A, member 5 isoform 2 [Danio
rerio]
gi|115528620|gb|AAI24757.1| Nuclear receptor subfamily 5, group A, member 5 [Danio rerio]
Length = 511
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 64/80 (80%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
P++ EE CPVCGD+VSGYHYGLLTCESCKGFFKR+VQN K YTC ++C +D QR
Sbjct: 15 PESSATQEEGCPVCGDRVSGYHYGLLTCESCKGFFKRSVQNNKRYTCAEAQNCPMDLAQR 74
Query: 180 KRCPFCRFQKCLEVGMKLEV 199
KRCP+CRFQKC+ VGMK E
Sbjct: 75 KRCPYCRFQKCVAVGMKKEA 94
>gi|312069796|ref|XP_003137849.1| hypothetical protein LOAG_02263 [Loa loa]
gi|307766989|gb|EFO26223.1| hypothetical protein LOAG_02263 [Loa loa]
Length = 558
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 66/78 (84%), Gaps = 1/78 (1%)
Query: 123 KEGIE-ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
K IE E CPVCGD+VSGYHYGLLTCESCKGFFKRTVQNKK Y C A+++C +DK+ RKR
Sbjct: 16 KPQIEYENCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKSYQCSADQNCAVDKSCRKR 75
Query: 182 CPFCRFQKCLEVGMKLEV 199
CP CRFQKC++ GMK+E
Sbjct: 76 CPHCRFQKCIQRGMKVEA 93
>gi|198472844|ref|XP_001356089.2| GA21254 [Drosophila pseudoobscura pseudoobscura]
gi|198139186|gb|EAL33148.2| GA21254 [Drosophila pseudoobscura pseudoobscura]
Length = 847
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 19/191 (9%)
Query: 28 TPIQQLLSAATGAQTPQMQHSNNDTQSSQLS-------PMLGNNTSASAGGAGYNFNNMV 80
+P Q L++ TP + +N+D S P + A AG + N V
Sbjct: 273 SPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPAGSIYGNGV 332
Query: 81 DNSYLFQSP-------GGGST-----NMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEE 128
+ + P GGS+ N+ + SA + P + ++ A+P ++ I
Sbjct: 333 HHHGMLYRPLKAEASSTGGSSQESAQNLSMDSASSAMDPLGSGSLPASPAGISRQQLINS 392
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y CV C + + RK+CP CRF+
Sbjct: 393 PCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFE 452
Query: 189 KCLEVGMKLEV 199
KCL+ GMKLE
Sbjct: 453 KCLQKGMKLEA 463
>gi|195161705|ref|XP_002021702.1| GL26651 [Drosophila persimilis]
gi|194103502|gb|EDW25545.1| GL26651 [Drosophila persimilis]
Length = 844
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 19/191 (9%)
Query: 28 TPIQQLLSAATGAQTPQMQHSNNDTQSSQLS-------PMLGNNTSASAGGAGYNFNNMV 80
+P Q L++ TP + +N+D S P + A AG + N V
Sbjct: 270 SPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPAGSIYGNGV 329
Query: 81 DNSYLFQSP-------GGGST-----NMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEE 128
+ + P GGS+ N+ + SA + P + ++ A+P ++ I
Sbjct: 330 HHHGMLYRPLKAEASSTGGSSQESAQNLSMDSASSAMDPLGSGSLPASPAGISRQQLINS 389
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y CV C + + RK+CP CRF+
Sbjct: 390 PCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFE 449
Query: 189 KCLEVGMKLEV 199
KCL+ GMKLE
Sbjct: 450 KCLQKGMKLEA 460
>gi|313214496|emb|CBY40854.1| unnamed protein product [Oikopleura dioica]
Length = 532
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 61/73 (83%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EE CP+CGDK++GYHYG+LTCESCKGFFKRTVQNKK Y C+ C I+K QRKRCP CR
Sbjct: 103 EEPCPICGDKITGYHYGILTCESCKGFFKRTVQNKKKYQCIDLGDCVINKIQRKRCPSCR 162
Query: 187 FQKCLEVGMKLEV 199
+QKC+ +GMKLE
Sbjct: 163 YQKCMRMGMKLEA 175
>gi|341893867|gb|EGT49802.1| hypothetical protein CAEBREN_24901 [Caenorhabditis brenneri]
Length = 494
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 61/73 (83%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
++LCP+C DKV+GYHYGLLTCESCKGFFKRTVQN+K Y C +CHID+ RKRCP CR
Sbjct: 9 DKLCPICQDKVTGYHYGLLTCESCKGFFKRTVQNRKDYVCSWHSNCHIDRRSRKRCPSCR 68
Query: 187 FQKCLEVGMKLEV 199
F+KCL +GMK +V
Sbjct: 69 FRKCLLMGMKTDV 81
>gi|313236936|emb|CBY12184.1| unnamed protein product [Oikopleura dioica]
Length = 517
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 61/73 (83%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EE CP+CGDK++GYHYG+LTCESCKGFFKRTVQNKK Y C+ C I+K QRKRCP CR
Sbjct: 103 EEPCPICGDKITGYHYGILTCESCKGFFKRTVQNKKKYQCIDLGDCVINKIQRKRCPSCR 162
Query: 187 FQKCLEVGMKLEV 199
+QKC+ +GMKLE
Sbjct: 163 YQKCMRMGMKLEA 175
>gi|256073263|ref|XP_002572951.1| steroid hormone receptor ad4bp [Schistosoma mansoni]
gi|353230970|emb|CCD77387.1| putative steroidogenic factor 1 (stf-1) (sf-1) (adrenal 4 binding
protein) (steroid hormone receptor ad4bp) (fushi tarazu
factor homolog 1) [Schistosoma mansoni]
Length = 1457
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 59/71 (83%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E CP+CGDKVSGYHYGL TCESCKGFFKRTVQNKK Y C + +C +D+ RKRC +CRF
Sbjct: 107 ENCPICGDKVSGYHYGLPTCESCKGFFKRTVQNKKEYHCNEQGNCVVDRLHRKRCAYCRF 166
Query: 188 QKCLEVGMKLE 198
QKCL VGM++E
Sbjct: 167 QKCLIVGMRVE 177
>gi|195443384|ref|XP_002069397.1| GK18731 [Drosophila willistoni]
gi|194165482|gb|EDW80383.1| GK18731 [Drosophila willistoni]
Length = 823
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 70/104 (67%)
Query: 96 MDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFK 155
MD +S+ + ST+ A+P ++ I CP+CGDK+SG+HYG+ +CESCKGFFK
Sbjct: 350 MDANSSSVDPTGSSNSTLPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFK 409
Query: 156 RTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
RTVQN+K Y CV C + + RK+CP CRF KCL+ GMKLE
Sbjct: 410 RTVQNRKNYVCVRGGPCQVSISTRKKCPACRFDKCLQKGMKLEA 453
>gi|56131042|gb|AAV80237.1| FTZ-F1-alpha [Schistosoma mansoni]
Length = 1892
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 59/71 (83%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E CP+CGDKVSGYHYGL TCESCKGFFKRTVQNKK Y C + +C +D+ RKRC +CRF
Sbjct: 107 ENCPICGDKVSGYHYGLPTCESCKGFFKRTVQNKKEYHCNEQGNCVVDRLHRKRCAYCRF 166
Query: 188 QKCLEVGMKLE 198
QKCL VGM++E
Sbjct: 167 QKCLIVGMRVE 177
>gi|195030764|ref|XP_001988220.1| GH10687 [Drosophila grimshawi]
gi|193904220|gb|EDW03087.1| GH10687 [Drosophila grimshawi]
Length = 836
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 73/105 (69%), Gaps = 2/105 (1%)
Query: 95 NMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFF 154
N+ + + G + ++T+AA+P ++ I CP+CGDK+SG+HYG+ +CESCKGFF
Sbjct: 366 NLSMDAGGAALDA--SATLAASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFF 423
Query: 155 KRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
KRTVQN+K Y CV C + + RK+CP CRF+KCL+ GMKLE
Sbjct: 424 KRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEA 468
>gi|170036043|ref|XP_001845875.1| nuclear hormone receptor FTZ-F1 beta [Culex quinquefasciatus]
gi|167878566|gb|EDS41949.1| nuclear hormone receptor FTZ-F1 beta [Culex quinquefasciatus]
Length = 803
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 97/196 (49%), Gaps = 41/196 (20%)
Query: 28 TPIQQLLSAATGAQTPQMQHSNNDTQSSQL-----------SPMLG-NNTSASAGGAGYN 75
+P Q L++ TP + +N+D S SP+ G +N A A G YN
Sbjct: 269 SPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNMFAPAAGGSYN 328
Query: 76 ---------FNNMVDNSYLFQSPGGGSTNMD---LSSAGISYHPFHTSTIAATPEHPDTK 123
+ M+DN + G D L S GIS +
Sbjct: 329 GSPLHHSVLYKPMIDNEQALKLAGQEEPIFDSEHLPSPGIS-----------------RQ 371
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ SC + RK+CP
Sbjct: 372 QLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGASCPVTIATRKKCP 431
Query: 184 FCRFQKCLEVGMKLEV 199
CRF+KCL+ GMKLE
Sbjct: 432 ACRFEKCLQKGMKLEA 447
>gi|7513538|pir||T01791 steroidogenic factor 1 - bovine (fragment)
gi|5705930|gb|AAB23574.2| steroidogenic factor 1 [Bos taurus]
Length = 67
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/69 (84%), Positives = 60/69 (86%), Gaps = 2/69 (2%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRK PFCRFQK
Sbjct: 1 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRK--PFCRFQK 58
Query: 190 CLEVGMKLE 198
CL VGM+LE
Sbjct: 59 CLTVGMRLE 67
>gi|402590122|gb|EJW84053.1| hypothetical protein WUBG_05036 [Wuchereria bancrofti]
Length = 93
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 63/71 (88%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E CPVCGD+VSGYHYGLLTCESCKGFFKRTVQNKK Y C A+++C +DK+ RKRCP CRF
Sbjct: 22 ENCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKSYQCSADQNCAVDKSCRKRCPHCRF 81
Query: 188 QKCLEVGMKLE 198
QKC++ GMK+E
Sbjct: 82 QKCIQRGMKVE 92
>gi|358337145|dbj|GAA55561.1| nuclear hormone receptor family member nhr-25, partial [Clonorchis
sinensis]
Length = 588
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 66/95 (69%), Gaps = 10/95 (10%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E CP+CGD+VSGYHYGL TCESCKGFFKRTVQNKK Y C + +C ID+ RKRC CRF
Sbjct: 22 ERCPICGDRVSGYHYGLPTCESCKGFFKRTVQNKKEYHCTEQGNCVIDRIHRKRCAHCRF 81
Query: 188 QKCLEVGMKLEVSSQSTHGVVVIWSPHSPSISENL 222
QKCL VGM++EVS WS + P + +
Sbjct: 82 QKCLAVGMRVEVS----------WSLNIPQVLRDF 106
>gi|410979136|ref|XP_003995942.1| PREDICTED: LOW QUALITY PROTEIN: steroidogenic factor 1 [Felis
catus]
Length = 459
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 58/69 (84%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGD+ +G HYG+++CE CKGFFKRT+QN K YTC +SC IDKTQRKRCPFCRFQK
Sbjct: 11 CLICGDRATGLHYGIISCEGCKGFFKRTIQNNKHYTCTESQSCKIDKTQRKRCPFCRFQK 70
Query: 190 CLEVGMKLE 198
CL VGM+LE
Sbjct: 71 CLTVGMRLE 79
>gi|17136822|ref|NP_476933.1| hormone receptor-like in 39, isoform C [Drosophila melanogaster]
gi|22946993|gb|AAN11109.1| hormone receptor-like in 39, isoform C [Drosophila melanogaster]
Length = 701
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 71/108 (65%), Gaps = 8/108 (7%)
Query: 92 GSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCK 151
S+N+D G S HP A+P ++ I CP+CGDK+SG+HYG+ +CESCK
Sbjct: 346 ASSNLDTVGLG-SSHP-------ASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCK 397
Query: 152 GFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
GFFKRTVQN+K Y CV C + + RK+CP CRF+KCL+ GMKLE
Sbjct: 398 GFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEA 445
>gi|195398359|ref|XP_002057789.1| GJ18326 [Drosophila virilis]
gi|194141443|gb|EDW57862.1| GJ18326 [Drosophila virilis]
Length = 851
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%)
Query: 111 STIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 170
+T+ A+P ++ I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y CV
Sbjct: 400 ATLPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGG 459
Query: 171 SCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C + + RK+CP CRF+KCL+ GMKLE
Sbjct: 460 PCQVSISTRKKCPACRFEKCLQKGMKLEA 488
>gi|194878361|ref|XP_001974047.1| GG21291 [Drosophila erecta]
gi|190657234|gb|EDV54447.1| GG21291 [Drosophila erecta]
Length = 808
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 71/108 (65%), Gaps = 8/108 (7%)
Query: 92 GSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCK 151
S+N+D G S HP A+P ++ I CP+CGDK+SG+HYG+ +CESCK
Sbjct: 346 ASSNLDAVGLG-SSHP-------ASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCK 397
Query: 152 GFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
GFFKRTVQN+K Y CV C + + RK+CP CRF+KCL+ GMKLE
Sbjct: 398 GFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEA 445
>gi|290226|gb|AAA28543.1| steroid receptor [Drosophila melanogaster]
Length = 808
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 71/108 (65%), Gaps = 8/108 (7%)
Query: 92 GSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCK 151
S+N+D G S HP A+P ++ I CP+CGDK+SG+HYG+ +CESCK
Sbjct: 346 ASSNLDTVGLG-SSHP-------ASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCK 397
Query: 152 GFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
GFFKRTVQN+K Y CV C + + RK+CP CRF+KCL+ GMKLE
Sbjct: 398 GFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEA 445
>gi|17136820|ref|NP_476932.1| hormone receptor-like in 39, isoform A [Drosophila melanogaster]
gi|19549535|ref|NP_599123.1| hormone receptor-like in 39, isoform B [Drosophila melanogaster]
gi|24585624|ref|NP_724322.1| hormone receptor-like in 39, isoform D [Drosophila melanogaster]
gi|55584048|sp|Q05192.3|FTF1B_DROME RecName: Full=Nuclear hormone receptor FTZ-F1 beta; AltName:
Full=Nuclear hormone receptor HR39; Short=dHR39;
AltName: Full=Nuclear receptor subfamily 5 group B
member 1
gi|7298773|gb|AAF53984.1| hormone receptor-like in 39, isoform B [Drosophila melanogaster]
gi|17862688|gb|AAL39821.1| LD45021p [Drosophila melanogaster]
gi|22946991|gb|AAN11107.1| hormone receptor-like in 39, isoform A [Drosophila melanogaster]
gi|22946992|gb|AAN11108.1| hormone receptor-like in 39, isoform D [Drosophila melanogaster]
gi|220942376|gb|ACL83731.1| Hr39-PA [synthetic construct]
Length = 808
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 71/108 (65%), Gaps = 8/108 (7%)
Query: 92 GSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCK 151
S+N+D G S HP A+P ++ I CP+CGDK+SG+HYG+ +CESCK
Sbjct: 346 ASSNLDTVGLG-SSHP-------ASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCK 397
Query: 152 GFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
GFFKRTVQN+K Y CV C + + RK+CP CRF+KCL+ GMKLE
Sbjct: 398 GFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEA 445
>gi|195352073|ref|XP_002042539.1| GM23404 [Drosophila sechellia]
gi|194124408|gb|EDW46451.1| GM23404 [Drosophila sechellia]
Length = 808
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 71/107 (66%), Gaps = 8/107 (7%)
Query: 93 STNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKG 152
S+N+D G S HP A+P ++ I CP+CGDK+SG+HYG+ +CESCKG
Sbjct: 347 SSNLDTVGLG-SSHP-------ASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKG 398
Query: 153 FFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
FFKRTVQN+K Y CV C + + RK+CP CRF+KCL+ GMKLE
Sbjct: 399 FFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEA 445
>gi|195580635|ref|XP_002080140.1| GD24312 [Drosophila simulans]
gi|194192149|gb|EDX05725.1| GD24312 [Drosophila simulans]
Length = 808
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 71/107 (66%), Gaps = 8/107 (7%)
Query: 93 STNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKG 152
S+N+D G S HP A+P ++ I CP+CGDK+SG+HYG+ +CESCKG
Sbjct: 347 SSNLDTVGLG-SSHP-------ASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKG 398
Query: 153 FFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
FFKRTVQN+K Y CV C + + RK+CP CRF+KCL+ GMKLE
Sbjct: 399 FFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEA 445
>gi|195116459|ref|XP_002002772.1| GI11193 [Drosophila mojavensis]
gi|193913347|gb|EDW12214.1| GI11193 [Drosophila mojavensis]
Length = 889
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 64/88 (72%)
Query: 112 TIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERS 171
T+ A+P ++ I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y CV
Sbjct: 397 TLPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGP 456
Query: 172 CHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C + + RK+CP CRF+KCL+ GMKLE
Sbjct: 457 CQVSISTRKKCPACRFEKCLQKGMKLEA 484
>gi|391337811|ref|XP_003743258.1| PREDICTED: uncharacterized protein LOC100903837 [Metaseiulus
occidentalis]
Length = 861
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 5/87 (5%)
Query: 116 TPEHPDTKEGIEE-----LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 170
+P+ P +E EE +C +C DK +G HYG++TCE CKGFFKRTVQNK+VYTCVAE
Sbjct: 433 SPKEPGKEETDEEDDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRVYTCVAEG 492
Query: 171 SCHIDKTQRKRCPFCRFQKCLEVGMKL 197
+C I+K QR RC +CRFQKCL GM L
Sbjct: 493 NCEINKAQRNRCQYCRFQKCLLQGMVL 519
>gi|345805854|ref|XP_852030.2| PREDICTED: steroidogenic factor 1 [Canis lupus familiaris]
Length = 497
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 60/79 (75%)
Query: 121 DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK 180
D + C +CGD+ +G HYG+++CE CKGFFKR++ NK+ YTC +SC IDKTQRK
Sbjct: 40 DNDRAEQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRPYTCTESQSCKIDKTQRK 99
Query: 181 RCPFCRFQKCLEVGMKLEV 199
RCPFCRFQKCL VGM+LE
Sbjct: 100 RCPFCRFQKCLTVGMRLEA 118
>gi|3093388|emb|CAA06670.1| thr4 [Tenebrio molitor]
Length = 810
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 59/70 (84%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K QRKRCP+CRF+
Sbjct: 399 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGNCEITKAQRKRCPYCRFK 458
Query: 189 KCLEVGMKLE 198
KC+E GM L+
Sbjct: 459 KCIEQGMVLQ 468
>gi|195475922|ref|XP_002090232.1| GE12908 [Drosophila yakuba]
gi|194176333|gb|EDW89944.1| GE12908 [Drosophila yakuba]
Length = 808
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 82/138 (59%), Gaps = 19/138 (13%)
Query: 62 GNNTSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPD 121
++T AS+G N + M +S + + G GS+ HP A+P
Sbjct: 327 ASSTVASSGQEAQNLS-MDSSSSILDAVGLGSS-----------HP-------ASPAGIS 367
Query: 122 TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
++ I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y CV C + + RK+
Sbjct: 368 RQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKK 427
Query: 182 CPFCRFQKCLEVGMKLEV 199
CP CRF+KCL+ GMKLE
Sbjct: 428 CPACRFEKCLQKGMKLEA 445
>gi|194760891|ref|XP_001962666.1| GF14318 [Drosophila ananassae]
gi|190616363|gb|EDV31887.1| GF14318 [Drosophila ananassae]
Length = 810
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 63/87 (72%)
Query: 113 IAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
+ A+P ++ I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y CV C
Sbjct: 359 LPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPC 418
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLEV 199
+ + RK+CP CRF+KCL+ GMKLE
Sbjct: 419 QVSISTRKKCPACRFEKCLQKGMKLEA 445
>gi|321456767|gb|EFX67867.1| hypothetical protein DAPPUDRAFT_203579 [Daphnia pulex]
Length = 728
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Query: 75 NFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCG 134
N NN+ D + + S G LS A S H ++P D E +C +C
Sbjct: 277 NSNNVQDAASIRLSIDGL-----LSLAQSSSDRRHGVVSRSSPPQED-DEDTPMICMICE 330
Query: 135 DKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVG 194
DK +G HYG++TCE CKGFFKRTVQNK+VYTCVAE +C I K QR RC +CRFQKCL G
Sbjct: 331 DKATGLHYGIITCEGCKGFFKRTVQNKRVYTCVAEGNCEITKAQRNRCQYCRFQKCLAQG 390
Query: 195 MKL 197
M L
Sbjct: 391 MVL 393
>gi|157234|gb|AAA28463.1| DHR39-short [Drosophila melanogaster]
Length = 701
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 70/108 (64%), Gaps = 8/108 (7%)
Query: 92 GSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCK 151
S+N+D G S HP A+P ++ I CP+CGDK+SG+HY + +CESCK
Sbjct: 346 ASSNLDTVGLG-SSHP-------ASPAGISRQQLINSPCPICGDKISGFHYFIFSCESCK 397
Query: 152 GFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
GFFKRTVQN+K Y CV C + + RK+CP CRF+KCL+ GMKLE
Sbjct: 398 GFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEA 445
>gi|242009214|ref|XP_002425386.1| orphan nuclear receptor nr6a1, putative [Pediculus humanus
corporis]
gi|212509180|gb|EEB12648.1| orphan nuclear receptor nr6a1, putative [Pediculus humanus
corporis]
Length = 778
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 63/87 (72%)
Query: 112 TIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERS 171
TI P+H + +C +C D+ +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +
Sbjct: 352 TIIGEPKHDPEDDEQPMICMICEDRATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGN 411
Query: 172 CHIDKTQRKRCPFCRFQKCLEVGMKLE 198
C I K QR RC +CRF+KC+E GM L+
Sbjct: 412 CEITKAQRNRCQYCRFKKCIEQGMVLQ 438
>gi|442614855|ref|NP_001259161.1| Hr4, isoform I [Drosophila melanogaster]
gi|440216344|gb|AGB95007.1| Hr4, isoform I [Drosophila melanogaster]
Length = 2123
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 908 PHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 967
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 968 AQRNRCQYCRFKKCIEQGMVLQA 990
>gi|195041914|ref|XP_001991338.1| GH12110 [Drosophila grimshawi]
gi|193901096|gb|EDV99962.1| GH12110 [Drosophila grimshawi]
Length = 1600
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 968 PHEPTDEDDQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 1027
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 1028 AQRNRCQYCRFKKCIEQGMVLQA 1050
>gi|195130261|ref|XP_002009571.1| GI15166 [Drosophila mojavensis]
gi|193908021|gb|EDW06888.1| GI15166 [Drosophila mojavensis]
Length = 1517
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 61/82 (74%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 919 PHEPTDEDDQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 978
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CRF+KC+E GM L+
Sbjct: 979 AQRNRCQYCRFKKCIEQGMVLQ 1000
>gi|307204330|gb|EFN83085.1| Nuclear hormone receptor FTZ-F1 beta [Harpegnathos saltator]
Length = 934
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 72/123 (58%), Gaps = 22/123 (17%)
Query: 99 SSAGISYHPFHTSTIAATPEHPD----------------------TKEGIEELCPVCGDK 136
+SA ++ H + TS++ + PD ++ I CP+CGDK
Sbjct: 412 ASAAVTSHHYSTSSLPGSELSPDGHPVAEDQEDCRIPSAPSGISTRQQLINSPCPICGDK 471
Query: 137 VSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMK 196
+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ C + T RK+CP CRF KCL +GMK
Sbjct: 472 ISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVTTRKKCPACRFDKCLNMGMK 531
Query: 197 LEV 199
LE
Sbjct: 532 LEA 534
>gi|157232|gb|AAA28462.1| DHR39 [Drosophila melanogaster]
gi|157236|gb|AAA28464.1| DHR39 [Drosophila melanogaster]
Length = 808
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 70/108 (64%), Gaps = 8/108 (7%)
Query: 92 GSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCK 151
S+N+D G S HP A+P ++ I CP+CGDK+SG+HY + +CESCK
Sbjct: 346 ASSNLDTVGLG-SSHP-------ASPAGISRQQLINSPCPICGDKISGFHYFIFSCESCK 397
Query: 152 GFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
GFFKRTVQN+K Y CV C + + RK+CP CRF+KCL+ GMKLE
Sbjct: 398 GFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEA 445
>gi|442614853|ref|NP_001259160.1| Hr4, isoform H [Drosophila melanogaster]
gi|440216343|gb|AGB95006.1| Hr4, isoform H [Drosophila melanogaster]
Length = 1863
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 908 PHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 967
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 968 AQRNRCQYCRFKKCIEQGMVLQA 990
>gi|195447738|ref|XP_002071348.1| GK25182 [Drosophila willistoni]
gi|194167433|gb|EDW82334.1| GK25182 [Drosophila willistoni]
Length = 1538
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 922 PHEPTDEDDQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 981
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 982 AQRNRCQYCRFKKCIEQGMVLQA 1004
>gi|343796204|gb|AEM63541.1| adrenal 4-binding protein/steroidogenic factor 1 [Clarias
gariepinus]
Length = 87
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 56/64 (87%)
Query: 136 KVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
+VSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRC +CRFQKCL VGM
Sbjct: 1 QVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCLYCRFQKCLNVGM 60
Query: 196 KLEV 199
KLE
Sbjct: 61 KLEA 64
>gi|345485218|ref|XP_001603526.2| PREDICTED: nuclear hormone receptor FTZ-F1 beta [Nasonia
vitripennis]
Length = 936
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 113 IAATPEHPDTKEG-IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERS 171
IA+ P T++ I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+
Sbjct: 458 IASAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAG 517
Query: 172 CHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C + RK+CP CRF KCL +GMKLE
Sbjct: 518 CPVTVATRKKCPACRFDKCLNMGMKLEA 545
>gi|157117289|ref|XP_001653014.1| nuclear hormone receptor ftz-f1 beta [Aedes aegypti]
gi|108883356|gb|EAT47581.1| AAEL001304-PA [Aedes aegypti]
Length = 803
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 96/193 (49%), Gaps = 38/193 (19%)
Query: 28 TPIQQLLSAATGAQTPQMQHSNNDTQSSQL-----------SPMLGNN---TSASAGGAG 73
+P Q L++ TP + +N+D S SP+ G + TS S G+
Sbjct: 257 SPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNMFTSGSYNGSP 316
Query: 74 YN----FNNMVDNSYLFQSPGGGSTNMD---LSSAGISYHPFHTSTIAATPEHPDTKEGI 126
+ F M+DN + D L S GIS ++ I
Sbjct: 317 LHHSVLFKPMIDNEQALKLANQDEPVFDSEHLPSPGISR-----------------QQLI 359
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ +C + RK+CP CR
Sbjct: 360 NSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYQCLRGAACPVTIATRKKCPACR 419
Query: 187 FQKCLEVGMKLEV 199
F+KCL+ GMKLE
Sbjct: 420 FEKCLQKGMKLEA 432
>gi|198470586|ref|XP_002133512.1| GA22933 [Drosophila pseudoobscura pseudoobscura]
gi|198145522|gb|EDY72140.1| GA22933 [Drosophila pseudoobscura pseudoobscura]
Length = 1592
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 957 PHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 1016
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 1017 AQRNRCQYCRFKKCIEQGMVLQA 1039
>gi|442614844|ref|NP_001259156.1| Hr4, isoform G [Drosophila melanogaster]
gi|440216339|gb|AGB95002.1| Hr4, isoform G [Drosophila melanogaster]
Length = 1986
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 1375 PHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 1434
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 1435 AQRNRCQYCRFKKCIEQGMVLQA 1457
>gi|321463455|gb|EFX74471.1| hypothetical protein DAPPUDRAFT_57218 [Daphnia pulex]
Length = 555
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 109 HTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA 168
HT+++AA ++ I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQNKK Y C+
Sbjct: 120 HTASLAAQ-AGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNKKNYVCLR 178
Query: 169 ERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
+C + RK+CP CRF+KCL GMKLE
Sbjct: 179 GAACPVTIATRKKCPACRFEKCLNTGMKLEA 209
>gi|442614850|ref|NP_001259159.1| Hr4, isoform D [Drosophila melanogaster]
gi|440216342|gb|AGB95005.1| Hr4, isoform D [Drosophila melanogaster]
Length = 1529
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 918 PHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 977
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 978 AQRNRCQYCRFKKCIEQGMVLQA 1000
>gi|442614857|ref|NP_001259162.1| Hr4, isoform J [Drosophila melanogaster]
gi|442614859|ref|NP_001259163.1| Hr4, isoform K [Drosophila melanogaster]
gi|440216345|gb|AGB95008.1| Hr4, isoform J [Drosophila melanogaster]
gi|440216346|gb|AGB95009.1| Hr4, isoform K [Drosophila melanogaster]
Length = 1843
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 1232 PHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 1291
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 1292 AQRNRCQYCRFKKCIEQGMVLQA 1314
>gi|442614848|ref|NP_001259158.1| Hr4, isoform E [Drosophila melanogaster]
gi|440216341|gb|AGB95004.1| Hr4, isoform E [Drosophila melanogaster]
Length = 1842
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 1232 PHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 1291
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 1292 AQRNRCQYCRFKKCIEQGMVLQA 1314
>gi|85724782|ref|NP_001033823.1| Hr4, isoform C [Drosophila melanogaster]
gi|68056708|sp|Q9W539.4|HR4_DROME RecName: Full=Hormone receptor 4; Short=dHR4; AltName: Full=Nuclear
receptor subfamily 6 group A member 2
gi|62184089|gb|AAX73355.1| hormone receptor 4 [Drosophila melanogaster]
gi|84798395|gb|ABC67166.1| Hr4, isoform C [Drosophila melanogaster]
Length = 1518
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 908 PHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 967
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 968 AQRNRCQYCRFKKCIEQGMVLQA 990
>gi|442614846|ref|NP_001259157.1| Hr4, isoform F [Drosophila melanogaster]
gi|440216340|gb|AGB95003.1| Hr4, isoform F [Drosophila melanogaster]
Length = 1611
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 1001 PHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 1060
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 1061 AQRNRCQYCRFKKCIEQGMVLQA 1083
>gi|328789131|ref|XP_394401.4| PREDICTED: hypothetical protein LOC410925 [Apis mellifera]
Length = 1010
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 56/70 (80%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVAE C I K QR RC +CRF+
Sbjct: 528 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVAEGGCEITKAQRNRCQYCRFK 587
Query: 189 KCLEVGMKLE 198
KC+E GM L+
Sbjct: 588 KCIEQGMVLQ 597
>gi|195402055|ref|XP_002059625.1| GJ14872 [Drosophila virilis]
gi|194147332|gb|EDW63047.1| GJ14872 [Drosophila virilis]
Length = 1505
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 889 PHEPTDEDDQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 948
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 949 AQRNRCQYCRFKKCIEQGMVLQA 971
>gi|194912847|ref|XP_001982578.1| GG12896 [Drosophila erecta]
gi|190648254|gb|EDV45547.1| GG12896 [Drosophila erecta]
Length = 1529
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 61/82 (74%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 912 PHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 971
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CRF+KC+E GM L+
Sbjct: 972 AQRNRCQYCRFKKCIEQGMVLQ 993
>gi|4165446|emb|CAA22836.1| EG:133E12.2 [Drosophila melanogaster]
Length = 1464
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 853 PHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 912
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 913 AQRNRCQYCRFKKCIEQGMVLQA 935
>gi|194768719|ref|XP_001966459.1| GF22191 [Drosophila ananassae]
gi|190617223|gb|EDV32747.1| GF22191 [Drosophila ananassae]
Length = 1568
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 61/82 (74%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 957 PHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 1016
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CRF+KC+E GM L+
Sbjct: 1017 AQRNRCQYCRFKKCIEQGMVLQ 1038
>gi|345488275|ref|XP_001603666.2| PREDICTED: hormone receptor 4 [Nasonia vitripennis]
Length = 1026
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 57/70 (81%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C DK +G HYG++TCE CKGFFKRTVQN+++YTCVAE SC I K QR RC +CRF+
Sbjct: 537 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRIYTCVAEGSCEITKAQRNRCQYCRFK 596
Query: 189 KCLEVGMKLE 198
KC++ GM L+
Sbjct: 597 KCMDQGMVLQ 606
>gi|195347785|ref|XP_002040432.1| GM19185 [Drosophila sechellia]
gi|194121860|gb|EDW43903.1| GM19185 [Drosophila sechellia]
Length = 1131
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 903 PHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 962
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 963 AQRNRCQYCRFKKCIEQGMVLQA 985
>gi|158298062|ref|XP_318161.4| AGAP004693-PA [Anopheles gambiae str. PEST]
gi|157014627|gb|EAA13230.4| AGAP004693-PA [Anopheles gambiae str. PEST]
Length = 1085
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 57/70 (81%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K QR RC +CRF+
Sbjct: 613 VCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITKAQRNRCQYCRFK 672
Query: 189 KCLEVGMKLE 198
KC+E GM L+
Sbjct: 673 KCIEQGMVLQ 682
>gi|357603676|gb|EHJ63877.1| nuclear receptor GRF [Danaus plexippus]
Length = 781
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 80/144 (55%), Gaps = 31/144 (21%)
Query: 86 FQSPGGGSTNMDLSSAG-ISYHPFH-----------------------TSTIAATPE--- 118
+ P G NM+L AG +S P H S++ PE
Sbjct: 304 LRRPKGPPLNMELLWAGDVSQLPAHQQIHALNLSAAAGSVSGITGVPSASSLVPRPELRT 363
Query: 119 -HPDTKEGIEE---LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHI 174
P+T+ +E +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ C I
Sbjct: 364 YAPETERDEDEQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGGCEI 423
Query: 175 DKTQRKRCPFCRFQKCLEVGMKLE 198
K QR RC +CRF+KC+E GM L+
Sbjct: 424 TKAQRNRCQYCRFKKCIEQGMVLQ 447
>gi|308486705|ref|XP_003105549.1| hypothetical protein CRE_22475 [Caenorhabditis remanei]
gi|308255515|gb|EFO99467.1| hypothetical protein CRE_22475 [Caenorhabditis remanei]
Length = 733
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 60/71 (84%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E+CP+CGD+VSGYHYG+LTCESCKGFFKRTVQ++K + C + +C +D++ RKRC CRF
Sbjct: 241 EICPICGDQVSGYHYGVLTCESCKGFFKRTVQDRKHFRCALQANCRVDQSFRKRCKSCRF 300
Query: 188 QKCLEVGMKLE 198
QK L +GMK+E
Sbjct: 301 QKGLMMGMKME 311
>gi|195169473|ref|XP_002025546.1| GL15259 [Drosophila persimilis]
gi|194109025|gb|EDW31068.1| GL15259 [Drosophila persimilis]
Length = 960
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 300 PHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITK 359
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CRF+KC+E GM L+
Sbjct: 360 AQRNRCQYCRFKKCIEQGMVLQA 382
>gi|242013448|ref|XP_002427418.1| Ecdysone receptor, putative [Pediculus humanus corporis]
gi|212511798|gb|EEB14680.1| Ecdysone receptor, putative [Pediculus humanus corporis]
Length = 796
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%)
Query: 108 FHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCV 167
F + ATP ++ I CP+C DK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+
Sbjct: 390 FSQHSALATPPGISRQQLINSPCPICSDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCL 449
Query: 168 AERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C + RK+CP CRF+KCL++GMKLE
Sbjct: 450 RGSQCPVTIATRKKCPACRFEKCLKMGMKLEA 481
>gi|307182462|gb|EFN69697.1| Hormone receptor 4 [Camponotus floridanus]
Length = 873
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 56/70 (80%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVAE C I K QR RC +CRF+
Sbjct: 402 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVAEGGCEITKAQRNRCQYCRFK 461
Query: 189 KCLEVGMKLE 198
KC+E GM L+
Sbjct: 462 KCIEQGMVLQ 471
>gi|350424400|ref|XP_003493783.1| PREDICTED: hormone receptor 4-like [Bombus impatiens]
Length = 976
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 56/70 (80%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVAE C I K QR RC +CRF+
Sbjct: 502 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVAEGGCEITKAQRNRCQYCRFK 561
Query: 189 KCLEVGMKLE 198
KC+E GM L+
Sbjct: 562 KCIEQGMVLQ 571
>gi|340728067|ref|XP_003402353.1| PREDICTED: hormone receptor 4-like [Bombus terrestris]
Length = 982
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 56/70 (80%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVAE C I K QR RC +CRF+
Sbjct: 508 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVAEGGCEITKAQRNRCQYCRFK 567
Query: 189 KCLEVGMKLE 198
KC+E GM L+
Sbjct: 568 KCIEQGMVLQ 577
>gi|47220030|emb|CAG12178.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 63/99 (63%), Gaps = 26/99 (26%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCK--------------------------GFFKRTVQN 160
EE CP+CGDKVSGYHYGLLTCESCK GFFKR+VQN
Sbjct: 1 EESCPICGDKVSGYHYGLLTCESCKVKGLKSQSKKQSFTVSCRVTVGVTLQGFFKRSVQN 60
Query: 161 KKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
K YTC +++C ++ +QRKRCPFCRFQKCL VGM+ E
Sbjct: 61 NKNYTCAEQQNCPMNLSQRKRCPFCRFQKCLAVGMRKEA 99
>gi|350399957|ref|XP_003485692.1| PREDICTED: nuclear hormone receptor FTZ-F1 beta-like, partial
[Bombus impatiens]
Length = 970
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ C + RK+CP C
Sbjct: 520 INTPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVVTRKKCPAC 579
Query: 186 RFQKCLEVGMKLEV 199
RF+KCL +GMKLE
Sbjct: 580 RFEKCLSMGMKLEA 593
>gi|332031633|gb|EGI71104.1| Hormone receptor 4 [Acromyrmex echinatior]
Length = 902
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 56/70 (80%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVAE C I K QR RC +CRF+
Sbjct: 509 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVAEGGCEITKAQRNRCQYCRFK 568
Query: 189 KCLEVGMKLE 198
KC+E GM L+
Sbjct: 569 KCIEQGMVLQ 578
>gi|307189891|gb|EFN74135.1| Nuclear hormone receptor FTZ-F1 beta [Camponotus floridanus]
Length = 982
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 75/131 (57%), Gaps = 22/131 (16%)
Query: 91 GGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEEL--------------------- 129
G ++ +S+ ++ H + +S++ + PD +E+
Sbjct: 459 GSPLHLPTASSAVAAHHYSSSSVPGSELSPDGHAVVEDQEDCRIPSAPSGISTRQQLINS 518
Query: 130 -CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ +C + RK+CP CRF
Sbjct: 519 PCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFD 578
Query: 189 KCLEVGMKLEV 199
KCL +GMKLE
Sbjct: 579 KCLNMGMKLEA 589
>gi|158288202|ref|XP_310077.4| AGAP009400-PA [Anopheles gambiae str. PEST]
gi|157019266|gb|EAA05800.4| AGAP009400-PA [Anopheles gambiae str. PEST]
Length = 858
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ +C + RK+CP C
Sbjct: 392 INSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTIATRKKCPAC 451
Query: 186 RFQKCLEVGMKLEV 199
RF+KCL+ GMKLE
Sbjct: 452 RFEKCLQKGMKLEA 465
>gi|322785822|gb|EFZ12441.1| hypothetical protein SINV_04282 [Solenopsis invicta]
Length = 999
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ C + RK+CP C
Sbjct: 535 INSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPAC 594
Query: 186 RFQKCLEVGMKLEV 199
RF+KCL +GMKLE
Sbjct: 595 RFEKCLNMGMKLEA 608
>gi|380016940|ref|XP_003692425.1| PREDICTED: nuclear hormone receptor FTZ-F1 beta-like [Apis florea]
Length = 979
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 67/112 (59%), Gaps = 9/112 (8%)
Query: 88 SPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
SP G +T D I P ST ++ I CP+CGDK+SG+HYG+ +C
Sbjct: 500 SPEGHATTDDQEDCRIPSAPSGIST---------RQQLINSPCPICGDKISGFHYGIFSC 550
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
ESCKGFFKRTVQN+K Y C+ C + RK+CP CRF KCL +GMKLE
Sbjct: 551 ESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEA 602
>gi|380013916|ref|XP_003690990.1| PREDICTED: hormone receptor 4-like [Apis florea]
Length = 893
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 56/70 (80%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVAE C I K QR RC +CRF+
Sbjct: 477 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVAEGGCEITKAQRNRCQYCRFK 536
Query: 189 KCLEVGMKLE 198
KC+E GM L+
Sbjct: 537 KCIEQGMVLQ 546
>gi|383850082|ref|XP_003700646.1| PREDICTED: nuclear hormone receptor FTZ-F1 beta-like [Megachile
rotundata]
Length = 981
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 55/74 (74%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ C + RK+CP C
Sbjct: 531 INSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPAC 590
Query: 186 RFQKCLEVGMKLEV 199
RF KCL +GMKLE
Sbjct: 591 RFDKCLNMGMKLEA 604
>gi|156556071|emb|CAO79105.1| hormone receptor-like in 4 [Aedes aegypti]
gi|403182746|gb|EAT42641.2| AAEL005850-PA [Aedes aegypti]
Length = 1263
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 57/71 (80%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K QR RC +CRF+
Sbjct: 830 VCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITKAQRNRCQYCRFK 889
Query: 189 KCLEVGMKLEV 199
KC+E GM L+
Sbjct: 890 KCIEQGMVLQA 900
>gi|291226180|ref|XP_002733072.1| PREDICTED: steroid hormone receptor 3-like [Saccoglossus
kowalevskii]
Length = 648
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 55/70 (78%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +C DK +G HYG++TCE CKGFFKRTVQNK+VY+CV E +C I K QR RC FCRFQK
Sbjct: 248 CSICQDKATGLHYGIITCEGCKGFFKRTVQNKRVYSCVGEGNCEITKAQRNRCQFCRFQK 307
Query: 190 CLEVGMKLEV 199
CL+ GM LE
Sbjct: 308 CLQKGMLLEA 317
>gi|402896452|ref|XP_003911313.1| PREDICTED: steroidogenic factor 1 [Papio anubis]
Length = 467
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 58/77 (75%), Gaps = 7/77 (9%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKR-------TVQNKKVYTCVAERSCHIDKTQRKRC 182
C +CGD+ +G HYG+++CE CKGFFKR TVQN K YTC +SC IDKTQRKRC
Sbjct: 12 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRRTVQNNKHYTCTESQSCKIDKTQRKRC 71
Query: 183 PFCRFQKCLEVGMKLEV 199
PFCRFQKCL VGM+LE
Sbjct: 72 PFCRFQKCLTVGMRLEA 88
>gi|328792058|ref|XP_396918.4| PREDICTED: nuclear hormone receptor FTZ-F1 beta [Apis mellifera]
Length = 976
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 55/74 (74%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ C + RK+CP C
Sbjct: 528 INSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPAC 587
Query: 186 RFQKCLEVGMKLEV 199
RF KCL +GMKLE
Sbjct: 588 RFDKCLNMGMKLEA 601
>gi|332025151|gb|EGI65331.1| Nuclear hormone receptor FTZ-F1 beta [Acromyrmex echinatior]
Length = 994
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 55/74 (74%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ C + RK+CP C
Sbjct: 530 INSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPAC 589
Query: 186 RFQKCLEVGMKLEV 199
RF KCL +GMKLE
Sbjct: 590 RFDKCLNMGMKLEA 603
>gi|410591545|gb|AFV74664.1| estradiol receptor-like protein 2, partial [Portunus
trituberculatus]
Length = 235
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 72/127 (56%), Gaps = 12/127 (9%)
Query: 83 SYLFQSPGGGSTNMDLSSAGISYHPF----------HTSTIAATPEHPDTKEGIEELCPV 132
S L +P + N +S IS PF TS P HP + G + LC +
Sbjct: 75 SLLSPAPSFSNANGGPASPSISTSPFTIGSSNTTGLSTSPTQYPPSHPLS--GSKHLCSI 132
Query: 133 CGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLE 192
CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ERSC IDK QR RC +CR+QKCL
Sbjct: 133 CGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQRNRCQYCRYQKCLS 192
Query: 193 VGMKLEV 199
+GMK E
Sbjct: 193 MGMKREA 199
>gi|391337775|ref|XP_003743240.1| PREDICTED: uncharacterized protein LOC100901258 [Metaseiulus
occidentalis]
Length = 939
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 56/70 (80%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
CP+CGD++SG+HYG+ +CESCKGFFKRTVQNKK Y C+ +C + RK+CP CRF K
Sbjct: 443 CPICGDRISGFHYGIFSCESCKGFFKRTVQNKKHYVCLRGGNCAVQVATRKKCPACRFDK 502
Query: 190 CLEVGMKLEV 199
CL++GMKLE
Sbjct: 503 CLKMGMKLEA 512
>gi|118343914|ref|NP_001071779.1| nuclear receptor [Ciona intestinalis]
gi|70570405|dbj|BAE06594.1| nuclear receptor [Ciona intestinalis]
Length = 1054
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 64/118 (54%), Gaps = 18/118 (15%)
Query: 100 SAGISYHPFHTSTIAATPEHP------------------DTKEGIEELCPVCGDKVSGYH 141
S G +HPF T HP + + E LC VCGD + H
Sbjct: 667 STGNHFHPFRTQYAGTERHHPYQSHNERLVVGGSMTPSTNVRPSSEGLCAVCGDNAACQH 726
Query: 142 YGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
YG+ TCE CKGFFKRTVQ K Y C+A R+C +DK +R RC FCRF+KCL VGM EV
Sbjct: 727 YGVRTCEGCKGFFKRTVQKKSTYVCLANRNCPVDKRRRNRCQFCRFEKCLAVGMVKEV 784
>gi|300915733|gb|ADK46871.1| nuclear hormone receptor FTZ-F1 beta, partial [Gryllus firmus]
Length = 401
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ SC + RK+CP CRF+K
Sbjct: 1 CPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGSSCPVTIATRKKCPACRFEK 60
Query: 190 CLEVGMKLE-VSSQSTHG 206
CL++GMKLE + T G
Sbjct: 61 CLKMGMKLEAIREDRTRG 78
>gi|195984199|gb|ACG63788.1| retinoid X receptor splice variant RXR-II [Carcinus maenas]
Length = 441
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 72/126 (57%), Gaps = 12/126 (9%)
Query: 83 SYLFQSPGGGSTNMDLSSAGISYHPF----------HTSTIAATPEHPDTKEGIEELCPV 132
S L +P + N +S IS PF TS P HP + G + LC +
Sbjct: 19 SLLSPAPAFSNANGGPASPSISTSPFTIGSSNTSGLSTSPTQYPPSHPLS--GSKHLCSI 76
Query: 133 CGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLE 192
CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ERSC IDK QR RC +CR+QKCL
Sbjct: 77 CGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQRNRCQYCRYQKCLS 136
Query: 193 VGMKLE 198
+GMK E
Sbjct: 137 MGMKRE 142
>gi|195984197|gb|ACG63787.1| retinoid X receptor splice variant RXR-I [Carcinus maenas]
Length = 402
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 72/126 (57%), Gaps = 12/126 (9%)
Query: 83 SYLFQSPGGGSTNMDLSSAGISYHPF----------HTSTIAATPEHPDTKEGIEELCPV 132
S L +P + N +S IS PF TS P HP + G + LC +
Sbjct: 19 SLLSPAPAFSNANGGPASPSISTSPFTIGSSNTSGLSTSPTQYPPSHPLS--GSKHLCSI 76
Query: 133 CGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLE 192
CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ERSC IDK QR RC +CR+QKCL
Sbjct: 77 CGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQRNRCQYCRYQKCLS 136
Query: 193 VGMKLE 198
+GMK E
Sbjct: 137 MGMKRE 142
>gi|68534984|ref|NP_001020384.1| steroid hormone receptor 3 [Strongylocentrotus purpuratus]
gi|64330537|gb|AAY41406.1| steroid hormone receptor 3 [Strongylocentrotus purpuratus]
Length = 715
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 54/71 (76%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
LC +C DK +G HYG++TCE CKGFFKRTVQNK+VYTCV C + K QR RC +CRFQ
Sbjct: 270 LCSICCDKATGLHYGIITCEGCKGFFKRTVQNKRVYTCVGNGQCEVTKAQRNRCQYCRFQ 329
Query: 189 KCLEVGMKLEV 199
KCL +GM LE
Sbjct: 330 KCLHMGMMLEA 340
>gi|241846413|ref|XP_002415570.1| zinc finger, C4 type, putative [Ixodes scapularis]
gi|215509782|gb|EEC19235.1| zinc finger, C4 type, putative [Ixodes scapularis]
Length = 515
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 71/119 (59%), Gaps = 20/119 (16%)
Query: 97 DLSSAGISYHPFHTSTIAATPEH-----------PDTKEGIEE-------LCPVCGDKVS 138
D SSAG++ P A+ P+ P T G E +C +C DK +
Sbjct: 57 DSSSAGVADPPAWEK--ASVPDSQALNLCVAGLAPSTSRGGAEDEDEQPMVCMICEDKAT 114
Query: 139 GYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKL 197
G HYG++TCE CKGFFKRTVQNK+VYTCVA+ +C I K QR RC +CRFQKCL GM L
Sbjct: 115 GLHYGIITCEGCKGFFKRTVQNKRVYTCVADGNCEITKAQRNRCQYCRFQKCLRQGMVL 173
>gi|270009223|gb|EFA05671.1| hormone receptor in 39-like protein [Tribolium castaneum]
Length = 719
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ +C + RK+CP C
Sbjct: 317 INSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPAC 376
Query: 186 RFQKCLEVGMKLEV 199
RF KCL+ GMKLE
Sbjct: 377 RFDKCLQCGMKLEA 390
>gi|427781555|gb|JAA56229.1| Putative hormone receptor-like in 39 [Rhipicephalus pulchellus]
Length = 777
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
CP+CGD++SG+HYG+ +CESCKGFFKRTVQNKK Y C+ +C + RK+CP CRF K
Sbjct: 366 CPICGDRISGFHYGIFSCESCKGFFKRTVQNKKHYVCLRGAACPVAVATRKKCPACRFDK 425
Query: 190 CLEVGMKLEV 199
CL GMKLE
Sbjct: 426 CLRTGMKLEA 435
>gi|112983222|ref|NP_001037015.1| nuclear receptor GRF [Bombyx mori]
gi|5059065|gb|AAD38900.1|AF124981_1 nuclear receptor GRF [Bombyx mori]
Length = 739
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 62/82 (75%), Gaps = 3/82 (3%)
Query: 120 PDTKEGIEE---LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P+T+ +E +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ C I K
Sbjct: 325 PETERDEDEQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGGCEITK 384
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CRF+KC+E GM L+
Sbjct: 385 AQRNRCQYCRFKKCIEQGMVLQ 406
>gi|354486366|ref|XP_003505352.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional regulator
ATRX-like, partial [Cricetulus griseus]
Length = 2726
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 57/75 (76%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +E+LCPVCGDKVS YHYGLLTC S K F + + K YTC+ ++C IDKTQRK P
Sbjct: 65 EDLEDLCPVCGDKVSRYHYGLLTCGSYKDFLSKQFKTIKKYTCIENQNCQIDKTQRKSSP 124
Query: 184 FCRFQKCLEVGMKLE 198
+C+FQKCL VGMKLE
Sbjct: 125 YCQFQKCLSVGMKLE 139
>gi|17979668|gb|AAL50350.1| hormone receptor 4 [Manduca sexta]
Length = 743
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 62/82 (75%), Gaps = 3/82 (3%)
Query: 120 PDTKEGIEE---LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P+T+ +E +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ C I K
Sbjct: 329 PETERDEDEQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGGCEITK 388
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CRF+KC+E GM L+
Sbjct: 389 AQRNRCQYCRFKKCIEQGMVLQ 410
>gi|389614487|dbj|BAM20291.1| hormone receptor 4, partial [Papilio xuthus]
Length = 595
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 62/82 (75%), Gaps = 3/82 (3%)
Query: 120 PDTKEGIEE---LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P+T+ +E +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ C I K
Sbjct: 206 PETERDEDEQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGGCEITK 265
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CRF+KC+E GM L+
Sbjct: 266 AQRNRCQYCRFKKCIEQGMVLQ 287
>gi|189234563|ref|XP_974320.2| PREDICTED: similar to thr4 [Tribolium castaneum]
Length = 709
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 57/70 (81%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K QR RC +CRF+
Sbjct: 298 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGNCEITKAQRNRCQYCRFK 357
Query: 189 KCLEVGMKLE 198
KC+E GM L+
Sbjct: 358 KCIEQGMVLQ 367
>gi|68342537|gb|AAC32789.3| retinoid X receptor homolog [Uca pugilator]
Length = 465
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 72/126 (57%), Gaps = 12/126 (9%)
Query: 83 SYLFQSPGGGSTNMDLSSAGISYHPF----------HTSTIAATPEHPDTKEGIEELCPV 132
S L +P + N +S IS PF TS P HP + G + LC +
Sbjct: 51 SLLSPAPSFSTANGGPASPSISTPPFTIGSSNTTGLSTSPSQYPPSHPLS--GSKHLCSI 108
Query: 133 CGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLE 192
CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ERSC IDK QR RC +CR+QKCL
Sbjct: 109 CGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQRNRCQYCRYQKCLT 168
Query: 193 VGMKLE 198
+GMK E
Sbjct: 169 MGMKRE 174
>gi|270002765|gb|EEZ99212.1| HR4 [Tribolium castaneum]
Length = 760
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 57/70 (81%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K QR RC +CRF+
Sbjct: 349 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGNCEITKAQRNRCQYCRFK 408
Query: 189 KCLEVGMKLE 198
KC+E GM L+
Sbjct: 409 KCIEQGMVLQ 418
>gi|21464746|gb|AAM54498.1|AF411258_1 hormone receptor 4 [Trichoplusia ni]
Length = 550
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 61/85 (71%)
Query: 114 AATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCH 173
A PE ++ +C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ C
Sbjct: 150 AYAPEAERDEDEQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGGCE 209
Query: 174 IDKTQRKRCPFCRFQKCLEVGMKLE 198
I K QR RC +CRF+KC+E GM L+
Sbjct: 210 ITKAQRNRCQYCRFKKCIEQGMVLQ 234
>gi|333690756|gb|AEF79806.1| HR4 nuclear receptor, partial [Blattella germanica]
Length = 729
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 57/70 (81%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K QR RC +CRF+
Sbjct: 318 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGNCEITKAQRNRCQYCRFK 377
Query: 189 KCLEVGMKLE 198
KC+E GM L+
Sbjct: 378 KCIEQGMVLQ 387
>gi|157169454|ref|XP_001651525.1| orphan nuclear receptor nr6a1 (germ cell nuclear factor) (gcnf)
[Aedes aegypti]
Length = 486
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 57/70 (81%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K QR RC +CRF+
Sbjct: 53 VCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITKAQRNRCQYCRFK 112
Query: 189 KCLEVGMKLE 198
KC+E GM L+
Sbjct: 113 KCIEQGMVLQ 122
>gi|427785707|gb|JAA58305.1| Putative retinoid x receptor alpha a [Rhipicephalus pulchellus]
Length = 433
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 91/184 (49%), Gaps = 11/184 (5%)
Query: 22 KKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNNTSASAGGAGYNFNNMV- 80
KK +PK + LL + G P Q +SP GGA ++ +
Sbjct: 3 KKERPKLSVTALLYGSAG---PAASWPTRPLQPPDVSPPGIRAAPGLNGGASNGVSSSLP 59
Query: 81 -DNSYLFQSPGGGSTNMD-LSSAGISYHPFHTSTIAAT---PEHPDTKEGIEELCPVCGD 135
S+L G S + L ++ P AAT P HP + G + LC +CGD
Sbjct: 60 PQPSFLLSGYGAPSASRPPLDGRQLNNGPPAAPQQAATRYPPNHPLS--GSKHLCSICGD 117
Query: 136 KVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK QR RC +CR+QKCL GM
Sbjct: 118 RASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCVIDKRQRNRCQYCRYQKCLSCGM 177
Query: 196 KLEV 199
K E
Sbjct: 178 KREA 181
>gi|158302672|dbj|BAF85823.1| ultraspiracle [Liocheles australasiae]
Length = 410
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 95/179 (53%), Gaps = 25/179 (13%)
Query: 22 KKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNNTSASAGGAGY-NFNNMV 80
KK +PK + LL ++N + SP+LG+ T++S G N +
Sbjct: 3 KKERPKLSVTALLCG-----------NHNSPTNWTTSPVLGHYTASSLGPTSLSNEGATL 51
Query: 81 DNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGY 140
S Q G+ N L+ +G ++P P HP + G + LC +CGD+ SG
Sbjct: 52 VTSSQTQPQFTGNHNSFLTPSG--HYP---------PNHPLS--GSKHLCAICGDRASGK 98
Query: 141 HYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
HYG+ +CE CKGFFKRTV+ Y C ER+C IDK QR RC +CR+QKCL +GMK E
Sbjct: 99 HYGVYSCEGCKGFFKRTVRKDLTYACREERTCTIDKRQRNRCQYCRYQKCLMMGMKREA 157
>gi|426226181|ref|XP_004007227.1| PREDICTED: LOW QUALITY PROTEIN: steroidogenic factor 1 [Ovis aries]
Length = 443
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 56/76 (73%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSG +GFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGXXXXXXXXXXXQGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLEA 82
>gi|405977427|gb|EKC41882.1| hypothetical protein CGI_10012788 [Crassostrea gigas]
Length = 1295
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 111 STIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 170
+TI+ ++ + EG + CPVCGD VSGYHYG+ TCESCKGFFKRTVQN K +TC
Sbjct: 891 TTISQMDDNSMSNEGYQP-CPVCGDNVSGYHYGIFTCESCKGFFKRTVQNNKTFTCHRNG 949
Query: 171 SCHIDKTQRKRCPFCRFQKCLEVGMK 196
C I + RK+CP CRF KC+ +GMK
Sbjct: 950 DCEISRGNRKKCPSCRFAKCVLMGMK 975
>gi|328717077|ref|XP_003246113.1| PREDICTED: nuclear hormone receptor FTZ-F1 beta-like isoform 2
[Acyrthosiphon pisum]
Length = 693
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 54/69 (78%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN K Y C+ +C I RK+CP CRF K
Sbjct: 333 CPICGDKISGFHYGIFSCESCKGFFKRTVQNHKNYVCLHGSACLITIATRKKCPACRFDK 392
Query: 190 CLEVGMKLE 198
CL +GMKLE
Sbjct: 393 CLNMGMKLE 401
>gi|328717075|ref|XP_001947027.2| PREDICTED: nuclear hormone receptor FTZ-F1 beta-like isoform 1
[Acyrthosiphon pisum]
Length = 712
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 54/70 (77%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN K Y C+ +C I RK+CP CRF K
Sbjct: 333 CPICGDKISGFHYGIFSCESCKGFFKRTVQNHKNYVCLHGSACLITIATRKKCPACRFDK 392
Query: 190 CLEVGMKLEV 199
CL +GMKLE
Sbjct: 393 CLNMGMKLEA 402
>gi|324507366|gb|ADY43127.1| Nuclear hormone receptor family member nhr-91 [Ascaris suum]
Length = 658
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA-ERSCHIDKTQRKRCPFCRF 187
LC +CGDK SG HYG+ TCE CKGFFKRTVQNK+VYTCV+ SC + K QR RC +CRF
Sbjct: 203 LCSICGDKSSGLHYGIYTCEGCKGFFKRTVQNKRVYTCVSGTASCPMTKEQRNRCQYCRF 262
Query: 188 QKCLEVGMKLE 198
QKCL+ GM LE
Sbjct: 263 QKCLQQGMVLE 273
>gi|393395464|gb|AFN08662.1| retinoid X receptor 2 [Scylla paramamosain]
Length = 236
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 72/127 (56%), Gaps = 12/127 (9%)
Query: 83 SYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAAT----------PEHPDTKEGIEELCPV 132
S L +P + N +S IS PF + T P HP + G + LC +
Sbjct: 19 SLLSPAPSFSNANGGPASPSISTSPFTIGSSNTTSLSTSPTQYPPSHPLS--GSKHLCSI 76
Query: 133 CGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLE 192
CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ERSC IDK QR RC +CR+QKCL
Sbjct: 77 CGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQRNRCQYCRYQKCLS 136
Query: 193 VGMKLEV 199
+GMK E
Sbjct: 137 MGMKREA 143
>gi|328710695|ref|XP_001945726.2| PREDICTED: hormone receptor 4-like isoform 1 [Acyrthosiphon pisum]
Length = 956
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 56/70 (80%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C D+ +G HYG++TCE CKGFFKRTVQN+++YTC+AE +C I K QR RC +CRF+
Sbjct: 534 VCMICDDRATGLHYGIITCEGCKGFFKRTVQNRRIYTCIAEGTCEITKAQRNRCQYCRFK 593
Query: 189 KCLEVGMKLE 198
KC+ GM L+
Sbjct: 594 KCIGQGMVLQ 603
>gi|328710693|ref|XP_003244335.1| PREDICTED: hormone receptor 4-like isoform 2 [Acyrthosiphon pisum]
Length = 936
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 56/70 (80%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +C D+ +G HYG++TCE CKGFFKRTVQN+++YTC+AE +C I K QR RC +CRF+
Sbjct: 514 VCMICDDRATGLHYGIITCEGCKGFFKRTVQNRRIYTCIAEGTCEITKAQRNRCQYCRFK 573
Query: 189 KCLEVGMKLE 198
KC+ GM L+
Sbjct: 574 KCIGQGMVLQ 583
>gi|357620516|gb|EHJ72674.1| hormone receptor 39 [Danaus plexippus]
Length = 677
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 55/74 (74%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ +C + RK+CP C
Sbjct: 346 INSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPAC 405
Query: 186 RFQKCLEVGMKLEV 199
RF KCL GMKLE
Sbjct: 406 RFDKCLGCGMKLEA 419
>gi|195447730|ref|XP_002071344.1| GK25746 [Drosophila willistoni]
gi|194167429|gb|EDW82330.1| GK25746 [Drosophila willistoni]
Length = 483
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 81/155 (52%), Gaps = 26/155 (16%)
Query: 50 NDTQSSQLSPMLGNNTSASAGGAGYNFNNMV-----DNSYLFQSPGGGSTNMDLSSAGIS 104
ND+ +S SP + S G G MV DN + Q+P N SSA
Sbjct: 27 NDSNNSSFSP-----KAESPGPFGLQSMTMVHVLPNDNQMVAQAP-----NASASSATPQ 76
Query: 105 YHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
+P P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 77 QYP---------PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTY 125
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C R+C IDK QR RC +CR+QKCL GMK E
Sbjct: 126 ACRENRNCIIDKRQRNRCQYCRYQKCLSCGMKREA 160
>gi|3834346|dbj|BAA34123.1| hormone receptor 39 [Bombyx mori]
Length = 594
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 55/74 (74%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ +C + RK+CP C
Sbjct: 204 INSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPAC 263
Query: 186 RFQKCLEVGMKLEV 199
RF KCL GMKLE
Sbjct: 264 RFDKCLGCGMKLEA 277
>gi|355845815|gb|AET06182.1| retinoid-X receptor [Callinectes sapidus]
Length = 399
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 72/126 (57%), Gaps = 12/126 (9%)
Query: 83 SYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAAT----------PEHPDTKEGIEELCPV 132
S L +P + N +S IS PF + T P HP + G + LC +
Sbjct: 19 SLLSPAPSFSNANGGPASPSISTSPFTIGSSNTTSLSTSPTQYPPSHPLS--GSKHLCSI 76
Query: 133 CGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLE 192
CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ERSC IDK QR RC +CR+QKCL
Sbjct: 77 CGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQRNRCQYCRYQKCLS 136
Query: 193 VGMKLE 198
+GMK E
Sbjct: 137 MGMKRE 142
>gi|226479264|emb|CAX73127.1| nuclear receptor subfamily 5, group A, member 2 [Schistosoma
japonicum]
Length = 956
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTC---VAERSCHIDKTQRKRCPFCR 186
CP+CGDK+SGYHYG+ CESCKGFFKRTVQN K Y C A C I+ RK+CP CR
Sbjct: 379 CPICGDKISGYHYGIFCCESCKGFFKRTVQNAKRYACHRPNASSRCEINVASRKKCPACR 438
Query: 187 FQKCLEVGMKLE-VSSQSTHG 206
F KC++ GM++E + S T G
Sbjct: 439 FLKCVDKGMRIEAIRSDRTRG 459
>gi|327176811|gb|AEA29832.1| retinoid X receptor splice variant [Homarus americanus]
Length = 410
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +RSC IDK
Sbjct: 71 PSHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRSCTIDK 128
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC FCR+QKCL +GMK E
Sbjct: 129 RQRNRCQFCRYQKCLSMGMKRE 150
>gi|242008309|ref|XP_002424949.1| retinoid X receptor, putative [Pediculus humanus corporis]
gi|212508563|gb|EEB12211.1| retinoid X receptor, putative [Pediculus humanus corporis]
Length = 420
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 92/190 (48%), Gaps = 34/190 (17%)
Query: 22 KKLKPKTPIQQLLSAATGAQTPQMQH-SNNDTQSSQLSPMLGNNTSASAGGAGYNFNNMV 80
KK KP +LS A Q Q+QH S T L S GG +
Sbjct: 3 KKDKP------MLSVAAIIQGVQVQHWSRGKTNVMML-------LSVELGGPQSPLDMKP 49
Query: 81 DNSYLFQ---SPGGGSTNMDLSSAGISYHPFHTSTIAAT---------PEHPDTKEGIEE 128
D + L SP GG + + + G H+S I P HP + G +
Sbjct: 50 DTATLLGGNFSPNGGPNSPNSFTMG------HSSLIGNNSNNKMASYPPNHPLS--GSKH 101
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK QR RC FCR+
Sbjct: 102 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDKRQRNRCQFCRYN 161
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 162 KCLAMGMKRE 171
>gi|383848789|ref|XP_003700030.1| PREDICTED: retinoic acid receptor RXR-alpha-A-like [Megachile
rotundata]
Length = 427
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 94/187 (50%), Gaps = 21/187 (11%)
Query: 22 KKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNNTSASAGGAGYNFNNMVD 81
KK +P T + ++ Q Q QH + L +N S S+ G + D
Sbjct: 3 KKERPMTSVTAII------QGTQAQHWSRGNTWLSLD---NSNMSMSSVGPQSPLDMKPD 53
Query: 82 NSYLFQ----SPGG----GSTNMDLSSAGISYHPFHTSTIAAT--PEHPDTKEGIEELCP 131
+ L SP G GS N S +S P + A P HP + G + LC
Sbjct: 54 TASLINAGNFSPSGPNSPGSFNAGCHSNLLSTSPSGQNKAVAPYPPNHPLS--GSKHLCS 111
Query: 132 VCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCL 191
+CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E+SC IDK QR RC +CR+QKCL
Sbjct: 112 ICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRNRCQYCRYQKCL 171
Query: 192 EVGMKLE 198
+GMK E
Sbjct: 172 AMGMKRE 178
>gi|351697568|gb|EHB00487.1| Nuclear receptor subfamily 4 group A member 1 [Heterocephalus
glaber]
Length = 598
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 92/195 (47%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K L P+ P S TG P + S+ SQ + LG
Sbjct: 191 SQTYEGLRAWTEQLPKASGL-PQPPAFFSFSPPTGP-GPSLAQSSLKLYPSQATHQLGEG 248
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ +L S+G+ P +A P
Sbjct: 249 ESYSMPAA---------------FPGLAPTSPNLDSSGMLDPP----VTSAKPRS-AVPS 288
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 289 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQF 348
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 349 CRFQKCLAVGMVKEV 363
>gi|256083730|ref|XP_002578092.1| FTZ-F1 nuclear receptor-like protein [Schistosoma mansoni]
Length = 892
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTC---VAERSCHIDKTQRKRCPFCR 186
CP+CGDK+SGYHYG+ CESCKGFFKRTVQN K Y C A C I+ RK+CP CR
Sbjct: 386 CPICGDKISGYHYGIFCCESCKGFFKRTVQNAKRYACHRPNASSRCEINVASRKKCPACR 445
Query: 187 FQKCLEVGMKLE-VSSQSTHG 206
F KC++ GM++E + S T G
Sbjct: 446 FLKCVDKGMRIEAIRSDRTRG 466
>gi|12239372|gb|AAG49449.1|AF158103_1 FTZ-F1 [Schistosoma mansoni]
gi|19421733|gb|AAL86621.1| FTZ-F1 nuclear receptor-like protein [Schistosoma mansoni]
Length = 731
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTC---VAERSCHIDKTQRKRCPFCR 186
CP+CGDK+SGYHYG+ CESCKGFFKRTVQN K Y C A C I+ RK+CP CR
Sbjct: 153 CPICGDKISGYHYGIFCCESCKGFFKRTVQNAKRYACHRPNASSRCEINVASRKKCPACR 212
Query: 187 FQKCLEVGMKLE-VSSQSTHG 206
F KC++ GM++E + S T G
Sbjct: 213 FLKCVDKGMRIEAIRSDRTRG 233
>gi|353231262|emb|CCD77680.1| FTZ-F1 nuclear receptor-like protein [Schistosoma mansoni]
Length = 784
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTC---VAERSCHIDKTQRKRCPFCR 186
CP+CGDK+SGYHYG+ CESCKGFFKRTVQN K Y C A C I+ RK+CP CR
Sbjct: 381 CPICGDKISGYHYGIFCCESCKGFFKRTVQNAKRYACHRPNASSRCEINVASRKKCPACR 440
Query: 187 FQKCLEVGMKLE-VSSQSTHG 206
F KC++ GM++E + S T G
Sbjct: 441 FLKCVDKGMRIEAIRSDRTRG 461
>gi|301626790|ref|XP_002942574.1| PREDICTED: nuclear receptor subfamily 4 group A member 3-like,
partial [Xenopus (Silurana) tropicalis]
Length = 517
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 86 FQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLL 145
+ P +N+ SS G S H S P P K E C VCGD + HYG+
Sbjct: 214 YNLPITKGSNLIFSSLG-STHNVAVSGDGNLPSPPIRKTAGEGTCAVCGDNAACQHYGVR 272
Query: 146 TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TCE CKGFFKRTVQ K Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 273 TCEGCKGFFKRTVQKKAKYVCLANKNCPVDKRRRNRCQYCRFQKCLNVGMVKEV 326
>gi|443691595|gb|ELT93409.1| hypothetical protein CAPTEDRAFT_164614 [Capitella teleta]
Length = 540
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 70/120 (58%), Gaps = 8/120 (6%)
Query: 88 SPGG-GSTNMDLSSAGISYHPFH--TSTIAATPEHPDTKEG-----IEELCPVCGDKVSG 139
SPG S+ L+S G S P TST+ HP G + +C +CGD+ SG
Sbjct: 171 SPGSIQSSGSSLTSPGTSLTPLQSPTSTMGPPNIHPGMMGGSGVMTTKHICAICGDRASG 230
Query: 140 YHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
HYG+ +CE CKGFFKRTV+ Y C E+SC IDK QR RC FCR+ KCL +GMK E
Sbjct: 231 KHYGVHSCEGCKGFFKRTVRKDLQYACRDEKSCLIDKRQRNRCQFCRYMKCLSMGMKREA 290
>gi|314955556|gb|ADT64885.1| retinoid X receptor [Gryllus firmus]
Length = 403
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 110 TSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
+S+I P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E
Sbjct: 62 SSSIQYPPNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELSYACREE 119
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
++C IDK QR RC +CR+QKCL +GMK E
Sbjct: 120 KNCIIDKRQRNRCQYCRYQKCLTMGMKRE 148
>gi|314955486|gb|ADT64884.1| retinoid X receptor [Gryllus firmus]
Length = 403
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 110 TSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
+S+I P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E
Sbjct: 62 SSSIQYPPNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELSYACREE 119
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
++C IDK QR RC +CR+QKCL +GMK E
Sbjct: 120 KNCIIDKRQRNRCQYCRYQKCLTMGMKRE 148
>gi|260802945|ref|XP_002596352.1| hypothetical protein BRAFLDRAFT_215541 [Branchiostoma floridae]
gi|229281607|gb|EEN52364.1| hypothetical protein BRAFLDRAFT_215541 [Branchiostoma floridae]
Length = 84
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 54/69 (78%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
CPVCGDK+SG+HYG+ +CESCKGFFKRT+QNKK Y C+A C + RKRCP CRF K
Sbjct: 1 CPVCGDKISGFHYGIFSCESCKGFFKRTIQNKKNYKCLAAAKCDVSLKTRKRCPACRFSK 60
Query: 190 CLEVGMKLE 198
CL GMKLE
Sbjct: 61 CLSKGMKLE 69
>gi|225001482|gb|ACN78601.1| retinoid X receptor 1 [Fenneropenaeus chinensis]
Length = 442
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER C IDK
Sbjct: 104 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERGCTIDK 161
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 162 RQRNRCQYCRYQKCLSMGMKRE 183
>gi|358342696|dbj|GAA50141.1| nuclear receptor subfamily 5 group A member 3 [Clonorchis sinensis]
Length = 1053
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 58/81 (71%), Gaps = 4/81 (4%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTC---VAERSCHIDKTQRKRCPFCR 186
CP+CGDK+SGYHYG+ CESCKGFFKRTVQN K Y C A C I+ + RK+CP CR
Sbjct: 491 CPICGDKISGYHYGIFCCESCKGFFKRTVQNAKRYACHHPSANSVCEINVSSRKKCPACR 550
Query: 187 FQKCLEVGMKLE-VSSQSTHG 206
F KC++ GM++E + S T G
Sbjct: 551 FLKCVDKGMRIEAIRSDRTRG 571
>gi|154936862|dbj|BAF75376.1| retinoid X receptor [Marsupenaeus japonicus]
Length = 442
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER C IDK
Sbjct: 104 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERGCTIDK 161
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 162 RQRNRCQYCRYQKCLSMGMKRE 183
>gi|391334318|ref|XP_003741552.1| PREDICTED: retinoic acid receptor RXR-alpha-like [Metaseiulus
occidentalis]
Length = 574
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + + LC +CGDK SG HYG+ +CE CKGFFKRTV+ Y C ER C IDK
Sbjct: 246 PNHPLSNS--KHLCSICGDKASGKHYGVFSCEGCKGFFKRTVRKDLTYACREERRCLIDK 303
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL+ GMK E
Sbjct: 304 RQRNRCQYCRYQKCLQCGMKRE 325
>gi|121308144|emb|CAL25729.1| ultraspiracle nuclear receptor [Tribolium castaneum]
Length = 407
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Query: 107 PFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTC 166
P +ST P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C
Sbjct: 65 PNKSSTSPYPPNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYAC 122
Query: 167 VAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
E++C IDK QR RC +CR+QKCL +GMK E
Sbjct: 123 REEKNCIIDKRQRNRCQYCRYQKCLNMGMKRE 154
>gi|225001484|gb|ACN78602.1| retinoid X receptor 2 [Fenneropenaeus chinensis]
Length = 437
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER C IDK
Sbjct: 104 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERGCTIDK 161
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 162 RQRNRCQYCRYQKCLSMGMKRE 183
>gi|282165797|ref|NP_001107766.2| ultraspiracle nuclear receptor [Tribolium castaneum]
gi|270008201|gb|EFA04649.1| ultraspiracle, partial [Tribolium castaneum]
Length = 407
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Query: 107 PFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTC 166
P +ST P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C
Sbjct: 65 PNKSSTSPYPPNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYAC 122
Query: 167 VAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
E++C IDK QR RC +CR+QKCL +GMK E
Sbjct: 123 REEKNCIIDKRQRNRCQYCRYQKCLNMGMKRE 154
>gi|302202572|gb|ADL09403.1| retinoid X receptor [Gryllus firmus]
Length = 403
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 110 TSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
+S+I P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E
Sbjct: 62 SSSIQYPPNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREE 119
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
++C IDK QR RC +CR+QKCL +GMK E
Sbjct: 120 KNCIIDKRQRNRCQYCRYQKCLTMGMKRE 148
>gi|388325219|gb|AFK27933.1| ultraspiracle [Spodoptera litura]
Length = 414
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 50 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDK 107
Query: 177 TQRKRCPFCRFQKCLEVGMKLEVSSQ 202
QR RC +CR+QKCL GMK E + +
Sbjct: 108 RQRNRCQYCRYQKCLACGMKREAAQE 133
>gi|170036586|ref|XP_001846144.1| nuclear hormone receptor [Culex quinquefasciatus]
gi|167879298|gb|EDS42681.1| nuclear hormone receptor [Culex quinquefasciatus]
Length = 707
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 57/87 (65%)
Query: 113 IAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
I P T + +LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C
Sbjct: 438 ITPAPPRGTTPQSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKAC 497
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLEV 199
+DK +R RC FCRFQKCL VGM EV
Sbjct: 498 PVDKRRRNRCQFCRFQKCLAVGMVKEV 524
>gi|156551053|ref|XP_001605819.1| PREDICTED: retinoic acid receptor RXR isoform 1 [Nasonia
vitripennis]
Length = 414
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 71/120 (59%), Gaps = 10/120 (8%)
Query: 88 SPGG----GSTNMDLSSAGISYHPFHTSTIAA----TPEHPDTKEGIEELCPVCGDKVSG 139
SP G GS N+ S I+ P + +A P HP + G + LC +CGD+ SG
Sbjct: 41 SPSGPNSPGSLNLGCPSNMITTSPGGQNKTSAGSPYPPNHPLS--GSKHLCSICGDRASG 98
Query: 140 YHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
HYG+ +CE CKGFFKRTV+ Y C E+ C IDK QR RC +CR+QKCL +GMK E
Sbjct: 99 KHYGVYSCEGCKGFFKRTVRKDLTYACREEKHCLIDKRQRNRCQYCRYQKCLTMGMKREA 158
>gi|340719093|ref|XP_003397991.1| PREDICTED: retinoic acid receptor RXR-alpha-A-like isoform 1
[Bombus terrestris]
gi|350396161|ref|XP_003484462.1| PREDICTED: retinoic acid receptor RXR-alpha-A-like isoform 1
[Bombus impatiens]
Length = 427
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E+SC IDK
Sbjct: 99 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDK 156
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 157 RQRNRCQYCRYQKCLAMGMKREA 179
>gi|451774918|gb|AGF50212.1| ultraspiracle protein [Polyrhachis vicina]
Length = 424
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E+SC IDK
Sbjct: 94 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDK 151
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 152 RQRNRCQYCRYQKCLAMGMKRE 173
>gi|357621270|gb|EHJ73160.1| ultraspiracle-like protein [Danaus plexippus]
Length = 423
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 105 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDK 162
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 163 RQRNRCQYCRYQKCLACGMKRE 184
>gi|58585210|ref|NP_001011634.1| ultraspiracle [Apis mellifera]
gi|8118613|gb|AAF73057.1|AF263459_1 ultraspiracle protein [Apis mellifera]
gi|30691980|gb|AAP33487.1| ultraspiracle protein [Apis mellifera]
Length = 427
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E+SC IDK
Sbjct: 99 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDK 156
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 157 RQRNRCQYCRYQKCLAMGMKRE 178
>gi|161769557|gb|ABX79144.1| ultraspiracle [Spodoptera litura]
gi|388325217|gb|AFK27932.1| Ecdysone receptor [Spodoptera litura]
Length = 467
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 103 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDK 160
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 161 RQRNRCQYCRYQKCLACGMKRE 182
>gi|59709818|gb|AAW88539.1| FTZ-F1-alpha [Schistosoma mansoni]
Length = 66
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
CP+CGDKVSGYHYGL TCESCKGFFKRTVQNKK Y C + +C +D+ RKRC +CRFQK
Sbjct: 1 CPICGDKVSGYHYGLPTCESCKGFFKRTVQNKKEYHCNEQGNCVVDRLHRKRCAYCRFQK 60
Query: 190 CLEVGM 195
CL VGM
Sbjct: 61 CLIVGM 66
>gi|56608614|gb|AAW02952.1| ultraspiracle [Melipona scutellaris]
Length = 427
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E+SC IDK
Sbjct: 99 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDK 156
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 157 RQRNRCQYCRYQKCLAMGMKRE 178
>gi|345489439|ref|XP_003426139.1| PREDICTED: retinoic acid receptor RXR [Nasonia vitripennis]
Length = 400
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 71/120 (59%), Gaps = 10/120 (8%)
Query: 88 SPGG----GSTNMDLSSAGISYHPFHTSTIAA----TPEHPDTKEGIEELCPVCGDKVSG 139
SP G GS N+ S I+ P + +A P HP + G + LC +CGD+ SG
Sbjct: 27 SPSGPNSPGSLNLGCPSNMITTSPGGQNKTSAGSPYPPNHPLS--GSKHLCSICGDRASG 84
Query: 140 YHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
HYG+ +CE CKGFFKRTV+ Y C E+ C IDK QR RC +CR+QKCL +GMK E
Sbjct: 85 KHYGVYSCEGCKGFFKRTVRKDLTYACREEKHCLIDKRQRNRCQYCRYQKCLTMGMKREA 144
>gi|341897373|gb|EGT53308.1| hypothetical protein CAEBREN_30153 [Caenorhabditis brenneri]
Length = 663
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 55/80 (68%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
PDT + ++LC VC D+ HYG TCE CKGFFKRTVQ + YTC ++C IDK R
Sbjct: 303 PDTLQDADKLCAVCSDRAVCLHYGARTCEGCKGFFKRTVQKQSKYTCAGNQNCPIDKRYR 362
Query: 180 KRCPFCRFQKCLEVGMKLEV 199
RC FCRFQKCL+VGM E+
Sbjct: 363 SRCQFCRFQKCLDVGMVKEI 382
>gi|71040958|gb|AAZ20370.1| RXRc nuclear hormone receptor [Gecarcinus lateralis]
Length = 363
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 55/79 (69%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
P G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ERSC IDK QR
Sbjct: 62 PTHLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQR 121
Query: 180 KRCPFCRFQKCLEVGMKLE 198
RC +CR+QKCL +GMK E
Sbjct: 122 NRCQYCRYQKCLTMGMKRE 140
>gi|340719095|ref|XP_003397992.1| PREDICTED: retinoic acid receptor RXR-alpha-A-like isoform 2
[Bombus terrestris]
gi|350396164|ref|XP_003484463.1| PREDICTED: retinoic acid receptor RXR-alpha-A-like isoform 2
[Bombus impatiens]
Length = 405
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E+SC IDK
Sbjct: 77 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDK 134
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 135 RQRNRCQYCRYQKCLAMGMKREA 157
>gi|281334019|gb|ADA61199.1| ultraspiracle protein [Plutella xylostella]
gi|347810676|gb|AEP25407.1| ultraspiracle protein [Plutella xylostella]
Length = 414
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 49 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDK 106
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 107 RQRNRCQYCRYQKCLACGMKREA 129
>gi|380012603|ref|XP_003690369.1| PREDICTED: retinoic acid receptor RXR-alpha-A-like [Apis florea]
Length = 440
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E+SC IDK
Sbjct: 112 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDK 169
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 170 RQRNRCQYCRYQKCLAMGMKRE 191
>gi|2895868|gb|AAC03056.1| ultraspiracle [Chironomus tentans]
Length = 552
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 186 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREERNCVIDK 243
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 244 KQRNRCQYCRYQKCLNCGMKRE 265
>gi|195387014|ref|XP_002052199.1| GJ17428 [Drosophila virilis]
gi|194148656|gb|EDW64354.1| GJ17428 [Drosophila virilis]
Length = 878
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 88/184 (47%), Gaps = 43/184 (23%)
Query: 25 KPKTPIQQLLSAATGAQTPQMQ---------HSNNDTQSSQLSPMLGNNTSASAGGAGYN 75
+ P+Q+ +S A A +P+M H+ N Q QLS + S+ GAG +
Sbjct: 456 RASLPVQRSVSPAAAAHSPKMAKLALGARNAHTVNALQV-QLSSAPNSAASSPVSGAGTD 514
Query: 76 FNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGD 135
F + L QS HP+ + LC VCGD
Sbjct: 515 FLHNQAQGRLLQS-----------------------------THPNASQ----LCAVCGD 541
Query: 136 KVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
+ HYG+ TCE CKGFFKRTVQ Y C+A++SC +DK +R RC FCRFQKCL VGM
Sbjct: 542 TAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKSCPVDKRRRNRCQFCRFQKCLVVGM 601
Query: 196 KLEV 199
EV
Sbjct: 602 VKEV 605
>gi|417347487|gb|AFX60116.1| nuclear receptor USP isoform 1 [Spodoptera frugiperda]
Length = 466
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 102 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDK 159
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 160 RQRNRCQYCRYQKCLACGMKRE 181
>gi|71040960|gb|AAZ20371.1| RXRd nuclear hormone receptor [Gecarcinus lateralis]
Length = 432
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 56/81 (69%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
P G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ERSC IDK QR
Sbjct: 62 PTHLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQR 121
Query: 180 KRCPFCRFQKCLEVGMKLEVS 200
RC +CR+QKCL +GMK E +
Sbjct: 122 NRCQYCRYQKCLTMGMKREAA 142
>gi|349803785|gb|AEQ17365.1| putative nuclear receptor subfamily group member 2 [Hymenochirus
curtipes]
Length = 194
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 54/63 (85%), Gaps = 2/63 (3%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ +EE+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKT ++ P
Sbjct: 2 DDLEEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKT--RKVP 59
Query: 184 FCR 186
+CR
Sbjct: 60 YCR 62
>gi|71040964|gb|AAZ20373.1| RXRf nuclear hormone receptor [Gecarcinus lateralis]
Length = 201
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 54/75 (72%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ERSC IDK QR RC +
Sbjct: 67 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQRNRCQY 126
Query: 185 CRFQKCLEVGMKLEV 199
CR+QKCL +GMK E
Sbjct: 127 CRYQKCLTMGMKREA 141
>gi|18202151|sp|O76202.1|USP_CHOFU RecName: Full=Protein ultraspiracle homolog; AltName: Full=Nuclear
receptor subfamily 2 group B member 4
gi|3420010|gb|AAC31795.1| Ultraspiracle [Choristoneura fumiferana]
Length = 472
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 108 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREERNCIIDK 165
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 166 RQRNRCQYCRYQKCLACGMKREA 188
>gi|195119101|ref|XP_002004070.1| GI19631 [Drosophila mojavensis]
gi|193914645|gb|EDW13512.1| GI19631 [Drosophila mojavensis]
Length = 981
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A++SC +DK +R RC FCRF
Sbjct: 637 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKSCPVDKRRRNRCQFCRF 696
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 697 QKCLVVGMVKEV 708
>gi|309320759|gb|ADO64596.1| ultraspiracle [Spodoptera littoralis]
Length = 467
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 103 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDK 160
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 161 RQRNRCQYCRYQKCLPCGMKRE 182
>gi|71040966|gb|AAZ20374.1| RXRg nuclear hormone receptor [Gecarcinus lateralis]
Length = 233
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 55/76 (72%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ERSC IDK QR RC +
Sbjct: 67 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQRNRCQY 126
Query: 185 CRFQKCLEVGMKLEVS 200
CR+QKCL +GMK E +
Sbjct: 127 CRYQKCLTMGMKREAA 142
>gi|332023659|gb|EGI63885.1| Retinoic acid receptor RXR-alpha-A [Acromyrmex echinatior]
Length = 403
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E+SC IDK
Sbjct: 77 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDK 134
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 135 RQRNRCQYCRYQKCLAMGMKRE 156
>gi|363809055|dbj|BAL41655.1| ultraspiracle protein [Scirpophaga incertulas]
Length = 408
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 49 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRGERNCIIDK 106
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 107 RQRNRCQYCRYQKCLACGMKREA 129
>gi|187940918|gb|ACD39740.1| ultraspiracle protein [Spodoptera exigua]
Length = 412
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 50 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDK 107
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 108 RQRNRCQYCRYQKCLACGMKREA 130
>gi|197098126|ref|NP_001125545.1| nuclear receptor subfamily 4 group A member 1 [Pongo abelii]
gi|55728412|emb|CAH90950.1| hypothetical protein [Pongo abelii]
Length = 598
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 92/195 (47%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 164 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 221
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG ST+ L +GI P TST A +
Sbjct: 222 ESYSMPTA---------------FPGLASTSPHLEGSGILDAPV-TSTKARS----GAPG 261
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|417347494|gb|AFX60117.1| nuclear receptor USP isoform 2 [Spodoptera frugiperda]
Length = 414
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 50 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDK 107
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 108 RQRNRCQYCRYQKCLACGMKRE 129
>gi|189237801|ref|XP_001814072.1| PREDICTED: similar to AGAP008334-PA [Tribolium castaneum]
Length = 633
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 57/87 (65%)
Query: 113 IAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
IA P T +LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C
Sbjct: 282 IAEPPSKGPTPPSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKAC 341
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLEV 199
+DK +R RC FCRFQKCL VGM EV
Sbjct: 342 PVDKRRRNRCQFCRFQKCLAVGMVKEV 368
>gi|440904694|gb|ELR55168.1| Retinoic acid receptor RXR-alpha, partial [Bos grunniens mutus]
Length = 485
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 122 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 181
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEVSSQSTHGV 207
TC + C IDK QR RC +CR+QKCL +GMK EV+ V
Sbjct: 182 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREVTPYPASAV 224
>gi|226316413|gb|ACO44670.1| retinoid X receptor isoform 3 [Crangon crangon]
Length = 399
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK
Sbjct: 66 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRACTIDK 123
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 124 RQRNRCQYCRYQKCLGMGMKRE 145
>gi|71040956|gb|AAZ20369.1| RXRb nuclear hormone receptor [Gecarcinus lateralis]
Length = 431
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 54/74 (72%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ERSC IDK QR RC +
Sbjct: 67 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQRNRCQY 126
Query: 185 CRFQKCLEVGMKLE 198
CR+QKCL +GMK E
Sbjct: 127 CRYQKCLTMGMKRE 140
>gi|226316411|gb|ACO44669.1| retinoid X receptor isoform 2 [Crangon crangon]
Length = 400
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK
Sbjct: 66 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRACTIDK 123
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 124 RQRNRCQYCRYQKCLGMGMKRE 145
>gi|195030112|ref|XP_001987912.1| GH10850 [Drosophila grimshawi]
gi|193903912|gb|EDW02779.1| GH10850 [Drosophila grimshawi]
Length = 1161
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A++SC +DK +R RC FCRF
Sbjct: 817 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKSCPVDKRRRNRCQFCRF 876
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 877 QKCLVVGMVKEV 888
>gi|71040954|gb|AAZ20368.1| RXRa nuclear hormone receptor [Gecarcinus lateralis]
Length = 436
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 55/79 (69%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
P G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ERSC IDK QR
Sbjct: 62 PTHLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQR 121
Query: 180 KRCPFCRFQKCLEVGMKLE 198
RC +CR+QKCL +GMK E
Sbjct: 122 NRCQYCRYQKCLTMGMKRE 140
>gi|226316409|gb|ACO44668.1| retinoid X receptor isoform 1 [Crangon crangon]
Length = 405
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK
Sbjct: 66 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRACTIDK 123
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 124 RQRNRCQYCRYQKCLGMGMKRE 145
>gi|226316415|gb|ACO44671.1| retinoid X receptor isoform 4 [Crangon crangon]
Length = 225
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK
Sbjct: 66 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRACTIDK 123
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 124 RQRNRCQYCRYQKCLGMGMKREA 146
>gi|242000854|ref|XP_002435070.1| retinoid X receptor, putative [Ixodes scapularis]
gi|215498400|gb|EEC07894.1| retinoid X receptor, putative [Ixodes scapularis]
Length = 400
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 71 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDK 128
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 129 RQRNRCQYCRYQKCLSCGMKREA 151
>gi|71040962|gb|AAZ20372.1| RXRe nuclear hormone receptor [Gecarcinus lateralis]
Length = 232
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 54/75 (72%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ERSC IDK QR RC +
Sbjct: 67 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCTIDKRQRNRCQY 126
Query: 185 CRFQKCLEVGMKLEV 199
CR+QKCL +GMK E
Sbjct: 127 CRYQKCLTMGMKREA 141
>gi|402886040|ref|XP_003906449.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 3
[Papio anubis]
Length = 670
Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats.
Identities = 54/111 (48%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ L +GI P + +T G E C VCGD S HYG+ TCE
Sbjct: 303 PGLAPTSPHLEGSGILDAP-----VTSTKARSGAPGGTEGRCAVCGDNASCQHYGVRTCE 357
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 358 GCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 408
>gi|321478278|gb|EFX89235.1| hypothetical protein DAPPUDRAFT_220366 [Daphnia pulex]
Length = 437
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+RSC +DK +R RC FCRF
Sbjct: 97 QLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADRSCPVDKRRRNRCQFCRF 156
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 157 QKCLSVGMVKEV 168
>gi|21464744|gb|AAM54497.1|AF411257_1 ultraspiracle protein [Trichoplusia ni]
Length = 151
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ERSC IDK
Sbjct: 49 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERSCIIDK 106
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 107 RQRNRCQYCRYQKCLACGMKREA 129
>gi|27372315|dbj|BAC53670.1| ultraspiracle [Chilo suppressalis]
Length = 410
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 49 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDK 106
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 107 RQRNRCQYCRYQKCLACGMKRE 128
>gi|189031270|gb|ACD74808.1| ultraspiracle isoform 1 [Helicoverpa armigera]
Length = 414
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 50 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDK 107
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 108 RQRNRCQYCRYQKCLACGMKREA 130
>gi|48475404|gb|AAT44330.1| USP [Plodia interpunctella]
Length = 415
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 50 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREERNCIIDK 107
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 108 RQRNRCQYCRYQKCLACGMKREA 130
>gi|260809813|ref|XP_002599699.1| hypothetical protein BRAFLDRAFT_56643 [Branchiostoma floridae]
gi|229284980|gb|EEN55711.1| hypothetical protein BRAFLDRAFT_56643 [Branchiostoma floridae]
Length = 632
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 24 LKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNNTSASAGGAGYNFNNMVDNS 83
+ P TP+ + T TPQ QLS + T+ + MV ++
Sbjct: 60 VSPGTPMSTSTATVTITVTPQ-----------QLSAAGAHLTTPTTLMVSPTSTPMVSST 108
Query: 84 YLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYG 143
L +PGG + + P +++ TP DTK +ELC VCGDK SG HYG
Sbjct: 109 TLMMTPGGTPIG---TPTAVMMSP---NSVLFTPGSGDTKP--QELCVVCGDKASGRHYG 160
Query: 144 LLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
++CE CKGFFKR+++ Y C + + C I+K R RC +CR QKCL VGM+ E
Sbjct: 161 AISCEGCKGFFKRSIRKNLGYVCRSSKECPINKHHRNRCQYCRLQKCLSVGMRSE 215
>gi|409178667|gb|AFV25499.1| ultraspiracle, partial [Zaprionus tuberculatus]
Length = 461
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 76/149 (51%), Gaps = 13/149 (8%)
Query: 50 NDTQSSQLSPMLGNNTSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFH 109
ND+ +S SP A + G NMV+ PGGG+ S
Sbjct: 6 NDSNNSSFSP------KAESPGPFLQAMNMVN-----VMPGGGNNTNQNQSQNQMNQAPA 54
Query: 110 TSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C
Sbjct: 55 AQQQQYPPNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREN 112
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
R+C IDK QR RC +CR+QKCL GMK E
Sbjct: 113 RNCIIDKRQRNRCQYCRYQKCLSCGMKRE 141
>gi|77632652|gb|ABB00308.1| ultraspiracle protein [Scaptotrigona depilis]
Length = 427
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E+SC IDK
Sbjct: 99 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDK 156
Query: 177 TQRKRCPFCRFQKCLEVGMK 196
QR RC +CR+QKCL +GMK
Sbjct: 157 RQRNRCQYCRYQKCLAMGMK 176
>gi|6983809|emb|CAB75361.1| USP protein [Tenebrio molitor]
Length = 408
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E++C IDK
Sbjct: 76 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKNCIIDK 133
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 134 RQRNRCQYCRYQKCLNMGMKREA 156
>gi|402886042|ref|XP_003906450.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 4
[Papio anubis]
Length = 652
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ L +GI P TST A + G E C VCGD S HYG+ TCE
Sbjct: 285 PGLAPTSPHLEGSGILDAPV-TSTKARS----GAPGGTEGRCAVCGDNASCQHYGVRTCE 339
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 340 GCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 390
>gi|339247015|ref|XP_003375141.1| nuclear hormone receptor family member nhr-91 [Trichinella
spiralis]
gi|316971520|gb|EFV55278.1| nuclear hormone receptor family member nhr-91 [Trichinella
spiralis]
Length = 624
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCV-AERSCHIDKTQRKRCPFCRF 187
+C +CGDK SG HYG+ TCE CKGFFKRTVQNK++Y CV + C I K QR RC +CRF
Sbjct: 208 MCTICGDKSSGLHYGIYTCEGCKGFFKRTVQNKRIYHCVLGDGCCSITKEQRNRCQYCRF 267
Query: 188 QKCLEVGMKLEV 199
QKCL GM LE
Sbjct: 268 QKCLRQGMILEA 279
>gi|193712543|ref|XP_001944711.1| PREDICTED: hypothetical protein LOC100162780 [Acyrthosiphon pisum]
Length = 728
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 6/91 (6%)
Query: 109 HTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA 168
+ + +A P P +LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A
Sbjct: 378 NATAVATAPSSP------SQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA 431
Query: 169 ERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
+++C +DK +R RC FCRFQKCL+VGM EV
Sbjct: 432 DKNCPVDKRRRNRCQFCRFQKCLQVGMVKEV 462
>gi|66864094|dbj|BAD99298.1| ultraspiracle [Leptinotarsa decemlineata]
Length = 384
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGDK SG HYG+ +CE CKGFFKRTV+ Y C E++C IDK
Sbjct: 57 PNHPLS--GSKHLCSICGDKASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKNCLIDK 114
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 115 RQRNRCQYCRYQKCLVMGMKRE 136
>gi|380017459|ref|XP_003692673.1| PREDICTED: uncharacterized protein LOC100871098 [Apis florea]
Length = 490
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 54/73 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+AE++C +DK +R RC FCRF
Sbjct: 416 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKACPVDKRRRNRCQFCRF 475
Query: 188 QKCLEVGMKLEVS 200
QKCL VGM EVS
Sbjct: 476 QKCLMVGMVKEVS 488
>gi|305690676|gb|ADM64635.1| ultraspiracle protein [Bactrocera dorsalis]
Length = 453
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK
Sbjct: 86 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRNCIIDK 143
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 144 RQRNRCQYCRYQKCLACGMKREA 166
>gi|354720734|gb|AER38412.1| ultraspiracle [Sesamia nonagrioides]
Length = 267
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 34 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDK 91
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 92 RQRNRCQYCRYQKCLACGMKREA 114
>gi|21464740|gb|AAM54495.1|AF411255_1 ultraspiracle protein [Spodoptera frugiperda]
Length = 276
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK
Sbjct: 50 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDK 107
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 108 RQRNRCQYCRYQKCLACGMKREA 130
>gi|432866776|ref|XP_004070930.1| PREDICTED: nuclear receptor subfamily 4 group A member 1-like
[Oryzias latipes]
Length = 571
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 53/80 (66%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
P K G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R
Sbjct: 226 PKLKSGSEGGCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNSKYVCLANKDCPVDKRRR 285
Query: 180 KRCPFCRFQKCLEVGMKLEV 199
RC FCRFQKCL VGM EV
Sbjct: 286 NRCQFCRFQKCLAVGMVREV 305
>gi|348580647|ref|XP_003476090.1| PREDICTED: nuclear receptor subfamily 4 group A member 1-like
[Cavia porcellus]
Length = 677
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ L S+G+ P + + T G E C VCGD S HYG+ TCE
Sbjct: 310 PGLAPTSPHLDSSGMLDAP-----VTSAKSRSGTSGGSEGRCAVCGDNASCQHYGVRTCE 364
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 365 GCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 415
>gi|407186432|gb|AFT63499.1| ultraspiracle [Bradysia coprophila]
Length = 447
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 114 AATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCH 173
A P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E++C
Sbjct: 95 AYPPNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREEKACI 152
Query: 174 IDKTQRKRCPFCRFQKCLEVGMKLEV 199
IDK QR RC +CR+QKCL GMK E
Sbjct: 153 IDKRQRNRCQYCRYQKCLVCGMKREA 178
>gi|157135212|ref|XP_001663431.1| expressed protein (AHR38) [Aedes aegypti]
gi|108870261|gb|EAT34486.1| AAEL013270-PA [Aedes aegypti]
Length = 790
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 55/78 (70%)
Query: 122 TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
T + +LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R R
Sbjct: 448 TPQSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNR 507
Query: 182 CPFCRFQKCLEVGMKLEV 199
C FCRFQKCL VGM EV
Sbjct: 508 CQFCRFQKCLAVGMVKEV 525
>gi|402886036|ref|XP_003906447.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 1
[Papio anubis]
gi|402886038|ref|XP_003906448.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 2
[Papio anubis]
gi|402886044|ref|XP_003906451.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 5
[Papio anubis]
Length = 598
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ L +GI P TST A + G E C VCGD S HYG+ TCE
Sbjct: 231 PGLAPTSPHLEGSGILDAPV-TSTKARS----GAPGGTEGRCAVCGDNASCQHYGVRTCE 285
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 286 GCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 336
>gi|332019521|gb|EGI60000.1| Putative nuclear hormone receptor HR38 [Acromyrmex echinatior]
Length = 803
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+AE++C +DK +R RC FCRF
Sbjct: 467 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKACPVDKRRRNRCQFCRF 526
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 527 QKCLMVGMVKEV 538
>gi|357602873|gb|EHJ63549.1| hypothetical protein KGM_00033 [Danaus plexippus]
Length = 572
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+AE+SC +DK +R RC FCRF
Sbjct: 235 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDKRRRNRCQFCRF 294
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 295 QKCLAVGMVKEV 306
>gi|297262413|ref|XP_001085399.2| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 1
[Macaca mulatta]
gi|355564245|gb|EHH20745.1| Orphan nuclear receptor HMR [Macaca mulatta]
gi|355786109|gb|EHH66292.1| Orphan nuclear receptor HMR [Macaca fascicularis]
Length = 652
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 89/195 (45%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 218 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 275
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P + +T
Sbjct: 276 ESYSMPTA---------------FPGLAPTSPHLEGSGILDAP-----VTSTKTRSGAPG 315
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 316 GTEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 375
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 376 CRFQKCLAVGMVKEV 390
>gi|119578627|gb|EAW58223.1| nuclear receptor subfamily 4, group A, member 1, isoform CRA_b
[Homo sapiens]
Length = 670
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 26 PKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNNTSASAGGAGYNFNNMVDNSYL 85
P+ P S TG +P + S SQ + LG S S A
Sbjct: 256 PQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEGESYSMPTA------------- 301
Query: 86 FQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLL 145
PG T+ L +GI P + +T G E C VCGD S HYG+
Sbjct: 302 --FPGLAPTSPHLEGSGILDTP-----VTSTKARSGAPGGSEGRCAVCGDNASCQHYGVR 354
Query: 146 TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TCE CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 355 TCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 408
>gi|350427740|ref|XP_003494862.1| PREDICTED: hypothetical protein LOC100741960 [Bombus impatiens]
Length = 790
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+AE++C +DK +R RC FCRF
Sbjct: 454 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKACPVDKRRRNRCQFCRF 513
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 514 QKCLMVGMVKEV 525
>gi|397522106|ref|XP_003831120.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 [Pan
paniscus]
Length = 652
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 218 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 275
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P TST A +
Sbjct: 276 ESYSMPTA---------------FPGLAPTSPHLEGSGILDAPV-TSTKARS----GAPG 315
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 316 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 375
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 376 CRFQKCLAVGMVKEV 390
>gi|314955738|gb|ADT64886.1| retinoid X receptor [Gryllus firmus]
Length = 358
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 113 IAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
I P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E++C
Sbjct: 20 IQYPPNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELSYACREEKNC 77
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLEV---SSQSTHG 206
IDK QR RC +CR+QKCL +GMK E Q T G
Sbjct: 78 IIDKRQRNRCQYCRYQKCLTMGMKREAVQEERQRTKG 114
>gi|105872963|gb|ABF74729.1| retinoid X receptor-like protein [Daphnia magna]
gi|131665089|dbj|BAF49028.1| ultraspiracle [Daphnia magna]
gi|321453064|gb|EFX64341.1| hypothetical protein DAPPUDRAFT_219609 [Daphnia pulex]
Length = 400
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R C IDK
Sbjct: 71 PNHPLSNS--KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRQCLIDK 128
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL++GMK E
Sbjct: 129 RQRNRCQYCRYQKCLQMGMKREA 151
>gi|332839341|ref|XP_003313739.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 3
[Pan troglodytes]
Length = 652
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 218 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 275
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P TST A +
Sbjct: 276 ESYSMPTA---------------FPGLAPTSPHLEGSGILDAPV-TSTKARS----GAPG 315
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 316 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 375
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 376 CRFQKCLAVGMVKEV 390
>gi|1718061|sp|P54779.1|USP_MANSE RecName: Full=Protein ultraspiracle homolog; AltName: Full=Nuclear
receptor subfamily 2 group B member 4
gi|1304738|gb|AAB64234.1| MsUSP-1 protein [Manduca sexta]
Length = 461
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK
Sbjct: 102 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRNCIIDK 159
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 160 RQRNRCQYCRYQKCLACGMKRE 181
>gi|344236823|gb|EGV92926.1| Retinoic acid receptor RXR-gamma [Cricetulus griseus]
Length = 414
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 118 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 177
Query: 177 TQRKRCPFCRFQKCLEVGMKLEVSS 201
QR RC +CR+QKCL +GMK E S
Sbjct: 178 RQRNRCQYCRYQKCLVMGMKREAGS 202
>gi|332839343|ref|XP_509073.3| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 4
[Pan troglodytes]
gi|410215234|gb|JAA04836.1| nuclear receptor subfamily 4, group A, member 1 [Pan troglodytes]
gi|410256442|gb|JAA16188.1| nuclear receptor subfamily 4, group A, member 1 [Pan troglodytes]
gi|410292876|gb|JAA25038.1| nuclear receptor subfamily 4, group A, member 1 [Pan troglodytes]
gi|410340573|gb|JAA39233.1| nuclear receptor subfamily 4, group A, member 1 [Pan troglodytes]
Length = 611
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 177 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 234
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P TST A +
Sbjct: 235 ESYSMPTA---------------FPGLAPTSPHLEGSGILDAPV-TSTKARS----GAPG 274
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 275 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 334
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 335 CRFQKCLAVGMVKEV 349
>gi|239735516|ref|NP_001155140.1| ultraspiracle [Acyrthosiphon pisum]
Length = 433
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 61 LGNNTSASAGGAGYNFNNMVDNSYL---FQSPGGGSTNMDLSSAGISYHPFHTSTIAATP 117
L NN S + G + D + L F PG + L S + ++ + +P
Sbjct: 30 LDNNMSLGSMGPQSPLDLKPDTATLMVNFSPPGAPLSPAGLYSVDRNNMMNNSCNVQDSP 89
Query: 118 EHPDTK--EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHID 175
+P G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E C ID
Sbjct: 90 NYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKNLSYACREENKCIID 149
Query: 176 KTQRKRCPFCRFQKCLEVGMKLE 198
K QR RC +CR+QKCL +GMK E
Sbjct: 150 KRQRNRCQYCRYQKCLTMGMKRE 172
>gi|238558272|gb|ACR45970.1| ultraspiracle, partial [Acyrthosiphon pisum]
Length = 428
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 61 LGNNTSASAGGAGYNFNNMVDNSYL---FQSPGGGSTNMDLSSAGISYHPFHTSTIAATP 117
L NN S + G + D + L F PG + L S + ++ + +P
Sbjct: 30 LDNNMSLGSMGPQSPLDLKPDTATLMVNFSPPGAPLSPAGLYSVDRNNMMNNSCNVQDSP 89
Query: 118 EHPDTK--EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHID 175
+P G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E C ID
Sbjct: 90 NYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKNLSYACREENKCIID 149
Query: 176 KTQRKRCPFCRFQKCLEVGMKLE 198
K QR RC +CR+QKCL +GMK E
Sbjct: 150 KRQRNRCQYCRYQKCLTMGMKRE 172
>gi|297262409|ref|XP_002798634.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 2
[Macaca mulatta]
gi|297262411|ref|XP_002798635.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 3
[Macaca mulatta]
Length = 598
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 89/195 (45%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 164 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 221
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P + +T
Sbjct: 222 ESYSMPTA---------------FPGLAPTSPHLEGSGILDAP-----VTSTKTRSGAPG 261
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GTEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|340723425|ref|XP_003400090.1| PREDICTED: hypothetical protein LOC100642535 [Bombus terrestris]
Length = 790
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+AE++C +DK +R RC FCRF
Sbjct: 454 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKACPVDKRRRNRCQFCRF 513
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 514 QKCLMVGMVKEV 525
>gi|383857638|ref|XP_003704311.1| PREDICTED: uncharacterized protein LOC100884030 [Megachile
rotundata]
Length = 793
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+AE++C +DK +R RC FCRF
Sbjct: 457 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKACPVDKRRRNRCQFCRF 516
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 517 QKCLMVGMVKEV 528
>gi|332839337|ref|XP_003313737.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 1
[Pan troglodytes]
gi|332839339|ref|XP_003313738.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 2
[Pan troglodytes]
gi|410046663|ref|XP_003952237.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 [Pan
troglodytes]
gi|410256444|gb|JAA16189.1| nuclear receptor subfamily 4, group A, member 1 [Pan troglodytes]
gi|410340575|gb|JAA39234.1| nuclear receptor subfamily 4, group A, member 1 [Pan troglodytes]
Length = 598
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 164 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 221
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P TST A +
Sbjct: 222 ESYSMPTA---------------FPGLAPTSPHLEGSGILDAPV-TSTKARS----GAPG 261
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|441632234|ref|XP_003252164.2| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor subfamily 4 group
A member 1 [Nomascus leucogenys]
Length = 587
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 153 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 210
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P TST A +
Sbjct: 211 ESYSMPTA---------------FPGLAPTSPHLEGSGILDAPV-TSTKARS----GAPG 250
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 251 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 310
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 311 CRFQKCLAVGMVKEV 325
>gi|283488474|gb|ADB24760.1| retinoid x receptor [Agelena silvatica]
Length = 406
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Query: 116 TPEHPDTKE--GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCH 173
+P++P G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C
Sbjct: 79 SPQYPANHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREERNCI 138
Query: 174 IDKTQRKRCPFCRFQKCLEVGMKLE 198
IDK QR RC +CR+QKCL +GMK E
Sbjct: 139 IDKRQRNRCQYCRYQKCLSMGMKRE 163
>gi|60892853|gb|AAX37291.1| nuclear receptor usp/RXR [Xenos pecki]
Length = 405
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + + LC +CGDK SG HYG+ +CE CKGFFKRTV+ Y C E+SC +D+
Sbjct: 74 PNHPLS--NYKHLCAICGDKASGKHYGVYSCEGCKGFFKRTVRKDLTYACREEKSCLVDR 131
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 132 RQRNRCQYCRYQKCLAMGMKRE 153
>gi|313244758|emb|CBY15470.1| unnamed protein product [Oikopleura dioica]
Length = 431
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 13/150 (8%)
Query: 52 TQSSQLSPMLGNNTSASAGGAGYNFN-NMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHT 110
T Q++ MLG+N G N + N++ + P M+ + P T
Sbjct: 35 TSLGQVNTMLGHNPFVVVGQNNQNMSSNIIPQA---SPPNNVDVKMEADGSMDVKRPLRT 91
Query: 111 STIAATPEHPDTKEGIE--ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA 168
S+ ++ G+E +C VC D+ SG HYG+ +CE CKGFFKRTV+ YTC
Sbjct: 92 SSRSSVG-------GLEGNRMCVVCQDRASGKHYGVFSCEGCKGFFKRTVRKNLKYTCRD 144
Query: 169 ERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
E+SC IDK QR RC +CR+QKCL GMK E
Sbjct: 145 EKSCTIDKRQRNRCQYCRYQKCLLAGMKKE 174
>gi|409178669|gb|AFV25500.1| ultraspiracle, partial [Drosophila caribiana]
Length = 418
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 69 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 126
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 127 RQRNRCQYCRYQKCLSCGMKREA 149
>gi|47077635|dbj|BAD18699.1| unnamed protein product [Homo sapiens]
Length = 652
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 218 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 275
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P TST A +
Sbjct: 276 ESYSMPTA---------------FPGLAPTSPHLEGSGILDTPV-TSTKARS----GAPG 315
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 316 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 375
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 376 CRFQKCLAVGMVKEV 390
>gi|45384256|ref|NP_990625.1| retinoic acid receptor RXR-gamma [Gallus gallus]
gi|133700|sp|P28701.1|RXRG_CHICK RecName: Full=Retinoic acid receptor RXR-gamma; AltName:
Full=Nuclear receptor subfamily 2 group B member 3;
AltName: Full=Retinoid X receptor gamma
gi|63496|emb|CAA41743.1| retinoic acid receptor [Gallus gallus]
Length = 467
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G + +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 130 YPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 189
Query: 177 TQRKRCPFCRFQKCLEVGMKLEVSSQSTHG 206
QR RC +CR+QKCL +GMK E + G
Sbjct: 190 RQRNRCQYCRYQKCLAMGMKREAVQEERQG 219
>gi|320202956|ref|NP_001189162.1| nuclear receptor subfamily 4 group A member 1 isoform 2 [Homo
sapiens]
gi|119578626|gb|EAW58222.1| nuclear receptor subfamily 4, group A, member 1, isoform CRA_a
[Homo sapiens]
gi|194387126|dbj|BAG59929.1| unnamed protein product [Homo sapiens]
Length = 611
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 177 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 234
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P TST A +
Sbjct: 235 ESYSMPTA---------------FPGLAPTSPHLEGSGILDTPV-TSTKARS----GAPG 274
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 275 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 334
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 335 CRFQKCLAVGMVKEV 349
>gi|313219082|emb|CBY43294.1| unnamed protein product [Oikopleura dioica]
Length = 355
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 13/150 (8%)
Query: 52 TQSSQLSPMLGNNTSASAGGAGYNFN-NMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHT 110
T Q++ MLG+N G N + N++ + P M+ + P T
Sbjct: 35 TSLGQVNTMLGHNPFVVVGQNNQNMSSNIIPQA---SPPNNVDVKMEADGSMDVKRPLRT 91
Query: 111 STIAATPEHPDTKEGIE--ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA 168
S+ ++ G+E +C VC D+ SG HYG+ +CE CKGFFKRTV+ YTC
Sbjct: 92 SSRSSVG-------GLEGNRMCVVCQDRASGKHYGVFSCEGCKGFFKRTVRKNLKYTCRD 144
Query: 169 ERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
E+SC IDK QR RC +CR+QKCL GMK E
Sbjct: 145 EKSCTIDKRQRNRCQYCRYQKCLLAGMKKE 174
>gi|410900061|ref|XP_003963515.1| PREDICTED: nuclear receptor subfamily 4 group A member 1-like
[Takifugu rubripes]
Length = 573
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 233 GTESCCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNSKYVCLANKDCPVDKRRRNRCQF 292
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 293 CRFQKCLAVGMVREV 307
>gi|427795311|gb|JAA63107.1| Putative nuclear receptor of the nerve growth factor-induced
protein b type, partial [Rhipicephalus pulchellus]
Length = 700
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 51/72 (70%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A R C +DK +R RC FCRF
Sbjct: 365 QLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKGAKYVCLANRDCPVDKRRRNRCQFCRF 424
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 425 QKCLAVGMVKEV 436
>gi|427796259|gb|JAA63581.1| Putative nuclear receptor of the nerve growth factor-induced
protein b type, partial [Rhipicephalus pulchellus]
Length = 705
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 51/72 (70%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A R C +DK +R RC FCRF
Sbjct: 370 QLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKGAKYVCLANRDCPVDKRRRNRCQFCRF 429
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 430 QKCLAVGMVKEV 441
>gi|426372588|ref|XP_004053204.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 3
[Gorilla gorilla gorilla]
Length = 611
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ L +GI P TST A + G E C VCGD S HYG+ TCE
Sbjct: 244 PGLAPTSPHLEGSGILDAPV-TSTKARS----GAPGGSEGRCAVCGDNASCQHYGVRTCE 298
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 299 GCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 349
>gi|426372584|ref|XP_004053202.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 1
[Gorilla gorilla gorilla]
gi|426372586|ref|XP_004053203.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 2
[Gorilla gorilla gorilla]
gi|426372590|ref|XP_004053205.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 4
[Gorilla gorilla gorilla]
Length = 598
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ L +GI P TST A + G E C VCGD S HYG+ TCE
Sbjct: 231 PGLAPTSPHLEGSGILDAPV-TSTKARS----GAPGGSEGRCAVCGDNASCQHYGVRTCE 285
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 286 GCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 336
>gi|328794461|ref|XP_623628.3| PREDICTED: probable nuclear hormone receptor HR38-like, partial
[Apis mellifera]
Length = 704
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+AE++C +DK +R RC FCRF
Sbjct: 368 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKACPVDKRRRNRCQFCRF 427
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 428 QKCLMVGMVKEV 439
>gi|328779598|ref|XP_623987.3| PREDICTED: probable nuclear hormone receptor HR38 [Apis mellifera]
Length = 651
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+AE++C +DK +R RC FCRF
Sbjct: 315 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKACPVDKRRRNRCQFCRF 374
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 375 QKCLMVGMVKEV 386
>gi|158296777|ref|XP_317123.4| AGAP008334-PA [Anopheles gambiae str. PEST]
gi|157014874|gb|EAA12420.4| AGAP008334-PA [Anopheles gambiae str. PEST]
Length = 732
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 57/86 (66%), Gaps = 6/86 (6%)
Query: 114 AATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCH 173
A TP P +LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C
Sbjct: 388 APTPVSPS------QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACP 441
Query: 174 IDKTQRKRCPFCRFQKCLEVGMKLEV 199
+DK +R RC FCRFQKCL VGM EV
Sbjct: 442 VDKRRRNRCQFCRFQKCLAVGMVKEV 467
>gi|227150229|gb|ACP19739.1| putative retinoid X receptor [Calanus finmarchicus]
Length = 405
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 90/175 (51%), Gaps = 35/175 (20%)
Query: 30 IQQLLSAATGA-QTP-QMQHSNNDTQSSQLSPMLGNN-TSASAGGAGYNFNNMVDNSYLF 86
I QL +A G Q+P +M+ + + SPM+ + TSAS G F
Sbjct: 6 INQLDAANFGGPQSPMEMKPDTSLLTTVNNSPMMSQSPTSASTSFMG------------F 53
Query: 87 QSPGGGSTNMDLSSAGISYHPFHTSTIAAT--PEHPDTKEGIEELCPVCGDKVSGYHYGL 144
SPGGG S + T P HP + G + +C +CGD+ SG HYG+
Sbjct: 54 GSPGGG----------------QKSPLPGTYPPSHPLS--GAKHMCSICGDRASGKHYGV 95
Query: 145 LTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
+CE CKGFFKRTV+ + Y C ++ C IDK QR RC FCR+ KC+ +GMK E
Sbjct: 96 YSCEGCKGFFKRTVRKELSYACREDKQCLIDKRQRNRCQFCRYNKCMAMGMKREA 150
>gi|348565839|ref|XP_003468710.1| PREDICTED: retinoic acid receptor RXR-gamma-like [Cavia porcellus]
Length = 451
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 114 YPSTSPGALVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 173
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 174 RQRNRCQYCRYQKCLVMGMKRE 195
>gi|52545682|emb|CAD38550.2| hypothetical protein [Homo sapiens]
Length = 598
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 164 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 221
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P TST A +
Sbjct: 222 ESYSMPTA---------------FPGLAPTSPHLEGSGILDTPV-TSTKARS----GAPG 261
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|48145525|emb|CAG32985.1| NR4A1 [Homo sapiens]
Length = 598
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 164 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 221
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P TST A +
Sbjct: 222 ESYSMPTA---------------FPGLAPTSPHLEGSGILDTPV-TSTKARS----GAPG 261
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|405950887|gb|EKC18844.1| Putative nuclear hormone receptor HR38 [Crassostrea gigas]
Length = 664
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 123 KEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRC 182
+EG+ LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R RC
Sbjct: 323 REGM--LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRC 380
Query: 183 PFCRFQKCLEVGMKLEV 199
FCRFQKCL VGM EV
Sbjct: 381 QFCRFQKCLSVGMVKEV 397
>gi|270008126|gb|EFA04574.1| hormone receptor in 38-like protein [Tribolium castaneum]
Length = 744
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 57/87 (65%)
Query: 113 IAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
IA P T +LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C
Sbjct: 298 IAEPPSKGPTPPSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKAC 357
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLEV 199
+DK +R RC FCRFQKCL VGM EV
Sbjct: 358 PVDKRRRNRCQFCRFQKCLAVGMVKEV 384
>gi|21361342|ref|NP_002126.2| nuclear receptor subfamily 4 group A member 1 isoform 1 [Homo
sapiens]
gi|27894344|ref|NP_775180.1| nuclear receptor subfamily 4 group A member 1 isoform 1 [Homo
sapiens]
gi|127819|sp|P22736.1|NR4A1_HUMAN RecName: Full=Nuclear receptor subfamily 4 group A member 1;
AltName: Full=Early response protein NAK1; AltName:
Full=Nuclear hormone receptor NUR/77; Short=Nur77;
AltName: Full=Orphan nuclear receptor HMR; AltName:
Full=Orphan nuclear receptor TR3; AltName: Full=ST-59;
AltName: Full=Testicular receptor 3
gi|1813882|dbj|BAA08565.1| DNA binding protein [Homo sapiens]
gi|16359383|gb|AAH16147.1| Nuclear receptor subfamily 4, group A, member 1 [Homo sapiens]
gi|30583127|gb|AAP35808.1| nuclear receptor subfamily 4, group A, member 1 [Homo sapiens]
gi|61360895|gb|AAX41947.1| nuclear receptor subfamily 4 group A member 1 [synthetic construct]
gi|61360899|gb|AAX41948.1| nuclear receptor subfamily 4 group A member 1 [synthetic construct]
gi|119578629|gb|EAW58225.1| nuclear receptor subfamily 4, group A, member 1, isoform CRA_d
[Homo sapiens]
gi|119578630|gb|EAW58226.1| nuclear receptor subfamily 4, group A, member 1, isoform CRA_d
[Homo sapiens]
gi|119578631|gb|EAW58227.1| nuclear receptor subfamily 4, group A, member 1, isoform CRA_d
[Homo sapiens]
gi|119578632|gb|EAW58228.1| nuclear receptor subfamily 4, group A, member 1, isoform CRA_d
[Homo sapiens]
gi|123980462|gb|ABM82060.1| nuclear receptor subfamily 4, group A, member 1 [synthetic
construct]
gi|123995275|gb|ABM85239.1| nuclear receptor subfamily 4, group A, member 1 [synthetic
construct]
gi|216409742|dbj|BAH02308.1| nuclear receptor subfamily 4 [Homo sapiens]
gi|307684740|dbj|BAJ20410.1| nuclear receptor subfamily 4, group A, member 1 [synthetic
construct]
gi|325495521|gb|ADZ17366.1| nerve growth factor IB nuclear receptor variant 1 [Homo sapiens]
Length = 598
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 164 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 221
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P TST A +
Sbjct: 222 ESYSMPTA---------------FPGLAPTSPHLEGSGILDTPV-TSTKARS----GAPG 261
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|198470596|ref|XP_001355352.2| GA18146 [Drosophila pseudoobscura pseudoobscura]
gi|198145527|gb|EAL32409.2| GA18146 [Drosophila pseudoobscura pseudoobscura]
Length = 487
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 82 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 139
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 140 RQRNRCQYCRYQKCLSCGMKREA 162
>gi|30584675|gb|AAP36590.1| Homo sapiens nuclear receptor subfamily 4, group A, member 1
[synthetic construct]
gi|61370617|gb|AAX43525.1| nuclear receptor subfamily 4 group A member 1 [synthetic construct]
gi|61370625|gb|AAX43526.1| nuclear receptor subfamily 4 group A member 1 [synthetic construct]
Length = 599
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 164 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 221
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P TST A +
Sbjct: 222 ESYSMPTA---------------FPGLAPTSPHLEGSGILDTPV-TSTKARS----GAPG 261
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|345806213|ref|XP_858806.2| PREDICTED: retinoic acid receptor RXR-alpha isoform 11 [Canis lupus
familiaris]
Length = 492
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 140 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 199
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 200 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 234
>gi|351696221|gb|EHA99139.1| Retinoic acid receptor RXR-gamma [Heterocephalus glaber]
Length = 463
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGALVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREA 208
>gi|149755798|ref|XP_001492700.1| PREDICTED: retinoic acid receptor RXR-gamma-like [Equus caballus]
Length = 539
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREA 208
>gi|296229938|ref|XP_002760488.1| PREDICTED: retinoic acid receptor RXR-gamma [Callithrix jacchus]
Length = 463
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREA 208
>gi|327276463|ref|XP_003222989.1| PREDICTED: retinoic acid receptor RXR-alpha-like, partial [Anolis
carolinensis]
Length = 451
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 99 PLGINGVLKVPVHPSSAMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 158
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 159 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 193
>gi|427778501|gb|JAA54702.1| Putative retinoid x receptor alpha a [Rhipicephalus pulchellus]
Length = 448
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 74/143 (51%), Gaps = 15/143 (10%)
Query: 59 PMLGNNTSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPE 118
P L N S++A VD+ + P GS ++ I +S A
Sbjct: 52 PPLSNGPSSAAA---------VDSRFPATHPLSGSKHL----CSIXXXNGPSSAAAVDSR 98
Query: 119 HPDTK--EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P T G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER C +DK
Sbjct: 99 FPATHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERRCVVDK 158
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 159 RQRNRCQYCRYQKCLACGMKREA 181
>gi|216409720|dbj|BAH02297.1| retinoid X receptor-gamma [Homo sapiens]
Length = 463
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREA 208
>gi|195397487|ref|XP_002057360.1| GJ16389 [Drosophila virilis]
gi|194147127|gb|EDW62846.1| GJ16389 [Drosophila virilis]
Length = 499
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 87 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLAYACRENRNCIIDK 144
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 145 RQRNRCQYCRYQKCLSCGMKREA 167
>gi|383872390|ref|NP_001244539.1| retinoic acid receptor RXR-gamma [Macaca mulatta]
gi|355558991|gb|EHH15771.1| hypothetical protein EGK_01907 [Macaca mulatta]
gi|355746155|gb|EHH50780.1| hypothetical protein EGM_01657 [Macaca fascicularis]
gi|380815424|gb|AFE79586.1| retinoic acid receptor RXR-gamma isoform a [Macaca mulatta]
Length = 463
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREA 208
>gi|440910600|gb|ELR60380.1| Retinoic acid receptor RXR-gamma, partial [Bos grunniens mutus]
Length = 447
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 110 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 169
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 170 RQRNRCQYCRYQKCLVMGMKRE 191
>gi|5902068|ref|NP_008848.1| retinoic acid receptor RXR-gamma isoform a [Homo sapiens]
gi|114561087|ref|XP_513962.2| PREDICTED: retinoic acid receptor RXR-gamma isoform 2 [Pan
troglodytes]
gi|397508368|ref|XP_003824630.1| PREDICTED: retinoic acid receptor RXR-gamma [Pan paniscus]
gi|1350913|sp|P48443.1|RXRG_HUMAN RecName: Full=Retinoic acid receptor RXR-gamma; AltName:
Full=Nuclear receptor subfamily 2 group B member 3;
AltName: Full=Retinoid X receptor gamma
gi|1053069|gb|AAA80681.1| retinoid X receptor-gamma [Homo sapiens]
gi|15082315|gb|AAH12063.1| Retinoid X receptor, gamma [Homo sapiens]
gi|48145527|emb|CAG32986.1| RXRG [Homo sapiens]
gi|119611151|gb|EAW90745.1| retinoid X receptor, gamma [Homo sapiens]
gi|190689913|gb|ACE86731.1| retinoid X receptor, gamma protein [synthetic construct]
gi|190691285|gb|ACE87417.1| retinoid X receptor, gamma protein [synthetic construct]
gi|261858858|dbj|BAI45951.1| retinoid X receptor, gamma [synthetic construct]
gi|325495501|gb|ADZ17356.1| retinoid X nuclear receptor gamma variant 1 [Homo sapiens]
gi|326205168|dbj|BAJ83970.1| retinoic acid receptor RXR-gamma [Homo sapiens]
Length = 463
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREA 208
>gi|348574546|ref|XP_003473051.1| PREDICTED: retinoic acid receptor RXR-alpha-like [Cavia porcellus]
Length = 549
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 197 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 256
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 257 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 290
>gi|197101785|ref|NP_001124824.1| retinoic acid receptor RXR-gamma [Pongo abelii]
gi|402858038|ref|XP_003893537.1| PREDICTED: retinoic acid receptor RXR-gamma [Papio anubis]
gi|75062013|sp|Q5REL6.1|RXRG_PONAB RecName: Full=Retinoic acid receptor RXR-gamma; AltName:
Full=Nuclear receptor subfamily 2 group B member 3;
AltName: Full=Retinoid X receptor gamma
gi|55726030|emb|CAH89791.1| hypothetical protein [Pongo abelii]
Length = 463
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREA 208
>gi|395844547|ref|XP_003795021.1| PREDICTED: retinoic acid receptor RXR-alpha [Otolemur garnettii]
Length = 487
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 135 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 194
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 195 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 229
>gi|355752946|gb|EHH56992.1| hypothetical protein EGM_06542, partial [Macaca fascicularis]
Length = 453
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 101 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 160
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 161 TCRDNKDCLIDKRQRNRCKYCRYQKCLAMGMKREA 195
>gi|149058123|gb|EDM09280.1| retinoid X receptor gamma, isoform CRA_b [Rattus norvegicus]
Length = 415
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREA 208
>gi|426332559|ref|XP_004027871.1| PREDICTED: retinoic acid receptor RXR-gamma [Gorilla gorilla
gorilla]
Length = 463
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>gi|403272547|ref|XP_003928117.1| PREDICTED: retinoic acid receptor RXR-gamma [Saimiri boliviensis
boliviensis]
Length = 463
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREA 208
>gi|158962474|dbj|BAF91724.1| retinoid X receptor [Ornithodoros moubata]
Length = 453
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK
Sbjct: 93 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRNCVIDK 150
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 151 RQRNRCQYCRYQKCLSCGMKRE 172
>gi|417515778|gb|JAA53699.1| retinoic acid receptor RXR-alpha [Sus scrofa]
Length = 467
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 115 PLGINGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 174
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 175 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 209
>gi|332219399|ref|XP_003258843.1| PREDICTED: retinoic acid receptor RXR-gamma [Nomascus leucogenys]
Length = 463
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREA 208
>gi|464702|sp|Q05343.1|RXRA_RAT RecName: Full=Retinoic acid receptor RXR-alpha; AltName:
Full=Nuclear receptor subfamily 2 group B member 1;
AltName: Full=Retinoid X receptor alpha
gi|206819|gb|AAA42093.1| retinoid X receptor alpha [Rattus norvegicus]
Length = 467
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 115 PLGLNGVLKVPAHPSGNMSSFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 174
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 175 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 209
>gi|53315|emb|CAA42718.1| N10 nuclear protein [Mus musculus]
Length = 601
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ + ++GI P + +T G E C VCGD S HYG+ TCE
Sbjct: 234 PGLAPTSPNRDTSGILDAP-----VTSTKSRSGASGGSEGRCAVCGDNASCQHYGVRTCE 288
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 289 GCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 339
>gi|210060988|pdb|3DZU|A Chain A, Intact Ppar Gamma - Rxr Alpha Nuclear Receptor Complex On
Dna Bound With Bvt.13, 9-Cis Retinoic Acid And Ncoa2
Peptide
gi|210060994|pdb|3DZY|A Chain A, Intact Ppar Gamma - Rxr Alpha Nuclear Receptor Complex On
Dna Bound With Rosiglitazone, 9-Cis Retinoic Acid And
Ncoa2 Peptide
gi|210061000|pdb|3E00|A Chain A, Intact Ppar Gamma - Rxr Alpha Nuclear Receptor Complex On
Dna Bound With Gw9662, 9-Cis Retinoic Acid And Ncoa2
Peptide
Length = 467
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 115 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 174
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 175 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 209
>gi|194912875|ref|XP_001982583.1| GG12659 [Drosophila erecta]
gi|190648259|gb|EDV45552.1| GG12659 [Drosophila erecta]
Length = 507
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 92 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 149
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 150 RQRNRCQYCRYQKCLTCGMKREA 172
>gi|6677829|ref|NP_033133.1| retinoic acid receptor RXR-gamma isoform 1 [Mus musculus]
gi|1350914|sp|P28705.2|RXRG_MOUSE RecName: Full=Retinoic acid receptor RXR-gamma; AltName:
Full=Nuclear receptor subfamily 2 group B member 3;
AltName: Full=Retinoid X receptor gamma
gi|200882|gb|AAA40082.1| retinoid X receptor-gamma [Mus musculus]
gi|386367|gb|AAB27244.1| retinoid-X receptor-gamma isoform 1 [Mus sp.]
gi|34849539|gb|AAH58401.1| Retinoid X receptor gamma [Mus musculus]
gi|148707231|gb|EDL39178.1| retinoid X receptor gamma [Mus musculus]
Length = 463
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>gi|33943178|gb|AAQ55293.1| nuclear receptor RXR-l [Locusta migratoria]
Length = 411
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK
Sbjct: 77 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCIIDK 134
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 135 RQRNRCQYCRYQKCLAMGMKREA 157
>gi|115495279|ref|NP_001068876.1| retinoic acid receptor RXR-gamma [Bos taurus]
gi|119367365|sp|Q0VC20.1|RXRG_BOVIN RecName: Full=Retinoic acid receptor RXR-gamma; AltName:
Full=Nuclear receptor subfamily 2 group B member 3;
AltName: Full=Retinoid X receptor gamma
gi|111305288|gb|AAI20392.1| Retinoid X receptor, gamma [Bos taurus]
gi|296489911|tpg|DAA32024.1| TPA: retinoic acid receptor RXR-gamma [Bos taurus]
Length = 463
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREA 208
>gi|417401446|gb|JAA47609.1| Putative retinoic acid receptor rxr-alpha [Desmodus rotundus]
Length = 467
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 115 PLGINGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 174
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 175 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 209
>gi|148747360|ref|NP_036937.2| retinoic acid receptor RXR-alpha [Rattus norvegicus]
gi|110781215|emb|CAL25727.1| retinoid X receptor alpha [Rattus norvegicus]
gi|110781217|emb|CAL25728.1| retinoid X receptor alpha [Rattus norvegicus]
gi|112982471|emb|CAL36079.1| retinoid X receptor alpha [Rattus norvegicus]
gi|149039209|gb|EDL93429.1| retinoid X receptor alpha, isoform CRA_a [Rattus norvegicus]
Length = 467
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 115 PLGLNGVLKVPAHPSGNMSSFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 174
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 175 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 209
>gi|410979449|ref|XP_003996096.1| PREDICTED: retinoic acid receptor RXR-alpha [Felis catus]
Length = 527
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 175 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 234
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 235 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 269
>gi|148676425|gb|EDL08372.1| retinoid X receptor alpha [Mus musculus]
Length = 457
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 105 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 164
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 165 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 199
>gi|6754216|ref|NP_034574.1| nuclear receptor subfamily 4 group A member 1 [Mus musculus]
gi|128911|sp|P12813.1|NR4A1_MOUSE RecName: Full=Nuclear receptor subfamily 4 group A member 1;
AltName: Full=Nuclear hormone receptor NUR/77; AltName:
Full=Nuclear protein N10; AltName: Full=Orphan nuclear
receptor HMR
gi|53313|emb|CAA34862.1| N10 nuclear protein [Mus musculus]
gi|200116|gb|AAA39843.1| thyroid hormone receptor [Mus musculus]
gi|12836082|dbj|BAB23493.1| unnamed protein product [Mus musculus]
gi|13435840|gb|AAH04770.1| Nuclear receptor subfamily 4, group A, member 1 [Mus musculus]
gi|71059903|emb|CAJ18495.1| Nr4a1 [Mus musculus]
gi|74178647|dbj|BAE33997.1| unnamed protein product [Mus musculus]
gi|148672107|gb|EDL04054.1| nuclear receptor subfamily 4, group A, member 1 [Mus musculus]
Length = 601
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ + ++GI P + +T G E C VCGD S HYG+ TCE
Sbjct: 234 PGLAPTSPNRDTSGILDAP-----VTSTKSRSGASGGSEGRCAVCGDNASCQHYGVRTCE 288
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 289 GCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 339
>gi|355567352|gb|EHH23693.1| hypothetical protein EGK_07223, partial [Macaca mulatta]
Length = 453
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 101 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 160
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 161 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 195
>gi|326930478|ref|XP_003211374.1| PREDICTED: LOW QUALITY PROTEIN: retinoic acid receptor
RXR-alpha-like [Meleagris gallopavo]
Length = 497
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 145 PLGLNGVLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 204
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 205 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 239
>gi|167016572|sp|Q0GFF6.2|RXRG_PIG RecName: Full=Retinoic acid receptor RXR-gamma; AltName:
Full=Nuclear receptor subfamily 2 group B member 3;
AltName: Full=Retinoid X receptor gamma
Length = 463
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>gi|83026436|gb|ABB96254.1| retinoid X receptor, alpha [Homo sapiens]
Length = 452
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 100 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 159
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 160 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 194
>gi|6755384|ref|NP_035435.1| retinoic acid receptor RXR-alpha [Mus musculus]
gi|133702|sp|P28700.1|RXRA_MOUSE RecName: Full=Retinoic acid receptor RXR-alpha; AltName:
Full=Nuclear receptor subfamily 2 group B member 1;
AltName: Full=Retinoid X receptor alpha
gi|54022|emb|CAA46962.1| retinoid X receptor-alpha [Mus musculus]
gi|200878|gb|AAA40080.1| retinoid X receptor alpha [Mus musculus]
gi|187953011|gb|AAI38803.1| Retinoid X receptor alpha [Mus musculus]
gi|187954071|gb|AAI38801.1| Retinoid X receptor alpha [Mus musculus]
Length = 467
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 115 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 174
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 175 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 209
>gi|194225999|ref|XP_001917400.1| PREDICTED: retinoic acid receptor RXR-alpha-like [Equus caballus]
Length = 587
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 235 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 294
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 295 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 329
>gi|427788989|gb|JAA59946.1| Putative nuclear receptor of the nerve growth factor-induced
protein b type [Rhipicephalus pulchellus]
Length = 667
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 51/72 (70%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A R C +DK +R RC FCRF
Sbjct: 332 QLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKGAKYVCLANRDCPVDKRRRNRCQFCRF 391
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 392 QKCLAVGMVKEV 403
>gi|395825135|ref|XP_003785797.1| PREDICTED: retinoic acid receptor RXR-gamma [Otolemur garnettii]
Length = 463
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>gi|354486852|ref|XP_003505591.1| PREDICTED: LOW QUALITY PROTEIN: retinoic acid receptor
RXR-gamma-like [Cricetulus griseus]
Length = 463
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>gi|74194825|dbj|BAE26004.1| unnamed protein product [Mus musculus]
Length = 467
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 115 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 174
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 175 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 208
>gi|194332487|ref|NP_001123685.1| retinoic acid receptor RXR-gamma [Sus scrofa]
gi|112820329|gb|ABI24018.1| retinoid X receptor gamma [Sus scrofa]
Length = 463
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>gi|324504682|gb|ADY42020.1| Retinoic acid receptor beta [Ascaris suum]
Length = 616
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
+S+G +P + + P T ELC VC DK SG+HYG+++CE CKGFF+RTV
Sbjct: 331 ASSGYDLYPSSHGGASLSTTLPTTMSNTRELCVVCNDKASGFHYGVMSCEGCKGFFRRTV 390
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEVSSQ 202
Q Y+C +++C +D+ R RC CRF+KCL+ GM E Q
Sbjct: 391 QKNMEYSCHKDKACKVDRISRNRCQSCRFEKCLKAGMSKESVRQ 434
>gi|427796263|gb|JAA63583.1| Putative nuclear receptor of the nerve growth factor-induced
protein b type, partial [Rhipicephalus pulchellus]
Length = 686
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 51/72 (70%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A R C +DK +R RC FCRF
Sbjct: 351 QLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKGAKYVCLANRDCPVDKRRRNRCQFCRF 410
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 411 QKCLAVGMVKEV 422
>gi|4003528|gb|AAC95154.1| retinoic acid receptor RXR [Cloning vector pERV3]
Length = 479
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 127 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 186
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 187 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 221
>gi|54026|emb|CAA46964.1| retinoid X receptor-gamma [Mus musculus]
Length = 463
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>gi|4506755|ref|NP_002948.1| retinoic acid receptor RXR-alpha [Homo sapiens]
gi|133701|sp|P19793.1|RXRA_HUMAN RecName: Full=Retinoic acid receptor RXR-alpha; AltName:
Full=Nuclear receptor subfamily 2 group B member 1;
AltName: Full=Retinoid X receptor alpha
gi|35885|emb|CAA36982.1| unnamed protein product [Homo sapiens]
gi|84201602|gb|AAI10999.1| Retinoid X receptor, alpha [Homo sapiens]
gi|119608529|gb|EAW88123.1| retinoid X receptor, alpha, isoform CRA_b [Homo sapiens]
gi|119608530|gb|EAW88124.1| retinoid X receptor, alpha, isoform CRA_b [Homo sapiens]
gi|167773495|gb|ABZ92182.1| retinoid X receptor, alpha [synthetic construct]
gi|208965438|dbj|BAG72733.1| retinoid X receptor, alpha [synthetic construct]
gi|216409718|dbj|BAH02296.1| retinoid X receptor, alpha [Homo sapiens]
gi|325495497|gb|ADZ17354.1| retinoid X nuclear receptor alpha [Homo sapiens]
gi|380815422|gb|AFE79585.1| retinoic acid receptor RXR-alpha [Macaca mulatta]
gi|383420605|gb|AFH33516.1| retinoic acid receptor RXR-alpha [Macaca mulatta]
gi|226861|prf||1609194A retinoic acid receptor RXRalpha
Length = 462
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 110 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 169
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 170 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 204
>gi|410222730|gb|JAA08584.1| retinoid X receptor, alpha [Pan troglodytes]
gi|410251064|gb|JAA13499.1| retinoid X receptor, alpha [Pan troglodytes]
gi|410306614|gb|JAA31907.1| retinoid X receptor, alpha [Pan troglodytes]
gi|410353913|gb|JAA43560.1| retinoid X receptor, alpha [Pan troglodytes]
Length = 462
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 110 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 169
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 170 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 204
>gi|84579197|dbj|BAE73032.1| hypothetical protein [Macaca fascicularis]
Length = 462
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 110 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 169
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 170 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 204
>gi|292834|gb|AAA36763.1| TR3 orphan receptor [Homo sapiens]
gi|227762|prf||1710271A steroid receptor TR3
Length = 598
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 92/195 (47%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 164 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 221
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P TST A + P E
Sbjct: 222 ESYSMPTA---------------FPGLAPTSPHLEGSGILDTPV-TSTKARS-GAPGPSE 264
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 265 G---RCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|9931482|gb|AAG02188.1| retinoid-X-receptor [Cloning vector pFB-ERV]
Length = 472
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 120 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 179
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 180 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 214
>gi|984541|gb|AAA75332.1| steroidogenic factor 1, partial [Homo sapiens]
Length = 56
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/55 (87%), Positives = 49/55 (89%)
Query: 137 VSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCL 191
VSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCPFCRFQKCL
Sbjct: 1 VSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRFQKCL 55
>gi|296191131|ref|XP_002743523.1| PREDICTED: retinoic acid receptor RXR-alpha [Callithrix jacchus]
Length = 603
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 251 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 310
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 311 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 345
>gi|195351909|ref|XP_002042458.1| GM23314 [Drosophila sechellia]
gi|194124327|gb|EDW46370.1| GM23314 [Drosophila sechellia]
Length = 1075
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 5/91 (5%)
Query: 114 AATPEHPDTKEGI-----EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVA 168
A++P D + G +LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A
Sbjct: 725 ASSPASVDLQAGRLLQAPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLA 784
Query: 169 ERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
+++C +DK +R RC FCRFQKCL VGM EV
Sbjct: 785 DKNCPVDKRRRNRCQFCRFQKCLVVGMVKEV 815
>gi|113197752|gb|AAI21596.1| LOC779621 protein [Xenopus (Silurana) tropicalis]
Length = 452
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRT++ VYTC + C IDK QR RC +CR+Q
Sbjct: 128 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLVYTCRDTKDCLIDKRQRNRCQYCRYQ 187
Query: 189 KCLEVGMKLEVSSQ 202
KCL +GMK EV +
Sbjct: 188 KCLAMGMKREVQEE 201
>gi|61657903|ref|NP_113953.1| retinoic acid receptor RXR-gamma [Rattus norvegicus]
gi|81888393|sp|Q5BJR8.1|RXRG_RAT RecName: Full=Retinoic acid receptor RXR-gamma; AltName:
Full=Nuclear receptor subfamily 2 group B member 3;
AltName: Full=Retinoid X receptor gamma
gi|60551535|gb|AAH91363.1| Retinoid X receptor gamma [Rattus norvegicus]
gi|149058122|gb|EDM09279.1| retinoid X receptor gamma, isoform CRA_a [Rattus norvegicus]
Length = 463
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>gi|70907499|emb|CAH69897.1| retinoid X receptor [Blattella germanica]
Length = 413
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK
Sbjct: 84 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCIIDK 141
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 142 RQRNRCQYCRYQKCLSMGMKRE 163
>gi|70907501|emb|CAH69898.1| retinoid X receptor [Blattella germanica]
Length = 436
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK
Sbjct: 84 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCIIDK 141
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 142 RQRNRCQYCRYQKCLSMGMKRE 163
>gi|242016902|ref|XP_002428935.1| retinoid X receptor, putative [Pediculus humanus corporis]
gi|212513751|gb|EEB16197.1| retinoid X receptor, putative [Pediculus humanus corporis]
Length = 595
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A++SC +DK +R RC FCRF
Sbjct: 228 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKSCPVDKRRRNRCQFCRF 287
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 288 QKCLAVGMVKEV 299
>gi|930012|emb|CAA37459.1| chorion factor CF1 [Drosophila melanogaster]
Length = 280
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 79 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 136
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 137 RQRNRCQYCRYQKCLTCGMKREA 159
>gi|39645799|gb|AAH63827.1| RXRA protein [Homo sapiens]
Length = 516
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 164 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 223
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 224 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 258
>gi|3098334|gb|AAC15588.1| retinoid X receptor [Amblyomma americanum]
Length = 400
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER+C IDK QR RC +
Sbjct: 75 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREERTCIIDKRQRNRCQY 134
Query: 185 CRFQKCLEVGMKLEV 199
CR+QKCL GMK E
Sbjct: 135 CRYQKCLACGMKREA 149
>gi|358414696|ref|XP_887036.4| PREDICTED: retinoic acid receptor RXR-alpha isoform 4 [Bos taurus]
Length = 557
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 205 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 264
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 265 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 299
>gi|149039210|gb|EDL93430.1| retinoid X receptor alpha, isoform CRA_b [Rattus norvegicus]
Length = 439
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 87 PLGLNGVLKVPAHPSGNMSSFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 146
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 147 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 181
>gi|409178679|gb|AFV25505.1| ultraspiracle, partial [Drosophila santomea]
Length = 474
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 68 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 125
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 126 RQRNRCQYCRYQKCLTCGMKRE 147
>gi|194759963|ref|XP_001962211.1| GF14553 [Drosophila ananassae]
gi|190615908|gb|EDV31432.1| GF14553 [Drosophila ananassae]
Length = 1093
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R RC FCRF
Sbjct: 762 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRF 821
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 822 QKCLVVGMVKEV 833
>gi|6007621|gb|AAF00981.1|AF136372_1 RXR [Locusta migratoria]
Length = 389
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK
Sbjct: 77 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCIIDK 134
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 135 RQRNRCQYCRYQKCLAMGMKREA 157
>gi|326924824|ref|XP_003208625.1| PREDICTED: retinoic acid receptor RXR-gamma-like [Meleagris
gallopavo]
Length = 494
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G + +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 130 YPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 189
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 190 RQRNRCQYCRYQKCLAMGMKREA 212
>gi|195169483|ref|XP_002025551.1| GL15129 [Drosophila persimilis]
gi|194109030|gb|EDW31073.1| GL15129 [Drosophila persimilis]
Length = 359
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 82 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 139
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 140 RQRNRCQYCRYQKCLSCGMKREA 162
>gi|427796277|gb|JAA63590.1| Putative retinoid x receptor alpha a, partial [Rhipicephalus
pulchellus]
Length = 420
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 52/75 (69%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER C +DK QR RC +
Sbjct: 79 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERRCVVDKRQRNRCQY 138
Query: 185 CRFQKCLEVGMKLEV 199
CR+QKCL GMK E
Sbjct: 139 CRYQKCLACGMKREA 153
>gi|195477854|ref|XP_002100326.1| GE16988 [Drosophila yakuba]
gi|194187850|gb|EDX01434.1| GE16988 [Drosophila yakuba]
Length = 509
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 93 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 150
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 151 RQRNRCQYCRYQKCLTCGMKRE 172
>gi|40886675|gb|AAR96256.1| retinoid X receptor gamma [Sus scrofa]
Length = 431
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 94 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 153
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 154 RQRNRCQYCRYQKCLVMGMKRE 175
>gi|409178677|gb|AFV25504.1| ultraspiracle, partial [Drosophila teissieri]
Length = 472
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 66 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 123
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 124 RQRNRCQYCRYQKCLTCGMKRE 145
>gi|409178675|gb|AFV25503.1| ultraspiracle, partial [Drosophila mauritiana]
Length = 474
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 69 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 126
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 127 RQRNRCQYCRYQKCLTCGMKRE 148
>gi|395834948|ref|XP_003790447.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 2
[Otolemur garnettii]
Length = 610
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ L +GI P TS A + G E C VCGD S HYG+ TCE
Sbjct: 243 PGLAPTSPHLDGSGILDAPM-TSAKARS----GAPGGSEGRCAVCGDSASCQHYGVRTCE 297
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 298 GCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 348
>gi|354501950|ref|XP_003513051.1| PREDICTED: retinoic acid receptor RXR-alpha-like [Cricetulus
griseus]
gi|344245296|gb|EGW01400.1| Retinoic acid receptor RXR-alpha [Cricetulus griseus]
Length = 439
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 87 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 146
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 147 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 181
>gi|194878774|ref|XP_001974125.1| GG21557 [Drosophila erecta]
gi|190657312|gb|EDV54525.1| GG21557 [Drosophila erecta]
Length = 1136
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R RC FCRF
Sbjct: 805 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRF 864
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 865 QKCLVVGMVKEV 876
>gi|351702679|gb|EHB05598.1| Retinoic acid receptor RXR-gamma-A [Heterocephalus glaber]
Length = 616
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 187 PLGLNGVLKVPTHPSGNMAPFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 246
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 247 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 280
>gi|409178673|gb|AFV25502.1| ultraspiracle, partial [Drosophila simulans]
Length = 468
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 63 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 120
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 121 RQRNRCQYCRYQKCLTCGMKRE 142
>gi|344308765|ref|XP_003423047.1| PREDICTED: hypothetical protein LOC100674208 [Loxodonta africana]
Length = 1318
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 667 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 726
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 727 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 760
>gi|195046041|ref|XP_001992077.1| GH24408 [Drosophila grimshawi]
gi|193892918|gb|EDV91784.1| GH24408 [Drosophila grimshawi]
Length = 528
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 106 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 163
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 164 RQRNRCQYCRYQKCLSCGMKREA 186
>gi|8096|emb|CAA36827.1| unnamed protein product [Drosophila melanogaster]
Length = 507
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 93 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 150
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 151 RQRNRCQYCRYQKCLTCGMKRE 172
>gi|431898965|gb|ELK07335.1| Retinoic acid receptor RXR-alpha [Pteropus alecto]
Length = 439
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 87 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 146
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 147 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 181
>gi|1685271|gb|AAB36777.1| RXR alpha 2 [Mus musculus]
gi|1685273|gb|AAB36778.1| RXR alpha 3 [Mus musculus]
Length = 439
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 87 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 146
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 147 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 180
>gi|195434034|ref|XP_002065008.1| GK14909 [Drosophila willistoni]
gi|194161093|gb|EDW75994.1| GK14909 [Drosophila willistoni]
Length = 878
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R RC FCRF
Sbjct: 547 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRF 606
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 607 QKCLVVGMVKEV 618
>gi|395834946|ref|XP_003790446.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 1
[Otolemur garnettii]
gi|395834950|ref|XP_003790448.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 3
[Otolemur garnettii]
Length = 598
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ L +GI P TS A + G E C VCGD S HYG+ TCE
Sbjct: 231 PGLAPTSPHLDGSGILDAPM-TSAKARS----GAPGGSEGRCAVCGDSASCQHYGVRTCE 285
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 286 GCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 336
>gi|325930183|gb|ADZ45550.1| retinoid X receptor alpha [Taeniopygia guttata]
Length = 467
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 115 PLGLNGVLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 174
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 175 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 209
>gi|119608531|gb|EAW88125.1| retinoid X receptor, alpha, isoform CRA_c [Homo sapiens]
Length = 249
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 110 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 169
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 170 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 204
>gi|363740474|ref|XP_003642339.1| PREDICTED: retinoic acid receptor RXR-alpha [Gallus gallus]
Length = 467
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 115 PLGLNGVLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 174
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 175 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 209
>gi|449269065|gb|EMC79874.1| Retinoic acid receptor RXR-alpha, partial [Columba livia]
Length = 458
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 106 PLGLNGVLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 165
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 166 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 200
>gi|359070758|ref|XP_002691733.2| PREDICTED: retinoic acid receptor RXR-alpha [Bos taurus]
Length = 756
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 404 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 463
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 464 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 497
>gi|400270857|gb|AFP75252.1| retinoid X receptor, partial [Tupaia belangeri]
Length = 431
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 79 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 138
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 139 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 173
>gi|17137128|ref|NP_477119.1| hormone receptor-like in 38, isoform B [Drosophila melanogaster]
gi|7298701|gb|AAF53914.1| hormone receptor-like in 38, isoform B [Drosophila melanogaster]
Length = 1078
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R RC FCRF
Sbjct: 747 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRF 806
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 807 QKCLVVGMVKEV 818
>gi|395530718|ref|XP_003767435.1| PREDICTED: retinoic acid receptor RXR-gamma [Sarcophilus harrisii]
Length = 470
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 115 ATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
T +P T G + +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C
Sbjct: 129 GTMSYPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDC 188
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLE 198
IDK QR RC +CR+QKCL +GMK E
Sbjct: 189 LIDKRQRNRCQYCRYQKCLVMGMKRE 214
>gi|17136580|ref|NP_476781.1| ultraspiracle, isoform A [Drosophila melanogaster]
gi|442614874|ref|NP_001259168.1| ultraspiracle, isoform B [Drosophila melanogaster]
gi|137178|sp|P20153.1|USP_DROME RecName: Full=Protein ultraspiracle; AltName: Full=Chorion factor
1; AltName: Full=Nuclear receptor subfamily 2 group B
member 4; AltName: Full=XR2C
gi|103505|pir||S11513 usp protein - fruit fly (Drosophila sp.)
gi|8833|emb|CAA37496.1| unnamed protein product [Drosophila melanogaster]
gi|3676116|emb|CAA21122.1| EG:22E5.1 [Drosophila melanogaster]
gi|7290245|gb|AAF45707.1| ultraspiracle, isoform A [Drosophila melanogaster]
gi|17862122|gb|AAL39538.1| LD09973p [Drosophila melanogaster]
gi|220943484|gb|ACL84285.1| usp-PA [synthetic construct]
gi|220952764|gb|ACL88925.1| usp-PA [synthetic construct]
gi|440216351|gb|AGB95014.1| ultraspiracle, isoform B [Drosophila melanogaster]
gi|227126|prf||1614351A retinoid X receptor
Length = 508
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 93 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 150
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 151 RQRNRCQYCRYQKCLTCGMKRE 172
>gi|6671099|gb|AAF23095.1|AF165528_1 nuclear hormone receptor [Aedes aegypti]
Length = 545
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 55/78 (70%)
Query: 122 TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
T + +LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R R
Sbjct: 203 TPQSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNR 262
Query: 182 CPFCRFQKCLEVGMKLEV 199
C FCRFQKCL VGM EV
Sbjct: 263 CQFCRFQKCLAVGMVKEV 280
>gi|2780196|emb|CAA11109.1| retinoic acid X receptor gamma-1 [Rattus norvegicus]
Length = 322
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 47 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 106
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 107 RQRNRCQYCRYQKCLVMGMKRE 128
>gi|444730607|gb|ELW70985.1| Retinoic acid receptor RXR-gamma [Tupaia chinensis]
Length = 425
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ VYTC + C IDK
Sbjct: 88 YPSTSPGSLVKHVCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLVYTCRDSKDCLIDK 147
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 148 RQRNRCQYCRYQKCLVMGMKRE 169
>gi|390354650|ref|XP_784246.3| PREDICTED: retinoic acid receptor RXR [Strongylocentrotus
purpuratus]
Length = 479
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 53/70 (75%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C VCGD+ SG HYG+ +CE CKGFFKRTV+ YTC +R+C +DK QR RC +CR+Q
Sbjct: 159 ICAVCGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDDRNCMVDKRQRNRCQYCRYQ 218
Query: 189 KCLEVGMKLE 198
KCL +GM+ E
Sbjct: 219 KCLGMGMRRE 228
>gi|365176244|gb|AEW68002.1| retinoid X receptor [Halocynthia roretzi]
Length = 453
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 52/70 (74%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C VCGD+ SG HYG+ +CE CKGFFKRTV+ + YTC + C IDK QR RC +CR+Q
Sbjct: 101 ICAVCGDRASGKHYGVYSCEGCKGFFKRTVRKELTYTCRDSKDCVIDKRQRNRCQYCRYQ 160
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 161 KCLAMGMKRE 170
>gi|195347797|ref|XP_002040438.1| GM18927 [Drosophila sechellia]
gi|194121866|gb|EDW43909.1| GM18927 [Drosophila sechellia]
Length = 505
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 90 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 147
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 148 RQRNRCQYCRYQKCLTCGMKRE 169
>gi|3334657|emb|CAA05172.1| hormone receptor 38 [Drosophila melanogaster]
Length = 1073
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R RC FCRF
Sbjct: 742 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRF 801
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 802 QKCLVVGMVKEV 813
>gi|297685666|ref|XP_002820404.1| PREDICTED: retinoic acid receptor RXR-alpha-like, partial [Pongo
abelii]
Length = 199
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 100 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 159
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 160 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 193
>gi|12644294|sp|P49869.3|HR38_DROME RecName: Full=Probable nuclear hormone receptor HR38; Short=dHR38;
AltName: Full=Nuclear receptor subfamily 4 group A
member 4
Length = 1073
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R RC FCRF
Sbjct: 742 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRF 801
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 802 QKCLVVGMVKEV 813
>gi|312190941|gb|ADQ43369.1| ultraspiracle [Nezara viridula]
Length = 402
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ++ C +DK
Sbjct: 72 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKQCLVDK 129
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 130 RQRNRCQYCRYQKCLSMGMKRE 151
>gi|281348859|gb|EFB24443.1| hypothetical protein PANDA_002085 [Ailuropoda melanoleuca]
Length = 447
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 110 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLMYTCRDNKDCLIDK 169
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 170 RQRNRCQYCRYQKCLVMGMKRE 191
>gi|427777855|gb|JAA54379.1| Putative retinoid x receptor alpha a [Rhipicephalus pulchellus]
Length = 407
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 52/75 (69%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER C +DK QR RC +
Sbjct: 68 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERRCVVDKRQRNRCQY 127
Query: 185 CRFQKCLEVGMKLEV 199
CR+QKCL GMK E
Sbjct: 128 CRYQKCLACGMKREA 142
>gi|325930187|gb|ADZ45552.1| retinoid X receptor gamma [Taeniopygia guttata]
Length = 468
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G + +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 131 YPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 190
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 191 RQRNRCQYCRYQKCLAMGMKRE 212
>gi|47523566|ref|NP_999412.1| neuron-derived orphan receptor-1 alfa [Sus scrofa]
gi|3821743|emb|CAA09763.1| neuron-derived orphan receptor-1 alfa [Sus scrofa]
Length = 643
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 96 MDLSSAGISYHPFHTSTIAATPEHPD-----TKEGIEELCPVCGDKVSGYHYGLLTCESC 150
+ S G++ P +S + +P P T G E C VCGD + HYG+ TCE C
Sbjct: 271 LAFSPLGLTTSPTTSSLLGESPSLPSPPNRSTASG-EGTCAVCGDNAACQHYGVRTCEGC 329
Query: 151 KGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
KGFFKRTVQ Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 330 KGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEV 378
>gi|410986573|ref|XP_003999584.1| PREDICTED: retinoic acid receptor RXR-gamma [Felis catus]
Length = 463
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLMYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>gi|395506404|ref|XP_003757522.1| PREDICTED: retinoic acid receptor RXR-alpha [Sarcophilus harrisii]
Length = 468
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 107 PFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 116 PLGLNGVLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 175
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 176 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 209
>gi|195148572|ref|XP_002015247.1| GL19597 [Drosophila persimilis]
gi|194107200|gb|EDW29243.1| GL19597 [Drosophila persimilis]
Length = 1004
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 53/76 (69%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ +LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A++ C +DK +R RC
Sbjct: 769 QAASQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKMCPVDKRRRNRCQ 828
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM EV
Sbjct: 829 FCRFQKCLVVGMVKEV 844
>gi|195485831|ref|XP_002091251.1| GE13549 [Drosophila yakuba]
gi|194177352|gb|EDW90963.1| GE13549 [Drosophila yakuba]
Length = 1059
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R RC FCRF
Sbjct: 728 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRF 787
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 788 QKCLVVGMVKEV 799
>gi|3821745|emb|CAA09764.1| neuron-derived orphan receptor-1 beta [Sus scrofa]
Length = 446
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 96 MDLSSAGISYHPFHTSTIAATPEHPD-----TKEGIEELCPVCGDKVSGYHYGLLTCESC 150
+ S G++ P +S + +P P T G E C VCGD + HYG+ TCE C
Sbjct: 271 LAFSPLGLTTSPTTSSLLGESPSLPSPPNRSTASG-EGTCAVCGDNAACQHYGVRTCEGC 329
Query: 151 KGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
KGFFKRTVQ Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 330 KGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEV 378
>gi|403301502|ref|XP_003941427.1| PREDICTED: retinoic acid receptor RXR-alpha [Saimiri boliviensis
boliviensis]
Length = 365
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 13 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 72
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEVSSQ 202
TC + C IDK QR RC +CR+QKCL +GMK E +
Sbjct: 73 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQE 110
>gi|397503782|ref|XP_003822498.1| PREDICTED: retinoic acid receptor RXR-alpha-like [Pan paniscus]
gi|402896147|ref|XP_003911168.1| PREDICTED: retinoic acid receptor RXR-alpha-like [Papio anubis]
gi|410043384|ref|XP_520345.4| PREDICTED: retinoic acid receptor RXR-alpha [Pan troglodytes]
gi|193785958|dbj|BAG54745.1| unnamed protein product [Homo sapiens]
Length = 365
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 13 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 72
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEVSSQ 202
TC + C IDK QR RC +CR+QKCL +GMK E +
Sbjct: 73 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQE 110
>gi|241680439|ref|XP_002400899.1| retinoid X receptor, putative [Ixodes scapularis]
gi|215504293|gb|EEC13787.1| retinoid X receptor, putative [Ixodes scapularis]
Length = 594
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 51/72 (70%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A R C +DK +R RC FCRF
Sbjct: 258 QLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKGAKYVCLANRDCPVDKRRRNRCQFCRF 317
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 318 QKCLAVGMVKEV 329
>gi|449478039|ref|XP_002196179.2| PREDICTED: retinoic acid receptor RXR-alpha [Taeniopygia guttata]
Length = 439
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 107 PFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 87 PLGLNGVLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 146
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 147 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 180
>gi|426363508|ref|XP_004048881.1| PREDICTED: retinoic acid receptor RXR-alpha-like [Gorilla gorilla
gorilla]
Length = 365
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 13 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 72
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEVSSQ 202
TC + C IDK QR RC +CR+QKCL +GMK E +
Sbjct: 73 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQE 110
>gi|390432209|gb|AFL91696.1| retinoid X receptor isoform a [Azumapecten farreri]
Length = 446
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 57/91 (62%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P T + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK
Sbjct: 114 PHMPHTTLSSKHICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDDRNCVIDK 173
Query: 177 TQRKRCPFCRFQKCLEVGMKLEVSSQSTHGV 207
QR RC +CR+ KCL +GMK E + V
Sbjct: 174 RQRNRCQYCRYMKCLAMGMKREAVQEERQRV 204
>gi|296481981|tpg|DAA24096.1| TPA: retinoid X receptor, alpha [Bos taurus]
Length = 404
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 50 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 109
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 110 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 143
>gi|149410285|ref|XP_001506054.1| PREDICTED: retinoic acid receptor RXR-alpha-like [Ornithorhynchus
anatinus]
Length = 433
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 107 PFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 81 PLGLNGVLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 140
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 141 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 174
>gi|344266871|ref|XP_003405502.1| PREDICTED: nuclear receptor subfamily 4 group A member 1-like
[Loxodonta africana]
Length = 600
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ L +GI P + + G E C VCGD S HYG+ TCE
Sbjct: 231 PGLAPTSPHLDGSGILDVP-----VTSAKARSGAPSGSEGRCAVCGDNASCQHYGVRTCE 285
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 286 GCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 336
>gi|449268313|gb|EMC79183.1| Retinoic acid receptor RXR-gamma, partial [Columba livia]
Length = 451
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G + +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 114 YPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 173
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 174 RQRNRCQYCRYQKCLAMGMKRE 195
>gi|347967177|ref|XP_320944.5| AGAP002095-PA [Anopheles gambiae str. PEST]
gi|347967179|ref|XP_003436029.1| AGAP002095-PB [Anopheles gambiae str. PEST]
gi|347967181|ref|XP_003436030.1| AGAP002095-PD [Anopheles gambiae str. PEST]
gi|333469722|gb|EAA01003.6| AGAP002095-PA [Anopheles gambiae str. PEST]
gi|333469723|gb|EGK97383.1| AGAP002095-PB [Anopheles gambiae str. PEST]
gi|333469725|gb|EGK97385.1| AGAP002095-PD [Anopheles gambiae str. PEST]
Length = 515
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK
Sbjct: 155 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCTIDK 212
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 213 RQRNRCQYCRYQKCLACGMKRE 234
>gi|371940918|ref|NP_001243138.1| retinoic acid receptor RXR-gamma [Taeniopygia guttata]
Length = 468
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G + +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 131 YPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 190
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 191 RQRNRCQYCRYQKCLAMGMKRE 212
>gi|297269916|ref|XP_001118265.2| PREDICTED: retinoic acid receptor RXR-alpha, partial [Macaca
mulatta]
Length = 277
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 100 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 159
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEVS 200
TC + C IDK QR RC +CR+QKCL +GMK E S
Sbjct: 160 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREDS 195
>gi|444518523|gb|ELV12209.1| Retinoic acid receptor RXR-alpha [Tupaia chinensis]
Length = 386
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 88 SPGGGSTNMDLSSAGISYHPFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLL 145
SP S +SS+ P + + P HP + + +C +CGD+ SG HYG+
Sbjct: 15 SPQLSSPMNPVSSSEDVKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVY 74
Query: 146 TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
+CE CKGFFKRTV+ YTC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 75 SCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 127
>gi|426217053|ref|XP_004002768.1| PREDICTED: retinoic acid receptor RXR-gamma [Ovis aries]
Length = 463
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 120 PDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 127 PSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKR 186
Query: 178 QRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 187 QRNRCQYCRYQKCLVMGMKREA 208
>gi|301756739|ref|XP_002914218.1| PREDICTED: retinoic acid receptor RXR-gamma-like [Ailuropoda
melanoleuca]
Length = 463
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLMYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREA 208
>gi|198474923|ref|XP_001356865.2| GA15026 [Drosophila pseudoobscura pseudoobscura]
gi|198138606|gb|EAL33931.2| GA15026 [Drosophila pseudoobscura pseudoobscura]
Length = 1132
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 53/76 (69%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+ +LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A++ C +DK +R RC
Sbjct: 797 QAASQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKMCPVDKRRRNRCQ 856
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM EV
Sbjct: 857 FCRFQKCLVVGMVKEV 872
>gi|281365278|ref|NP_001163024.1| hormone receptor-like in 38, isoform D [Drosophila melanogaster]
gi|272407117|gb|ACZ94310.1| hormone receptor-like in 38, isoform D [Drosophila melanogaster]
Length = 836
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R RC FCRF
Sbjct: 505 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRF 564
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 565 QKCLVVGMVKEV 576
>gi|441623802|ref|XP_003279685.2| PREDICTED: retinoic acid receptor RXR-alpha [Nomascus leucogenys]
Length = 418
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 101 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 160
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 161 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 195
>gi|307188426|gb|EFN73183.1| Probable nuclear hormone receptor HR38 [Camponotus floridanus]
Length = 655
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R RC FCRF
Sbjct: 319 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRF 378
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 379 QKCLMVGMVKEV 390
>gi|348519741|ref|XP_003447388.1| PREDICTED: nuclear receptor subfamily 4 group A member 2-like
[Oreochromis niloticus]
Length = 598
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC FCR
Sbjct: 262 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQFCR 321
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 322 FQKCLVVGMVREV 334
>gi|347967175|ref|XP_003436028.1| AGAP002095-PC [Anopheles gambiae str. PEST]
gi|333469724|gb|EGK97384.1| AGAP002095-PC [Anopheles gambiae str. PEST]
Length = 484
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK
Sbjct: 124 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCTIDK 181
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 182 RQRNRCQYCRYQKCLACGMKRE 203
>gi|307202413|gb|EFN81833.1| Probable nuclear hormone receptor HR38 [Harpegnathos saltator]
Length = 428
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+AE++C +DK +R RC FCRF
Sbjct: 92 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKACPVDKRRRNRCQFCRF 151
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 152 QKCLVVGMVKEV 163
>gi|374711681|gb|AEZ64361.1| retinoid X receptor isoform B short [Diploptera punctata]
Length = 415
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK
Sbjct: 85 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCIIDK 142
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 143 RQRNRCQYCRYQKCLGMGMKRE 164
>gi|170061655|ref|XP_001866328.1| retinoid x receptor [Culex quinquefasciatus]
gi|167879792|gb|EDS43175.1| retinoid x receptor [Culex quinquefasciatus]
Length = 478
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK
Sbjct: 104 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCTIDK 161
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 162 RQRNRCQYCRYQKCLACGMKREA 184
>gi|393908770|gb|EJD75201.1| nuclear receptor subfamily 1 group D member 1 [Loa loa]
Length = 554
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 114 AATPEHPDTKEGIE-ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
+A +PDT G + LC VCGDK SG+HYG+ CE CKGFF+R++Q + Y C+ + C
Sbjct: 145 SADELYPDTSTGNKPALCKVCGDKSSGFHYGVTACEGCKGFFRRSIQKQMEYRCLRDGKC 204
Query: 173 HIDKTQRKRCPFCRFQKCLEVGM 195
HI + R RC FCRF+KCL VGM
Sbjct: 205 HIHRLNRNRCQFCRFRKCLAVGM 227
>gi|405953743|gb|EKC21345.1| Retinoic acid receptor RXR-alpha [Crassostrea gigas]
Length = 446
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%)
Query: 110 TSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
+S + P P + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +
Sbjct: 106 SSPPGSNPHMPHSNLNSKHICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDD 165
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLEVSSQSTHGV 207
R+C IDK QR RC +CR+ KCL +GMK E + V
Sbjct: 166 RNCIIDKRQRNRCQYCRYMKCLNMGMKREAVQEERQRV 203
>gi|374711677|gb|AEZ64359.1| retinoid X receptor isoform A short [Diploptera punctata]
Length = 437
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK
Sbjct: 107 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCIIDK 164
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 165 RQRNRCQYCRYQKCLGMGMKRE 186
>gi|313224753|emb|CBY20544.1| unnamed protein product [Oikopleura dioica]
Length = 625
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C IDK +R RC +CR
Sbjct: 242 EGLCAVCGDSAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPIDKRRRNRCQYCR 301
Query: 187 FQKCLEVGMKLEV 199
+QKCL VGM EV
Sbjct: 302 YQKCLAVGMVKEV 314
>gi|260828819|ref|XP_002609360.1| hypothetical protein BRAFLDRAFT_236165 [Branchiostoma floridae]
gi|229294716|gb|EEN65370.1| hypothetical protein BRAFLDRAFT_236165 [Branchiostoma floridae]
Length = 427
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 64/111 (57%), Gaps = 13/111 (11%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGI-EELCPVCGDKVSGYHYGLLTC 147
PG G DL HP + + TP G+ + +C +CGD+ SG HYG+ +C
Sbjct: 82 PGRGPFTYDLG------HPLQSPRPSQTPM------GLSKHICQICGDRASGKHYGVYSC 129
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
E CKGFFKRTV+ Y C R C IDK QR RC +CR+QKCL +GMK E
Sbjct: 130 EGCKGFFKRTVRKDLTYACRDNRDCVIDKRQRNRCQYCRYQKCLAMGMKRE 180
>gi|126297986|ref|XP_001372307.1| PREDICTED: retinoic acid receptor RXR-alpha-like [Monodelphis
domestica]
Length = 489
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 107 PFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 137 PLGLNGVLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 196
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 197 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREA 231
>gi|94733756|emb|CAK11469.1| retinoid x receptor, beta [Danio rerio]
Length = 487
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 53/73 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 138 KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCR 197
Query: 187 FQKCLEVGMKLEV 199
+QKCL +GMK EV
Sbjct: 198 YQKCLAMGMKREV 210
>gi|374711683|gb|AEZ64362.1| retinoid X receptor isoform B long [Diploptera punctata]
Length = 427
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK
Sbjct: 97 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCIIDK 154
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 155 RQRNRCQYCRYQKCLGMGMKRE 176
>gi|395540615|ref|XP_003772248.1| PREDICTED: nuclear receptor subfamily 4 group A member 1
[Sarcophilus harrisii]
Length = 599
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GTEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|6318676|gb|AAF06997.1|AF170551_1 nuclear hormone receptor [Onchocerca volvulus]
Length = 555
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 109 HTSTIAATPEHPDTKEGIE-ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCV 167
H +A +PD+ + LC VCGDK SG+HYG+ CE CKGFF+R++Q + Y C+
Sbjct: 140 HLRALATDELYPDSSTSNKPALCKVCGDKSSGFHYGVTACEGCKGFFRRSIQEQMEYRCL 199
Query: 168 AERSCHIDKTQRKRCPFCRFQKCLEVGM 195
+ CHI + R RC FCRF+KCL VGM
Sbjct: 200 RDGKCHIHRLNRNRCQFCRFRKCLAVGM 227
>gi|6601567|gb|AAF19033.1|AF210734_1 ultraspiracle [Aedes albopictus]
Length = 485
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK
Sbjct: 128 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCTIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 186 RQRNRCLYCRYQKCLACGMKREA 208
>gi|157132575|ref|XP_001656078.1| retinoid x receptor (rxr) [Aedes aegypti]
gi|108884373|gb|EAT48598.1| AAEL000395-PA [Aedes aegypti]
Length = 484
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK
Sbjct: 127 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCTIDK 184
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 185 RQRNRCQYCRYQKCLACGMKREA 207
>gi|340712555|ref|XP_003394822.1| PREDICTED: hypothetical protein LOC100650434 [Bombus terrestris]
Length = 604
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
I CP+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y C+ C + RK+CP C
Sbjct: 533 INTPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVVTRKKCPAC 592
Query: 186 RFQKCLEV 193
RF KCL +
Sbjct: 593 RFDKCLSM 600
>gi|432932501|ref|XP_004081770.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 [Oryzias
latipes]
Length = 598
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC FCR
Sbjct: 262 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQFCR 321
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 322 FQKCLVVGMVREV 334
>gi|10946383|gb|AAG24886.1|AF305213_1 ultraspiracle isoform-A [Aedes aegypti]
Length = 484
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK
Sbjct: 127 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCTIDK 184
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 185 RQRNRCQYCRYQKCLACGMKRE 206
>gi|12657450|emb|CAC27783.1| nuclear receptor related 1 [Oryzias latipes]
Length = 600
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC FCR
Sbjct: 262 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQFCR 321
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 322 FQKCLVVGMVREV 334
>gi|301772378|ref|XP_002921623.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor subfamily 4 group
A member 1-like [Ailuropoda melanoleuca]
Length = 579
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ L G+ P S+ A P EG C VCGD S HYG+ TCE
Sbjct: 225 PGLAPTSPHLEGPGVLDAP--VSSAKARSGAPGGSEG---RCAVCGDNASCQHYGVRTCE 279
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 280 GCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 330
>gi|390432211|gb|AFL91697.1| retinoid X receptor isoform b [Azumapecten farreri]
Length = 450
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P T + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK
Sbjct: 114 PHMPHTTLSSKHICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDDRNCVIDK 173
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+ KCL +GMK E
Sbjct: 174 RQRNRCQYCRYMKCLAMGMKRE 195
>gi|3098336|gb|AAC15589.1| retinoid X receptor [Amblyomma americanum]
Length = 414
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 52/75 (69%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C ER C +DK QR RC +
Sbjct: 77 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERRCVVDKRQRNRCQY 136
Query: 185 CRFQKCLEVGMKLEV 199
CR+QKCL GMK E
Sbjct: 137 CRYQKCLMCGMKREA 151
>gi|10946385|gb|AAG24887.1|AF305214_1 ultraspiracle isoform-B [Aedes aegypti]
gi|403182355|gb|EJY57333.1| AAEL000395-PB [Aedes aegypti]
Length = 459
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK
Sbjct: 102 PNHPLS--GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCTIDK 159
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 160 RQRNRCQYCRYQKCLACGMKREA 182
>gi|390432213|gb|AFL91698.1| retinoid X receptor isoform c [Azumapecten farreri]
Length = 466
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P T + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK
Sbjct: 114 PHMPHTTLSSKHICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDDRNCVIDK 173
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+ KCL +GMK E
Sbjct: 174 RQRNRCQYCRYMKCLAMGMKRE 195
>gi|344286664|ref|XP_003415077.1| PREDICTED: retinoic acid receptor RXR-gamma-like [Loxodonta
africana]
Length = 489
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK QR RC +C
Sbjct: 161 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYC 220
Query: 186 RFQKCLEVGMKLE 198
R+QKCL +GMK E
Sbjct: 221 RYQKCLVMGMKRE 233
>gi|301611491|ref|XP_002935274.1| PREDICTED: retinoic acid receptor RXR-alpha-like [Xenopus
(Silurana) tropicalis]
Length = 459
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 113 IAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 170
I P HP + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC +
Sbjct: 113 ILKVPAHPSGPMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSK 172
Query: 171 SCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C IDK QR RC +CR+QKCL +GMK E
Sbjct: 173 DCMIDKRQRNRCQYCRYQKCLAMGMKREA 201
>gi|1710810|sp|P51129.1|RXRG_XENLA RecName: Full=Retinoic acid receptor RXR-gamma; AltName:
Full=Nuclear receptor subfamily 2 group B member 3;
AltName: Full=Retinoid X receptor gamma
Length = 470
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRT++ VYTC + C IDK QR RC +CR+Q
Sbjct: 145 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLVYTCRDSKDCLIDKRQRNRCQYCRYQ 204
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 205 KCLAMGMKREA 215
>gi|358251510|gb|AEU04704.1| retinoid X receptor beta [Lateolabrax japonicus]
Length = 444
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 87/166 (52%), Gaps = 15/166 (9%)
Query: 40 AQTPQMQHSNNDTQS-----SQLSPMLGNNTSASAGGAGYNFNNMVDNSYLFQSPGGGST 94
+Q P SN+ T S +SP L + + + G G N+ + +S S+
Sbjct: 3 SQQPNSSASNSPTNILGSPFSVISPSLNSPVVSPSLGFGPISNSQISSSEPISGMHSISS 62
Query: 95 NMDLSSA-GISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGF 153
+ D+ G+ P H+ I + + LC +CGD+ SG HYG+ +CE CKGF
Sbjct: 63 SEDIKPPFGLRPMPAHSPGIMLSQKR---------LCVICGDRSSGKHYGVYSCEGCKGF 113
Query: 154 FKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
FKRTV+ YTC + C +DK QR RC +CR+QKCL +GMK EV
Sbjct: 114 FKRTVRKDLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREV 159
>gi|348508024|ref|XP_003441555.1| PREDICTED: nuclear receptor subfamily 4 group A member 1-like
isoform 2 [Oreochromis niloticus]
Length = 598
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 118 EHPDTKEGI------------EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
E P T EG E C VCGD S HYG+ TCE CKGFFKRTVQ Y
Sbjct: 231 ESPKTAEGAMMSPKTPNPGSSESRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYV 290
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 291 CLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 324
>gi|348508022|ref|XP_003441554.1| PREDICTED: nuclear receptor subfamily 4 group A member 1-like
isoform 1 [Oreochromis niloticus]
Length = 592
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 118 EHPDTKEGI------------EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
E P T EG E C VCGD S HYG+ TCE CKGFFKRTVQ Y
Sbjct: 231 ESPKTAEGAMMSPKTPNPGSSESRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYV 290
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 291 CLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 324
>gi|390432215|gb|AFL91699.1| retinoid X receptor isoform d [Azumapecten farreri]
Length = 470
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P P T + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK
Sbjct: 114 PHMPHTTLSSKHICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDDRNCVIDK 173
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+ KCL +GMK E
Sbjct: 174 RQRNRCQYCRYMKCLAMGMKRE 195
>gi|147902511|ref|NP_001088948.1| retinoid X receptor, gamma [Xenopus laevis]
gi|57032681|gb|AAH88915.1| LOC496325 protein [Xenopus laevis]
Length = 470
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRT++ VYTC + C IDK QR RC +CR+Q
Sbjct: 145 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLVYTCRDSKDCLIDKRQRNRCQYCRYQ 204
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 205 KCLAMGMKREA 215
>gi|291389177|ref|XP_002711239.1| PREDICTED: nuclear receptor subfamily 4, group A, member 1
[Oryctolagus cuniculus]
Length = 590
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 73/145 (50%), Gaps = 19/145 (13%)
Query: 55 SQLSPMLGNNTSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIA 114
SQ +P LG S A + PG T+ L +G+ P ++
Sbjct: 211 SQATPQLGEGEGYSVPAAAF--------------PGLVPTSPHLDGSGMLDAP--ATSAK 254
Query: 115 ATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHI 174
A P EG C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +
Sbjct: 255 ARSGAPGGSEG---RCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLATKDCPV 311
Query: 175 DKTQRKRCPFCRFQKCLEVGMKLEV 199
DK +R RC FCRFQKCL VGM EV
Sbjct: 312 DKRRRNRCQFCRFQKCLAVGMVKEV 336
>gi|52783388|sp|Q7SYN5.1|RXRBA_DANRE RecName: Full=Retinoic acid receptor RXR-beta-A; AltName:
Full=Nuclear receptor subfamily 2 group B member 2-A;
AltName: Full=Retinoid X receptor beta-A
gi|32451843|gb|AAH54649.1| Rxrba protein [Danio rerio]
Length = 471
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 53/73 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 122 KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCR 181
Query: 187 FQKCLEVGMKLEV 199
+QKCL +GMK EV
Sbjct: 182 YQKCLAMGMKREV 194
>gi|148237103|ref|NP_001089591.1| uncharacterized protein LOC734648 [Xenopus laevis]
gi|68533768|gb|AAH99024.1| MGC115510 protein [Xenopus laevis]
Length = 471
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 53/77 (68%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRT++ YTC + C IDK QR RC +CR+Q
Sbjct: 146 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLFYTCRDSKDCLIDKRQRNRCQYCRYQ 205
Query: 189 KCLEVGMKLEVSSQSTH 205
KCL +GMK E + H
Sbjct: 206 KCLAMGMKREAVQEERH 222
>gi|348518115|ref|XP_003446577.1| PREDICTED: nuclear receptor subfamily 4 group A member 2-like
[Oreochromis niloticus]
Length = 581
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 105 YHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
+H T +A P + EG+ C VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 226 HHFMEYQTSSAPGRGPLSSEGV---CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKY 282
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A +SC +DK +R RC +CRFQKCL VGM EV
Sbjct: 283 VCLAAKSCPVDKRRRNRCQYCRFQKCLAVGMVKEV 317
>gi|139948543|ref|NP_001077109.1| retinoic acid receptor RXR-beta [Bos taurus]
gi|63169170|gb|AAY34706.1| retinoid X receptor beta [Bos taurus]
Length = 532
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRT++ Y+C + C +DK QR RC +CR
Sbjct: 201 KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCR 260
Query: 187 FQKCLEVGMKLEVSSQSTHG 206
+QKCL GMK E + HG
Sbjct: 261 YQKCLATGMKREAVQEERHG 280
>gi|242019559|ref|XP_002430228.1| Ecdysone receptor, putative [Pediculus humanus corporis]
gi|212515324|gb|EEB17490.1| Ecdysone receptor, putative [Pediculus humanus corporis]
Length = 520
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 57 LSPMLGNNTSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAAT 116
L+P G + + GY+ + M SY SP G DLS G S + + + +
Sbjct: 81 LTPSPGPHNQYTVISNGYS-SPMSSGSYDPYSPNGKLGREDLSPPG-SLNGYSVDSSDSK 138
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+ T EELC VCGD+ SGYHY LTCE CKGFF+R++ VY C SC ID
Sbjct: 139 KKKGPTPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGDSCEIDM 198
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
R++C CR +KCL VGM+ E
Sbjct: 199 YMRRKCQECRLKKCLSVGMRPE 220
>gi|224486327|gb|ACN51930.1| ultraspiracle [Daphnia magna]
gi|224486329|gb|ACN51931.1| ultraspiracle [Daphnia magna]
gi|224486331|gb|ACN51932.1| ultraspiracle [Daphnia magna]
gi|224486333|gb|ACN51933.1| ultraspiracle [Daphnia magna]
gi|224486335|gb|ACN51934.1| ultraspiracle [Daphnia magna]
gi|224486337|gb|ACN51935.1| ultraspiracle [Daphnia magna]
gi|224486341|gb|ACN51937.1| ultraspiracle [Daphnia magna]
gi|224486343|gb|ACN51938.1| ultraspiracle [Daphnia magna]
gi|224486345|gb|ACN51939.1| ultraspiracle [Daphnia magna]
Length = 120
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R C IDK
Sbjct: 6 PNHPLSNS--KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRQCLIDK 63
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL++GMK E
Sbjct: 64 RQRNRCQYCRYQKCLQMGMKREA 86
>gi|50345002|ref|NP_001002173.1| nuclear receptor subfamily 4 group A member 1 [Danio rerio]
gi|49256697|gb|AAH74092.1| Nuclear receptor subfamily 4, group A, member 1 [Danio rerio]
gi|182889142|gb|AAI64696.1| Nr4a1 protein [Danio rerio]
Length = 574
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 234 GNEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRRRNRCQF 293
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 294 CRFQKCLAVGMVKEV 308
>gi|228480295|ref|NP_001153203.1| retinoic acid receptor RXR-gamma isoform 2 [Mus musculus]
gi|386369|gb|AAB27245.1| retinoid-X receptor-gamma isoform 2 [Mus sp.]
Length = 340
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 3 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 62
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 63 RQRNRCQYCRYQKCLVMGMKRE 84
>gi|291397512|ref|XP_002715914.1| PREDICTED: retinoid X receptor gamma [Oryctolagus cuniculus]
gi|262263191|dbj|BAI48098.1| retinoid X receptor, gamma [Sus scrofa]
Length = 340
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 3 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 62
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 63 RQRNRCQYCRYQKCLVMGMKRE 84
>gi|348502792|ref|XP_003438951.1| PREDICTED: nuclear receptor subfamily 4 group A member 1-like
[Oreochromis niloticus]
Length = 575
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 52/75 (69%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S +HYG+ TCE CKGFFKRTVQ Y C++ + C +DK +R RC F
Sbjct: 235 GNEGCCAVCGDNASCHHYGVRTCEGCKGFFKRTVQKNSKYVCLSNKECPVDKRRRNRCQF 294
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 295 CRFQKCLAVGMVREV 309
>gi|1710719|sp|P51128.1|RXRA_XENLA RecName: Full=Retinoic acid receptor RXR-alpha; AltName:
Full=Nuclear receptor subfamily 2 group B member 1;
AltName: Full=Retinoid X receptor alpha
Length = 488
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 113 IAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 170
I P HP + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC +
Sbjct: 142 ILKVPMHPSGAMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSK 201
Query: 171 SCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C IDK QR RC +CR+QKCL +GMK E
Sbjct: 202 DCMIDKRQRNRCQYCRYQKCLAMGMKREA 230
>gi|224486339|gb|ACN51936.1| ultraspiracle [Daphnia magna]
Length = 111
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R C IDK
Sbjct: 1 PNHPLSNS--KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRQCLIDK 58
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL++GMK E
Sbjct: 59 RQRNRCQYCRYQKCLQMGMKREA 81
>gi|375151577|ref|NP_001243499.1| retinoic acid receptor RXR-gamma isoform c [Homo sapiens]
gi|375151581|ref|NP_001243500.1| retinoic acid receptor RXR-gamma isoform c [Homo sapiens]
gi|410034069|ref|XP_003949681.1| PREDICTED: retinoic acid receptor RXR-gamma [Pan troglodytes]
gi|410034071|ref|XP_003949682.1| PREDICTED: retinoic acid receptor RXR-gamma [Pan troglodytes]
Length = 340
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 3 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 62
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 63 RQRNRCQYCRYQKCLVMGMKRE 84
>gi|47060283|gb|AAT09760.1| neural orphan nuclear receptor Nur77 [Danio rerio]
Length = 580
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 234 GNEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRRRNRCQF 293
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 294 CRFQKCLAVGMVKEV 308
>gi|24308520|ref|NP_571350.1| retinoic acid receptor RXR-beta-A [Danio rerio]
gi|1046299|gb|AAC59722.1| retinoid X receptor epsilon [Danio rerio]
gi|94733758|emb|CAK11471.1| retinoid x receptor, beta [Danio rerio]
gi|1583307|prf||2120366B retinoid X receptor:ISOTYPE=epsilon
Length = 438
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 53/73 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 89 KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCR 148
Query: 187 FQKCLEVGMKLEV 199
+QKCL +GMK EV
Sbjct: 149 YQKCLAMGMKREV 161
>gi|343113489|gb|AEL87703.1| retinoid X receptor alpha [Strongylocentrotus nudus]
Length = 481
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 53/70 (75%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C VCGD+ SG HYG+ +CE CKGFFKRTV+ YTC +R+C +DK QR RC +CR+Q
Sbjct: 161 ICAVCGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDDRNCMVDKRQRNRCQYCRYQ 220
Query: 189 KCLEVGMKLE 198
KC+ +GM+ E
Sbjct: 221 KCIGMGMRRE 230
>gi|76253902|ref|NP_001028892.1| nuclear receptor subfamily 6 group A member 1-B [Danio rerio]
gi|82225956|sp|Q4V8R7.1|GCNFB_DANRE RecName: Full=Nuclear receptor subfamily 6 group A member 1-B;
AltName: Full=Germ cell nuclear factor B; Short=GCNF-B
gi|66910516|gb|AAH97237.1| Nuclear receptor subfamily 6, group A, member 1b [Danio rerio]
Length = 455
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 57/75 (76%)
Query: 121 DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK 180
+T +G E C +CGD+ SG HYG+++CE CKGFFKR++ NK++Y C +++C + + QR
Sbjct: 32 ETDDGGERWCLICGDRASGLHYGIISCEGCKGFFKRSICNKRIYRCNRDKNCQMSRKQRN 91
Query: 181 RCPFCRFQKCLEVGM 195
RC +CR QKCL++GM
Sbjct: 92 RCQYCRLQKCLQMGM 106
>gi|194864116|ref|XP_001970778.1| GG10830 [Drosophila erecta]
gi|190662645|gb|EDV59837.1| GG10830 [Drosophila erecta]
Length = 854
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 74 YNFNN-----MVDNSYLFQSPGGGSTNMDLS-SAGISYHPFHTSTIAATPEHPDTKEGIE 127
YN +N M SY SP G + DLS S+ ++ + + S A + E
Sbjct: 174 YNMSNGYASPMSAGSYDPYSPTGKTGRDDLSPSSSLNGYSANESCDAKKSKKGPAPRVQE 233
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
ELC VCGD+ SGYHY LTCE CKGFF+R+V K +Y C R+C +D R++C CR
Sbjct: 234 ELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKKAMYCCKFGRACEMDMYMRRKCQECRL 293
Query: 188 QKCLEVGMKLE 198
+KCL VGM+ E
Sbjct: 294 KKCLAVGMRPE 304
>gi|194212001|ref|XP_001504414.2| PREDICTED: nuclear receptor subfamily 4 group A member 1-like
isoform 1 [Equus caballus]
Length = 593
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 257 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 316
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 317 CRFQKCLAVGMVKEV 331
>gi|444521917|gb|ELV13238.1| Nuclear receptor subfamily 4 group A member 1 [Tupaia chinensis]
Length = 598
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|410964465|ref|XP_003988775.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 1
[Felis catus]
gi|410964467|ref|XP_003988776.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 2
[Felis catus]
Length = 598
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|291231311|ref|XP_002735608.1| PREDICTED: nuclear receptor subfamily 4, group A, member 2-like
[Saccoglossus kowalevskii]
Length = 827
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 107 PFHTSTIAATPEHPDTKE----GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKK 162
P H T+ P T + G E C VCGD + HYG+ TCE CKGFFKRTVQ
Sbjct: 464 PMHHGTMKDITPLPSTSQRNSPGQEGTCAVCGDSAACQHYGVRTCEGCKGFFKRTVQKHA 523
Query: 163 VYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
Y C+A ++C +DK +R RC FCRFQKCL GM EV
Sbjct: 524 KYVCLANKNCPVDKRRRNRCQFCRFQKCLASGMVKEV 560
>gi|50979006|ref|NP_001003227.1| nuclear receptor subfamily 4 group A member 1 [Canis lupus
familiaris]
gi|1709262|sp|P51666.1|NR4A1_CANFA RecName: Full=Nuclear receptor subfamily 4 group A member 1;
AltName: Full=Orphan nuclear receptor HMR; AltName:
Full=Orphan nuclear receptor NGFI-B
gi|1279347|emb|CAA65863.1| orphan nuclear receptor [Canis lupus familiaris]
Length = 598
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|197941310|gb|ACH78359.1| retinoid X receptor beta, partial [Sebastiscus marmoratus]
Length = 450
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 55/83 (66%)
Query: 116 TPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHID 175
+P P + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +D
Sbjct: 113 SPHSPGPMLSQKRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLVD 172
Query: 176 KTQRKRCPFCRFQKCLEVGMKLE 198
K QR RC +CR+QKCL +GMK E
Sbjct: 173 KRQRNRCQYCRYQKCLAMGMKRE 195
>gi|443688986|gb|ELT91508.1| hypothetical protein CAPTEDRAFT_153528 [Capitella teleta]
Length = 389
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+CP+C DK+SGYHYG TCESCKGFFKRTVQNKK++ C + C I + RK+CP CR++
Sbjct: 1 MCPICSDKISGYHYGTYTCESCKGFFKRTVQNKKMFVCHRKGDCAITMSNRKKCPACRYR 60
Query: 189 KCLEVGMKLE 198
CL GM++E
Sbjct: 61 LCLSHGMRVE 70
>gi|432859925|ref|XP_004069304.1| PREDICTED: nuclear receptor subfamily 4 group A member 1-like
[Oryzias latipes]
Length = 585
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Query: 107 PFHTSTIAATPEHPD--TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + +P+ P+ T EG C VCGD S HYG+ TCE CKGFFKRTVQ Y
Sbjct: 226 PRMVEAVMMSPKTPNSGTNEG---HCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKY 282
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 283 VCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 317
>gi|431921666|gb|ELK19018.1| Nuclear receptor subfamily 4 group A member 1 [Pteropus alecto]
Length = 598
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|402594809|gb|EJW88735.1| thyroid hormone receptor beta [Wuchereria bancrofti]
Length = 598
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EELC VCGDK SGYHY LTCE CKGFF+R+V K +Y C SC ID R++C CR
Sbjct: 191 EELCLVCGDKASGYHYNALTCEGCKGFFRRSVTRKAIYHCKYGESCDIDMYMRRKCQHCR 250
Query: 187 FQKCLEVGMKLE-VSSQSTHGVVVI 210
+KC+E+GM+ E + + S +VVI
Sbjct: 251 LKKCMEIGMRPERLRADSRVPLVVI 275
>gi|410920101|ref|XP_003973522.1| PREDICTED: nuclear receptor subfamily 4 group A member 1-like
[Takifugu rubripes]
Length = 625
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC F
Sbjct: 283 ATESRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQF 342
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 343 CRFQKCLAVGMVKEV 357
>gi|194768727|ref|XP_001966463.1| GF21986 [Drosophila ananassae]
gi|190617227|gb|EDV32751.1| GF21986 [Drosophila ananassae]
Length = 512
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 95 PNHPLSNS--KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 152
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +CR+QKCL GMK E
Sbjct: 153 RQRNRCQYCRYQKCLTCGMKREA 175
>gi|288187180|gb|ADC42111.1| ecdysone receptor isoform A [Dirofilaria immitis]
gi|288187186|gb|ADC42114.1| ecdysone receptor isoform A [Dirofilaria immitis]
Length = 672
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EELC VCGDK SGYHY LTCE CKGFF+R+V K +Y C SC ID R++C CR
Sbjct: 249 EELCLVCGDKASGYHYNALTCEGCKGFFRRSVTRKAIYHCKYGESCDIDMYMRRKCQHCR 308
Query: 187 FQKCLEVGMKLE-VSSQSTHGVVVI 210
+KC+E+GM+ E + + S +VVI
Sbjct: 309 LKKCMEIGMRPERLRADSRVPLVVI 333
>gi|195580475|ref|XP_002080061.1| GD21688 [Drosophila simulans]
gi|194192070|gb|EDX05646.1| GD21688 [Drosophila simulans]
Length = 556
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R RC FCRF
Sbjct: 225 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRF 284
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 285 QKCLVVGMVKEV 296
>gi|1036837|gb|AAC46926.1| DHR38, partial [Drosophila melanogaster]
Length = 546
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R RC FCRF
Sbjct: 215 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRF 274
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 275 QKCLVVGMVKEV 286
>gi|288187182|gb|ADC42112.1| ecdysone receptor isoform B [Dirofilaria immitis]
gi|288187187|gb|ADC42115.1| ecdysone receptor isoform B [Dirofilaria immitis]
Length = 662
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EELC VCGDK SGYHY LTCE CKGFF+R+V K +Y C SC ID R++C CR
Sbjct: 249 EELCLVCGDKASGYHYNALTCEGCKGFFRRSVTRKAIYHCKYGESCDIDMYMRRKCQHCR 308
Query: 187 FQKCLEVGMKLEV 199
+KC+E+GM+ E+
Sbjct: 309 LKKCMEIGMRPEL 321
>gi|2052391|gb|AAC53154.1| steroid/thyroid hormone orphan nuclear receptor [Mus musculus]
Length = 455
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|440896105|gb|ELR48130.1| Nuclear receptor subfamily 4 group A member 1, partial [Bos
grunniens mutus]
Length = 605
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 269 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 328
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 329 CRFQKCLAVGMVKEV 343
>gi|73476625|gb|AAZ76385.1| nuclear receptor subfamily 4 group A member 2 variant NURR1a
[Rattus norvegicus]
Length = 455
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|14624971|gb|AAG01569.1| ultraspiracle protein [Lucilia cuprina]
Length = 467
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 53/75 (70%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK QR RC +
Sbjct: 85 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRNCIIDKRQRNRCQY 144
Query: 185 CRFQKCLEVGMKLEV 199
CR+QKCL GMK E
Sbjct: 145 CRYQKCLACGMKREA 159
>gi|296211713|ref|XP_002752535.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 1
[Callithrix jacchus]
gi|390467657|ref|XP_003733799.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 2
[Callithrix jacchus]
Length = 598
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|115497502|ref|NP_001069379.1| nuclear receptor subfamily 4 group A member 1 [Bos taurus]
gi|122142352|sp|Q0V8F0.1|NR4A1_BOVIN RecName: Full=Nuclear receptor subfamily 4 group A member 1
gi|110332005|gb|ABG67108.1| nuclear receptor subfamily 4, group A, member 1 [Bos taurus]
gi|296487863|tpg|DAA29976.1| TPA: nuclear receptor subfamily 4 group A member 1 [Bos taurus]
Length = 598
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|146400031|gb|ABQ28713.1| ecdysone receptor isoform A [Brugia malayi]
Length = 597
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EELC VCGDK SGYHY LTCE CKGFF+R+V K +Y C SC ID R++C CR
Sbjct: 191 EELCLVCGDKASGYHYNALTCEGCKGFFRRSVTRKAIYHCKYGESCDIDMYMRRKCQHCR 250
Query: 187 FQKCLEVGMKLE-VSSQSTHGVVVI 210
+KC+E+GM+ E + + S +VVI
Sbjct: 251 LKKCMEIGMRPERLRADSRVPLVVI 275
>gi|83638436|gb|ABC33911.1| retinoid X receptor alpha transcript variant 1 [Sus scrofa]
Length = 374
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 107 PFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + + +C +CGD+ SG HYG+ +CE CKGFFKRT + Y
Sbjct: 22 PLGINGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTARKDLTY 81
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEVSSQ 202
TC + C IDK QR RC +CR+QKCL +GMK E +
Sbjct: 82 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQE 119
>gi|432112627|gb|ELK35343.1| Nuclear receptor subfamily 4 group A member 1 [Myotis davidii]
Length = 598
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|18447420|gb|AAL68274.1| RE16656p [Drosophila melanogaster]
Length = 872
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 73/131 (55%), Gaps = 6/131 (4%)
Query: 74 YNFNN-----MVDNSYLFQSPGGGSTNMDLS-SAGISYHPFHTSTIAATPEHPDTKEGIE 127
YN +N M SY SP G + DLS S+ ++ + + S A + E
Sbjct: 173 YNMSNGYASPMSAGSYDPYSPTGKTGRDDLSPSSSLNGYSANESCDAKKSKKGPAPRVQE 232
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
ELC VCGD+ SGYHY LTCE CKGFF+R+V VY C R+C +D R++C CR
Sbjct: 233 ELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRL 292
Query: 188 QKCLEVGMKLE 198
+KCL VGM+ E
Sbjct: 293 KKCLAVGMRPE 303
>gi|1708293|sp|P49870.1|HR38_BOMMO RecName: Full=Probable nuclear hormone receptor HR38; Short=bHR38;
AltName: Full=Nuclear receptor subfamily 4 group A
member 4
gi|929003|emb|CAA61535.1| BHR38 [Bombyx mori]
Length = 360
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 62/101 (61%), Gaps = 8/101 (7%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
SS G++ P + A P P +LC VCGD + HYG+ TCE CKGFFKRTV
Sbjct: 3 SSPGVA--PADNTGPRAAPSSP------SQLCAVCGDTAACQHYGVRTCEGCKGFFKRTV 54
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
Q Y C+AE+SC +DK +R RC FC FQKCL VGM EV
Sbjct: 55 QKGSKYVCLAEKSCPVDKRRRNRCQFCWFQKCLAVGMVKEV 95
>gi|417411882|gb|JAA52360.1| Putative nuclear receptor of the nerve growth factor-induced
protein b type, partial [Desmodus rotundus]
Length = 600
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 264 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 323
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 324 CRFQKCLAVGMVKEV 338
>gi|403296687|ref|XP_003939229.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 3
[Saimiri boliviensis boliviensis]
Length = 639
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 303 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 362
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 363 CRFQKCLAVGMVKEV 377
>gi|409178665|gb|AFV25498.1| ultraspiracle, partial [Drosophila limbata]
Length = 442
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 52/74 (70%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK QR RC +
Sbjct: 62 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQY 121
Query: 185 CRFQKCLEVGMKLE 198
CR+QKCL GMK E
Sbjct: 122 CRYQKCLSCGMKRE 135
>gi|334321961|ref|XP_001370409.2| PREDICTED: retinoic acid receptor RXR-gamma-like [Monodelphis
domestica]
Length = 473
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK QR RC +CR+Q
Sbjct: 148 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQ 207
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 208 KCLVMGMKRE 217
>gi|372293389|gb|AEX92628.1| ultraspiracle, partial [Daphnia magna]
gi|372293391|gb|AEX92629.1| ultraspiracle, partial [Daphnia magna]
gi|372293393|gb|AEX92630.1| ultraspiracle, partial [Daphnia magna]
gi|372293395|gb|AEX92631.1| ultraspiracle, partial [Daphnia magna]
gi|372293397|gb|AEX92632.1| ultraspiracle, partial [Daphnia magna]
gi|372293399|gb|AEX92633.1| ultraspiracle, partial [Daphnia magna]
gi|372293401|gb|AEX92634.1| ultraspiracle, partial [Daphnia magna]
gi|372293403|gb|AEX92635.1| ultraspiracle, partial [Daphnia magna]
gi|372293405|gb|AEX92636.1| ultraspiracle, partial [Daphnia magna]
gi|372293407|gb|AEX92637.1| ultraspiracle, partial [Daphnia magna]
gi|372293409|gb|AEX92638.1| ultraspiracle, partial [Daphnia magna]
gi|372293411|gb|AEX92639.1| ultraspiracle, partial [Daphnia magna]
gi|372293413|gb|AEX92640.1| ultraspiracle, partial [Daphnia magna]
gi|372293415|gb|AEX92641.1| ultraspiracle, partial [Daphnia magna]
gi|372293417|gb|AEX92642.1| ultraspiracle, partial [Daphnia magna]
gi|372293419|gb|AEX92643.1| ultraspiracle, partial [Daphnia magna]
gi|372293421|gb|AEX92644.1| ultraspiracle, partial [Daphnia magna]
gi|372293423|gb|AEX92645.1| ultraspiracle, partial [Daphnia magna]
gi|372293425|gb|AEX92646.1| ultraspiracle, partial [Daphnia magna]
gi|372293427|gb|AEX92647.1| ultraspiracle, partial [Daphnia magna]
gi|372293429|gb|AEX92648.1| ultraspiracle, partial [Daphnia magna]
gi|372293431|gb|AEX92649.1| ultraspiracle, partial [Daphnia magna]
gi|372293433|gb|AEX92650.1| ultraspiracle, partial [Daphnia magna]
gi|372293435|gb|AEX92651.1| ultraspiracle, partial [Daphnia magna]
gi|372293437|gb|AEX92652.1| ultraspiracle, partial [Daphnia magna]
gi|372293439|gb|AEX92653.1| ultraspiracle, partial [Daphnia magna]
gi|372293441|gb|AEX92654.1| ultraspiracle, partial [Daphnia magna]
gi|372293443|gb|AEX92655.1| ultraspiracle, partial [Daphnia magna]
gi|372293445|gb|AEX92656.1| ultraspiracle, partial [Daphnia magna]
gi|372293447|gb|AEX92657.1| ultraspiracle, partial [Daphnia magna]
gi|372293449|gb|AEX92658.1| ultraspiracle, partial [Daphnia magna]
gi|372293451|gb|AEX92659.1| ultraspiracle, partial [Daphnia magna]
gi|372293453|gb|AEX92660.1| ultraspiracle, partial [Daphnia magna]
gi|372293455|gb|AEX92661.1| ultraspiracle, partial [Daphnia magna]
gi|372293457|gb|AEX92662.1| ultraspiracle, partial [Daphnia magna]
gi|372293459|gb|AEX92663.1| ultraspiracle, partial [Daphnia magna]
gi|372293461|gb|AEX92664.1| ultraspiracle, partial [Daphnia magna]
gi|372293463|gb|AEX92665.1| ultraspiracle, partial [Daphnia magna]
gi|372293465|gb|AEX92666.1| ultraspiracle, partial [Daphnia magna]
gi|372293467|gb|AEX92667.1| ultraspiracle, partial [Daphnia magna]
gi|372293469|gb|AEX92668.1| ultraspiracle, partial [Daphnia magna]
gi|372293471|gb|AEX92669.1| ultraspiracle, partial [Daphnia magna]
gi|372293473|gb|AEX92670.1| ultraspiracle, partial [Daphnia magna]
gi|372293475|gb|AEX92671.1| ultraspiracle, partial [Daphnia magna]
gi|372293477|gb|AEX92672.1| ultraspiracle, partial [Daphnia magna]
gi|372293479|gb|AEX92673.1| ultraspiracle, partial [Daphnia magna]
gi|372293481|gb|AEX92674.1| ultraspiracle, partial [Daphnia magna]
gi|372293483|gb|AEX92675.1| ultraspiracle, partial [Daphnia magna]
gi|372293485|gb|AEX92676.1| ultraspiracle, partial [Daphnia magna]
gi|372293487|gb|AEX92677.1| ultraspiracle, partial [Daphnia magna]
gi|372293489|gb|AEX92678.1| ultraspiracle, partial [Daphnia magna]
gi|372293491|gb|AEX92679.1| ultraspiracle, partial [Daphnia magna]
gi|372293493|gb|AEX92680.1| ultraspiracle, partial [Daphnia magna]
gi|372293495|gb|AEX92681.1| ultraspiracle, partial [Daphnia magna]
gi|372293497|gb|AEX92682.1| ultraspiracle, partial [Daphnia magna]
gi|372293499|gb|AEX92683.1| ultraspiracle, partial [Daphnia magna]
gi|372293501|gb|AEX92684.1| ultraspiracle, partial [Daphnia magna]
gi|372293503|gb|AEX92685.1| ultraspiracle, partial [Daphnia magna]
gi|372293505|gb|AEX92686.1| ultraspiracle, partial [Daphnia magna]
gi|372293507|gb|AEX92687.1| ultraspiracle, partial [Daphnia magna]
gi|372293509|gb|AEX92688.1| ultraspiracle, partial [Daphnia magna]
gi|372293511|gb|AEX92689.1| ultraspiracle, partial [Daphnia magna]
gi|372293513|gb|AEX92690.1| ultraspiracle, partial [Daphnia magna]
gi|372293515|gb|AEX92691.1| ultraspiracle, partial [Daphnia magna]
gi|372293517|gb|AEX92692.1| ultraspiracle, partial [Daphnia magna]
gi|372293519|gb|AEX92693.1| ultraspiracle, partial [Daphnia magna]
Length = 162
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R C IDK QR RC +CR+Q
Sbjct: 1 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRQCLIDKRQRNRCQYCRYQ 60
Query: 189 KCLEVGMKLEVSSQS 203
KCL++GMK E +
Sbjct: 61 KCLQMGMKREAVQEE 75
>gi|301608498|ref|XP_002933799.1| PREDICTED: retinoic acid receptor RXR-gamma [Xenopus (Silurana)
tropicalis]
Length = 468
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRT++ VYTC + C IDK QR RC +CR+Q
Sbjct: 143 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLVYTCRDTKDCLIDKRQRNRCQYCRYQ 202
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 203 KCLAMGMKREA 213
>gi|50539872|ref|NP_001002406.1| nuclear receptor subfamily 4, group A, member 2b [Danio rerio]
gi|49903884|gb|AAH76176.1| Nuclear receptor subfamily 4, group A, member 2b [Danio rerio]
Length = 586
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 82 NSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYH 141
+S+ +P + LS + HP S +A +P+ + E LC VCGD + H
Sbjct: 212 DSFALPAPPRKQHGVGLSHSLNVGHPLLESPVA-SPQARGSPSS-EGLCAVCGDNAACQH 269
Query: 142 YGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
YG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 270 YGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLVVGMVKEV 327
>gi|2133651|pir||S58238 DHR38 protein - fruit fly (Drosophila melanogaster)
gi|929562|emb|CAA61534.1| DHR38 [Drosophila melanogaster]
Length = 551
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R RC FCRF
Sbjct: 220 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRF 279
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 280 QKCLVVGMVKEV 291
>gi|409178681|gb|AFV25506.1| ultraspiracle, partial [Drosophila malerkotliana]
Length = 463
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK
Sbjct: 72 PNHPLSNS--KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 129
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL GMK E
Sbjct: 130 RQRNRCQYCRYQKCLTCGMKRE 151
>gi|24585962|ref|NP_724456.1| ecdysone receptor, isoform A [Drosophila melanogaster]
gi|24585964|ref|NP_724457.1| ecdysone receptor, isoform D [Drosophila melanogaster]
gi|24585966|ref|NP_724458.1| ecdysone receptor, isoform E [Drosophila melanogaster]
gi|21626805|gb|AAF57278.3| ecdysone receptor, isoform A [Drosophila melanogaster]
gi|21626806|gb|AAG22334.2| ecdysone receptor, isoform D [Drosophila melanogaster]
gi|21626807|gb|AAM68346.1| ecdysone receptor, isoform E [Drosophila melanogaster]
Length = 849
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 73/131 (55%), Gaps = 6/131 (4%)
Query: 74 YNFNN-----MVDNSYLFQSPGGGSTNMDLS-SAGISYHPFHTSTIAATPEHPDTKEGIE 127
YN +N M SY SP G + DLS S+ ++ + + S A + E
Sbjct: 173 YNMSNGYASPMSAGSYDPYSPTGKTGRDDLSPSSSLNGYSANESCDAKKSKKGPAPRVQE 232
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
ELC VCGD+ SGYHY LTCE CKGFF+R+V VY C R+C +D R++C CR
Sbjct: 233 ELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRL 292
Query: 188 QKCLEVGMKLE 198
+KCL VGM+ E
Sbjct: 293 KKCLAVGMRPE 303
>gi|1046295|gb|AAC59720.1| retinoid X receptor alpha [Danio rerio]
gi|1583308|prf||2120366C retinoid X receptor:ISOTYPE=alpha
Length = 441
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRT++ YTC + C IDK QR RC +CR+Q
Sbjct: 116 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCQIDKRQRNRCQYCRYQ 175
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 176 KCLAMGMKREA 186
>gi|403296683|ref|XP_003939227.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 1
[Saimiri boliviensis boliviensis]
gi|403296685|ref|XP_003939228.1| PREDICTED: nuclear receptor subfamily 4 group A member 1 isoform 2
[Saimiri boliviensis boliviensis]
Length = 598
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|8394483|ref|NP_059019.1| nuclear receptor subfamily 2 group C member 2 [Rattus norvegicus]
gi|1730013|sp|P55094.1|NR2C2_RAT RecName: Full=Nuclear receptor subfamily 2 group C member 2;
AltName: Full=Orphan nuclear receptor TR4; AltName:
Full=Testicular receptor 4
gi|538260|gb|AAA21475.1| TR4 orphan receptor [Rattus norvegicus]
Length = 596
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 96/191 (50%), Gaps = 30/191 (15%)
Query: 28 TPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNNTSASAGGAGYNFNNMVDNSYLFQ 87
+P Q++S + ++PQ D Q+ Q L T+ A G+ ++
Sbjct: 5 SPRIQIISTDSAVRSPQRIQIVTDQQTGQ---KLQIVTAVDASGSS-------KQQFILT 54
Query: 88 SP-GGGSTNMDLSSAGISYHP---FHTS-----------TIAATPEHPDTKEGIE----- 127
SP G G+ + L+S S F TS T +A+ E K ++
Sbjct: 55 SPDGAGTGKVILASPETSSAKQLIFTTSDNLVPGRIQIVTDSASVERLLGKADVQRPQVV 114
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FCR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRL 174
Query: 188 QKCLEVGMKLE 198
+KCLE+GMK+E
Sbjct: 175 KKCLEMGMKME 185
>gi|541563|gb|AAC52143.1| nuclear orphan receptor HZF-3 [Rattus norvegicus]
Length = 598
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|73476627|gb|AAZ76386.1| nuclear receptor subfamily 4 group A member 2 variant NURR1b
[Rattus norvegicus]
Length = 580
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|410968683|ref|XP_003990831.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 1
[Felis catus]
Length = 609
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 271 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 330
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 331 FQKCLAVGMVKEV 343
>gi|118343980|ref|NP_001071809.1| nuclear receptor [Ciona intestinalis]
gi|70571095|dbj|BAE06678.1| nuclear receptor [Ciona intestinalis]
Length = 507
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C VCGD+ SG HYG+ +CE CKGFFKRTV+ YTC ++ C IDK QR RC +CR+Q
Sbjct: 168 ICAVCGDRASGKHYGVYSCEGCKGFFKRTVRKYLTYTCRDDKDCIIDKRQRNRCQYCRYQ 227
Query: 189 KCLEVGMKLEV 199
KC+ +GMK E
Sbjct: 228 KCITMGMKKEA 238
>gi|312074948|ref|XP_003140198.1| hypothetical protein LOAG_04613 [Loa loa]
Length = 594
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EELC VCGDK SGYHY LTCE CKGFF+R+V K +Y C SC ID R++C CR
Sbjct: 194 EELCLVCGDKASGYHYNALTCEGCKGFFRRSVTRKAIYHCKYGESCDIDMYMRRKCQHCR 253
Query: 187 FQKCLEVGMKLE-VSSQSTHGVVVI 210
+KC+E+GM+ E + + S +VVI
Sbjct: 254 LKKCMEIGMRPERLRADSRVPLVVI 278
>gi|112984304|ref|NP_001037470.1| protein ultraspiracle homolog [Bombyx mori]
gi|1345734|sp|P49700.1|USP_BOMMO RecName: Full=Protein ultraspiracle homolog; AltName: Full=BmCF1;
AltName: Full=Nuclear receptor subfamily 2 group B
member 4; AltName: Full=RXR type hormone receptor CF1
gi|456395|gb|AAC13750.1| RXR type hormone receptor [Bombyx mori]
Length = 462
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 53/74 (71%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK QR RC +
Sbjct: 109 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDKNCIIDKRQRNRCQY 168
Query: 185 CRFQKCLEVGMKLE 198
CR+QKCL GMK E
Sbjct: 169 CRYQKCLACGMKRE 182
>gi|41282088|ref|NP_571292.2| retinoic acid receptor RXR-gamma-A [Danio rerio]
gi|52788288|sp|Q90416.2|RXRGA_DANRE RecName: Full=Retinoic acid receptor RXR-gamma-A; AltName:
Full=Nuclear receptor subfamily 2 group B member 3-A;
AltName: Full=Retinoic acid receptor RXR-alpha; AltName:
Full=Retinoid X receptor alpha; AltName: Full=Retinoid X
receptor gamma-A
gi|37590367|gb|AAH59576.1| Retinoid x receptor, gamma a [Danio rerio]
Length = 441
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRT++ YTC + C IDK QR RC +CR+Q
Sbjct: 116 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCQIDKRQRNRCQYCRYQ 175
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 176 KCLAMGMKREA 186
>gi|390464491|ref|XP_003733229.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 3
[Callithrix jacchus]
Length = 609
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 271 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 330
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 331 FQKCLAVGMVKEV 343
>gi|390464489|ref|XP_003733228.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 2
[Callithrix jacchus]
Length = 598
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|74006096|ref|XP_536146.2| PREDICTED: retinoic acid receptor RXR-gamma isoform 1 [Canis lupus
familiaris]
Length = 463
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 54/74 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK QR RC +C
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLMYTCRDNKDCLIDKRQRNRCQYC 194
Query: 186 RFQKCLEVGMKLEV 199
R+QKCL +GMK E
Sbjct: 195 RYQKCLVMGMKREA 208
>gi|170592021|ref|XP_001900768.1| ecdysteroid receptor [Brugia malayi]
gi|158591920|gb|EDP30523.1| ecdysteroid receptor, putative [Brugia malayi]
Length = 568
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EELC VCGDK SGYHY LTCE CKGFF+R+V K +Y C SC ID R++C CR
Sbjct: 191 EELCLVCGDKASGYHYNALTCEGCKGFFRRSVTRKAIYHCKYGESCDIDMYMRRKCQHCR 250
Query: 187 FQKCLEVGMKLE-VSSQSTHGVVVI 210
+KC+E+GM+ E + + S +VVI
Sbjct: 251 LKKCMEIGMRPERLRADSRVPLVVI 275
>gi|149730627|ref|XP_001490544.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 1
[Equus caballus]
Length = 598
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|338715667|ref|XP_003363307.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 [Equus
caballus]
Length = 609
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 271 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 330
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 331 FQKCLAVGMVKEV 343
>gi|402888373|ref|XP_003907538.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 2
[Papio anubis]
Length = 609
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 271 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 330
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 331 FQKCLAVGMVKEV 343
>gi|397525633|ref|XP_003832764.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 2
[Pan paniscus]
Length = 609
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 271 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 330
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 331 FQKCLAVGMVKEV 343
>gi|332233948|ref|XP_003266170.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 2
[Nomascus leucogenys]
gi|395732378|ref|XP_003776057.1| PREDICTED: nuclear receptor subfamily 4 group A member 2-like
isoform 2 [Pongo abelii]
gi|395846622|ref|XP_003796002.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 1
[Otolemur garnettii]
gi|403258981|ref|XP_003922017.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 2
[Saimiri boliviensis boliviensis]
gi|426337434|ref|XP_004032711.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 2
[Gorilla gorilla gorilla]
Length = 609
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 271 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 330
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 331 FQKCLAVGMVKEV 343
>gi|409178671|gb|AFV25501.1| ultraspiracle, partial [Drosophila hydei]
Length = 443
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 52/74 (70%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK QR RC +
Sbjct: 61 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQY 120
Query: 185 CRFQKCLEVGMKLE 198
CR+QKCL GMK E
Sbjct: 121 CRYQKCLTCGMKRE 134
>gi|21310111|gb|AAM46151.1|AF378829_1 nuclear hormone receptor RXR [Branchiostoma floridae]
Length = 522
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 50/70 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R C IDK QR RC +CR+Q
Sbjct: 159 ICQICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDNRDCVIDKRQRNRCQYCRYQ 218
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 219 KCLAMGMKRE 228
>gi|2645018|emb|CAA75690.1| hormone receptor 38 [Drosophila melanogaster]
Length = 552
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A+++C +DK +R RC FCRF
Sbjct: 221 QLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRF 280
Query: 188 QKCLEVGMKLEV 199
QKCL VGM EV
Sbjct: 281 QKCLVVGMVKEV 292
>gi|426221073|ref|XP_004004736.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 2
[Ovis aries]
Length = 609
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 271 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 330
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 331 FQKCLAVGMVKEV 343
>gi|73476621|gb|AAZ76383.1| nuclear receptor subfamily 4 group A member 2 variant NURR1c
[Rattus norvegicus]
Length = 500
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|397525631|ref|XP_003832763.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 1
[Pan paniscus]
gi|340513646|gb|AEK33397.1| nuclear receptor subfamily 4 group A member 2 [Sus scrofa]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|388454033|ref|NP_001253839.1| nuclear receptor subfamily 4 group A member 2 [Macaca mulatta]
gi|402888371|ref|XP_003907537.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 1
[Papio anubis]
gi|355564906|gb|EHH21395.1| hypothetical protein EGK_04449 [Macaca mulatta]
gi|383411025|gb|AFH28726.1| nuclear receptor subfamily 4 group A member 2 [Macaca mulatta]
gi|383411027|gb|AFH28727.1| nuclear receptor subfamily 4 group A member 2 [Macaca mulatta]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|354488967|ref|XP_003506636.1| PREDICTED: nuclear receptor subfamily 4 group A member 2-like
[Cricetulus griseus]
gi|344249601|gb|EGW05705.1| Nuclear receptor subfamily 4 group A member 2 [Cricetulus griseus]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|118344438|ref|NP_001072044.1| nuclear receptor [Ciona intestinalis]
gi|70571388|dbj|BAE06736.1| nuclear receptor [Ciona intestinalis]
Length = 692
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD+ SG HYG +CE CKGFFKR+V+ K YTC R C ++KT R RC +CRF
Sbjct: 204 DLCVVCGDRASGRHYGAKSCEGCKGFFKRSVRKKLTYTCRGSRDCSVNKTHRNRCQYCRF 263
Query: 188 QKCLEVGMK 196
QKC+ +GMK
Sbjct: 264 QKCVLMGMK 272
>gi|118403728|ref|NP_001072303.1| nuclear receptor subfamily 4, group A, member 1 [Xenopus (Silurana)
tropicalis]
gi|111305603|gb|AAI21357.1| nuclear receptor subfamily 4, group A, member 1 [Xenopus (Silurana)
tropicalis]
Length = 577
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
P + EG C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R
Sbjct: 239 PSSNEG---RCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRR 295
Query: 180 KRCPFCRFQKCLEVGMKLEV 199
RC FCRFQKCL VGM EV
Sbjct: 296 NRCQFCRFQKCLAVGMVKEV 315
>gi|146400033|gb|ABQ28714.1| ecdysone receptor isoform C [Brugia malayi]
Length = 405
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EELC VCGDK SGYHY LTCE CKGFF+R+V K +Y C SC ID R++C CR
Sbjct: 191 EELCLVCGDKASGYHYNALTCEGCKGFFRRSVTRKAIYHCKYGESCDIDMYMRRKCQHCR 250
Query: 187 FQKCLEVGMKLE-VSSQSTHGVVVI 210
+KC+E+GM+ E + + S +VVI
Sbjct: 251 LKKCMEIGMRPERLRADSRVPLVVI 275
>gi|118093899|ref|XP_422166.2| PREDICTED: nuclear receptor subfamily 4 group A member 2 [Gallus
gallus]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|75061669|sp|Q5R5Y4.1|NR4A2_PONAB RecName: Full=Nuclear receptor subfamily 4 group A member 2
gi|55732257|emb|CAH92832.1| hypothetical protein [Pongo abelii]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|298231151|ref|NP_001177205.1| nuclear receptor subfamily 4 group A member 2 [Sus scrofa]
gi|198401845|gb|ACH87583.1| nuclear receptor subfamily 4 group A member 2 [Sus scrofa]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|6166579|sp|Q07917.3|NR4A2_RAT RecName: Full=Nuclear receptor subfamily 4 group A member 2;
AltName: Full=NUR-related factor 1; AltName:
Full=Nuclear orphan receptor HZF-3; AltName: Full=Orphan
nuclear receptor NURR1; AltName: Full=Regenerating liver
nuclear receptor 1; Short=RNR-1; AltName: Full=SL-322
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|31543340|ref|NP_062201.2| nuclear receptor subfamily 4 group A member 2 [Rattus norvegicus]
gi|2317857|gb|AAC53315.1| orphan nuclear hormone receptor [Rattus norvegicus]
gi|149047798|gb|EDM00414.1| nuclear receptor subfamily 4, group A, member 2 [Rattus norvegicus]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|355750548|gb|EHH54875.1| hypothetical protein EGM_03974 [Macaca fascicularis]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|313230320|emb|CBY08024.1| unnamed protein product [Oikopleura dioica]
Length = 420
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 52/70 (74%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C VCGD+ SG HYGL +CE CKGFFKRTV+ + Y+C + C IDK QR RC FCR+Q
Sbjct: 101 VCKVCGDRASGKHYGLYSCEGCKGFFKRTVRKELSYSCRDNKHCVIDKRQRNRCQFCRYQ 160
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 161 KCLTMGMKRE 170
>gi|118344170|ref|NP_001071910.1| nuclear receptor [Ciona intestinalis]
gi|92081500|dbj|BAE93297.1| nuclear receptor [Ciona intestinalis]
Length = 692
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD+ SG HYG +CE CKGFFKR+V+ K YTC R C ++KT R RC +CRF
Sbjct: 204 DLCVVCGDRASGRHYGAKSCEGCKGFFKRSVRKKLTYTCRGSRDCSVNKTHRNRCQYCRF 263
Query: 188 QKCLEVGMK 196
QKC+ +GMK
Sbjct: 264 QKCVLMGMK 272
>gi|74004315|ref|XP_535920.2| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 1
[Canis lupus familiaris]
gi|301781788|ref|XP_002926310.1| PREDICTED: nuclear receptor subfamily 4 group A member 2-like
[Ailuropoda melanoleuca]
gi|281344784|gb|EFB20368.1| hypothetical protein PANDA_015943 [Ailuropoda melanoleuca]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|62898982|dbj|BAD97345.1| nuclear receptor subfamily 4, group A, member 2 isoform a variant
[Homo sapiens]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|5453822|ref|NP_006177.1| nuclear receptor subfamily 4 group A member 2 [Homo sapiens]
gi|291391579|ref|XP_002712233.1| PREDICTED: nuclear receptor subfamily 4, group A, member 2
[Oryctolagus cuniculus]
gi|297668642|ref|XP_002812539.1| PREDICTED: nuclear receptor subfamily 4 group A member 2-like
isoform 1 [Pongo abelii]
gi|332233946|ref|XP_003266169.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 1
[Nomascus leucogenys]
gi|332814690|ref|XP_003309349.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 [Pan
troglodytes]
gi|332814692|ref|XP_001142366.2| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 3
[Pan troglodytes]
gi|344268071|ref|XP_003405887.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 [Loxodonta
africana]
gi|348585955|ref|XP_003478736.1| PREDICTED: nuclear receptor subfamily 4 group A member 2-like
[Cavia porcellus]
gi|395846624|ref|XP_003796003.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 2
[Otolemur garnettii]
gi|403258979|ref|XP_003922016.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 1
[Saimiri boliviensis boliviensis]
gi|426221071|ref|XP_004004735.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 1
[Ovis aries]
gi|426337432|ref|XP_004032710.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 1
[Gorilla gorilla gorilla]
gi|1171750|sp|P43354.1|NR4A2_HUMAN RecName: Full=Nuclear receptor subfamily 4 group A member 2;
AltName: Full=Immediate-early response protein NOT;
AltName: Full=Orphan nuclear receptor NURR1; AltName:
Full=Transcriptionally-inducible nuclear receptor
gi|415823|emb|CAA53518.1| NOT [Homo sapiens]
gi|4519607|dbj|BAA75666.1| Nurr1 [Homo sapiens]
gi|4760535|dbj|BAA77328.1| T-cell nuclear receptor NOT (Nurr1) [Homo sapiens]
gi|14424530|gb|AAH09288.1| Nuclear receptor subfamily 4, group A, member 2 [Homo sapiens]
gi|62988816|gb|AAY24203.1| unknown [Homo sapiens]
gi|119631859|gb|EAX11454.1| nuclear receptor subfamily 4, group A, member 2, isoform CRA_a
[Homo sapiens]
gi|119631860|gb|EAX11455.1| nuclear receptor subfamily 4, group A, member 2, isoform CRA_a
[Homo sapiens]
gi|190690595|gb|ACE87072.1| nuclear receptor subfamily 4, group A, member 2 protein [synthetic
construct]
gi|190691957|gb|ACE87753.1| nuclear receptor subfamily 4, group A, member 2 protein [synthetic
construct]
gi|307685739|dbj|BAJ20800.1| nuclear receptor subfamily 4, group A, member 2 [synthetic
construct]
gi|325495459|gb|ADZ17335.1| nuclear receptor related 1 [Homo sapiens]
gi|351708679|gb|EHB11598.1| Nuclear receptor subfamily 4 group A member 2 [Heterocephalus
glaber]
gi|410251398|gb|JAA13666.1| nuclear receptor subfamily 4, group A, member 2 [Pan troglodytes]
gi|410251400|gb|JAA13667.1| nuclear receptor subfamily 4, group A, member 2 [Pan troglodytes]
gi|410251402|gb|JAA13668.1| nuclear receptor subfamily 4, group A, member 2 [Pan troglodytes]
gi|410352435|gb|JAA42821.1| nuclear receptor subfamily 4, group A, member 2 [Pan troglodytes]
gi|410352439|gb|JAA42823.1| nuclear receptor subfamily 4, group A, member 2 [Pan troglodytes]
gi|410352441|gb|JAA42824.1| nuclear receptor subfamily 4, group A, member 2 [Pan troglodytes]
gi|440896775|gb|ELR48611.1| Nuclear receptor subfamily 4 group A member 2 [Bos grunniens mutus]
gi|444721587|gb|ELW62317.1| Nuclear receptor subfamily 4 group A member 2 [Tupaia chinensis]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|310216|gb|AAA42058.1| nuclear receptor [Rattus norvegicus]
Length = 597
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|431894829|gb|ELK04622.1| Nuclear receptor subfamily 4 group A member 2 [Pteropus alecto]
Length = 609
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 271 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 330
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 331 FQKCLAVGMVKEV 343
>gi|198401843|gb|ACH87582.1| nuclear receptor subfamily 4 group A member 2 [Sus scrofa]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|7305325|ref|NP_038641.1| nuclear receptor subfamily 4 group A member 2 [Mus musculus]
gi|213417709|ref|NP_001132981.1| nuclear receptor subfamily 4 group A member 2 [Mus musculus]
gi|548390|sp|Q06219.1|NR4A2_MOUSE RecName: Full=Nuclear receptor subfamily 4 group A member 2;
AltName: Full=NUR-related factor 1; AltName: Full=Orphan
nuclear receptor NURR1
gi|264411|gb|AAB25138.1| Nur-related factor 1 [Mus sp.]
gi|2052390|gb|AAC53153.1| steroid/thyroid hormone orphan nuclear receptor [Mus musculus]
gi|74177352|dbj|BAE34579.1| unnamed protein product [Mus musculus]
gi|148694978|gb|EDL26925.1| nuclear receptor subfamily 4, group A, member 2, isoform CRA_a [Mus
musculus]
gi|148694980|gb|EDL26927.1| nuclear receptor subfamily 4, group A, member 2, isoform CRA_a [Mus
musculus]
gi|187953675|gb|AAI37716.1| Nuclear receptor subfamily 4, group A, member 2 [Mus musculus]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|73476631|gb|AAZ76388.1| nuclear receptor subfamily 4 group A member 2 variant NURR2 [Rattus
norvegicus]
Length = 392
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 197 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 256
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 257 FQKCLAVGMVKEV 269
>gi|149241919|pdb|2HAN|A Chain A, Structural Basis Of Heterodimeric Ecdysteroid Receptor
Interaction With Natural Response Element Hsp27 Gene
Promoter
Length = 93
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 55/83 (66%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK QR RC +
Sbjct: 8 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQY 67
Query: 185 CRFQKCLEVGMKLEVSSQSTHGV 207
CR+QKCL GMK E + G+
Sbjct: 68 CRYQKCLTCGMKREAVQEERQGI 90
>gi|334330009|ref|XP_001365914.2| PREDICTED: nuclear receptor subfamily 4 group A member 2-like
isoform 2 [Monodelphis domestica]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|115496051|ref|NP_001069676.1| nuclear receptor subfamily 4 group A member 2 [Bos taurus]
gi|122132470|sp|Q08E53.1|NR4A2_BOVIN RecName: Full=Nuclear receptor subfamily 4 group A member 2
gi|115304723|gb|AAI23416.1| Nuclear receptor subfamily 4, group A, member 2 [Bos taurus]
gi|296490582|tpg|DAA32695.1| TPA: nuclear receptor subfamily 4 group A member 2 [Bos taurus]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|409178663|gb|AFV25497.1| ultraspiracle, partial [Drosophila funebris]
Length = 433
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 52/74 (70%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK QR RC +
Sbjct: 50 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQY 109
Query: 185 CRFQKCLEVGMKLE 198
CR+QKCL GMK E
Sbjct: 110 CRYQKCLSCGMKRE 123
>gi|440900685|gb|ELR51764.1| Retinoic acid receptor gamma, partial [Bos grunniens mutus]
Length = 577
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 21 RKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPM------------LGNNTSAS 68
R +P P Q + A + P+ Q + D+ S + M LG +
Sbjct: 81 RAGTEPPRPGQWAWAGAVAEEVPRPQQTPGDSASHTAAAMATNKERLFVPGALGPGSGYP 140
Query: 69 AGGAGYNFNNMVDNSYLFQ--SP---GGGSTNMDLSSAGISYHPFHTST--IAATPEHPD 121
G + F + S F+ SP G G ++ A +S TS+ + + P
Sbjct: 141 GAGFPFAFPGALRGSPPFEMLSPSFRGLGQPDLPKEMASLSVETQSTSSEEMVPSSPSPP 200
Query: 122 TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
+ + C VC DK SGYHYG+ +CE CKGFF+R++Q VYTC +++C I+K R R
Sbjct: 201 PPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNR 260
Query: 182 CPFCRFQKCLEVGMKLEV 199
C +CR QKC EVGM E
Sbjct: 261 CQYCRLQKCFEVGMSKEA 278
>gi|395519580|ref|XP_003763922.1| PREDICTED: nuclear receptor subfamily 4 group A member 2
[Sarcophilus harrisii]
Length = 598
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|348541131|ref|XP_003458040.1| PREDICTED: retinoic acid receptor RXR-beta-A isoform 2 [Oreochromis
niloticus]
Length = 462
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 123 KRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCTVDKRQRNRCQYCR 182
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 183 YQKCLAMGMKRE 194
>gi|288187184|gb|ADC42113.1| ecdysone receptor isoform C [Dirofilaria immitis]
gi|288187188|gb|ADC42116.1| ecdysone receptor isoform C [Dirofilaria immitis]
Length = 413
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EELC VCGDK SGYHY LTCE CKGFF+R+V K +Y C SC ID R++C CR
Sbjct: 249 EELCLVCGDKASGYHYNALTCEGCKGFFRRSVTRKAIYHCKYGESCDIDMYMRRKCQHCR 308
Query: 187 FQKCLEVGMKLE-VSSQSTHGVVVI 210
+KC+E+GM+ E + + S +VVI
Sbjct: 309 LKKCMEIGMRPERLRADSRVPLVVI 333
>gi|147903779|ref|NP_001080159.1| nuclear receptor subfamily 4, group A, member 1 [Xenopus laevis]
gi|33416666|gb|AAH56025.1| Nr4a1 protein [Xenopus laevis]
Length = 577
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
P + EG C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R
Sbjct: 239 PSSNEG---RCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRR 295
Query: 180 KRCPFCRFQKCLEVGMKLEV 199
RC FCRFQKCL VGM EV
Sbjct: 296 NRCQFCRFQKCLAVGMVKEV 315
>gi|4514523|dbj|BAA75461.1| Nurr2 [Mus musculus]
gi|148694979|gb|EDL26926.1| nuclear receptor subfamily 4, group A, member 2, isoform CRA_b [Mus
musculus]
Length = 392
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 197 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 256
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 257 FQKCLAVGMVKEV 269
>gi|325495555|gb|ADZ17383.1| nuclear receptor related 1 [Homo sapiens]
Length = 573
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>gi|124054090|gb|ABM89229.1| retinoid X receptor alpha a [Danio rerio]
Length = 340
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 130 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQ 189
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 190 KCLAMGMKREA 200
>gi|327279825|ref|XP_003224656.1| PREDICTED: nuclear receptor subfamily 4 group A member 2-like
[Anolis carolinensis]
Length = 638
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 300 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 359
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 360 FQKCLAVGMVKEV 372
>gi|410921388|ref|XP_003974165.1| PREDICTED: retinoic acid receptor RXR-gamma-B-like [Takifugu
rubripes]
Length = 462
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 137 ICSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKECLIDKRQRNRCQYCRYQ 196
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 197 KCLAMGMKREA 207
>gi|47207654|emb|CAF91378.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 119 ICSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKECLIDKRQRNRCQYCRYQ 178
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 179 KCLAMGMKREA 189
>gi|348527034|ref|XP_003451024.1| PREDICTED: nuclear receptor subfamily 4 group A member 3-like
[Oreochromis niloticus]
Length = 589
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 90 GGGSTNMDLSSAGISY-HPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
G GS+++ S + P ++ + P EG C VCGD + HYG+ TCE
Sbjct: 215 GAGSSSLAFRSLALGPCGPLLADSLPSPPPRGPQGEGT---CAVCGDNAACQHYGVRTCE 271
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 272 GCKGFFKRTVQKNAKYVCLASKNCPVDKRRRNRCQYCRFQKCLSVGMVKEV 322
>gi|390464493|ref|XP_002749476.2| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 1
[Callithrix jacchus]
Length = 535
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 197 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 256
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 257 FQKCLAVGMVKEV 269
>gi|913967|gb|AAB33999.1| NGFI-B/nur77 beta-type transcription factor homolog [Homo sapiens]
Length = 535
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 197 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 256
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 257 FQKCLAVGMVKEV 269
>gi|363738759|ref|XP_414462.3| PREDICTED: nuclear receptor subfamily 2 group C member 2 [Gallus
gallus]
Length = 629
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 146 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 205
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 206 RLKKCLEMGMKME 218
>gi|432883656|ref|XP_004074314.1| PREDICTED: retinoic acid receptor RXR-beta-A [Oryzias latipes]
Length = 465
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 124 KRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCTVDKRQRNRCQYCR 183
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 184 YQKCLAMGMKRE 195
>gi|397525635|ref|XP_003832765.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 3
[Pan paniscus]
Length = 535
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 197 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 256
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 257 FQKCLAVGMVKEV 269
>gi|348541129|ref|XP_003458039.1| PREDICTED: retinoic acid receptor RXR-beta-A isoform 1 [Oreochromis
niloticus]
Length = 417
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 90 KRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCTVDKRQRNRCQYCR 149
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 150 YQKCLAMGMKRE 161
>gi|402888375|ref|XP_003907539.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 3
[Papio anubis]
Length = 535
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 197 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 256
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 257 FQKCLAVGMVKEV 269
>gi|154147678|ref|NP_001093678.1| nuclear receptor subfamily 4 group A member 2 [Xenopus (Silurana)
tropicalis]
gi|172044159|sp|A4IIG7.1|NR4A2_XENTR RecName: Full=Nuclear receptor subfamily 4 group A member 2
gi|134024482|gb|AAI36010.1| nr4a2 protein [Xenopus (Silurana) tropicalis]
Length = 591
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 253 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 312
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 313 FQKCLVVGMVKEV 325
>gi|2352809|gb|AAB69281.1| developmental orphan receptor-1 precursor [Ambystoma mexicanum]
Length = 416
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
ELC VCGDK SG HYG +TCE CKGFFKR+++ VYTC + C I+K R RC +CR
Sbjct: 149 ELCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKECIINKHHRNRCQYCRL 208
Query: 188 QKCLEVGMK 196
Q+C+ +GMK
Sbjct: 209 QRCIALGMK 217
>gi|410968685|ref|XP_003990832.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 2
[Felis catus]
Length = 535
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 197 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 256
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 257 FQKCLAVGMVKEV 269
>gi|149728243|ref|XP_001491080.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Equus caballus]
Length = 596
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 96/191 (50%), Gaps = 30/191 (15%)
Query: 28 TPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNNTSASAGGAGYNFNNMVDNSYLFQ 87
+P Q++S + +PQ D Q+ Q ++ T+ A G+ +L
Sbjct: 5 SPRIQIISTDSAVASPQRIQIVTDQQTGQKIQIV---TAVDASGSP-------KQQFLLT 54
Query: 88 SP-GGGSTNMDLSSAGISYHP---FHTS-----------TIAATPEHPDTKEGIE----- 127
SP G G+ + L+S S F TS T +A+ E K ++
Sbjct: 55 SPDGAGTGKVILASPETSSAKQLIFTTSDNLVPGRIQIVTDSASVERLLGKADVQRPQVV 114
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FCR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRL 174
Query: 188 QKCLEVGMKLE 198
+KCLE+GMK+E
Sbjct: 175 KKCLEMGMKME 185
>gi|73476629|gb|AAZ76387.1| nuclear receptor subfamily 4 group A member 2 variant TINUR [Rattus
norvegicus]
Length = 535
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 197 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 256
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 257 FQKCLAVGMVKEV 269
>gi|345328130|ref|XP_001508960.2| PREDICTED: nuclear receptor subfamily 4 group A member 2-like
[Ornithorhynchus anatinus]
Length = 532
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 194 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 253
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 254 FQKCLAVGMVKEV 266
>gi|158931496|gb|ABW83196.1| ultraspiracle [Lucilia sericata]
Length = 174
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 53/75 (70%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK QR RC +
Sbjct: 3 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRNCIIDKRQRNRCQY 62
Query: 185 CRFQKCLEVGMKLEV 199
CR+QKCL GMK E
Sbjct: 63 CRYQKCLACGMKREA 77
>gi|164698468|ref|NP_001106956.1| nuclear receptor subfamily 4 group A member 2 [Danio rerio]
gi|157284431|gb|ABV31068.1| nuclear orphan receptor Nr4a2a [Danio rerio]
Length = 598
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLVVGMVKEV 332
>gi|332233950|ref|XP_003266171.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 3
[Nomascus leucogenys]
gi|395732380|ref|XP_003776058.1| PREDICTED: nuclear receptor subfamily 4 group A member 2-like
isoform 3 [Pongo abelii]
gi|395846626|ref|XP_003796004.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 3
[Otolemur garnettii]
gi|403258983|ref|XP_003922018.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 3
[Saimiri boliviensis boliviensis]
gi|410035795|ref|XP_003949952.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 [Pan
troglodytes]
gi|426221075|ref|XP_004004737.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 3
[Ovis aries]
gi|426337436|ref|XP_004032712.1| PREDICTED: nuclear receptor subfamily 4 group A member 2 isoform 3
[Gorilla gorilla gorilla]
gi|44890728|gb|AAH66890.1| Nuclear receptor subfamily 4, group A, member 2 [Homo sapiens]
gi|158256348|dbj|BAF84145.1| unnamed protein product [Homo sapiens]
Length = 535
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 197 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 256
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 257 FQKCLAVGMVKEV 269
>gi|327265992|ref|XP_003217791.1| PREDICTED: nuclear receptor subfamily 2 group C member 2-like
[Anolis carolinensis]
Length = 629
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 146 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 205
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 206 RLKKCLEMGMKME 218
>gi|149036768|gb|EDL91386.1| rCG56527, isoform CRA_a [Rattus norvegicus]
Length = 629
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 146 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFC 205
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 206 RLKKCLEMGMKME 218
>gi|73909187|gb|AAI03687.1| Nr2c2 protein [Mus musculus]
Length = 501
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 96/191 (50%), Gaps = 30/191 (15%)
Query: 28 TPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNNTSASAGGAGYNFNNMVDNSYLFQ 87
+P Q++S + +PQ D Q+ Q ++ T+ A G+ ++
Sbjct: 5 SPRIQIISTDSAVASPQRIQIVTDQQTGQKIQIV---TAVDASGSS-------KQQFILT 54
Query: 88 SP-GGGSTNMDLSSAGISYHP---FHTS-----------TIAATPEHPDTKEGIE----- 127
SP G G+ + L+S S F TS T +A+ E K ++
Sbjct: 55 SPDGAGTGKVILASPETSSAKQLIFTTSDNLVPGRIQIVTDSASVERLLGKADVQRPQVV 114
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FCR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRL 174
Query: 188 QKCLEVGMKLE 198
+KCLE+GMK+E
Sbjct: 175 KKCLEMGMKME 185
>gi|301617695|ref|XP_002938282.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 [Xenopus
(Silurana) tropicalis]
Length = 509
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
I E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 112 IIEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKSLTYSCRSSQDCVINKHHRNRCQFC 171
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 172 RLKKCLEMGMKME 184
>gi|67906168|ref|NP_035760.1| nuclear receptor subfamily 2 group C member 2 [Mus musculus]
gi|1351191|sp|P49117.1|NR2C2_MOUSE RecName: Full=Nuclear receptor subfamily 2 group C member 2;
AltName: Full=Orphan nuclear receptor TAK1; AltName:
Full=Orphan nuclear receptor TR4; AltName:
Full=Testicular receptor 4
gi|885593|gb|AAA93150.1| orphan receptor TAK1 [Mus musculus]
gi|73909027|gb|AAI03684.1| Nr2c2 protein [Mus musculus]
gi|73909185|gb|AAI03685.1| Nr2c2 protein [Mus musculus]
gi|74210203|dbj|BAE23331.1| unnamed protein product [Mus musculus]
Length = 596
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 96/191 (50%), Gaps = 30/191 (15%)
Query: 28 TPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNNTSASAGGAGYNFNNMVDNSYLFQ 87
+P Q++S + +PQ D Q+ Q ++ T+ A G+ ++
Sbjct: 5 SPRIQIISTDSAVASPQRIQIVTDQQTGQKIQIV---TAVDASGSS-------KQQFILT 54
Query: 88 SP-GGGSTNMDLSSAGISYHP---FHTS-----------TIAATPEHPDTKEGIE----- 127
SP G G+ + L+S S F TS T +A+ E K ++
Sbjct: 55 SPDGAGTGKVILASPETSSAKQLIFTTSDNLVPGRIQIVTDSASVERLLGKADVQRPQVV 114
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FCR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRL 174
Query: 188 QKCLEVGMKLE 198
+KCLE+GMK+E
Sbjct: 175 KKCLEMGMKME 185
>gi|354465507|ref|XP_003495221.1| PREDICTED: nuclear receptor subfamily 2 group C member 2
[Cricetulus griseus]
gi|344241619|gb|EGV97722.1| Nuclear receptor subfamily 2 group C member 2 [Cricetulus griseus]
Length = 596
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 96/191 (50%), Gaps = 30/191 (15%)
Query: 28 TPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNNTSASAGGAGYNFNNMVDNSYLFQ 87
+P Q++S + +PQ D Q+ Q ++ T+ A G+ ++
Sbjct: 5 SPRIQIISTDSAVASPQRIQIVTDQQTGQKIQIV---TAVDASGSS-------KQQFILT 54
Query: 88 SP-GGGSTNMDLSSAGISYHP---FHTS-----------TIAATPEHPDTKEGIE----- 127
SP G G+ + L+S S F TS T +A+ E K ++
Sbjct: 55 SPDGAGTGKVILASPETSSAKQLIFTTSDNLVPGRIQIVTDSASVERLLGKADVQRPQVV 114
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FCR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRL 174
Query: 188 QKCLEVGMKLE 198
+KCLE+GMK+E
Sbjct: 175 KKCLEMGMKME 185
>gi|18157523|dbj|BAB83838.1| RXRB [Oryzias latipes]
Length = 427
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 90 KRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCTVDKRQRNRCQYCR 149
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 150 YQKCLAMGMKRE 161
>gi|297263119|ref|XP_002798750.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Macaca mulatta]
Length = 648
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 165 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 224
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 225 RLKKCLEMGMKME 237
>gi|397511829|ref|XP_003826267.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Pan paniscus]
Length = 648
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 165 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 224
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 225 RLKKCLEMGMKME 237
>gi|393911049|gb|EJD76140.1| ecdysone receptor isoform A [Loa loa]
Length = 489
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EELC VCGDK SGYHY LTCE CKGFF+R+V K +Y C SC ID R++C CR
Sbjct: 194 EELCLVCGDKASGYHYNALTCEGCKGFFRRSVTRKAIYHCKYGESCDIDMYMRRKCQHCR 253
Query: 187 FQKCLEVGMKLE-VSSQSTHGVVVI 210
+KC+E+GM+ E + + S +VVI
Sbjct: 254 LKKCMEIGMRPERLRADSRVPLVVI 278
>gi|10198094|gb|AAG15181.1| nuclear receptor NHR-91 [Caenorhabditis elegans]
gi|10198096|gb|AAG15182.1| nuclear receptor NHR-91 [Caenorhabditis elegans]
Length = 475
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 112 TIAATPEHPDTKEGIEE----LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCV 167
+I TP T + + LC VCGDK +G HYG TCE CKGFFKR+VQNKKVY C
Sbjct: 79 SILGTPTTDSTSNAVSKSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCS 138
Query: 168 AERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
+ C IDK R RC CRF+KC+ GM E
Sbjct: 139 QDNCCEIDKQNRNRCQSCRFRKCISKGMLTE 169
>gi|149036770|gb|EDL91388.1| rCG56527, isoform CRA_c [Rattus norvegicus]
Length = 596
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 96/191 (50%), Gaps = 30/191 (15%)
Query: 28 TPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNNTSASAGGAGYNFNNMVDNSYLFQ 87
+P Q++S + +PQ D Q+ Q ++ T+ A G+ ++
Sbjct: 5 SPRIQIISTDSAVASPQRIQIVTDQQTGQKIQIV---TAVDASGSS-------KQQFILT 54
Query: 88 SP-GGGSTNMDLSSAGISYHP---FHTS-----------TIAATPEHPDTKEGIE----- 127
SP G G+ + L+S S F TS T +A+ E K ++
Sbjct: 55 SPDGAGTGKVILASPETSSAKQLIFTTSDNLVPGRIQIVTDSASVERLLGKADVQRPQVV 114
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FCR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRL 174
Query: 188 QKCLEVGMKLE 198
+KCLE+GMK+E
Sbjct: 175 KKCLEMGMKME 185
>gi|395516672|ref|XP_003762511.1| PREDICTED: nuclear receptor subfamily 2 group C member 2
[Sarcophilus harrisii]
Length = 629
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 146 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 205
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 206 RLKKCLEMGMKME 218
>gi|327264363|ref|XP_003216983.1| PREDICTED: nuclear receptor subfamily 4 group A member 1-like
[Anolis carolinensis]
Length = 584
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 50/73 (68%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC FCR
Sbjct: 250 EGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCR 309
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 310 FQKCLAVGMVKEV 322
>gi|195130249|ref|XP_002009565.1| GI15428 [Drosophila mojavensis]
gi|193908015|gb|EDW06882.1| GI15428 [Drosophila mojavensis]
Length = 484
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 52/74 (70%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C IDK QR RC +
Sbjct: 82 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQY 141
Query: 185 CRFQKCLEVGMKLE 198
CR+QKCL GMK E
Sbjct: 142 CRYQKCLTCGMKRE 155
>gi|402887043|ref|XP_003906915.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Papio anubis]
gi|403268297|ref|XP_003926214.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 648
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 165 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 224
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 225 RLKKCLEMGMKME 237
>gi|441665232|ref|XP_003265071.2| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor subfamily 2 group
C member 2 [Nomascus leucogenys]
Length = 648
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 165 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 224
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 225 RLKKCLEMGMKME 237
>gi|114585547|ref|XP_001158643.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 6
[Pan troglodytes]
gi|410222744|gb|JAA08591.1| nuclear receptor subfamily 2, group C, member 2 [Pan troglodytes]
gi|410261218|gb|JAA18575.1| nuclear receptor subfamily 2, group C, member 2 [Pan troglodytes]
gi|410287872|gb|JAA22536.1| nuclear receptor subfamily 2, group C, member 2 [Pan troglodytes]
gi|410349801|gb|JAA41504.1| nuclear receptor subfamily 2, group C, member 2 [Pan troglodytes]
Length = 615
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 132 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 191
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 192 RLKKCLEMGMKME 204
>gi|912822|gb|AAB33314.1| type II zinc finger DNA binding transcription factor [Mus sp.]
gi|148666900|gb|EDK99316.1| nuclear receptor subfamily 2, group C, member 2, isoform CRA_a [Mus
musculus]
Length = 629
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 146 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFC 205
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 206 RLKKCLEMGMKME 218
>gi|538261|gb|AAA21474.1| TR4 orphan receptor [Homo sapiens]
Length = 615
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 132 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFC 191
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 192 RLKKCLEMGMKME 204
>gi|1581937|prf||2117333A embryonal long terminal repeat-binding protein
Length = 450
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 52/76 (68%), Gaps = 15/76 (19%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDK GFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 84 EDLDELCPVCGDK---------------GFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 128
Query: 184 FCRFQKCLEVGMKLEV 199
FCRFQKCL VGM+LE
Sbjct: 129 FCRFQKCLTVGMRLEA 144
>gi|410897004|ref|XP_003961989.1| PREDICTED: nuclear receptor subfamily 4 group A member 2-like
[Takifugu rubripes]
Length = 459
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E +C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC FCR
Sbjct: 121 EGVCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQFCR 180
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 181 FQKCLVVGMVREV 193
>gi|36950991|ref|NP_003289.2| nuclear receptor subfamily 2 group C member 2 [Homo sapiens]
gi|296225932|ref|XP_002758706.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Callithrix jacchus]
gi|119584617|gb|EAW64213.1| nuclear receptor subfamily 2, group C, member 2, isoform CRA_a
[Homo sapiens]
gi|119584618|gb|EAW64214.1| nuclear receptor subfamily 2, group C, member 2, isoform CRA_a
[Homo sapiens]
gi|168278006|dbj|BAG10981.1| orphan nuclear receptor TR4 [synthetic construct]
gi|325588346|gb|ADZ31973.1| testicular nuclear receptor 4 [Homo sapiens]
gi|355564520|gb|EHH21020.1| hypothetical protein EGK_03993 [Macaca mulatta]
gi|380816092|gb|AFE79920.1| nuclear receptor subfamily 2 group C member 2 [Macaca mulatta]
gi|383421225|gb|AFH33826.1| nuclear receptor subfamily 2 group C member 2 [Macaca mulatta]
Length = 615
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 132 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 191
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 192 RLKKCLEMGMKME 204
>gi|345786121|ref|XP_541755.3| PREDICTED: nuclear receptor subfamily 2 group C member 2 [Canis
lupus familiaris]
Length = 596
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 173 RLKKCLEMGMKME 185
>gi|71998028|ref|NP_001024953.1| Protein NHR-91, isoform a [Caenorhabditis elegans]
gi|75025546|sp|Q9U2R6.2|NHR91_CAEEL RecName: Full=Nuclear hormone receptor family member nhr-91
gi|14530595|emb|CAB60329.2| Protein NHR-91, isoform a [Caenorhabditis elegans]
gi|33943636|gb|AAQ55497.1| NHR-91A [Caenorhabditis elegans]
Length = 474
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 112 TIAATPEHPDTKEGIEE----LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCV 167
+I TP T + + LC VCGDK +G HYG TCE CKGFFKR+VQNKKVY C
Sbjct: 78 SILGTPTTDSTSNAVSKSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCS 137
Query: 168 AERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
+ C IDK R RC CRF+KC+ GM E
Sbjct: 138 QDNCCEIDKQNRNRCQSCRFRKCISKGMLTE 168
>gi|395847192|ref|XP_003796267.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Otolemur garnettii]
gi|395847194|ref|XP_003796268.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Otolemur garnettii]
Length = 596
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 173 RLKKCLEMGMKME 185
>gi|324505916|gb|ADY42534.1| Ecdysone receptor [Ascaris suum]
Length = 496
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EELC VCGDK SGYHY LTCE CKGFF+R++ K VY C +C ID R++C CR
Sbjct: 127 EELCLVCGDKASGYHYNALTCEGCKGFFRRSITRKAVYYCKYGETCDIDMYMRRKCQHCR 186
Query: 187 FQKCLEVGMKLEV 199
+KC+E+GM+ E+
Sbjct: 187 LKKCMEIGMRPEL 199
>gi|297263121|ref|XP_001091445.2| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Macaca mulatta]
Length = 596
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 173 RLKKCLEMGMKME 185
>gi|224066723|ref|XP_002189996.1| PREDICTED: nuclear receptor subfamily 2 group C member 2
[Taeniopygia guttata]
Length = 629
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 146 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 205
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 206 RLKKCLEMGMKME 218
>gi|114585553|ref|XP_001158452.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 3
[Pan troglodytes]
gi|296225930|ref|XP_002758705.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Callithrix jacchus]
gi|297670033|ref|XP_002813184.1| PREDICTED: uncharacterized protein LOC100448384 isoform 1 [Pongo
abelii]
gi|390475359|ref|XP_003734943.1| PREDICTED: nuclear receptor subfamily 2 group C member 2
[Callithrix jacchus]
gi|397511831|ref|XP_003826268.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Pan paniscus]
gi|402887045|ref|XP_003906916.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Papio anubis]
gi|403268295|ref|XP_003926213.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Saimiri boliviensis boliviensis]
gi|410036591|ref|XP_003950084.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 [Pan
troglodytes]
gi|1351190|sp|P49116.1|NR2C2_HUMAN RecName: Full=Nuclear receptor subfamily 2 group C member 2;
AltName: Full=Orphan nuclear receptor TAK1; AltName:
Full=Orphan nuclear receptor TR4; AltName:
Full=Testicular receptor 4
gi|758382|gb|AAC50118.1| hTAK1 [Homo sapiens]
gi|119584619|gb|EAW64215.1| nuclear receptor subfamily 2, group C, member 2, isoform CRA_b
[Homo sapiens]
gi|158254612|dbj|BAF83279.1| unnamed protein product [Homo sapiens]
Length = 596
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 173 RLKKCLEMGMKME 185
>gi|350646662|emb|CCD58689.1| nuclear hormone receptor nor-1/nor-2, putative [Schistosoma mansoni]
Length = 1550
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRT+Q Y C+ ++C +DK +R RC +CRF
Sbjct: 969 QLCLVCGDNAACQHYGVRTCEGCKGFFKRTIQKNAQYVCLQAKNCVVDKRRRNRCQYCRF 1028
Query: 188 QKCLEVGMKLEV 199
QKCL+VGM EV
Sbjct: 1029 QKCLKVGMVKEV 1040
>gi|432888946|ref|XP_004075101.1| PREDICTED: retinoic acid receptor RXR-alpha-A [Oryzias latipes]
Length = 471
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 143 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCIIDKRQRNRCQYCRYQ 202
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 203 KCLAMGMKRE 212
>gi|73476623|gb|AAZ76384.1| nuclear receptor subfamily 4 group A member 2 variant NURR2c
[Rattus norvegicus]
Length = 437
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 197 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 256
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 257 FQKCLAVGMVKEV 269
>gi|355707885|gb|AES03095.1| nuclear receptor subfamily 2, group C, member 2 [Mustela putorius
furo]
Length = 609
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 126 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 185
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 186 RLKKCLEMGMKME 198
>gi|326928210|ref|XP_003210274.1| PREDICTED: nuclear receptor subfamily 2 group C member 2-like
[Meleagris gallopavo]
Length = 592
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 109 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 168
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 169 RLKKCLEMGMKME 181
>gi|344275981|ref|XP_003409789.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 [Loxodonta
africana]
Length = 616
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 133 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 192
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 193 RLKKCLEMGMKME 205
>gi|148233330|ref|NP_001079134.1| nuclear receptor subfamily 4 group A member 1 [Xenopus laevis]
gi|47938683|gb|AAH72138.1| Nr4a1-A protein [Xenopus laevis]
Length = 577
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
P + EG C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R
Sbjct: 239 PSSNEG---RCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRR 295
Query: 180 KRCPFCRFQKCLEVGMKLEV 199
RC FCRFQKCL VGM EV
Sbjct: 296 NRCQFCRFQKCLVVGMVKEV 315
>gi|548354|sp|Q04913.1|NR4A1_XENLA RecName: Full=Nuclear receptor subfamily 4 group A member 1;
AltName: Full=Nerve growth factor-induced protein I-B
homolog
gi|64917|emb|CAA50031.1| NGFI-B [Xenopus laevis]
Length = 577
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
P + EG C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R
Sbjct: 239 PSSNEG---RCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRR 295
Query: 180 KRCPFCRFQKCLEVGMKLEV 199
RC FCRFQKCL VGM EV
Sbjct: 296 NRCQFCRFQKCLVVGMVKEV 315
>gi|400270861|gb|AFP75253.1| nuclear receptor subfamily 2 group C member 2, partial [Tupaia
belangeri]
Length = 566
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 108 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 167
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 168 RLKKCLEMGMKME 180
>gi|432110921|gb|ELK34395.1| Nuclear receptor subfamily 2 group C member 2 [Myotis davidii]
Length = 596
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 173 RLKKCLEMGMKME 185
>gi|419590185|dbj|BAM66778.1| retinoid X receptor [Polyandrocarpa misakiensis]
Length = 539
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C VCGD+ SG HYG+ +CE C+GFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 191 ICAVCGDRASGKHYGVYSCEGCEGFFKRTVRKDLSYTCRDSKDCVIDKRQRNRCQYCRYQ 250
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 251 KCLAMGMKREA 261
>gi|417411925|gb|JAA52381.1| Putative nuclear receptor subfamily protein 2 group c member 2,
partial [Desmodus rotundus]
Length = 610
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 127 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 186
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 187 RLKKCLEMGMKME 199
>gi|62122587|dbj|BAD93255.1| RXRB [Oryzias latipes]
Length = 427
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 90 KRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCTVDKRQRNRCQYCR 149
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 150 YQKCLAMGMKRE 161
>gi|71051362|gb|AAH99003.1| Rxrb-A-prov protein, partial [Xenopus laevis]
Length = 458
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 113 IAATPEHPDTKE-GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERS 171
+ + P HP+ + LC +CGD+ SG HYG+ +CE CKGFFKRT++ YTC +
Sbjct: 119 MRSMPSHPNGGAVSGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDSKD 178
Query: 172 CHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C +DK QR RC +CR+QKCL GMK E
Sbjct: 179 CIVDKRQRNRCQYCRYQKCLATGMKREA 206
>gi|216409724|dbj|BAH02299.1| nuclear receptor subfamily 2, group C, member 2 [Homo sapiens]
Length = 596
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 173 RLKKCLEMGMKME 185
>gi|308501635|ref|XP_003113002.1| CRE-NHR-6 protein [Caenorhabditis remanei]
gi|308265303|gb|EFP09256.1| CRE-NHR-6 protein [Caenorhabditis remanei]
Length = 622
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 52/79 (65%)
Query: 121 DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK 180
+T +++C VC D+ HYG TCE CKGFFKRTVQ YTC ++C IDK R
Sbjct: 262 ETTHDADKMCAVCNDRAVCLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKNCPIDKRYRS 321
Query: 181 RCPFCRFQKCLEVGMKLEV 199
RC +CRFQKCLEVGM E+
Sbjct: 322 RCQYCRFQKCLEVGMVKEI 340
>gi|301771740|ref|XP_002921290.1| PREDICTED: nuclear receptor subfamily 2 group C member 2-like
[Ailuropoda melanoleuca]
Length = 611
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 128 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 187
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 188 RLKKCLEMGMKME 200
>gi|149728246|ref|XP_001491100.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Equus caballus]
Length = 611
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 128 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 187
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 188 RLKKCLEMGMKME 200
>gi|45708743|gb|AAH51670.1| NR2C2 protein [Homo sapiens]
gi|313882494|gb|ADR82733.1| Unknown protein [synthetic construct]
Length = 530
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 132 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 191
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 192 RLKKCLEMGMKME 204
>gi|327272700|ref|XP_003221122.1| PREDICTED: nuclear receptor subfamily 2 group C member 1-A-like
[Anolis carolinensis]
Length = 641
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 84 YLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYG 143
+L G + +S IS T +++ E T + +LC VCGDK SG HYG
Sbjct: 106 FLTTPDAAGVNQLFFTSPDISTQHIQILTDSSSTEQ--TLNKVFDLCVVCGDKASGRHYG 163
Query: 144 LLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMK 196
+TCE CKGFFKR+++ VY+C R C I+K R RC +CR Q+C+ GMK
Sbjct: 164 AVTCEGCKGFFKRSIRKNLVYSCRGTRDCVINKHHRNRCQYCRLQRCIAFGMK 216
>gi|126336217|ref|XP_001366331.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Monodelphis domestica]
Length = 596
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 173 RLKKCLEMGMKME 185
>gi|397499981|ref|XP_003820708.1| PREDICTED: nuclear receptor subfamily 4 group A member 3 [Pan
paniscus]
Length = 561
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 272 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 331
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 332 FQKCLSVGMVKEV 344
>gi|348505482|ref|XP_003440290.1| PREDICTED: retinoic acid receptor RXR-alpha-A-like [Oreochromis
niloticus]
Length = 781
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 107 PFHTSTIAATPEHPDTK--EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P P + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 429 PLGLNGVMKVPAQPSSTALSLTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 488
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 489 TCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKRE 522
>gi|291393486|ref|XP_002713082.1| PREDICTED: nuclear receptor subfamily 2, group C, member 2
[Oryctolagus cuniculus]
Length = 596
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 173 RLKKCLEMGMKME 185
>gi|449274063|gb|EMC83368.1| Nuclear receptor subfamily 2 group C member 2 [Columba livia]
Length = 596
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 173 RLKKCLEMGMKME 185
>gi|410951774|ref|XP_003982568.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Felis catus]
Length = 596
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 173 RLKKCLEMGMKME 185
>gi|49114890|gb|AAH73179.1| Rxrb-A-prov protein, partial [Xenopus laevis]
Length = 451
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 113 IAATPEHPDTKE-GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERS 171
+ + P HP+ + LC +CGD+ SG HYG+ +CE CKGFFKRT++ YTC +
Sbjct: 112 MRSMPSHPNGGAVSGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDSKD 171
Query: 172 CHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C +DK QR RC +CR+QKCL GMK E
Sbjct: 172 CIVDKRQRNRCQYCRYQKCLATGMKREA 199
>gi|83318203|gb|AAI08461.1| Rxrb-a protein [Xenopus laevis]
Length = 458
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 113 IAATPEHPDTKE-GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERS 171
+ + P HP+ + LC +CGD+ SG HYG+ +CE CKGFFKRT++ YTC +
Sbjct: 119 MRSMPSHPNGGAVSGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDSKD 178
Query: 172 CHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C +DK QR RC +CR+QKCL GMK E
Sbjct: 179 CIVDKRQRNRCQYCRYQKCLATGMKREA 206
>gi|350591453|ref|XP_003132435.3| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Sus scrofa]
Length = 596
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 173 RLKKCLEMGMKME 185
>gi|215539467|gb|AAI69986.1| Rxrb-a protein [Xenopus laevis]
Length = 445
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 113 IAATPEHPDTKE-GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERS 171
+ + P HP+ + LC +CGD+ SG HYG+ +CE CKGFFKRT++ YTC +
Sbjct: 106 MRSMPSHPNGGAVSGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDSKD 165
Query: 172 CHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C +DK QR RC +CR+QKCL GMK E
Sbjct: 166 CIVDKRQRNRCQYCRYQKCLATGMKREA 193
>gi|358251516|gb|AEU04707.1| retinoid X receptor alpha [Lateolabrax japonicus]
Length = 440
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 135 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKDCVIDKRQRNRCQYCRYQ 194
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 195 KCLAMGMKREA 205
>gi|281347589|gb|EFB23173.1| hypothetical protein PANDA_010183 [Ailuropoda melanoleuca]
Length = 572
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 89 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 148
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 149 RLKKCLEMGMKME 161
>gi|10198098|gb|AAG15183.1| nuclear receptor NHR-91 [Caenorhabditis elegans]
Length = 476
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 112 TIAATPEHPDTKEGIEE----LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCV 167
+I TP T + + LC VCGDK +G HYG TCE CKGFFKR+VQNKKVY C
Sbjct: 80 SILGTPTTDSTSNAVSKSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCS 139
Query: 168 AERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
+ C IDK R RC CRF+KC+ GM E
Sbjct: 140 QDNCCEIDKQNRNRCQSCRFRKCISKGMLTE 170
>gi|148230344|ref|NP_001080936.1| retinoid X receptor, beta [Xenopus laevis]
gi|840922|emb|CAA60792.1| retinoid X receptor beta [Xenopus laevis]
Length = 412
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 113 IAATPEHPDTKE-GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERS 171
+ + P HP+ + LC +CGD+ SG HYG+ +CE CKGFFKRT++ YTC +
Sbjct: 73 MRSMPSHPNGGAVSGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDSKD 132
Query: 172 CHIDKTQRKRCPFCRFQKCLEVGMKLE 198
C +DK QR RC +CR+QKCL GMK E
Sbjct: 133 CIVDKRQRNRCQYCRYQKCLATGMKRE 159
>gi|410903442|ref|XP_003965202.1| PREDICTED: retinoic acid receptor RXR-alpha-A-like [Takifugu
rubripes]
Length = 447
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 119 ICTICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQ 178
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 179 KCLAMGMKREA 189
>gi|350591455|ref|XP_003483272.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Sus scrofa]
Length = 609
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 126 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 185
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 186 RLKKCLEMGMKME 198
>gi|47060281|gb|AAT09759.1| neural orphan nuclear receptor NOR1 [Danio rerio]
Length = 593
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 55/85 (64%)
Query: 115 ATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHI 174
+ P P+ E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +
Sbjct: 239 SLPSPPNRTSSGERTCAVCGDNTACQHYGIGTCEGCKGFFKRTVQKNAKYVCLASKNCPV 298
Query: 175 DKTQRKRCPFCRFQKCLEVGMKLEV 199
DK +R RC +CRFQKCL VGM EV
Sbjct: 299 DKRRRNRCQYCRFQKCLSVGMVKEV 323
>gi|16797882|gb|AAL29199.1|AF323686_1 nuclear receptor AmNR6 [Acropora millepora]
Length = 340
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 51/69 (73%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ +C +CGD+ SG+HYG+ +CE CK FFKRTVQ + YTCV SC IDK R RC FCR
Sbjct: 8 KRICAICGDRSSGFHYGVQSCEGCKSFFKRTVQKQLHYTCVENMSCQIDKNNRIRCQFCR 67
Query: 187 FQKCLEVGM 195
FQKCL +GM
Sbjct: 68 FQKCLSLGM 76
>gi|355786362|gb|EHH66545.1| hypothetical protein EGM_03558, partial [Macaca fascicularis]
Length = 572
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 89 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 148
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 149 RLKKCLEMGMKME 161
>gi|21310109|gb|AAM46150.1|AF378828_1 nuclear orphan receptor TR2/4 [Branchiostoma floridae]
Length = 511
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 111 STIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 170
+++ TP DTK +ELC VCGDK SG HYG ++CE CKGFFKR+++ Y C + +
Sbjct: 5 NSVLFTPGSGDTKP--QELCVVCGDKASGRHYGAISCEGCKGFFKRSIRKNLGYVCRSSK 62
Query: 171 SCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
C I+K R RC +CR QKCL VGM+ E
Sbjct: 63 ECPINKHHRNRCQYCRLQKCLSVGMRSE 90
>gi|432856175|ref|XP_004068390.1| PREDICTED: retinoic acid receptor RXR-gamma-B [Oryzias latipes]
Length = 455
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 130 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKECLIDKRQRNRCQYCRYQ 189
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 190 KCLAMGMKREA 200
>gi|431916906|gb|ELK16662.1| Nuclear receptor subfamily 2 group C member 2 [Pteropus alecto]
Length = 596
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FCR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRL 174
Query: 188 QKCLEVGMKLE 198
+KCLE+GMK+E
Sbjct: 175 KKCLEMGMKME 185
>gi|313225640|emb|CBY07114.1| unnamed protein product [Oikopleura dioica]
Length = 494
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 111 STIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 170
ST T ++K+ E CPVCGD VSGYHYG+L+CESCKGFFKR VQ K Y C
Sbjct: 97 STSGTTTSRKESKQ--REPCPVCGDVVSGYHYGILSCESCKGFFKRIVQLNKRYFCSNHG 154
Query: 171 SCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
C I KT RK+C CR+ KC+ +GMK E
Sbjct: 155 QCTITKTTRKKCSSCRYDKCITLGMKRE 182
>gi|156387775|ref|XP_001634378.1| predicted protein [Nematostella vectensis]
gi|156221460|gb|EDO42315.1| predicted protein [Nematostella vectensis]
Length = 351
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P+H T E + C VCGDK +G HYG+ TCE CK FFKRTV+N YTC + +C ID+
Sbjct: 2 PKH-KTDERVA--CAVCGDKSTGKHYGVSTCEGCKSFFKRTVRNNTNYTCRGQNTCAIDR 58
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
R RCP CRFQKCL GMK E
Sbjct: 59 NSRSRCPSCRFQKCLSTGMKKE 80
>gi|147732610|sp|A2T929.2|RXRAA_DANRE RecName: Full=Retinoic acid receptor RXR-alpha-A; AltName:
Full=Nuclear receptor subfamily 2 group B member 1-A;
AltName: Full=RXRalpha-B; AltName: Full=Retinoid X
receptor alpha-A
Length = 430
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 102 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQ 161
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 162 KCLAMGMKRE 171
>gi|44885904|dbj|BAD12053.1| ultraspiracle protein [Lucilia sericata]
Length = 169
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 53/75 (70%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK QR RC +
Sbjct: 30 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDRNCIIDKRQRNRCQY 89
Query: 185 CRFQKCLEVGMKLEV 199
CR+QKCL GMK E
Sbjct: 90 CRYQKCLACGMKREA 104
>gi|410951776|ref|XP_003982569.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Felis catus]
Length = 615
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 132 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 191
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 192 RLKKCLEMGMKME 204
>gi|409194686|gb|AFV31633.1| retinoic X receptor gamma, partial [Acanthopagrus schlegelii]
Length = 453
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 128 ICSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKECLIDKRQRNRCQYCRYQ 187
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 188 KCLAMGMKREA 198
>gi|147899545|ref|NP_001084198.1| nuclear receptor subfamily 2 group C member 1-A [Xenopus laevis]
gi|82201033|sp|Q6GN21.1|N2C1A_XENLA RecName: Full=Nuclear receptor subfamily 2 group C member 1-A;
AltName: Full=Developmental orphan receptor 2-A;
Short=DOR2-A; Short=xDOR2-A; AltName: Full=Orphan
nuclear receptor TR2-A; AltName: Full=Testicular
receptor 2-A
gi|49118996|gb|AAH73700.1| DOR2 protein [Xenopus laevis]
Length = 637
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
ELC VCGDK SG HYG +TCE CKGFFKR+++ VYTC + C I+K R RC +CR
Sbjct: 150 ELCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRL 209
Query: 188 QKCLEVGMK 196
Q+C+ +GMK
Sbjct: 210 QRCMSLGMK 218
>gi|348554859|ref|XP_003463242.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 [Cavia
porcellus]
Length = 596
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCVINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 173 RLKKCLEMGMKME 185
>gi|324504735|gb|ADY42041.1| Ecdysone receptor [Ascaris suum]
Length = 544
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
EELC VCGDK SGYHY LTCE CKGFF+R++ K VY C +C ID R++C CR
Sbjct: 173 EELCLVCGDKASGYHYNALTCEGCKGFFRRSITRKAVYYCKYGETCDIDMYMRRKCQHCR 232
Query: 187 FQKCLEVGMKLE-VSSQSTHGVVVI 210
+KC+E+GM+ E + + S +VVI
Sbjct: 233 LKKCMEIGMRPERLRADSRVPLVVI 257
>gi|149412644|ref|XP_001506287.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Ornithorhynchus anatinus]
Length = 596
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 173 RLKKCLEMGMKME 185
>gi|238859643|ref|NP_001155023.1| retinoic acid receptor RXR-alpha-A [Danio rerio]
Length = 458
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 130 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQ 189
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 190 KCLAMGMKRE 199
>gi|1583309|prf||2120366D retinoid X receptor:ISOTYPE=gamma
Length = 391
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 65 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCMIDKRQRNRCQYCRYQ 124
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 125 KCLAMGMKRE 134
>gi|198285543|gb|ACH85310.1| retinoid x receptor beta a [Salmo salar]
Length = 373
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ +C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 26 KRMCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECLVDKRQRNRCQYCR 85
Query: 187 FQKCLEVGMKLEV 199
+QKCL +GMK EV
Sbjct: 86 YQKCLAMGMKREV 98
>gi|300796794|ref|NP_001178990.1| nuclear receptor subfamily 2 group C member 2 [Bos taurus]
gi|296474669|tpg|DAA16784.1| TPA: nuclear receptor subfamily 2 group C member 2-like [Bos
taurus]
gi|440903574|gb|ELR54213.1| Nuclear receptor subfamily 2 group C member 2 [Bos grunniens mutus]
Length = 611
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 128 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFC 187
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 188 RLKKCLEMGMKME 200
>gi|426249719|ref|XP_004018597.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 [Ovis
aries]
Length = 596
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCVINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 173 RLKKCLEMGMKME 185
>gi|66864090|dbj|BAD99296.1| ecdysone receptor A isoform [Leptinotarsa decemlineata]
Length = 565
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 79 MVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVS 138
M SY SP G DLS S + F + A + T EELC VCGD+ S
Sbjct: 149 MSSGSYDPYSPNGKLGREDLSPPS-SLNGFSADSCDAKKKKGPTPRQQEELCLVCGDRAS 207
Query: 139 GYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
GYHY LTCE CKGFF+R+V VY C +C ID R++C CR +KCL VGM+ E
Sbjct: 208 GYHYNALTCEGCKGFFRRSVTKNAVYKCKYGANCEIDMYMRRKCQECRLKKCLAVGMRAE 267
>gi|387017362|gb|AFJ50799.1| Nuclear receptor subfamily 4 group A member 1-like [Crotalus
adamanteus]
Length = 588
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 50/73 (68%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC FCR
Sbjct: 254 EGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCR 313
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 314 FQKCLAVGMVKEV 326
>gi|343958788|dbj|BAK63249.1| orphan nuclear receptor NR4A1 [Pan troglodytes]
Length = 598
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 90/195 (46%), Gaps = 22/195 (11%)
Query: 5 SQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNN 64
SQ +E + ++ K P+ P S TG +P + S SQ + LG
Sbjct: 164 SQTYEGLRAWTEQLPKASG-PPQPPAFFSFSPPTGP-SPSLAQSPLKLFPSQATHQLGEG 221
Query: 65 TSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKE 124
S S A PG T+ L +GI P TST A +
Sbjct: 222 ESYSMPTA---------------FPGLAPTSPHLEGSGILDAPV-TSTKARS----GAPG 261
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + +DK +R RC F
Sbjct: 262 GSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDRPVDKRRRNRCQF 321
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 322 CRFQKCLAVGMVKEV 336
>gi|68132000|gb|AAY85266.1| NOR1 [Danio rerio]
Length = 594
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 66/112 (58%), Gaps = 8/112 (7%)
Query: 89 PGGGSTNMDLSSAGISY-HPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGG + S G+ + P ++ + P + EG C VCGD + HYG+ TC
Sbjct: 220 PGG----LAFRSLGMGHCPPLLGESLPSPPNRTSSGEGT---CAVCGDNAACQHYGVRTC 272
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
E CKGFFKRTVQ Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 273 EGCKGFFKRTVQKNAKYVCLASKNCPVDKRRRNRCQYCRFQKCLSVGMVKEV 324
>gi|426339581|ref|XP_004033724.1| PREDICTED: nuclear receptor subfamily 2 group C member 2, partial
[Gorilla gorilla gorilla]
Length = 616
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 198 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 257
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 258 RLKKCLEMGMKME 270
>gi|289547504|ref|NP_001166100.1| nuclear receptor subfamily 4, group A, member 3 [Danio rerio]
Length = 594
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 66/112 (58%), Gaps = 8/112 (7%)
Query: 89 PGGGSTNMDLSSAGISY-HPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGG + S G+ + P ++ + P + EG C VCGD + HYG+ TC
Sbjct: 220 PGG----LAFRSLGMGHCPPLLGESLPSPPNRTSSGEGT---CAVCGDNAACQHYGVRTC 272
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
E CKGFFKRTVQ Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 273 EGCKGFFKRTVQKNAKYVCLASKNCPVDKRRRNRCQYCRFQKCLSVGMVKEV 324
>gi|149036769|gb|EDL91387.1| rCG56527, isoform CRA_b [Rattus norvegicus]
Length = 607
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 96/191 (50%), Gaps = 30/191 (15%)
Query: 28 TPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNNTSASAGGAGYNFNNMVDNSYLFQ 87
+P Q++S + +PQ D Q+ Q ++ T+ A G+ ++
Sbjct: 38 SPRIQIISTDSAVASPQRIQIVTDQQTGQKIQIV---TAVDASGSS-------KQQFILT 87
Query: 88 SP-GGGSTNMDLSSAGISYHP---FHTS-----------TIAATPEHPDTKEGIE----- 127
SP G G+ + L+S S F TS T +A+ E K ++
Sbjct: 88 SPDGAGTGKVILASPETSSAKQLIFTTSDNLVPGRIQIVTDSASVERLLGKADVQRPQVV 147
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FCR
Sbjct: 148 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRL 207
Query: 188 QKCLEVGMKLE 198
+KCLE+GMK+E
Sbjct: 208 KKCLEMGMKME 218
>gi|14133772|gb|AAK54127.1|AF367206_1 nuclear receptor nhr-7A [Dirofilaria immitis]
Length = 556
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 106 HPFHTSTIAATPE-HPDTKEGIE-ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKV 163
+P S AT E +PD+ + LC VCGDK SG+HYG+ CE CKGFF+R++Q +
Sbjct: 137 NPQSNSAQPATDELYPDSSTSTKPTLCKVCGDKSSGFHYGVTACEGCKGFFRRSIQKQME 196
Query: 164 YTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
Y C+ + CHI + R RC FCRF+KCL VGM
Sbjct: 197 YRCLRDGKCHIHRLNRNRCQFCRFRKCLAVGM 228
>gi|62859085|ref|NP_001016207.1| nuclear receptor subfamily 2 group C member 1 [Xenopus (Silurana)
tropicalis]
gi|123892381|sp|Q28CK1.1|NR2C1_XENTR RecName: Full=Nuclear receptor subfamily 2 group C member 1;
AltName: Full=Developmental orphan receptor 2;
Short=DOR2; AltName: Full=Orphan nuclear receptor TR2;
AltName: Full=Testicular receptor 2
gi|89268137|emb|CAJ83740.1| nuclear receptor subfamily 2, group C, member 1; orphan receptor,
TR2-11; nuclear receptor subfamily 2, group H, member 1;
developmental orphan receptor 2 [Xenopus (Silurana)
tropicalis]
gi|114108029|gb|AAI23035.1| nr2c1 protein [Xenopus (Silurana) tropicalis]
Length = 636
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
ELC VCGDK SG HYG +TCE CKGFFKR+++ VYTC + C I+K R RC +CR
Sbjct: 150 ELCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRL 209
Query: 188 QKCLEVGMK 196
Q+C+ +GMK
Sbjct: 210 QRCIALGMK 218
>gi|348504634|ref|XP_003439866.1| PREDICTED: retinoic acid receptor RXR-gamma-B-like isoform 1
[Oreochromis niloticus]
Length = 453
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 128 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECPIDKRQRNRCQYCRYQ 187
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 188 KCLAMGMKREA 198
>gi|47216868|emb|CAG11675.1| unnamed protein product [Tetraodon nigroviridis]
Length = 436
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 97 KRLCCICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCTVDKRQRNRCQYCR 156
Query: 187 FQKCLEVGMKLEV 199
+QKCL +GMK E
Sbjct: 157 YQKCLAMGMKREA 169
>gi|305958894|gb|ADM73292.1| estrogen-related receptor [Paranemertes peregrina]
Length = 484
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 118 EHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
E+P EG + +C VCGD SGYHYG+ +CE+CK FFKRTVQ Y C A+R C I KT
Sbjct: 103 EYPTGNEG-KRVCLVCGDVASGYHYGVASCEACKAFFKRTVQGNIDYNCPAQRGCEITKT 161
Query: 178 QRKRCPFCRFQKCLEVGM 195
+RK C CRF KCL VGM
Sbjct: 162 RRKSCQACRFTKCLRVGM 179
>gi|215026|gb|AAA50050.1| retinoic acid receptor alpha-2.B [Danio rerio]
Length = 457
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 50/69 (72%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C VC DK SGYHYG+ CE CKGFF+RT+Q VYTC E+SC I+K R RC +CR QK
Sbjct: 83 CFVCQDKSSGYHYGVSACEGCKGFFRRTIQKNMVYTCHREKSCIINKVTRNRCQYCRLQK 142
Query: 190 CLEVGMKLE 198
CLEVGM E
Sbjct: 143 CLEVGMSKE 151
>gi|181330916|ref|NP_001116766.1| nuclear receptor subfamily 2 group C member 2 [Danio rerio]
Length = 623
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FCR
Sbjct: 145 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKSLTYSCRSNQDCVINKHHRNRCQFCRL 204
Query: 188 QKCLEVGMKLE 198
+KCLE+GMK+E
Sbjct: 205 RKCLEMGMKME 215
>gi|1311505|gb|AAB36006.1| steroid/thyroid orphan receptor homolog gene [Homo sapiens]
Length = 684
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 347 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 406
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 407 FQKCLSVGMVKEV 419
>gi|443715399|gb|ELU07400.1| hypothetical protein CAPTEDRAFT_113501 [Capitella teleta]
Length = 88
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 127 EEL-CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
EEL C VCGD+ SG HYG++TCE CKGFFKRTVQNK+ YTC + C +DK R RC +C
Sbjct: 3 EELSCKVCGDQASGLHYGIVTCEGCKGFFKRTVQNKRAYTCNGKGHCPVDKAHRNRCQYC 62
Query: 186 RFQKCLEVGMKL 197
RF+KCL +GM L
Sbjct: 63 RFKKCLYMGMVL 74
>gi|18859345|ref|NP_571228.1| retinoic acid receptor RXR-alpha-B [Danio rerio]
gi|52783417|sp|Q90415.1|RXRAB_DANRE RecName: Full=Retinoic acid receptor RXR-alpha-B; AltName:
Full=Nuclear receptor subfamily 2 group B member 1-B;
AltName: Full=Retinoid X receptor alpha-B
gi|1046289|gb|AAC59719.1| retinoid X receptor [Danio rerio]
Length = 379
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 53 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCMIDKRQRNRCQYCRYQ 112
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 113 KCLAMGMKRE 122
>gi|268581873|ref|XP_002645920.1| C. briggsae CBR-NHR-91 protein [Caenorhabditis briggsae]
Length = 474
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 52/79 (65%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
P T + +LC VC DK +G HYG TCE CKGFFKR+VQNKKVY C + C IDK R
Sbjct: 88 PTTTDSTVKLCSVCADKSTGLHYGASTCEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQNR 147
Query: 180 KRCPFCRFQKCLEVGMKLE 198
RC CRF+KC+ GM E
Sbjct: 148 NRCQSCRFRKCISKGMLTE 166
>gi|14133778|gb|AAK54129.1|AF367208_1 nuclear receptor nhr-7C [Dirofilaria immitis]
Length = 463
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 106 HPFHTSTIAATPE-HPDTKEGIE-ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKV 163
+P S AT E +PD+ + LC VCGDK SG+HYG+ CE CKGFF+R++Q +
Sbjct: 137 NPQSNSAQPATDELYPDSSTSTKPTLCKVCGDKSSGFHYGVTACEGCKGFFRRSIQKQME 196
Query: 164 YTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
Y C+ + CHI + R RC FCRF+KCL VGM
Sbjct: 197 YRCLRDGKCHIHRLNRNRCQFCRFRKCLAVGM 228
>gi|5631312|dbj|BAA82618.1| retinoid X receptor [Polyandrocarpa misakiensis]
Length = 363
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 51/70 (72%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C VCGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 15 ICAVCGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDSKDCVIDKRQRNRCQYCRYQ 74
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 75 KCLAMGMKRE 84
>gi|351695773|gb|EHA98691.1| Nuclear receptor subfamily 2 group C member 2 [Heterocephalus
glaber]
Length = 616
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 133 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCVINKHHRNRCQFC 192
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 193 RLKKCLEMGMKME 205
>gi|399498497|ref|NP_077364.2| nuclear receptor subfamily 4 group A member 1 [Rattus norvegicus]
gi|1709263|sp|P22829.2|NR4A1_RAT RecName: Full=Nuclear receptor subfamily 4 group A member 1;
AltName: Full=NUR77; AltName: Full=Nerve growth
factor-induced protein I-B; Short=NGFI-B; AltName:
Full=Orphan nuclear receptor HMR
gi|149031991|gb|EDL86903.1| nuclear receptor subfamily 4, group A, member 1 [Rattus norvegicus]
Length = 597
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 49/70 (70%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQK
Sbjct: 266 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQFCRFQK 325
Query: 190 CLEVGMKLEV 199
CL VGM EV
Sbjct: 326 CLAVGMVKEV 335
>gi|390458196|ref|XP_002743183.2| PREDICTED: nuclear receptor subfamily 4 group A member 3
[Callithrix jacchus]
Length = 968
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 631 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 690
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 691 FQKCLSVGMVKEV 703
>gi|596054|gb|AAA56770.1| NGFI-B [Rattus norvegicus]
gi|133777128|gb|AAH97313.2| Nuclear receptor subfamily 4, group A, member 1 [Rattus norvegicus]
Length = 563
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ + ++GI P + +T + G E C VCGD S HYG+ TCE
Sbjct: 196 PGLAPTSPNCDTSGILDAP-----VTSTKARSGSSGGSEGRCAVCGDNASCQHYGVRTCE 250
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 251 GCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 301
>gi|359320752|ref|XP_003639411.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor subfamily 4 group
A member 3 [Canis lupus familiaris]
Length = 999
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 662 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 721
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 722 FQKCLSVGMVKEV 734
>gi|124001363|emb|CAF21855.1| ultraspiracle protein homolog of mammalian RXR, partial
[Periplaneta americana]
gi|124001365|emb|CAF21856.1| ultraspiracle protein homolog of mammalian RXR, partial
[Periplaneta australasiae]
gi|124001367|emb|CAF21857.1| ultraspiracle protein homolog of mammalian RXR, partial
[Periplaneta brunnea]
gi|124001369|emb|CAF21858.1| ultraspiracle protein homolog of mammalian RXR, partial
[Periplaneta fuliginosa]
gi|124001373|emb|CAF21860.1| ultraspiracle protein homolog of mammalian RXR, partial [Blatta
orientalis]
Length = 279
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK QR RC +
Sbjct: 4 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCIIDKRQRNRCQY 63
Query: 185 CRFQKCLEVGMKLE 198
CR+QKCL +GMK E
Sbjct: 64 CRYQKCLGMGMKRE 77
>gi|403298735|ref|XP_003940164.1| PREDICTED: nuclear receptor subfamily 4 group A member 3 [Saimiri
boliviensis boliviensis]
Length = 635
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 298 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 357
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 358 FQKCLSVGMVKEV 370
>gi|324514717|gb|ADY45963.1| Retinoic acid receptor RXR-gamma, partial [Ascaris suum]
Length = 473
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 118 EHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
EHP T + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y+C R+C IDK
Sbjct: 128 EHPLT--SAKHICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYSCRENRNCVIDKR 185
Query: 178 QRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR++KC +GMK E
Sbjct: 186 QRNRCQYCRYRKCKNMGMKRE 206
>gi|194277579|gb|AAR28090.2| nuclear hormone receptor 4A protein [Schistosoma mansoni]
Length = 827
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRT+Q Y C+ ++C +DK +R RC +CRF
Sbjct: 246 QLCLVCGDNAACQHYGVRTCEGCKGFFKRTIQKNAQYVCLQAKNCVVDKRRRNRCQYCRF 305
Query: 188 QKCLEVGMKLEV 199
QKCL+VGM EV
Sbjct: 306 QKCLKVGMVKEV 317
>gi|62860048|ref|NP_001015937.1| retinoid X receptor, beta [Xenopus (Silurana) tropicalis]
gi|89268107|emb|CAJ83850.1| Retinoic acid receptor RXR-beta (Retinoid X receptor beta) [Xenopus
(Silurana) tropicalis]
Length = 449
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 51/72 (70%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRT++ YTC + C +DK QR RC +CR
Sbjct: 125 KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCIVDKRQRNRCQYCR 184
Query: 187 FQKCLEVGMKLE 198
+QKCL GMK E
Sbjct: 185 YQKCLATGMKRE 196
>gi|47213822|emb|CAF95413.1| unnamed protein product [Tetraodon nigroviridis]
Length = 290
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 42 ICTICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQ 101
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 102 KCLAMGMKRE 111
>gi|189066517|dbj|BAG35767.1| unnamed protein product [Homo sapiens]
Length = 463
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLEV 199
QR RC +C +QKCL +GMK E
Sbjct: 186 RQRNRCQYCCYQKCLVMGMKREA 208
>gi|56131040|gb|AAV80236.1| TR4/TR2 [Schistosoma mansoni]
Length = 1943
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E C VCGDK SG HYG+++CE CKGFFKR+++ Y C +E++C ++K R RC +CR
Sbjct: 602 EPCKVCGDKASGRHYGVVSCEGCKGFFKRSIRGHVSYVCRSEQNCLVNKAYRNRCQYCRL 661
Query: 188 QKCLEVGMKLEV 199
QKCL VGM+ E
Sbjct: 662 QKCLAVGMRSEA 673
>gi|348533852|ref|XP_003454418.1| PREDICTED: retinoic acid receptor RXR-beta-A-like isoform 3
[Oreochromis niloticus]
Length = 434
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 87 KRLCVICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECLVDKRQRNRCQYCR 146
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 147 YQKCLAMGMKRE 158
>gi|221042712|dbj|BAH13033.1| unnamed protein product [Homo sapiens]
Length = 609
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTV+ Y C+A ++C +DK +R RC +CR
Sbjct: 271 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVKKNAKYVCLANKNCPVDKRRRNRCQYCR 330
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 331 FQKCLAVGMVKEV 343
>gi|47222872|emb|CAF96539.1| unnamed protein product [Tetraodon nigroviridis]
Length = 591
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 50/73 (68%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+ ++C +DK +R RC FCR
Sbjct: 250 ESRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYMCLTNKNCPVDKRRRNRCQFCR 309
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 310 FQKCLAVGMVKEV 322
>gi|348569978|ref|XP_003470774.1| PREDICTED: nuclear receptor subfamily 4 group A member 3-like
[Cavia porcellus]
Length = 788
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 451 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 510
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 511 FQKCLSVGMVKEV 523
>gi|327275047|ref|XP_003222285.1| PREDICTED: nuclear receptor subfamily 4 group A member 3-like,
partial [Anolis carolinensis]
Length = 614
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 272 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 331
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 332 FQKCLSVGMVKEV 344
>gi|2529508|gb|AAB81178.1| developmental orphan receptor 2 [Xenopus laevis]
Length = 542
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
ELC VCGDK SG HYG +TCE CKGFFKR+++ VYTC + C I+K R RC +CR
Sbjct: 123 ELCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRL 182
Query: 188 QKCLEVGMK 196
Q+C+ +GMK
Sbjct: 183 QRCMSLGMK 191
>gi|348533850|ref|XP_003454417.1| PREDICTED: retinoic acid receptor RXR-beta-A-like isoform 2
[Oreochromis niloticus]
Length = 426
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 87 KRLCVICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECLVDKRQRNRCQYCR 146
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 147 YQKCLAMGMKRE 158
>gi|395515403|ref|XP_003761894.1| PREDICTED: nuclear receptor subfamily 4 group A member 3
[Sarcophilus harrisii]
Length = 756
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 414 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 473
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 474 FQKCLNVGMVKEV 486
>gi|218156204|dbj|BAH03334.1| retinoic acid receptor 2 [Lethenteron camtschaticum]
Length = 479
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 74/137 (54%), Gaps = 26/137 (18%)
Query: 84 YLFQSPGGGSTNMDLSSAGISYHPFHTSTIA--ATPEHPDTKE----GIEEL-------- 129
+LF GGG+ M G HP H +++ +TP P T E G EE+
Sbjct: 27 FLFSGSGGGA--MSPQRLG-GLHPLHQMSVSGYSTPS-PATVESQSSGSEEIIPSPPSPL 82
Query: 130 --------CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
C VC DK SGYHYG+ +CE CKGFF+R++Q VYTC ++ C I+K R R
Sbjct: 83 PPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCPRDKGCVINKVTRNR 142
Query: 182 CPFCRFQKCLEVGMKLE 198
C +CR QKC EVGM E
Sbjct: 143 CQYCRLQKCFEVGMSKE 159
>gi|301758244|ref|XP_002914990.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor subfamily 4 group
A member 3-like [Ailuropoda melanoleuca]
Length = 658
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 321 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 380
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 381 FQKCLSVGMVKEV 393
>gi|301087323|gb|ADK60866.1| retinoid X receptor [Haliotis diversicolor]
Length = 441
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C +++C IDK QR RC +CR+
Sbjct: 122 ICAICGDRASGKHYGVYSCEGCKGFFKRTVRKELTYACRDDKNCMIDKRQRNRCQYCRYM 181
Query: 189 KCLEVGMKLEVSSQSTHGV 207
KCL +GMK E + V
Sbjct: 182 KCLSMGMKREAVQEERQRV 200
>gi|156374224|ref|XP_001629708.1| predicted protein [Nematostella vectensis]
gi|156216714|gb|EDO37645.1| predicted protein [Nematostella vectensis]
Length = 366
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 60/92 (65%)
Query: 107 PFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTC 166
P T T +T D+++ ++ C VCGDK SG HYG+ TCE CK FFKR+V+ YTC
Sbjct: 5 PVTTWTRDSTETPEDSEKNVQVECAVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLTYTC 64
Query: 167 VAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
A R C ID+ R +C +CR +KCL+VGM+ E
Sbjct: 65 RASRDCPIDQHHRNQCQYCRLKKCLKVGMRRE 96
>gi|115394376|gb|ABI97120.1| estrogen receptor-related receptor [Marisa cornuarietis]
Length = 424
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 6/119 (5%)
Query: 81 DNSYLFQSPGGGSTN-MDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSG 139
D SY SP G+ + + + + I + +ST+ + + PD ++ LC VCGD SG
Sbjct: 44 DRSYQGDSPESGNISPVSIENGKIDFC--SSSTVCSDQDSPDE---LKRLCLVCGDVASG 98
Query: 140 YHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
YHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CRFQKCL VGM E
Sbjct: 99 YHYGVSSCEACKAFFKRTIQGNIEYSCPASGECEITKRRRKACQACRFQKCLRVGMLRE 157
>gi|268572989|ref|XP_002641472.1| C. briggsae CBR-NHR-6 protein [Caenorhabditis briggsae]
Length = 576
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 120 PDTKEGIEE-------LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
P T GI++ +C VC D+ HYG TCE CKGFFKRTVQ YTC ++C
Sbjct: 208 PPTPFGIQDEVLDADKMCAVCNDRAVCLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKNC 267
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLEV 199
IDK R RC +CRFQKCLEVGM E+
Sbjct: 268 PIDKRYRSRCQYCRFQKCLEVGMVKEI 294
>gi|124001371|emb|CAF21859.1| ultraspiracle protein homolog of mammalian RXR, partial
[Periplaneta japonica]
Length = 279
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK QR RC +
Sbjct: 4 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCIIDKRQRNRCQY 63
Query: 185 CRFQKCLEVGMKLE 198
CR+QKCL +GMK E
Sbjct: 64 CRYQKCLGMGMKRE 77
>gi|432908440|ref|XP_004077862.1| PREDICTED: retinoic acid receptor RXR-beta-A [Oryzias latipes]
Length = 443
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 87 KRLCVICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECLVDKRQRNRCQYCR 146
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 147 YQKCLAMGMKRE 158
>gi|363730515|ref|XP_419081.3| PREDICTED: nuclear receptor subfamily 4 group A member 3 [Gallus
gallus]
Length = 609
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 267 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 326
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 327 FQKCLSVGMVKEV 339
>gi|348533848|ref|XP_003454416.1| PREDICTED: retinoic acid receptor RXR-beta-A-like isoform 1
[Oreochromis niloticus]
Length = 412
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 87 KRLCVICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECLVDKRQRNRCQYCR 146
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 147 YQKCLAMGMKRE 158
>gi|410926023|ref|XP_003976478.1| PREDICTED: retinoic acid receptor RXR-beta-A-like isoform 2
[Takifugu rubripes]
Length = 463
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 124 KRLCCICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCTVDKRQRNRCQYCR 183
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 184 YQKCLAMGMKRE 195
>gi|33468584|emb|CAE30390.1| novel protein similar to human and rodent nuclear receptor
subfamily 6, group A, member 1 (NR6A1) [Danio rerio]
gi|68131998|gb|AAY85265.1| GCNF-B, partial [Danio rerio]
Length = 419
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 55/72 (76%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
+G E C +CGD+ SG HYG+++CE CKGFFKR++ NK++Y C +++C + + QR RC
Sbjct: 1 DGGERWCLICGDRASGLHYGIISCEGCKGFFKRSICNKRIYRCNRDKNCQMSRKQRNRCQ 60
Query: 184 FCRFQKCLEVGM 195
+CR QKCL++GM
Sbjct: 61 YCRLQKCLQMGM 72
>gi|339236037|ref|XP_003379573.1| retinoic acid receptor RXR-alpha [Trichinella spiralis]
gi|316977756|gb|EFV60819.1| retinoic acid receptor RXR-alpha [Trichinella spiralis]
Length = 502
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P HP + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC R C IDK
Sbjct: 163 PSHPLALP--KHVCNICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYTCRESRHCVIDK 220
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 221 RQRNRCQYCRYQKCLIMGMKRE 242
>gi|47060285|gb|AAT09761.1| neural orphan nuclear receptor Nurr1 [Danio rerio]
Length = 584
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Query: 82 NSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYH 141
+S+ +P + LS + HP S +A +P+ + E LC VCGD + H
Sbjct: 212 DSFALPAPPRKQHGVGLSHSLNVGHPLLESPVA-SPQARGSPSS-EGLCAVCGDNAACQH 269
Query: 142 YGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
YG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CRFQKCL VGM
Sbjct: 270 YGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLVVGM 323
>gi|332222892|ref|XP_003260605.1| PREDICTED: nuclear receptor subfamily 4 group A member 3 [Nomascus
leucogenys]
Length = 443
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 289 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 348
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 349 FQKCLSVGMVKEV 361
>gi|313216025|emb|CBY37413.1| unnamed protein product [Oikopleura dioica]
Length = 341
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 51/71 (71%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E CPVCGD VSGYHYG+L+CESCKGFFKR VQ K Y C C I KT RK+C CR+
Sbjct: 114 EPCPVCGDVVSGYHYGILSCESCKGFFKRIVQLNKRYFCSNHGQCTITKTTRKKCSSCRY 173
Query: 188 QKCLEVGMKLE 198
KC+ +GMK E
Sbjct: 174 DKCITLGMKRE 184
>gi|68132036|gb|AAY85284.1| RXRalpha-B [Danio rerio]
Length = 365
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 37 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQ 96
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 97 KCLAMGMKRE 106
>gi|431909857|gb|ELK12959.1| Nuclear receptor subfamily 4 group A member 3 [Pteropus alecto]
Length = 633
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 296 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 355
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 356 FQKCLSVGMVKEV 368
>gi|189442705|gb|AAI67577.1| rxrb protein [Xenopus (Silurana) tropicalis]
Length = 412
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 51/72 (70%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRT++ YTC + C +DK QR RC +CR
Sbjct: 88 KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCIVDKRQRNRCQYCR 147
Query: 187 FQKCLEVGMKLE 198
+QKCL GMK E
Sbjct: 148 YQKCLATGMKRE 159
>gi|47226349|emb|CAG09317.1| unnamed protein product [Tetraodon nigroviridis]
Length = 636
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 51/72 (70%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E +C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC FCR
Sbjct: 262 EGVCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQFCR 321
Query: 187 FQKCLEVGMKLE 198
FQKCL VGM E
Sbjct: 322 FQKCLVVGMVRE 333
>gi|197304231|dbj|BAG69193.1| retinoid X receptor gamma [Coturnix japonica]
Length = 122
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK QR RC +CR+Q
Sbjct: 4 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQ 63
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 64 KCLAMGMKREA 74
>gi|426362505|ref|XP_004048402.1| PREDICTED: nuclear receptor subfamily 4 group A member 3 [Gorilla
gorilla gorilla]
Length = 573
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 236 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 295
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 296 FQKCLSVGMVKEV 308
>gi|390340005|ref|XP_003725146.1| PREDICTED: nuclear receptor subfamily 4 group A member 1-like
isoform 2 [Strongylocentrotus purpuratus]
Length = 730
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 116 TPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHID 175
TP ++EG +C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +D
Sbjct: 384 TPPRTPSQEG---MCAVCGDSAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCTVD 440
Query: 176 KTQRKRCPFCRFQKCLEVGMKLEV 199
K +R RC +CRFQKCL GM EV
Sbjct: 441 KRRRNRCQYCRFQKCLACGMVKEV 464
>gi|195431122|ref|XP_002063597.1| GK21996 [Drosophila willistoni]
gi|194159682|gb|EDW74583.1| GK21996 [Drosophila willistoni]
Length = 840
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 6/131 (4%)
Query: 74 YNFNN-----MVDNSYLFQSPGGGSTNMDLS-SAGISYHPFHTSTIAATPEHPDTKEGIE 127
YN +N M SY SP G + DLS S+ ++ + + A + E
Sbjct: 150 YNMSNGYASPMSAGSYDPYSPNGKTGRDDLSPSSSLNGYSANEGCDAKKSKKGPAPRVQE 209
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
ELC VCGD+ SGYHY LTCE CKGFF+R+V VY C R+C +D R++C CR
Sbjct: 210 ELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRL 269
Query: 188 QKCLEVGMKLE 198
+KCL VGM+ E
Sbjct: 270 KKCLAVGMRPE 280
>gi|27894359|ref|NP_775291.1| nuclear receptor subfamily 4 group A member 3 isoform c [Homo
sapiens]
gi|1165105|emb|CAA61984.1| nuclear receptor [Homo sapiens]
gi|1586174|prf||2203316A TEC gene
Length = 443
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 289 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 348
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 349 FQKCLSVGMVKEV 361
>gi|256090626|ref|XP_002581285.1| Tr4/Tr2 (homologue) [Schistosoma mansoni]
Length = 1532
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E C VCGDK SG HYG+++CE CKGFFKR+++ Y C +E++C ++K R RC +CR
Sbjct: 547 EPCKVCGDKASGRHYGVVSCEGCKGFFKRSIRGHVSYVCRSEQNCLVNKAYRNRCQYCRL 606
Query: 188 QKCLEVGMKLEV 199
QKCL VGM+ E
Sbjct: 607 QKCLAVGMRSEA 618
>gi|390340003|ref|XP_003725145.1| PREDICTED: nuclear receptor subfamily 4 group A member 1-like
isoform 1 [Strongylocentrotus purpuratus]
gi|390340007|ref|XP_786266.3| PREDICTED: nuclear receptor subfamily 4 group A member 1-like
isoform 3 [Strongylocentrotus purpuratus]
Length = 724
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 116 TPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHID 175
TP ++EG +C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +D
Sbjct: 378 TPPRTPSQEG---MCAVCGDSAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCTVD 434
Query: 176 KTQRKRCPFCRFQKCLEVGMKLEV 199
K +R RC +CRFQKCL GM EV
Sbjct: 435 KRRRNRCQYCRFQKCLACGMVKEV 458
>gi|347360576|emb|CCA61271.1| retinoid X receptor, isoform S [Lithobius peregrinus]
Length = 305
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK QR RC +CR+Q
Sbjct: 4 FCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDRNCVIDKRQRNRCQYCRYQ 63
Query: 189 KCLEVGMKLEVSSQS 203
KCL +GMK E +
Sbjct: 64 KCLSMGMKREAVQEE 78
>gi|156387534|ref|XP_001634258.1| predicted protein [Nematostella vectensis]
gi|156221339|gb|EDO42195.1| predicted protein [Nematostella vectensis]
Length = 344
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ +C +CGD+ SG+HYG+ +CE CK FFKRTVQ + Y CV +SC IDK R RC +CR
Sbjct: 11 QRVCAICGDRSSGFHYGVQSCEGCKSFFKRTVQKQLQYACVESKSCQIDKNNRIRCQYCR 70
Query: 187 FQKCLEVGM 195
FQKCL +GM
Sbjct: 71 FQKCLALGM 79
>gi|119579320|gb|EAW58916.1| nuclear receptor subfamily 4, group A, member 3, isoform CRA_b
[Homo sapiens]
Length = 454
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 300 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 359
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 360 FQKCLSVGMVKEV 372
>gi|148230541|ref|NP_001087654.1| nuclear receptor subfamily 2 group C member 1-B [Xenopus laevis]
gi|82198455|sp|Q66J63.1|N2C1B_XENLA RecName: Full=Nuclear receptor subfamily 2 group C member 1-B;
AltName: Full=Developmental orphan receptor 2-B;
Short=DOR2-B; Short=xDOR2-B; AltName: Full=Orphan
nuclear receptor TR2-B; AltName: Full=Testicular
receptor 2-B
gi|51703645|gb|AAH81046.1| MGC81787 protein [Xenopus laevis]
Length = 637
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 50/69 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
ELC VCGDK SG HYG +TCE CKGFFKR+++ +YTC + C I+K R RC +CR
Sbjct: 150 ELCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLIYTCRGSKDCVINKHYRNRCQYCRL 209
Query: 188 QKCLEVGMK 196
Q+C+ +GMK
Sbjct: 210 QRCISLGMK 218
>gi|347360572|emb|CCA61269.1| retinoid X receptor, isoform L [Lithobius peregrinus]
Length = 326
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK QR RC +CR+Q
Sbjct: 4 FCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDRNCVIDKRQRNRCQYCRYQ 63
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 64 KCLSMGMKRE 73
>gi|347360574|emb|CCA61270.1| retinoid X receptor, isoform M [Lithobius peregrinus]
Length = 320
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +R+C IDK QR RC +CR+Q
Sbjct: 4 FCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDRNCVIDKRQRNRCQYCRYQ 63
Query: 189 KCLEVGMKLEVSSQS 203
KCL +GMK E +
Sbjct: 64 KCLSMGMKREAVQEE 78
>gi|307194605|gb|EFN76894.1| Retinoic acid receptor RXR-alpha-A [Harpegnathos saltator]
Length = 389
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 67/111 (60%), Gaps = 9/111 (8%)
Query: 88 SPGGGSTNMDLSSAGISYHPFHTS------TIAA-TPEHPDTKEGIEELCPVCGDKVSGY 140
SP GG + +AG + TS T+A P HP + G + LC +CGD+ SG
Sbjct: 46 SPSGGPNSPGSFNAGCHSNLLSTSPSGQSKTVAPYPPNHPLS--GSKHLCSICGDRASGK 103
Query: 141 HYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCL 191
HYG+ +CE CKGFFKRTV+ Y C E+SC IDK QR RC +CR+QKCL
Sbjct: 104 HYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRNRCQYCRYQKCL 154
>gi|341884573|gb|EGT40508.1| CBN-NHR-91 protein [Caenorhabditis brenneri]
Length = 482
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 50/71 (70%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
++C VCGDK +G HYG TCE CKGFFKR+VQNKKVY C E C IDK R RC CRF
Sbjct: 104 KICSVCGDKSTGLHYGASTCEGCKGFFKRSVQNKKVYHCSQENCCEIDKQNRNRCQSCRF 163
Query: 188 QKCLEVGMKLE 198
+KC+ GM E
Sbjct: 164 RKCISKGMLTE 174
>gi|74902124|sp|Q5I7G2.1|RXR_LYMST RecName: Full=Retinoic acid receptor RXR; AltName: Full=Retinoid X
receptor; Short=LymRXR
gi|57164664|gb|AAW34268.1| retinoid X receptor [Lymnaea stagnalis]
Length = 436
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 59/94 (62%)
Query: 114 AATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCH 173
+ +P P + + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C
Sbjct: 101 SPSPGLPHSSLHTKHICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDDKNCM 160
Query: 174 IDKTQRKRCPFCRFQKCLEVGMKLEVSSQSTHGV 207
IDK QR RC +CR+ KCL +GMK E + V
Sbjct: 161 IDKRQRNRCQYCRYMKCLSMGMKREAVQEERQRV 194
>gi|350644434|emb|CCD60831.1| nuclear hormone receptor,putative [Schistosoma mansoni]
Length = 1592
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E C VCGDK SG HYG+++CE CKGFFKR+++ Y C +E++C ++K R RC +CR
Sbjct: 602 EPCKVCGDKASGRHYGVVSCEGCKGFFKRSIRGHVSYVCRSEQNCLVNKAYRNRCQYCRL 661
Query: 188 QKCLEVGMKLEV 199
QKCL VGM+ E
Sbjct: 662 QKCLAVGMRSEA 673
>gi|334333364|ref|XP_003341711.1| PREDICTED: nuclear receptor subfamily 4 group A member 3-like
[Monodelphis domestica]
Length = 782
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 440 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 499
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 500 FQKCLNVGMVKEV 512
>gi|20302778|gb|AAM18898.1|AF391296_1 unknown [Branchiostoma floridae]
Length = 182
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 50/71 (70%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R C IDK QR RC +CR+Q
Sbjct: 63 ICQICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDNRDCVIDKRQRNRCQYCRYQ 122
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 123 KCLAMGMKREA 133
>gi|340025441|gb|AEK27051.1| retinoid X receptor gamma [Lateolabrax japonicus]
Length = 453
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 128 ICSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDSKECVIDKRQRNRCQYCRYQ 187
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 188 KCLAMGMKREA 198
>gi|297478017|ref|XP_002689787.1| PREDICTED: nuclear receptor subfamily 4 group A member 3 [Bos
taurus]
gi|358413548|ref|XP_002684287.2| PREDICTED: nuclear receptor subfamily 4 group A member 3 [Bos
taurus]
gi|296484634|tpg|DAA26749.1| TPA: nuclear receptor subfamily 4, group A, member 3 [Bos taurus]
Length = 648
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 311 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 370
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 371 FQKCLSVGMVKEV 383
>gi|256052096|ref|XP_002569614.1| nuclear hormone receptor nor-1/nor-2 [Schistosoma mansoni]
Length = 704
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VCGD + HYG+ TCE CKGFFKRT+Q Y C+ ++C +DK +R RC +CRF
Sbjct: 246 QLCLVCGDNAACQHYGVRTCEGCKGFFKRTIQKNAQYVCLQAKNCVVDKRRRNRCQYCRF 305
Query: 188 QKCLEVGMKLEV 199
QKCL+VGM EV
Sbjct: 306 QKCLKVGMVKEV 317
>gi|449272865|gb|EMC82579.1| Nuclear receptor subfamily 4 group A member 3 [Columba livia]
Length = 609
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 50/70 (71%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CRFQK
Sbjct: 270 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQK 329
Query: 190 CLEVGMKLEV 199
CL VGM EV
Sbjct: 330 CLSVGMVKEV 339
>gi|50539758|ref|NP_001002345.1| retinoic acid receptor RXR-gamma-B [Danio rerio]
gi|82200328|sp|Q6DHP9.1|RXRGB_DANRE RecName: Full=Retinoic acid receptor RXR-gamma-B; AltName:
Full=Nuclear receptor subfamily 2 group B member 3-B;
AltName: Full=Retinoid X receptor gamma-B
gi|49902731|gb|AAH75918.1| Zgc:92183 [Danio rerio]
gi|124054092|gb|ABM89230.1| retinoid X receptor gamma b [Danio rerio]
Length = 452
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRT++ YTC + C IDK QR RC +CR+Q
Sbjct: 127 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDIKECLIDKRQRNRCQYCRYQ 186
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 187 KCLAMGMKREA 197
>gi|351714484|gb|EHB17403.1| Nuclear receptor ROR-beta [Heterocephalus glaber]
Length = 510
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 120 PDTKEGIEEL-CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQ 178
PD IE + C +CGDK SG HYG++TCE CKGFF+R+ QN Y+C +R+C ID+T
Sbjct: 10 PDATAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTN 69
Query: 179 RKRCPFCRFQKCLEVGM 195
R RC CR QKCL +GM
Sbjct: 70 RNRCQHCRLQKCLALGM 86
>gi|348572976|ref|XP_003472268.1| PREDICTED: nuclear receptor ROR-beta-like [Cavia porcellus]
Length = 470
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 120 PDTKEGIEEL-CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQ 178
PD IE + C +CGDK SG HYG++TCE CKGFF+R+ QN Y+C +R+C ID+T
Sbjct: 10 PDATAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTN 69
Query: 179 RKRCPFCRFQKCLEVGM 195
R RC CR QKCL +GM
Sbjct: 70 RNRCQHCRLQKCLALGM 86
>gi|345327919|ref|XP_001505930.2| PREDICTED: retinoic acid receptor beta-like [Ornithorhynchus
anatinus]
Length = 527
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 56/83 (67%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C VC DK SGYHYG+ CE CKGFF+R++Q +YTC +++C I+K R RC +CR QK
Sbjct: 88 CFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQK 147
Query: 190 CLEVGMKLEVSSQSTHGVVVIWS 212
C EVGM E+ S V+V+ S
Sbjct: 148 CFEVGMSKELKSPLKAKVLVLLS 170
>gi|297270523|ref|XP_001109185.2| PREDICTED: nuclear receptor subfamily 4 group A member 3 isoform 1
[Macaca mulatta]
Length = 637
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 300 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 359
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 360 FQKCLSVGMVKEV 372
>gi|291382905|ref|XP_002708195.1| PREDICTED: nuclear receptor subfamily 4, group A, member 3
[Oryctolagus cuniculus]
Length = 669
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 332 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 391
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 392 FQKCLSVGMVKEV 404
>gi|6176566|gb|AAF05623.1|AF191212_1 orphan nuclear receptor TECdeltaC short isoform [Mus musculus]
Length = 429
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 290 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 349
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 350 FQKCLSVGMVKEV 362
>gi|170586095|ref|XP_001897816.1| nuclear receptor RXR [Brugia malayi]
gi|158594755|gb|EDP33336.1| nuclear receptor RXR, putative [Brugia malayi]
Length = 266
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ +Y C R+C IDK QR RC +CR++
Sbjct: 131 ICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLIYLCRENRNCIIDKRQRNRCQYCRYR 190
Query: 189 KCLEVGMKLEV 199
KC +GMK E
Sbjct: 191 KCQSMGMKREA 201
>gi|156330425|ref|XP_001619117.1| hypothetical protein NEMVEDRAFT_v1g152310 [Nematostella vectensis]
gi|156201647|gb|EDO27017.1| predicted protein [Nematostella vectensis]
Length = 261
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ +C +CGD+ SG+HYG+ +CE CK FFKRTVQ + Y CV +SC IDK R RC +CR
Sbjct: 11 QRVCAICGDRSSGFHYGVQSCEGCKSFFKRTVQKQLQYACVESKSCQIDKNNRIRCQYCR 70
Query: 187 FQKCLEVGM 195
FQKCL +GM
Sbjct: 71 FQKCLALGM 79
>gi|149020213|gb|EDL78202.1| nuclear receptor subfamily 4, group A, member 3, isoform CRA_b
[Rattus norvegicus]
Length = 430
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 291 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 350
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 351 FQKCLSVGMVKEV 363
>gi|75017953|sp|Q8T5C6.1|RXR_BIOGL RecName: Full=Retinoic acid receptor RXR; AltName: Full=RXR-like
protein; AltName: Full=Retinoid X receptor; Short=BgRXR
gi|19386469|gb|AAL86461.1| RXR-like protein [Biomphalaria glabrata]
Length = 436
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 53/79 (67%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C +++C IDK QR RC +CR+
Sbjct: 116 ICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDDKNCMIDKRQRNRCQYCRYM 175
Query: 189 KCLEVGMKLEVSSQSTHGV 207
KCL +GMK E + V
Sbjct: 176 KCLSMGMKREAVQEERQRV 194
>gi|402896849|ref|XP_003911496.1| PREDICTED: nuclear receptor subfamily 4 group A member 3 isoform 2
[Papio anubis]
Length = 637
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 300 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 359
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 360 FQKCLSVGMVKEV 372
>gi|297270521|ref|XP_002800077.1| PREDICTED: nuclear receptor subfamily 4 group A member 3 isoform 2
[Macaca mulatta]
gi|297270525|ref|XP_002800078.1| PREDICTED: nuclear receptor subfamily 4 group A member 3 isoform 3
[Macaca mulatta]
Length = 626
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 289 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 348
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 349 FQKCLSVGMVKEV 361
>gi|410926021|ref|XP_003976477.1| PREDICTED: retinoic acid receptor RXR-beta-A-like isoform 1
[Takifugu rubripes]
Length = 417
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 90 KRLCCICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCTVDKRQRNRCQYCR 149
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 150 YQKCLAMGMKRE 161
>gi|212645753|ref|NP_001129836.1| Protein NHR-6, isoform b [Caenorhabditis elegans]
gi|186929576|emb|CAQ48391.1| Protein NHR-6, isoform b [Caenorhabditis elegans]
Length = 483
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 52/79 (65%)
Query: 121 DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK 180
+T +++C VC D+ HYG TCE CKGFFKRTVQ YTC ++C IDK R
Sbjct: 123 ETALDADKMCAVCNDRAVCLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPIDKRYRS 182
Query: 181 RCPFCRFQKCLEVGMKLEV 199
RC +CR+QKCLEVGM E+
Sbjct: 183 RCQYCRYQKCLEVGMVKEI 201
>gi|402896847|ref|XP_003911495.1| PREDICTED: nuclear receptor subfamily 4 group A member 3 isoform 1
[Papio anubis]
Length = 626
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 289 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 348
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 349 FQKCLSVGMVKEV 361
>gi|297684971|ref|XP_002820080.1| PREDICTED: nuclear receptor subfamily 4 group A member 3 isoform 3
[Pongo abelii]
Length = 626
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 289 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 348
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 349 FQKCLSVGMVKEV 361
>gi|410042950|ref|XP_003951532.1| PREDICTED: nuclear receptor subfamily 4 group A member 3 isoform 1
[Pan troglodytes]
Length = 626
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 289 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 348
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 349 FQKCLSVGMVKEV 361
>gi|148362145|gb|ABQ59669.1| RXRB [Salmo salar]
Length = 428
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 87 KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCR 146
Query: 187 FQKCLEVGMKLE 198
+QKCL GMK E
Sbjct: 147 YQKCLACGMKRE 158
>gi|27894361|ref|NP_775292.1| nuclear receptor subfamily 4 group A member 3 isoform b [Homo
sapiens]
gi|119579319|gb|EAW58915.1| nuclear receptor subfamily 4, group A, member 3, isoform CRA_a
[Homo sapiens]
Length = 637
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 300 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 359
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 360 FQKCLSVGMVKEV 372
>gi|27894355|ref|NP_008912.2| nuclear receptor subfamily 4 group A member 3 isoform a [Homo
sapiens]
gi|90110039|sp|Q92570.3|NR4A3_HUMAN RecName: Full=Nuclear receptor subfamily 4 group A member 3;
AltName: Full=Mitogen-induced nuclear orphan receptor;
AltName: Full=Neuron-derived orphan receptor 1; AltName:
Full=Nuclear hormone receptor NOR-1
gi|60814310|gb|AAX36295.1| nuclear receptor subfamily 4 group A member 3 [synthetic construct]
gi|119579321|gb|EAW58917.1| nuclear receptor subfamily 4, group A, member 3, isoform CRA_c
[Homo sapiens]
gi|119579322|gb|EAW58918.1| nuclear receptor subfamily 4, group A, member 3, isoform CRA_c
[Homo sapiens]
Length = 626
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 289 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 348
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 349 FQKCLSVGMVKEV 361
>gi|332832466|ref|XP_520150.3| PREDICTED: nuclear receptor subfamily 4 group A member 3 isoform 2
[Pan troglodytes]
Length = 637
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 300 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 359
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 360 FQKCLSVGMVKEV 372
>gi|1651191|dbj|BAA11419.1| neuron derived orphan receptor [Homo sapiens]
Length = 626
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 289 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 348
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 349 FQKCLSVGMVKEV 361
>gi|449493888|ref|XP_002193091.2| PREDICTED: nuclear receptor subfamily 4 group A member 3
[Taeniopygia guttata]
Length = 610
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 50/70 (71%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CRFQK
Sbjct: 271 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQK 330
Query: 190 CLEVGMKLEV 199
CL VGM EV
Sbjct: 331 CLSVGMVKEV 340
>gi|118343916|ref|NP_001071780.1| nuclear receptor [Ciona intestinalis]
gi|70570410|dbj|BAE06595.1| nuclear receptor [Ciona intestinalis]
Length = 656
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 119 HPDTKEGI-----EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCH 173
HP +G E C VCGDK HYG+L CE CKGFFKR+VQ Y C+ +C
Sbjct: 470 HPSVSQGTYGGFGEGSCAVCGDKARWQHYGVLACEGCKGFFKRSVQKDARYVCLGNSNCP 529
Query: 174 IDKTQRKRCPFCRFQKCLEVGMKLEVSSQSTH 205
IDK R CP+CR+QKCL VGM V H
Sbjct: 530 IDKKTRTHCPYCRYQKCLRVGMIKNVVRTDPH 561
>gi|1065886|emb|CAA59993.1| neuron-derived orphan receptor [Rattus norvegicus]
gi|1583604|prf||2121281A NOR-2 protein
Length = 430
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 291 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 350
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 351 FQKCLSVGMVKEV 363
>gi|168275838|dbj|BAG10639.1| orphan nuclear receptor NR4A3 [synthetic construct]
Length = 626
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 289 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 348
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 349 FQKCLSVGMVKEV 361
>gi|348504636|ref|XP_003439867.1| PREDICTED: retinoic acid receptor RXR-gamma-B-like isoform 2
[Oreochromis niloticus]
Length = 407
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 51/71 (71%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 82 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECPIDKRQRNRCQYCRYQ 141
Query: 189 KCLEVGMKLEV 199
KCL +GMK E
Sbjct: 142 KCLAMGMKREA 152
>gi|93003052|tpd|FAA00109.1| TPA: nuclear receptor [Ciona intestinalis]
Length = 656
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 119 HPDTKEGI-----EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCH 173
HP +G E C VCGDK HYG+L CE CKGFFKR+VQ Y C+ +C
Sbjct: 470 HPSVSQGTYGGFGEGSCAVCGDKARWQHYGVLACEGCKGFFKRSVQKDARYVCLGNSNCP 529
Query: 174 IDKTQRKRCPFCRFQKCLEVGMKLEVSSQSTH 205
IDK R CP+CR+QKCL VGM V H
Sbjct: 530 IDKKTRTHCPYCRYQKCLRVGMIKNVVRTDPH 561
>gi|10197969|gb|AAG15119.1| nuclear receptor NHR-6 [Caenorhabditis elegans]
Length = 469
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 52/79 (65%)
Query: 121 DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK 180
+T +++C VC D+ HYG TCE CKGFFKRTVQ YTC ++C IDK R
Sbjct: 109 ETALDADKMCAVCNDRAVCLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPIDKRYRS 168
Query: 181 RCPFCRFQKCLEVGMKLEV 199
RC +CR+QKCLEVGM E+
Sbjct: 169 RCQYCRYQKCLEVGMVKEI 187
>gi|444518684|gb|ELV12319.1| Nuclear receptor subfamily 4 group A member 3 [Tupaia chinensis]
Length = 641
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 304 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 363
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 364 FQKCLSVGMVKEV 376
>gi|17552670|ref|NP_497731.1| Protein NHR-6, isoform a [Caenorhabditis elegans]
gi|14917017|sp|P41829.3|NHR6_CAEEL RecName: Full=Nuclear hormone receptor family member nhr-6;
AltName: Full=Nuclear receptor subfamily 4 group A
member 5; AltName: Full=Steroid hormone receptor family
member cnr8
gi|4139074|gb|AAD03682.1| nuclear receptor NHR-6 [Caenorhabditis elegans]
gi|6434260|emb|CAA85271.2| Protein NHR-6, isoform a [Caenorhabditis elegans]
gi|28396016|gb|AAO39171.1| nuclear receptor NHR-6 [Caenorhabditis elegans]
Length = 619
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 52/79 (65%)
Query: 121 DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK 180
+T +++C VC D+ HYG TCE CKGFFKRTVQ YTC ++C IDK R
Sbjct: 259 ETALDADKMCAVCNDRAVCLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPIDKRYRS 318
Query: 181 RCPFCRFQKCLEVGMKLEV 199
RC +CR+QKCLEVGM E+
Sbjct: 319 RCQYCRYQKCLEVGMVKEI 337
>gi|432094623|gb|ELK26129.1| Retinoic acid receptor RXR-beta [Myotis davidii]
Length = 574
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRT++ Y+C + C +DK QR RC +CR
Sbjct: 243 KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCR 302
Query: 187 FQKCLEVGMKLEV 199
+QKCL GMK E
Sbjct: 303 YQKCLATGMKREA 315
>gi|146400035|gb|ABQ28715.1| RXR receptor [Brugia malayi]
Length = 465
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ +Y C R+C IDK QR RC +CR++
Sbjct: 131 ICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLIYLCRENRNCIIDKRQRNRCQYCRYR 190
Query: 189 KCLEVGMKLE 198
KC +GMK E
Sbjct: 191 KCQSMGMKRE 200
>gi|351699362|gb|EHB02281.1| Nuclear receptor subfamily 4 group A member 3, partial
[Heterocephalus glaber]
Length = 570
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 233 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 292
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 293 FQKCLSVGMVKEV 305
>gi|355707918|gb|AES03106.1| nuclear receptor subfamily 4, group A, member 2 [Mustela putorius
furo]
Length = 334
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 50/73 (68%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC FCR
Sbjct: 1 EGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCR 60
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 61 FQKCLAVGMVKEV 73
>gi|440905024|gb|ELR55472.1| Nuclear receptor subfamily 4 group A member 3 [Bos grunniens mutus]
Length = 546
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 209 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 268
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 269 FQKCLSVGMVKEV 281
>gi|355567588|gb|EHH23929.1| Nuclear hormone receptor NOR-1 [Macaca mulatta]
Length = 524
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 187 EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 246
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 247 FQKCLSVGMVKEV 259
>gi|47940249|gb|AAH72132.1| Rxrb protein [Xenopus laevis]
Length = 449
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 51/72 (70%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRT++ YTC + C +DK QR RC +CR
Sbjct: 125 KRLCAICGDRSSGKHYGVHSCEGCKGFFKRTIRKDLTYTCRDSKDCIVDKRQRNRCQYCR 184
Query: 187 FQKCLEVGMKLE 198
+QKCL GMK E
Sbjct: 185 YQKCLATGMKRE 196
>gi|184186086|ref|NP_001116968.1| orphan steroid hormone receptor 2 [Strongylocentrotus purpuratus]
gi|68566021|sp|Q26622.1|SHR2_STRPU RecName: Full=Orphan steroid hormone receptor 2; AltName:
Full=SpSHR2
gi|1054912|gb|AAB19174.1| orphan steroid hormone receptor 2 [Strongylocentrotus purpuratus]
gi|167859078|gb|ACA04474.1| Shr2 [Strongylocentrotus purpuratus]
Length = 583
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 49/69 (71%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
ELC VCGDK SG HYG ++CE CKGFFKR+++ YTC + C I K R RC +CR
Sbjct: 85 ELCAVCGDKASGRHYGAISCEGCKGFFKRSIRKHLGYTCRGNKDCQIIKHNRNRCQYCRL 144
Query: 188 QKCLEVGMK 196
QKCL++GMK
Sbjct: 145 QKCLDMGMK 153
>gi|190336859|gb|AAI62302.1| Retinoid x receptor, beta b [Danio rerio]
gi|190337908|gb|AAI62301.1| Retinoid x receptor, beta b [Danio rerio]
Length = 422
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ +C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 87 KRMCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECLVDKRQRNRCQYCR 146
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 147 YQKCLAMGMKRE 158
>gi|19919404|gb|AAM08268.1|AF438229_1 nuclear receptor RXR [Dirofilaria immitis]
gi|19919406|gb|AAM08269.1|AF438230_1 nuclear receptor RXR [Dirofilaria immitis]
Length = 474
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ +Y C R+C IDK QR RC +CR++
Sbjct: 128 ICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLIYLCRENRNCIIDKRQRNRCQYCRYR 187
Query: 189 KCLEVGMKLE 198
KC +GMK E
Sbjct: 188 KCQSMGMKRE 197
>gi|391328030|ref|XP_003738496.1| PREDICTED: ecdysone receptor-like [Metaseiulus occidentalis]
Length = 497
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 66/112 (58%), Gaps = 10/112 (8%)
Query: 87 QSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLT 146
+SP G ST + S G++ P ST +P ++ ELC VCGD+ SGYHY LT
Sbjct: 57 KSPSGESTTLT-SQTGLAPSPISNST------NPRQQQ---ELCLVCGDRASGYHYNALT 106
Query: 147 CESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
CE CKGFF+R++ VYTC C ID R++C CR +KCL VGM+ E
Sbjct: 107 CEGCKGFFRRSITKNAVYTCKYGNVCEIDMYMRRKCQECRLKKCLMVGMRSE 158
>gi|409194682|gb|AFV31631.1| retinoid X receptor alpha, partial [Acanthopagrus schlegelii]
Length = 196
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 129 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQ 188
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR+Q
Sbjct: 3 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQ 62
Query: 189 KCLEVGMKLE 198
KCL +GMK E
Sbjct: 63 KCLAMGMKRE 72
>gi|538373|gb|AAA96984.1| steroid hormone receptor family member CNR8 [Caenorhabditis
elegans]
Length = 463
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 52/79 (65%)
Query: 121 DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK 180
+T +++C VC D+ HYG TCE CKGFFKRTVQ YTC ++C IDK R
Sbjct: 103 ETALDADKMCAVCNDRAVCLHYGARTCEGCKGFFKRTVQKNSKYTCAGNKTCPIDKRYRS 162
Query: 181 RCPFCRFQKCLEVGMKLEV 199
RC +CR+QKCLEVGM E+
Sbjct: 163 RCQYCRYQKCLEVGMVKEI 181
>gi|170589617|ref|XP_001899570.1| nuclear hormone receptor [Brugia malayi]
gi|158593783|gb|EDP32378.1| nuclear hormone receptor, putative [Brugia malayi]
Length = 555
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 119 HPDTK-EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
+PD+ + LC VCGDK SG+HYG+ CE CKGFF+R++Q + Y C+ + CHI +
Sbjct: 150 YPDSSTDNKPALCKVCGDKSSGFHYGVTACEGCKGFFRRSIQKQMEYRCLRDGKCHIHRL 209
Query: 178 QRKRCPFCRFQKCLEVGM 195
R RC FCRF+KCL VGM
Sbjct: 210 NRNRCQFCRFRKCLAVGM 227
>gi|18859343|ref|NP_571313.1| retinoic acid receptor RXR-beta-B [Danio rerio]
gi|52783418|sp|Q90417.1|RXRBB_DANRE RecName: Full=Retinoic acid receptor RXR-beta-B; AltName:
Full=Nuclear receptor subfamily 2 group B member 2-B;
AltName: Full=Retinoic acid receptor RXR-delta; AltName:
Full=Retinoid X receptor beta-B; AltName: Full=Retinoid
X receptor delta
gi|1046297|gb|AAC59721.1| retinoid X receptor delta [Danio rerio]
gi|1583306|prf||2120366A retinoid X receptor:ISOTYPE=delta
Length = 422
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ +C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 87 KRMCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECLVDKRQRNRCQYCR 146
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 147 YQKCLAMGMKRE 158
>gi|482930|emb|CAA54097.1| EAR2 [Mus musculus]
Length = 390
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 11/122 (9%)
Query: 86 FQSPGGGSTNMDLSSAGISYHPFHTSTIAATP------EHPDTKE--GIEELCPVCGDKV 137
+ PGG + +D AG SY P T +A+P P +E G++ C VCGDK
Sbjct: 8 WGDPGGDTNGVD--KAGGSY-PRATEDDSASPPGATSDAEPGDEERPGLQVDCVVCGDKS 64
Query: 138 SGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKL 197
SG HYG+ TCE CK FFKRT++ YTC + R C ID+ R +C +CR +KC VGM+
Sbjct: 65 SGKHYGVFTCEGCKSFFKRTIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRK 124
Query: 198 EV 199
E
Sbjct: 125 EA 126
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.129 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,611,000,572
Number of Sequences: 23463169
Number of extensions: 146298849
Number of successful extensions: 438883
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7575
Number of HSP's successfully gapped in prelim test: 276
Number of HSP's that attempted gapping in prelim test: 428578
Number of HSP's gapped (non-prelim): 8330
length of query: 222
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 85
effective length of database: 9,144,741,214
effective search space: 777303003190
effective search space used: 777303003190
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)