Your job contains 1 sequence.
>psy12688
MAYMSQIHENILDLVQRCKKRKKLKPKTPIQQLLSAATGAQTPQMQHSNNDTQSSQLSPM
LGNNTSASAGGAGYNFNNMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHP
DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK
RCPFCRFQKCLEVGMKLEVSSQSTHGVVVIWSPHSPSISENL
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12688
(222 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0001078 - symbol:ftz-f1 "ftz transcription factor ... 422 1.3e-39 2
UNIPROTKB|F1NVB5 - symbol:NR5A2 "Nuclear receptor subfami... 368 7.4e-34 1
UNIPROTKB|O42101 - symbol:NR5A2 "Nuclear receptor subfami... 368 7.4e-34 1
UNIPROTKB|F1PXN4 - symbol:NR5A2 "Uncharacterized protein"... 368 7.4e-34 1
UNIPROTKB|B4E2P3 - symbol:NR5A2 "cDNA FLJ52395, highly si... 368 7.4e-34 1
UNIPROTKB|F1MCM4 - symbol:NR5A2 "Uncharacterized protein"... 368 9.4e-34 1
UNIPROTKB|O00482 - symbol:NR5A2 "Nuclear receptor subfami... 368 9.4e-34 1
ZFIN|ZDB-GENE-990415-79 - symbol:nr5a2 "nuclear receptor ... 365 1.5e-33 1
UNIPROTKB|H0Y328 - symbol:NR5A2 "Nuclear receptor subfami... 364 2.0e-33 1
UNIPROTKB|Q04752 - symbol:NR5A1 "Steroidogenic factor 1" ... 363 2.5e-33 1
UNIPROTKB|Q13285 - symbol:NR5A1 "Steroidogenic factor 1" ... 363 2.5e-33 1
UNIPROTKB|Q5T6F6 - symbol:NR5A1 "Steroidogenic factor 1" ... 363 2.5e-33 1
UNIPROTKB|P79387 - symbol:NR5A1 "Steroidogenic factor 1" ... 363 2.5e-33 1
MGI|MGI:1346833 - symbol:Nr5a1 "nuclear receptor subfamil... 363 2.5e-33 1
RGD|68350 - symbol:Nr5a1 "nuclear receptor subfamily 5, g... 363 2.5e-33 1
UNIPROTKB|F1LQ71 - symbol:Nr5a1 "Steroidogenic factor 1" ... 363 2.5e-33 1
MGI|MGI:1346834 - symbol:Nr5a2 "nuclear receptor subfamil... 365 3.0e-33 1
RGD|68353 - symbol:Nr5a2 "nuclear receptor subfamily 5, g... 365 3.0e-33 1
ZFIN|ZDB-GENE-010504-1 - symbol:nr5a1a "nuclear receptor ... 362 3.2e-33 1
ZFIN|ZDB-GENE-040702-6 - symbol:nr5a1b "nuclear receptor ... 357 1.1e-32 1
WB|WBGene00003623 - symbol:nhr-25 species:6239 "Caenorhab... 340 2.3e-30 1
UNIPROTKB|Q19345 - symbol:nhr-25 "Nuclear hormone recepto... 340 2.3e-30 1
ZFIN|ZDB-GENE-030131-4652 - symbol:nr5a5 "nuclear recepto... 321 2.2e-28 1
FB|FBgn0261239 - symbol:Hr39 "Hormone receptor-like in 39... 302 8.8e-26 1
FB|FBgn0264562 - symbol:Hr4 "Hr4" species:7227 "Drosophil... 283 1.1e-24 2
UNIPROTKB|E9PBQ4 - symbol:NR4A2 "Nuclear receptor subfami... 259 2.7e-24 2
UNIPROTKB|P28701 - symbol:RXRG "Retinoic acid receptor RX... 265 4.4e-24 2
UNIPROTKB|F1NSP3 - symbol:RXRG "Retinoic acid receptor RX... 260 6.4e-24 2
ZFIN|ZDB-GENE-070824-4 - symbol:nr4a3 "nuclear receptor s... 266 1.6e-23 2
UNIPROTKB|C9J8W4 - symbol:NR4A2 "Nuclear receptor subfami... 259 3.1e-23 2
UNIPROTKB|Q3LZI9 - symbol:Nr4a2 "Nuclear receptor subfami... 259 3.5e-23 2
UNIPROTKB|E2RRN7 - symbol:NR4A2 "Uncharacterized protein"... 259 3.9e-23 2
UNIPROTKB|F1MWQ3 - symbol:RARA "Uncharacterized protein" ... 253 4.7e-23 2
UNIPROTKB|F1PN49 - symbol:RARA "Retinoic acid receptor al... 253 4.7e-23 2
UNIPROTKB|Q5FBR4 - symbol:RARA "Retinoic acid receptor al... 253 4.7e-23 2
UNIPROTKB|P10276 - symbol:RARA "Retinoic acid receptor al... 253 4.7e-23 2
UNIPROTKB|F1RXC9 - symbol:RARA "Uncharacterized protein" ... 253 4.7e-23 2
UNIPROTKB|G3V956 - symbol:Rara "Protein Rara" species:101... 253 4.7e-23 2
UNIPROTKB|Q6NXU0 - symbol:NR4A2 "Nuclear receptor subfami... 259 5.4e-23 2
UNIPROTKB|P22736 - symbol:NR4A1 "Nuclear receptor subfami... 273 5.9e-23 1
UNIPROTKB|F8W6I3 - symbol:NR4A2 "Nuclear receptor subfami... 259 6.5e-23 2
UNIPROTKB|F5GXF0 - symbol:NR4A1 "Nuclear receptor subfami... 273 7.3e-23 1
UNIPROTKB|E2R2V0 - symbol:RARA "Uncharacterized protein" ... 252 8.8e-23 2
UNIPROTKB|Q08E53 - symbol:NR4A2 "Nuclear receptor subfami... 259 9.6e-23 2
UNIPROTKB|P43354 - symbol:NR4A2 "Nuclear receptor subfami... 259 9.6e-23 2
UNIPROTKB|F1RPU1 - symbol:NR4A2 "Uncharacterized protein"... 259 9.6e-23 2
UNIPROTKB|Q5R5Y4 - symbol:NR4A2 "Nuclear receptor subfami... 259 9.6e-23 2
MGI|MGI:1352456 - symbol:Nr4a2 "nuclear receptor subfamil... 259 9.6e-23 2
RGD|3202 - symbol:Nr4a2 "nuclear receptor subfamily 4, gr... 259 9.6e-23 2
RGD|620029 - symbol:Nr4a1 "nuclear receptor subfamily 4, ... 271 9.7e-23 1
FB|FBgn0003964 - symbol:usp "ultraspiracle" species:7227 ... 269 9.9e-23 1
MGI|MGI:97856 - symbol:Rara "retinoic acid receptor, alph... 250 1.0e-22 2
UNIPROTKB|E2RBX8 - symbol:NR4A2 "Uncharacterized protein"... 259 1.0e-22 2
UNIPROTKB|F5H4G9 - symbol:NR4A2 "Nuclear receptor subfami... 259 1.0e-22 2
UNIPROTKB|O97727 - symbol:NOR-1 "Uncharacterized protein"... 265 1.6e-22 1
UNIPROTKB|B3KY83 - symbol:RXRA "cDNA FLJ16020 fis, clone ... 261 1.6e-22 1
MGI|MGI:1352454 - symbol:Nr4a1 "nuclear receptor subfamil... 269 1.6e-22 1
FB|FBgn0014859 - symbol:Hr38 "Hormone receptor-like in 38... 260 1.9e-22 2
UNIPROTKB|F1NH64 - symbol:RXRA "Uncharacterized protein" ... 264 2.1e-22 1
UNIPROTKB|P19793 - symbol:RXRA "Retinoic acid receptor RX... 264 2.4e-22 1
RGD|3610 - symbol:Rxra "retinoid X receptor alpha" specie... 264 2.6e-22 1
UNIPROTKB|Q0VJ96 - symbol:Rxra "Retinoic acid receptor RX... 264 2.6e-22 1
UNIPROTKB|Q0VC20 - symbol:RXRG "Retinoic acid receptor RX... 263 3.2e-22 1
UNIPROTKB|P48443 - symbol:RXRG "Retinoic acid receptor RX... 263 3.2e-22 1
UNIPROTKB|Q0GFF6 - symbol:RXRG "Retinoic acid receptor RX... 263 3.2e-22 1
MGI|MGI:98216 - symbol:Rxrg "retinoid X receptor gamma" s... 263 3.2e-22 1
RGD|620046 - symbol:Rxrg "retinoid X receptor gamma" spec... 263 3.2e-22 1
ZFIN|ZDB-GENE-040718-103 - symbol:nr4a2b "nuclear recepto... 266 3.2e-22 1
UNIPROTKB|F1MX52 - symbol:RXRA "Uncharacterized protein" ... 263 3.5e-22 1
UNIPROTKB|F1P6M9 - symbol:RXRA "Uncharacterized protein" ... 263 3.9e-22 1
ZFIN|ZDB-GENE-980526-72 - symbol:rarab "retinoic acid rec... 262 4.0e-22 1
MGI|MGI:98214 - symbol:Rxra "retinoid X receptor alpha" s... 262 4.2e-22 1
UNIPROTKB|O97726 - symbol:NOR-1 "Uncharacterized protein"... 265 5.2e-22 1
WB|WBGene00003681 - symbol:nhr-91 species:6239 "Caenorhab... 261 5.8e-22 1
UNIPROTKB|Q9U2R6 - symbol:nhr-91 "Nuclear hormone recepto... 261 5.8e-22 1
UNIPROTKB|A8MUP8 - symbol:RARA "Retinoic acid receptor al... 261 6.0e-22 1
RGD|621685 - symbol:Nr2f6 "nuclear receptor subfamily 2, ... 256 6.9e-22 1
UNIPROTKB|O09017 - symbol:Nr2f6 "Nuclear receptor subfami... 256 6.9e-22 1
MGI|MGI:104740 - symbol:Ppara "peroxisome proliferator ac... 260 7.1e-22 1
ZFIN|ZDB-GENE-980526-284 - symbol:raraa "retinoic acid re... 259 7.3e-22 1
UNIPROTKB|Q0V8F0 - symbol:NR4A1 "Nuclear receptor subfami... 262 9.2e-22 1
UNIPROTKB|K9J6P0 - symbol:K9J6P0 "Uncharacterized protein... 261 1.0e-21 1
UNIPROTKB|B7Z3E4 - symbol:RXRB "Retinoic acid receptor RX... 253 1.1e-21 1
RGD|3534 - symbol:Rara "retinoic acid receptor, alpha" sp... 253 1.1e-21 1
UNIPROTKB|P51666 - symbol:NR4A1 "Nuclear receptor subfami... 261 1.2e-21 1
ZFIN|ZDB-GENE-980526-36 - symbol:rxrga "retinoid x recept... 257 1.2e-21 1
MGI|MGI:1352457 - symbol:Nr4a3 "nuclear receptor subfamil... 261 1.3e-21 1
RGD|61882 - symbol:Nr4a3 "nuclear receptor subfamily 4, g... 261 1.3e-21 1
UNIPROTKB|P51179 - symbol:Nr4a3 "Nuclear receptor subfami... 261 1.3e-21 1
ZFIN|ZDB-GENE-040724-202 - symbol:nr6a1b "nuclear recepto... 257 1.4e-21 1
UNIPROTKB|P51128 - symbol:rxra "Retinoic acid receptor RX... 258 1.4e-21 1
UNIPROTKB|K7GQM0 - symbol:RXRB "Uncharacterized protein" ... 253 1.5e-21 1
UNIPROTKB|F8VZR5 - symbol:RXRB "Retinoic acid receptor RX... 253 1.6e-21 1
ZFIN|ZDB-GENE-990415-243 - symbol:rxrab "retinoid x recep... 252 1.6e-21 1
UNIPROTKB|F8VNP5 - symbol:RXRB "Retinoic acid receptor RX... 253 1.7e-21 1
UNIPROTKB|Q92570 - symbol:NR4A3 "Nuclear receptor subfami... 260 1.7e-21 1
WB|WBGene00003678 - symbol:nhr-88 species:6239 "Caenorhab... 232 1.7e-21 2
UNIPROTKB|E1B7S6 - symbol:NR4A3 "Uncharacterized protein"... 260 1.8e-21 1
ZFIN|ZDB-GENE-040616-3 - symbol:esrrd "estrogen-related r... 255 1.8e-21 1
ZFIN|ZDB-GENE-040704-11 - symbol:nr4a1 "nuclear receptor ... 259 1.8e-21 1
WARNING: Descriptions of 812 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0001078 [details] [associations]
symbol:ftz-f1 "ftz transcription factor 1" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS;NAS;IDA] [GO:0003677 "DNA binding" evidence=NAS;IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0007365 "periodic partitioning" evidence=IMP] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0035071 "salivary gland
cell autophagic cell death" evidence=NAS] [GO:0035075 "response to
ecdysone" evidence=TAS] [GO:0009725 "response to hormone stimulus"
evidence=TAS] [GO:0008219 "cell death" evidence=TAS] [GO:0040034
"regulation of development, heterochronic" evidence=TAS]
[GO:0007552 "metamorphosis" evidence=IMP;TAS] [GO:0003712
"transcription cofactor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0002165 "instar larval or
pupal development" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0042048 "olfactory behavior"
evidence=IMP] [GO:0035074 "pupation" evidence=IMP] [GO:0007480
"imaginal disc-derived leg morphogenesis" evidence=IMP] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0035626 "juvenile hormone mediated signaling
pathway" evidence=IMP] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005737 EMBL:AE014296
GO:GO:0046872 GO:GO:0008219 GO:GO:0004879 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0001077 GO:GO:0042048 GO:GO:0040034 GO:GO:0000976
GO:GO:0007480 GO:GO:0035074 GO:GO:0035626 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 KO:K08705 EMBL:M63711 EMBL:M98397
EMBL:BT058016 EMBL:AY051845 PIR:A47303 PIR:T13733
RefSeq:NP_001246824.1 RefSeq:NP_524143.2 RefSeq:NP_730359.1
UniGene:Dm.995 PDB:2XHS PDBsum:2XHS ProteinModelPortal:P33244
SMR:P33244 IntAct:P33244 MINT:MINT-156933 STRING:P33244
PaxDb:P33244 EnsemblMetazoa:FBtr0075086 GeneID:40045
KEGG:dme:Dmel_CG4059 CTD:40045 FlyBase:FBgn0001078
InParanoid:P33244 OMA:SKHCAGS OrthoDB:EOG4QZ61Z PhylomeDB:P33244
GenomeRNAi:40045 NextBio:816714 Bgee:P33244 GermOnline:CG4059
GO:GO:0007365 GO:GO:0035075 Uniprot:P33244
Length = 1027
Score = 422 (153.6 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 84/116 (72%), Positives = 88/116 (75%)
Query: 88 SPGGGSTNMDLSSAGISYHPFHT-STIAATPEHP----DTKEGIEELCPVCGDKVSGYHY 142
S G GS AG + P + +ATP H D K EELCPVCGDKVSGYHY
Sbjct: 461 SVGNGSGGAGNGGAGGNSGPGNPMGGTSATPGHGGEVIDFKHLFEELCPVCGDKVSGYHY 520
Query: 143 GLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
GLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP+CRFQKCLEVGMKLE
Sbjct: 521 GLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLE 576
Score = 38 (18.4 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 13/56 (23%), Positives = 22/56 (39%)
Query: 33 LLSAATGAQTPQMQHSNNDTQSSQLSPMLGNNTXXXXXXXXYNFNNMVDNSYLFQS 88
L+ AT A T ++NN+ ++ NN N N+++ S S
Sbjct: 142 LMGTATAATTTTTNNNNNNNTNNN-----NNNNVEAKTVRPSNGNSVIIESVTMPS 192
Score = 36 (17.7 bits), Expect = 2.1e-39, Sum P(2) = 2.1e-39
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 44 QMQHSNNDTQSSQL 57
Q QHS+ Q QL
Sbjct: 33 QQQHSHQQQQQQQL 46
>UNIPROTKB|F1NVB5 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9031 "Gallus gallus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008206
"bile acid metabolic process" evidence=IEA] [GO:0042127 "regulation
of cell proliferation" evidence=IEA] [GO:0042632 "cholesterol
homeostasis" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0045070 "positive regulation
of viral genome replication" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0008206 GO:GO:0005543
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0042632 GO:GO:0042127
GO:GO:0044212 GO:GO:0045070 GeneTree:ENSGT00670000097927
InterPro:IPR016355 PIRSF:PIRSF002530 IPI:IPI00679374 OMA:NTFGLMC
EMBL:AADN02033799 EMBL:AADN02033800 EMBL:AADN02033801
EMBL:AADN02033802 EMBL:AADN02033803 Ensembl:ENSGALT00000003418
ArrayExpress:F1NVB5 Uniprot:F1NVB5
Length = 501
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>UNIPROTKB|O42101 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG240365 InterPro:IPR016355 PIRSF:PIRSF002530 EMBL:AB002403
IPI:IPI00679374 RefSeq:NP_990409.1 UniGene:Gga.572
ProteinModelPortal:O42101 SMR:O42101 STRING:O42101 GeneID:395961
KEGG:gga:395961 CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677
InParanoid:O42101 KO:K08027 OrthoDB:EOG470TH1 NextBio:20816026
Uniprot:O42101
Length = 501
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 40 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLSVGMKLE 114
>UNIPROTKB|F1PXN4 [details] [associations]
symbol:NR5A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
OMA:NTFGLMC EMBL:AAEX03005037 Ensembl:ENSCAFT00000017785
Uniprot:F1PXN4
Length = 519
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 58 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 117
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 118 YCRFQKCLSVGMKLE 132
>UNIPROTKB|B4E2P3 [details] [associations]
symbol:NR5A2 "cDNA FLJ52395, highly similar to Orphan
nuclear receptor NR5A2" species:9606 "Homo sapiens" [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008206 "bile
acid metabolic process" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0042632 "cholesterol
homeostasis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008206
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0042632 GO:GO:0042127 GO:GO:0030522
InterPro:IPR016355 PIRSF:PIRSF002530 HOGENOM:HOG000063718
HOVERGEN:HBG106677 UniGene:Hs.33446 HGNC:HGNC:7984 EMBL:AC096633
EMBL:AK304365 EMBL:AK316513 IPI:IPI01009507 SMR:B4E2P3
STRING:B4E2P3 Ensembl:ENST00000544748 Uniprot:B4E2P3
Length = 469
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 8 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 67
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 68 YCRFQKCLSVGMKLE 82
>UNIPROTKB|F1MCM4 [details] [associations]
symbol:NR5A2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045070 "positive
regulation of viral genome replication" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0042632 "cholesterol homeostasis" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0008206 "bile
acid metabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005737 GO:GO:0008206
GO:GO:0005543 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0042632
GO:GO:0042127 GO:GO:0044212 GO:GO:0045070
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
CTD:2494 KO:K08027 OMA:NTFGLMC EMBL:DAAA02043946 EMBL:DAAA02043947
EMBL:DAAA02043948 EMBL:DAAA02043949 EMBL:DAAA02043950
EMBL:DAAA02043951 IPI:IPI01004030 RefSeq:NP_001193745.1
UniGene:Bt.107646 UniGene:Bt.10845 UniGene:Bt.97978
Ensembl:ENSBTAT00000012207 GeneID:541305 KEGG:bta:541305
NextBio:20879130 ArrayExpress:F1MCM4 Uniprot:F1MCM4
Length = 541
Score = 368 (134.6 bits), Expect = 9.4e-34, P = 9.4e-34
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>UNIPROTKB|O00482 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0008206 "bile acid metabolic process"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0009790 "embryo
development" evidence=TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0042592
"homeostatic process" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA;TAS] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0005543 "phospholipid binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0045070 "positive regulation of viral
genome replication" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0045893
GO:GO:0005654 GO:GO:0008206 GO:GO:0005543 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
EMBL:CH471067 GO:GO:0042632 GO:GO:0003705 GO:GO:0042127
GO:GO:0009790 GO:GO:0044212 GO:GO:0006367 GO:GO:0042592
GO:GO:0045070 PDB:3TX7 PDBsum:3TX7 eggNOG:NOG240365 PDB:1YOK
PDB:1ZDU PDB:3PLZ PDB:4DOS PDBsum:1YOK PDBsum:1ZDU PDBsum:3PLZ
PDBsum:4DOS InterPro:IPR016355 PIRSF:PIRSF002530 PDB:1YUC PDB:4DOR
PDBsum:1YUC PDBsum:4DOR CTD:2494 HOGENOM:HOG000063718
HOVERGEN:HBG106677 KO:K08027 OrthoDB:EOG470TH1 EMBL:U80251
EMBL:AF146343 EMBL:AF124247 EMBL:AF190464 EMBL:BC118571
EMBL:BC118652 EMBL:U93553 IPI:IPI00011769 IPI:IPI00217284
IPI:IPI00217285 RefSeq:NP_003813.1 RefSeq:NP_995582.1
UniGene:Hs.33446 PDB:2A66 PDBsum:2A66 ProteinModelPortal:O00482
SMR:O00482 DIP:DIP-37952N IntAct:O00482 MINT:MINT-2997724
STRING:O00482 PhosphoSite:O00482 PRIDE:O00482
Ensembl:ENST00000236914 Ensembl:ENST00000367362 GeneID:2494
KEGG:hsa:2494 UCSC:uc001gvb.3 GeneCards:GC01P199996 HGNC:HGNC:7984
HPA:HPA005455 HPA:HPA017067 MIM:604453 neXtProt:NX_O00482
PharmGKB:PA31765 InParanoid:O00482 OMA:NTFGLMC PhylomeDB:O00482
BindingDB:O00482 ChEMBL:CHEMBL3544 EvolutionaryTrace:O00482
GenomeRNAi:2494 NextBio:9851 ArrayExpress:O00482 Bgee:O00482
CleanEx:HS_NR5A2 Genevestigator:O00482 GermOnline:ENSG00000116833
Uniprot:O00482
Length = 541
Score = 368 (134.6 bits), Expect = 9.4e-34, P = 9.4e-34
Identities = 63/75 (84%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP
Sbjct: 80 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 140 YCRFQKCLSVGMKLE 154
>ZFIN|ZDB-GENE-990415-79 [details] [associations]
symbol:nr5a2 "nuclear receptor subfamily 5, group A,
member 2" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;NAS;IDA] [GO:0051216 "cartilage development"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-79 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0051216
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 HSSP:P45448 EMBL:AL954148
EMBL:BC163522 EMBL:AY034061 IPI:IPI00511047 UniGene:Dr.6870
SMR:Q90YL6 STRING:Q90YL6 Ensembl:ENSDART00000127424
InParanoid:Q90YL6 Uniprot:Q90YL6
Length = 517
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++E+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ +SC IDKTQRKRCP
Sbjct: 40 EDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCP 99
Query: 184 FCRFQKCLEVGMKLE 198
+CRFQKCL VGMKLE
Sbjct: 100 YCRFQKCLTVGMKLE 114
>UNIPROTKB|H0Y328 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HGNC:HGNC:7984 EMBL:AC096633
ProteinModelPortal:H0Y328 PRIDE:H0Y328 Ensembl:ENST00000367357
Bgee:H0Y328 Uniprot:H0Y328
Length = 377
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 62/73 (84%), Positives = 67/73 (91%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC+ ++C IDKTQRKRCP+C
Sbjct: 3 LEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYC 62
Query: 186 RFQKCLEVGMKLE 198
RFQKCL VGMKLE
Sbjct: 63 RFQKCLSVGMKLE 75
>UNIPROTKB|Q04752 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=ISS;IMP] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003707 "steroid hormone receptor activity" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP;IDA]
[GO:2000195 "negative regulation of female gonad development"
evidence=IEA] [GO:2000020 "positive regulation of male gonad
development" evidence=IEA] [GO:0051457 "maintenance of protein
location in nucleus" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042445 "hormone metabolic process" evidence=IEA] [GO:0030325
"adrenal gland development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0010259 "multicellular organismal aging"
evidence=IEA] [GO:0009888 "tissue development" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001553 "luteinization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0030154 GO:GO:0030325
GO:GO:0005543 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003682 GO:GO:0003705 GO:GO:0008584
GO:GO:0051457 GO:GO:0001553 GO:GO:0009888 GO:GO:2000195
eggNOG:NOG240365 GeneTree:ENSGT00670000097927 InterPro:IPR016355
PIRSF:PIRSF002530 HOGENOM:HOG000063718 HOVERGEN:HBG106677
EMBL:D13569 EMBL:S45997 IPI:IPI00707901 PIR:A46077
RefSeq:NP_776828.1 UniGene:Bt.7422 ProteinModelPortal:Q04752
SMR:Q04752 IntAct:Q04752 STRING:Q04752 Ensembl:ENSBTAT00000011869
GeneID:281948 KEGG:bta:281948 CTD:2516 InParanoid:Q04752 KO:K08560
OMA:PFGLMCK OrthoDB:EOG4FJ891 NextBio:20805824 Uniprot:Q04752
Length = 461
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>UNIPROTKB|Q13285 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001553 "luteinization" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0009888 "tissue development" evidence=IEA] [GO:0010259
"multicellular organismal aging" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030325 "adrenal gland
development" evidence=IEA] [GO:0042445 "hormone metabolic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IEA] [GO:2000195 "negative regulation of female
gonad development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005543 "phospholipid binding"
evidence=IDA] [GO:0050810 "regulation of steroid biosynthetic
process" evidence=TAS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:2000020 "positive
regulation of male gonad development" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=TAS] [GO:0007267 "cell-cell
signaling" evidence=TAS] [GO:0007538 "primary sex determination"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005654 GO:GO:0030154 GO:GO:0030325
GO:GO:0050810 GO:GO:0005543 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:CH471090
GO:GO:0045944 GO:GO:0007267 GO:GO:0003682 GO:GO:0003705
GO:GO:0008584 GO:GO:0003713 GO:GO:0003690 GO:GO:0006367
GO:GO:0051457 Orphanet:243 Orphanet:619 GO:GO:0001553 Orphanet:242
GO:GO:2000020 GO:GO:0007538 Orphanet:168558 GO:GO:0009888
GO:GO:2000195 eggNOG:NOG240365 Orphanet:251510 EMBL:AL137846
PDB:1ZDT PDBsum:1ZDT InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 EMBL:AL354979
CleanEx:HS_SF1 CTD:2516 KO:K08560 OMA:PFGLMCK OrthoDB:EOG4FJ891
EMBL:U76388 EMBL:D88155 EMBL:BC032501 EMBL:U32592 IPI:IPI00012446
PIR:JC4972 RefSeq:NP_004950.2 UniGene:Hs.495108 PDB:1YOW
PDBsum:1YOW ProteinModelPortal:Q13285 SMR:Q13285 IntAct:Q13285
MINT:MINT-215481 STRING:Q13285 PhosphoSite:Q13285 DMDM:3121738
PRIDE:Q13285 DNASU:2516 Ensembl:ENST00000373588 GeneID:2516
KEGG:hsa:2516 UCSC:uc004boo.1 GeneCards:GC09M127243 HGNC:HGNC:7983
MIM:184757 MIM:612964 MIM:612965 MIM:613957 neXtProt:NX_Q13285
PharmGKB:PA31764 InParanoid:Q13285 PhylomeDB:Q13285
BindingDB:Q13285 ChEMBL:CHEMBL4666 EvolutionaryTrace:Q13285
GenomeRNAi:2516 NextBio:9909 ArrayExpress:Q13285 Bgee:Q13285
CleanEx:HS_NR5A1 Genevestigator:Q13285 GermOnline:ENSG00000136931
Uniprot:Q13285
Length = 461
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>UNIPROTKB|Q5T6F6 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001553 "luteinization" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0009888 "tissue development" evidence=IEA]
[GO:0010259 "multicellular organismal aging" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030325
"adrenal gland development" evidence=IEA] [GO:0042445 "hormone
metabolic process" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0051457 "maintenance of protein location in nucleus"
evidence=IEA] [GO:2000020 "positive regulation of male gonad
development" evidence=IEA] [GO:2000195 "negative regulation of
female gonad development" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0030154 GO:GO:0030325 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 GO:GO:0008584
GO:GO:0006366 GO:GO:0003690 GO:GO:0051457 GO:GO:0001553
GO:GO:0009888 GO:GO:2000195 EMBL:AL137846 EMBL:AL354979
UniGene:Hs.495108 HGNC:HGNC:7983 IPI:IPI00640780 SMR:Q5T6F6
Ensembl:ENST00000455734 HOGENOM:HOG000144632 Uniprot:Q5T6F6
Length = 178
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>UNIPROTKB|P79387 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9823 "Sus
scrofa" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0008289
eggNOG:NOG240365 EMBL:AP009124 InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 CTD:2516 KO:K08560
OrthoDB:EOG4FJ891 EMBL:U84399 RefSeq:NP_999344.1 UniGene:Ssc.82462
UniGene:Ssc.82473 ProteinModelPortal:P79387 SMR:P79387
STRING:P79387 GeneID:397368 KEGG:ssc:397368 Uniprot:P79387
Length = 461
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>MGI|MGI:1346833 [details] [associations]
symbol:Nr5a1 "nuclear receptor subfamily 5, group A, member
1" species:10090 "Mus musculus" [GO:0001553 "luteinization"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005543 "phospholipid binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008289 "lipid binding" evidence=IEA] [GO:0008584 "male gonad
development" evidence=IGI;IMP] [GO:0009888 "tissue development"
evidence=IMP] [GO:0010259 "multicellular organismal aging"
evidence=IMP] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0022414 "reproductive process" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IGI] [GO:0030325 "adrenal gland
development" evidence=IGI;IMP] [GO:0042445 "hormone metabolic
process" evidence=IMP] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IDA] [GO:2000020 "positive regulation of male
gonad development" evidence=ISO;IMP] [GO:2000195 "negative
regulation of female gonad development" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1346833 GO:GO:0005634
GO:GO:0030154 GO:GO:0030325 GO:GO:0005543 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003682 GO:GO:0003705 GO:GO:0008584 GO:GO:0003690
GO:GO:0042445 GO:GO:0051457 GO:GO:0010259 GO:GO:0001553
GO:GO:2000020 GO:GO:0009888 GO:GO:2000195 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
PDB:1YMT PDBsum:1YMT PDB:1YP0 PDBsum:1YP0 HOVERGEN:HBG106677
EMBL:AL844842 PDB:3F7D PDBsum:3F7D CTD:2516 KO:K08560 OMA:PFGLMCK
OrthoDB:EOG4FJ891 EMBL:D10584 EMBL:S65878 EMBL:S65875 EMBL:S65919
EMBL:S65876 EMBL:S65877 EMBL:AF511594 EMBL:AK134378 EMBL:AK144376
EMBL:BC110476 EMBL:BC110477 IPI:IPI00107985 IPI:IPI00330060
PIR:A40716 PIR:A42128 RefSeq:NP_620639.1 UniGene:Mm.31387 PDB:2FF0
PDBsum:2FF0 ProteinModelPortal:P33242 SMR:P33242 STRING:P33242
PhosphoSite:P33242 PRIDE:P33242 Ensembl:ENSMUST00000028084
Ensembl:ENSMUST00000112883 GeneID:26423 KEGG:mmu:26423
InParanoid:Q812G5 ChEMBL:CHEMBL1764943 EvolutionaryTrace:P33242
NextBio:304449 Bgee:P33242 CleanEx:MM_NR5A1 Genevestigator:P33242
GermOnline:ENSMUSG00000026751 Uniprot:P33242
Length = 462
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>RGD|68350 [details] [associations]
symbol:Nr5a1 "nuclear receptor subfamily 5, group A, member 1"
species:10116 "Rattus norvegicus" [GO:0001553 "luteinization"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=NAS] [GO:0005543 "phospholipid binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA;ISO] [GO:0008585
"female gonad development" evidence=IEP] [GO:0009888 "tissue
development" evidence=IEA;ISO] [GO:0010259 "multicellular organismal
aging" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IEA;ISO] [GO:0022414 "reproductive process" evidence=ISO]
[GO:0030154 "cell differentiation" evidence=IEA;ISO] [GO:0030325
"adrenal gland development" evidence=IEA;ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=NAS]
[GO:0042445 "hormone metabolic process" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051457
"maintenance of protein location in nucleus" evidence=IEA;ISO]
[GO:2000020 "positive regulation of male gonad development"
evidence=IEA;ISO] [GO:2000195 "negative regulation of female gonad
development" evidence=IEA;ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:68350 GO:GO:0005634 GO:GO:0030154 GO:GO:0030325 GO:GO:0008585
GO:GO:0005543 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003682 GO:GO:0003705
GO:GO:0008584 GO:GO:0003690 GO:GO:0051457 GO:GO:0001553
GO:GO:0009888 GO:GO:2000195 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 CTD:2516 KO:K08560
OMA:PFGLMCK OrthoDB:EOG4FJ891 EMBL:D42156 IPI:IPI00199452 PIR:A56120
RefSeq:NP_001178028.1 UniGene:Rn.229378 ProteinModelPortal:P50569
SMR:P50569 STRING:P50569 PhosphoSite:P50569 PRIDE:P50569
Ensembl:ENSRNOT00000017651 GeneID:83826 KEGG:rno:83826
UCSC:RGD:68350 InParanoid:P50569 NextBio:616450 ArrayExpress:P50569
Genevestigator:P50569 GermOnline:ENSRNOG00000012682 Uniprot:P50569
Length = 462
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>UNIPROTKB|F1LQ71 [details] [associations]
symbol:Nr5a1 "Steroidogenic factor 1" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:68350 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
InterPro:IPR016355 PIRSF:PIRSF002530 IPI:IPI00557316
Ensembl:ENSRNOT00000042720 ArrayExpress:F1LQ71 Uniprot:F1LQ71
Length = 380
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E ++ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC +SC IDKTQRKRCP
Sbjct: 7 EDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLTVGMRLE 81
>MGI|MGI:1346834 [details] [associations]
symbol:Nr5a2 "nuclear receptor subfamily 5, group A, member
2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO] [GO:0005543
"phospholipid binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0008206 "bile acid metabolic process" evidence=IMP] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IGI] [GO:0042632 "cholesterol homeostasis"
evidence=IMP] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045070 "positive regulation of viral
genome replication" evidence=ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] Reactome:REACT_13641 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1346834 GO:GO:0005829 GO:GO:0005634
GO:GO:0008206 GO:GO:0005543 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0042632 GO:GO:0042127 GO:GO:0044212
Reactome:REACT_127416 GO:GO:0030522 GO:GO:0031018 GO:GO:0045070
eggNOG:NOG240365 GeneTree:ENSGT00670000097927 InterPro:IPR016355
PIRSF:PIRSF002530 PDB:3F5C PDBsum:3F5C PDB:1ZH7 PDBsum:1ZH7
CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677 KO:K08027
OrthoDB:EOG470TH1 OMA:NTFGLMC EMBL:M81385 EMBL:BC137845
IPI:IPI00129665 PIR:S27874 RefSeq:NP_109601.1 UniGene:Mm.16794
PDB:1PK5 PDBsum:1PK5 ProteinModelPortal:P45448 SMR:P45448
STRING:P45448 PhosphoSite:P45448 PRIDE:P45448
Ensembl:ENSMUST00000027649 GeneID:26424 KEGG:mmu:26424
UCSC:uc007cvc.2 InParanoid:P45448 EvolutionaryTrace:P45448
NextBio:304453 Bgee:P45448 CleanEx:MM_NR5A2 Genevestigator:P45448
GermOnline:ENSMUSG00000026398 Uniprot:P45448
Length = 560
Score = 365 (133.5 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 61/75 (81%), Positives = 70/75 (93%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN+K YTC+ ++C IDKTQRKRCP
Sbjct: 101 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCP 160
Query: 184 FCRFQKCLEVGMKLE 198
+CRF+KC++VGMKLE
Sbjct: 161 YCRFKKCIDVGMKLE 175
>RGD|68353 [details] [associations]
symbol:Nr5a2 "nuclear receptor subfamily 5, group A, member 2"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0005543
"phospholipid binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0008206 "bile acid metabolic process"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=IDA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042632 "cholesterol homeostasis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045070 "positive regulation of viral
genome replication" evidence=IEA;ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:68353 GO:GO:0005634 GO:GO:0005737 GO:GO:0008206
GO:GO:0005543 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0042632 GO:GO:0042127
GO:GO:0044212 GO:GO:0003690 GO:GO:0045070 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677 KO:K08027
OrthoDB:EOG470TH1 OMA:NTFGLMC EMBL:AB012960 EMBL:AB012961
IPI:IPI00212414 IPI:IPI00212417 RefSeq:NP_068510.1 UniGene:Rn.42941
ProteinModelPortal:Q9QWM1 SMR:Q9QWM1 STRING:Q9QWM1
PhosphoSite:Q9QWM1 Ensembl:ENSRNOT00000000811
Ensembl:ENSRNOT00000000812 GeneID:60349 KEGG:rno:60349
UCSC:RGD:68353 InParanoid:Q9QWM1 NextBio:612007
Genevestigator:Q9QWM1 GermOnline:ENSRNOG00000000653 Uniprot:Q9QWM1
Length = 560
Score = 365 (133.5 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 61/75 (81%), Positives = 70/75 (93%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN+K YTC+ ++C IDKTQRKRCP
Sbjct: 101 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCP 160
Query: 184 FCRFQKCLEVGMKLE 198
+CRF+KC++VGMKLE
Sbjct: 161 YCRFKKCIDVGMKLE 175
>ZFIN|ZDB-GENE-010504-1 [details] [associations]
symbol:nr5a1a "nuclear receptor subfamily 5, group A,
member 1a" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA;NAS;IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030325 "adrenal gland development" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA;IDA] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-010504-1 GO:GO:0005634 GO:GO:0030325
GO:GO:0046872 GO:GO:0003677 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0021854 HSSP:P19793
InterPro:IPR016355 PIRSF:PIRSF002530 HOGENOM:HOG000063718
HOVERGEN:HBG106677 EMBL:AF198086 IPI:IPI00492563 RefSeq:NP_571869.1
UniGene:Dr.53400 ProteinModelPortal:Q9IAI9 SMR:Q9IAI9 STRING:Q9IAI9
GeneID:83916 KEGG:dre:83916 CTD:83916 InParanoid:Q9IAI9
NextBio:20934198 ArrayExpress:Q9IAI9 Uniprot:Q9IAI9
Length = 454
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 63/75 (84%), Positives = 66/75 (88%)
Query: 124 EGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCP 183
E +EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCP
Sbjct: 7 EDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCTQNQDCGIDKTQRKRCP 66
Query: 184 FCRFQKCLEVGMKLE 198
FCRFQKCL VGM+LE
Sbjct: 67 FCRFQKCLSVGMRLE 81
>ZFIN|ZDB-GENE-040702-6 [details] [associations]
symbol:nr5a1b "nuclear receptor subfamily 5, group A,
member 1b" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;NAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040702-6 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG240365 GeneTree:ENSGT00670000097927 EMBL:AL772368
InterPro:IPR016355 PIRSF:PIRSF002530 HOGENOM:HOG000063718
HOVERGEN:HBG106677 EMBL:FP016184 EMBL:FP085418 EMBL:BC162252
EMBL:BC162260 EMBL:AY212920 IPI:IPI00497101 RefSeq:NP_997999.1
UniGene:Dr.30454 HSSP:P45448 SMR:Q800U8 Ensembl:ENSDART00000028265
GeneID:405759 KEGG:dre:405759 CTD:405759 InParanoid:Q800U8
OMA:YCITANS OrthoDB:EOG4P2Q2C NextBio:20817729 Uniprot:Q800U8
Length = 502
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 61/73 (83%), Positives = 65/73 (89%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+EE+CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN K YTC + C IDKTQRKRCPFC
Sbjct: 9 LEEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAESQDCKIDKTQRKRCPFC 68
Query: 186 RFQKCLEVGMKLE 198
RFQKCL VGM+LE
Sbjct: 69 RFQKCLNVGMRLE 81
>WB|WBGene00003623 [details] [associations]
symbol:nhr-25 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0018991
"oviposition" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0019915 "lipid storage" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040018 "positive regulation
of multicellular organism growth" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040026 "positive regulation of
vulval development" evidence=IMP] [GO:0040039 "inductive cell
migration" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0009792 GO:GO:0018991 GO:GO:0040010
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0046872
GO:GO:0018996 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0010171
GO:GO:0040018 GO:GO:0003700 GO:GO:0006351 GO:GO:0019915
GO:GO:0040039 GO:GO:0040026 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 EMBL:AF179214 EMBL:AF179215
EMBL:AF179216 EMBL:Z54270 PIR:T20764 RefSeq:NP_001024550.1
RefSeq:NP_001024551.1 ProteinModelPortal:Q19345 SMR:Q19345
IntAct:Q19345 STRING:Q19345 PaxDb:Q19345 PRIDE:Q19345
EnsemblMetazoa:F11C1.6a GeneID:181432 KEGG:cel:CELE_F11C1.6
UCSC:F11C1.6b.2 CTD:181432 WormBase:F11C1.6a WormBase:F11C1.6b
HOGENOM:HOG000021002 InParanoid:Q19345 OMA:RPNHEGE NextBio:913918
InterPro:IPR016355 PIRSF:PIRSF002530 Uniprot:Q19345
Length = 572
Score = 340 (124.7 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E+CPVCGD+VSGYHYGLLTCESCKGFFKRTVQNKK Y C AE +CH+D+T RKRCP CRF
Sbjct: 16 EMCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKQYQCSAEANCHVDRTCRKRCPSCRF 75
Query: 188 QKCLEVGMKLE 198
QKCL +GMK+E
Sbjct: 76 QKCLTMGMKME 86
>UNIPROTKB|Q19345 [details] [associations]
symbol:nhr-25 "Nuclear hormone receptor family member
nhr-25" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] [GO:0070016 "armadillo repeat domain
binding" evidence=IPI] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0009792 GO:GO:0018991 GO:GO:0040010
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0046872
GO:GO:0018996 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0010171
GO:GO:0040018 GO:GO:0003700 GO:GO:0006351 GO:GO:0019915
GO:GO:0040039 GO:GO:0040026 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 EMBL:AF179214 EMBL:AF179215
EMBL:AF179216 EMBL:Z54270 PIR:T20764 RefSeq:NP_001024550.1
RefSeq:NP_001024551.1 ProteinModelPortal:Q19345 SMR:Q19345
IntAct:Q19345 STRING:Q19345 PaxDb:Q19345 PRIDE:Q19345
EnsemblMetazoa:F11C1.6a GeneID:181432 KEGG:cel:CELE_F11C1.6
UCSC:F11C1.6b.2 CTD:181432 WormBase:F11C1.6a WormBase:F11C1.6b
HOGENOM:HOG000021002 InParanoid:Q19345 OMA:RPNHEGE NextBio:913918
InterPro:IPR016355 PIRSF:PIRSF002530 Uniprot:Q19345
Length = 572
Score = 340 (124.7 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E+CPVCGD+VSGYHYGLLTCESCKGFFKRTVQNKK Y C AE +CH+D+T RKRCP CRF
Sbjct: 16 EMCPVCGDRVSGYHYGLLTCESCKGFFKRTVQNKKQYQCSAEANCHVDRTCRKRCPSCRF 75
Query: 188 QKCLEVGMKLE 198
QKCL +GMK+E
Sbjct: 76 QKCLTMGMKME 86
>ZFIN|ZDB-GENE-030131-4652 [details] [associations]
symbol:nr5a5 "nuclear receptor subfamily 5, group
A, member 5" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA;NAS;IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-030131-4652 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HSSP:P03372 InterPro:IPR016355 PIRSF:PIRSF002530 HOVERGEN:HBG106677
EMBL:AF327373 IPI:IPI00508517 RefSeq:NP_999944.1 UniGene:Dr.11921
ProteinModelPortal:Q98ST8 SMR:Q98ST8 GeneID:407626 KEGG:dre:407626
CTD:407626 InParanoid:Q98ST8 NextBio:20818501 ArrayExpress:Q98ST8
Uniprot:Q98ST8
Length = 537
Score = 321 (118.1 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 57/88 (64%), Positives = 66/88 (75%)
Query: 111 STIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 170
ST P++ EE CPVCGD+VSGYHYGLLTCESCKGFFKR+VQN K YTC +
Sbjct: 32 STSQELKPDPESSATQEEGCPVCGDRVSGYHYGLLTCESCKGFFKRSVQNNKRYTCAEAQ 91
Query: 171 SCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
+C +D QRKRCP+CRFQKC+ VGMK E
Sbjct: 92 NCPMDLAQRKRCPYCRFQKCVAVGMKKE 119
>FB|FBgn0261239 [details] [associations]
symbol:Hr39 "Hormone receptor-like in 39" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS;NAS;IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS;IDA] [GO:0000978 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;NAS]
[GO:0003712 "transcription cofactor activity" evidence=NAS]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0016321 "female meiosis
chromosome segregation" evidence=IMP] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0035072 "ecdysone-mediated induction of salivary gland cell
autophagic cell death" evidence=IMP] [GO:0035211 "spermathecum
morphogenesis" evidence=IMP] [GO:0060968 "regulation of gene
silencing" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 EMBL:AE014134 GO:GO:0046872 GO:GO:0004879
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0000978 GO:GO:0006919 GO:GO:0016321
GO:GO:0035072 GO:GO:0060968 EMBL:L06423 EMBL:L07551 EMBL:L07549
EMBL:L07550 EMBL:AY069676 PIR:S33708 PIR:S33709 RefSeq:NP_476932.1
RefSeq:NP_476933.1 RefSeq:NP_599123.1 RefSeq:NP_724322.1
UniGene:Dm.4837 ProteinModelPortal:Q05192 SMR:Q05192 IntAct:Q05192
MINT:MINT-807520 STRING:Q05192 EnsemblMetazoa:FBtr0081479
EnsemblMetazoa:FBtr0081480 EnsemblMetazoa:FBtr0081481 GeneID:35398
KEGG:dme:Dmel_CG8676 CTD:35398 FlyBase:FBgn0261239 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InParanoid:Q05192 KO:K08705
OMA:YTLAHYP OrthoDB:EOG4P8D09 PhylomeDB:Q05192 GenomeRNAi:35398
NextBio:793317 Bgee:Q05192 GermOnline:CG8676 GO:GO:0035211
Uniprot:Q05192
Length = 808
Score = 302 (111.4 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 71/196 (36%), Positives = 100/196 (51%)
Query: 28 TPIQQLLSAATGAQTPQMQHSNNDTQ-------SSQLSPMLGNNTXXXX--XXXXYN--- 75
+P Q L++ TP + +N+D SS+ SP Y
Sbjct: 258 SPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPAGTLYGNHH 317
Query: 76 --FNNM-VDNSYLFQSPGGGSTNMDLSSAGISYHPFHT-STIAATPEHPDTKEGIEELCP 131
+ M V+ S S G + N+ + SA + S+ A+P ++ I CP
Sbjct: 318 GIYRQMKVEASSTVPSSGQEAQNLSMDSASSNLDTVGLGSSHPASPAGISRQQLINSPCP 377
Query: 132 VCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCL 191
+CGDK+SG+HYG+ +CESCKGFFKRTVQN+K Y CV C + + RK+CP CRF+KCL
Sbjct: 378 ICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCL 437
Query: 192 EVGMKLE-VSSQSTHG 206
+ GMKLE + T G
Sbjct: 438 QKGMKLEAIREDRTRG 453
>FB|FBgn0264562 [details] [associations]
symbol:Hr4 "Hr4" species:7227 "Drosophila melanogaster"
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISS;IMP;NAS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007552 "metamorphosis"
evidence=NAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035073 "pupariation"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0030518
"intracellular steroid hormone receptor signaling pathway"
evidence=IMP] [GO:0071456 "cellular response to hypoxia"
evidence=IMP] [GO:0048638 "regulation of developmental growth"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0040007 GO:GO:0046872 EMBL:AE014298
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071456
GO:GO:0030518 GeneTree:ENSGT00670000097927 eggNOG:NOG253308
EMBL:AY971884 EMBL:AL035245 RefSeq:NP_001033823.1 UniGene:Dm.26541
ProteinModelPortal:Q9W539 SMR:Q9W539 STRING:Q9W539
EnsemblMetazoa:FBtr0333341 GeneID:31162 KEGG:dme:Dmel_CG16902
UCSC:CG16902-RC CTD:31162 FlyBase:FBgn0263775 InParanoid:Q9W539
KO:K09185 OMA:WHEILIL OrthoDB:EOG4X95ZR PhylomeDB:Q9W539
GenomeRNAi:31162 NextBio:772237 GermOnline:CG16902 Uniprot:Q9W539
Length = 1518
Score = 283 (104.7 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 48/81 (59%), Positives = 61/81 (75%)
Query: 119 HPDTKEGIEEL-CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKT 177
H T E + L C +C DK +G HYG++TCE CKGFFKRTVQN++VYTCVA+ +C I K
Sbjct: 909 HEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITKA 968
Query: 178 QRKRCPFCRFQKCLEVGMKLE 198
QR RC +CRF+KC+E GM L+
Sbjct: 969 QRNRCQYCRFKKCIEQGMVLQ 989
Score = 42 (19.8 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 41 QTPQMQHSNNDTQSSQLSPMLGNNT 65
Q P H ++ + SSQLSP + T
Sbjct: 684 QCPS-PHPSSSSSSSQLSPQTPSQT 707
Score = 37 (18.1 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 31 QQLLSAATGAQTPQMQHSNNDTQSSQ 56
Q+ LS Q+P +QH Q Q
Sbjct: 540 QRHLSPHHQQQSPLLQHHQQQQQQQQ 565
Score = 36 (17.7 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 90 GGGSTNMDLSSAGISYHPFHTSTIAAT 116
GG T + S AG T+ AAT
Sbjct: 119 GGAGTAVTASGAGPCVSTSSTTAAAAT 145
Score = 35 (17.4 bits), Expect = 6.1e-24, Sum P(2) = 6.1e-24
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 31 QQLLSAATGAQTPQMQHSNNDTQSSQLSPMLG 62
QQ A+ Q Q QHS + + P +G
Sbjct: 508 QQQQQASHPQQQQQQQHSPHSLVRVKKEPNVG 539
>UNIPROTKB|E9PBQ4 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
EMBL:AC074099 HGNC:HGNC:7981 ChiTaRS:NR4A2 IPI:IPI00924923
SMR:E9PBQ4 Ensembl:ENST00000417764 Ensembl:ENST00000417972
Uniprot:E9PBQ4
Length = 392
Score = 259 (96.2 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 49/94 (52%), Positives = 58/94 (61%)
Query: 109 HTSTIAAT--PEHPDTKEGIEE-LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H S + T P P E LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 176 HASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV 235
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 236 CLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEV 269
Score = 35 (17.4 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 QHSNNDTQSSQLSPMLGN 63
QHS+ QS ++ P G+
Sbjct: 39 QHSHLPPQSEEMMPHSGS 56
>UNIPROTKB|P28701 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
HOVERGEN:HBG005606 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 EMBL:X58997 EMBL:S72435 IPI:IPI00584417 IPI:IPI00600229
PIR:A43781 PIR:S46479 RefSeq:NP_990625.1 UniGene:Gga.717
ProteinModelPortal:P28701 SMR:P28701 STRING:P28701 GeneID:396231
KEGG:gga:396231 InParanoid:P28701 NextBio:20816283 Uniprot:P28701
Length = 467
Score = 265 (98.3 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
Identities = 44/90 (48%), Positives = 59/90 (65%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G + +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 130 YPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 189
Query: 177 TQRKRCPFCRFQKCLEVGMKLEVSSQSTHG 206
QR RC +CR+QKCL +GMK E + G
Sbjct: 190 RQRNRCQYCRYQKCLAMGMKREAVQEERQG 219
Score = 35 (17.4 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 33 LLSAATG----AQTPQMQHSNNDTQSSQLSPMLG 62
L S+A G +PQ NN + S + P+ G
Sbjct: 88 LSSSAPGMNFVTHSPQPNVLNNVSSSEDIKPLPG 121
>UNIPROTKB|F1NSP3 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GeneTree:ENSGT00690000101777 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 IPI:IPI00600229 EMBL:AADN02034021 EMBL:AADN02034022
EMBL:AADN02034023 Ensembl:ENSGALT00000005387 OMA:FIKFPAG
Uniprot:F1NSP3
Length = 467
Score = 260 (96.6 bits), Expect = 6.4e-24, Sum P(2) = 6.4e-24
Identities = 43/82 (52%), Positives = 57/82 (69%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G + +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 130 YPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 189
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 190 RQRNRCQYCRYQKCLAMGMKRE 211
Score = 39 (18.8 bits), Expect = 6.4e-24, Sum P(2) = 6.4e-24
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 33 LLSAATG----AQTPQMQHSNNDTQSSQLSPMLG 62
L S+A G +PQ+ NN + S + P+ G
Sbjct: 88 LSSSAPGMNFVTHSPQLNVLNNVSSSEDIKPLPG 121
>ZFIN|ZDB-GENE-070824-4 [details] [associations]
symbol:nr4a3 "nuclear receptor subfamily 4, group A,
member 3" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003073 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-070824-4 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 eggNOG:NOG245120 HOGENOM:HOG000230925
HOVERGEN:HBG052663 OrthoDB:EOG4894MB EMBL:DQ017611 IPI:IPI00510220
UniGene:Dr.76117 ProteinModelPortal:Q1L695 SMR:Q1L695
InParanoid:Q1L695 Uniprot:Q1L695
Length = 594
Score = 266 (98.7 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 59/158 (37%), Positives = 84/158 (53%)
Query: 43 PQMQHSNNDTQSSQLSPMLGNNTXXXXXXXXYNFNNMVDNSYLFQSPGGGSTNMDLSSAG 102
P+ S++ + SS + P + +T + +NM + PGG + S G
Sbjct: 179 PERSPSSSSS-SSHVPPNM--DTHAHSHVHSHTHSNMYPIN--MGKPGG----LAFRSLG 229
Query: 103 ISY-HPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNK 161
+ + P ++ + P + EG C VCGD + HYG+ TCE CKGFFKRTVQ
Sbjct: 230 MGHCPPLLGESLPSPPNRTSSGEGT---CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKN 286
Query: 162 KVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 287 AKYVCLASKNCPVDKRRRNRCQYCRFQKCLSVGMVKEV 324
Score = 35 (17.4 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 193 VGMKLEVSSQSTHGV 207
+G++ E+ SQ T G+
Sbjct: 553 LGLRAELRSQRTQGL 567
>UNIPROTKB|C9J8W4 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000230925 EMBL:AC074099 HGNC:HGNC:7981 ChiTaRS:NR4A2
IPI:IPI00927888 ProteinModelPortal:C9J8W4 SMR:C9J8W4 STRING:C9J8W4
Ensembl:ENST00000429376 ArrayExpress:C9J8W4 Bgee:C9J8W4
Uniprot:C9J8W4
Length = 490
Score = 259 (96.2 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 49/94 (52%), Positives = 58/94 (61%)
Query: 109 HTSTIAAT--PEHPDTKEGIEE-LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H S + T P P E LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 176 HASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV 235
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 236 CLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEV 269
Score = 35 (17.4 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 QHSNNDTQSSQLSPMLGN 63
QHS+ QS ++ P G+
Sbjct: 39 QHSHLPPQSEEMMPHSGS 56
>UNIPROTKB|Q3LZI9 [details] [associations]
symbol:Nr4a2 "Nuclear receptor subfamily 4 group A member 2
variant NURR1c" species:10116 "Rattus norvegicus" [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003073
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 RGD:3202
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 HOGENOM:HOG000230925
HOVERGEN:HBG052663 UniGene:Rn.88129 EMBL:DQ092629 IPI:IPI00778010
SMR:Q3LZI9 STRING:Q3LZI9 Ensembl:ENSRNOT00000007799
Genevestigator:Q3LZI9 Uniprot:Q3LZI9
Length = 500
Score = 259 (96.2 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 49/94 (52%), Positives = 58/94 (61%)
Query: 109 HTSTIAAT--PEHPDTKEGIEE-LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H S + T P P E LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 239 HASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV 298
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 299 CLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEV 332
Score = 35 (17.4 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 QHSNNDTQSSQLSPMLGN 63
QHS+ QS ++ P G+
Sbjct: 102 QHSHLPPQSEEMMPHSGS 119
>UNIPROTKB|E2RRN7 [details] [associations]
symbol:NR4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003073 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00640000091364 EMBL:AAEX03017669
Ensembl:ENSCAFT00000037480 Uniprot:E2RRN7
Length = 507
Score = 259 (96.2 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 49/94 (52%), Positives = 58/94 (61%)
Query: 109 HTSTIAAT--PEHPDTKEGIEE-LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H S + T P P E LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 239 HASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV 298
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 299 CLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEV 332
Score = 35 (17.4 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 QHSNNDTQSSQLSPMLGN 63
QHS+ QS ++ P G+
Sbjct: 102 QHSHLPPQSEEMMPHSGS 119
>UNIPROTKB|F1MWQ3 [details] [associations]
symbol:RARA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IEA] [GO:0061037 "negative regulation of cartilage
development" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0051099 "positive
regulation of binding" evidence=IEA] [GO:0051018 "protein kinase A
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0043422 "protein
kinase B binding" evidence=IEA] [GO:0043277 "apoptotic cell
clearance" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032754 "positive regulation of interleukin-5
production" evidence=IEA] [GO:0032753 "positive regulation of
interleukin-4 production" evidence=IEA] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=IEA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=IEA] [GO:0032355 "response to estradiol
stimulus" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0003714 GO:GO:0032689 GO:GO:0032355 GO:GO:0046872
GO:GO:0045947 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0006468 GO:GO:0007283 GO:GO:0071222 GO:GO:0000122
GO:GO:0000790 GO:GO:0003713 GO:GO:0032720 GO:GO:0007281
GO:GO:0035264 GO:GO:0030853 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
GO:GO:0001972 GO:GO:0060591 GO:GO:0003708 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
GeneTree:ENSGT00680000099662 KO:K08527 OMA:RTENVCI CTD:5914
GO:GO:0060010 EMBL:DAAA02049130 EMBL:DAAA02049137 EMBL:DAAA02049131
EMBL:DAAA02049132 EMBL:DAAA02049133 EMBL:DAAA02049134
EMBL:DAAA02049135 EMBL:DAAA02049136 IPI:IPI00709635
RefSeq:NP_001014942.2 UniGene:Bt.8306 Ensembl:ENSBTAT00000016586
GeneID:534280 KEGG:bta:534280 NextBio:20876336 Uniprot:F1MWQ3
Length = 462
Score = 253 (94.1 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 47/100 (47%), Positives = 59/100 (59%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
S A I + I +P P I + C VC DK SGYHYG+ CE CKGFF+R++
Sbjct: 57 SPATIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSI 116
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 117 QKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 156
Score = 38 (18.4 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 79 MVDNSYLFQSPGGGSTN 95
M NS +PGGG N
Sbjct: 1 MASNSSSCPTPGGGHLN 17
>UNIPROTKB|F1PN49 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:AAEX03006463 EMBL:AAEX03006464
EMBL:AAEX03006465 ProteinModelPortal:F1PN49
Ensembl:ENSCAFT00000011311 Uniprot:F1PN49
Length = 462
Score = 253 (94.1 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 47/100 (47%), Positives = 59/100 (59%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
S A I + I +P P I + C VC DK SGYHYG+ CE CKGFF+R++
Sbjct: 57 SPATIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSI 116
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 117 QKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 156
Score = 38 (18.4 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 79 MVDNSYLFQSPGGGSTN 95
M NS +PGGG N
Sbjct: 1 MASNSSSCPTPGGGHLN 17
>UNIPROTKB|Q5FBR4 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448
HOGENOM:HOG000010312 KO:K08527 EMBL:AB179779 RefSeq:NP_001012663.1
UniGene:Cfa.45823 ProteinModelPortal:Q5FBR4 SMR:Q5FBR4
STRING:Q5FBR4 GeneID:480526 KEGG:cfa:480526 CTD:5914
NextBio:20855534 Uniprot:Q5FBR4
Length = 462
Score = 253 (94.1 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 47/100 (47%), Positives = 59/100 (59%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
S A I + I +P P I + C VC DK SGYHYG+ CE CKGFF+R++
Sbjct: 57 SPATIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSI 116
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 117 QKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 156
Score = 38 (18.4 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 79 MVDNSYLFQSPGGGSTN 95
M NS +PGGG N
Sbjct: 1 MASNSSSCPTPGGGHLN 17
>UNIPROTKB|P10276 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0007281 "germ cell development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0014068 "positive regulation of phosphatidylinositol 3-kinase
cascade" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0035014 "phosphatidylinositol 3-kinase regulator activity"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0045947 "negative regulation of translational initiation"
evidence=IEA] [GO:0051897 "positive regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0055012 "ventricular cardiac
muscle cell differentiation" evidence=IEA] [GO:0060010 "Sertoli
cell fate commitment" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0061037 "negative regulation of
cartilage development" evidence=IEA] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=IEA] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051099 "positive regulation of binding" evidence=IMP]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=IMP;IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045787 "positive regulation of
cell cycle" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IDA] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0071300 "cellular
response to retinoic acid" evidence=IDA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0043277 "apoptotic cell clearance"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IMP]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0043422 "protein kinase B binding" evidence=IPI] [GO:0051018
"protein kinase A binding" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0001972 "retinoic acid binding" evidence=IDA]
[GO:0003708 "retinoic acid receptor activity" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IDA] [GO:0030520
"intracellular estrogen receptor signaling pathway" evidence=IDA]
[GO:0032355 "response to estradiol stimulus" evidence=IDA]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IDA] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IDA] [GO:0032736 "positive regulation
of interleukin-13 production" evidence=IDA] [GO:0032753 "positive
regulation of interleukin-4 production" evidence=IDA] [GO:0032754
"positive regulation of interleukin-5 production" evidence=IDA]
[GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IDA] [GO:0009986 "cell surface"
evidence=IC] [GO:0032526 "response to retinoic acid" evidence=IMP]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0005654 GO:GO:0009986 GO:GO:0032689
GO:GO:0032355 GO:GO:0046872 GO:GO:0045947 GO:GO:0008284
GO:GO:0043025 GO:GO:0030425 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 GO:GO:0005102 GO:GO:0006468
GO:GO:0007283 Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0071222
GO:GO:0000122 GO:GO:0000790 GO:GO:0003713 GO:GO:0032720
GO:GO:0007281 GO:GO:0046982 GO:GO:0035264 GO:GO:0030853
GO:GO:0051018 Pathway_Interaction_DB:retinoic_acid_pathway
DrugBank:DB00459 GO:GO:0006367 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
HOVERGEN:HBG005606 GO:GO:0001972 GO:GO:0060591 GO:GO:0003708
GO:GO:0032736 GO:GO:0032754 GO:GO:0061037 GO:GO:0055012
GO:GO:0044323 PDB:3KMR PDB:4DQM PDBsum:3KMR PDBsum:4DQM PDB:3A9E
PDBsum:3A9E PDB:3KMZ PDBsum:3KMZ EMBL:U41742 EMBL:U41743
Orphanet:520 EMBL:AB067754 DrugBank:DB00523 DrugBank:DB00926
eggNOG:NOG297448 HOGENOM:HOG000010312 KO:K08527 OMA:RTENVCI
CTD:5914 EMBL:X06614 EMBL:X06538 EMBL:AF088895 EMBL:AF088889
EMBL:AF088890 EMBL:AF088891 EMBL:AF088892 EMBL:AF088893
EMBL:AF088894 EMBL:FJ487576 EMBL:AC080112 EMBL:BC008727
EMBL:BC071733 EMBL:X56058 EMBL:X58685 EMBL:AF283809 IPI:IPI00020071
IPI:IPI00218375 IPI:IPI00922641 PIR:A29491 RefSeq:NP_000955.1
RefSeq:NP_001019980.1 RefSeq:NP_001138773.1 RefSeq:NP_001138774.1
UniGene:Hs.654583 PDB:1DKF PDB:1DSZ PDBsum:1DKF PDBsum:1DSZ
ProteinModelPortal:P10276 SMR:P10276 DIP:DIP-34N IntAct:P10276
MINT:MINT-123081 STRING:P10276 PhosphoSite:P10276 DMDM:133483
PaxDb:P10276 PRIDE:P10276 DNASU:5914 Ensembl:ENST00000254066
Ensembl:ENST00000394081 Ensembl:ENST00000394089
Ensembl:ENST00000425707 GeneID:5914 KEGG:hsa:5914 UCSC:uc002huk.2
GeneCards:GC17P038465 HGNC:HGNC:9864 MIM:180240 MIM:612376
neXtProt:NX_P10276 PharmGKB:PA34225 PhylomeDB:P10276
BindingDB:P10276 ChEMBL:CHEMBL2055 ChiTaRS:RARA DrugBank:DB00210
DrugBank:DB00982 DrugBank:DB04942 DrugBank:DB00799
EvolutionaryTrace:P10276 GenomeRNAi:5914 NextBio:23018
ArrayExpress:P10276 Bgee:P10276 CleanEx:HS_RARA
Genevestigator:P10276 GermOnline:ENSG00000131759 GO:GO:0060010
Uniprot:P10276
Length = 462
Score = 253 (94.1 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 47/100 (47%), Positives = 59/100 (59%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
S A I + I +P P I + C VC DK SGYHYG+ CE CKGFF+R++
Sbjct: 57 SPATIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSI 116
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 117 QKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 156
Score = 38 (18.4 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 79 MVDNSYLFQSPGGGSTN 95
M NS +PGGG N
Sbjct: 1 MASNSSSCPTPGGGHLN 17
>UNIPROTKB|F1RXC9 [details] [associations]
symbol:RARA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IEA] [GO:0061037 "negative regulation of cartilage
development" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0051099 "positive
regulation of binding" evidence=IEA] [GO:0051018 "protein kinase A
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0043422 "protein
kinase B binding" evidence=IEA] [GO:0043277 "apoptotic cell
clearance" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032754 "positive regulation of interleukin-5
production" evidence=IEA] [GO:0032753 "positive regulation of
interleukin-4 production" evidence=IEA] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=IEA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=IEA] [GO:0032355 "response to estradiol
stimulus" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0003714 GO:GO:0032689 GO:GO:0032355 GO:GO:0046872
GO:GO:0045947 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0006468 GO:GO:0007283 GO:GO:0071222 GO:GO:0000122
GO:GO:0000790 GO:GO:0003713 GO:GO:0032720 GO:GO:0007281
GO:GO:0035264 GO:GO:0030853 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
GO:GO:0001972 GO:GO:0060591 GO:GO:0003708 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
GeneTree:ENSGT00680000099662 KO:K08527 OMA:RTENVCI GO:GO:0060010
EMBL:CU928542 RefSeq:XP_003131522.1 RefSeq:XP_003358102.1
UniGene:Ssc.15829 Ensembl:ENSSSCT00000019026 GeneID:396709
KEGG:ssc:396709 ArrayExpress:F1RXC9 Uniprot:F1RXC9
Length = 462
Score = 253 (94.1 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 47/100 (47%), Positives = 59/100 (59%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
S A I + I +P P I + C VC DK SGYHYG+ CE CKGFF+R++
Sbjct: 57 SPATIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSI 116
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 117 QKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 156
Score = 38 (18.4 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 79 MVDNSYLFQSPGGGSTN 95
M NS +PGGG N
Sbjct: 1 MASNSSSCPTPGGGHLN 17
>UNIPROTKB|G3V956 [details] [associations]
symbol:Rara "Protein Rara" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3534 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:CH473948 GO:GO:0003708
OMA:RTENVCI UniGene:Rn.91057 Ensembl:ENSRNOT00000036872
Uniprot:G3V956
Length = 462
Score = 253 (94.1 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 47/100 (47%), Positives = 59/100 (59%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
S A I + I +P P I + C VC DK SGYHYG+ CE CKGFF+R++
Sbjct: 57 SPATIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSI 116
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 117 QKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 156
Score = 38 (18.4 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 79 MVDNSYLFQSPGGGSTN 95
M NS +PGGG N
Sbjct: 1 MASNSSSCPTPGGGHLN 17
>UNIPROTKB|Q6NXU0 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4, group A, member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001975 "response
to amphetamine" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0010035 "response to inorganic substance"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0017085
"response to insecticide" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021986 "habenula development" evidence=IEA] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0042053 "regulation
of dopamine metabolic process" evidence=IEA] [GO:0042416 "dopamine
biosynthetic process" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0043085 "positive regulation of catalytic
activity" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0043085 GO:GO:0001764 GO:GO:0033554
GO:GO:0046872 GO:GO:0071542 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944 GO:GO:0008344
GO:GO:0001975 GO:GO:0043524 GO:GO:0009791 GO:GO:0010035
GO:GO:0042416 GO:GO:0021952 GO:GO:0042053 GO:GO:0016265
GO:GO:0030522 GO:GO:0043576 GO:GO:0017085 GO:GO:0042551
GO:GO:0021986 HOGENOM:HOG000230925 HOVERGEN:HBG052663 EMBL:AC074099
UniGene:Hs.563344 HGNC:HGNC:7981 ChiTaRS:NR4A2 HSSP:P20393
EMBL:BC066890 EMBL:AK291456 IPI:IPI00927645 SMR:Q6NXU0
STRING:Q6NXU0 Ensembl:ENST00000426264 Uniprot:Q6NXU0
Length = 535
Score = 259 (96.2 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 49/94 (52%), Positives = 58/94 (61%)
Query: 109 HTSTIAAT--PEHPDTKEGIEE-LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H S + T P P E LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 176 HASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV 235
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 236 CLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEV 269
Score = 35 (17.4 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 QHSNNDTQSSQLSPMLGN 63
QHS+ QS ++ P G+
Sbjct: 39 QHSHLPPQSEEMMPHSGS 56
>UNIPROTKB|P22736 [details] [associations]
symbol:NR4A1 "Nuclear receptor subfamily 4 group A member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0043154
"negative regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=TAS] [GO:0008543 "fibroblast
growth factor receptor signaling pathway" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0048011 "neurotrophin TRK
receptor signaling pathway" evidence=TAS] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0035924 "cellular response to
vascular endothelial growth factor stimulus" evidence=IMP]
[GO:0001938 "positive regulation of endothelial cell proliferation"
evidence=IMP] [GO:0044344 "cellular response to fibroblast growth
factor stimulus" evidence=IMP] [GO:0035767 "endothelial cell
chemotaxis" evidence=IMP] [GO:0002042 "cell migration involved in
sprouting angiogenesis" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003071
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01285
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:nfat_3pathway Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0007173
GO:GO:0008543 GO:GO:0048011 GO:GO:0043154 GO:GO:0005654
GO:GO:0006917 GO:GO:0046872 GO:GO:0003677 GO:GO:0001938
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
Pathway_Interaction_DB:rxr_vdr_pathway EMBL:CH471111 GO:GO:0005667
GO:GO:0001077 EMBL:AC025259 GO:GO:0048015 GO:GO:0006367
GO:GO:0002042 GO:GO:0035924 GO:GO:0035767 eggNOG:NOG245120 CTD:3164
HOGENOM:HOG000230925 HOVERGEN:HBG052663 KO:K04465 OrthoDB:EOG4VMFF7
EMBL:D49728 EMBL:L13740 EMBL:AK297526 EMBL:BC016147 IPI:IPI00743108
IPI:IPI01011914 PIR:A37251 RefSeq:NP_001189162.1 RefSeq:NP_002126.2
RefSeq:NP_775180.1 UniGene:Hs.524430 UniGene:Hs.670088 PDB:2QW4
PDB:3V3E PDB:3V3Q PDBsum:2QW4 PDBsum:3V3E PDBsum:3V3Q
ProteinModelPortal:P22736 SMR:P22736 IntAct:P22736
MINT:MINT-2859679 STRING:P22736 PhosphoSite:P22736 DMDM:127819
PRIDE:P22736 DNASU:3164 Ensembl:ENST00000243050
Ensembl:ENST00000360284 Ensembl:ENST00000394824
Ensembl:ENST00000394825 Ensembl:ENST00000550082 GeneID:3164
KEGG:hsa:3164 UCSC:uc001rzs.3 GeneCards:GC12P052416
H-InvDB:HIX0171621 HGNC:HGNC:7980 MIM:139139 neXtProt:NX_P22736
PharmGKB:PA31761 InParanoid:P22736 PhylomeDB:P22736
BindingDB:P22736 ChEMBL:CHEMBL1293229 ChiTaRS:NR4A1
EvolutionaryTrace:P22736 GenomeRNAi:3164 NextBio:12546
ArrayExpress:P22736 Bgee:P22736 CleanEx:HS_NR4A1
Genevestigator:P22736 GermOnline:ENSG00000123358 Uniprot:P22736
Length = 598
Score = 273 (101.2 bits), Expect = 5.9e-23, P = 5.9e-23
Identities = 58/111 (52%), Positives = 66/111 (59%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ L +GI P TST A + P EG C VCGD S HYG+ TCE
Sbjct: 231 PGLAPTSPHLEGSGILDTPV-TSTKARSGA-PGGSEG---RCAVCGDNASCQHYGVRTCE 285
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 286 GCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 336
>UNIPROTKB|F8W6I3 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
EMBL:AC074099 HGNC:HGNC:7981 ChiTaRS:NR4A2 IPI:IPI00917128
ProteinModelPortal:F8W6I3 SMR:F8W6I3 Ensembl:ENST00000409108
ArrayExpress:F8W6I3 Bgee:F8W6I3 Uniprot:F8W6I3
Length = 553
Score = 259 (96.2 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 49/94 (52%), Positives = 58/94 (61%)
Query: 109 HTSTIAAT--PEHPDTKEGIEE-LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H S + T P P E LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 239 HASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV 298
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 299 CLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEV 332
Score = 35 (17.4 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 QHSNNDTQSSQLSPMLGN 63
QHS+ QS ++ P G+
Sbjct: 102 QHSHLPPQSEEMMPHSGS 119
>UNIPROTKB|F5GXF0 [details] [associations]
symbol:NR4A1 "Nuclear receptor subfamily 4 group A member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003071 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01285 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:AC025259 GO:GO:0030522 OMA:KWAEKIP HGNC:HGNC:7980
ChiTaRS:NR4A1 IPI:IPI00027454 ProteinModelPortal:F5GXF0 SMR:F5GXF0
PRIDE:F5GXF0 Ensembl:ENST00000545748 ArrayExpress:F5GXF0
Bgee:F5GXF0 Uniprot:F5GXF0
Length = 652
Score = 273 (101.2 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 58/111 (52%), Positives = 66/111 (59%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ L +GI P TST A + P EG C VCGD S HYG+ TCE
Sbjct: 285 PGLAPTSPHLEGSGILDTPV-TSTKARSGA-PGGSEG---RCAVCGDNASCQHYGVRTCE 339
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 340 GCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 390
>UNIPROTKB|E2R2V0 [details] [associations]
symbol:RARA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071391 "cellular response to estrogen
stimulus" evidence=IEA] [GO:0071300 "cellular response to retinoic
acid" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0061037 "negative regulation
of cartilage development" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0051099 "positive
regulation of binding" evidence=IEA] [GO:0051018 "protein kinase A
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0043422 "protein
kinase B binding" evidence=IEA] [GO:0043277 "apoptotic cell
clearance" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032754 "positive regulation of interleukin-5
production" evidence=IEA] [GO:0032753 "positive regulation of
interleukin-4 production" evidence=IEA] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=IEA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=IEA] [GO:0032355 "response to estradiol
stimulus" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0003714 GO:GO:0032689 GO:GO:0032355 GO:GO:0046872
GO:GO:0045947 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0006468 GO:GO:0007283 GO:GO:0071222 GO:GO:0000122
GO:GO:0000790 GO:GO:0003713 GO:GO:0032720 GO:GO:0007281
GO:GO:0035264 GO:GO:0030853 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
GO:GO:0001972 GO:GO:0060591 GO:GO:0003708 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
GeneTree:ENSGT00680000099662 OMA:RTENVCI GO:GO:0060010
EMBL:AAEX03006463 EMBL:AAEX03006464 EMBL:AAEX03006465
Ensembl:ENSCAFT00000035664 Uniprot:E2R2V0
Length = 486
Score = 252 (93.8 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 50/111 (45%), Positives = 66/111 (59%)
Query: 91 GGSTNMDLS-SAGISYHPFHTST--IAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
G +T + S S G + +S+ I +P P I + C VC DK SGYHYG+ C
Sbjct: 70 GFATTTEWSPSLGFAIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSAC 129
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
E CKGFF+R++Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 130 EGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 180
Score = 38 (18.4 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 79 MVDNSYLFQSPGGGSTN 95
M NS +PGGG N
Sbjct: 1 MASNSSSCPTPGGGHLN 17
>UNIPROTKB|Q08E53 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9913 "Bos taurus" [GO:0071542 "dopaminergic neuron
differentiation" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0043085
"positive regulation of catalytic activity" evidence=IEA]
[GO:0042551 "neuron maturation" evidence=IEA] [GO:0042416 "dopamine
biosynthetic process" evidence=IEA] [GO:0042053 "regulation of
dopamine metabolic process" evidence=IEA] [GO:0033554 "cellular
response to stress" evidence=IEA] [GO:0031668 "cellular response to
extracellular stimulus" evidence=IEA] [GO:0021986 "habenula
development" evidence=IEA] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=IEA] [GO:0016265 "death"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0043085 GO:GO:0001764 GO:GO:0033554 GO:GO:0046872
GO:GO:0071542 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0001666 GO:GO:0045944 GO:GO:0008344 GO:GO:0001975
GO:GO:0043524 GO:GO:0006351 GO:GO:0009791 GO:GO:0042416
GO:GO:0021952 GO:GO:0042053 GO:GO:0016265 GO:GO:0030522
GO:GO:0043576 GO:GO:0042551 eggNOG:NOG245120 KO:K08558
GeneTree:ENSGT00640000091364 GO:GO:0021986 HOGENOM:HOG000230925
HOVERGEN:HBG052663 EMBL:BC123415 IPI:IPI00708375
RefSeq:NP_001069676.1 UniGene:Bt.25332 ProteinModelPortal:Q08E53
SMR:Q08E53 STRING:Q08E53 Ensembl:ENSBTAT00000004758 GeneID:540245
KEGG:bta:540245 CTD:4929 InParanoid:Q08E53 OMA:MWEDPGS
OrthoDB:EOG40CHGK NextBio:20878513 Uniprot:Q08E53
Length = 598
Score = 259 (96.2 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 49/94 (52%), Positives = 58/94 (61%)
Query: 109 HTSTIAAT--PEHPDTKEGIEE-LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H S + T P P E LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 239 HASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV 298
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 299 CLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEV 332
Score = 35 (17.4 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 QHSNNDTQSSQLSPMLGN 63
QHS+ QS ++ P G+
Sbjct: 102 QHSHLPPQSEEMMPHSGS 119
>UNIPROTKB|P43354 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001975 "response
to amphetamine" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0010035 "response to
inorganic substance" evidence=IEA] [GO:0016265 "death"
evidence=IEA] [GO:0017085 "response to insecticide" evidence=IEA]
[GO:0021952 "central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0021986 "habenula development" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0042053
"regulation of dopamine metabolic process" evidence=IEA]
[GO:0042416 "dopamine biosynthetic process" evidence=IEA]
[GO:0042551 "neuron maturation" evidence=IEA] [GO:0043085 "positive
regulation of catalytic activity" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043576 "regulation of respiratory gaseous exchange"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IDA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=ISS] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0031668 "cellular response to extracellular stimulus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003073
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005737 GO:GO:0043085 GO:GO:0001764 GO:GO:0005654
GO:GO:0033554 GO:GO:0046872 GO:GO:0071542 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944
GO:GO:0008344 GO:GO:0001975 GO:GO:0043524 GO:GO:0031668
GO:GO:0009791 GO:GO:0010035 GO:GO:0042416 EMBL:CH471058
GO:GO:0021952 GO:GO:0042053 GO:GO:0016265 GO:GO:0006367
GO:GO:0043576 Orphanet:2828 GO:GO:0017085 GO:GO:0042551
eggNOG:NOG245120 KO:K08558 GO:GO:0021986 HOVERGEN:HBG052663
CTD:4929 OrthoDB:EOG40CHGK EMBL:X75918 EMBL:AB017586 EMBL:AB019433
EMBL:AC074099 EMBL:BC009288 EMBL:S77154 IPI:IPI01013823 PIR:A57040
RefSeq:NP_006177.1 UniGene:Hs.563344 PDB:1OVL PDBsum:1OVL
ProteinModelPortal:P43354 SMR:P43354 IntAct:P43354 STRING:P43354
PhosphoSite:P43354 DMDM:1171750 PRIDE:P43354 DNASU:4929
Ensembl:ENST00000339562 Ensembl:ENST00000409572 GeneID:4929
KEGG:hsa:4929 UCSC:uc002tyx.4 GeneCards:GC02M157180 HGNC:HGNC:7981
HPA:CAB010481 HPA:HPA000543 MIM:601828 neXtProt:NX_P43354
PharmGKB:PA31762 InParanoid:P43354 PhylomeDB:P43354
ChEMBL:CHEMBL5002 ChiTaRS:NR4A2 EvolutionaryTrace:P43354
GenomeRNAi:4929 NextBio:18989 ArrayExpress:P43354 Bgee:P43354
CleanEx:HS_NR4A2 Genevestigator:P43354 GermOnline:ENSG00000153234
Uniprot:P43354
Length = 598
Score = 259 (96.2 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 49/94 (52%), Positives = 58/94 (61%)
Query: 109 HTSTIAAT--PEHPDTKEGIEE-LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H S + T P P E LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 239 HASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV 298
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 299 CLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEV 332
Score = 35 (17.4 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 QHSNNDTQSSQLSPMLGN 63
QHS+ QS ++ P G+
Sbjct: 102 QHSHLPPQSEEMMPHSGS 119
>UNIPROTKB|F1RPU1 [details] [associations]
symbol:NR4A2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043085 "positive regulation of catalytic
activity" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0042416 "dopamine biosynthetic process"
evidence=IEA] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0031668 "cellular response to extracellular
stimulus" evidence=IEA] [GO:0021986 "habenula development"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001975 "response to amphetamine" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001666 "response
to hypoxia" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0043085 GO:GO:0001764 GO:GO:0033554 GO:GO:0046872
GO:GO:0071542 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0001666 GO:GO:0045944 GO:GO:0008344 GO:GO:0001975
GO:GO:0043524 GO:GO:0009791 GO:GO:0042416 GO:GO:0021952
GO:GO:0042053 GO:GO:0016265 GO:GO:0030522 GO:GO:0043576
GO:GO:0042551 GeneTree:ENSGT00640000091364 GO:GO:0021986
OMA:MWEDPGS EMBL:CU463810 EMBL:HQ738304 Ensembl:ENSSSCT00000017282
Uniprot:F1RPU1
Length = 598
Score = 259 (96.2 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 49/94 (52%), Positives = 58/94 (61%)
Query: 109 HTSTIAAT--PEHPDTKEGIEE-LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H S + T P P E LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 239 HASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV 298
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 299 CLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEV 332
Score = 35 (17.4 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 QHSNNDTQSSQLSPMLGN 63
QHS+ QS ++ P G+
Sbjct: 102 QHSHLPPQSEEMMPHSGS 119
>UNIPROTKB|Q5R5Y4 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=ISS]
[GO:0071542 "dopaminergic neuron differentiation" evidence=ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0071542 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0006351 GO:GO:0030522 HOGENOM:HOG000230925
HOVERGEN:HBG052663 EMBL:CR860717 UniGene:Pab.19568 HSSP:P43354
ProteinModelPortal:Q5R5Y4 SMR:Q5R5Y4 InParanoid:Q5R5Y4
Uniprot:Q5R5Y4
Length = 598
Score = 259 (96.2 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 49/94 (52%), Positives = 58/94 (61%)
Query: 109 HTSTIAAT--PEHPDTKEGIEE-LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H S + T P P E LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 239 HASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV 298
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 299 CLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEV 332
Score = 35 (17.4 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 QHSNNDTQSSQLSPMLGN 63
QHS+ QS ++ P G+
Sbjct: 102 QHSHLPPQSEEMMPHSGS 119
>MGI|MGI:1352456 [details] [associations]
symbol:Nr4a2 "nuclear receptor subfamily 4, group A, member
2" species:10090 "Mus musculus" [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001975 "response to amphetamine" evidence=IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IMP] [GO:0006950
"response to stress" evidence=IMP] [GO:0007399 "nervous system
development" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IMP]
[GO:0009791 "post-embryonic development" evidence=IMP] [GO:0010035
"response to inorganic substance" evidence=ISO] [GO:0010467 "gene
expression" evidence=IMP] [GO:0016265 "death" evidence=IMP]
[GO:0017085 "response to insecticide" evidence=ISO] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0021953 "central nervous system neuron
differentiation" evidence=IMP] [GO:0021986 "habenula development"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] [GO:0031668 "cellular response to extracellular
stimulus" evidence=ISO;IDA] [GO:0033554 "cellular response to
stress" evidence=IMP] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IDA] [GO:0042416 "dopamine biosynthetic process"
evidence=IMP] [GO:0042417 "dopamine metabolic process"
evidence=IMP] [GO:0042551 "neuron maturation" evidence=IMP]
[GO:0043085 "positive regulation of catalytic activity"
evidence=IMP] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IDA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352456
GO:GO:0005634 GO:GO:0005737 GO:GO:0043085 GO:GO:0001764
GO:GO:0033554 GO:GO:0046872 GO:GO:0071542 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944
GO:GO:0008344 GO:GO:0001975 GO:GO:0043524 GO:GO:0031668
GO:GO:0009791 GO:GO:0010035 GO:GO:0042416 GO:GO:0021952
GO:GO:0042053 GO:GO:0016265 GO:GO:0043576 GO:GO:0017085
GO:GO:0042551 eggNOG:NOG245120 KO:K08558 GO:GO:0021986
HOGENOM:HOG000230925 HOVERGEN:HBG052663 CTD:4929 OMA:MWEDPGS
OrthoDB:EOG40CHGK ChiTaRS:NR4A2 EMBL:S53744 EMBL:U86783
IPI:IPI00112726 IPI:IPI00230431 PIR:A46225 RefSeq:NP_001132981.1
RefSeq:NP_038641.1 UniGene:Mm.3507 ProteinModelPortal:Q06219
SMR:Q06219 IntAct:Q06219 STRING:Q06219 PhosphoSite:Q06219
PRIDE:Q06219 Ensembl:ENSMUST00000028166 Ensembl:ENSMUST00000112629
GeneID:18227 KEGG:mmu:18227 UCSC:uc012bvn.1 InParanoid:Q06219
NextBio:293656 Bgee:Q06219 CleanEx:MM_NR4A2 Genevestigator:Q06219
GermOnline:ENSMUSG00000026826 Uniprot:Q06219
Length = 598
Score = 259 (96.2 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 49/94 (52%), Positives = 58/94 (61%)
Query: 109 HTSTIAAT--PEHPDTKEGIEE-LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H S + T P P E LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 239 HASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV 298
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 299 CLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEV 332
Score = 35 (17.4 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 QHSNNDTQSSQLSPMLGN 63
QHS+ QS ++ P G+
Sbjct: 102 QHSHLPPQSEEMMPHSGS 119
>RGD|3202 [details] [associations]
symbol:Nr4a2 "nuclear receptor subfamily 4, group A, member 2"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEA;ISO] [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0001975 "response to amphetamine" evidence=IEA;ISO] [GO:0003677
"DNA binding" evidence=ISO;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA;TAS] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006950 "response to
stress" evidence=ISO] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA;ISO] [GO:0009791
"post-embryonic development" evidence=IEA;ISO] [GO:0010035 "response
to inorganic substance" evidence=IDA] [GO:0010467 "gene expression"
evidence=ISO] [GO:0016265 "death" evidence=IEA;ISO] [GO:0017085
"response to insecticide" evidence=IDA] [GO:0021952 "central nervous
system projection neuron axonogenesis" evidence=IEA;ISO] [GO:0021953
"central nervous system neuron differentiation" evidence=ISO]
[GO:0021986 "habenula development" evidence=IEA;ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=TAS] [GO:0031668
"cellular response to extracellular stimulus" evidence=IEA;ISO]
[GO:0033554 "cellular response to stress" evidence=IEA;ISO]
[GO:0042053 "regulation of dopamine metabolic process"
evidence=IEA;ISO] [GO:0042416 "dopamine biosynthetic process"
evidence=IEA;ISO] [GO:0042417 "dopamine metabolic process"
evidence=ISO] [GO:0042551 "neuron maturation" evidence=IEA;ISO]
[GO:0043085 "positive regulation of catalytic activity"
evidence=IEA;ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO;IDA] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IEA;ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0071542 "dopaminergic neuron
differentiation" evidence=ISO;ISS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003073 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284
PRINTS:PR01287 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:3202 GO:GO:0005634 GO:GO:0005737 GO:GO:0043085
GO:GO:0001764 GO:GO:0033554 GO:GO:0046872 GO:GO:0071542 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944
GO:GO:0008344 GO:GO:0001975 GO:GO:0043524 GO:GO:0009791 GO:GO:0010035
GO:GO:0042416 GO:GO:0021952 GO:GO:0042053 GO:GO:0016265 GO:GO:0043576
GO:GO:0017085 GO:GO:0042551 eggNOG:NOG245120 KO:K08558
GeneTree:ENSGT00640000091364 GO:GO:0021986 HOGENOM:HOG000230925
HOVERGEN:HBG052663 CTD:4929 OrthoDB:EOG40CHGK EMBL:U01146 EMBL:L08595
EMBL:U72345 IPI:IPI00325635 PIR:I84692 RefSeq:NP_062201.2
UniGene:Rn.88129 ProteinModelPortal:Q07917 SMR:Q07917 STRING:Q07917
PhosphoSite:Q07917 PRIDE:Q07917 Ensembl:ENSRNOT00000041394
GeneID:54278 KEGG:rno:54278 InParanoid:Q07917 NextBio:610844
ArrayExpress:Q07917 Genevestigator:Q07917
GermOnline:ENSRNOG00000005600 Uniprot:Q07917
Length = 598
Score = 259 (96.2 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 49/94 (52%), Positives = 58/94 (61%)
Query: 109 HTSTIAAT--PEHPDTKEGIEE-LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H S + T P P E LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 239 HASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV 298
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 299 CLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEV 332
Score = 35 (17.4 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 QHSNNDTQSSQLSPMLGN 63
QHS+ QS ++ P G+
Sbjct: 102 QHSHLPPQSEEMMPHSGS 119
>RGD|620029 [details] [associations]
symbol:Nr4a1 "nuclear receptor subfamily 4, group A, member 1"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA;ISO] [GO:0001938 "positive regulation
of endothelial cell proliferation" evidence=IEA;ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0006915 "apoptotic process"
evidence=ISO] [GO:0006917 "induction of apoptosis"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0035767 "endothelial cell chemotaxis" evidence=IEA;ISO]
[GO:0035914 "skeletal muscle cell differentiation" evidence=ISO]
[GO:0035924 "cellular response to vascular endothelial growth
factor stimulus" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0044344 "cellular response to
fibroblast growth factor stimulus" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0071310
"cellular response to organic substance" evidence=ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003071 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01285 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:620029
GO:GO:0005634 GO:GO:0043154 GO:GO:0006917 GO:GO:0044344
GO:GO:0046872 GO:GO:0001938 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0005667 GO:GO:0001077 GO:GO:0030522
GO:GO:0002042 GO:GO:0035924 GO:GO:0035767 eggNOG:NOG245120
GeneTree:ENSGT00640000091364 CTD:3164 HOGENOM:HOG000230925
HOVERGEN:HBG052663 KO:K04465 OMA:KWAEKIP OrthoDB:EOG4VMFF7
EMBL:U17254 EMBL:BC097313 IPI:IPI00211154 PIR:JQ0623
RefSeq:NP_077364.2 UniGene:Rn.10000 PDB:1CIT PDB:1YJE PDBsum:1CIT
PDBsum:1YJE ProteinModelPortal:P22829 SMR:P22829 STRING:P22829
PhosphoSite:P22829 PRIDE:P22829 Ensembl:ENSRNOT00000010171
GeneID:79240 KEGG:rno:79240 InParanoid:P22829
EvolutionaryTrace:P22829 NextBio:614676 Genevestigator:P22829
GermOnline:ENSRNOG00000007607 Uniprot:P22829
Length = 597
Score = 271 (100.5 bits), Expect = 9.7e-23, P = 9.7e-23
Identities = 56/111 (50%), Positives = 67/111 (60%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ + ++GI P TST A + + G E C VCGD S HYG+ TCE
Sbjct: 230 PGLAPTSPNCDTSGILDAPV-TSTKARS----GSSGGSEGRCAVCGDNASCQHYGVRTCE 284
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 285 GCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 335
>FB|FBgn0003964 [details] [associations]
symbol:usp "ultraspiracle" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0004884 "ecdysteroid hormone receptor activity"
evidence=NAS;IDA;IPI] [GO:0008232 "activator ecdysone receptor
complex" evidence=IDA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IDA;IPI] [GO:0008230
"ecdysone receptor holocomplex" evidence=TAS;IPI] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IPI] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS;NAS] [GO:0003677 "DNA binding" evidence=IDA;NAS]
[GO:0007552 "metamorphosis" evidence=NAS] [GO:0045596 "negative
regulation of cell differentiation" evidence=TAS] [GO:0005700
"polytene chromosome" evidence=NAS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0035072
"ecdysone-mediated induction of salivary gland cell autophagic cell
death" evidence=NAS] [GO:0008289 "lipid binding" evidence=IDA]
[GO:0040034 "regulation of development, heterochronic"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005500 "juvenile hormone binding" evidence=TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0048813 "dendrite morphogenesis"
evidence=IMP;NAS] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0030425
"dendrite" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0035075 "response to ecdysone" evidence=IMP]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0045892 GO:GO:0045893 GO:GO:0042803
GO:GO:0046872 GO:GO:0030425 EMBL:AE014298 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0016322 GO:GO:0007298 GO:GO:0048813
GO:GO:0007517 EMBL:AL031765 GO:GO:0007281 GO:GO:0046982
GO:GO:0040034 GO:GO:0005700 GO:GO:0035072 PDB:1R0O PDB:2HAN
PDBsum:1R0O PDBsum:2HAN GO:GO:0004884 GO:GO:0045596
GeneTree:ENSGT00690000101777 EMBL:X53417 EMBL:X52591 EMBL:AY069393
EMBL:X53379 PIR:A35872 PIR:T13737 RefSeq:NP_476781.1 UniGene:Dm.25
PDB:1HG4 PDBsum:1HG4 ProteinModelPortal:P20153 SMR:P20153
DIP:DIP-645N IntAct:P20153 MINT:MINT-824030 STRING:P20153
PaxDb:P20153 PRIDE:P20153 EnsemblMetazoa:FBtr0070346
EnsemblMetazoa:FBtr0333803 GeneID:31165 KEGG:dme:Dmel_CG4380
CTD:31165 FlyBase:FBgn0003964 InParanoid:P20153 KO:K14030
OMA:MGDSRDS OrthoDB:EOG45HQD3 PhylomeDB:P20153
EvolutionaryTrace:P20153 GenomeRNAi:31165 NextBio:772247
Bgee:P20153 GermOnline:CG4380 GO:GO:0008230 GO:GO:0005500
Uniprot:P20153
Length = 508
Score = 269 (99.8 bits), Expect = 9.9e-23, P = 9.9e-23
Identities = 57/129 (44%), Positives = 72/129 (55%)
Query: 89 PGGGSTNMDLSSAG---ISYHPFHTSTIAAT-------PEHPDTKEGIEELCPVCGDKVS 138
PG S + + +SAG ++ P AA P HP G + LC +CGD+ S
Sbjct: 55 PGSNSASSNNNSAGDAQMAQAPNSAGGSAAAAVQQQYPPNHP--LSGSKHLCSICGDRAS 112
Query: 139 GYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
G HYG+ +CE CKGFFKRTV+ Y C R+C IDK QR RC +CR+QKCL GMK E
Sbjct: 113 GKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDKRQRNRCQYCRYQKCLTCGMKRE 172
Query: 199 -VSSQSTHG 206
V + G
Sbjct: 173 AVQEERQRG 181
>MGI|MGI:97856 [details] [associations]
symbol:Rara "retinoic acid receptor, alpha" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI;IDA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000900 "translation repressor
activity, nucleic acid binding" evidence=ISO] [GO:0001657 "ureteric
bud development" evidence=IMP] [GO:0001972 "retinoic acid binding"
evidence=ISO] [GO:0003417 "growth plate cartilage development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IDA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0006468 "protein phosphorylation" evidence=ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=ISO;IPI] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO;IGI] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0008584 "male gonad development" evidence=ISO] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0010629
"negative regulation of gene expression" evidence=IGI] [GO:0017148
"negative regulation of translation" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO;IDA]
[GO:0030520 "intracellular estrogen receptor signaling pathway"
evidence=ISO] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IDA] [GO:0030852 "regulation of
granulocyte differentiation" evidence=IMP] [GO:0030853 "negative
regulation of granulocyte differentiation" evidence=ISO]
[GO:0031490 "chromatin DNA binding" evidence=ISO] [GO:0031641
"regulation of myelination" evidence=ISO] [GO:0032355 "response to
estradiol stimulus" evidence=ISO] [GO:0032526 "response to retinoic
acid" evidence=ISO;IMP] [GO:0032689 "negative regulation of
interferon-gamma production" evidence=ISO] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=ISO]
[GO:0032736 "positive regulation of interleukin-13 production"
evidence=ISO] [GO:0032753 "positive regulation of interleukin-4
production" evidence=ISO] [GO:0032754 "positive regulation of
interleukin-5 production" evidence=ISO] [GO:0035264 "multicellular
organism growth" evidence=IGI] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043277 "apoptotic cell clearance" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IGI;IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IMP]
[GO:0044323 "retinoic acid-responsive element binding"
evidence=ISO] [GO:0045471 "response to ethanol" evidence=ISO]
[GO:0045596 "negative regulation of cell differentiation"
evidence=IMP] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=ISO] [GO:0045666 "positive regulation of
neuron differentiation" evidence=ISO] [GO:0045787 "positive
regulation of cell cycle" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IGI] [GO:0045947
"negative regulation of translational initiation" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048027 "mRNA 5'-UTR
binding" evidence=ISO] [GO:0048167 "regulation of synaptic
plasticity" evidence=ISO] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO;IDA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051018 "protein kinase A
binding" evidence=ISO] [GO:0051099 "positive regulation of binding"
evidence=ISO] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IMP] [GO:0060010 "Sertoli cell fate
commitment" evidence=IMP] [GO:0060591 "chondroblast
differentiation" evidence=IMP] [GO:0061037 "negative regulation of
cartilage development" evidence=IMP] [GO:0071222 "cellular response
to lipopolysaccharide" evidence=IDA] [GO:0071300 "cellular response
to retinoic acid" evidence=ISO] [GO:0071391 "cellular response to
estrogen stimulus" evidence=ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:97856
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0032689 GO:GO:0032355 GO:GO:0046872 GO:GO:0045947
GO:GO:0008284 GO:GO:0043025 GO:GO:0030425 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944 GO:GO:0006468
GO:GO:0007283 GO:GO:0071222 GO:GO:0000122 GO:GO:0044212
GO:GO:0000790 GO:GO:0003713 GO:GO:0032526 GO:GO:0032720
GO:GO:0007281 GO:GO:0035264 GO:GO:0030853 GO:GO:0010628
GO:GO:0051099 GO:GO:0031490 GO:GO:0001657 GO:GO:0030520
GO:GO:0045787 GO:GO:0071391 GO:GO:0043277 GO:GO:0032753
GO:GO:0045630 GO:GO:0003417 HOVERGEN:HBG005606 GO:GO:0001972
GO:GO:0060591 GO:GO:0003708 GO:GO:0045596 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
eggNOG:NOG297448 GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312
KO:K08527 OMA:RTENVCI OrthoDB:EOG4F7NK7 CTD:5914 GO:GO:0060010
EMBL:X56572 EMBL:X56565 EMBL:S56656 EMBL:X57528 EMBL:M60909
EMBL:BC010216 IPI:IPI00114447 IPI:IPI00223075 PIR:S05050
RefSeq:NP_001169999.1 RefSeq:NP_001170773.1 RefSeq:NP_001170774.1
RefSeq:NP_033050.2 UniGene:Mm.439744 ProteinModelPortal:P11416
SMR:P11416 DIP:DIP-31480N IntAct:P11416 MINT:MINT-5210296
STRING:P11416 PhosphoSite:P11416 PRIDE:P11416
Ensembl:ENSMUST00000068133 Ensembl:ENSMUST00000107473
Ensembl:ENSMUST00000107474 Ensembl:ENSMUST00000107475
Ensembl:ENSMUST00000164748 GeneID:19401 KEGG:mmu:19401
UCSC:uc007lhz.2 InParanoid:P11416 BindingDB:P11416
ChEMBL:CHEMBL2792 NextBio:296513 Bgee:P11416 CleanEx:MM_RARA
Genevestigator:P11416 GermOnline:ENSMUSG00000037992 GO:GO:0030852
Uniprot:P11416
Length = 462
Score = 250 (93.1 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 46/100 (46%), Positives = 59/100 (59%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
S A I + I +P P I + C VC DK SGYHYG+ CE CKGFF+R++
Sbjct: 57 SPATIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSI 116
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
Q VYTC +++C I+K R RC +CR QKC +VGM E
Sbjct: 117 QKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFDVGMSKE 156
Score = 38 (18.4 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 79 MVDNSYLFQSPGGGSTN 95
M NS +PGGG N
Sbjct: 1 MASNSSSCPTPGGGHLN 17
>UNIPROTKB|E2RBX8 [details] [associations]
symbol:NR4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043085 "positive regulation of catalytic
activity" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0042416 "dopamine biosynthetic process"
evidence=IEA] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0031668 "cellular response to extracellular
stimulus" evidence=IEA] [GO:0021986 "habenula development"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001975 "response to amphetamine" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001666 "response
to hypoxia" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0043085 GO:GO:0001764 GO:GO:0033554 GO:GO:0046872
GO:GO:0071542 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0001666 GO:GO:0045944 GO:GO:0008344 GO:GO:0001975
GO:GO:0043524 GO:GO:0009791 GO:GO:0042416 GO:GO:0021952
GO:GO:0042053 GO:GO:0016265 GO:GO:0030522 GO:GO:0043576
GO:GO:0042551 GeneTree:ENSGT00640000091364 GO:GO:0021986
OMA:MWEDPGS EMBL:AAEX03017669 Ensembl:ENSCAFT00000014654
NextBio:20854035 Uniprot:E2RBX8
Length = 609
Score = 259 (96.2 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 49/94 (52%), Positives = 58/94 (61%)
Query: 109 HTSTIAAT--PEHPDTKEGIEE-LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H S + T P P E LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 250 HASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV 309
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 310 CLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEV 343
Score = 35 (17.4 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 QHSNNDTQSSQLSPMLGN 63
QHS+ QS ++ P G+
Sbjct: 113 QHSHLPPQSEEMMPHSGS 130
>UNIPROTKB|F5H4G9 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 OMA:MWEDPGS EMBL:AC074099 HGNC:HGNC:7981
ChiTaRS:NR4A2 IPI:IPI00018033 ProteinModelPortal:F5H4G9 SMR:F5H4G9
Ensembl:ENST00000539077 ArrayExpress:F5H4G9 Bgee:F5H4G9
Uniprot:F5H4G9
Length = 609
Score = 259 (96.2 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 49/94 (52%), Positives = 58/94 (61%)
Query: 109 HTSTIAAT--PEHPDTKEGIEE-LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H S + T P P E LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 250 HASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYV 309
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 310 CLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEV 343
Score = 35 (17.4 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 46 QHSNNDTQSSQLSPMLGN 63
QHS+ QS ++ P G+
Sbjct: 113 QHSHLPPQSEEMMPHSGS 130
>UNIPROTKB|O97727 [details] [associations]
symbol:NOR-1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR001628
InterPro:IPR003070 InterPro:IPR003072 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR01284
PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
GO:GO:0030522 GeneTree:ENSGT00640000091364 HOGENOM:HOG000230925
HOVERGEN:HBG052663 HSSP:P43354 EMBL:CU302447 EMBL:CU210903
UniGene:Ssc.761 EMBL:AJ011768 SMR:O97727 STRING:O97727
Ensembl:ENSSSCT00000005926 Uniprot:O97727
Length = 446
Score = 265 (98.3 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 51/106 (48%), Positives = 64/106 (60%)
Query: 99 SSAGISYHPFHTSTIAATPEHPD-----TKEGIEELCPVCGDKVSGYHYGLLTCESCKGF 153
S G++ P +S + +P P T G E C VCGD + HYG+ TCE CKGF
Sbjct: 274 SPLGLTTSPTTSSLLGESPSLPSPPNRSTASG-EGTCAVCGDNAACQHYGVRTCEGCKGF 332
Query: 154 FKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
FKRTVQ Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 333 FKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEV 378
>UNIPROTKB|B3KY83 [details] [associations]
symbol:RXRA "cDNA FLJ16020 fis, clone BRAMY2003287, highly
similar to RETINOIC ACID RECEPTOR RXR-ALPHA" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=IEA] [GO:0060687 "regulation
of branching involved in prostate gland morphogenesis"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008285
GO:GO:0032869 GO:GO:0045471 GO:GO:0046872 GO:GO:0007568
GO:GO:0030424 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006954
GO:GO:0045944 GO:GO:0051384 GO:GO:0007565 GO:GO:0001889
GO:GO:0007494 GO:GO:0044212 GO:GO:0043065 GO:GO:0032526
GO:GO:0003690 GO:GO:0001890 GO:GO:0033189 GO:GO:0010269
GO:GO:0031490 GO:GO:0033280 GO:GO:0031103 GO:GO:0060038
GO:GO:0055010 GO:GO:0060687 HOVERGEN:HBG005606 GO:GO:0060528
GO:GO:0055012 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
EMBL:AC156789 EMBL:AL354796 EMBL:AL669970 EMBL:AL683798
UniGene:Hs.590886 HGNC:HGNC:10477 EMBL:AK131192 IPI:IPI01011260
SMR:B3KY83 STRING:B3KY83 Ensembl:ENST00000540193 Uniprot:B3KY83
Length = 365
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 47/103 (45%), Positives = 61/103 (59%)
Query: 107 PFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
P + + P HP + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ Y
Sbjct: 13 PLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTY 72
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
TC + C IDK QR RC +CR+QKCL +GMK E V + G
Sbjct: 73 TCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRG 115
>MGI|MGI:1352454 [details] [associations]
symbol:Nr4a1 "nuclear receptor subfamily 4, group A, member
1" species:10090 "Mus musculus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0001938 "positive regulation of
endothelial cell proliferation" evidence=ISO] [GO:0002042 "cell
migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IMP] [GO:0006917 "induction of apoptosis"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010035 "response to inorganic substance" evidence=ISA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=IEA] [GO:0035767 "endothelial cell chemotaxis"
evidence=ISO] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IMP] [GO:0035924 "cellular response to vascular
endothelial growth factor stimulus" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=IDA] [GO:0043154
"negative regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IDA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0044344 "cellular
response to fibroblast growth factor stimulus" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0071310 "cellular
response to organic substance" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003071 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01285 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1352454 GO:GO:0043154
GO:GO:0042803 GO:GO:0006917 GO:GO:0044344 GO:GO:0046872
GO:GO:0001938 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0005667 GO:GO:0001077 GO:GO:0010035 GO:GO:0030522
GO:GO:0035914 GO:GO:0071310 GO:GO:0002042 GO:GO:0035924
GO:GO:0035767 eggNOG:NOG245120 CTD:3164 HOGENOM:HOG000230925
HOVERGEN:HBG052663 KO:K04465 OMA:KWAEKIP OrthoDB:EOG4VMFF7
EMBL:J04113 EMBL:X16995 EMBL:X60132 EMBL:BC004770 IPI:IPI00121733
PIR:S06953 RefSeq:NP_034574.1 UniGene:Mm.119
ProteinModelPortal:P12813 SMR:P12813 STRING:P12813
PhosphoSite:P12813 PRIDE:P12813 Ensembl:ENSMUST00000023779
GeneID:15370 KEGG:mmu:15370 InParanoid:P12813 NextBio:288006
Bgee:P12813 CleanEx:MM_NR4A1 Genevestigator:P12813
GermOnline:ENSMUSG00000023034 Uniprot:P12813
Length = 601
Score = 269 (99.8 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 53/111 (47%), Positives = 64/111 (57%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ + ++GI P + +T G E C VCGD S HYG+ TCE
Sbjct: 234 PGLAPTSPNRDTSGILDAP-----VTSTKSRSGASGGSEGRCAVCGDNASCQHYGVRTCE 288
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 289 GCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 339
>FB|FBgn0014859 [details] [associations]
symbol:Hr38 "Hormone receptor-like in 38" species:7227
"Drosophila melanogaster" [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS] [GO:0005634
"nucleus" evidence=IEA;NAS] [GO:0008544 "epidermis development"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=IEA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0042335 "cuticle development" evidence=IMP]
[GO:0048082 "regulation of adult chitin-containing cuticle
pigmentation" evidence=IGI] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0006911 EMBL:AE014134 GO:GO:0046872
GO:GO:0004879 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0042335 GO:GO:0000977
GO:GO:0048082 EMBL:X89246 EMBL:Y15606 EMBL:AJ002073 EMBL:U36762
RefSeq:NP_477119.1 UniGene:Dm.2701 PDB:1PDU PDBsum:1PDU
ProteinModelPortal:P49869 SMR:P49869 DIP:DIP-929N STRING:P49869
GeneID:35332 KEGG:dme:Dmel_CG1864 CTD:35332 FlyBase:FBgn0014859
eggNOG:NOG245120 HOGENOM:HOG000046504 InParanoid:P49869 KO:K08558
OrthoDB:EOG4SXKV7 EvolutionaryTrace:P49869 GenomeRNAi:35332
NextBio:793002 Bgee:P49869 GermOnline:CG1864 Uniprot:P49869
Length = 1073
Score = 260 (96.6 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 48/94 (51%), Positives = 62/94 (65%)
Query: 111 STIAATPEHPDTKEGI-----EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
++ A++P D + G +LC VCGD + HYG+ TCE CKGFFKRTVQ Y
Sbjct: 720 NSAASSPASADLQAGRLLQAPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYV 779
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C+A+++C +DK +R RC FCRFQKCL VGM EV
Sbjct: 780 CLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEV 813
Score = 40 (19.1 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 14/51 (27%), Positives = 18/51 (35%)
Query: 32 QLLSAATGAQTPQMQHSNNDTQSSQLSPMLGNNTXXXXXXXXYNFNNMVDN 82
QL T QM H N+ SS + NN+ +N N N
Sbjct: 544 QLQQLHTLQSQAQMSHPNSSNNSSNNAGNSHNNSGGYNYHGHFNAINASAN 594
>UNIPROTKB|F1NH64 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001893 "maternal placenta
development" evidence=IEA] [GO:0004886 "9-cis retinoic acid
receptor activity" evidence=IEA] [GO:0007566 "embryo implantation"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0035357 "peroxisome proliferator
activated receptor signaling pathway" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060038
"cardiac muscle cell proliferation" evidence=IEA] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IEA]
[GO:0060687 "regulation of branching involved in prostate gland
morphogenesis" evidence=IEA] [GO:0070644 "vitamin D response
element binding" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060687
GeneTree:ENSGT00690000101777 GO:GO:0035357 GO:GO:0044323
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OMA:KHFLPLD
GO:GO:0070644 EMBL:AADN02026433 EMBL:AADN02026434 EMBL:AADN02026435
IPI:IPI00584474 Ensembl:ENSGALT00000004139 Uniprot:F1NH64
Length = 448
Score = 264 (98.0 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 53/122 (43%), Positives = 69/122 (56%)
Query: 88 SPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPD-TKEGI-EELCPVCGDKVSGYHYGLL 145
SP S +SS+ P + + P HP T + +C +CGD+ SG HYG+
Sbjct: 77 SPQLNSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVY 136
Query: 146 TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQST 204
+CE CKGFFKRTV+ YTC + C IDK QR RC +CR+QKCL +GMK E V +
Sbjct: 137 SCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQ 196
Query: 205 HG 206
G
Sbjct: 197 RG 198
>UNIPROTKB|P19793 [details] [associations]
symbol:RXRA "Retinoic acid receptor RXR-alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0060528 "secretory columnal luminar epithelial
cell differentiation involved in prostate glandular acinus
development" evidence=IEA] [GO:0060687 "regulation of branching
involved in prostate gland morphogenesis" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0044323 "retinoic acid-responsive element
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0035357 "peroxisome proliferator activated receptor signaling
pathway" evidence=IDA] [GO:0019048 "virus-host interaction"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0006766 "vitamin metabolic process" evidence=TAS]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0003708 "retinoic acid receptor activity"
evidence=TAS] [GO:0008203 "cholesterol metabolic process"
evidence=TAS] [GO:0032526 "response to retinoic acid" evidence=IMP]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0070644 "vitamin D response element binding"
evidence=IDA] [GO:0042809 "vitamin D receptor binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] Reactome:REACT_71
Reactome:REACT_111217 InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0032869 GO:GO:0045471 GO:GO:0046872 GO:GO:0007568
GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:CH471090 GO:GO:0006954 GO:GO:0045944 GO:GO:0051384
GO:GO:0007565 GO:GO:0008203 GO:GO:0001889 GO:GO:0044255
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0007494 GO:GO:0000122
GO:GO:0043065 GO:GO:0000790 GO:GO:0003713 GO:GO:0032526
GO:GO:0003690 GO:GO:0046982 GO:GO:0001890
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0033189
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0010269 GO:GO:0031490 GO:GO:0033280 GO:GO:0031103
GO:GO:0060038 GO:GO:0055010 GO:GO:0060687 HOVERGEN:HBG005606
GO:GO:0006766 PDB:1R0N PDBsum:1R0N GO:GO:0060528 GO:GO:0035357
GO:GO:0055012 GO:GO:0044323 PDB:1FM6 PDB:1FM9 PDB:1K74 PDB:1RDT
PDB:1XV9 PDB:1XVP PDB:3H0A PDBsum:1FM6 PDBsum:1FM9 PDBsum:1K74
PDBsum:1RDT PDBsum:1XV9 PDBsum:1XVP PDBsum:3H0A PDB:1MV9 PDB:1MVC
PDB:1MZN PDB:2P1T PDB:2P1U PDB:2P1V PDB:2ZXZ PDB:2ZY0 PDB:3DZU
PDB:3DZY PDB:3E00 PDB:3E94 PDB:3FUG PDB:3KWY PDB:3OAP PDB:3OZJ
PDB:3PCU PDB:3R5M PDBsum:1MV9 PDBsum:1MVC PDBsum:1MZN PDBsum:2P1T
PDBsum:2P1U PDBsum:2P1V PDBsum:2ZXZ PDBsum:2ZY0 PDBsum:3DZU
PDBsum:3DZY PDBsum:3E00 PDBsum:3E94 PDBsum:3FUG PDBsum:3KWY
PDBsum:3OAP PDBsum:3OZJ PDBsum:3PCU PDBsum:3R5M PDB:1XLS
PDBsum:1XLS PDB:3R29 PDB:3R2A PDBsum:3R29 PDBsum:3R2A PDB:2ACL
PDB:3FAL PDB:3FC6 PDBsum:2ACL PDBsum:3FAL PDBsum:3FC6
DrugBank:DB00523 DrugBank:DB00926 PDB:1DSZ PDBsum:1DSZ
DrugBank:DB00210 OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 EMBL:X52773 EMBL:AB307705 EMBL:AC156789 EMBL:AL354796
EMBL:AL669970 EMBL:AL683798 EMBL:BC110998 EMBL:DQ303444
IPI:IPI00418394 PIR:S09592 RefSeq:NP_002948.1 UniGene:Hs.590886
PDB:1BY4 PDB:1FBY PDB:1G1U PDB:1G5Y PDB:1LBD PDB:1RXR PDB:1YNW
PDB:2NLL PDB:3NSP PDB:3NSQ PDB:3UVV PDBsum:1BY4 PDBsum:1FBY
PDBsum:1G1U PDBsum:1G5Y PDBsum:1LBD PDBsum:1RXR PDBsum:1YNW
PDBsum:2NLL PDBsum:3NSP PDBsum:3NSQ PDBsum:3UVV DisProt:DP00062
ProteinModelPortal:P19793 SMR:P19793 DIP:DIP-641N IntAct:P19793
MINT:MINT-98407 STRING:P19793 PhosphoSite:P19793 DMDM:133701
PaxDb:P19793 PRIDE:P19793 DNASU:6256 Ensembl:ENST00000481739
GeneID:6256 KEGG:hsa:6256 UCSC:uc004cfb.2 CTD:6256
GeneCards:GC09P137208 HGNC:HGNC:10477 HPA:CAB004565 HPA:CAB005352
MIM:180245 neXtProt:NX_P19793 PharmGKB:PA34890 InParanoid:P19793
KO:K08524 OMA:KHFLPLD BindingDB:P19793 ChEMBL:CHEMBL2061
EvolutionaryTrace:P19793 GenomeRNAi:6256 NextBio:24295
PMAP-CutDB:P19793 ArrayExpress:P19793 Bgee:P19793 CleanEx:HS_RXRA
Genevestigator:P19793 GermOnline:ENSG00000186350 Uniprot:P19793
Length = 462
Score = 264 (98.0 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 62/177 (35%), Positives = 86/177 (48%)
Query: 35 SAATGAQTPQMQHSNNDTQSSQLSPMLGNNTXXXXXXXXYNFNNMVDNSYLFQ--SPGGG 92
S G +P HS T SS ++ M + ++ + + F SP
Sbjct: 36 SLGPGIGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLS 95
Query: 93 STNMDLSSAGISYHPFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESC 150
S +SS+ P + + P HP + +C +CGD+ SG HYG+ +CE C
Sbjct: 96 SPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGC 155
Query: 151 KGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
KGFFKRTV+ YTC + C IDK QR RC +CR+QKCL +GMK E V + G
Sbjct: 156 KGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRG 212
>RGD|3610 [details] [associations]
symbol:Rxra "retinoid X receptor alpha" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000790 "nuclear
chromatin" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0001889 "liver development"
evidence=IEP] [GO:0001890 "placenta development" evidence=IEP;ISO]
[GO:0001893 "maternal placenta development" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA;TAS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006954 "inflammatory response" evidence=IEP]
[GO:0007494 "midgut development" evidence=IEP] [GO:0007507 "heart
development" evidence=ISO] [GO:0007565 "female pregnancy"
evidence=IEP] [GO:0007566 "embryo implantation" evidence=IEA;ISO]
[GO:0007568 "aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation" evidence=IMP]
[GO:0010269 "response to selenium ion" evidence=IEP] [GO:0014070
"response to organic cyclic compound" evidence=IEP] [GO:0019048
"virus-host interaction" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0031103
"axon regeneration" evidence=IEP] [GO:0031490 "chromatin DNA binding"
evidence=IEA;ISO] [GO:0031641 "regulation of myelination"
evidence=IDA] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0032526 "response to retinoic acid" evidence=IEP;ISO] [GO:0032869
"cellular response to insulin stimulus" evidence=IEP] [GO:0033189
"response to vitamin A" evidence=IEP] [GO:0033280 "response to
vitamin D" evidence=IEP] [GO:0035357 "peroxisome proliferator
activated receptor signaling pathway" evidence=IEA;ISO] [GO:0042809
"vitamin D receptor binding" evidence=IEA;ISO] [GO:0042974 "retinoic
acid receptor binding" evidence=IPI] [GO:0043065 "positive regulation
of apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0044323 "retinoic acid-responsive
element binding" evidence=IEA;ISO] [GO:0045471 "response to ethanol"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISO]
[GO:0051384 "response to glucocorticoid stimulus" evidence=IEP;IMP]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA;ISO] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA;ISO] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA;ISO] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=IEA;ISO] [GO:0060687
"regulation of branching involved in prostate gland morphogenesis"
evidence=IEA;ISO] [GO:0070644 "vitamin D response element binding"
evidence=IEA;ISO] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3610 GO:GO:0005634 GO:GO:0019048
GO:GO:0008285 GO:GO:0006355 GO:GO:0032869 GO:GO:0045471 GO:GO:0046872
GO:GO:0007568 GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0006954 GO:GO:0045944 GO:GO:0051384
GO:GO:0007565 GO:GO:0001889 GO:GO:0007494 GO:GO:0000122 GO:GO:0043065
GO:GO:0000790 GO:GO:0032526 GO:GO:0001890 GO:GO:0033189 GO:GO:0010269
GO:GO:0031490 GO:GO:0033280 GO:GO:0031103 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 GO:GO:0031641 HOVERGEN:HBG005606 GO:GO:0060528
GO:GO:0035357 GO:GO:0055012 GO:GO:0044323 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
GO:GO:0070644 EMBL:L06482 IPI:IPI00188860 PIR:A47278 PIR:I67427
UniGene:Rn.108206 ProteinModelPortal:Q05343 SMR:Q05343 STRING:Q05343
PhosphoSite:Q05343 UCSC:RGD:3610 InParanoid:Q05343 BindingDB:Q05343
ChEMBL:CHEMBL4431 ArrayExpress:Q05343 Genevestigator:Q05343
GermOnline:ENSRNOG00000009446 Uniprot:Q05343
Length = 467
Score = 264 (98.0 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 52/122 (42%), Positives = 69/122 (56%)
Query: 88 SPGGGSTNMDLSSAGISYHPFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLL 145
SP S +SS+ P + + P HP + + +C +CGD+ SG HYG+
Sbjct: 96 SPQLNSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMSSFTKHICAICGDRSSGKHYGVY 155
Query: 146 TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQST 204
+CE CKGFFKRTV+ YTC + C IDK QR RC +CR+QKCL +GMK E V +
Sbjct: 156 SCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQ 215
Query: 205 HG 206
G
Sbjct: 216 RG 217
>UNIPROTKB|Q0VJ96 [details] [associations]
symbol:Rxra "Retinoic acid receptor RXR-alpha"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3610 GO:GO:0019048 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 HOVERGEN:HBG005606 EMBL:CH474001 GO:GO:0060528
GeneTree:ENSGT00690000101777 GO:GO:0035357 GO:GO:0055012
GO:GO:0044323 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
CTD:6256 KO:K08524 GO:GO:0070644 UniGene:Rn.108206 EMBL:AM295012
EMBL:AM295013 EMBL:AM392401 IPI:IPI00851118 RefSeq:NP_036937.2
SMR:Q0VJ96 STRING:Q0VJ96 Ensembl:ENSRNOT00000012892 GeneID:25271
KEGG:rno:25271 InParanoid:Q0VJ96 NextBio:605957
Genevestigator:Q0VJ96 Uniprot:Q0VJ96
Length = 467
Score = 264 (98.0 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 52/122 (42%), Positives = 69/122 (56%)
Query: 88 SPGGGSTNMDLSSAGISYHPFHTSTIAATPEHP--DTKEGIEELCPVCGDKVSGYHYGLL 145
SP S +SS+ P + + P HP + + +C +CGD+ SG HYG+
Sbjct: 96 SPQLNSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMSSFTKHICAICGDRSSGKHYGVY 155
Query: 146 TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQST 204
+CE CKGFFKRTV+ YTC + C IDK QR RC +CR+QKCL +GMK E V +
Sbjct: 156 SCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQ 215
Query: 205 HG 206
G
Sbjct: 216 RG 217
>UNIPROTKB|Q0VC20 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K EMBL:BC120391
IPI:IPI00712482 RefSeq:NP_001068876.1 UniGene:Bt.11333
ProteinModelPortal:Q0VC20 SMR:Q0VC20 STRING:Q0VC20 PRIDE:Q0VC20
Ensembl:ENSBTAT00000022350 GeneID:509500 KEGG:bta:509500 CTD:6258
InParanoid:Q0VC20 KO:K08526 OMA:FMKFPTG NextBio:20868991
Uniprot:Q0VC20
Length = 463
Score = 263 (97.6 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 43/82 (52%), Positives = 58/82 (70%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>UNIPROTKB|P48443 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0031641 "regulation of myelination" evidence=IEA]
[GO:0032526 "response to retinoic acid" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0005654
GO:GO:0007507 GO:GO:0030182 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0007422
EMBL:CH471067 Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0032526
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0007519 HOVERGEN:HBG005606 EMBL:AL160058 DrugBank:DB00523
DrugBank:DB00926 DrugBank:DB00210 HOGENOM:HOG000260821
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K
CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:U38480 EMBL:CR456705
EMBL:BC012063 IPI:IPI00009736 RefSeq:NP_001243500.1
RefSeq:NP_008848.1 UniGene:Hs.26550 PDB:2GL8 PDBsum:2GL8
ProteinModelPortal:P48443 SMR:P48443 DIP:DIP-56220N IntAct:P48443
MINT:MINT-1378806 STRING:P48443 PhosphoSite:P48443 DMDM:1350913
PaxDb:P48443 PRIDE:P48443 DNASU:6258 Ensembl:ENST00000359842
GeneID:6258 KEGG:hsa:6258 UCSC:uc001gda.3 GeneCards:GC01M165370
HGNC:HGNC:10479 HPA:CAB002615 MIM:180247 neXtProt:NX_P48443
PharmGKB:PA34892 InParanoid:P48443 PhylomeDB:P48443
BindingDB:P48443 ChEMBL:CHEMBL2004 EvolutionaryTrace:P48443
GenomeRNAi:6258 NextBio:24303 ArrayExpress:P48443 Bgee:P48443
CleanEx:HS_RXRG Genevestigator:P48443 GermOnline:ENSG00000143171
Uniprot:P48443
Length = 463
Score = 263 (97.6 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 43/82 (52%), Positives = 58/82 (70%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>UNIPROTKB|Q0GFF6 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 OMA:FMKFPTG EMBL:DQ866834 EMBL:AY429474
RefSeq:NP_001123685.1 UniGene:Ssc.19608 ProteinModelPortal:Q0GFF6
SMR:Q0GFF6 STRING:Q0GFF6 Ensembl:ENSSSCT00000006936 GeneID:445465
KEGG:ssc:445465 Uniprot:Q0GFF6
Length = 463
Score = 263 (97.6 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 43/82 (52%), Positives = 58/82 (70%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>MGI|MGI:98216 [details] [associations]
symbol:Rxrg "retinoid X receptor gamma" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031641
"regulation of myelination" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IGI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IDA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:98216 GO:GO:0005634
GO:GO:0007507 GO:GO:0030182 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0007422
GO:GO:0032526 GO:GO:0007519 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 OMA:FMKFPTG EMBL:M84819 EMBL:X66225 EMBL:S62948
EMBL:BC058401 IPI:IPI00124345 PIR:B41727 PIR:S26670
RefSeq:NP_001153203.1 RefSeq:NP_033133.1 UniGene:Mm.3475
ProteinModelPortal:P28705 SMR:P28705 STRING:P28705
PhosphoSite:P28705 PRIDE:P28705 Ensembl:ENSMUST00000015987
Ensembl:ENSMUST00000111384 Ensembl:ENSMUST00000111386 GeneID:20183
KEGG:mmu:20183 UCSC:uc007dla.2 InParanoid:P28705 BindingDB:P28705
ChEMBL:CHEMBL4402 NextBio:297713 Bgee:P28705 CleanEx:MM_RXRG
Genevestigator:P28705 GermOnline:ENSMUSG00000015843 Uniprot:P28705
Length = 463
Score = 263 (97.6 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 43/82 (52%), Positives = 58/82 (70%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>RGD|620046 [details] [associations]
symbol:Rxrg "retinoid X receptor gamma" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0007422
"peripheral nervous system development" evidence=IEP] [GO:0007507
"heart development" evidence=IEP] [GO:0007519 "skeletal muscle
tissue development" evidence=IEP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0030182 "neuron differentiation" evidence=IEP]
[GO:0031641 "regulation of myelination" evidence=IDA] [GO:0032526
"response to retinoic acid" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:620046
GO:GO:0005634 GO:GO:0007507 GO:GO:0030182 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0007422 GO:GO:0014070 GO:GO:0032526 GO:GO:0032870
GO:GO:0031641 GO:GO:0007519 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HSSP:P19793 HOGENOM:HOG000260821
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K
CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:BC091363 IPI:IPI00363863
RefSeq:NP_113953.1 UniGene:Rn.40816 ProteinModelPortal:Q5BJR8
SMR:Q5BJR8 STRING:Q5BJR8 PhosphoSite:Q5BJR8
Ensembl:ENSRNOT00000006117 GeneID:83574 KEGG:rno:83574
UCSC:RGD:620046 InParanoid:Q5BJR8 BindingDB:Q5BJR8
ChEMBL:CHEMBL4277 NextBio:616077 ArrayExpress:Q5BJR8
Genevestigator:Q5BJR8 Uniprot:Q5BJR8
Length = 463
Score = 263 (97.6 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 43/82 (52%), Positives = 58/82 (70%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>ZFIN|ZDB-GENE-040718-103 [details] [associations]
symbol:nr4a2b "nuclear receptor subfamily 4, group
A, member 2b" species:7955 "Danio rerio" [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021953 "central nervous system neuron differentiation"
evidence=IMP] [GO:0021884 "forebrain neuron development"
evidence=IMP] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040718-103 GO:GO:0005634 GO:GO:0046872 GO:GO:0071542
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GO:GO:0021884 eggNOG:NOG245120 KO:K08558 HOGENOM:HOG000230925
HOVERGEN:HBG052663 EMBL:BC076176 IPI:IPI00833876
RefSeq:NP_001002406.1 UniGene:Dr.12803 ProteinModelPortal:Q6DH08
SMR:Q6DH08 STRING:Q6DH08 GeneID:436679 KEGG:dre:436679 CTD:436679
InParanoid:Q6DH08 NextBio:20831122 ArrayExpress:Q6DH08
Uniprot:Q6DH08
Length = 586
Score = 266 (98.7 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 53/118 (44%), Positives = 70/118 (59%)
Query: 82 NSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYH 141
+S+ +P + LS + HP S +A+ P+ + E LC VCGD + H
Sbjct: 212 DSFALPAPPRKQHGVGLSHSLNVGHPLLESPVAS-PQARGSPSS-EGLCAVCGDNAACQH 269
Query: 142 YGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
YG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 270 YGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLVVGMVKEV 327
>UNIPROTKB|F1MX52 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070644 "vitamin D response element binding"
evidence=IEA] [GO:0060687 "regulation of branching involved in
prostate gland morphogenesis" evidence=IEA] [GO:0060528 "secretory
columnal luminar epithelial cell differentiation involved in
prostate glandular acinus development" evidence=IEA] [GO:0060038
"cardiac muscle cell proliferation" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044323
"retinoic acid-responsive element binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042809 "vitamin D receptor binding" evidence=IEA] [GO:0035357
"peroxisome proliferator activated receptor signaling pathway"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0007566 "embryo implantation"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0001893 "maternal placenta development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0019048 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 GO:GO:0060528 GeneTree:ENSGT00690000101777
GO:GO:0035357 GO:GO:0055012 GO:GO:0044323 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OMA:KHFLPLD GO:GO:0070644
EMBL:DAAA02032421 EMBL:DAAA02032422 EMBL:DAAA02032423
IPI:IPI00722888 Ensembl:ENSBTAT00000023729 Uniprot:F1MX52
Length = 474
Score = 263 (97.6 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 52/122 (42%), Positives = 68/122 (55%)
Query: 88 SPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLL 145
SP S +SS+ P + + P HP + +C +CGD+ SG HYG+
Sbjct: 103 SPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVY 162
Query: 146 TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQST 204
+CE CKGFFKRTV+ YTC + C IDK QR RC +CR+QKCL +GMK E V +
Sbjct: 163 SCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQ 222
Query: 205 HG 206
G
Sbjct: 223 RG 224
>UNIPROTKB|F1P6M9 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 InterPro:IPR021780
Pfam:PF11825 OMA:KHFLPLD EMBL:AAEX03006790
Ensembl:ENSCAFT00000031555 Uniprot:F1P6M9
Length = 486
Score = 263 (97.6 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 52/122 (42%), Positives = 68/122 (55%)
Query: 88 SPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLL 145
SP S +SS+ P + + P HP + +C +CGD+ SG HYG+
Sbjct: 115 SPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVY 174
Query: 146 TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQST 204
+CE CKGFFKRTV+ YTC + C IDK QR RC +CR+QKCL +GMK E V +
Sbjct: 175 SCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQ 234
Query: 205 HG 206
G
Sbjct: 235 RG 236
>ZFIN|ZDB-GENE-980526-72 [details] [associations]
symbol:rarab "retinoic acid receptor, alpha b"
species:7955 "Danio rerio" [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0003708
"retinoic acid receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-72 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:BX537121 EMBL:CR392003
IPI:IPI00993231 Ensembl:ENSDART00000126022 Uniprot:E7EZ95
Length = 460
Score = 262 (97.3 bits), Expect = 4.0e-22, P = 4.0e-22
Identities = 48/100 (48%), Positives = 60/100 (60%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
S A + + I +P P + + C VC DK SGYHYG+ CE CKGFF+R++
Sbjct: 54 SPATVETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSI 113
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
Q VYTC E+SC I+K R RC +CR QKCLEVGM E
Sbjct: 114 QKNMVYTCHREKSCIINKVTRNRCQYCRLQKCLEVGMSKE 153
>MGI|MGI:98214 [details] [associations]
symbol:Rxra "retinoid X receptor alpha" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IGI] [GO:0001890 "placenta development"
evidence=IMP] [GO:0001893 "maternal placenta development"
evidence=IGI] [GO:0003007 "heart morphogenesis" evidence=TAS]
[GO:0003677 "DNA binding" evidence=ISO;IDA;IPI] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IGI] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO;IDA] [GO:0004886 "9-cis retinoic acid receptor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0007507 "heart development" evidence=IMP;TAS]
[GO:0007566 "embryo implantation" evidence=IGI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0010629 "negative regulation of
gene expression" evidence=TAS] [GO:0019048 "virus-host interaction"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0031490 "chromatin DNA
binding" evidence=IDA] [GO:0031641 "regulation of myelination"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0032526 "response to retinoic acid" evidence=ISO] [GO:0035357
"peroxisome proliferator activated receptor signaling pathway"
evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IGI] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0044323 "retinoic acid-responsive
element binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI;TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=ISO;IDA] [GO:0051384 "response to glucocorticoid
stimulus" evidence=ISO] [GO:0055007 "cardiac muscle cell
differentiation" evidence=TAS] [GO:0055010 "ventricular cardiac
muscle tissue morphogenesis" evidence=IMP] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IGI;IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IGI;IMP;TAS]
[GO:0060485 "mesenchyme development" evidence=TAS] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IMP]
[GO:0060687 "regulation of branching involved in prostate gland
morphogenesis" evidence=IMP] [GO:0060978 "angiogenesis involved in
coronary vascular morphogenesis" evidence=TAS] [GO:0061032
"visceral serous pericardium development" evidence=TAS]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:98214 GO:GO:0019048 GO:GO:0008285
GO:GO:0005654 GO:GO:0032869 GO:GO:0045471 GO:GO:0046872
GO:GO:0007568 GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0001701 GO:GO:0006954 GO:GO:0045944
GO:GO:0051384 GO:GO:0001889 GO:GO:0007494 GO:GO:0000122
GO:GO:0043065 Reactome:REACT_127416 GO:GO:0000790 GO:GO:0032526
GO:GO:0060978 GO:GO:0003690 GO:GO:0010629 GO:GO:0001893
GO:GO:0033189 GO:GO:0010269 GO:GO:0031490 GO:GO:0033280
GO:GO:0007566 GO:GO:0031103 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 Reactome:REACT_27166 HOVERGEN:HBG005606 GO:GO:0061032
GO:GO:0060528 GO:GO:0060485 GeneTree:ENSGT00690000101777
GO:GO:0035357 PDB:1XDK PDBsum:1XDK GO:GO:0055012 GO:GO:0044323
PDB:3A9E PDBsum:3A9E PDB:1DKF PDBsum:1DKF HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
CTD:6256 KO:K08524 OMA:KHFLPLD EMBL:M84817 EMBL:X66223
IPI:IPI00467109 PIR:S26668 RefSeq:NP_035435.1 UniGene:Mm.24624
ProteinModelPortal:P28700 SMR:P28700 IntAct:P28700
MINT:MINT-2775018 STRING:P28700 PhosphoSite:P28700 PRIDE:P28700
Ensembl:ENSMUST00000077257 Ensembl:ENSMUST00000166775 GeneID:20181
KEGG:mmu:20181 InParanoid:P28700 BindingDB:P28700 ChEMBL:CHEMBL3084
ChiTaRS:RXRA EvolutionaryTrace:P28700 NextBio:297705 Bgee:P28700
CleanEx:MM_RXRA Genevestigator:P28700 GermOnline:ENSMUSG00000015846
GO:GO:0070644 Uniprot:P28700
Length = 467
Score = 262 (97.3 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 52/122 (42%), Positives = 67/122 (54%)
Query: 88 SPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLL 145
SP S +SS P + + P HP + +C +CGD+ SG HYG+
Sbjct: 96 SPQLNSPMNPVSSTEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVY 155
Query: 146 TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQST 204
+CE CKGFFKRTV+ YTC + C IDK QR RC +CR+QKCL +GMK E V +
Sbjct: 156 SCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQ 215
Query: 205 HG 206
G
Sbjct: 216 RG 217
>UNIPROTKB|O97726 [details] [associations]
symbol:NOR-1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000108 "positive regulation of leukocyte apoptotic
process" evidence=IEA] [GO:0060005 "vestibular reflex"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0045787 "positive regulation of
cell cycle" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA] [GO:0033554 "cellular response to
stress" evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007411 GO:GO:0021766
GO:GO:0033554 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0050885 GO:GO:0043524 GO:GO:0005667
GO:GO:0001077 GO:GO:0001707 GO:GO:0030534 GO:GO:0030522
GO:GO:0045787 GO:GO:0048752 eggNOG:NOG245120
GeneTree:ENSGT00640000091364 HOGENOM:HOG000230925
HOVERGEN:HBG052663 HSSP:P43354 KO:K08559 OMA:PSTSMYF
OrthoDB:EOG4894MB GO:GO:2000108 GO:GO:0060005 EMBL:CU302447
EMBL:CU210903 EMBL:AJ011767 RefSeq:NP_999412.1 UniGene:Ssc.761
SMR:O97726 STRING:O97726 Ensembl:ENSSSCT00000005925 GeneID:397479
KEGG:ssc:397479 CTD:397479 Uniprot:O97726
Length = 643
Score = 265 (98.3 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 51/106 (48%), Positives = 64/106 (60%)
Query: 99 SSAGISYHPFHTSTIAATPEHPD-----TKEGIEELCPVCGDKVSGYHYGLLTCESCKGF 153
S G++ P +S + +P P T G E C VCGD + HYG+ TCE CKGF
Sbjct: 274 SPLGLTTSPTTSSLLGESPSLPSPPNRSTASG-EGTCAVCGDNAACQHYGVRTCEGCKGF 332
Query: 154 FKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
FKRTVQ Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 333 FKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEV 378
>WB|WBGene00003681 [details] [associations]
symbol:nhr-91 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040026 "positive regulation of vulval development"
evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0009792
GO:GO:0040010 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0019915 GO:GO:0040026
GeneTree:ENSGT00670000097927 eggNOG:NOG253308 KO:K09185
EMBL:AY349017 EMBL:AY349018 EMBL:AL132841 RefSeq:NP_001024953.1
RefSeq:NP_001024954.1 UniGene:Cel.17921 ProteinModelPortal:Q9U2R6
SMR:Q9U2R6 DIP:DIP-27347N IntAct:Q9U2R6 MINT:MINT-229444
STRING:Q9U2R6 EnsemblMetazoa:Y15E3A.1a.1 EnsemblMetazoa:Y15E3A.1a.2
GeneID:181621 KEGG:cel:CELE_Y15E3A.1 UCSC:Y15E3A.1b.3 CTD:181621
WormBase:Y15E3A.1a WormBase:Y15E3A.1b InParanoid:Q9U2R6 OMA:PVEAHTH
NextBio:914698 ArrayExpress:Q9U2R6 Uniprot:Q9U2R6
Length = 474
Score = 261 (96.9 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 48/91 (52%), Positives = 56/91 (61%)
Query: 112 TIAATPEHPDTKEGIEE----LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCV 167
+I TP T + + LC VCGDK +G HYG TCE CKGFFKR+VQNKKVY C
Sbjct: 78 SILGTPTTDSTSNAVSKSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCS 137
Query: 168 AERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
+ C IDK R RC CRF+KC+ GM E
Sbjct: 138 QDNCCEIDKQNRNRCQSCRFRKCISKGMLTE 168
>UNIPROTKB|Q9U2R6 [details] [associations]
symbol:nhr-91 "Nuclear hormone receptor family member
nhr-91" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0019915 GO:GO:0040026 GeneTree:ENSGT00670000097927
eggNOG:NOG253308 KO:K09185 EMBL:AY349017 EMBL:AY349018
EMBL:AL132841 RefSeq:NP_001024953.1 RefSeq:NP_001024954.1
UniGene:Cel.17921 ProteinModelPortal:Q9U2R6 SMR:Q9U2R6
DIP:DIP-27347N IntAct:Q9U2R6 MINT:MINT-229444 STRING:Q9U2R6
EnsemblMetazoa:Y15E3A.1a.1 EnsemblMetazoa:Y15E3A.1a.2 GeneID:181621
KEGG:cel:CELE_Y15E3A.1 UCSC:Y15E3A.1b.3 CTD:181621
WormBase:Y15E3A.1a WormBase:Y15E3A.1b InParanoid:Q9U2R6 OMA:PVEAHTH
NextBio:914698 ArrayExpress:Q9U2R6 Uniprot:Q9U2R6
Length = 474
Score = 261 (96.9 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 48/91 (52%), Positives = 56/91 (61%)
Query: 112 TIAATPEHPDTKEGIEE----LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCV 167
+I TP T + + LC VCGDK +G HYG TCE CKGFFKR+VQNKKVY C
Sbjct: 78 SILGTPTTDSTSNAVSKSSSKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCS 137
Query: 168 AERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
+ C IDK R RC CRF+KC+ GM E
Sbjct: 138 QDNCCEIDKQNRNRCQSCRFRKCISKGMLTE 168
>UNIPROTKB|A8MUP8 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 EMBL:CH471152 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
HOVERGEN:HBG005606 GO:GO:0003708 HOGENOM:HOG000010312 EMBL:AC080112
UniGene:Hs.654583 HGNC:HGNC:9864 ChiTaRS:RARA IPI:IPI00014923
SMR:A8MUP8 STRING:A8MUP8 Ensembl:ENST00000394086 Uniprot:A8MUP8
Length = 478
Score = 261 (96.9 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 48/112 (42%), Positives = 65/112 (58%)
Query: 87 QSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLT 146
++P G D++ + I + I +P P I + C VC DK SGYHYG+
Sbjct: 61 RAPRAGWRAGDVTGSAIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSA 120
Query: 147 CESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
CE CKGFF+R++Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 121 CEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 172
>RGD|621685 [details] [associations]
symbol:Nr2f6 "nuclear receptor subfamily 2, group F, member 6"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter"
evidence=IEA;ISO;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043153 "entrainment of circadian clock by photoperiod"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO;IDA] [GO:0048666 "neuron development"
evidence=IEA;ISO] [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:621685 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0003700
GO:GO:0000122 GO:GO:0048666 GO:GO:0030522 GO:GO:0043153
HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:2063 eggNOG:NOG277317
KO:K08549 OrthoDB:EOG4FN4HT EMBL:AF003926 IPI:IPI00192618
RefSeq:NP_620813.1 UniGene:Rn.25840 ProteinModelPortal:O09017
SMR:O09017 STRING:O09017 PhosphoSite:O09017 GeneID:245980
KEGG:rno:245980 UCSC:RGD:621685 InParanoid:O09017 NextBio:623270
ArrayExpress:O09017 Genevestigator:O09017
GermOnline:ENSRNOG00000016892 Uniprot:O09017
Length = 390
Score = 256 (95.2 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 53/118 (44%), Positives = 69/118 (58%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPE------HPDTKE--GIEELCPVCGDKVSGY 140
PGG + +D AG SY P T +A+P P +E G++ C VCGDK SG
Sbjct: 11 PGGDTNGVD--KAGGSY-PRATEDDSASPPGATSDAEPGDEERPGLQVDCVVCGDKSSGK 67
Query: 141 HYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
HYG+ TCE CK FFKRT++ YTC + R C ID+ R +C +CR +KC VGM+ E
Sbjct: 68 HYGVFTCEGCKSFFKRTIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKE 125
>UNIPROTKB|O09017 [details] [associations]
symbol:Nr2f6 "Nuclear receptor subfamily 2 group F member
6" species:10116 "Rattus norvegicus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:621685 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0003700 GO:GO:0000122 GO:GO:0048666 GO:GO:0030522
GO:GO:0043153 HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:2063
eggNOG:NOG277317 KO:K08549 OrthoDB:EOG4FN4HT EMBL:AF003926
IPI:IPI00192618 RefSeq:NP_620813.1 UniGene:Rn.25840
ProteinModelPortal:O09017 SMR:O09017 STRING:O09017
PhosphoSite:O09017 GeneID:245980 KEGG:rno:245980 UCSC:RGD:621685
InParanoid:O09017 NextBio:623270 ArrayExpress:O09017
Genevestigator:O09017 GermOnline:ENSRNOG00000016892 Uniprot:O09017
Length = 390
Score = 256 (95.2 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 53/118 (44%), Positives = 69/118 (58%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPE------HPDTKE--GIEELCPVCGDKVSGY 140
PGG + +D AG SY P T +A+P P +E G++ C VCGDK SG
Sbjct: 11 PGGDTNGVD--KAGGSY-PRATEDDSASPPGATSDAEPGDEERPGLQVDCVVCGDKSSGK 67
Query: 141 HYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
HYG+ TCE CK FFKRT++ YTC + R C ID+ R +C +CR +KC VGM+ E
Sbjct: 68 HYGVFTCEGCKSFFKRTIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKE 125
>MGI|MGI:104740 [details] [associations]
symbol:Ppara "peroxisome proliferator activated receptor
alpha" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0001666 "response
to hypoxia" evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IMP] [GO:0003707 "steroid hormone receptor
activity" evidence=ISO;TAS] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;TAS] [GO:0006006 "glucose
metabolic process" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;TAS] [GO:0006629 "lipid
metabolic process" evidence=TAS] [GO:0006631 "fatty acid metabolic
process" evidence=ISO;IMP;TAS] [GO:0008144 "drug binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008289 "lipid binding" evidence=ISO;IDA] [GO:0008544
"epidermis development" evidence=IMP] [GO:0010468 "regulation of
gene expression" evidence=IMP] [GO:0010745 "negative regulation of
macrophage derived foam cell differentiation" evidence=ISO]
[GO:0010871 "negative regulation of receptor biosynthetic process"
evidence=ISO] [GO:0010887 "negative regulation of cholesterol
storage" evidence=ISO] [GO:0010891 "negative regulation of
sequestering of triglyceride" evidence=ISO] [GO:0019217 "regulation
of fatty acid metabolic process" evidence=IMP] [GO:0019902
"phosphatase binding" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=ISO] [GO:0031624 "ubiquitin
conjugating enzyme binding" evidence=ISO] [GO:0032091 "negative
regulation of protein binding" evidence=ISO] [GO:0032099 "negative
regulation of appetite" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0032868 "response to insulin stimulus"
evidence=ISO] [GO:0035095 "behavioral response to nicotine"
evidence=ISO] [GO:0042060 "wound healing" evidence=IMP] [GO:0042157
"lipoprotein metabolic process" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045776 "negative
regulation of blood pressure" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI;IDA] [GO:0046321 "positive
regulation of fatty acid oxidation" evidence=IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=TAS] [GO:0051525 "NFAT
protein binding" evidence=ISO] [GO:0070166 "enamel mineralization"
evidence=IMP] [GO:0072363 "regulation of glycolysis by positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0072366 "regulation of cellular ketone metabolic
process by positive regulation of transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0072369 "regulation of lipid
transport by positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0097371 "MDM2/MDM4 family
protein binding" evidence=ISO] [GO:1901215 "negative regulation of
neuron death" evidence=ISO] [GO:2000678 "negative regulation of
transcription regulatory region DNA binding" evidence=ISO]
Reactome:REACT_112621 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003074 InterPro:IPR003076
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01289
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
MGI:MGI:104740 GO:GO:0005654 GO:GO:0007507 GO:GO:0046872
GO:GO:0008144 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0001666 GO:GO:0045944 GO:GO:0045776 GO:GO:0006631
GO:GO:0003700 GO:GO:0006006 GO:GO:0046321 GO:GO:0042157
GO:GO:0010887 GO:GO:0032868 GO:GO:0000122 GO:GO:0010891
GO:GO:0008289 GO:GO:0046982 GO:GO:0042060 GO:GO:0008544
GO:GO:0070166 Reactome:REACT_109335 Reactome:REACT_24972
GO:GO:0032099 eggNOG:NOG266867 GO:GO:0072363 GO:GO:0072369
GO:GO:0010871 CTD:5465 HOGENOM:HOG000261626 HOVERGEN:HBG106004
KO:K07294 OMA:ICPLSPL OrthoDB:EOG4FFD1Q GO:GO:0072366 EMBL:X57638
EMBL:X75289 EMBL:X75290 EMBL:X75291 EMBL:X75292 EMBL:X75293
EMBL:X75294 EMBL:BC016892 EMBL:X89577 IPI:IPI00314804 PIR:JC2085
RefSeq:NP_001106889.1 RefSeq:NP_035274.2 UniGene:Mm.212789
ProteinModelPortal:P23204 SMR:P23204 DIP:DIP-5958N IntAct:P23204
STRING:P23204 PhosphoSite:P23204 PRIDE:P23204
Ensembl:ENSMUST00000057979 Ensembl:ENSMUST00000109422
Ensembl:ENSMUST00000109423 GeneID:19013 KEGG:mmu:19013
InParanoid:P23204 BindingDB:P23204 ChEMBL:CHEMBL2128 NextBio:295428
Bgee:P23204 CleanEx:MM_PPARA Genevestigator:P23204
GermOnline:ENSMUSG00000022383 Uniprot:P23204
Length = 468
Score = 260 (96.6 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 56/117 (47%), Positives = 66/117 (56%)
Query: 81 DNSYLFQSPGG-GSTNMDLSSAGISYHPFHTSTI-AATPEHPDTKEGIEELCPVCGDKVS 138
D YL PG GS D S S I A+T E P + IE C +CGDK S
Sbjct: 53 DYQYLGSCPGSEGSVITDTLSPASSPSSVSCPVIPASTDESPGSALNIE--CRICGDKAS 110
Query: 139 GYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
GYHYG+ CE CKGFF+RT++ K VY +RSC I K R +C +CRF KCL VGM
Sbjct: 111 GYHYGVHACEGCKGFFRRTIRLKLVYD-KCDRSCKIQKKNRNKCQYCRFHKCLSVGM 166
>ZFIN|ZDB-GENE-980526-284 [details] [associations]
symbol:raraa "retinoic acid receptor, alpha a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA;IDA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA;IDA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0032526
"response to retinoic acid" evidence=IDA] [GO:0021575 "hindbrain
morphogenesis" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-284 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0032526
GO:GO:0021575 HOVERGEN:HBG005606 GO:GO:0003708 EMBL:S74155
EMBL:L03398 EMBL:BC092692 IPI:IPI00505878 PIR:I51256
RefSeq:NP_571481.2 UniGene:Dr.193 HSSP:P10276
ProteinModelPortal:Q90271 SMR:Q90271 STRING:Q90271
Ensembl:ENSDART00000079336 GeneID:30680 KEGG:dre:30680 CTD:30680
eggNOG:NOG297448 GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312
InParanoid:Q90271 KO:K08527 OMA:RTENVCI OrthoDB:EOG4F7NK7
NextBio:20807033 ArrayExpress:Q90271 Bgee:Q90271 Uniprot:Q90271
Length = 444
Score = 259 (96.2 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 48/100 (48%), Positives = 60/100 (60%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
S+ I + I +P P I + C VC DK SGYHYG+ CE CKGFF+R++
Sbjct: 44 SNHSIETQSTSSEEIVPSPPSPPPPPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSI 103
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
Q VYTC E++C I+K R RC +CR QKCLEVGM E
Sbjct: 104 QKNMVYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKE 143
>UNIPROTKB|Q0V8F0 [details] [associations]
symbol:NR4A1 "Nuclear receptor subfamily 4 group A member
1" species:9913 "Bos taurus" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0044344 "cellular
response to fibroblast growth factor stimulus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043154 "negative regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0035924
"cellular response to vascular endothelial growth factor stimulus"
evidence=IEA] [GO:0035767 "endothelial cell chemotaxis"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001938 "positive regulation of endothelial cell
proliferation" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003071
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01285
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0043154 GO:GO:0006917 GO:GO:0044344 GO:GO:0046872
GO:GO:0001938 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0005667 GO:GO:0001077 GO:GO:0030522 GO:GO:0002042
GO:GO:0035924 GO:GO:0035767 eggNOG:NOG245120
GeneTree:ENSGT00640000091364 EMBL:BT026269 IPI:IPI00686023
RefSeq:NP_001069379.1 UniGene:Bt.23373 ProteinModelPortal:Q0V8F0
SMR:Q0V8F0 STRING:Q0V8F0 PRIDE:Q0V8F0 Ensembl:ENSBTAT00000000648
GeneID:528390 KEGG:bta:528390 CTD:3164 HOGENOM:HOG000230925
HOVERGEN:HBG052663 InParanoid:Q0V8F0 KO:K04465 OMA:KWAEKIP
OrthoDB:EOG4VMFF7 NextBio:20874811 ArrayExpress:Q0V8F0
Uniprot:Q0V8F0
Length = 598
Score = 262 (97.3 bits), Expect = 9.2e-22, P = 9.2e-22
Identities = 59/119 (49%), Positives = 68/119 (57%)
Query: 83 SYLFQS--PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGY 140
SY Q+ PG T+ L +G P TS A + P EG C VCGD S
Sbjct: 223 SYSMQTAFPGLVPTSPHLDGSGRLDAPV-TSAKARSGA-PGGSEG---RCAVCGDNASCQ 277
Query: 141 HYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 278 HYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 336
>UNIPROTKB|K9J6P0 [details] [associations]
symbol:K9J6P0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003071 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01285 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GeneTree:ENSGT00640000091364 EMBL:AAEX03015017
Ensembl:ENSCAFT00000011743 Uniprot:K9J6P0
Length = 562
Score = 261 (96.9 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 54/111 (48%), Positives = 63/111 (56%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ L G+ P ++ A P EG C VCGD S HYG+ TCE
Sbjct: 195 PGLAPTSPHLDGPGMLDAPVPSAK--ARSGAPSGSEG---RCAVCGDNASCQHYGVRTCE 249
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 250 GCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 300
>UNIPROTKB|B7Z3E4 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0003700
GO:GO:0006351 EMBL:AL645940 EMBL:AL662824 EMBL:AL844527
EMBL:CR759733 EMBL:CR354565 UniGene:Hs.388034 HGNC:HGNC:10478
ChiTaRS:RXRB EMBL:AK295759 IPI:IPI00922754 SMR:B7Z3E4 STRING:B7Z3E4
Ensembl:ENST00000413614 Ensembl:ENST00000549096
Ensembl:ENST00000549320 Ensembl:ENST00000551433
Ensembl:ENST00000553107 UCSC:uc003ode.1 HOVERGEN:HBG105962
Uniprot:B7Z3E4
Length = 286
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 89 PGGGS-TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGGGS D+ + H P P + LC +CGD+ SG HYG+ +C
Sbjct: 73 PGGGSGPPEDVKPPVLGVRGLHC------PPPPGGPGAGKRLCAICGDRSSGKHYGVYSC 126
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
E CKGFFKRT++ Y+C + C +DK QR RC +CR+QKCL GMK E V + G
Sbjct: 127 EGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRG 186
>RGD|3534 [details] [associations]
symbol:Rara "retinoic acid receptor, alpha" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000900 "translation repressor activity,
nucleic acid binding" evidence=IDA] [GO:0001657 "ureteric bud
development" evidence=ISO] [GO:0001889 "liver development"
evidence=IEP] [GO:0001972 "retinoic acid binding" evidence=ISO]
[GO:0003417 "growth plate cartilage development" evidence=ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003708 "retinoic acid receptor activity"
evidence=ISO;IDA;TAS] [GO:0003713 "transcription coactivator
activity" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=ISO] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=ISO] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0006950 "response to stress" evidence=IEP]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007281 "germ
cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007565 "female pregnancy" evidence=IEP]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0008144 "drug binding" evidence=IDA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=IDA] [GO:0008584 "male
gonad development" evidence=IDA] [GO:0010628 "positive regulation of
gene expression" evidence=ISO] [GO:0010629 "negative regulation of
gene expression" evidence=ISO] [GO:0017148 "negative regulation of
translation" evidence=IDA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0030425
"dendrite" evidence=ISO;IDA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=ISO] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=ISO] [GO:0030850
"prostate gland development" evidence=IEP] [GO:0030852 "regulation of
granulocyte differentiation" evidence=ISO] [GO:0030853 "negative
regulation of granulocyte differentiation" evidence=ISO] [GO:0031490
"chromatin DNA binding" evidence=ISO] [GO:0031641 "regulation of
myelination" evidence=IDA] [GO:0032355 "response to estradiol
stimulus" evidence=IEP;ISO] [GO:0032526 "response to retinoic acid"
evidence=ISO] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=ISO] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=ISO] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=ISO] [GO:0032753
"positive regulation of interleukin-4 production" evidence=ISO]
[GO:0032754 "positive regulation of interleukin-5 production"
evidence=ISO] [GO:0033189 "response to vitamin A" evidence=IEP]
[GO:0034097 "response to cytokine stimulus" evidence=IEP] [GO:0035264
"multicellular organism growth" evidence=ISO] [GO:0042981 "regulation
of apoptotic process" evidence=IDA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043277 "apoptotic cell clearance" evidence=ISO] [GO:0043422
"protein kinase B binding" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0044323 "retinoic acid-responsive element binding" evidence=ISO]
[GO:0045471 "response to ethanol" evidence=IDA] [GO:0045596 "negative
regulation of cell differentiation" evidence=ISO] [GO:0045630
"positive regulation of T-helper 2 cell differentiation"
evidence=ISO] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IDA] [GO:0045787 "positive regulation of
cell cycle" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0045947 "negative regulation of
translational initiation" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048027 "mRNA 5'-UTR
binding" evidence=IDA] [GO:0048167 "regulation of synaptic
plasticity" evidence=IDA] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO;IDA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0051018 "protein kinase A binding"
evidence=ISO] [GO:0051099 "positive regulation of binding"
evidence=ISO] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=ISO] [GO:0060010 "Sertoli cell fate
commitment" evidence=ISO] [GO:0060591 "chondroblast differentiation"
evidence=ISO] [GO:0061037 "negative regulation of cartilage
development" evidence=ISO] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=ISO] [GO:0071300 "cellular response to
retinoic acid" evidence=ISO] [GO:0071391 "cellular response to
estrogen stimulus" evidence=ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 RGD:3534 GO:GO:0005634 GO:GO:0048471
GO:GO:0048167 GO:GO:0008285 GO:GO:0006950 GO:GO:0042981 GO:GO:0032355
GO:GO:0045471 GO:GO:0046872 GO:GO:0008144 GO:GO:0030425 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0034097 GO:GO:0007565 GO:GO:0008584
GO:GO:0048027 GO:GO:0045666 GO:GO:0030850 GO:GO:0033189 GO:GO:0000900
GO:GO:0031641 HOVERGEN:HBG005606 GO:GO:0003708 HSSP:P10276
HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7 UniGene:Rn.91057 EMBL:AJ002940
IPI:IPI00389542 ProteinModelPortal:Q9QWT4 STRING:Q9QWT4 UCSC:RGD:3534
InParanoid:Q9QWT4 Genevestigator:Q9QWT4 Uniprot:Q9QWT4
Length = 302
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 47/100 (47%), Positives = 59/100 (59%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
S A I + I +P P I + C VC DK SGYHYG+ CE CKGFF+R++
Sbjct: 40 SPATIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSI 99
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 100 QKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 139
>UNIPROTKB|P51666 [details] [associations]
symbol:NR4A1 "Nuclear receptor subfamily 4 group A member
1" species:9615 "Canis lupus familiaris" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0044344 "cellular
response to fibroblast growth factor stimulus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043154 "negative regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0035924
"cellular response to vascular endothelial growth factor stimulus"
evidence=IEA] [GO:0035767 "endothelial cell chemotaxis"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001938 "positive regulation of endothelial cell
proliferation" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003071
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01285
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0043154 GO:GO:0006917 GO:GO:0044344 GO:GO:0046872
GO:GO:0001938 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0005667 GO:GO:0001077 GO:GO:0030522 GO:GO:0002042
GO:GO:0035924 GO:GO:0035767 eggNOG:NOG245120 CTD:3164
HOGENOM:HOG000230925 HOVERGEN:HBG052663 KO:K04465 OrthoDB:EOG4VMFF7
EMBL:X97226 RefSeq:NP_001003227.1 UniGene:Cfa.1213
ProteinModelPortal:P51666 SMR:P51666 STRING:P51666 GeneID:403897
KEGG:cfa:403897 InParanoid:P51666 NextBio:20817389 Uniprot:P51666
Length = 598
Score = 261 (96.9 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 54/111 (48%), Positives = 63/111 (56%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
PG T+ L G+ P ++ A P EG C VCGD S HYG+ TCE
Sbjct: 231 PGLAPTSPHLDGPGMLDAPVPSAK--ARSGAPSGSEG---RCAVCGDNASCQHYGVRTCE 285
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
CKGFFKRTVQ Y C+A + C +DK +R RC FCRFQKCL VGM EV
Sbjct: 286 GCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEV 336
>ZFIN|ZDB-GENE-980526-36 [details] [associations]
symbol:rxrga "retinoid x receptor, gamma a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0004886 "9-cis
retinoic acid receptor activity" evidence=IDA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-36 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 HOVERGEN:HBG005606 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 KO:K08524 EMBL:U29940 EMBL:BC059576
IPI:IPI00511229 PIR:I50515 RefSeq:NP_571292.2 UniGene:Dr.348
ProteinModelPortal:Q90416 SMR:Q90416 STRING:Q90416 GeneID:30464
KEGG:dre:30464 CTD:30464 OrthoDB:EOG42RD7K NextBio:20806858
ArrayExpress:Q90416 Uniprot:Q90416
Length = 441
Score = 257 (95.5 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 53/122 (43%), Positives = 68/122 (55%)
Query: 88 SPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGI--EELCPVCGDKVSGYHYGLL 145
SP S N SS I P +A +P G + +C +CGD+ SG HYG+
Sbjct: 77 SPQMNSLNSVSSSEDIKPPP----GLAGLGSYPCGSPGSLSKHICAICGDRSSGKHYGVY 132
Query: 146 TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQST 204
+CE CKGFFKRT++ YTC + C IDK QR RC +CR+QKCL +GMK E V +
Sbjct: 133 SCEGCKGFFKRTIRKDLTYTCRDNKDCQIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQ 192
Query: 205 HG 206
G
Sbjct: 193 RG 194
>MGI|MGI:1352457 [details] [associations]
symbol:Nr4a3 "nuclear receptor subfamily 4, group A, member
3" species:10090 "Mus musculus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0001707 "mesoderm formation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IMP] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IMP] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045787 "positive regulation of cell
cycle" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048752
"semicircular canal morphogenesis" evidence=IMP] [GO:0050885
"neuromuscular process controlling balance" evidence=IMP]
[GO:0060005 "vestibular reflex" evidence=IMP] [GO:2000108 "positive
regulation of leukocyte apoptotic process" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003072 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352457
GO:GO:0007411 GO:GO:0021766 GO:GO:0033554 GO:GO:0046872
GO:GO:0031100 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0043434 GO:GO:0050885 GO:GO:0043524 GO:GO:0005667
GO:GO:0001077 GO:GO:0001707 GO:GO:0030534 GO:GO:0030522
GO:GO:0045787 GO:GO:0048752 eggNOG:NOG245120
GeneTree:ENSGT00640000091364 HOGENOM:HOG000230925
HOVERGEN:HBG052663 CTD:8013 KO:K08559 OrthoDB:EOG4894MB
GO:GO:2000108 GO:GO:0060005 EMBL:AF191211 EMBL:AF191212
IPI:IPI00137203 IPI:IPI00410918 RefSeq:NP_056558.1
UniGene:Mm.247261 UniGene:Mm.487935 ProteinModelPortal:Q9QZB6
SMR:Q9QZB6 STRING:Q9QZB6 PhosphoSite:Q9QZB6 PRIDE:Q9QZB6
DNASU:18124 Ensembl:ENSMUST00000030025 GeneID:18124 KEGG:mmu:18124
UCSC:uc008suv.1 InParanoid:Q9QZB6 NextBio:293340 Bgee:Q9QZB6
CleanEx:MM_NR4A3 Genevestigator:Q9QZB6
GermOnline:ENSMUSG00000028341 Uniprot:Q9QZB6
Length = 627
Score = 261 (96.9 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 48/102 (47%), Positives = 62/102 (60%)
Query: 102 GISYHPFHTSTIAATPEHPD----TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRT 157
G++ P +S + +P P + E C VCGD + HYG+ TCE CKGFFKRT
Sbjct: 261 GLTASPTASSLLGESPSLPSPPNRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRT 320
Query: 158 VQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
VQ Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 321 VQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEV 362
>RGD|61882 [details] [associations]
symbol:Nr4a3 "nuclear receptor subfamily 4, group A, member 3"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA;ISO] [GO:0001707 "mesoderm formation"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0007411 "axon
guidance" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0030534 "adult behavior" evidence=IEA;ISO]
[GO:0031100 "organ regeneration" evidence=IEP] [GO:0033554 "cellular
response to stress" evidence=IEA;ISO] [GO:0042472 "inner ear
morphogenesis" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0043434 "response to peptide
hormone stimulus" evidence=IEP] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045787
"positive regulation of cell cycle" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA;ISO] [GO:0060005 "vestibular
reflex" evidence=IEA;ISO] [GO:2000108 "positive regulation of
leukocyte apoptotic process" evidence=IEA;ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:61882 GO:GO:0007411 GO:GO:0021766
GO:GO:0033554 GO:GO:0046872 GO:GO:0003677 GO:GO:0031100
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0043434
GO:GO:0050885 GO:GO:0043524 GO:GO:0005667 GO:GO:0001077
GO:GO:0001707 GO:GO:0030534 GO:GO:0030522 GO:GO:0045787
GO:GO:0048752 eggNOG:NOG245120 GeneTree:ENSGT00640000091364
HOGENOM:HOG000230925 HOVERGEN:HBG052663 CTD:8013 KO:K08559
OMA:PSTSMYF OrthoDB:EOG4894MB GO:GO:2000108 GO:GO:0060005
EMBL:D38530 EMBL:X86003 EMBL:DQ268830 EMBL:L19343 IPI:IPI00199318
IPI:IPI00411258 PIR:JC2493 PIR:S66671 RefSeq:NP_113816.1
UniGene:Rn.62694 ProteinModelPortal:P51179 SMR:P51179 STRING:P51179
PhosphoSite:P51179 Ensembl:ENSRNOT00000008302 GeneID:58853
KEGG:rno:58853 UCSC:RGD:61882 InParanoid:P51179 NextBio:611439
ArrayExpress:P51179 Genevestigator:P51179
GermOnline:ENSRNOG00000005964 Uniprot:P51179
Length = 628
Score = 261 (96.9 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 48/102 (47%), Positives = 62/102 (60%)
Query: 102 GISYHPFHTSTIAATPEHPD----TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRT 157
G++ P +S + +P P + E C VCGD + HYG+ TCE CKGFFKRT
Sbjct: 262 GLTASPTASSLLGESPSLPSPPNRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRT 321
Query: 158 VQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
VQ Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 322 VQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEV 363
>UNIPROTKB|P51179 [details] [associations]
symbol:Nr4a3 "Nuclear receptor subfamily 4 group A member
3" species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0048752 "semicircular canal morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0060005 "vestibular reflex"
evidence=IEA] [GO:2000108 "positive regulation of leukocyte
apoptotic process" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:61882 GO:GO:0007411 GO:GO:0021766
GO:GO:0033554 GO:GO:0046872 GO:GO:0003677 GO:GO:0031100
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0043434
GO:GO:0050885 GO:GO:0043524 GO:GO:0005667 GO:GO:0001077
GO:GO:0001707 GO:GO:0030534 GO:GO:0030522 GO:GO:0045787
GO:GO:0048752 eggNOG:NOG245120 GeneTree:ENSGT00640000091364
HOGENOM:HOG000230925 HOVERGEN:HBG052663 CTD:8013 KO:K08559
OMA:PSTSMYF OrthoDB:EOG4894MB GO:GO:2000108 GO:GO:0060005
EMBL:D38530 EMBL:X86003 EMBL:DQ268830 EMBL:L19343 IPI:IPI00199318
IPI:IPI00411258 PIR:JC2493 PIR:S66671 RefSeq:NP_113816.1
UniGene:Rn.62694 ProteinModelPortal:P51179 SMR:P51179 STRING:P51179
PhosphoSite:P51179 Ensembl:ENSRNOT00000008302 GeneID:58853
KEGG:rno:58853 UCSC:RGD:61882 InParanoid:P51179 NextBio:611439
ArrayExpress:P51179 Genevestigator:P51179
GermOnline:ENSRNOG00000005964 Uniprot:P51179
Length = 628
Score = 261 (96.9 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 48/102 (47%), Positives = 62/102 (60%)
Query: 102 GISYHPFHTSTIAATPEHPD----TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRT 157
G++ P +S + +P P + E C VCGD + HYG+ TCE CKGFFKRT
Sbjct: 262 GLTASPTASSLLGESPSLPSPPNRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRT 321
Query: 158 VQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
VQ Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 322 VQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEV 363
>ZFIN|ZDB-GENE-040724-202 [details] [associations]
symbol:nr6a1b "nuclear receptor subfamily 6, group
A, member 1b" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=ISS] [GO:0048513 "organ
development" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0030917 "midbrain-hindbrain boundary development" evidence=ISS]
[GO:0022008 "neurogenesis" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040724-202 GO:GO:0005634 GO:GO:0005737 GO:GO:0042803
GO:GO:0016477 GO:GO:0022008 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0030917
HSSP:P03372 eggNOG:NOG253308 HOGENOM:HOG000113847
HOVERGEN:HBG052664 OrthoDB:EOG4SJ5DP EMBL:AL772368 EMBL:BC097237
EMBL:DQ017610 IPI:IPI00495851 RefSeq:NP_001028892.1
UniGene:Dr.86752 ProteinModelPortal:Q4V8R7 SMR:Q4V8R7 GeneID:497167
KEGG:dre:497167 CTD:497167 NextBio:20865875 Uniprot:Q4V8R7
Length = 455
Score = 257 (95.5 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 38/75 (50%), Positives = 57/75 (76%)
Query: 121 DTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRK 180
+T +G E C +CGD+ SG HYG+++CE CKGFFKR++ NK++Y C +++C + + QR
Sbjct: 32 ETDDGGERWCLICGDRASGLHYGIISCEGCKGFFKRSICNKRIYRCNRDKNCQMSRKQRN 91
Query: 181 RCPFCRFQKCLEVGM 195
RC +CR QKCL++GM
Sbjct: 92 RCQYCRLQKCLQMGM 106
>UNIPROTKB|P51128 [details] [associations]
symbol:rxra "Retinoic acid receptor RXR-alpha" species:8355
"Xenopus laevis" [GO:0046966 "thyroid hormone receptor binding"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HOVERGEN:HBG005606 InterPro:IPR021780 Pfam:PF11825 EMBL:L11446
PIR:C41977 ProteinModelPortal:P51128 SMR:P51128 Uniprot:P51128
Length = 488
Score = 258 (95.9 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 47/97 (48%), Positives = 59/97 (60%)
Query: 113 IAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAER 170
I P HP + +C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC +
Sbjct: 142 ILKVPMHPSGAMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSK 201
Query: 171 SCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
C IDK QR RC +CR+QKCL +GMK E V + G
Sbjct: 202 DCMIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRG 238
>UNIPROTKB|K7GQM0 [details] [associations]
symbol:RXRB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00690000101777
EMBL:CT737383 Ensembl:ENSSSCT00000035096 Uniprot:K7GQM0
Length = 388
Score = 253 (94.1 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 89 PGGGS-TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGGGS D+ + H P P + LC +CGD+ SG HYG+ +C
Sbjct: 72 PGGGSGPPEDVKPPVLGVRGLHC------PPPPGGPGAGKRLCAICGDRSSGKHYGVYSC 125
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
E CKGFFKRT++ Y+C + C +DK QR RC +CR+QKCL GMK E V + G
Sbjct: 126 EGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRG 185
>UNIPROTKB|F8VZR5 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AL662824
EMBL:AL844527 EMBL:CR759733 EMBL:CR936877 EMBL:CR354565
HGNC:HGNC:10478 ChiTaRS:RXRB IPI:IPI01022583 SMR:F8VZR5
Ensembl:ENST00000546472 Ensembl:ENST00000548862
Ensembl:ENST00000549199 Ensembl:ENST00000552454
Ensembl:ENST00000552822 Uniprot:F8VZR5
Length = 389
Score = 253 (94.1 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 89 PGGGS-TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGGGS D+ + H P P + LC +CGD+ SG HYG+ +C
Sbjct: 30 PGGGSGPPEDVKPPVLGVRGLHC------PPPPGGPGAGKRLCAICGDRSSGKHYGVYSC 83
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
E CKGFFKRT++ Y+C + C +DK QR RC +CR+QKCL GMK E V + G
Sbjct: 84 EGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRG 143
>ZFIN|ZDB-GENE-990415-243 [details] [associations]
symbol:rxrab "retinoid x receptor, alpha b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISS;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-243 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
HOVERGEN:HBG005606 EMBL:U29894 IPI:IPI00481196 PIR:I50514
RefSeq:NP_571228.1 UniGene:Dr.624 ProteinModelPortal:Q90415
SMR:Q90415 STRING:Q90415 GeneID:793011 KEGG:dre:793011 CTD:793011
HOGENOM:HOG000260821 InParanoid:Q90415 OrthoDB:EOG4SJ5DV
NextBio:20931280 ArrayExpress:Q90415 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 Uniprot:Q90415
Length = 379
Score = 252 (93.8 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ +C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C IDK QR RC +CR
Sbjct: 51 KHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCMIDKRQRNRCQYCR 110
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 111 YQKCLAMGMKRE 122
>UNIPROTKB|F8VNP5 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AL662824 EMBL:AL844527 EMBL:CR759733
EMBL:CR936877 EMBL:CR354565 HGNC:HGNC:10478 ChiTaRS:RXRB
IPI:IPI01020693 SMR:F8VNP5 Ensembl:ENST00000546468
Ensembl:ENST00000547763 Ensembl:ENST00000549662
Ensembl:ENST00000550626 Ensembl:ENST00000550731 Uniprot:F8VNP5
Length = 392
Score = 253 (94.1 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 89 PGGGS-TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGGGS D+ + H P P + LC +CGD+ SG HYG+ +C
Sbjct: 30 PGGGSGPPEDVKPPVLGVRGLHC------PPPPGGPGAGKRLCAICGDRSSGKHYGVYSC 83
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
E CKGFFKRT++ Y+C + C +DK QR RC +CR+QKCL GMK E V + G
Sbjct: 84 EGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRG 143
>UNIPROTKB|Q92570 [details] [associations]
symbol:NR4A3 "Nuclear receptor subfamily 4 group A member
3" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001707 "mesoderm formation" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
[GO:0031100 "organ regeneration" evidence=IEA] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0043434 "response
to peptide hormone stimulus" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045787 "positive
regulation of cell cycle" evidence=IEA] [GO:0048752 "semicircular
canal morphogenesis" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0060005 "vestibular
reflex" evidence=IEA] [GO:2000108 "positive regulation of leukocyte
apoptotic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0004887 "thyroid
hormone receptor activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007411 GO:GO:0021766
GO:GO:0005654 GO:GO:0033554 GO:GO:0046872 GO:GO:0003677
GO:GO:0031100 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0043434
GO:GO:0050885 GO:GO:0043524 GO:GO:0005667 GO:GO:0001077
EMBL:CH471105 GO:GO:0001707 GO:GO:0030534 GO:GO:0006367
GO:GO:0045787 GO:GO:0004887 GO:GO:0048752 MIM:612219 EMBL:AL358937
eggNOG:NOG245120 HOVERGEN:HBG052663 EMBL:D78579 EMBL:U12767
EMBL:S81243 EMBL:X89894 EMBL:AL359710 EMBL:D85241 EMBL:D85242
IPI:IPI00293038 IPI:IPI00328269 IPI:IPI00334557 PIR:S71930
RefSeq:NP_008912.2 RefSeq:NP_775291.1 RefSeq:NP_775292.1
UniGene:Hs.279522 ProteinModelPortal:Q92570 SMR:Q92570
STRING:Q92570 PhosphoSite:Q92570 DMDM:90110039 PaxDb:Q92570
PRIDE:Q92570 DNASU:8013 Ensembl:ENST00000330847
Ensembl:ENST00000338488 Ensembl:ENST00000395097 GeneID:8013
KEGG:hsa:8013 UCSC:uc004bae.3 UCSC:uc004baf.1 UCSC:uc022bky.1
CTD:8013 GeneCards:GC09P102584 HGNC:HGNC:7982 HPA:HPA043360
MIM:600542 neXtProt:NX_Q92570 PharmGKB:PA31763 InParanoid:Q92570
KO:K08559 OMA:PSTSMYF OrthoDB:EOG4894MB ChEMBL:CHEMBL1961792
ChiTaRS:NR4A3 GenomeRNAi:8013 NextBio:30567 ArrayExpress:Q92570
Bgee:Q92570 CleanEx:HS_NR4A3 CleanEx:HS_TEC Genevestigator:Q92570
GermOnline:ENSG00000119508 GO:GO:2000108 GO:GO:0060005
Uniprot:Q92570
Length = 626
Score = 260 (96.6 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 48/102 (47%), Positives = 62/102 (60%)
Query: 102 GISYHPFHTSTIAATPEHPD----TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRT 157
G++ P +S + +P P + E C VCGD + HYG+ TCE CKGFFKRT
Sbjct: 260 GLTPSPTASSLLGESPSLPSPPSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRT 319
Query: 158 VQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
VQ Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 320 VQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEV 361
>WB|WBGene00003678 [details] [associations]
symbol:nhr-88 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0019915 "lipid storage"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0019915
GeneTree:ENSGT00670000097927 EMBL:FO080841 RefSeq:NP_001022235.1
ProteinModelPortal:H2KZA1 SMR:H2KZA1 PRIDE:H2KZA1
EnsemblMetazoa:K08A2.5a.1 EnsemblMetazoa:K08A2.5a.2
EnsemblMetazoa:K08A2.5a.3 GeneID:173641 KEGG:cel:CELE_K08A2.5
CTD:173641 WormBase:K08A2.5a OMA:LCNKSTI Uniprot:H2KZA1
Length = 593
Score = 232 (86.7 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C VCGD+ +G HYG++ C CKGFF+RT+++++ YTC + C IDK QR C +CRFQ+
Sbjct: 36 CMVCGDRSAGKHYGVMACYGCKGFFRRTIRSQQTYTCRFTQKCAIDKDQRNACRYCRFQR 95
Query: 190 CLEVGMKLE 198
CL VGM+ E
Sbjct: 96 CLTVGMEPE 104
Score = 51 (23.0 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 193 VGMKLEVSSQSTHGVVVIWSPHS-PSISENL 222
+G L+ SS S G V ++PHS P IS N+
Sbjct: 536 LGGSLDDSSSSGTGSVGSFAPHSAPPISNNV 566
>UNIPROTKB|E1B7S6 [details] [associations]
symbol:NR4A3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000108 "positive regulation of leukocyte apoptotic
process" evidence=IEA] [GO:0060005 "vestibular reflex"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0045787 "positive regulation of
cell cycle" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA] [GO:0033554 "cellular response to
stress" evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007411 GO:GO:0021766
GO:GO:0033554 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0050885 GO:GO:0043524 GO:GO:0005667
GO:GO:0001077 GO:GO:0001707 GO:GO:0030534 GO:GO:0030522
GO:GO:0045787 GO:GO:0048752 GeneTree:ENSGT00640000091364
OMA:PSTSMYF GO:GO:2000108 GO:GO:0060005 EMBL:DAAA02023278
EMBL:DAAA02023279 IPI:IPI00701881 Ensembl:ENSBTAT00000002429
Uniprot:E1B7S6
Length = 637
Score = 260 (96.6 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 48/102 (47%), Positives = 62/102 (60%)
Query: 102 GISYHPFHTSTIAATPEHPD----TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRT 157
G++ P +S + +P P + E C VCGD + HYG+ TCE CKGFFKRT
Sbjct: 271 GLTASPTASSLLGESPSLPSPPSRSSASGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRT 330
Query: 158 VQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
VQ Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 331 VQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEV 372
>ZFIN|ZDB-GENE-040616-3 [details] [associations]
symbol:esrrd "estrogen-related receptor delta"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040616-3 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00700000104391 EMBL:CABZ01076181
EMBL:CABZ01076182 IPI:IPI00898096 Ensembl:ENSDART00000125432
Bgee:F1Q8K8 Uniprot:F1Q8K8
Length = 431
Score = 255 (94.8 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 49/108 (45%), Positives = 63/108 (58%)
Query: 93 STNMDLSSAGISYHPF-HTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCK 151
S+++ SSA + +HP H + P G + LC VCGD SGYHYG+ +CE+CK
Sbjct: 61 SSSISSSSAPVLFHPAGHPEHALISDYIPSLNPGPKRLCLVCGDFASGYHYGVASCEACK 120
Query: 152 GFFKRTVQNKKV-YTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
FFKRT+Q + Y+C C I K +RK C CRFQKCL GM E
Sbjct: 121 AFFKRTIQAGNIEYSCPVVNDCEITKRRRKSCQACRFQKCLRAGMMRE 168
>ZFIN|ZDB-GENE-040704-11 [details] [associations]
symbol:nr4a1 "nuclear receptor subfamily 4, group A,
member 1" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040704-11
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AY542372 UniGene:Dr.9243
ProteinModelPortal:I6LBI5 Uniprot:I6LBI5
Length = 580
Score = 259 (96.2 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 46/75 (61%), Positives = 51/75 (68%)
Query: 125 GIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPF 184
G E C VCGD S HYG+ TCE CKGFFKRTVQ Y C+A + C +DK +R RC F
Sbjct: 234 GNEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRRRNRCQF 293
Query: 185 CRFQKCLEVGMKLEV 199
CRFQKCL VGM EV
Sbjct: 294 CRFQKCLAVGMVKEV 308
>UNIPROTKB|E2RD69 [details] [associations]
symbol:RXRG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0004886 "9-cis
retinoic acid receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GeneTree:ENSGT00690000101777 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:AAEX03018391
RefSeq:XP_536146.2 ProteinModelPortal:E2RD69
Ensembl:ENSCAFT00000021179 GeneID:478989 KEGG:cfa:478989
NextBio:20854245 Uniprot:E2RD69
Length = 463
Score = 256 (95.2 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 42/82 (51%), Positives = 57/82 (69%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 126 YPSASPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLMYTCRDNKDCLIDK 185
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
QR RC +CR+QKCL +GMK E
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKRE 207
>ZFIN|ZDB-GENE-980526-436 [details] [associations]
symbol:rxrba "retinoid x receptor, beta a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-436 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 HOVERGEN:HBG005606 GeneTree:ENSGT00690000101777
EMBL:BX890617 HOGENOM:HOG000260821 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 EMBL:AL672176 EMBL:BC054649 EMBL:U29942 EMBL:U93483
IPI:IPI00758810 PIR:I50517 RefSeq:NP_571350.1 UniGene:Dr.351
ProteinModelPortal:Q7SYN5 SMR:Q7SYN5 STRING:Q7SYN5
Ensembl:ENSDART00000009755 Ensembl:ENSDART00000102075 GeneID:30530
KEGG:dre:30530 CTD:30530 InParanoid:Q7SYN5 KO:K08525
NextBio:20806913 ArrayExpress:Q7SYN5 Bgee:Q7SYN5 Uniprot:Q7SYN5
Length = 471
Score = 256 (95.2 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 45/93 (48%), Positives = 60/93 (64%)
Query: 107 PFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTC 166
PF +++ P + + LC +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC
Sbjct: 104 PFGLKPLSSHSPGPMVSQ--KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTC 161
Query: 167 VAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
+ C +DK QR RC +CR+QKCL +GMK EV
Sbjct: 162 RDNKDCLVDKRQRNRCQYCRYQKCLAMGMKREV 194
>ZFIN|ZDB-GENE-980526-531 [details] [associations]
symbol:rarga "retinoic acid receptor gamma a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0060037 "pharyngeal system development"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-980526-531 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:BX465864 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:BX546466 IPI:IPI00817162
Ensembl:ENSDART00000103158 ArrayExpress:F1RAM8 Bgee:F1RAM8
Uniprot:F1RAM8
Length = 507
Score = 257 (95.5 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 51/123 (41%), Positives = 70/123 (56%)
Query: 78 NMVDNSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEG--IEELCPVCGD 135
+++ NS LF G ++ A +S TS+ P P + + C VC D
Sbjct: 34 DLLANSNLF---GRFGADLPKEMAALSVETQSTSSEEMVPSSPSPPPPPRVYKPCFVCQD 90
Query: 136 KVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
K SGYHYG+ +CE CKGFF+R++Q VYTC +++C I+K R RC +CR QKC EVGM
Sbjct: 91 KSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQINKVTRNRCQYCRLQKCFEVGM 150
Query: 196 KLE 198
E
Sbjct: 151 SKE 153
>UNIPROTKB|F1MBX3 [details] [associations]
symbol:ESRRA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 CTD:2101 KO:K08552 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:DAAA02063533 IPI:IPI00695134
RefSeq:NP_001178302.1 UniGene:Bt.15797 PRIDE:F1MBX3
Ensembl:ENSBTAT00000036417 GeneID:507834 KEGG:bta:507834
NextBio:20868240 Uniprot:F1MBX3
Length = 422
Score = 236 (88.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 41/72 (56%), Positives = 48/72 (66%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 76 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACR 135
Query: 187 FQKCLEVGMKLE 198
F KCL VGM E
Sbjct: 136 FTKCLRVGMLKE 147
Score = 38 (18.4 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 98 LSSAGISYHPFHTSTIAATPEHPDTKEGIEE 128
+SS + P + I A P PD+ +G E
Sbjct: 1 MSSQVVGIEPLY---IKAEPASPDSPKGSSE 28
>UNIPROTKB|Q6QMY5 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AY533243 RefSeq:NP_001002936.1 UniGene:Cfa.3916
HSSP:P11474 ProteinModelPortal:Q6QMY5 SMR:Q6QMY5 STRING:Q6QMY5
GeneID:403169 KEGG:cfa:403169 CTD:2101 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344 InParanoid:Q6QMY5 KO:K08552
OrthoDB:EOG48KRBN NextBio:20816913 Uniprot:Q6QMY5
Length = 422
Score = 236 (88.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 41/72 (56%), Positives = 48/72 (66%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 76 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACR 135
Query: 187 FQKCLEVGMKLE 198
F KCL VGM E
Sbjct: 136 FTKCLRVGMLKE 147
Score = 38 (18.4 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 98 LSSAGISYHPFHTSTIAATPEHPDTKEGIEE 128
+SS + P + I A P PD+ +G E
Sbjct: 1 MSSQVVGIEPLY---IKAEPASPDSPKGSSE 28
>UNIPROTKB|F1RQP2 [details] [associations]
symbol:ESRRA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:FP312658
Ensembl:ENSSSCT00000014241 Uniprot:F1RQP2
Length = 422
Score = 236 (88.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 41/72 (56%), Positives = 48/72 (66%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 76 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACR 135
Query: 187 FQKCLEVGMKLE 198
F KCL VGM E
Sbjct: 136 FTKCLRVGMLKE 147
Score = 38 (18.4 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 98 LSSAGISYHPFHTSTIAATPEHPDTKEGIEE 128
+SS + P + I A P PD+ +G E
Sbjct: 1 MSSQVVGIEPLY---IKAEPASPDSPKGSSE 28
>MGI|MGI:1346831 [details] [associations]
symbol:Esrra "estrogen related receptor, alpha"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0030278 "regulation of ossification" evidence=ISO] [GO:0042127
"regulation of cell proliferation" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISO] [GO:0045670 "regulation of osteoclast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051216 "cartilage development" evidence=ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1346831
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0042127 GO:GO:0051216 GO:GO:0045670
GO:GO:0045667 CTD:2101 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 KO:K08552 OrthoDB:EOG48KRBN OMA:PLPFPGS
EMBL:U85259 EMBL:AK156371 EMBL:BC138586 EMBL:BC171958
IPI:IPI00762735 RefSeq:NP_031979.2 UniGene:Mm.386776
ProteinModelPortal:O08580 SMR:O08580 IntAct:O08580 STRING:O08580
PhosphoSite:O08580 PRIDE:O08580 Ensembl:ENSMUST00000025906
GeneID:26379 KEGG:mmu:26379 GeneTree:ENSGT00700000104391
InParanoid:B2RRU9 ChEMBL:CHEMBL1914280 NextBio:304289 Bgee:O08580
CleanEx:MM_ESRRA Genevestigator:O08580
GermOnline:ENSMUSG00000024955 Uniprot:O08580
Length = 422
Score = 236 (88.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 41/72 (56%), Positives = 48/72 (66%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 76 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACR 135
Query: 187 FQKCLEVGMKLE 198
F KCL VGM E
Sbjct: 136 FTKCLRVGMLKE 147
Score = 38 (18.4 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 98 LSSAGISYHPFHTSTIAATPEHPDTKEGIEE 128
+SS + P + I A P PD+ +G E
Sbjct: 1 MSSQVVGIEPLY---IKAEPASPDSPKGSSE 28
>RGD|1583866 [details] [associations]
symbol:Esrra "estrogen related receptor, alpha" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0030278 "regulation of ossification"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045670 "regulation of
osteoclast differentiation" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:1583866 GO:GO:0005634 GO:GO:0045893 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0042127 GO:GO:0051216 GO:GO:0045670
GO:GO:0045667 HSSP:P11474 CTD:2101 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552 OrthoDB:EOG48KRBN
OMA:PLPFPGS GeneTree:ENSGT00700000104391 EMBL:AY280663
EMBL:BC104701 IPI:IPI00371457 RefSeq:NP_001008511.2
UniGene:Rn.130171 ProteinModelPortal:Q5QJV7 SMR:Q5QJV7
STRING:Q5QJV7 PhosphoSite:Q5QJV7 PRIDE:Q5QJV7
Ensembl:ENSRNOT00000028697 GeneID:293701 KEGG:rno:293701
UCSC:RGD:1583866 InParanoid:Q5QJV7 NextBio:636801
Genevestigator:Q5QJV7 Uniprot:Q5QJV7
Length = 422
Score = 236 (88.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 41/72 (56%), Positives = 48/72 (66%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 76 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACR 135
Query: 187 FQKCLEVGMKLE 198
F KCL VGM E
Sbjct: 136 FTKCLRVGMLKE 147
Score = 38 (18.4 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 98 LSSAGISYHPFHTSTIAATPEHPDTKEGIEE 128
+SS + P + I A P PD+ +G E
Sbjct: 1 MSSQVVGIEPLY---IKAEPASPDSPKGSSE 28
>MGI|MGI:1352453 [details] [associations]
symbol:Nr2f6 "nuclear receptor subfamily 2, group F, member
6" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IMP] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048666 "neuron development" evidence=IMP]
[GO:0050965 "detection of temperature stimulus involved in sensory
perception of pain" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352453
GO:GO:0005634 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0000122 GO:GO:0048666 GO:GO:0030522 EMBL:CH466569
GO:GO:0043153 HOGENOM:HOG000260820 HOVERGEN:HBG005606 HSSP:P03372
CTD:2063 eggNOG:NOG277317 KO:K08549 OMA:DPNGGTN OrthoDB:EOG4FN4HT
EMBL:X76654 EMBL:L25674 EMBL:AK131941 EMBL:AK171552 EMBL:BC008138
IPI:IPI00117237 PIR:I48734 PIR:I49640 RefSeq:NP_034280.2
UniGene:Mm.28989 ProteinModelPortal:P43136 SMR:P43136 IntAct:P43136
STRING:P43136 PhosphoSite:P43136 PaxDb:P43136 PRIDE:P43136
Ensembl:ENSMUST00000002466 GeneID:13864 KEGG:mmu:13864
InParanoid:Q922G8 NextBio:284756 Bgee:P43136 CleanEx:MM_NR2F6
Genevestigator:P43136 GermOnline:ENSMUSG00000002393 Uniprot:P43136
Length = 390
Score = 252 (93.8 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 52/118 (44%), Positives = 69/118 (58%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPE------HPDTKE--GIEELCPVCGDKVSGY 140
PGG + +D AG SY P T +A+P P +E G++ C VCGDK SG
Sbjct: 11 PGGDTNGVD--KAGGSY-PRATEDDSASPPGATSDAEPGDEERPGLQVDCVVCGDKSSGK 67
Query: 141 HYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
HYG+ TCE CK FFKR+++ YTC + R C ID+ R +C +CR +KC VGM+ E
Sbjct: 68 HYGVFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKE 125
>UNIPROTKB|P11474 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0045667
"regulation of osteoblast differentiation" evidence=IEA]
[GO:0045670 "regulation of osteoclast differentiation"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0005496 GO:GO:0046872 GO:GO:0003677 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0042127
GO:GO:0051216 GO:GO:0045670 GO:GO:0006367 GO:GO:0045667 CTD:2101
eggNOG:NOG282629 HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552
OrthoDB:EOG48KRBN EMBL:X51416 EMBL:L38487 EMBL:AP001453
IPI:IPI00005717 IPI:IPI00792208 PIR:A29345 RefSeq:NP_004442.3
UniGene:Hs.110849 PDB:1XB7 PDB:2PJL PDB:3D24 PDB:3K6P PDBsum:1XB7
PDBsum:2PJL PDBsum:3D24 PDBsum:3K6P ProteinModelPortal:P11474
SMR:P11474 DIP:DIP-35053N IntAct:P11474 MINT:MINT-215609
STRING:P11474 PhosphoSite:P11474 DMDM:215274146 PaxDb:P11474
PRIDE:P11474 DNASU:2101 Ensembl:ENST00000000442
Ensembl:ENST00000405666 Ensembl:ENST00000406310 GeneID:2101
KEGG:hsa:2101 UCSC:uc001nzq.1 UCSC:uc001nzr.1 GeneCards:GC11P064073
HGNC:HGNC:3471 MIM:601998 neXtProt:NX_P11474 PharmGKB:PA27887
OMA:PLPFPGS BindingDB:P11474 ChEMBL:CHEMBL3429
EvolutionaryTrace:P11474 GenomeRNAi:2101 NextBio:8503
ArrayExpress:P11474 Bgee:P11474 CleanEx:HS_ESRRA
Genevestigator:P11474 GermOnline:ENSG00000173153 Uniprot:P11474
Length = 423
Score = 236 (88.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 41/72 (56%), Positives = 48/72 (66%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 76 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACR 135
Query: 187 FQKCLEVGMKLE 198
F KCL VGM E
Sbjct: 136 FTKCLRVGMLKE 147
Score = 38 (18.4 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 98 LSSAGISYHPFHTSTIAATPEHPDTKEGIEE 128
+SS + P + I A P PD+ +G E
Sbjct: 1 MSSQVVGIEPLY---IKAEPASPDSPKGSSE 28
>ZFIN|ZDB-GENE-990415-184 [details] [associations]
symbol:nr4a2a "nuclear receptor subfamily 4, group
A, member 2a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP] [GO:0021953 "central nervous system
neuron differentiation" evidence=IGI] [GO:0021884 "forebrain neuron
development" evidence=IMP] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003073
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-990415-184 GO:GO:0005634 GO:GO:0046872 GO:GO:0071542
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GO:GO:0021884 GeneTree:ENSGT00640000091364 EMBL:CU179638
IPI:IPI00932496 ProteinModelPortal:F1RER4
Ensembl:ENSDART00000109954 Bgee:F1RER4 Uniprot:F1RER4
Length = 635
Score = 259 (96.2 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 50/96 (52%), Positives = 60/96 (62%)
Query: 106 HPFHTSTIAATPEH--PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKV 163
H S + + P P T EG LC VCGD + HYG+ TCE CKGFFKRTVQ
Sbjct: 278 HQLMDSQVPSPPSRGSPST-EG---LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAK 333
Query: 164 YTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
Y C+A ++C +DK +R RC +CRFQKCL VGM EV
Sbjct: 334 YVCLANKNCPVDKRRRNRCQYCRFQKCLVVGMVKEV 369
>UNIPROTKB|P13631 [details] [associations]
symbol:RARG "Retinoic acid receptor gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003430 "growth plate cartilage chondrocyte growth"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0031641 "regulation of
myelination" evidence=IEA] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0060534 "trachea
cartilage development" evidence=IEA] [GO:0060740 "prostate gland
epithelium morphogenesis" evidence=IEA] [GO:0061037 "negative
regulation of cartilage development" evidence=IEA] [GO:0070384
"Harderian gland development" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032526 "response
to retinoic acid" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IDA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=TAS] [GO:0008361 "regulation of cell
size" evidence=TAS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=ISS] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0043068 "positive regulation
of programmed cell death" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0046965 "retinoid X receptor binding"
evidence=ISS] [GO:0048048 "embryonic eye morphogenesis"
evidence=ISS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0016021
GO:GO:0008285 GO:GO:0009952 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 EMBL:CH471054
GO:GO:0003700 GO:GO:0008361 Pathway_Interaction_DB:rxr_vdr_pathway
GO:GO:0005667 GO:GO:0000122 GO:GO:0043065 GO:GO:0032526
GO:GO:0035264 GO:GO:0035116
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
GO:GO:0048384 GO:GO:0048048 DrugBank:DB00459 GO:GO:0060740
GO:GO:0006367 GO:GO:0060070 GO:GO:0046965 GO:GO:0032331
HOVERGEN:HBG005606 GO:GO:0003708 EMBL:AC021072 CTD:5916
GO:GO:0070384 GO:GO:0061037 DrugBank:DB00523 DrugBank:DB00926
eggNOG:NOG297448 OrthoDB:EOG4F7NK7 DrugBank:DB00210
DrugBank:DB00799 EMBL:M24857 EMBL:M57707 EMBL:M38258 EMBL:AK297023
EMBL:AK297277 EMBL:AK316259 EMBL:AC073573 EMBL:BC093727
EMBL:BC093729 EMBL:M32074 EMBL:X57280 EMBL:AJ250835 EMBL:AY013703
EMBL:AY013704 IPI:IPI00427809 IPI:IPI00465344 IPI:IPI00788710
PIR:A33903 PIR:C35991 RefSeq:NP_000957.1 RefSeq:NP_001036193.1
RefSeq:NP_001230659.1 RefSeq:NP_001230661.1 UniGene:Hs.1497
UniGene:Hs.733399 PDB:1EXA PDB:1EXX PDB:1FCX PDB:1FCY PDB:1FCZ
PDB:1FD0 PDB:2LBD PDB:3LBD PDB:4LBD PDBsum:1EXA PDBsum:1EXX
PDBsum:1FCX PDBsum:1FCY PDBsum:1FCZ PDBsum:1FD0 PDBsum:2LBD
PDBsum:3LBD PDBsum:4LBD ProteinModelPortal:P13631 SMR:P13631
IntAct:P13631 STRING:P13631 PhosphoSite:P13631 DMDM:133498
PaxDb:P13631 PRIDE:P13631 DNASU:5916 Ensembl:ENST00000327550
Ensembl:ENST00000338561 Ensembl:ENST00000394426
Ensembl:ENST00000425354 Ensembl:ENST00000543726 GeneID:5916
KEGG:hsa:5916 UCSC:uc001sce.3 GeneCards:GC12M053604
H-InvDB:HIX0129677 HGNC:HGNC:9866 MIM:180190 neXtProt:NX_P13631
PharmGKB:PA34227 InParanoid:P13631 KO:K08529 OMA:RSPQPDQ
PhylomeDB:P13631 BindingDB:P13631 ChEMBL:CHEMBL2003
EvolutionaryTrace:P13631 GenomeRNAi:5916 NextBio:23030
ArrayExpress:P13631 Bgee:P13631 CleanEx:HS_RARG
Genevestigator:P13631 GermOnline:ENSG00000172819 GO:GO:0003430
GO:GO:0060534 Uniprot:P13631
Length = 454
Score = 255 (94.8 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 48/111 (43%), Positives = 64/111 (57%)
Query: 90 GGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTC 147
G G ++ A +S TS+ P P + + C VC DK SGYHYG+ +C
Sbjct: 48 GLGQPDLPKEMASLSVETQSTSSEEMVPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSC 107
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
E CKGFF+R++Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 108 EGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 158
>UNIPROTKB|Q08DD4 [details] [associations]
symbol:RARG "RARG protein" species:9913 "Bos taurus"
[GO:0070384 "Harderian gland development" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IEA]
[GO:0060534 "trachea cartilage development" evidence=IEA]
[GO:0048048 "embryonic eye morphogenesis" evidence=IEA] [GO:0046965
"retinoid X receptor binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0008285
GO:GO:0009952 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0005667 GO:GO:0000122 GO:GO:0043065
GO:GO:0032526 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 HOVERGEN:HBG005606 GO:GO:0003708
CTD:5916 GO:GO:0070384 GO:GO:0061037 eggNOG:NOG297448
GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7
KO:K08529 OMA:RSPQPDQ GO:GO:0003430 GO:GO:0060534 EMBL:DAAA02012865
EMBL:BC123809 IPI:IPI00707092 RefSeq:NP_001124228.1
UniGene:Bt.53782 SMR:Q08DD4 STRING:Q08DD4
Ensembl:ENSBTAT00000009984 GeneID:540425 KEGG:bta:540425
InParanoid:Q08DD4 NextBio:20878630 Uniprot:Q08DD4
Length = 458
Score = 255 (94.8 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 48/111 (43%), Positives = 64/111 (57%)
Query: 90 GGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTC 147
G G ++ A +S TS+ P P + + C VC DK SGYHYG+ +C
Sbjct: 48 GLGQPDLPKEMASLSVETQSTSSEEMVPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSC 107
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
E CKGFF+R++Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 108 EGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 158
>UNIPROTKB|F1PN60 [details] [associations]
symbol:RARG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708 CTD:5916
GeneTree:ENSGT00680000099662 KO:K08529 OMA:RSPQPDQ
EMBL:AAEX03014990 EMBL:AAEX03014987 EMBL:AAEX03014988
EMBL:AAEX03014989 RefSeq:XP_849260.2 Ensembl:ENSCAFT00000011309
GeneID:486508 KEGG:cfa:486508 Uniprot:F1PN60
Length = 458
Score = 255 (94.8 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 48/111 (43%), Positives = 64/111 (57%)
Query: 90 GGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTC 147
G G ++ A +S TS+ P P + + C VC DK SGYHYG+ +C
Sbjct: 48 GLGQPDLPKEMASLSVETQSTSSEEMVPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSC 107
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
E CKGFF+R++Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 108 EGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 158
>MGI|MGI:97858 [details] [associations]
symbol:Rarg "retinoic acid receptor, gamma" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0002063 "chondrocyte
development" evidence=IMP] [GO:0003417 "growth plate cartilage
development" evidence=IGI] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IC;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003708 "retinoic acid
receptor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0010468 "regulation of gene expression" evidence=IGI]
[GO:0010628 "positive regulation of gene expression" evidence=IDA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IMP] [GO:0032526 "response to retinoic acid" evidence=ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IGI]
[GO:0035264 "multicellular organism growth" evidence=IGI]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IGI] [GO:0043068 "positive regulation of programmed cell
death" evidence=IGI] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IC;IGI;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046965 "retinoid
X receptor binding" evidence=IMP] [GO:0048048 "embryonic eye
morphogenesis" evidence=IGI] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO;IMP] [GO:0048608 "reproductive
structure development" evidence=IMP] [GO:0048732 "gland
development" evidence=IMP] [GO:0060173 "limb development"
evidence=IMP] [GO:0060348 "bone development" evidence=IMP]
[GO:0060349 "bone morphogenesis" evidence=IGI;IMP] [GO:0060429
"epithelium development" evidence=IMP] [GO:0060534 "trachea
cartilage development" evidence=IMP] [GO:0060740 "prostate gland
epithelium morphogenesis" evidence=IMP] [GO:0061037 "negative
regulation of cartilage development" evidence=IMP] [GO:0070384
"Harderian gland development" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:97858
GO:GO:0008285 GO:GO:0009952 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0005667 GO:GO:0000122 GO:GO:0043065 GO:GO:0032526
GO:GO:0035264 GO:GO:0035116 GO:GO:0048384 GO:GO:0048048
GO:GO:0060740 GO:GO:0046965 GO:GO:0032331 HOVERGEN:HBG005606
GO:GO:0003708 CTD:5916 GO:GO:0070384 GO:GO:0061037 eggNOG:NOG297448
GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7
KO:K08529 OMA:RSPQPDQ GO:GO:0003430 GO:GO:0060534 EMBL:X15848
EMBL:M34475 EMBL:M34476 EMBL:AK148064 EMBL:BC012923 EMBL:BC013709
EMBL:M32068 EMBL:M32069 EMBL:M32070 IPI:IPI00122863 IPI:IPI00320178
IPI:IPI00885347 PIR:B34714 PIR:S05052 RefSeq:NP_001036192.1
RefSeq:NP_035374.3 UniGene:Mm.1273 ProteinModelPortal:P18911
SMR:P18911 DIP:DIP-42822N MINT:MINT-2834553 STRING:P18911
PhosphoSite:P18911 PRIDE:P18911 Ensembl:ENSMUST00000043172
Ensembl:ENSMUST00000063339 GeneID:19411 KEGG:mmu:19411
UCSC:uc007she.1 InParanoid:P18911 BindingDB:P18911
ChEMBL:CHEMBL4177 NextBio:296533 Bgee:P18911 CleanEx:MM_RARG
Genevestigator:P18911 GermOnline:ENSMUSG00000001288 Uniprot:P18911
Length = 458
Score = 255 (94.8 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 48/111 (43%), Positives = 64/111 (57%)
Query: 90 GGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEG--IEELCPVCGDKVSGYHYGLLTC 147
G G ++ A +S TS+ P P + + C VC DK SGYHYG+ +C
Sbjct: 48 GLGQPDLPKEMASLSVETQSTSSEEMVPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSC 107
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
E CKGFF+R++Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 108 EGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 158
>UNIPROTKB|Q6GZ69 [details] [associations]
symbol:NR1I3 "Nuclear receptor subfamily 1 group I member
3" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001628 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10
GO:GO:0003700 GO:GO:0006351 EMBL:AL590714 UniGene:Hs.349642
HGNC:HGNC:7969 EMBL:AY572826 IPI:IPI00434579 SMR:Q6GZ69
STRING:Q6GZ69 Ensembl:ENST00000502848 HOGENOM:HOG000142424
HOVERGEN:HBG061655 Uniprot:Q6GZ69
Length = 119
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 42/76 (55%), Positives = 51/76 (67%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C VCGD+ +GYH+ LTCE CKGFF+RTV TC SC + KTQR+ CP CR QK
Sbjct: 11 CVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQK 70
Query: 190 CLEVGMKLEVSSQSTH 205
CL+ GM+ + SS S H
Sbjct: 71 CLDAGMRKDTSSSSVH 86
>ZFIN|ZDB-GENE-070314-2 [details] [associations]
symbol:rxraa "retinoid X receptor, alpha a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-070314-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00690000101777
InterPro:IPR021780 Pfam:PF11825 EMBL:CU062650 EMBL:BX001031
IPI:IPI00994409 ProteinModelPortal:F1R1Y8
Ensembl:ENSDART00000124173 ArrayExpress:F1R1Y8 Bgee:F1R1Y8
Uniprot:F1R1Y8
Length = 495
Score = 256 (95.2 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 50/113 (44%), Positives = 66/113 (58%)
Query: 88 SPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPD-TKEGI-EELCPVCGDKVSGYHYGLL 145
SP S +SS+ P + + P P T + + +C +CGD+ SG HYG+
Sbjct: 124 SPQLNSPMNSVSSSEDIKPPLGLNGVMKVPAQPSGTPLSLTKHICAICGDRSSGKHYGVY 183
Query: 146 TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
+CE CKGFFKRTV+ YTC + C IDK QR RC +CR+QKCL +GMK E
Sbjct: 184 SCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKRE 236
>UNIPROTKB|A5D9P5 [details] [associations]
symbol:RXRB "Retinoid X receptor, beta" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 GeneTree:ENSGT00690000101777
InterPro:IPR021780 Pfam:PF11825 EMBL:CT737383 EMBL:BX640585
ProteinModelPortal:A5D9P5 SMR:A5D9P5 STRING:A5D9P5
Ensembl:ENSSSCT00000036293 Uniprot:A5D9P5
Length = 414
Score = 253 (94.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 89 PGGGS-TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGGGS D+ + H P P + LC +CGD+ SG HYG+ +C
Sbjct: 46 PGGGSGPPEDVKPPVLGVRGLHC------PPPPGGPGAGKRLCAICGDRSSGKHYGVYSC 99
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
E CKGFFKRT++ Y+C + C +DK QR RC +CR+QKCL GMK E V + G
Sbjct: 100 EGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRG 159
>UNIPROTKB|E1C6K9 [details] [associations]
symbol:NR4A2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001975 "response to amphetamine"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0016265 "death"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0021986 "habenula development"
evidence=IEA] [GO:0031668 "cellular response to extracellular
stimulus" evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IEA] [GO:0042416 "dopamine biosynthetic process"
evidence=IEA] [GO:0042551 "neuron maturation" evidence=IEA]
[GO:0043085 "positive regulation of catalytic activity"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0043085 GO:GO:0033554 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944
GO:GO:0001975 GO:GO:0043524 GO:GO:0042416 GO:GO:0042053
GO:GO:0016265 GO:GO:0030522 GO:GO:0043576 KO:K08558
GeneTree:ENSGT00640000091364 CTD:4929 OMA:MWEDPGS EMBL:AADN02017061
IPI:IPI00579183 RefSeq:XP_422166.2 Ensembl:ENSGALT00000020478
GeneID:424320 KEGG:gga:424320 NextBio:20826667 Uniprot:E1C6K9
Length = 598
Score = 257 (95.5 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 44/73 (60%), Positives = 52/73 (71%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
E LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +DK +R RC +CR
Sbjct: 260 EGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCR 319
Query: 187 FQKCLEVGMKLEV 199
FQKCL VGM EV
Sbjct: 320 FQKCLAVGMVKEV 332
>ZFIN|ZDB-GENE-990415-68 [details] [associations]
symbol:esrra "estrogen-related receptor alpha"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0042074 "cell
migration involved in gastrulation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-68
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0042074 CTD:2101
eggNOG:NOG282629 HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552
OMA:PLPFPGS GeneTree:ENSGT00700000104391 HSSP:P20393 EMBL:BX465841
EMBL:AY556395 IPI:IPI00482428 RefSeq:NP_998120.1 UniGene:Dr.30382
SMR:Q6Q6F6 Ensembl:ENSDART00000100658 GeneID:405891 KEGG:dre:405891
InParanoid:Q6Q6F6 NextBio:20817852 Uniprot:Q6Q6F6
Length = 436
Score = 237 (88.5 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 41/72 (56%), Positives = 49/72 (68%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 97 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGNIEYSCPASNECEITKRRRKACQACR 156
Query: 187 FQKCLEVGMKLE 198
F KCL+VGM E
Sbjct: 157 FTKCLKVGMLKE 168
Score = 36 (17.7 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 88 SPGGGSTNMDLSSAG 102
SPGG S++ S G
Sbjct: 31 SPGGASSDSSQSGGG 45
>UNIPROTKB|P51129 [details] [associations]
symbol:rxrg "Retinoic acid receptor RXR-gamma" species:8355
"Xenopus laevis" [GO:0043565 "sequence-specific DNA binding"
evidence=IPI] [GO:0046966 "thyroid hormone receptor binding"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HOVERGEN:HBG005606 InterPro:IPR021780 Pfam:PF11825 EMBL:L11443
PIR:D41977 ProteinModelPortal:P51129 SMR:P51129 Uniprot:P51129
Length = 470
Score = 254 (94.5 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ +C +CGD+ SG HYG+ +CE CKGFFKRT++ VYTC + C IDK QR RC +CR
Sbjct: 143 KHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLVYTCRDSKDCLIDKRQRNRCQYCR 202
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 203 YQKCLAMGMKRE 214
>UNIPROTKB|D6RBI3 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7 HGNC:HGNC:9865 EMBL:AC093416
EMBL:AC092422 EMBL:AC098477 EMBL:AC133141 EMBL:AC133797
IPI:IPI00967715 ProteinModelPortal:D6RBI3 SMR:D6RBI3
Ensembl:ENST00000383772 ArrayExpress:D6RBI3 Bgee:D6RBI3
Uniprot:D6RBI3
Length = 402
Score = 251 (93.4 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 48/110 (43%), Positives = 63/110 (57%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
P G ST S A I + + +P P + + C VC DK SGYHYG+ CE
Sbjct: 50 PSGCSTP---SPATIETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACE 106
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
CKGFF+R++Q +YTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 107 GCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKE 156
>UNIPROTKB|C9JKS0 [details] [associations]
symbol:NR2C2 "Nuclear receptor subfamily 2 group C member
2" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001628 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10
GO:GO:0003700 GO:GO:0006351 EMBL:AC090954 EMBL:AC090937
HGNC:HGNC:7972 ChiTaRS:NR2C2 IPI:IPI00902492
ProteinModelPortal:C9JKS0 SMR:C9JKS0 STRING:C9JKS0
Ensembl:ENST00000437120 HOGENOM:HOG000213778 ArrayExpress:C9JKS0
Bgee:C9JKS0 Uniprot:C9JKS0
Length = 205
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 41/73 (56%), Positives = 53/73 (72%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 132 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 191
Query: 186 RFQKCLEVGMKLE 198
R +KCLE+GMK+E
Sbjct: 192 RLKKCLEMGMKME 204
>UNIPROTKB|E9PK95 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AL645940 EMBL:AL662824 EMBL:AL844527
EMBL:CR759733 EMBL:CR936877 EMBL:CR354565 HGNC:HGNC:10478
ChiTaRS:RXRB IPI:IPI00984407 SMR:E9PK95 Ensembl:ENST00000531100
Ensembl:ENST00000544186 Ensembl:ENST00000546880
Ensembl:ENST00000549889 Ensembl:ENST00000552670
Ensembl:ENST00000553072 UCSC:uc011dqr.2 Uniprot:E9PK95
Length = 347
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 41/81 (50%), Positives = 54/81 (66%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC +CGD+ SG HYG+ +CE CKGFFKRT++ Y+C + C +DK QR RC +CR
Sbjct: 12 KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCR 71
Query: 187 FQKCLEVGMKLE-VSSQSTHG 206
+QKCL GMK E V + G
Sbjct: 72 YQKCLATGMKREAVQEERQRG 92
>RGD|3611 [details] [associations]
symbol:Rxrb "retinoid X receptor beta" species:10116 "Rattus
norvegicus" [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001893 "maternal placenta development"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030375 "thyroid hormone
receptor coactivator activity" evidence=IDA] [GO:0031641 "regulation
of myelination" evidence=IDA] [GO:0042809 "vitamin D receptor
binding" evidence=IDA] [GO:0042974 "retinoic acid receptor binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046966 "thyroid hormone receptor binding" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISO]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=ISO] [GO:0060038 "cardiac muscle cell proliferation"
evidence=ISO] [GO:0071300 "cellular response to retinoic acid"
evidence=ISO] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3611 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0030375 GO:GO:0046982 GO:GO:0042974
GO:GO:0046966 GO:GO:0060038 GO:GO:0031641 HOVERGEN:HBG005606
GO:GO:0042809 GO:GO:0055012 OrthoDB:EOG4SJ5DV GO:GO:0004886
EMBL:M81766 IPI:IPI00394256 PIR:A41651 UniGene:Rn.49295
ProteinModelPortal:P49743 SMR:P49743 STRING:P49743 PhosphoSite:P49743
UCSC:RGD:3611 InParanoid:P49743 BindingDB:P49743 ChEMBL:CHEMBL2805
ArrayExpress:P49743 Genevestigator:P49743
GermOnline:ENSRNOG00000000464 Uniprot:P49743
Length = 458
Score = 253 (94.1 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 89 PGGGS-TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGGGS D+ + H P P + LC +CGD+ SG HYG+ +C
Sbjct: 94 PGGGSGPPEDVKPPVLGVRGLHC------PPPPGGPGAGKRLCAICGDRSSGKHYGVYSC 147
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
E CKGFFKRT++ Y+C + C +DK QR RC +CR+QKCL GMK E V + G
Sbjct: 148 EGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRG 207
>UNIPROTKB|Q499N1 [details] [associations]
symbol:Rara "Protein Rara" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001972 "retinoic acid binding" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0030425
"dendrite" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030853 "negative
regulation of granulocyte differentiation" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032355
"response to estradiol stimulus" evidence=IEA] [GO:0032689
"negative regulation of interferon-gamma production" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032736 "positive regulation of
interleukin-13 production" evidence=IEA] [GO:0032753 "positive
regulation of interleukin-4 production" evidence=IEA] [GO:0032754
"positive regulation of interleukin-5 production" evidence=IEA]
[GO:0035014 "phosphatidylinositol 3-kinase regulator activity"
evidence=IMP] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0043277 "apoptotic cell clearance" evidence=IEA] [GO:0043422
"protein kinase B binding" evidence=IEA] [GO:0043551 "regulation of
phosphatidylinositol 3-kinase activity" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0045630
"positive regulation of T-helper 2 cell differentiation"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045947
"negative regulation of translational initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0051018 "protein kinase A binding" evidence=IEA] [GO:0051099
"positive regulation of binding" evidence=IEA] [GO:0051897
"positive regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0061037 "negative regulation of
cartilage development" evidence=IEA] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=IMP] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0071300
"cellular response to retinoic acid" evidence=IEA] [GO:0071391
"cellular response to estrogen stimulus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:3534 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0070374 GO:GO:0014068 GO:GO:0051897
EMBL:CH473948 HOVERGEN:HBG005606 GO:GO:0035014 GO:GO:0003708
eggNOG:NOG297448 GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312
KO:K08527 CTD:5914 UniGene:Rn.91057 EMBL:BC099830 IPI:IPI00212283
RefSeq:NP_113716.2 SMR:Q499N1 STRING:Q499N1
Ensembl:ENSRNOT00000008659 GeneID:24705 KEGG:rno:24705
ChEMBL:CHEMBL2269 NextBio:604175 Genevestigator:Q499N1
Uniprot:Q499N1
Length = 459
Score = 253 (94.1 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 51/116 (43%), Positives = 65/116 (56%)
Query: 88 SPGGGSTNMDLSSAGISYHPFHTST-----IAATPEHPDTKEGIEELCPVCGDKVSGYHY 142
+PG ST + S H T + I +P P I + C VC DK SGYHY
Sbjct: 38 APGPYSTPLRTPLWNGSNHSIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHY 97
Query: 143 GLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
G+ CE CKGFF+R++Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 98 GVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 153
>UNIPROTKB|D4A6Q3 [details] [associations]
symbol:Rara "Protein Rara" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3534 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708 IPI:IPI00949177
Ensembl:ENSRNOT00000065435 ArrayExpress:D4A6Q3 Uniprot:D4A6Q3
Length = 406
Score = 250 (93.1 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 44/86 (51%), Positives = 55/86 (63%)
Query: 113 IAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
I +P P I + C VC DK SGYHYG+ CE CKGFF+R++Q VYTC +++C
Sbjct: 15 IVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNC 74
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLE 198
I+K R RC +CR QKC EVGM E
Sbjct: 75 IINKVTRNRCQYCRLQKCFEVGMSKE 100
>UNIPROTKB|Q0GFF5 [details] [associations]
symbol:RXRbeta "Retinoid X receptor beta" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:CT737383
RefSeq:NP_001177175.1 UniGene:Ssc.1598 GeneID:100156801
KEGG:ssc:100156801 EMBL:DQ866835 SMR:Q0GFF5 STRING:Q0GFF5
Ensembl:ENSSSCT00000001642 Uniprot:Q0GFF5
Length = 484
Score = 253 (94.1 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 89 PGGGS-TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGGGS D+ + H P P + LC +CGD+ SG HYG+ +C
Sbjct: 168 PGGGSGPPEDVKPPVLGVRGLHC------PPPPGGPGAGKRLCAICGDRSSGKHYGVYSC 221
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
E CKGFFKRT++ Y+C + C +DK QR RC +CR+QKCL GMK E V + G
Sbjct: 222 EGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRG 281
>UNIPROTKB|P51126 [details] [associations]
symbol:rara "Retinoic acid receptor alpha" species:8355
"Xenopus laevis" [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=IMP] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IMP] [GO:0050769 "positive regulation
of neurogenesis" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006351
GO:GO:0050769 GO:GO:0048384 GO:GO:0021955 HOVERGEN:HBG005606
GO:GO:0003708 EMBL:L11445 PIR:A41977 ProteinModelPortal:P51126
SMR:P51126 Xenbase:XB-GENE-865415 Uniprot:P51126
Length = 458
Score = 252 (93.8 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 47/100 (47%), Positives = 59/100 (59%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
S A I + I +P P I + C VC DK SGYHYG+ CE CKGFF+R++
Sbjct: 57 SPATIETQSTSSEEIVPSPPTPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSI 116
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 117 QKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 156
>UNIPROTKB|Q90966 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032526 "response to
retinoic acid" evidence=IDA] [GO:0021575 "hindbrain morphogenesis"
evidence=IDA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0032526 GO:GO:0021575
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448 KO:K08527
CTD:5914 EMBL:X73972 EMBL:X78335 IPI:IPI00603905 IPI:IPI00604270
PIR:I50674 RefSeq:NP_989867.1 UniGene:Gga.112
ProteinModelPortal:Q90966 SMR:Q90966 STRING:Q90966 GeneID:395213
KEGG:gga:395213 NextBio:20815302 Uniprot:Q90966
Length = 460
Score = 252 (93.8 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 46/100 (46%), Positives = 59/100 (59%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
S A + + I +P P I + C VC DK SGYHYG+ CE CKGFF+R++
Sbjct: 57 SPATVETQSTSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSI 116
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 117 QKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKE 156
>UNIPROTKB|F1SM76 [details] [associations]
symbol:PPARA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003074
InterPro:IPR003076 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01288 PRINTS:PR01289 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0008144 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0046321 GO:GO:0010887 GO:GO:0000122 GO:GO:0010891
GO:GO:0042060 GO:GO:0008544 GO:GO:0070166 GO:GO:0032099
GeneTree:ENSGT00700000104361 GO:GO:0072363 GO:GO:0072369
GO:GO:0010871 OMA:ICPLSPL GO:GO:0072366 EMBL:FP016092
Ensembl:ENSSSCT00000000007 Uniprot:F1SM76
Length = 468
Score = 252 (93.8 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 54/120 (45%), Positives = 64/120 (53%)
Query: 78 NMVDNSYLFQSPGG-GSTNMD-LSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGD 135
+ D YL PG GS D LS A + A E P IE C +CGD
Sbjct: 50 SFTDYQYLGSGPGSDGSVITDTLSPASSPSSVTYPVAPAGADESPSVALNIE--CRICGD 107
Query: 136 KVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
K SGYHYG+ CE CKGFF+RT++ K VY +RSC I K R +C +CRF KCL GM
Sbjct: 108 KASGYHYGVHACEGCKGFFRRTIRLKLVYD-KCDRSCKIQKKNRNKCQYCRFHKCLSAGM 166
>UNIPROTKB|E1BYS2 [details] [associations]
symbol:NR4A3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001707 "mesoderm formation" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0050885 "neuromuscular process controlling balance"
evidence=IEA] [GO:0060005 "vestibular reflex" evidence=IEA]
[GO:2000108 "positive regulation of leukocyte apoptotic process"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003072
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01286
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0033554 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0043524 GO:GO:0005667 GO:GO:0001077
GO:GO:0030522 GO:GO:0045787 GeneTree:ENSGT00640000091364 CTD:8013
KO:K08559 OMA:PSTSMYF GO:GO:2000108 GO:GO:0060005 EMBL:AC140790
IPI:IPI00599268 RefSeq:XP_419081.3 UniGene:Gga.33742
Ensembl:ENSGALT00000022087 GeneID:420996 KEGG:gga:420996
Uniprot:E1BYS2
Length = 609
Score = 255 (94.8 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 45/84 (53%), Positives = 55/84 (65%)
Query: 116 TPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHID 175
+P + G E C VCGD + HYG+ TCE CKGFFKRTVQ Y C+A ++C +D
Sbjct: 257 SPPSRSSSSG-EGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVD 315
Query: 176 KTQRKRCPFCRFQKCLEVGMKLEV 199
K +R RC +CRFQKCL VGM EV
Sbjct: 316 KRRRNRCQYCRFQKCLSVGMVKEV 339
>UNIPROTKB|F1NBB9 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0001834
"trophectodermal cell proliferation" evidence=IEA] [GO:0001892
"embryonic placenta development" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104391
OMA:EDRHLGS EMBL:AADN02003482 EMBL:AADN02003483 IPI:IPI00811660
Ensembl:ENSGALT00000016888 Uniprot:F1NBB9
Length = 438
Score = 236 (88.1 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 41/72 (56%), Positives = 49/72 (68%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 105 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 164
Query: 187 FQKCLEVGMKLE 198
F KCL+VGM E
Sbjct: 165 FMKCLKVGMLKE 176
Score = 35 (17.4 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 207 VVVIWSPHSPSISENL 222
V++ W+ H P S NL
Sbjct: 258 VIIGWAKHIPGFS-NL 272
>UNIPROTKB|F6V776 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 OMA:EDRHLGS Ensembl:ENSCAFT00000027147
EMBL:AAEX03005862 EMBL:AAEX03005860 EMBL:AAEX03005861
Uniprot:F6V776
Length = 438
Score = 236 (88.1 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 41/72 (56%), Positives = 49/72 (68%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 105 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 164
Query: 187 FQKCLEVGMKLE 198
F KCL+VGM E
Sbjct: 165 FMKCLKVGMLKE 176
Score = 35 (17.4 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 207 VVVIWSPHSPSISENL 222
V++ W+ H P S NL
Sbjct: 258 VIIGWAKHIPGFS-NL 272
>UNIPROTKB|E2QSQ7 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
Ensembl:ENSCAFT00000027147 Uniprot:E2QSQ7
Length = 441
Score = 236 (88.1 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 41/72 (56%), Positives = 49/72 (68%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 100 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 159
Query: 187 FQKCLEVGMKLE 198
F KCL+VGM E
Sbjct: 160 FMKCLKVGMLKE 171
Score = 35 (17.4 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 207 VVVIWSPHSPSISENL 222
V++ W+ H P S NL
Sbjct: 253 VIIGWAKHIPGFS-NL 267
>MGI|MGI:98215 [details] [associations]
symbol:Rxrb "retinoid X receptor beta" species:10090 "Mus
musculus" [GO:0001701 "in utero embryonic development"
evidence=IGI] [GO:0001893 "maternal placenta development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030375 "thyroid hormone receptor
coactivator activity" evidence=ISO] [GO:0031641 "regulation of
myelination" evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IGI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046966 "thyroid
hormone receptor binding" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048384 "retinoic
acid receptor signaling pathway" evidence=IDA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IGI;IMP]
[GO:0060038 "cardiac muscle cell proliferation" evidence=IGI]
[GO:0071300 "cellular response to retinoic acid" evidence=IDA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:98215 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0001701 GO:GO:0045944 GO:GO:0044212 GO:GO:0001893
EMBL:AF100956 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:D21831
EMBL:BC049773 EMBL:M84818 EMBL:M26804 EMBL:X66224 IPI:IPI00226615
IPI:IPI00890271 PIR:A34418 PIR:D41727 PIR:I84718 PIR:S26669
RefSeq:NP_001192145.1 RefSeq:NP_035436.1 UniGene:Mm.1243
ProteinModelPortal:P28704 SMR:P28704 IntAct:P28704 STRING:P28704
PhosphoSite:P28704 PaxDb:P28704 PRIDE:P28704
Ensembl:ENSMUST00000116612 GeneID:20182 KEGG:mmu:20182
UCSC:uc008ixs.1 InParanoid:P28704 BindingDB:P28704
ChEMBL:CHEMBL4047 NextBio:297709 Bgee:P28704 CleanEx:MM_RXRB
Genevestigator:P28704 GermOnline:ENSMUSG00000039656 Uniprot:P28704
Length = 520
Score = 253 (94.1 bits), Expect = 6.1e-21, P = 6.1e-21
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 89 PGGGS-TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGGGS D+ + H P P + LC +CGD+ SG HYG+ +C
Sbjct: 156 PGGGSGPPEDVKPPVLGVRGLHC------PPPPGGPGAGKRLCAICGDRSSGKHYGVYSC 209
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
E CKGFFKRT++ Y+C + C +DK QR RC +CR+QKCL GMK E V + G
Sbjct: 210 EGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRG 269
>UNIPROTKB|F1M9P1 [details] [associations]
symbol:Rxrb "Retinoic acid receptor RXR-beta" species:10116
"Rattus norvegicus" [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001893 "maternal placenta development"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3611 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0044212 GO:GO:0060038 GeneTree:ENSGT00690000101777
GO:GO:0055012 GO:GO:0004886 IPI:IPI00394256 OMA:FLPERHA
Ensembl:ENSRNOT00000041613 ArrayExpress:F1M9P1 Uniprot:F1M9P1
Length = 522
Score = 253 (94.1 bits), Expect = 6.1e-21, P = 6.1e-21
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 89 PGGGS-TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGGGS D+ + H P P + LC +CGD+ SG HYG+ +C
Sbjct: 154 PGGGSGPPEDVKPPVLGVRGLHC------PPPPGGPGAGKRLCAICGDRSSGKHYGVYSC 207
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
E CKGFFKRT++ Y+C + C +DK QR RC +CR+QKCL GMK E V + G
Sbjct: 208 EGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRG 267
>UNIPROTKB|E2R9K8 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00690000101777 OMA:ANYSEVL
EMBL:AAEX03015880 Ensembl:ENSCAFT00000013166 Uniprot:E2R9K8
Length = 462
Score = 237 (88.5 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 40/105 (38%), Positives = 62/105 (59%)
Query: 94 TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGF 153
T ++ + I Y+ + S+ T T G+ LC +CGD+ +G HYG +C+ CKGF
Sbjct: 31 TTLEFETMQILYNS-NDSSAPETTSMNATDNGVNCLCAICGDRATGKHYGASSCDGCKGF 89
Query: 154 FKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
F+R+++ VY+C R C +DK +R +C +CR +KC GMK E
Sbjct: 90 FRRSIRKSHVYSCRFSRQCVVDKDKRNQCRYCRLRKCFRAGMKKE 134
Score = 35 (17.4 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 188 QKCLEVGMKLEVSSQSTHGVVVIWSPHSPSISE 220
+K +G E Q V+V W+ + P+ SE
Sbjct: 185 KKIASIGDVCESMKQQLL-VLVEWAKYIPAFSE 216
>UNIPROTKB|P10826 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0021756 "striatum development"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331
"negative regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0061037 "negative regulation of cartilage development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0048566
"embryonic digestive tract development" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0008285 GO:GO:0005654 GO:GO:0022008 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0000122 GO:GO:0043065
GO:GO:0048566 GO:GO:0035264 GO:GO:0035116
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0048048
DrugBank:DB00459 GO:GO:0006367 GO:GO:0001657 GO:GO:0021756
GO:GO:0032331 GO:GO:0003417 HOVERGEN:HBG005606 GO:GO:0003708
GO:GO:0061037 GO:GO:0055012 PDB:4DM6 PDB:4DM8 PDBsum:4DM6
PDBsum:4DM8 DrugBank:DB00523 DrugBank:DB00926 eggNOG:NOG297448
HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7 DrugBank:DB00210
DrugBank:DB04942 DrugBank:DB00799 CTD:5915 KO:K08528 EMBL:X07282
EMBL:Y00291 EMBL:AF157483 EMBL:BC060794 EMBL:X56849 EMBL:X77664
EMBL:X04014 EMBL:M57445 IPI:IPI00022989 IPI:IPI00219014
IPI:IPI00745428 PIR:S02827 PIR:S49021 RefSeq:NP_000956.2
RefSeq:NP_057236.1 UniGene:Hs.654490 UniGene:Hs.733004 PDB:1HRA
PDB:1XAP PDBsum:1HRA PDBsum:1XAP ProteinModelPortal:P10826
SMR:P10826 IntAct:P10826 MINT:MINT-1180428 STRING:P10826
DMDM:17380507 PRIDE:P10826 DNASU:5915 Ensembl:ENST00000330688
Ensembl:ENST00000404969 Ensembl:ENST00000437042
Ensembl:ENST00000458646 GeneID:5915 KEGG:hsa:5915 UCSC:uc003cdi.2
GeneCards:GC03P025194 HGNC:HGNC:9865 HPA:CAB002617 HPA:HPA004174
MIM:180220 neXtProt:NX_P10826 PharmGKB:PA34226 OMA:QEVFVCI
PhylomeDB:P10826 BindingDB:P10826 ChEMBL:CHEMBL2008
EvolutionaryTrace:P10826 GenomeRNAi:5915 NextBio:23024
ArrayExpress:P10826 Bgee:P10826 CleanEx:HS_RARB
Genevestigator:P10826 GermOnline:ENSG00000077092 Uniprot:P10826
Length = 455
Score = 251 (93.4 bits), Expect = 6.4e-21, P = 6.4e-21
Identities = 48/110 (43%), Positives = 63/110 (57%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCE 148
P G ST S A I + + +P P + + C VC DK SGYHYG+ CE
Sbjct: 50 PSGCSTP---SPATIETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACE 106
Query: 149 SCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
CKGFF+R++Q +YTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 107 GCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKE 156
>UNIPROTKB|A6H7I6 [details] [associations]
symbol:RXRB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 OMA:FLPERHA EMBL:DAAA02054891
EMBL:BC146260 IPI:IPI00709103 UniGene:Bt.57603 SMR:A6H7I6
STRING:A6H7I6 Ensembl:ENSBTAT00000000860 InParanoid:A6H7I6
Uniprot:A6H7I6
Length = 532
Score = 253 (94.1 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 89 PGGGS-TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGGGS D+ + H P P + LC +CGD+ SG HYG+ +C
Sbjct: 168 PGGGSGPPEDVKPPVLGVRGLHC------PPPPGGPGAGKRLCAICGDRSSGKHYGVYSC 221
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
E CKGFFKRT++ Y+C + C +DK QR RC +CR+QKCL GMK E V + G
Sbjct: 222 EGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRG 281
>UNIPROTKB|A5D9P3 [details] [associations]
symbol:RXRB "Retinoid X receptor, beta" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:CT737383
EMBL:BX640585 RefSeq:NP_001177175.1 UniGene:Ssc.1598
ProteinModelPortal:A5D9P3 SMR:A5D9P3 STRING:A5D9P3
Ensembl:ENSSSCT00000036123 GeneID:100156801 KEGG:ssc:100156801
OMA:FLPERHA Uniprot:A5D9P3
Length = 532
Score = 253 (94.1 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 89 PGGGS-TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGGGS D+ + H P P + LC +CGD+ SG HYG+ +C
Sbjct: 168 PGGGSGPPEDVKPPVLGVRGLHC------PPPPGGPGAGKRLCAICGDRSSGKHYGVYSC 221
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
E CKGFFKRT++ Y+C + C +DK QR RC +CR+QKCL GMK E V + G
Sbjct: 222 EGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRG 281
>UNIPROTKB|Q5TJF7 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AJ630366 HOVERGEN:HBG005606 HOGENOM:HOG000260821
InterPro:IPR021780 Pfam:PF11825 ProteinModelPortal:Q5TJF7
SMR:Q5TJF7 STRING:Q5TJF7 Uniprot:Q5TJF7
Length = 533
Score = 253 (94.1 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 89 PGGGS-TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGGGS D+ + H P P + LC +CGD+ SG HYG+ +C
Sbjct: 169 PGGGSGPPEDVKPPVLGVRGLHC------PPPPGGPGAGKRLCAICGDRSSGKHYGVYSC 222
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
E CKGFFKRT++ Y+C + C +DK QR RC +CR+QKCL GMK E V + G
Sbjct: 223 EGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRG 282
>UNIPROTKB|P28702 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0060038 "cardiac muscle cell proliferation" evidence=IEA]
[GO:0071300 "cellular response to retinoic acid" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0005654
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 Pathway_Interaction_DB:rxr_vdr_pathway
GO:GO:0044212 GO:GO:0003713 GO:GO:0030375
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
EMBL:AL031228 GO:GO:0060038 EMBL:AL645940 EMBL:AL662824
EMBL:AL844527 EMBL:CR759733 EMBL:CR936877 HOVERGEN:HBG005606
DrugBank:DB00307 GO:GO:0055012 PDB:1UHL PDBsum:1UHL
DrugBank:DB00523 DrugBank:DB00926 DrugBank:DB00210 DrugBank:DB00799
HOGENOM:HOG000260821 OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525
EMBL:M84820 EMBL:X63522 EMBL:AF065396 EMBL:AF120161 EMBL:HQ709179
EMBL:AB209244 EMBL:CR354565 EMBL:BC001167 EMBL:X66424
IPI:IPI00426305 IPI:IPI00607575 PIR:S37781 RefSeq:NP_068811.1
UniGene:Hs.388034 PDB:1H9U PDBsum:1H9U ProteinModelPortal:P28702
SMR:P28702 IntAct:P28702 MINT:MINT-1365658 STRING:P28702
PhosphoSite:P28702 DMDM:1350911 PaxDb:P28702 PRIDE:P28702
DNASU:6257 Ensembl:ENST00000374680 Ensembl:ENST00000374685
Ensembl:ENST00000383217 Ensembl:ENST00000415157
Ensembl:ENST00000415909 Ensembl:ENST00000431820
Ensembl:ENST00000436753 GeneID:6257 KEGG:hsa:6257 UCSC:uc003odb.3
CTD:6257 GeneCards:GC06M033161 HGNC:HGNC:10478 HPA:CAB002003
MIM:180246 neXtProt:NX_P28702 PharmGKB:PA34891 PhylomeDB:P28702
BindingDB:P28702 ChEMBL:CHEMBL1870 ChiTaRS:RXRB
EvolutionaryTrace:P28702 GenomeRNAi:6257 NextBio:24299
ArrayExpress:P28702 Bgee:P28702 CleanEx:HS_RXRB
Genevestigator:P28702 GermOnline:ENSG00000204231 Uniprot:P28702
Length = 533
Score = 253 (94.1 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 89 PGGGS-TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGGGS D+ + H P P + LC +CGD+ SG HYG+ +C
Sbjct: 169 PGGGSGPPEDVKPPVLGVRGLHC------PPPPGGPGAGKRLCAICGDRSSGKHYGVYSC 222
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
E CKGFFKRT++ Y+C + C +DK QR RC +CR+QKCL GMK E V + G
Sbjct: 223 EGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRG 282
>UNIPROTKB|F1PUF6 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9615
"Canis lupus familiaris" [GO:0071300 "cellular response to retinoic
acid" evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0044212 GO:GO:0060038 GeneTree:ENSGT00690000101777
GO:GO:0055012 GO:GO:0004886 OMA:FLPERHA EMBL:AAEX03008237
Ensembl:ENSCAFT00000001418 NextBio:20856477 Uniprot:F1PUF6
Length = 536
Score = 253 (94.1 bits), Expect = 6.6e-21, P = 6.6e-21
Identities = 50/120 (41%), Positives = 65/120 (54%)
Query: 89 PGGGS-TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTC 147
PGGGS D+ + H P P + LC +CGD+ SG HYG+ +C
Sbjct: 168 PGGGSGPPEDVKPPVLGVRGLHC------PPPPGGPGAGKRLCAICGDRSSGKHYGVYSC 221
Query: 148 ESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE-VSSQSTHG 206
E CKGFFKRT++ Y+C + C +DK QR RC +CR+QKCL GMK E V + G
Sbjct: 222 EGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRG 281
>RGD|3369 [details] [associations]
symbol:Ppara "peroxisome proliferator activated receptor alpha"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IEA;ISO] [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=ISO;TAS] [GO:0004872 "receptor activity" evidence=ISO]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006631 "fatty acid metabolic
process" evidence=ISO;IMP] [GO:0007507 "heart development"
evidence=IEP] [GO:0008144 "drug binding" evidence=ISO;ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008289 "lipid
binding" evidence=ISO;ISS] [GO:0008544 "epidermis development"
evidence=IEA;ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010745 "negative regulation of macrophage derived
foam cell differentiation" evidence=ISO] [GO:0010871 "negative
regulation of receptor biosynthetic process" evidence=IEA;ISO]
[GO:0010887 "negative regulation of cholesterol storage"
evidence=IEA;ISO] [GO:0010891 "negative regulation of sequestering of
triglyceride" evidence=IEA;ISO] [GO:0019217 "regulation of fatty acid
metabolic process" evidence=ISO;TAS] [GO:0019902 "phosphatase
binding" evidence=IPI] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0030522 "intracellular receptor mediated signaling
pathway" evidence=ISO] [GO:0031624 "ubiquitin conjugating enzyme
binding" evidence=IEA;ISO] [GO:0032091 "negative regulation of
protein binding" evidence=IMP] [GO:0032099 "negative regulation of
appetite" evidence=ISO;ISS] [GO:0032403 "protein complex binding"
evidence=IMP] [GO:0032868 "response to insulin stimulus"
evidence=IMP] [GO:0035095 "behavioral response to nicotine"
evidence=IDA] [GO:0042060 "wound healing" evidence=IEA;ISO]
[GO:0042157 "lipoprotein metabolic process" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045776
"negative regulation of blood pressure" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046321 "positive
regulation of fatty acid oxidation" evidence=IEA;ISO] [GO:0051525
"NFAT protein binding" evidence=IPI] [GO:0070166 "enamel
mineralization" evidence=IEA;ISO] [GO:0072363 "regulation of
glycolysis by positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0072366 "regulation of
cellular ketone metabolic process by positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0072369 "regulation of lipid transport by positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0097371 "MDM2/MDM4 family protein binding" evidence=IPI]
[GO:1901215 "negative regulation of neuron death" evidence=IMP;IDA]
[GO:2000678 "negative regulation of transcription regulatory region
DNA binding" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003074 InterPro:IPR003076
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01289
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:3369
GO:GO:0005634 GO:GO:0019904 GO:GO:0045893 GO:GO:0007507 GO:GO:0032403
GO:GO:0046872 GO:GO:0008144 GO:GO:0035095 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0001666 GO:GO:1901215 GO:GO:0045776
GO:GO:0006631 GO:GO:0019217 GO:GO:0046321 GO:GO:0042157 GO:GO:0010887
GO:GO:0032868 GO:GO:0000122 GO:GO:0010891 GO:GO:0008289 GO:GO:0032091
GO:GO:0042060 GO:GO:0008544 GO:GO:0070166 GO:GO:0032099
eggNOG:NOG266867 GeneTree:ENSGT00700000104361 GO:GO:2000678
GO:GO:0072363 GO:GO:0072369 GO:GO:0010871 CTD:5465
HOGENOM:HOG000261626 HOVERGEN:HBG106004 KO:K07294 OMA:ICPLSPL
OrthoDB:EOG4FFD1Q GO:GO:0072366 EMBL:M88592 IPI:IPI00204351
PIR:A45288 RefSeq:NP_037328.1 UniGene:Rn.9753
ProteinModelPortal:P37230 SMR:P37230 DIP:DIP-29529N STRING:P37230
PhosphoSite:P37230 PRIDE:P37230 Ensembl:ENSRNOT00000030082
GeneID:25747 KEGG:rno:25747 InParanoid:P37230 BindingDB:P37230
ChEMBL:CHEMBL2129 NextBio:607925 Genevestigator:P37230
GermOnline:ENSRNOG00000021463 Uniprot:P37230
Length = 468
Score = 251 (93.4 bits), Expect = 7.1e-21, P = 7.1e-21
Identities = 53/120 (44%), Positives = 64/120 (53%)
Query: 78 NMVDNSYLFQSPGG-GSTNMDLSSAGISYHPFHTSTI-AATPEHPDTKEGIEELCPVCGD 135
+ D YL PG GS D S S + +T E P IE C +CGD
Sbjct: 50 SFADYQYLGSCPGSEGSVITDTLSPASSPSSVSCPAVPTSTDESPGNALNIE--CRICGD 107
Query: 136 KVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
K SGYHYG+ CE CKGFF+RT++ K Y +RSC I K R +C +CRF KCL VGM
Sbjct: 108 KASGYHYGVHACEGCKGFFRRTIRLKLAYD-KCDRSCKIQKKNRNKCQYCRFHKCLSVGM 166
>UNIPROTKB|F1P0B9 [details] [associations]
symbol:F1P0B9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104390
EMBL:AADN02014532 EMBL:AADN02014533 IPI:IPI00822185
ProteinModelPortal:F1P0B9 Ensembl:ENSGALT00000013876
ArrayExpress:F1P0B9 Uniprot:F1P0B9
Length = 443
Score = 250 (93.1 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 99 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 158
Query: 186 RFQKCLEVGMKLEVSSQS 203
R +KCLE+GMK+E S QS
Sbjct: 159 RLKKCLEMGMKME-SVQS 175
>UNIPROTKB|F1NQH5 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0008285 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0043065 GO:GO:0032331 GO:GO:0003708 GO:GO:0061037
GeneTree:ENSGT00680000099662 EMBL:AADN02001127 EMBL:AADN02001120
EMBL:AADN02001121 EMBL:AADN02001122 EMBL:AADN02001123
EMBL:AADN02001124 EMBL:AADN02001125 EMBL:AADN02001126
IPI:IPI01017311 Ensembl:ENSGALT00000018429
Ensembl:ENSGALT00000037746 Uniprot:F1NQH5
Length = 359
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 42/86 (48%), Positives = 55/86 (63%)
Query: 113 IAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
+ +P P + + C VC DK SGYHYG+ CE CKGFF+R++Q VYTC +++C
Sbjct: 11 LVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNC 70
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLE 198
I+K R RC +CR QKC EVGM E
Sbjct: 71 VINKVTRNRCQYCRLQKCFEVGMSKE 96
>UNIPROTKB|B0G0X3 [details] [associations]
symbol:PPARA "Peroxisome proliferator-activated receptor
alpha" species:9606 "Homo sapiens" [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001628 InterPro:IPR003076 InterPro:IPR013088
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR01289 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10
GO:GO:0030522 EMBL:AL078611 EMBL:AL049856 UniGene:Hs.103110
UniGene:Hs.710044 HGNC:HGNC:9232 EMBL:Z94161 EMBL:EU395809
IPI:IPI00896375 ProteinModelPortal:B0G0X3 SMR:B0G0X3 STRING:B0G0X3
Ensembl:ENST00000434345 HOVERGEN:HBG082808 ArrayExpress:B0G0X3
Bgee:B0G0X3 Uniprot:B0G0X3
Length = 174
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 53/114 (46%), Positives = 63/114 (55%)
Query: 84 YLFQSPGG-GSTNMD-LSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYH 141
YL PG GS D LS A + + E P IE C +CGDK SGYH
Sbjct: 56 YLGSCPGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIE--CRICGDKASGYH 113
Query: 142 YGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
YG+ CE CKGFF+RT++ K VY +RSC I K R +C +CRF KCL VGM
Sbjct: 114 YGVHACEGCKGFFRRTIRLKLVYD-KCDRSCKIQKKNRNKCQYCRFHKCLSVGM 166
>UNIPROTKB|K7GLR7 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9823
"Sus scrofa" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001628
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 Gene3D:3.30.50.10
GeneTree:ENSGT00690000101777 EMBL:CU462963 EMBL:CU469086
Ensembl:ENSSSCT00000033501 Uniprot:K7GLR7
Length = 78
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 39/75 (52%), Positives = 53/75 (70%)
Query: 119 HPDTKEG--IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+P T G ++ +C +CGD+ SG HYG+ +CE CKGFFKRT++ +YTC + C IDK
Sbjct: 3 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 62
Query: 177 TQRKRCPFCRFQKCL 191
QR RC +CR+QKCL
Sbjct: 63 RQRNRCQYCRYQKCL 77
>UNIPROTKB|F1NWE8 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:AADN02001127 EMBL:AADN02001120
EMBL:AADN02001121 EMBL:AADN02001122 EMBL:AADN02001123
EMBL:AADN02001124 EMBL:AADN02001125 EMBL:AADN02001126
IPI:IPI00681960 ProteinModelPortal:F1NWE8
Ensembl:ENSGALT00000018430 ArrayExpress:F1NWE8 Uniprot:F1NWE8
Length = 368
Score = 245 (91.3 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 42/86 (48%), Positives = 55/86 (63%)
Query: 113 IAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
+ +P P + + C VC DK SGYHYG+ CE CKGFF+R++Q VYTC +++C
Sbjct: 12 LVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNC 71
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLE 198
I+K R RC +CR QKC EVGM E
Sbjct: 72 VINKVTRNRCQYCRLQKCFEVGMSKE 97
>ZFIN|ZDB-GENE-990415-242 [details] [associations]
symbol:rxrbb "retinoid x receptor, beta b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-242 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 HOVERGEN:HBG005606 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
EMBL:U29941 IPI:IPI00480966 PIR:I50516 RefSeq:NP_571313.1
UniGene:Dr.350 ProteinModelPortal:Q90417 SMR:Q90417 GeneID:30486
KEGG:dre:30486 CTD:30486 NextBio:20806878 ArrayExpress:Q90417
Uniprot:Q90417
Length = 422
Score = 248 (92.4 bits), Expect = 9.9e-21, P = 9.9e-21
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ +C +CGD+ SG HYG+ +CE CKGFFKRTV+ YTC + C +DK QR RC +CR
Sbjct: 87 KRMCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECLVDKRQRNRCQYCR 146
Query: 187 FQKCLEVGMKLE 198
+QKCL +GMK E
Sbjct: 147 YQKCLAMGMKRE 158
>UNIPROTKB|F1N0K9 [details] [associations]
symbol:LOC100852315 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001834 "trophectodermal cell
proliferation" evidence=IEA] [GO:0001831 "trophectodermal cellular
morphogenesis" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0001892
GO:GO:0019827 GO:GO:0001831 GeneTree:ENSGT00700000104391
OMA:EDRHLGS GO:GO:0001834 EMBL:DAAA02029654 EMBL:DAAA02029655
IPI:IPI00690687 ProteinModelPortal:F1N0K9
Ensembl:ENSBTAT00000016290 Uniprot:F1N0K9
Length = 478
Score = 236 (88.1 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 41/72 (56%), Positives = 49/72 (68%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 145 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 204
Query: 187 FQKCLEVGMKLE 198
F KCL+VGM E
Sbjct: 205 FMKCLKVGMLKE 216
Score = 35 (17.4 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 207 VVVIWSPHSPSISENL 222
V++ W+ H P S NL
Sbjct: 298 VIIGWAKHIPGFS-NL 312
>RGD|3535 [details] [associations]
symbol:Rarb "retinoic acid receptor, beta" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001657 "ureteric bud
development" evidence=ISO] [GO:0003417 "growth plate cartilage
development" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003708 "retinoic
acid receptor activity" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0008144 "drug binding" evidence=IDA] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0021756 "striatum
development" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0031641 "regulation of myelination" evidence=IDA] [GO:0032331
"negative regulation of chondrocyte differentiation" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=IPI] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=ISO] [GO:0035264
"multicellular organism growth" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043068 "positive
regulation of programmed cell death" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046965 "retinoid X receptor binding"
evidence=IPI] [GO:0048048 "embryonic eye morphogenesis" evidence=ISO]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=IDA]
[GO:0048566 "embryonic digestive tract development" evidence=ISO]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=ISO] [GO:0061037 "negative regulation of cartilage
development" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 RGD:3535 GO:GO:0005634 GO:GO:0046872 GO:GO:0008144
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045666 GO:GO:0031641
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448 HSSP:P10826
EMBL:AJ002942 IPI:IPI00763374 UniGene:Rn.232243
ProteinModelPortal:O54746 STRING:O54746 Genevestigator:O54746
Uniprot:O54746
Length = 291
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 41/86 (47%), Positives = 55/86 (63%)
Query: 113 IAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
+ +P P + + C VC DK SGYHYG+ CE CKGFF+R++Q +YTC +++C
Sbjct: 64 LVPSPPSPLPPPPVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNC 123
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLE 198
I+K R RC +CR QKC EVGM E
Sbjct: 124 VINKVTRNRCQYCRLQKCFEVGMSKE 149
>UNIPROTKB|O35507 [details] [associations]
symbol:PPARA "Peroxisome proliferator-activated receptor
alpha" species:10141 "Cavia porcellus" [GO:0008144 "drug binding"
evidence=ISS] [GO:0008289 "lipid binding" evidence=ISS] [GO:0032099
"negative regulation of appetite" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003074 InterPro:IPR003076 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01289 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0008144 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0046321 GO:GO:0010887
GO:GO:0000122 GO:GO:0010891 GO:GO:0008289 GO:GO:0042060
GO:GO:0008544 GO:GO:0070166 GO:GO:0032099 eggNOG:NOG266867
GeneTree:ENSGT00700000104361 GO:GO:0072363 GO:GO:0072369
GO:GO:0010871 CTD:5465 HOGENOM:HOG000261626 HOVERGEN:HBG106004
OMA:ICPLSPL OrthoDB:EOG4FFD1Q GO:GO:0072366 EMBL:AJ000222
RefSeq:NP_001166475.1 ProteinModelPortal:O35507 SMR:O35507
STRING:O35507 Ensembl:ENSCPOT00000001502 GeneID:100135604
InParanoid:O35507 Uniprot:O35507
Length = 467
Score = 249 (92.7 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 53/114 (46%), Positives = 63/114 (55%)
Query: 84 YLFQSPGG-GSTNMD-LSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYH 141
YL PG GS D LS A + E P + IE C +CGDK SGYH
Sbjct: 56 YLGSGPGSDGSVITDTLSPASSPSSVSYPEVPCGVDEPPSSALNIE--CRICGDKASGYH 113
Query: 142 YGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
YG+ CE CKGFF+RT++ K VY +RSC I K R +C +CRF KCL VGM
Sbjct: 114 YGVHACEGCKGFFRRTIRLKLVYD-KCDRSCKIQKKNRNKCQYCRFHKCLSVGM 166
>UNIPROTKB|F1N9Q8 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 OMA:QEVFVCI EMBL:AADN02001127
EMBL:AADN02001120 EMBL:AADN02001121 EMBL:AADN02001122
EMBL:AADN02001123 EMBL:AADN02001124 EMBL:AADN02001125
EMBL:AADN02001126 IPI:IPI00821263 ProteinModelPortal:F1N9Q8
Ensembl:ENSGALT00000029066 ArrayExpress:F1N9Q8 Uniprot:F1N9Q8
Length = 415
Score = 247 (92.0 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 43/102 (42%), Positives = 61/102 (59%)
Query: 97 DLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKR 156
+++S + + + +P P + + C VC DK SGYHYG+ CE CKGFF+R
Sbjct: 49 EVASLTVETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRR 108
Query: 157 TVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
++Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 109 SIQKNMVYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKE 150
>WB|WBGene00003605 [details] [associations]
symbol:nhr-6 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030728 "ovulation" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0060278 "regulation of ovulation"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0035211
"spermathecum morphogenesis" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0009792 GO:GO:0002119 GO:GO:0030728 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0035211 eggNOG:NOG245120 KO:K08558
GO:GO:0060278 EMBL:AF083224 EMBL:AF273770 EMBL:AY204167 EMBL:Z36237
EMBL:U13076 PIR:G88408 PIR:T43348 RefSeq:NP_497731.1
UniGene:Cel.19471 ProteinModelPortal:P41829 SMR:P41829
DIP:DIP-26405N IntAct:P41829 MINT:MINT-210819 STRING:P41829
EnsemblMetazoa:C48D5.1a GeneID:175462 KEGG:cel:CELE_C48D5.1
UCSC:C48D5.1 CTD:175462 WormBase:C48D5.1a
GeneTree:ENSGT00640000091364 HOGENOM:HOG000019029 InParanoid:P41829
OMA:GARTCEG NextBio:888258 ArrayExpress:P41829 Uniprot:P41829
Length = 619
Score = 252 (93.8 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 45/94 (47%), Positives = 58/94 (61%)
Query: 106 HPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
+P + ST + +T +++C VC D+ HYG TCE CKGFFKRTVQ YT
Sbjct: 244 NPDNLSTPTSFGVPSETALDADKMCAVCNDRAVCLHYGARTCEGCKGFFKRTVQKNSKYT 303
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV 199
C ++C IDK R RC +CR+QKCLEVGM E+
Sbjct: 304 CAGNKTCPIDKRYRSRCQYCRYQKCLEVGMVKEI 337
>UNIPROTKB|F1P101 [details] [associations]
symbol:F1P101 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104109 EMBL:AADN02066725 EMBL:AADN02066726
IPI:IPI00576452 Ensembl:ENSGALT00000001533 OMA:GSIRILE
Uniprot:F1P101
Length = 302
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ QN Y+C +R+C ID+T R RC CR QK
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCSRQRNCLIDRTNRNRCQHCRLQK 69
Query: 190 CLEVGM 195
CL +GM
Sbjct: 70 CLALGM 75
>UNIPROTKB|F1S2P9 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001834 "trophectodermal cell
proliferation" evidence=IEA] [GO:0001831 "trophectodermal cellular
morphogenesis" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0001892
GO:GO:0019827 GO:GO:0001831 GeneTree:ENSGT00700000104391
OMA:EDRHLGS GO:GO:0001834 EMBL:CT757460 Ensembl:ENSSSCT00000002655
Uniprot:F1S2P9
Length = 504
Score = 236 (88.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 41/72 (56%), Positives = 49/72 (68%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 100 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 159
Query: 187 FQKCLEVGMKLE 198
F KCL+VGM E
Sbjct: 160 FMKCLKVGMLKE 171
Score = 35 (17.4 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 207 VVVIWSPHSPSISENL 222
V++ W+ H P S NL
Sbjct: 253 VIIGWAKHIPGFS-NL 267
>ZFIN|ZDB-GENE-040718-34 [details] [associations]
symbol:rxrgb "retinoid X receptor, gamma b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-040718-34 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 InterPro:IPR021780 Pfam:PF11825
EMBL:BX296562 IPI:IPI00972012 Ensembl:ENSDART00000110950
Bgee:F1QDD2 Uniprot:F1QDD2
Length = 458
Score = 248 (92.4 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 42/81 (51%), Positives = 55/81 (67%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ +C +CGD+ SG HYG+ +CE CKGFFKRT++ YTC + C IDK QR RC +CR
Sbjct: 130 KHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDIKECLIDKRQRNRCQYCR 189
Query: 187 FQKCLEVGMKLE-VSSQSTHG 206
+QKCL +GMK E V + G
Sbjct: 190 YQKCLAMGMKREAVQEERQRG 210
>UNIPROTKB|F1SGE6 [details] [associations]
symbol:RARG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070384 "Harderian gland development" evidence=IEA]
[GO:0061037 "negative regulation of cartilage development"
evidence=IEA] [GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA] [GO:0060534 "trachea cartilage development"
evidence=IEA] [GO:0048048 "embryonic eye morphogenesis"
evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0032526 "response to retinoic acid" evidence=IEA] [GO:0032331
"negative regulation of chondrocyte differentiation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0008285
GO:GO:0009952 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0005667 GO:GO:0000122 GO:GO:0043065
GO:GO:0032526 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 GO:GO:0003708 CTD:5916 GO:GO:0070384
GO:GO:0061037 GeneTree:ENSGT00680000099662 KO:K08529 GO:GO:0003430
GO:GO:0060534 EMBL:CU550678 RefSeq:XP_001924421.3 UniGene:Ssc.97565
Ensembl:ENSSSCT00000000277 GeneID:397221 KEGG:ssc:397221
OMA:TFNSMRS Uniprot:F1SGE6
Length = 447
Score = 247 (92.0 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 42/86 (48%), Positives = 57/86 (66%)
Query: 113 IAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
+ ++P P + + C VC DK SGYHYG+ +CE CKGFF+R++Q VYTC +++C
Sbjct: 63 VPSSPSPPPPPR-VYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNC 121
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLE 198
I+K R RC +CR QKC EVGM E
Sbjct: 122 IINKVTRNRCQYCRLQKCFEVGMSKE 147
>UNIPROTKB|F1PFF7 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9615
"Canis lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:AAEX03011644
Ensembl:ENSCAFT00000022969 Uniprot:F1PFF7
Length = 613
Score = 236 (88.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 41/72 (56%), Positives = 48/72 (66%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 267 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACR 326
Query: 187 FQKCLEVGMKLE 198
F KCL VGM E
Sbjct: 327 FTKCLRVGMLKE 338
Score = 38 (18.4 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 98 LSSAGISYHPFHTSTIAATPEHPDTKEGIEE 128
+SS + P + I A P PD+ +G E
Sbjct: 192 MSSQVVGIEPLY---IKAEPASPDSPKGSSE 219
>ZFIN|ZDB-GENE-990415-252 [details] [associations]
symbol:nr2f2 "nuclear receptor subfamily 2, group
F, member 2" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0060838 "lymphatic endothelial
cell fate commitment" evidence=IMP] [GO:0001946 "lymphangiogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-252 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001946 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
OMA:GPPNNTQ EMBL:BX569787 EMBL:BX936364 EMBL:BC162484
IPI:IPI00508689 UniGene:Dr.77152 STRING:B3DGQ7
Ensembl:ENSDART00000059976 GO:GO:0060838 Uniprot:B3DGQ7
Length = 428
Score = 246 (91.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 47/100 (47%), Positives = 62/100 (62%)
Query: 107 PFHTSTIAATPEHPDTKEGIEEL------CPVCGDKVSGYHYGLLTCESCKGFFKRTVQN 160
P + + +TP + T+ E+ C VCGDK SG HYG TCE CK FFKR+V+
Sbjct: 58 PNNNNNTQSTPTNQTTQSQSEKQQPQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRR 117
Query: 161 KKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEVS 200
YTC A R+C ID+ R +C +CR +KCL+VGM+ EVS
Sbjct: 118 NLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREVS 157
>UNIPROTKB|P22448 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001657 "ureteric bud development" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IDA] [GO:0071729 "beak
morphogenesis" evidence=IDA] [GO:0032526 "response to retinoic
acid" evidence=IDA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008285
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0043065 GO:GO:0032526 GO:GO:0035108
GO:GO:0032331 GO:GO:0071729 HOVERGEN:HBG005606 GO:GO:0003708
GO:GO:0061037 eggNOG:NOG297448 GeneTree:ENSGT00680000099662
HOGENOM:HOG000010312 EMBL:X56674 EMBL:X57341 EMBL:X57340
EMBL:X57339 EMBL:S75943 EMBL:X59473 EMBL:S63196 IPI:IPI00580878
IPI:IPI00589689 PIR:A43786 PIR:I51272 PIR:S13512 RefSeq:NP_990657.1
UniGene:Gga.2668 UniGene:Gga.51498 ProteinModelPortal:P22448
SMR:P22448 STRING:P22448 Ensembl:ENSGALT00000037748 GeneID:396266
KEGG:gga:396266 CTD:5915 InParanoid:P22448 KO:K08528
NextBio:20816318 ArrayExpress:P22448 Uniprot:P22448
Length = 455
Score = 247 (92.0 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 44/100 (44%), Positives = 59/100 (59%)
Query: 99 SSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTV 158
S A + + + +P P + + C VC DK SGYHYG+ CE CKGFF+R++
Sbjct: 57 SPATVETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSI 116
Query: 159 QNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
Q VYTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 117 QKNMVYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKE 156
>UNIPROTKB|P49116 [details] [associations]
symbol:NR2C2 "Nuclear receptor subfamily 2 group C member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IEA] [GO:0048520 "positive
regulation of behavior" evidence=IEA] [GO:0051321 "meiotic cell
cycle" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0004872 "receptor activity" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007399 GO:GO:0005654
GO:GO:0030154 EMBL:CH471055 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0004872 GO:GO:0003700
GO:GO:0007283 GO:GO:0003713 GO:GO:0021549 GO:GO:0046982
GO:GO:0040019 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0051321 GO:GO:0048520 EMBL:AC090954 eggNOG:NOG297520
HOVERGEN:HBG008596 HOGENOM:HOG000013058 EMBL:U10990 EMBL:L27586
EMBL:AB307708 EMBL:AK290590 EMBL:AC090937 IPI:IPI00332451
IPI:IPI00749258 PIR:A57031 PIR:I59309 RefSeq:NP_003289.2
UniGene:Hs.555973 PDB:3P0U PDBsum:3P0U ProteinModelPortal:P49116
SMR:P49116 DIP:DIP-5999N IntAct:P49116 STRING:P49116
PhosphoSite:P49116 DMDM:1351190 PaxDb:P49116 PRIDE:P49116
DNASU:7182 Ensembl:ENST00000323373 Ensembl:ENST00000393102
Ensembl:ENST00000406272 Ensembl:ENST00000425241 GeneID:7182
KEGG:hsa:7182 UCSC:uc003bzj.4 CTD:7182 GeneCards:GC03P014989
HGNC:HGNC:7972 HPA:HPA006313 MIM:601426 neXtProt:NX_P49116
PharmGKB:PA31755 KO:K08544 OMA:KADVQRP OrthoDB:EOG4Z36D8
BindingDB:P49116 ChEMBL:CHEMBL5716 ChiTaRS:NR2C2
EvolutionaryTrace:P49116 GenomeRNAi:7182 NextBio:28158
ArrayExpress:P49116 Bgee:P49116 CleanEx:HS_NR2C2
Genevestigator:P49116 GermOnline:ENSG00000177463 Uniprot:P49116
Length = 596
Score = 250 (93.1 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLEVSSQS 203
R +KCLE+GMK+E S QS
Sbjct: 173 RLKKCLEMGMKME-SVQS 189
>UNIPROTKB|F1SPJ9 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051321 "meiotic cell cycle" evidence=IEA] [GO:0048520
"positive regulation of behavior" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700 GO:GO:0007283
GO:GO:0006351 GO:GO:0021549 GO:GO:0040019 GO:GO:0051321
GO:GO:0048520 GeneTree:ENSGT00700000104390 CTD:7182 KO:K08544
OMA:KADVQRP EMBL:CU856531 EMBL:CU469370 RefSeq:XP_003132435.3
Ensembl:ENSSSCT00000012690 GeneID:100513111 KEGG:ssc:100513111
Uniprot:F1SPJ9
Length = 596
Score = 250 (93.1 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLEVSSQS 203
R +KCLE+GMK+E S QS
Sbjct: 173 RLKKCLEMGMKME-SVQS 189
>MGI|MGI:1352466 [details] [associations]
symbol:Nr2c2 "nuclear receptor subfamily 2, group C, member
2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP;TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0048520 "positive regulation of behavior" evidence=IMP]
[GO:0051321 "meiotic cell cycle" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:U32939 MGI:MGI:1352466 GO:GO:0005634
GO:GO:0030154 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0007283 GO:GO:0006351
GO:GO:0021549 GO:GO:0040019 GO:GO:0051321 GO:GO:0048520
eggNOG:NOG297520 HOVERGEN:HBG008596 HOGENOM:HOG000013058 CTD:7182
KO:K08544 OrthoDB:EOG4Z36D8 ChiTaRS:NR2C2 EMBL:U11688 EMBL:S75970
IPI:IPI00113012 PIR:I54075 PIR:JC4299 RefSeq:NP_035760.1
UniGene:Mm.442385 UniGene:Mm.87062 ProteinModelPortal:P49117
SMR:P49117 STRING:P49117 PhosphoSite:P49117 PRIDE:P49117
Ensembl:ENSMUST00000113460 GeneID:22026 KEGG:mmu:22026
InParanoid:P49117 NextBio:301768 Bgee:P49117 CleanEx:MM_NR2C2
Genevestigator:P49117 GermOnline:ENSMUSG00000005893 Uniprot:P49117
Length = 596
Score = 250 (93.1 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLEVSSQS 203
R +KCLE+GMK+E S QS
Sbjct: 173 RLKKCLEMGMKME-SVQS 189
>RGD|3201 [details] [associations]
symbol:Nr2c2 "nuclear receptor subfamily 2, group C, member 2"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0048520 "positive regulation of behavior" evidence=ISO]
[GO:0051321 "meiotic cell cycle" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:3201 GO:GO:0005634
GO:GO:0030154 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0007283 GO:GO:0006351 GO:GO:0021549 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 eggNOG:NOG297520 HOVERGEN:HBG008596
HOGENOM:HOG000013058 CTD:7182 KO:K08544 OrthoDB:EOG4Z36D8 EMBL:L27513
IPI:IPI00213603 PIR:I80177 RefSeq:NP_059019.1 UniGene:Rn.10485
ProteinModelPortal:P55094 SMR:P55094 STRING:P55094 PhosphoSite:P55094
PRIDE:P55094 GeneID:50659 KEGG:rno:50659 UCSC:RGD:3201
InParanoid:P55094 NextBio:610474 ArrayExpress:P55094
Genevestigator:P55094 GermOnline:ENSRNOG00000010536 Uniprot:P55094
Length = 596
Score = 250 (93.1 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLEVSSQS 203
R +KCLE+GMK+E S QS
Sbjct: 173 RLKKCLEMGMKME-SVQS 189
>UNIPROTKB|G3V7F5 [details] [associations]
symbol:Nr2c2 "RCG56527, isoform CRA_c" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0040019 "positive
regulation of embryonic development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0048520 "positive regulation of behavior"
evidence=IEA] [GO:0051321 "meiotic cell cycle" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3201 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
EMBL:CH473957 GeneTree:ENSGT00700000104390 OMA:KADVQRP
Ensembl:ENSRNOT00000014353 Uniprot:G3V7F5
Length = 596
Score = 250 (93.1 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 113 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFC 172
Query: 186 RFQKCLEVGMKLEVSSQS 203
R +KCLE+GMK+E S QS
Sbjct: 173 RLKKCLEMGMKME-SVQS 189
>UNIPROTKB|F1P0D1 [details] [associations]
symbol:F1P0D1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IEA]
[GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048520 "positive
regulation of behavior" evidence=IEA] [GO:0051321 "meiotic cell
cycle" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0030522 GO:GO:0040019 GO:GO:0051321 GO:GO:0048520
GeneTree:ENSGT00700000104390 OMA:KADVQRP EMBL:AADN02014532
EMBL:AADN02014533 IPI:IPI00577280 Ensembl:ENSGALT00000013874
ArrayExpress:F1P0D1 Uniprot:F1P0D1
Length = 600
Score = 250 (93.1 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 117 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 176
Query: 186 RFQKCLEVGMKLEVSSQS 203
R +KCLE+GMK+E S QS
Sbjct: 177 RLKKCLEMGMKME-SVQS 193
>UNIPROTKB|F1N3S3 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050965 "detection of temperature stimulus involved in
sensory perception of pain" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:DAAA02019082 IPI:IPI00705246 RefSeq:XP_002688591.2
RefSeq:XP_002704762.2 Ensembl:ENSBTAT00000014791 GeneID:100296331
KEGG:bta:100296331 Uniprot:F1N3S3
Length = 412
Score = 245 (91.3 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 50/118 (42%), Positives = 66/118 (55%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIAATPE------HPDTKE--GIEELCPVCGDKVSGY 140
PGGG + AG Y P +A+P P +E G++ C VCGDK SG
Sbjct: 11 PGGGGDTNGVDKAG-GY-PRAAEEDSASPPGAASDAEPGDEERPGLQVDCVVCGDKSSGK 68
Query: 141 HYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
HYG+ TCE CK FFKR+++ YTC + R C ID+ R +C +CR +KC VGM+ E
Sbjct: 69 HYGVFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKE 126
>UNIPROTKB|E1B9Y6 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051321 "meiotic cell cycle" evidence=IEA] [GO:0048520
"positive regulation of behavior" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0007283 GO:GO:0021549 GO:GO:0030522 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 GeneTree:ENSGT00700000104390 CTD:7182
KO:K08544 OMA:KADVQRP EMBL:DAAA02054598 IPI:IPI00714058
RefSeq:NP_001178990.1 UniGene:Bt.57739 PRIDE:E1B9Y6
Ensembl:ENSBTAT00000018228 GeneID:505531 KEGG:bta:505531
NextBio:20867182 Uniprot:E1B9Y6
Length = 611
Score = 250 (93.1 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 128 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFC 187
Query: 186 RFQKCLEVGMKLEVSSQS 203
R +KCLE+GMK+E S QS
Sbjct: 188 RLKKCLEMGMKME-SVQS 204
>UNIPROTKB|E2RI85 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051321 "meiotic cell cycle" evidence=IEA]
[GO:0048520 "positive regulation of behavior" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0040019 "positive
regulation of embryonic development" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0007283 GO:GO:0006351 GO:GO:0021549 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 GeneTree:ENSGT00700000104390
OMA:KADVQRP EMBL:AAEX03012056 Ensembl:ENSCAFT00000007359
NextBio:20858740 Uniprot:E2RI85
Length = 629
Score = 250 (93.1 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 126 IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFC 185
+ E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FC
Sbjct: 146 VVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFC 205
Query: 186 RFQKCLEVGMKLEVSSQS 203
R +KCLE+GMK+E S QS
Sbjct: 206 RLKKCLEMGMKME-SVQS 222
>UNIPROTKB|H0YLS5 [details] [associations]
symbol:RORA "Nuclear receptor ROR-alpha" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
GO:GO:0003700 GO:GO:0006351 EMBL:AC087385 EMBL:AC009560
EMBL:AC012404 EMBL:AC022898 EMBL:AC079068 EMBL:AC107241
EMBL:AC107905 HGNC:HGNC:10258 ChiTaRS:RORA Ensembl:ENST00000559343
Bgee:H0YLS5 Uniprot:H0YLS5
Length = 153
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 41/79 (51%), Positives = 54/79 (68%)
Query: 118 EHPDTKEGIEEL-CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
+ P IE + C +CGDK SG HYG++TCE CKGFF+R+ Q+ Y+C +++C ID+
Sbjct: 62 KRPAATAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDR 121
Query: 177 TQRKRCPFCRFQKCLEVGM 195
T R RC CR QKCL VGM
Sbjct: 122 TSRNRCQHCRLQKCLAVGM 140
>MGI|MGI:104661 [details] [associations]
symbol:Rora "RAR-related orphan receptor alpha" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006809 "nitric
oxide biosynthetic process" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IMP] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0043030 "regulation
of macrophage activation" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;ISO;IDA] [GO:0046068 "cGMP metabolic process"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:104661 GO:GO:0005654 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0030522 GO:GO:0006809
GO:GO:0021702 GO:GO:0046068 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0043030 eggNOG:NOG324222
GeneTree:ENSGT00700000104109 CTD:6095 HOGENOM:HOG000010200
HOVERGEN:HBG106848 KO:K08532 OMA:VAAQIEI ChiTaRS:RORA EMBL:U53228
EMBL:Y08640 EMBL:Z82994 EMBL:S82720 EMBL:D45910 EMBL:BC003757
IPI:IPI00122512 IPI:IPI00395039 PIR:S68517 RefSeq:NP_038674.1
UniGene:Mm.378450 UniGene:Mm.391890 UniGene:Mm.427266
UniGene:Mm.490614 ProteinModelPortal:P51448 SMR:P51448
DIP:DIP-35351N IntAct:P51448 STRING:P51448 PhosphoSite:P51448
PRIDE:P51448 Ensembl:ENSMUST00000034766 Ensembl:ENSMUST00000113624
GeneID:19883 KEGG:mmu:19883 InParanoid:P51448 OrthoDB:EOG4GHZP3
NextBio:297388 Bgee:P51448 CleanEx:MM_RORA Genevestigator:P51448
GermOnline:ENSMUSG00000032238 Uniprot:P51448
Length = 523
Score = 248 (92.4 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 51/111 (45%), Positives = 65/111 (58%)
Query: 87 QSPGGGSTNMDLSSA-GISY-HPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGL 144
++PG G SS+ GIS HTS I P C +CGDK SG HYG+
Sbjct: 40 EAPGAGRRQSYASSSRGISVTKKTHTSQIEIIP------------CKICGDKSSGIHYGV 87
Query: 145 LTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
+TCE CKGFF+R+ Q+ Y+C +++C ID+T R RC CR QKCL VGM
Sbjct: 88 ITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGM 138
>MGI|MGI:97857 [details] [associations]
symbol:Rarb "retinoic acid receptor, beta" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0001657 "ureteric bud
development" evidence=IMP] [GO:0003417 "growth plate cartilage
development" evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0008144 "drug binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IGI] [GO:0021756 "striatum development" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0031641 "regulation of
myelination" evidence=ISO] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IMP] [GO:0032403 "protein
complex binding" evidence=ISO] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IGI] [GO:0035264 "multicellular organism
growth" evidence=IGI] [GO:0043065 "positive regulation of apoptotic
process" evidence=IGI] [GO:0043068 "positive regulation of
programmed cell death" evidence=IGI] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0048048 "embryonic eye morphogenesis"
evidence=IGI] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=ISO] [GO:0048566 "embryonic digestive tract
development" evidence=ISO] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IMP] [GO:0061037 "negative
regulation of cartilage development" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:97857 GO:GO:0005634 GO:GO:0008285
GO:GO:0022008 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0000122 GO:GO:0043065
GO:GO:0048566 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0001657 GO:GO:0021756 GO:GO:0032331 GO:GO:0003417
HOVERGEN:HBG005606 GO:GO:0003708 GO:GO:0061037 PDB:1XDK PDBsum:1XDK
GO:GO:0055012 eggNOG:NOG297448 HOGENOM:HOG000010312
OrthoDB:EOG4F7NK7 CTD:5915 KO:K08528 OMA:QEVFVCI EMBL:X56574
EMBL:X56569 EMBL:X56573 EMBL:S56660 EMBL:S92180 IPI:IPI00130386
IPI:IPI00230346 IPI:IPI00230347 IPI:IPI00230348 PIR:S05051
RefSeq:NP_035373.1 UniGene:Mm.259318 ProteinModelPortal:P22605
SMR:P22605 IntAct:P22605 STRING:P22605 PRIDE:P22605
Ensembl:ENSMUST00000063750 GeneID:218772 KEGG:mmu:218772
UCSC:uc007xvc.1 InParanoid:P22605 BindingDB:P22605
ChEMBL:CHEMBL3266 EvolutionaryTrace:P22605 NextBio:376409
Bgee:P22605 CleanEx:MM_RARB Genevestigator:P22605
GermOnline:ENSMUSG00000017491 Uniprot:P22605
Length = 482
Score = 247 (92.0 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 43/99 (43%), Positives = 59/99 (59%)
Query: 100 SAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQ 159
+A I + + +P P + + C VC DK SGYHYG+ CE CKGFF+R++Q
Sbjct: 85 NAAIETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQ 144
Query: 160 NKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
+YTC +++C I+K R RC +CR QKC EVGM E
Sbjct: 145 KNMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKE 183
>RGD|1583230 [details] [associations]
symbol:Rarg "retinoic acid receptor, gamma" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0002063 "chondrocyte development" evidence=ISO] [GO:0003417
"growth plate cartilage development" evidence=ISO] [GO:0003430
"growth plate cartilage chondrocyte growth" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IMP] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA;ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010468 "regulation of gene expression" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0031641 "regulation of myelination" evidence=IDA] [GO:0032331
"negative regulation of chondrocyte differentiation"
evidence=IEA;ISO] [GO:0032526 "response to retinoic acid"
evidence=ISO] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043068 "positive regulation of
programmed cell death" evidence=ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046965 "retinoid X receptor binding" evidence=IEA;ISO]
[GO:0048048 "embryonic eye morphogenesis" evidence=IEA;ISO]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=ISO;IMP] [GO:0048608 "reproductive structure development"
evidence=ISO] [GO:0048732 "gland development" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060348 "bone
development" evidence=ISO] [GO:0060349 "bone morphogenesis"
evidence=ISO] [GO:0060429 "epithelium development" evidence=ISO]
[GO:0060534 "trachea cartilage development" evidence=IEA;ISO]
[GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA;ISO] [GO:0061037 "negative regulation of cartilage
development" evidence=IEA;ISO] [GO:0070384 "Harderian gland
development" evidence=IEA;ISO] [GO:0071300 "cellular response to
retinoic acid" evidence=IEP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:1583230 GO:GO:0008285 GO:GO:0009952
GO:GO:0046872 GO:GO:0008284 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 GO:GO:0005667 GO:GO:0000122
GO:GO:0043065 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 GO:GO:0031641 GO:GO:0003708 CTD:5916
GO:GO:0070384 GO:GO:0061037 GeneTree:ENSGT00680000099662 KO:K08529
GO:GO:0003430 GO:GO:0060534 IPI:IPI00914166 RefSeq:NP_001128722.1
UniGene:Rn.198797 Ensembl:ENSRNOT00000016801 GeneID:685072
KEGG:rno:685072 UCSC:RGD:1583230 ChEMBL:CHEMBL2630 NextBio:728895
ArrayExpress:D3ZWV0 Uniprot:D3ZWV0
Length = 485
Score = 247 (92.0 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 42/86 (48%), Positives = 57/86 (66%)
Query: 113 IAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
+ ++P P + + C VC DK SGYHYG+ +CE CKGFF+R++Q VYTC +++C
Sbjct: 101 VPSSPSPPPPPR-VYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNC 159
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLE 198
I+K R RC +CR QKC EVGM E
Sbjct: 160 IINKVTRNRCQYCRLQKCFEVGMSKE 185
>WB|WBGene00004786 [details] [associations]
symbol:sex-1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0007538
"primary sex determination" evidence=IGI;IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0042464 "dosage compensation by hypoactivation of
X chromosome" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0002119 GO:GO:0046872 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0010171 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0040035 GO:GO:0000977 EMBL:U13074 EMBL:Z50858 PIR:T22154
RefSeq:NP_001024662.1 UniGene:Cel.17916 ProteinModelPortal:P41830
SMR:P41830 DIP:DIP-24967N IntAct:P41830 STRING:P41830
EnsemblMetazoa:F44A6.2.1 EnsemblMetazoa:F44A6.2.2 GeneID:181231
KEGG:cel:CELE_F44A6.2 UCSC:F44A6.2.1 CTD:181231 WormBase:F44A6.2
eggNOG:NOG266867 GeneTree:ENSGT00700000104361 InParanoid:P41830
KO:K08701 OMA:SIQRKID NextBio:913018 ArrayExpress:P41830
GO:GO:0042464 GO:GO:0007538 Uniprot:P41830
Length = 534
Score = 248 (92.4 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 53/154 (34%), Positives = 79/154 (51%)
Query: 44 QMQHSNNDTQSSQLSPMLGNNTXXXXXXXXYNFNNM--VDNSYLFQSPGGGSTNMDLSSA 101
Q+Q+ + QS NN Y FNN+ ++ + + S + +S
Sbjct: 70 QIQNGSTAAQSGN-----ANNYADPLSHRRY-FNNVNGYNHHQFYDTASQASVSSPATSV 123
Query: 102 GISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNK 161
S P + + T + + I C VCGDK SGYHYG+ +CE CKGFF+R++Q K
Sbjct: 124 TSSLSPPDSLSNGHTTQRHHIGKAIS-FCKVCGDKASGYHYGVTSCEGCKGFFRRSIQRK 182
Query: 162 KVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
Y C+ ++ C I + R RC +CRF+KCL+ GM
Sbjct: 183 IDYRCLKQQVCEIKRESRNRCQYCRFKKCLDSGM 216
>UNIPROTKB|F1S962 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050965 "detection of temperature stimulus involved in
sensory perception of pain" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:CU914416 RefSeq:XP_003123537.1 UniGene:Ssc.1893
Ensembl:ENSSSCT00000015156 GeneID:100516724 KEGG:ssc:100516724
Uniprot:F1S962
Length = 414
Score = 244 (91.0 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 49/114 (42%), Positives = 64/114 (56%)
Query: 90 GGGSTNMDLSSAGISYHPFHTSTI---AATPEHPDTKE--GIEELCPVCGDKVSGYHYGL 144
GGG TN + G S AA+ P +E G++ C VCGDK SG HYG+
Sbjct: 15 GGGDTNGVDKAGGYPRAAEEDSASPPGAASDAEPGDEERPGLQVDCVVCGDKSSGKHYGV 74
Query: 145 LTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TCE CK FFKR+++ YTC + R C ID+ R +C +CR +KC VGM+ E
Sbjct: 75 FTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKE 128
>ZFIN|ZDB-GENE-080403-8 [details] [associations]
symbol:nr2c2 "nuclear receptor subfamily 2, group C,
member 2" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-080403-8 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 eggNOG:NOG297520 GeneTree:ENSGT00700000104390
HOVERGEN:HBG008596 HOGENOM:HOG000013058 CTD:7182 KO:K08544
OMA:KADVQRP OrthoDB:EOG4Z36D8 EMBL:FP017199 IPI:IPI00511238
RefSeq:NP_001116766.1 UniGene:Dr.160181 SMR:B0UXU0
Ensembl:ENSDART00000011597 Ensembl:ENSDART00000125232 GeneID:569321
KEGG:dre:569321 NextBio:20889621 Uniprot:B0UXU0
Length = 623
Score = 249 (92.7 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 44/76 (57%), Positives = 55/76 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
E C VCGDK SG HYG ++CE CKGFFKR+V+ Y+C + + C I+K R RC FCR
Sbjct: 145 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKSLTYSCRSNQDCVINKHHRNRCQFCRL 204
Query: 188 QKCLEVGMKLEVSSQS 203
+KCLE+GMK+E S QS
Sbjct: 205 RKCLEMGMKME-SVQS 219
>UNIPROTKB|E2R3D0 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA] [GO:0048666
"neuron development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:AAEX03012299 EMBL:AAEX03012298 RefSeq:XP_852412.1
Ensembl:ENSCAFT00000024566 GeneID:609720 KEGG:cfa:609720
NextBio:20895307 Uniprot:E2R3D0
Length = 416
Score = 244 (91.0 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 49/114 (42%), Positives = 64/114 (56%)
Query: 90 GGGSTNMDLSSAGISYHPFHTSTI---AATPEHPDTKE--GIEELCPVCGDKVSGYHYGL 144
GGG TN + G S AA+ P +E G++ C VCGDK SG HYG+
Sbjct: 16 GGGDTNGVDKAGGYPRAAEEDSASPPGAASDAEPGDEERPGLQVDCVVCGDKSSGKHYGV 75
Query: 145 LTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
TCE CK FFKR+++ YTC + R C ID+ R +C +CR +KC VGM+ E
Sbjct: 76 FTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKE 129
>UNIPROTKB|F1N056 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 IPI:IPI00710549
OMA:DKGQGQP EMBL:DAAA02021281 Ensembl:ENSBTAT00000023401
Uniprot:F1N056
Length = 353
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C VCGDK SG+HYG TCE CK FFKR+V+ YTC A R+C ID+ R +C +CR +K
Sbjct: 16 CVVCGDKSSGHHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKK 75
Query: 190 CLEVGMKLE 198
CL+VGM+ E
Sbjct: 76 CLKVGMRRE 84
>ZFIN|ZDB-GENE-040724-215 [details] [associations]
symbol:rorcb "RAR-related orphan receptor C b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040724-215 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000010200 HOVERGEN:HBG106848 EMBL:DQ017628
IPI:IPI00498218 UniGene:Dr.12904 InParanoid:Q1L678 Uniprot:Q1L678
Length = 480
Score = 246 (91.7 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ QN +Y+C +R+C ID+T R RC CR QK
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRNRCQHCRLQK 69
Query: 190 CLEVGM 195
CL +GM
Sbjct: 70 CLALGM 75
>ZFIN|ZDB-GENE-990415-250 [details] [associations]
symbol:rorca "RAR-related orphan receptor C a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-250 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00700000104109 EMBL:CR450766 IPI:IPI00844980
ProteinModelPortal:F1QGI9 Ensembl:ENSDART00000100484 Bgee:F1QGI9
Uniprot:F1QGI9
Length = 480
Score = 246 (91.7 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ QN +Y+C +R+C ID+T R RC CR QK
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCIIDRTNRNRCQHCRLQK 69
Query: 190 CLEVGM 195
CL +GM
Sbjct: 70 CLALGM 75
>UNIPROTKB|Q07869 [details] [associations]
symbol:PPARA "Peroxisome proliferator-activated receptor
alpha" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0006631 "fatty acid metabolic process" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0008544
"epidermis development" evidence=IEA] [GO:0019902 "phosphatase
binding" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0032091 "negative regulation of protein
binding" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0032868 "response to insulin stimulus"
evidence=IEA] [GO:0035095 "behavioral response to nicotine"
evidence=IEA] [GO:0042060 "wound healing" evidence=IEA] [GO:0042157
"lipoprotein metabolic process" evidence=IEA] [GO:0045776 "negative
regulation of blood pressure" evidence=IEA] [GO:0051525 "NFAT
protein binding" evidence=IEA] [GO:0070166 "enamel mineralization"
evidence=IEA] [GO:0097371 "MDM2/MDM4 family protein binding"
evidence=IEA] [GO:1901215 "negative regulation of neuron death"
evidence=IEA] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=TAS] [GO:0008144 "drug binding" evidence=IDA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0032099 "negative
regulation of appetite" evidence=ISS] [GO:0032000 "positive
regulation of fatty acid beta-oxidation" evidence=TAS] [GO:0015908
"fatty acid transport" evidence=TAS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0008289 "lipid binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0006629 "lipid metabolic process" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0010745 "negative regulation of
macrophage derived foam cell differentiation" evidence=IC;IDA]
[GO:0010887 "negative regulation of cholesterol storage"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0010871
"negative regulation of receptor biosynthetic process"
evidence=IDA] [GO:0010891 "negative regulation of sequestering of
triglyceride" evidence=IDA] [GO:0046321 "positive regulation of
fatty acid oxidation" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0031624 "ubiquitin
conjugating enzyme binding" evidence=IPI] [GO:0072366 "regulation
of cellular ketone metabolic process by positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045820 "negative regulation of glycolysis" evidence=IC]
[GO:0003707 "steroid hormone receptor activity" evidence=IDA]
[GO:0072369 "regulation of lipid transport by positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0072363 "regulation of glycolysis by positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IDA] Reactome:REACT_71
Reactome:REACT_111217 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003074 InterPro:IPR003076
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01289
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005654 GO:GO:0007507 GO:GO:0046872 GO:GO:0008144
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001666
EMBL:CH471138 GO:GO:0045776 GO:GO:0006631 GO:GO:0015908
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0042157 GO:GO:0010887
GO:GO:0010745 GO:GO:0032868 GO:GO:0032000 GO:GO:0000122
GO:GO:0010891 GO:GO:0008289 GO:GO:0042060 GO:GO:0008544
GO:GO:0070166 GO:GO:0006367 DrugBank:DB01076 DrugBank:DB00641
Reactome:REACT_24941 GO:GO:0032099 eggNOG:NOG266867
DrugBank:DB01241 DrugBank:DB00636 DrugBank:DB01393 GO:GO:0045820
GO:GO:0072363 GO:GO:0072369 PDB:1K7L PDB:2NPA PDB:2P54 PDB:3ET1
PDB:3FEI PDB:3G8I PDBsum:1K7L PDBsum:2NPA PDBsum:2P54 PDBsum:3ET1
PDBsum:3FEI PDBsum:3G8I PDB:1KKQ PDBsum:1KKQ GO:GO:0010871
EMBL:AL078611 CTD:5465 HOGENOM:HOG000261626 HOVERGEN:HBG106004
KO:K07294 OMA:ICPLSPL OrthoDB:EOG4FFD1Q GO:GO:0072366 EMBL:L02932
EMBL:S74349 EMBL:Y07619 EMBL:AB307690 EMBL:EU650667 EMBL:CR456547
EMBL:AK289821 EMBL:CR457435 EMBL:AY206718 EMBL:AL049856
IPI:IPI00020097 PIR:A49289 PIR:I56603 RefSeq:NP_001001928.1
RefSeq:NP_005027.2 UniGene:Hs.103110 UniGene:Hs.710044 PDB:1I7G
PDB:2REW PDB:2ZNN PDB:3KDT PDB:3KDU PDB:3SP6 PDB:3VI8 PDBsum:1I7G
PDBsum:2REW PDBsum:2ZNN PDBsum:3KDT PDBsum:3KDU PDBsum:3SP6
PDBsum:3VI8 ProteinModelPortal:Q07869 SMR:Q07869 DIP:DIP-241N
IntAct:Q07869 MINT:MINT-232229 STRING:Q07869 PhosphoSite:Q07869
DMDM:3041727 PRIDE:Q07869 DNASU:5465 Ensembl:ENST00000262735
Ensembl:ENST00000396000 Ensembl:ENST00000402126
Ensembl:ENST00000407236 GeneID:5465 KEGG:hsa:5465 UCSC:uc003bgw.1
GeneCards:GC22P046546 HGNC:HGNC:9232 MIM:170998 neXtProt:NX_Q07869
PharmGKB:PA280 InParanoid:Q07869 PhylomeDB:Q07869 BindingDB:Q07869
ChEMBL:CHEMBL239 DrugBank:DB01039 EvolutionaryTrace:Q07869
GenomeRNAi:5465 NextBio:21152 ArrayExpress:Q07869 Bgee:Q07869
CleanEx:HS_PPARA Genevestigator:Q07869 GermOnline:ENSG00000186951
Uniprot:Q07869
Length = 468
Score = 245 (91.3 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 53/114 (46%), Positives = 63/114 (55%)
Query: 84 YLFQSPGG-GSTNMD-LSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYH 141
YL PG GS D LS A + + E P IE C +CGDK SGYH
Sbjct: 56 YLGSCPGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIE--CRICGDKASGYH 113
Query: 142 YGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
YG+ CE CKGFF+RT++ K VY +RSC I K R +C +CRF KCL VGM
Sbjct: 114 YGVHACEGCKGFFRRTIRLKLVYD-KCDRSCKIQKKNRNKCQYCRFHKCLSVGM 166
>UNIPROTKB|Q92753 [details] [associations]
symbol:RORB "Nuclear receptor ROR-beta" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0042462 "eye
photoreceptor cell development" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0045893 GO:GO:0005654 GO:GO:0007420
GO:GO:0046872 GO:GO:0007623 GO:GO:0007601 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006367 GO:GO:0042462
eggNOG:NOG324222 GO:GO:0008502 HOGENOM:HOG000010200
HOVERGEN:HBG106848 EMBL:Y08639 EMBL:BX647070 EMBL:AL137018
IPI:IPI00023259 IPI:IPI00827604 RefSeq:NP_008845.2
UniGene:Hs.494178 ProteinModelPortal:Q92753 SMR:Q92753
STRING:Q92753 PhosphoSite:Q92753 DMDM:124028630 PRIDE:Q92753
DNASU:6096 Ensembl:ENST00000376896 Ensembl:ENST00000396204
GeneID:6096 KEGG:hsa:6096 UCSC:uc004aji.3 CTD:6096
GeneCards:GC09P077112 HGNC:HGNC:10259 HPA:HPA008393 MIM:601972
neXtProt:NX_Q92753 PharmGKB:PA34631 InParanoid:Q92753 KO:K08533
OMA:SGHTMRA OrthoDB:EOG4KH2TT ChiTaRS:RORB GenomeRNAi:6096
NextBio:23713 ArrayExpress:Q92753 Bgee:Q92753 CleanEx:HS_RORB
Genevestigator:Q92753 GermOnline:ENSG00000198963 Uniprot:Q92753
Length = 470
Score = 245 (91.3 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 42/76 (55%), Positives = 53/76 (69%)
Query: 121 DTKEGIEEL-CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
D IE + C +CGDK SG HYG++TCE CKGFF+R+ QN Y+C +R+C ID+T R
Sbjct: 11 DATAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNR 70
Query: 180 KRCPFCRFQKCLEVGM 195
RC CR QKCL +GM
Sbjct: 71 NRCQHCRLQKCLALGM 86
>MGI|MGI:1343464 [details] [associations]
symbol:Rorb "RAR-related orphan receptor beta" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008502 "melatonin receptor activity"
evidence=ISO] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IEA] [GO:0042462 "eye photoreceptor
cell development" evidence=IMP] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1343464 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0046872 GO:GO:0007623
GO:GO:0007601 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0030522 GO:GO:0042462 eggNOG:NOG324222
GeneTree:ENSGT00700000104109 GO:GO:0008502 HOGENOM:HOG000010200
HOVERGEN:HBG106848 CTD:6096 KO:K08533 OMA:SGHTMRA OrthoDB:EOG4KH2TT
EMBL:BC024842 EMBL:BC058269 EMBL:DQ779923 EMBL:DQ779924
EMBL:AB258405 IPI:IPI00153341 IPI:IPI00788322 RefSeq:NP_001036819.1
RefSeq:NP_666207.3 UniGene:Mm.276747 ProteinModelPortal:Q8R1B8
SMR:Q8R1B8 STRING:Q8R1B8 PhosphoSite:Q8R1B8 PRIDE:Q8R1B8
Ensembl:ENSMUST00000040153 Ensembl:ENSMUST00000112828
Ensembl:ENSMUST00000112832 GeneID:225998 KEGG:mmu:225998
UCSC:uc008gyc.1 UCSC:uc008gyd.1 NextBio:377911 Bgee:Q8R1B8
CleanEx:MM_RORB Genevestigator:Q8R1B8 GermOnline:ENSMUSG00000036192
Uniprot:Q8R1B8
Length = 470
Score = 245 (91.3 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 43/81 (53%), Positives = 56/81 (69%)
Query: 120 PDTK-EGIEEL----CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHI 174
P TK +G ++ C +CGDK SG HYG++TCE CKGFF+R+ QN Y+C +R+C I
Sbjct: 6 PKTKADGTAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLI 65
Query: 175 DKTQRKRCPFCRFQKCLEVGM 195
D+T R RC CR QKCL +GM
Sbjct: 66 DRTNRNRCQHCRLQKCLALGM 86
>UNIPROTKB|E2R2A6 [details] [associations]
symbol:RARB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0061037 "negative regulation of cartilage
development" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0048048 "embryonic
eye morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0032331 "negative regulation of chondrocyte
differentiation" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003417
"growth plate cartilage development" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0008285 GO:GO:0022008
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0043065 GO:GO:0048566 GO:GO:0035264
GO:GO:0035116 GO:GO:0048048 GO:GO:0001657 GO:GO:0021756
GO:GO:0032331 GO:GO:0003417 GO:GO:0003708 GO:GO:0061037
GO:GO:0055012 GeneTree:ENSGT00680000099662 CTD:5915 KO:K08528
OMA:QEVFVCI EMBL:AAEX03013556 RefSeq:XP_850755.1
Ensembl:ENSCAFT00000009235 GeneID:477045 KEGG:cfa:477045
NextBio:20852594 Uniprot:E2R2A6
Length = 448
Score = 244 (91.0 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 41/86 (47%), Positives = 55/86 (63%)
Query: 113 IAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
+ +P P + + C VC DK SGYHYG+ CE CKGFF+R++Q +YTC +++C
Sbjct: 64 LVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNC 123
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLE 198
I+K R RC +CR QKC EVGM E
Sbjct: 124 VINKVTRNRCQYCRLQKCFEVGMSKE 149
>ZFIN|ZDB-GENE-070314-1 [details] [associations]
symbol:rargb "retinoic acid receptor, gamma b"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-070314-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448 OrthoDB:EOG4F7NK7
EMBL:EF028131 IPI:IPI00679293 RefSeq:NP_001076779.1
UniGene:Dr.135572 ProteinModelPortal:A2T928 SMR:A2T928
STRING:A2T928 GeneID:100034753 KEGG:dre:100034753 CTD:100034753
NextBio:20788475 Uniprot:A2T928
Length = 489
Score = 245 (91.3 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 42/86 (48%), Positives = 57/86 (66%)
Query: 113 IAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSC 172
I ++P P + + C VC DK SGYHYG+ +CE CKGFF+R++Q VYTC +++C
Sbjct: 49 IPSSPSPPPPPR-VYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNC 107
Query: 173 HIDKTQRKRCPFCRFQKCLEVGMKLE 198
I+K R RC +CR +KC EVGM E
Sbjct: 108 QINKVTRNRCQYCRLRKCFEVGMSKE 133
>UNIPROTKB|F1SJB4 [details] [associations]
symbol:RORB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GO:GO:0042462
GeneTree:ENSGT00700000104109 OMA:SGHTMRA EMBL:CU468713
EMBL:CU062494 Ensembl:ENSSSCT00000005803 Uniprot:F1SJB4
Length = 452
Score = 243 (90.6 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ QN Y+C +R+C ID+T R RC CR QK
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 69
Query: 190 CLEVGM 195
CL +GM
Sbjct: 70 CLALGM 75
>UNIPROTKB|P10588 [details] [associations]
symbol:NR2F6 "Nuclear receptor subfamily 2 group F member
6" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043153 "entrainment of circadian clock by
photoperiod" evidence=IEA] [GO:0048666 "neuron development"
evidence=IEA] [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=TAS] [GO:0004887 "thyroid hormone
receptor activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0000122 GO:GO:0048666 EMBL:CH471106 GO:GO:0006367
GO:GO:0043153 GO:GO:0004887 HOGENOM:HOG000260820 HOVERGEN:HBG005606
EMBL:X12794 EMBL:AK314961 EMBL:BC002669 EMBL:BC063018 EMBL:BC084544
IPI:IPI00021429 PIR:S02709 RefSeq:NP_005225.2 UniGene:Hs.466148
ProteinModelPortal:P10588 SMR:P10588 IntAct:P10588 STRING:P10588
PhosphoSite:P10588 DMDM:23503053 PRIDE:P10588
Ensembl:ENST00000291442 GeneID:2063 KEGG:hsa:2063 UCSC:uc002nfq.3
CTD:2063 GeneCards:GC19M017342 HGNC:HGNC:7977 MIM:132880
neXtProt:NX_P10588 PharmGKB:PA31760 eggNOG:NOG277317
InParanoid:P10588 KO:K08549 OMA:DPNGGTN OrthoDB:EOG4FN4HT
PhylomeDB:P10588 ChEMBL:CHEMBL1961791 GenomeRNAi:2063 NextBio:8381
ArrayExpress:P10588 Bgee:P10588 CleanEx:HS_NR2F6
Genevestigator:P10588 GermOnline:ENSG00000160113 Uniprot:P10588
Length = 404
Score = 241 (89.9 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 48/115 (41%), Positives = 65/115 (56%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTI---AATPEHPDTKE--GIEELCPVCGDKVSGYHYG 143
PGG + +D + G S AA+ P +E G++ C VCGDK SG HYG
Sbjct: 11 PGGDTNGVD-KAGGYPRAAEDDSASPPGAASDAEPGDEERPGLQVDCVVCGDKSSGKHYG 69
Query: 144 LLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
+ TCE CK FFKR+++ YTC + R C ID+ R +C +CR +KC VGM+ E
Sbjct: 70 VFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKE 124
>UNIPROTKB|Q98934 [details] [associations]
symbol:RORB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 eggNOG:NOG324222 GeneTree:ENSGT00700000104109
HOGENOM:HOG000010200 HOVERGEN:HBG106848 CTD:6096 KO:K08533
OrthoDB:EOG4KH2TT EMBL:AADN02059739 EMBL:AADN02059740
EMBL:AADN02059741 EMBL:AADN02059742 EMBL:AADN02059743
EMBL:AADN02059744 EMBL:AADN02059745 EMBL:AADN02059746
EMBL:AADN02059747 EMBL:AADN02059748 EMBL:AADN02059749
EMBL:AADN02059750 EMBL:Y08638 IPI:IPI00597298 RefSeq:NP_990424.1
UniGene:Gga.581 HSSP:P45446 SMR:Q98934 STRING:Q98934
Ensembl:ENSGALT00000024445 GeneID:395980 KEGG:gga:395980
NextBio:20816045 Uniprot:Q98934
Length = 459
Score = 243 (90.6 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ QN Y+C +R+C ID+T R RC CR QK
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 69
Query: 190 CLEVGM 195
CL +GM
Sbjct: 70 CLALGM 75
>UNIPROTKB|F1MWS0 [details] [associations]
symbol:RORB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GO:GO:0042462
GeneTree:ENSGT00700000104109 CTD:6096 KO:K08533 OMA:SGHTMRA
EMBL:DAAA02022913 EMBL:DAAA02022911 EMBL:DAAA02022912
IPI:IPI00709815 RefSeq:NP_001179587.1 UniGene:Bt.51697
Ensembl:ENSBTAT00000028921 GeneID:528382 KEGG:bta:528382
NextBio:20874809 Uniprot:F1MWS0
Length = 459
Score = 243 (90.6 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ QN Y+C +R+C ID+T R RC CR QK
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 69
Query: 190 CLEVGM 195
CL +GM
Sbjct: 70 CLALGM 75
>ZFIN|ZDB-GENE-061204-2 [details] [associations]
symbol:rorb "RAR-related orphan receptor B"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-061204-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GeneTree:ENSGT00700000104109
OMA:SGHTMRA EMBL:BX537293 EMBL:CU929335 IPI:IPI00489649
Ensembl:ENSDART00000089748 Bgee:F1R6M2 Uniprot:F1R6M2
Length = 466
Score = 243 (90.6 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ QN Y+C +R+C ID+T R RC CR QK
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 69
Query: 190 CLEVGM 195
CL +GM
Sbjct: 70 CLALGM 75
>UNIPROTKB|F1NRA6 [details] [associations]
symbol:PPARA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003074
InterPro:IPR003076 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01288 PRINTS:PR01289 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00700000104361 EMBL:AADN02006773 EMBL:AADN02006774
EMBL:AADN02006775 EMBL:AADN02006776 EMBL:AADN02006777
EMBL:AADN02006778 EMBL:AADN02006779 IPI:IPI00593462
Ensembl:ENSGALT00000037308 ArrayExpress:F1NRA6 Uniprot:F1NRA6
Length = 468
Score = 243 (90.6 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 51/113 (45%), Positives = 64/113 (56%)
Query: 85 LFQSPGG-GSTNMDLSSAGISYHPFHTSTIAAT-PEHPDTKEGIEELCPVCGDKVSGYHY 142
L PG GS D S S + +T + E P IE C +CGDK SGYHY
Sbjct: 57 LGNGPGSDGSVITDTLSPASSPSSINFATAPGSIDESPSGALNIE--CRICGDKASGYHY 114
Query: 143 GLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
G+ CE CKGFF+RT++ K +Y +R+C I K R +C +CRFQKCL VGM
Sbjct: 115 GVHACEGCKGFFRRTIRLKLIYD-KCDRNCKIQKKNRNKCQYCRFQKCLSVGM 166
>UNIPROTKB|E1C5M3 [details] [associations]
symbol:RORB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042462 "eye photoreceptor
cell development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GeneTree:ENSGT00700000104109
OMA:SGHTMRA EMBL:AADN02059739 EMBL:AADN02059740 EMBL:AADN02059741
EMBL:AADN02059742 EMBL:AADN02059743 EMBL:AADN02059744
EMBL:AADN02059745 EMBL:AADN02059746 EMBL:AADN02059747
EMBL:AADN02059748 EMBL:AADN02059749 EMBL:AADN02059750
IPI:IPI00594386 Ensembl:ENSGALT00000024446 ArrayExpress:E1C5M3
Uniprot:E1C5M3
Length = 470
Score = 243 (90.6 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ QN Y+C +R+C ID+T R RC CR QK
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 77
Query: 190 CLEVGM 195
CL +GM
Sbjct: 78 CLALGM 83
>UNIPROTKB|Q5EA13 [details] [associations]
symbol:PPARA "Peroxisome proliferative activated receptor,
alpha isoform 1" species:9913 "Bos taurus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0019217 "regulation of fatty acid metabolic process"
evidence=ISS] [GO:0008544 "epidermis development" evidence=ISS]
[GO:0006631 "fatty acid metabolic process" evidence=ISS]
[GO:0004872 "receptor activity" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0072369 "regulation of lipid transport
by positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0072366 "regulation of cellular ketone
metabolic process by positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0072363 "regulation of
glycolysis by positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0070166 "enamel
mineralization" evidence=IEA] [GO:0046321 "positive regulation of
fatty acid oxidation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0032099 "negative regulation of appetite"
evidence=IEA] [GO:0031624 "ubiquitin conjugating enzyme binding"
evidence=IEA] [GO:0010891 "negative regulation of sequestering of
triglyceride" evidence=IEA] [GO:0010887 "negative regulation of
cholesterol storage" evidence=IEA] [GO:0010871 "negative regulation
of receptor biosynthetic process" evidence=IEA] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0008144 "drug binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003074 InterPro:IPR003076
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01289
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0008144 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0004872
GO:GO:0006631 GO:GO:0003700 GO:GO:0019217 GO:GO:0046321
GO:GO:0010887 GO:GO:0000122 GO:GO:0010891 GO:GO:0042060
GO:GO:0008544 GO:GO:0070166 GO:GO:0032099 eggNOG:NOG266867
GeneTree:ENSGT00700000104361 GO:GO:0072363 GO:GO:0072369
GO:GO:0010871 CTD:5465 HOGENOM:HOG000261626 HOVERGEN:HBG106004
KO:K07294 OMA:ICPLSPL OrthoDB:EOG4FFD1Q GO:GO:0072366
EMBL:DAAA02014949 EMBL:DAAA02014950 EMBL:DAAA02014951
EMBL:DAAA02014952 EMBL:BT020756 IPI:IPI00699935
RefSeq:NP_001029208.1 UniGene:Bt.18241 SMR:Q5EA13 STRING:Q5EA13
Ensembl:ENSBTAT00000010606 GeneID:281992 KEGG:bta:281992
InParanoid:Q5EA13 NextBio:20805860 Uniprot:Q5EA13
Length = 470
Score = 243 (90.6 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 52/120 (43%), Positives = 65/120 (54%)
Query: 78 NMVDNSYLFQSPGG-GSTNMD-LSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGD 135
+ + YL PG GS D LS A + + + E IE C +CGD
Sbjct: 52 SFTEYQYLGSGPGSDGSVITDTLSPASSPSSVSYPAVPGSAEESSSIALNIE--CRICGD 109
Query: 136 KVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
K SGYHYG+ CE CKGFF+RT++ K VY +RSC I K R +C +CRF KCL VGM
Sbjct: 110 KASGYHYGVHACEGCKGFFRRTIRLKLVYD-KCDRSCKIQKKNRNKCQYCRFHKCLSVGM 168
>UNIPROTKB|F1PET8 [details] [associations]
symbol:RORB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042462 "eye
photoreceptor cell development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GO:GO:0042462 GeneTree:ENSGT00700000104109 OMA:SGHTMRA
EMBL:AAEX03000553 EMBL:AAEX03000554 Ensembl:ENSCAFT00000036494
Uniprot:F1PET8
Length = 470
Score = 243 (90.6 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ QN Y+C +R+C ID+T R RC CR QK
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 80
Query: 190 CLEVGM 195
CL +GM
Sbjct: 81 CLALGM 86
>RGD|1306778 [details] [associations]
symbol:Rorb "RAR-related orphan receptor B" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007420 "brain development" evidence=IEP]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008502 "melatonin receptor activity"
evidence=IDA] [GO:0009725 "response to hormone stimulus"
evidence=IEP] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA;ISO;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO;ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:1306778 GO:GO:0005634 GO:GO:0045893 GO:GO:0007420
GO:GO:0046872 GO:GO:0007623 GO:GO:0007601 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0009725
GO:GO:0030522 GO:GO:0042462 eggNOG:NOG324222 GO:GO:0008502 PDB:1K4W
PDB:1N4H PDB:1NQ7 PDBsum:1K4W PDBsum:1N4H PDBsum:1NQ7
HOGENOM:HOG000010200 HOVERGEN:HBG106848 OrthoDB:EOG4KH2TT
EMBL:L14610 IPI:IPI00208302 IPI:IPI00829487 PIR:I65219
UniGene:Rn.231652 ProteinModelPortal:P45446 SMR:P45446
STRING:P45446 PhosphoSite:P45446 UCSC:RGD:1306778 InParanoid:P45446
EvolutionaryTrace:P45446 ArrayExpress:P45446 Genevestigator:P45446
GermOnline:ENSRNOG00000013413 Uniprot:P45446
Length = 470
Score = 243 (90.6 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ QN Y+C +R+C ID+T R RC CR QK
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 80
Query: 190 CLEVGM 195
CL +GM
Sbjct: 81 CLALGM 86
>UNIPROTKB|P45446 [details] [associations]
symbol:Rorb "Nuclear receptor ROR-beta" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:1306778 GO:GO:0005634 GO:GO:0045893 GO:GO:0007420
GO:GO:0046872 GO:GO:0007623 GO:GO:0007601 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0009725
GO:GO:0030522 GO:GO:0042462 eggNOG:NOG324222 GO:GO:0008502 PDB:1K4W
PDB:1N4H PDB:1NQ7 PDBsum:1K4W PDBsum:1N4H PDBsum:1NQ7
HOGENOM:HOG000010200 HOVERGEN:HBG106848 OrthoDB:EOG4KH2TT
EMBL:L14610 IPI:IPI00208302 IPI:IPI00829487 PIR:I65219
UniGene:Rn.231652 ProteinModelPortal:P45446 SMR:P45446
STRING:P45446 PhosphoSite:P45446 UCSC:RGD:1306778 InParanoid:P45446
EvolutionaryTrace:P45446 ArrayExpress:P45446 Genevestigator:P45446
GermOnline:ENSRNOG00000013413 Uniprot:P45446
Length = 470
Score = 243 (90.6 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ QN Y+C +R+C ID+T R RC CR QK
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQK 80
Query: 190 CLEVGM 195
CL +GM
Sbjct: 81 CLALGM 86
>UNIPROTKB|F1NX54 [details] [associations]
symbol:PPARA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003074
InterPro:IPR003076 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01288 PRINTS:PR01289 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00700000104361 EMBL:AADN02006773 EMBL:AADN02006774
EMBL:AADN02006775 EMBL:AADN02006776 EMBL:AADN02006777
EMBL:AADN02006778 EMBL:AADN02006779 IPI:IPI00818507
ProteinModelPortal:F1NX54 Ensembl:ENSGALT00000023026 OMA:PCKINIA
ArrayExpress:F1NX54 Uniprot:F1NX54
Length = 474
Score = 243 (90.6 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 51/113 (45%), Positives = 64/113 (56%)
Query: 85 LFQSPGG-GSTNMDLSSAGISYHPFHTSTIAAT-PEHPDTKEGIEELCPVCGDKVSGYHY 142
L PG GS D S S + +T + E P IE C +CGDK SGYHY
Sbjct: 59 LGNGPGSDGSVITDTLSPASSPSSINFATAPGSIDESPSGALNIE--CRICGDKASGYHY 116
Query: 143 GLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
G+ CE CKGFF+RT++ K +Y +R+C I K R +C +CRFQKCL VGM
Sbjct: 117 GVHACEGCKGFFRRTIRLKLIYD-KCDRNCKIQKKNRNKCQYCRFQKCLSVGM 168
>UNIPROTKB|Q6GN21 [details] [associations]
symbol:nr2c1-a "Nuclear receptor subfamily 2 group C member
1-A" species:8355 "Xenopus laevis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 HSSP:P03372 EMBL:BC073700 EMBL:AF013295
RefSeq:NP_001084198.1 UniGene:Xl.21534 ProteinModelPortal:Q6GN21
SMR:Q6GN21 GeneID:399361 KEGG:xla:399361 CTD:399361
Xenbase:XB-GENE-6254030 HOVERGEN:HBG008596 KO:K08543 Uniprot:Q6GN21
Length = 637
Score = 246 (91.7 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
ELC VCGDK SG HYG +TCE CKGFFKR+++ VYTC + C I+K R RC +CR
Sbjct: 150 ELCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRL 209
Query: 188 QKCLEVGMK 196
Q+C+ +GMK
Sbjct: 210 QRCMSLGMK 218
>UNIPROTKB|K7GL45 [details] [associations]
symbol:NR3C1 "Glucocorticoid receptor" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GeneTree:ENSGT00700000104072 EMBL:CU928713
Ensembl:ENSSSCT00000036693 Uniprot:K7GL45
Length = 379
Score = 239 (89.2 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 45/96 (46%), Positives = 58/96 (60%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VC D+ SG HYG+LTC SCK FFKR V+ + Y C C IDK +RK CP CR+
Sbjct: 21 KLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRY 80
Query: 188 QKCLEVGMKLEV--SSQSTHGVVVIWSPHSPSISEN 221
+KCL+ GM LE + + G+ + S SEN
Sbjct: 81 RKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSEN 116
>UNIPROTKB|B7Z7I2 [details] [associations]
symbol:NR3C1 "cDNA FLJ50281, highly similar to
Glucocorticoid receptor" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOVERGEN:HBG007583 EMBL:AC004782
EMBL:AC091925 UniGene:Hs.122926 HGNC:HGNC:7978 ChiTaRS:NR3C1
EMBL:AK302050 IPI:IPI00976066 SMR:B7Z7I2 STRING:B7Z7I2
Ensembl:ENST00000416954 UCSC:uc011dbk.2 Uniprot:B7Z7I2
Length = 380
Score = 239 (89.2 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 45/96 (46%), Positives = 58/96 (60%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
+LC VC D+ SG HYG+LTC SCK FFKR V+ + Y C C IDK +RK CP CR+
Sbjct: 22 KLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRY 81
Query: 188 QKCLEVGMKLEV--SSQSTHGVVVIWSPHSPSISEN 221
+KCL+ GM LE + + G+ + S SEN
Sbjct: 82 RKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSEN 117
>UNIPROTKB|E2QX37 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048386 "positive regulation of retinoic acid
receptor signaling pathway" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 GeneTree:ENSGT00700000104390 KO:K08543 CTD:7181
OMA:QNSNEMS EMBL:AAEX03009951 RefSeq:XP_854792.1
ProteinModelPortal:E2QX37 Ensembl:ENSCAFT00000010109 GeneID:611980
KEGG:cfa:611980 NextBio:20897515 Uniprot:E2QX37
Length = 605
Score = 245 (91.3 bits), Expect = 6.6e-20, P = 6.6e-20
Identities = 54/171 (31%), Positives = 84/171 (49%)
Query: 31 QQLLSAATGAQTPQ----MQHSNNDTQSSQLSPMLGNNTXXXXXXXXYNFNNMVDNSYLF 86
QQ+ T QT Q + +++TQ Q +L N+ + +
Sbjct: 14 QQMGEIVTEQQTGQKIQIVTALDHNTQGKQF--ILTNHDGSTPSKVILSRQDSTPGKVFL 71
Query: 87 QSPGGGSTN-MDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLL 145
+P N + ++ +S T ++P+ K + +LC VCGDK SG HYG +
Sbjct: 72 TTPDAAGVNQLFFTTPDLSAQHLQLLTDNSSPDQGPNK--VFDLCVVCGDKASGRHYGAV 129
Query: 146 TCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMK 196
TCE CKGFFKR+++ VY+C + C I+K R RC +CR Q+C+ GM+
Sbjct: 130 TCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMR 180
>UNIPROTKB|I3LTD1 [details] [associations]
symbol:I3LTD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001628
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00670000097927 EMBL:CU468031
EMBL:CU618320 EMBL:CU633370 Ensembl:ENSSSCT00000029437
Uniprot:I3LTD1
Length = 134
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 36/76 (47%), Positives = 55/76 (72%)
Query: 120 PDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQR 179
PD + + C +CGD+ +G HYG+++CE CKGFFKR++ NK+VY C +++C + + QR
Sbjct: 51 PDDRAE-QRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQR 109
Query: 180 KRCPFCRFQKCLEVGM 195
RC +CR KCL++GM
Sbjct: 110 NRCQYCRLLKCLQMGM 125
>UNIPROTKB|Q28CK1 [details] [associations]
symbol:nr2c1 "Nuclear receptor subfamily 2 group C member
1" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0000122
GO:GO:0030522 eggNOG:NOG297520 HOVERGEN:HBG008596 KO:K08543
CTD:7181 HOGENOM:HOG000013058 OrthoDB:EOG476JZT EMBL:CR926338
EMBL:BC123034 RefSeq:NP_001016207.1 UniGene:Str.15706 HSSP:P33242
ProteinModelPortal:Q28CK1 SMR:Q28CK1 STRING:Q28CK1 GeneID:548961
KEGG:xtr:548961 Xenbase:XB-GENE-484727 Bgee:Q28CK1 Uniprot:Q28CK1
Length = 636
Score = 245 (91.3 bits), Expect = 7.3e-20, P = 7.3e-20
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
ELC VCGDK SG HYG +TCE CKGFFKR+++ VYTC + C I+K R RC +CR
Sbjct: 150 ELCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRL 209
Query: 188 QKCLEVGMK 196
Q+C+ +GMK
Sbjct: 210 QRCIALGMK 218
>UNIPROTKB|Q66J63 [details] [associations]
symbol:nr2c1-b "Nuclear receptor subfamily 2 group C member
1-B" species:8355 "Xenopus laevis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 HSSP:P03372 HOVERGEN:HBG008596
KO:K08543 EMBL:BC081046 RefSeq:NP_001087654.1 UniGene:Xl.7293
ProteinModelPortal:Q66J63 SMR:Q66J63 GeneID:447478 KEGG:xla:447478
CTD:447478 Xenbase:XB-GENE-865413 Uniprot:Q66J63
Length = 637
Score = 245 (91.3 bits), Expect = 7.3e-20, P = 7.3e-20
Identities = 39/69 (56%), Positives = 50/69 (72%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
ELC VCGDK SG HYG +TCE CKGFFKR+++ +YTC + C I+K R RC +CR
Sbjct: 150 ELCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLIYTCRGSKDCVINKHYRNRCQYCRL 209
Query: 188 QKCLEVGMK 196
Q+C+ +GMK
Sbjct: 210 QRCISLGMK 218
>UNIPROTKB|C9JU32 [details] [associations]
symbol:ESRRG "Estrogen-related receptor gamma" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOGENOM:HOG000233467 EMBL:AL445650 EMBL:AL512650
EMBL:AC096635 EMBL:AC096634 EMBL:AL391216 EMBL:AL512626
EMBL:AL513312 EMBL:AL603752 HGNC:HGNC:3474 ChiTaRS:ESRRG
IPI:IPI00946882 ProteinModelPortal:C9JU32 SMR:C9JU32 STRING:C9JU32
Ensembl:ENST00000475275 ArrayExpress:C9JU32 Bgee:C9JU32
Uniprot:C9JU32
Length = 354
Score = 236 (88.1 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 41/72 (56%), Positives = 49/72 (68%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 102 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 161
Query: 187 FQKCLEVGMKLE 198
F KCL+VGM E
Sbjct: 162 FMKCLKVGMLKE 173
>UNIPROTKB|E2RGP7 [details] [associations]
symbol:RORC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072539 "T-helper 17 cell differentiation"
evidence=IEA] [GO:0048537 "mucosal-associated lymphoid tissue
development" evidence=IEA] [GO:0048535 "lymph node development"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006468
GO:GO:0033077 GO:GO:0030522 GO:GO:0048535
GeneTree:ENSGT00700000104109 GO:GO:0048537 GO:GO:0072539
OMA:AFPPLYK EMBL:AAEX03011059 Ensembl:ENSCAFT00000020479
Uniprot:E2RGP7
Length = 518
Score = 243 (90.6 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 44/90 (48%), Positives = 56/90 (62%)
Query: 106 HPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYT 165
H +AA H E I C +CGDK SG HYG++TCE CKGFF+R+ Q VY+
Sbjct: 9 HRASQELLAAKKTHTSQIEVIP--CKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVVYS 66
Query: 166 CVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
C +++C ID+T R RC CR QKCL +GM
Sbjct: 67 CTRQQNCPIDRTSRNRCQHCRLQKCLALGM 96
>ZFIN|ZDB-GENE-040426-855 [details] [associations]
symbol:rorab "RAR-related orphan receptor A,
paralog b" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040426-855 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 eggNOG:NOG324222 GeneTree:ENSGT00700000104109
HOGENOM:HOG000010200 HOVERGEN:HBG106848 EMBL:BX927082 EMBL:BC159203
IPI:IPI00619432 UniGene:Dr.107956 SMR:B0JZJ5
Ensembl:ENSDART00000099477 Uniprot:B0JZJ5
Length = 492
Score = 242 (90.2 bits), Expect = 8.2e-20, P = 8.2e-20
Identities = 42/74 (56%), Positives = 52/74 (70%)
Query: 123 KEGIEEL-CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
K IE + C +CGDK SG HYG++TCE CKGFF+R+ Q Y+C ++SC ID+T R R
Sbjct: 9 KAQIESIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQGTVSYSCPRQKSCLIDRTSRNR 68
Query: 182 CPFCRFQKCLEVGM 195
C CR QKCL VGM
Sbjct: 69 CQHCRLQKCLAVGM 82
>UNIPROTKB|F1N0I2 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9913 "Bos taurus" [GO:0048386 "positive regulation of
retinoic acid receptor signaling pathway" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 GeneTree:ENSGT00700000104390 IPI:IPI00685366
UniGene:Bt.28215 OMA:QNSNEMS EMBL:DAAA02012799 PRIDE:F1N0I2
Ensembl:ENSBTAT00000023577 Uniprot:F1N0I2
Length = 608
Score = 244 (91.0 bits), Expect = 8.5e-20, P = 8.5e-20
Identities = 52/160 (32%), Positives = 79/160 (49%)
Query: 38 TGAQTPQMQHSNNDTQSSQLSPMLGNNTXXXXXXXXYNFNNMVDNSYLFQSPGGGSTN-M 96
TG + + +++TQ Q +L N+ + F +P N +
Sbjct: 25 TGQKIQIVTALDHNTQGKQF--ILTNHDGSTPNKVILARQDSTPGKVFFTTPDAAGVNQL 82
Query: 97 DLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKR 156
++ +S T ++ E K + +LC VCGDK SG HYG +TCE CKGFFKR
Sbjct: 83 FFTTPDLSTQQLQFLTDNSSSEQGPNK--VFDLCVVCGDKASGRHYGAVTCEGCKGFFKR 140
Query: 157 TVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMK 196
+++ VY+C + C I+K R RC +CR Q+C+ GMK
Sbjct: 141 SIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMK 180
>UNIPROTKB|Q2KIF4 [details] [associations]
symbol:NR1I3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005829 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00680000099585 HOVERGEN:HBG108655
HOGENOM:HOG000220844 CTD:9970 eggNOG:NOG251788 KO:K08541
OMA:PRDRFLY OrthoDB:EOG4CVG7C EMBL:DAAA02006955 EMBL:BC112658
IPI:IPI00700075 RefSeq:NP_001073236.1 UniGene:Bt.37359 SMR:Q2KIF4
STRING:Q2KIF4 Ensembl:ENSBTAT00000012145 GeneID:493711
KEGG:bta:493711 InParanoid:Q2KIF4 NextBio:20865459 Uniprot:Q2KIF4
Length = 348
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 38/70 (54%), Positives = 48/70 (68%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C VCGD+ +GYH+ LTCE CKGFF+RTV TC SC ++K QR+ CP CR QK
Sbjct: 11 CAVCGDRATGYHFHALTCEGCKGFFRRTVNKSTSLTCPFAGSCEVNKAQRRHCPACRLQK 70
Query: 190 CLEVGMKLEV 199
CL+ GMK ++
Sbjct: 71 CLDAGMKKDM 80
>UNIPROTKB|P62045 [details] [associations]
symbol:NR1I3 "Nuclear receptor subfamily 1 group I member
3" species:9719 "Pusa sibirica" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0005856 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0004887 HOVERGEN:HBG108655 EMBL:AB109553
ProteinModelPortal:P62045 SMR:P62045 Uniprot:P62045
Length = 348
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 39/70 (55%), Positives = 48/70 (68%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C VCGD+ +GYH+ LTCE CKGFF+RTV TC SC ++K QR+ CP CR QK
Sbjct: 11 CMVCGDRATGYHFHALTCEGCKGFFRRTVSKNTGLTCPFAGSCKVNKAQRRHCPACRLQK 70
Query: 190 CLEVGMKLEV 199
CL+ GMK E+
Sbjct: 71 CLDAGMKKEM 80
>RGD|69305 [details] [associations]
symbol:Nr2f2 "nuclear receptor subfamily 2, group F, member 2"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001701 "in utero embryonic development" evidence=ISO]
[GO:0001764 "neuron migration" evidence=IEA;ISO] [GO:0001893
"maternal placenta development" evidence=IEA;ISO] [GO:0001937
"negative regulation of endothelial cell proliferation"
evidence=IEA;ISO] [GO:0001972 "retinoic acid binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0009956 "radial pattern
formation" evidence=IEA;ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA;ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=ISO]
[GO:0030900 "forebrain development" evidence=IEA;ISO] [GO:0032355
"response to estradiol stimulus" evidence=IEP] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045736
"negative regulation of cyclin-dependent protein serine/threonine
kinase activity" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0048514 "blood vessel morphogenesis" evidence=IEA;ISO]
[GO:0060173 "limb development" evidence=IEA;ISO] [GO:0060674
"placenta blood vessel development" evidence=IEA;ISO] [GO:0060707
"trophoblast giant cell differentiation" evidence=IEA;ISO]
[GO:0060849 "regulation of transcription involved in lymphatic
endothelial cell fate commitment" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:69305 GO:GO:0005634 GO:GO:0001764 GO:GO:0045893
GO:GO:0032355 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0000122
GO:GO:0001937 GO:GO:0060173 GO:GO:0045736 GO:GO:0010596
GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:7026
KO:K08548 OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956 GO:GO:0060849
EMBL:AF003944 IPI:IPI00192619 RefSeq:NP_542956.1 UniGene:Rn.17815
ProteinModelPortal:O09018 SMR:O09018 STRING:O09018
PhosphoSite:O09018 Ensembl:ENSRNOT00000014152 GeneID:113984
KEGG:rno:113984 UCSC:RGD:69305 InParanoid:O09018 NextBio:618125
ArrayExpress:O09018 Genevestigator:O09018
GermOnline:ENSRNOG00000010308 Uniprot:O09018
Length = 414
Score = 239 (89.2 bits), Expect = 9.4e-20, P = 9.4e-20
Identities = 53/129 (41%), Positives = 70/129 (54%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIA-ATPEHP--DTKEGIEEL-CPVCGDKVSGYHYGL 144
PG T G + P T+ + P P D ++ + + C VCGDK SG HYG
Sbjct: 34 PGAPHTPQTPGQGGPASTPAQTAAGSQGGPGGPGSDKQQQQQHIECVVCGDKSSGKHYGQ 93
Query: 145 LTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV----- 199
TCE CK FFKR+V+ YTC A R+C ID+ R +C +CR +KCL+VGM+ E
Sbjct: 94 FTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGR 153
Query: 200 --SSQSTHG 206
+Q THG
Sbjct: 154 MPPTQPTHG 162
>UNIPROTKB|O09018 [details] [associations]
symbol:Nr2f2 "COUP transcription factor 2" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:69305 GO:GO:0005634 GO:GO:0001764
GO:GO:0045893 GO:GO:0032355 GO:GO:0009952 GO:GO:0046872
eggNOG:NOG327099 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900
GO:GO:0000122 GO:GO:0001937 GO:GO:0060173 GO:GO:0045736
GO:GO:0010596 GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606
CTD:7026 KO:K08548 OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956
GO:GO:0060849 EMBL:AF003944 IPI:IPI00192619 RefSeq:NP_542956.1
UniGene:Rn.17815 ProteinModelPortal:O09018 SMR:O09018 STRING:O09018
PhosphoSite:O09018 Ensembl:ENSRNOT00000014152 GeneID:113984
KEGG:rno:113984 UCSC:RGD:69305 InParanoid:O09018 NextBio:618125
ArrayExpress:O09018 Genevestigator:O09018
GermOnline:ENSRNOG00000010308 Uniprot:O09018
Length = 414
Score = 239 (89.2 bits), Expect = 9.4e-20, P = 9.4e-20
Identities = 53/129 (41%), Positives = 70/129 (54%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIA-ATPEHP--DTKEGIEEL-CPVCGDKVSGYHYGL 144
PG T G + P T+ + P P D ++ + + C VCGDK SG HYG
Sbjct: 34 PGAPHTPQTPGQGGPASTPAQTAAGSQGGPGGPGSDKQQQQQHIECVVCGDKSSGKHYGQ 93
Query: 145 LTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV----- 199
TCE CK FFKR+V+ YTC A R+C ID+ R +C +CR +KCL+VGM+ E
Sbjct: 94 FTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGR 153
Query: 200 --SSQSTHG 206
+Q THG
Sbjct: 154 MPPTQPTHG 162
>UNIPROTKB|E2QW41 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060849 "regulation of transcription involved
in lymphatic endothelial cell fate commitment" evidence=IEA]
[GO:0060707 "trophoblast giant cell differentiation" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060173 "limb development" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001972
"retinoic acid binding" evidence=IEA] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AAEX03002267
Ensembl:ENSCAFT00000012887 NextBio:20854275 Uniprot:E2QW41
Length = 394
Score = 238 (88.8 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 53/129 (41%), Positives = 69/129 (53%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIA-ATPEHP--DTKEGIEEL-CPVCGDKVSGYHYGL 144
PG T G + P T+ P P D ++ + + C VCGDK SG HYG
Sbjct: 34 PGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGGDKQQQQQHIECVVCGDKSSGKHYGQ 93
Query: 145 LTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV----- 199
TCE CK FFKR+V+ YTC A R+C ID+ R +C +CR +KCL+VGM+ E
Sbjct: 94 FTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGR 153
Query: 200 --SSQSTHG 206
+Q THG
Sbjct: 154 MPPTQPTHG 162
>ZFIN|ZDB-GENE-040616-4 [details] [associations]
symbol:esrrgb "estrogen-related receptor gamma b"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040616-4 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104391
EMBL:BX004824 IPI:IPI00502886 Ensembl:ENSDART00000122258
ArrayExpress:F1QRG9 Bgee:F1QRG9 Uniprot:F1QRG9
Length = 444
Score = 240 (89.5 bits), Expect = 9.6e-20, P = 9.6e-20
Identities = 48/117 (41%), Positives = 61/117 (52%)
Query: 82 NSYLFQSPGGGSTNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYH 141
+SY P G +D ++ + P A G + LC VCGD SG+H
Sbjct: 62 SSYS-SGPKGNLAGLDSPASYLRSAPCRLLEEAQAKGEYGLSSGPKRLCLVCGDVASGFH 120
Query: 142 YGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
YG+ +CE+CK FFKRT+Q Y+C R C I K +RK C CRF KCL VGM E
Sbjct: 121 YGVASCEACKAFFKRTIQGNIEYSCSVSRDCEITKRRRKSCQACRFTKCLSVGMLRE 177
>UNIPROTKB|Q26622 [details] [associations]
symbol:SHR2 "Orphan steroid hormone receptor 2"
species:7668 "Strongylocentrotus purpuratus" [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005652 "nuclear lamina" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0048471 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045177
GO:GO:0030522 GO:GO:0005652 eggNOG:NOG297520 KO:K14031 EMBL:U38281
EMBL:U38528 EMBL:U38529 RefSeq:NP_001116968.1 UniGene:Spu.209
ProteinModelPortal:Q26622 SMR:Q26622 GeneID:373398 KEGG:spu:373398
CTD:373398 Uniprot:Q26622
Length = 583
Score = 243 (90.6 bits), Expect = 9.9e-20, P = 9.9e-20
Identities = 40/69 (57%), Positives = 49/69 (71%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
ELC VCGDK SG HYG ++CE CKGFFKR+++ YTC + C I K R RC +CR
Sbjct: 85 ELCAVCGDKASGRHYGAISCEGCKGFFKRSIRKHLGYTCRGNKDCQIIKHNRNRCQYCRL 144
Query: 188 QKCLEVGMK 196
QKCL++GMK
Sbjct: 145 QKCLDMGMK 153
>WB|WBGene00022423 [details] [associations]
symbol:nhr-41 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0019915 GeneTree:ENSGT00700000104390 EMBL:FO081581
EMBL:FO080407 RefSeq:NP_500073.2 ProteinModelPortal:Q3V5L2
SMR:Q3V5L2 EnsemblMetazoa:Y104H12A.1 GeneID:190865
KEGG:cel:CELE_Y104H12A.1 UCSC:Y104H12A.1 CTD:190865
WormBase:Y104H12A.1 InParanoid:Q3V5L2 OMA:MEHIWRM NextBio:947228
ArrayExpress:Q3V5L2 Uniprot:Q3V5L2
Length = 657
Score = 244 (91.0 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 44/108 (40%), Positives = 67/108 (62%)
Query: 95 NMDLSSAGISYHPFHTSTIAATPEHP----DTKEGIEELCPVCGDKVSGYHYGLLTCESC 150
N+ LS+A + ++++P+H + E ELC VCGDK SG HYG ++CE C
Sbjct: 158 NVQLSNANTMAN---LQNMSSSPKHTNGSSERSENCGELCVVCGDKASGRHYGAVSCEGC 214
Query: 151 KGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLE 198
KGFFKR+++ + Y C +++ C + K R RC +CR +KCL +GM+ E
Sbjct: 215 KGFFKRSIRKRIGYVCRSQKDCPVTKFHRNRCQYCRLRKCLSMGMRSE 262
>ZFIN|ZDB-GENE-080403-3 [details] [associations]
symbol:nr1h5 "nuclear receptor subfamily 1, group H,
member 5" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-080403-3 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00680000099585 EMBL:BX321886 IPI:IPI00482173
Ensembl:ENSDART00000064040 ArrayExpress:F1Q660 Bgee:F1Q660
Uniprot:F1Q660
Length = 490
Score = 241 (89.9 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 43/80 (53%), Positives = 52/80 (65%)
Query: 119 HPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQ 178
H +G +ELC VCGDK SGYHY LTCE CKGFF+R+V K VY C + SC +D
Sbjct: 119 HGARVKGQDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYHCKSGGSCEMDMYM 178
Query: 179 RKRCPFCRFQKCLEVGMKLE 198
R++C CR +KC VGM E
Sbjct: 179 RRKCQDCRLRKCRAVGMLAE 198
>UNIPROTKB|F1LZZ3 [details] [associations]
symbol:Rora "Protein Rora" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:1308419 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0030522 GO:GO:0006809 GO:GO:0021702 GO:GO:0046068
GO:GO:0043030 GeneTree:ENSGT00700000104109 IPI:IPI00373337
Ensembl:ENSRNOT00000013142 ArrayExpress:F1LZZ3 Uniprot:F1LZZ3
Length = 457
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ Q+ Y+C +++C ID+T R RC CR QK
Sbjct: 7 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQK 66
Query: 190 CLEVGM 195
CL VGM
Sbjct: 67 CLAVGM 72
>UNIPROTKB|F1P5Z9 [details] [associations]
symbol:RORA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00700000104109 EMBL:AAEX03016182
Ensembl:ENSCAFT00000026448 Uniprot:F1P5Z9
Length = 458
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ Q+ Y+C +++C ID+T R RC CR QK
Sbjct: 8 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQK 67
Query: 190 CLEVGM 195
CL VGM
Sbjct: 68 CLAVGM 73
>FB|FBgn0035849 [details] [associations]
symbol:ERR "estrogen-related receptor" species:7227
"Drosophila melanogaster" [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 EMBL:AE014296
GO:GO:0005496 GO:GO:0046872 GO:GO:0005975 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 eggNOG:NOG282629
GeneTree:ENSGT00700000104391 HSSP:O95718 EMBL:AF359421
RefSeq:NP_648183.3 UniGene:Dm.882 SMR:Q8WS79 STRING:Q8WS79
EnsemblMetazoa:FBtr0076725 GeneID:38912 KEGG:dme:Dmel_CG7404
UCSC:CG7404-RB CTD:38912 FlyBase:FBgn0035849 InParanoid:Q8WS79
KO:K08703 OMA:VIGWAKQ OrthoDB:EOG4SXKV0 GenomeRNAi:38912
NextBio:810976 Uniprot:Q8WS79
Length = 496
Score = 241 (89.9 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 41/76 (53%), Positives = 52/76 (68%)
Query: 123 KEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRC 182
++ + LC VCGD SG+HYG+ +CE+CK FFKRT+Q YTC A C I+K +RK C
Sbjct: 120 RDELRRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNECEINKRRRKAC 179
Query: 183 PFCRFQKCLEVGMKLE 198
CRFQKCL +GM E
Sbjct: 180 QACRFQKCLLMGMLKE 195
>RGD|1308419 [details] [associations]
symbol:Rora "RAR-related orphan receptor A" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006809 "nitric oxide biosynthetic process"
evidence=ISO] [GO:0007623 "circadian rhythm" evidence=IEP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=ISO]
[GO:0043030 "regulation of macrophage activation" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046068 "cGMP metabolic
process" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:1308419 GO:GO:0005634 GO:GO:0046872
GO:GO:0007623 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0030522 GO:GO:0006809 GO:GO:0021702
GO:GO:0046068 GO:GO:0043030 IPI:IPI00780466
Ensembl:ENSRNOT00000057506 UCSC:RGD:1308419 ArrayExpress:F1M505
Uniprot:F1M505
Length = 466
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ Q+ Y+C +++C ID+T R RC CR QK
Sbjct: 16 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQK 75
Query: 190 CLEVGM 195
CL VGM
Sbjct: 76 CLAVGM 81
>UNIPROTKB|F1N7B3 [details] [associations]
symbol:RORC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072539 "T-helper 17 cell differentiation"
evidence=IEA] [GO:0048537 "mucosal-associated lymphoid tissue
development" evidence=IEA] [GO:0048535 "lymph node development"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006468
GO:GO:0033077 GO:GO:0030522 GO:GO:0048535
GeneTree:ENSGT00700000104109 GO:GO:0048537 GO:GO:0072539
OMA:AFPPLYK EMBL:DAAA02007247 IPI:IPI00687924 UniGene:Bt.49360
Ensembl:ENSBTAT00000044130 Uniprot:F1N7B3
Length = 506
Score = 241 (89.9 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 43/91 (47%), Positives = 56/91 (61%)
Query: 105 YHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
+H +AA H E I C +CGDK SG HYG++TCE CKGFF+R+ Q Y
Sbjct: 8 HHRASQELLAAKKTHTSQIEVIP--CKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVAY 65
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
+C +++C ID+T R RC CR QKCL +GM
Sbjct: 66 SCTRQQNCPIDRTSRNRCQHCRLQKCLALGM 96
>UNIPROTKB|F1S075 [details] [associations]
symbol:RORA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046068 "cGMP metabolic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043030 "regulation of
macrophage activation" evidence=IEA] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=IEA] [GO:0006809 "nitric
oxide biosynthetic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0030522
GO:GO:0006809 GO:GO:0021702 GO:GO:0046068 GO:GO:0043030
GeneTree:ENSGT00700000104109 OMA:VAAQIEI EMBL:CU571371
EMBL:CU618323 Ensembl:ENSSSCT00000005055 Uniprot:F1S075
Length = 506
Score = 241 (89.9 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 41/74 (55%), Positives = 53/74 (71%)
Query: 123 KEGIEEL-CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
K IE + C +CGDK SG HYG++TCE CKGFF+R+ Q+ Y+C +++C ID+T R R
Sbjct: 2 KAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNR 61
Query: 182 CPFCRFQKCLEVGM 195
C CR QKCL VGM
Sbjct: 62 CQHCRLQKCLAVGM 75
>UNIPROTKB|Q90733 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=ISS] [GO:0001972
"retinoic acid binding" evidence=ISS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 HOGENOM:HOG000260820
HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H CTD:7026 KO:K08548
GO:GO:0001972 EMBL:U00697 IPI:IPI00598209 PIR:I50689
RefSeq:NP_989752.1 UniGene:Gga.4445 ProteinModelPortal:Q90733
SMR:Q90733 STRING:Q90733 GeneID:386585 KEGG:gga:386585
InParanoid:Q90733 NextBio:20813947 Uniprot:Q90733
Length = 410
Score = 238 (88.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 47/104 (45%), Positives = 62/104 (59%)
Query: 111 STIAATPEHPDTKEGIEEL-CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAE 169
S A+ D ++ + + C VCGDK SG HYG TCE CK FFKR+V+ YTC A
Sbjct: 55 SNAASQQSQGDKQQQQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRAN 114
Query: 170 RSCHIDKTQRKRCPFCRFQKCLEVGMKLEV-------SSQSTHG 206
R+C ID+ R +C +CR +KCL+VGM+ E +Q THG
Sbjct: 115 RNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPTHG 158
>RGD|1595785 [details] [associations]
symbol:Rorc "RAR-related orphan receptor C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:1595785
GO:GO:0005634 GO:GO:0046872 GO:GO:0007623 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006468 GO:GO:0033077
GO:GO:0030522 GO:GO:0048535 GO:GO:0048537 GO:GO:0072539 OMA:AFPPLYK
EMBL:AC133978 IPI:IPI00370940 Ensembl:ENSRNOT00000028292
ArrayExpress:F1LRS6 Uniprot:F1LRS6
Length = 508
Score = 241 (89.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 43/91 (47%), Positives = 56/91 (61%)
Query: 105 YHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
+H +AA H E I C +CGDK SG HYG++TCE CKGFF+R+ Q Y
Sbjct: 8 HHRTSRELLAAKKTHTSQIEVIP--CKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVAY 65
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
+C +++C ID+T R RC CR QKCL +GM
Sbjct: 66 SCTRQQNCPIDRTSRNRCQHCRLQKCLALGM 96
>UNIPROTKB|F1NML9 [details] [associations]
symbol:RORA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006809 "nitric oxide
biosynthetic process" evidence=IEA] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=IEA] [GO:0043030
"regulation of macrophage activation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046068 "cGMP metabolic process"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003079 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0030522 GO:GO:0006809 GO:GO:0046068 GO:GO:0043030
GeneTree:ENSGT00700000104109 OMA:VAAQIEI EMBL:AADN02040416
IPI:IPI00581652 Ensembl:ENSGALT00000005967 Uniprot:F1NML9
Length = 469
Score = 240 (89.5 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ Q+ Y+C +++C ID+T R RC CR QK
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQK 77
Query: 190 CLEVGM 195
CL VGM
Sbjct: 78 CLAVGM 83
>UNIPROTKB|C9JDI9 [details] [associations]
symbol:NR6A1 "Nuclear receptor subfamily 6 group A member
1" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
GO:GO:0003700 GO:GO:0006351 EMBL:AL354928 HOGENOM:HOG000113847
EMBL:AL158075 EMBL:AL354979 IPI:IPI00413606 HGNC:HGNC:7985
ChiTaRS:NR6A1 EMBL:AL669818 ProteinModelPortal:C9JDI9 SMR:C9JDI9
STRING:C9JDI9 PRIDE:C9JDI9 Ensembl:ENST00000475178
ArrayExpress:C9JDI9 Bgee:C9JDI9 Uniprot:C9JDI9
Length = 233
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 34/69 (49%), Positives = 52/69 (75%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ C +CGD+ +G HYG+++CE CKGFFKR++ NK+VY C +++C + + QR RC +CR
Sbjct: 15 QRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCR 74
Query: 187 FQKCLEVGM 195
KCL++GM
Sbjct: 75 LLKCLQMGM 83
>MGI|MGI:104856 [details] [associations]
symbol:Rorc "RAR-related orphan receptor gamma" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IEA] [GO:0033077 "T cell
differentiation in thymus" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046632
"alpha-beta T cell differentiation" evidence=IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048535 "lymph node
development" evidence=IMP] [GO:0048537 "mucosal-associated lymphoid
tissue development" evidence=IMP] [GO:0072539 "T-helper 17 cell
differentiation" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:104856
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0006468 GO:GO:0033077 GO:GO:0030522
GO:GO:0048535 GeneTree:ENSGT00700000104109 HOGENOM:HOG000010200
HOVERGEN:HBG106848 CTD:6097 eggNOG:NOG317095 KO:K08534
GO:GO:0048537 GO:GO:0072539 EMBL:U43508 EMBL:AF019660 EMBL:AF019655
EMBL:AF019656 EMBL:AF019657 EMBL:AF019658 EMBL:AF019659 EMBL:U39071
EMBL:AF163668 EMBL:AJ132394 EMBL:BC014804 IPI:IPI00228543
IPI:IPI00311164 PIR:JC5375 RefSeq:NP_035411.2 UniGene:Mm.4372
ProteinModelPortal:P51450 SMR:P51450 DIP:DIP-59439N IntAct:P51450
STRING:P51450 PhosphoSite:P51450 PRIDE:P51450
Ensembl:ENSMUST00000029795 Ensembl:ENSMUST00000107292 GeneID:19885
KEGG:mmu:19885 InParanoid:P51450 OrthoDB:EOG4229JB
ChEMBL:CHEMBL1293231 NextBio:297392 Bgee:P51450 CleanEx:MM_RORC
Genevestigator:P51450 GermOnline:ENSMUSG00000028150 Uniprot:P51450
Length = 516
Score = 241 (89.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 43/91 (47%), Positives = 56/91 (61%)
Query: 105 YHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVY 164
+H +AA H E I C +CGDK SG HYG++TCE CKGFF+R+ Q Y
Sbjct: 8 HHRTSRELLAAKKTHTSQIEVIP--CKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVAY 65
Query: 165 TCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
+C +++C ID+T R RC CR QKCL +GM
Sbjct: 66 SCTRQQNCPIDRTSRNRCQHCRLQKCLALGM 96
>ZFIN|ZDB-GENE-060306-2 [details] [associations]
symbol:roraa "RAR-related orphan receptor A, paralog
a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-060306-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GeneTree:ENSGT00700000104109
EMBL:CABZ01027882 EMBL:CABZ01027883 EMBL:CABZ01027884
EMBL:CABZ01027885 EMBL:CU468885 IPI:IPI00995582
ProteinModelPortal:F1QLY4 Ensembl:ENSDART00000121449 Bgee:F1QLY4
Uniprot:F1QLY4
Length = 516
Score = 241 (89.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 41/74 (55%), Positives = 53/74 (71%)
Query: 123 KEGIEEL-CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
K IE + C +CGDK SG HYG++TCE CKGFF+R+ Q+ Y+C +++C ID+T R R
Sbjct: 58 KAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR 117
Query: 182 CPFCRFQKCLEVGM 195
C CR QKCL VGM
Sbjct: 118 CQHCRLQKCLAVGM 131
>UNIPROTKB|P24468 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001893 "maternal
placenta development" evidence=IEA] [GO:0007519 "skeletal muscle
tissue development" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009956 "radial pattern formation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0032355 "response to estradiol stimulus" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060674 "placenta blood vessel
development" evidence=IEA] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0001972 "retinoic acid
binding" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IC;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0006629 "lipid metabolic process"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IDA] [GO:0010596
"negative regulation of endothelial cell migration" evidence=IMP]
[GO:0001937 "negative regulation of endothelial cell proliferation"
evidence=IMP] [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IDA;TAS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0003714 GO:GO:0001764
Pathway_Interaction_DB:telomerasepathway GO:GO:0045893
GO:GO:0032355 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
Pathway_Interaction_DB:hnf3apathway GO:GO:0048514 GO:GO:0006629
GO:GO:0030900 GO:GO:0000122 GO:GO:0001937 EMBL:CH471101
GO:GO:0060173 GO:GO:0045736 GO:GO:0010596 GO:GO:0007519
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
UniGene:Hs.519445 CTD:7026 KO:K08548 OMA:GPPNNTQ GO:GO:0001972
GO:GO:0009956 GO:GO:0060849 EMBL:M64497 EMBL:U60477 EMBL:AB307711
EMBL:FM208183 EMBL:AK298824 EMBL:AK301595 EMBL:AK316086
EMBL:HQ692849 EMBL:HQ692850 EMBL:AC016251 EMBL:BC014664
EMBL:BC042897 EMBL:BC106083 EMBL:M62760 IPI:IPI00028611
IPI:IPI00789037 PIR:A37133 RefSeq:NP_001138627.1
RefSeq:NP_001138628.1 RefSeq:NP_001138629.1 RefSeq:NP_066285.1
UniGene:Hs.347991 PDB:3CJW PDBsum:3CJW ProteinModelPortal:P24468
SMR:P24468 DIP:DIP-29713N IntAct:P24468 MINT:MINT-1183332
STRING:P24468 PhosphoSite:P24468 DMDM:114203 PRIDE:P24468
Ensembl:ENST00000394166 Ensembl:ENST00000394171
Ensembl:ENST00000421109 Ensembl:ENST00000453270 GeneID:7026
KEGG:hsa:7026 UCSC:uc010uri.2 GeneCards:GC15P096869 HGNC:HGNC:7976
MIM:107773 neXtProt:NX_P24468 PharmGKB:PA31759 InParanoid:P24468
PhylomeDB:P24468 ChEMBL:CHEMBL1961790 EvolutionaryTrace:P24468
GenomeRNAi:7026 NextBio:27451 ArrayExpress:P24468 Bgee:P24468
CleanEx:HS_NR2F2 Genevestigator:P24468 GermOnline:ENSG00000185551
Uniprot:P24468
Length = 414
Score = 238 (88.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 53/129 (41%), Positives = 69/129 (53%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIA-ATPEHP--DTKEGIEEL-CPVCGDKVSGYHYGL 144
PG T G + P T+ P P D ++ + + C VCGDK SG HYG
Sbjct: 34 PGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQQQQHIECVVCGDKSSGKHYGQ 93
Query: 145 LTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV----- 199
TCE CK FFKR+V+ YTC A R+C ID+ R +C +CR +KCL+VGM+ E
Sbjct: 94 FTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGR 153
Query: 200 --SSQSTHG 206
+Q THG
Sbjct: 154 MPPTQPTHG 162
>UNIPROTKB|F1SCJ6 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IEA]
[GO:0060707 "trophoblast giant cell differentiation" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060173 "limb development" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001972
"retinoic acid binding" evidence=IEA] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0001764 GO:GO:0045893
GO:GO:0009952 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0048514
GO:GO:0030900 GO:GO:0000122 GO:GO:0001937 GO:GO:0060173
GO:GO:0045736 GO:GO:0010596 GO:GO:0007519 CTD:7026 KO:K08548
OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956 GO:GO:0060849 EMBL:CU407120
RefSeq:NP_001177181.1 UniGene:Ssc.8676 GeneID:100153983
KEGG:ssc:100153983 Ensembl:ENSSSCT00000002511 Uniprot:F1SCJ6
Length = 414
Score = 238 (88.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 53/129 (41%), Positives = 69/129 (53%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIA-ATPEHP--DTKEGIEEL-CPVCGDKVSGYHYGL 144
PG T G + P T+ P P D ++ + + C VCGDK SG HYG
Sbjct: 34 PGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGGDKQQQQQHIECVVCGDKSSGKHYGQ 93
Query: 145 LTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV----- 199
TCE CK FFKR+V+ YTC A R+C ID+ R +C +CR +KCL+VGM+ E
Sbjct: 94 FTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGR 153
Query: 200 --SSQSTHG 206
+Q THG
Sbjct: 154 MPPTQPTHG 162
>MGI|MGI:1352452 [details] [associations]
symbol:Nr2f2 "nuclear receptor subfamily 2, group F, member
2" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0001764 "neuron migration" evidence=IDA] [GO:0001893 "maternal
placenta development" evidence=IMP] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=ISO]
[GO:0001972 "retinoic acid binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009566
"fertilization" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=ISO]
[GO:0030900 "forebrain development" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IMP] [GO:0060173
"limb development" evidence=IMP] [GO:0060674 "placenta blood vessel
development" evidence=IMP] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IMP] [GO:0060849 "regulation of
transcription involved in lymphatic endothelial cell fate
commitment" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1352452 GO:GO:0005634
GO:GO:0001764 GO:GO:0045893 GO:GO:0032355 GO:GO:0009952
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0009566
GO:GO:0000122 GO:GO:0001937 GO:GO:0001893 GO:GO:0060173
GO:GO:0045736 GO:GO:0010596 GO:GO:0007519 HOGENOM:HOG000260820
HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H CTD:7026 KO:K08548 OMA:GPPNNTQ
GO:GO:0001972 GO:GO:0009956 GO:GO:0060849 EMBL:X76653 EMBL:U07635
EMBL:BC042484 IPI:IPI00117234 RefSeq:NP_033827.2 UniGene:Mm.158143
ProteinModelPortal:P43135 SMR:P43135 STRING:P43135
PhosphoSite:P43135 PaxDb:P43135 PRIDE:P43135
Ensembl:ENSMUST00000032768 GeneID:11819 KEGG:mmu:11819
InParanoid:P43135 NextBio:279711 Bgee:P43135 CleanEx:MM_NR2F2
Genevestigator:P43135 GermOnline:ENSMUSG00000030551 GO:GO:0001945
GO:GO:0060674 GO:GO:0060707 Uniprot:P43135
Length = 414
Score = 238 (88.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 53/129 (41%), Positives = 69/129 (53%)
Query: 89 PGGGSTNMDLSSAGISYHPFHTSTIA-ATPEHP--DTKEGIEEL-CPVCGDKVSGYHYGL 144
PG T G + P T+ P P D ++ + + C VCGDK SG HYG
Sbjct: 34 PGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQQQQHIECVVCGDKSSGKHYGQ 93
Query: 145 LTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMKLEV----- 199
TCE CK FFKR+V+ YTC A R+C ID+ R +C +CR +KCL+VGM+ E
Sbjct: 94 FTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGR 153
Query: 200 --SSQSTHG 206
+Q THG
Sbjct: 154 MPPTQPTHG 162
>UNIPROTKB|F2Z3S9 [details] [associations]
symbol:Nr2f1 "Protein Nr2f1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:621682 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 OMA:DKGQGQP IPI:IPI00554118
ProteinModelPortal:F2Z3S9 SMR:F2Z3S9 Ensembl:ENSRNOT00000020044
Uniprot:F2Z3S9
Length = 420
Score = 238 (88.8 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P +++ IE C VCGDK SG HYG TCE CK FFKR+V+ YTC A R+C ID+
Sbjct: 72 PGSGQSQQHIE--CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQ 129
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
R +C +CR +KCL+VGM+ E
Sbjct: 130 HHRNQCQYCRLKKCLKVGMRRE 151
>MGI|MGI:1352465 [details] [associations]
symbol:Nr2c1 "nuclear receptor subfamily 2, group C, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016605 "PML body" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048386 "positive regulation of retinoic acid receptor
signaling pathway" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1352465 GO:GO:0046872 GO:GO:0003677
GO:GO:0016605 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0048386 eggNOG:NOG297520
GeneTree:ENSGT00700000104390 HOVERGEN:HBG008596 KO:K08543 CTD:7181
OrthoDB:EOG476JZT OMA:QNSNEMS EMBL:U28280 EMBL:U28269 EMBL:U28270
EMBL:U28271 EMBL:U28272 EMBL:U28273 EMBL:U28274 EMBL:U28275
EMBL:U28276 EMBL:U28277 EMBL:U28278 EMBL:U28279 EMBL:U28265
EMBL:Y11436 EMBL:U30482 EMBL:L26957 EMBL:AK146891 EMBL:AK149374
EMBL:AC127596 EMBL:AC138026 EMBL:BC090662 EMBL:BC094580
IPI:IPI00314621 IPI:IPI00656276 RefSeq:NP_035759.3
UniGene:Mm.107483 ProteinModelPortal:Q505F1 SMR:Q505F1
DIP:DIP-29275N STRING:Q505F1 PhosphoSite:Q505F1 PaxDb:Q505F1
PRIDE:Q505F1 Ensembl:ENSMUST00000092213 Ensembl:ENSMUST00000099343
Ensembl:ENSMUST00000105290 GeneID:22025 KEGG:mmu:22025
InParanoid:Q0VGP8 NextBio:301764 Bgee:Q505F1 CleanEx:MM_NR2C1
Genevestigator:Q505F1 GermOnline:ENSMUSG00000005897 Uniprot:Q505F1
Length = 590
Score = 242 (90.2 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 41/82 (50%), Positives = 54/82 (65%)
Query: 116 TPEHPDTKEG-IEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHI 174
T + PD + +LC VCGDK SG HYG +TCE CKGFFKR+++ VY+C + C I
Sbjct: 86 TEKSPDQGPNKVFDLCVVCGDKASGRHYGAITCEGCKGFFKRSIRKNLVYSCRGSKDCVI 145
Query: 175 DKTQRKRCPFCRFQKCLEVGMK 196
+K R RC +CR Q+C+ GMK
Sbjct: 146 NKHHRNRCQYCRLQRCIAFGMK 167
>UNIPROTKB|F1P607 [details] [associations]
symbol:RORA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00700000104109 OMA:VAAQIEI
EMBL:AAEX03016182 Ensembl:ENSCAFT00000026445 Uniprot:F1P607
Length = 487
Score = 240 (89.5 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C +CGDK SG HYG++TCE CKGFF+R+ Q+ Y+C +++C ID+T R RC CR QK
Sbjct: 17 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQK 76
Query: 190 CLEVGM 195
CL VGM
Sbjct: 77 CLAVGM 82
>UNIPROTKB|F1RNX7 [details] [associations]
symbol:NR2F1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900
GO:GO:0000122 GO:GO:0030522 KO:K08547 OMA:DKGQGQP EMBL:CU463069
RefSeq:XP_003354261.1 Ensembl:ENSSSCT00000015465 GeneID:100621341
KEGG:ssc:100621341 Uniprot:F1RNX7
Length = 422
Score = 238 (88.8 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P +++ IE C VCGDK SG HYG TCE CK FFKR+V+ YTC A R+C ID+
Sbjct: 74 PGSGQSQQHIE--CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQ 131
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
R +C +CR +KCL+VGM+ E
Sbjct: 132 HHRNQCQYCRLKKCLKVGMRRE 153
>MGI|MGI:1352451 [details] [associations]
symbol:Nr2f1 "nuclear receptor subfamily 2, group F, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001764 "neuron migration" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISO] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IDA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0044323 "retinoic acid-responsive
element binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352451
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900
GO:GO:0000122 GO:GO:0030522 CTD:7025 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08547 ChiTaRS:NR2F1 EMBL:U07625 EMBL:X74134
IPI:IPI00119059 PIR:I48305 RefSeq:NP_034281.2 UniGene:Mm.439653
ProteinModelPortal:Q60632 SMR:Q60632 STRING:Q60632
PhosphoSite:Q60632 PaxDb:Q60632 PRIDE:Q60632 GeneID:13865
KEGG:mmu:13865 InParanoid:Q60632 NextBio:284760 CleanEx:MM_NR2F1
Genevestigator:Q60632 GermOnline:ENSMUSG00000069171 Uniprot:Q60632
Length = 422
Score = 238 (88.8 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P +++ IE C VCGDK SG HYG TCE CK FFKR+V+ YTC A R+C ID+
Sbjct: 74 PGSGQSQQHIE--CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQ 131
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
R +C +CR +KCL+VGM+ E
Sbjct: 132 HHRNQCQYCRLKKCLKVGMRRE 153
>UNIPROTKB|P10589 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0001764
GO:GO:0005654 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900 GO:GO:0000122
GO:GO:0003713 GO:GO:0006367 CTD:7025 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08547 OrthoDB:EOG4MGS7H EMBL:X16155
EMBL:X12795 EMBL:BC004154 EMBL:BC017493 IPI:IPI00021431 PIR:S02710
RefSeq:NP_005645.1 UniGene:Hs.519445 PDB:2EBL PDBsum:2EBL
ProteinModelPortal:P10589 SMR:P10589 DIP:DIP-622N STRING:P10589
PhosphoSite:P10589 DMDM:116959 PaxDb:P10589 PRIDE:P10589 DNASU:7025
Ensembl:ENST00000327111 GeneID:7025 KEGG:hsa:7025 UCSC:uc003kkj.3
GeneCards:GC05P092920 HGNC:HGNC:7975 HPA:CAB019281 MIM:132890
neXtProt:NX_P10589 PharmGKB:PA31758 InParanoid:P10589 OMA:DKGQGQP
PhylomeDB:P10589 ChEMBL:CHEMBL1961789 ChiTaRS:NR2F1
EvolutionaryTrace:P10589 GenomeRNAi:7025 NextBio:27447 Bgee:P10589
CleanEx:HS_NR2F1 Genevestigator:P10589 GermOnline:ENSG00000175745
Uniprot:P10589
Length = 423
Score = 238 (88.8 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P +++ IE C VCGDK SG HYG TCE CK FFKR+V+ YTC A R+C ID+
Sbjct: 75 PGSGQSQQHIE--CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQ 132
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
R +C +CR +KCL+VGM+ E
Sbjct: 133 HHRNQCQYCRLKKCLKVGMRRE 154
>UNIPROTKB|Q9TTR8 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AJ249440 IPI:IPI00710549
PIR:JH0786 RefSeq:NP_786998.1 UniGene:Bt.543
ProteinModelPortal:Q9TTR8 SMR:Q9TTR8 STRING:Q9TTR8 GeneID:327684
KEGG:bta:327684 CTD:7025 HOGENOM:HOG000260820 HOVERGEN:HBG005606
InParanoid:Q9TTR8 KO:K08547 OrthoDB:EOG4MGS7H NextBio:20810149
Uniprot:Q9TTR8
Length = 424
Score = 238 (88.8 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 117 PEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDK 176
P +++ IE C VCGDK SG HYG TCE CK FFKR+V+ YTC A R+C ID+
Sbjct: 76 PGSGQSQQHIE--CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQ 133
Query: 177 TQRKRCPFCRFQKCLEVGMKLE 198
R +C +CR +KCL+VGM+ E
Sbjct: 134 HHRNQCQYCRLKKCLKVGMRRE 155
>UNIPROTKB|E1C7C2 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00690000101777 OMA:ANYSEVL EMBL:AADN02024674
IPI:IPI00583810 ProteinModelPortal:E1C7C2
Ensembl:ENSGALT00000025271 Uniprot:E1C7C2
Length = 454
Score = 239 (89.2 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 122 TKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
T GI LC +CGD+ +G HYG +C+ CKGFF+R+++ VYTC R C +DK +R +
Sbjct: 51 TDSGISSLCAICGDRATGKHYGASSCDGCKGFFRRSIRKNHVYTCRFSRQCVVDKDKRNQ 110
Query: 182 CPFCRFQKCLEVGMKLE 198
C +CR +KC GMK E
Sbjct: 111 CRYCRLKKCFRAGMKKE 127
>UNIPROTKB|P13056 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0048386
"positive regulation of retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005654 GO:GO:0046872
GO:GO:0003677 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:CH471054 GO:GO:0003700 GO:GO:0000122 GO:GO:0048386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway eggNOG:NOG297520
HOVERGEN:HBG008596 KO:K08543 CTD:7181 HOGENOM:HOG000013058
OrthoDB:EOG476JZT EMBL:M21985 EMBL:M29959 EMBL:M29960 EMBL:AK291319
EMBL:AC011598 EMBL:BC040141 IPI:IPI00019051 IPI:IPI00334759
IPI:IPI00798023 PIR:A31521 PIR:A36738 PIR:B36738
RefSeq:NP_001027458.1 RefSeq:NP_001120834.1 RefSeq:NP_003288.2
UniGene:Hs.108301 UniGene:Hs.707524 ProteinModelPortal:P13056
SMR:P13056 IntAct:P13056 STRING:P13056 PhosphoSite:P13056
DMDM:226693548 PRIDE:P13056 DNASU:7181 Ensembl:ENST00000330677
Ensembl:ENST00000333003 Ensembl:ENST00000393101 GeneID:7181
KEGG:hsa:7181 UCSC:uc001tdm.4 UCSC:uc001tdn.4 UCSC:uc001tdo.4
GeneCards:GC12M095414 HGNC:HGNC:7971 HPA:CAB010395 MIM:601529
neXtProt:NX_P13056 PharmGKB:PA31754 OMA:QNSNEMS PhylomeDB:P13056
ChEMBL:CHEMBL1961787 GenomeRNAi:7181 NextBio:28152 Bgee:P13056
CleanEx:HS_NR2C1 Genevestigator:P13056 GermOnline:ENSG00000120798
Uniprot:P13056
Length = 603
Score = 242 (90.2 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 46/104 (44%), Positives = 63/104 (60%)
Query: 100 SAGISYHPFHTSTIAA------TPEHPDTKEG-IEELCPVCGDKVSGYHYGLLTCESCKG 152
+AG++ F T ++A T PD + +LC VCGDK SG HYG +TCE CKG
Sbjct: 76 AAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKASGRHYGAVTCEGCKG 135
Query: 153 FFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMK 196
FFKR+++ VY+C + C I+K R RC +CR Q+C+ GMK
Sbjct: 136 FFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMK 179
>UNIPROTKB|A0JNE3 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9913 "Bos taurus" [GO:0016605 "PML body" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 eggNOG:NOG297520 KO:K08543
EMBL:BC126643 IPI:IPI00685366 RefSeq:NP_001071372.1
UniGene:Bt.28215 ProteinModelPortal:A0JNE3 SMR:A0JNE3 STRING:A0JNE3
GeneID:511407 KEGG:bta:511407 CTD:7181 HOGENOM:HOG000013058
InParanoid:A0JNE3 OrthoDB:EOG476JZT NextBio:20869910 Uniprot:A0JNE3
Length = 608
Score = 242 (90.2 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 52/160 (32%), Positives = 79/160 (49%)
Query: 38 TGAQTPQMQHSNNDTQSSQLSPMLGNNTXXXXXXXXYNFNNMVDNSYLFQSPGGGSTN-M 96
TG + + +++TQ Q +L N+ + F +P N +
Sbjct: 25 TGQKIQIVTALDHNTQGKQF--ILTNHDGSTPNKVILARQDSTPGKVFFTTPDAAGVNQL 82
Query: 97 DLSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGDKVSGYHYGLLTCESCKGFFKR 156
++ +S T ++ E K + +LC VCGDK SG HYG +TCE CKGFFKR
Sbjct: 83 FFTTPDLSTQQLQFLTDNSSSEQGPNK--VFDLCVVCGDKASGRHYGEVTCEGCKGFFKR 140
Query: 157 TVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGMK 196
+++ VY+C + C I+K R RC +CR Q+C+ GMK
Sbjct: 141 SIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMK 180
>UNIPROTKB|Q95N78 [details] [associations]
symbol:PPARA "Peroxisome proliferator-activated receptor
alpha" species:9615 "Canis lupus familiaris" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0019217 "regulation of fatty acid metabolic process"
evidence=ISS] [GO:0008544 "epidermis development" evidence=ISS]
[GO:0006631 "fatty acid metabolic process" evidence=ISS]
[GO:0004872 "receptor activity" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0008289 "lipid binding" evidence=ISS]
[GO:0008144 "drug binding" evidence=ISS] [GO:0032099 "negative
regulation of appetite" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0072369 "regulation of lipid transport by
positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0072366 "regulation of cellular ketone
metabolic process by positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0072363 "regulation of
glycolysis by positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0070166 "enamel
mineralization" evidence=IEA] [GO:0046321 "positive regulation of
fatty acid oxidation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0031624 "ubiquitin conjugating enzyme binding"
evidence=IEA] [GO:0010891 "negative regulation of sequestering of
triglyceride" evidence=IEA] [GO:0010887 "negative regulation of
cholesterol storage" evidence=IEA] [GO:0010871 "negative regulation
of receptor biosynthetic process" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003074
InterPro:IPR003076 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01288 PRINTS:PR01289 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0008144 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0004872 GO:GO:0006631 GO:GO:0003700
GO:GO:0019217 GO:GO:0046321 GO:GO:0010887 GO:GO:0000122
GO:GO:0010891 GO:GO:0008289 GO:GO:0042060 GO:GO:0008544
GO:GO:0070166 GO:GO:0032099 eggNOG:NOG266867
GeneTree:ENSGT00700000104361 GO:GO:0072363 GO:GO:0072369
GO:GO:0010871 EMBL:AF350327 RefSeq:NP_001003093.1 UniGene:Cfa.3519
ProteinModelPortal:Q95N78 SMR:Q95N78 STRING:Q95N78
Ensembl:ENSCAFT00000001222 GeneID:403654 KEGG:cfa:403654 CTD:5465
HOGENOM:HOG000261626 HOVERGEN:HBG106004 InParanoid:Q95N78 KO:K07294
OMA:ICPLSPL OrthoDB:EOG4FFD1Q BindingDB:Q95N78 ChEMBL:CHEMBL2847
NextBio:20817159 GO:GO:0072366 Uniprot:Q95N78
Length = 468
Score = 239 (89.2 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 51/120 (42%), Positives = 63/120 (52%)
Query: 78 NMVDNSYLFQSPGG-GSTNMD-LSSAGISYHPFHTSTIAATPEHPDTKEGIEELCPVCGD 135
+ + YL PG GS D LS A H + E IE C +CGD
Sbjct: 50 SFTEYQYLGSGPGSDGSVITDTLSPAPSPSSVTHPAAPGGAEEPSSVALNIE--CRICGD 107
Query: 136 KVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQKCLEVGM 195
+ SGYHYG+ CE CKGFF+RT++ K Y +RSC I K R +C +CRF KCL VGM
Sbjct: 108 RASGYHYGVHACEGCKGFFRRTIRLKLAYD-KCDRSCKIQKKNRNKCQYCRFHKCLSVGM 166
>UNIPROTKB|Q6GZ72 [details] [associations]
symbol:NR1I3 "Constitutive androstane receptor SV18"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001628 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10
GO:GO:0003700 GO:GO:0006351 EMBL:AL590714 UniGene:Hs.349642
HGNC:HGNC:7969 HOGENOM:HOG000142425 HOVERGEN:HBG061656
EMBL:AY572822 EMBL:AY572823 IPI:IPI00434584 SMR:Q6GZ72
STRING:Q6GZ72 Ensembl:ENST00000502985 Ensembl:ENST00000511944
UCSC:uc001fzq.3 Uniprot:Q6GZ72
Length = 147
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 38/70 (54%), Positives = 48/70 (68%)
Query: 130 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRFQK 189
C VCGD+ +GYH+ LTCE CKGFF+RTV TC SC + KTQR+ CP CR QK
Sbjct: 11 CVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQK 70
Query: 190 CLEVGMKLEV 199
CL+ GM+ ++
Sbjct: 71 CLDAGMRKDI 80
>FB|FBgn0000448 [details] [associations]
symbol:Hr46 "Hormone receptor-like in 46" species:7227
"Drosophila melanogaster" [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISS;NAS;IDA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0007552 "metamorphosis" evidence=TAS] [GO:0040034
"regulation of development, heterochronic" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004887
"thyroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016319 "mushroom body development"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 EMBL:AE013599 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0007552 GO:GO:0016319 GO:GO:0040034
GO:GO:0000977 GO:GO:0004887 eggNOG:NOG324222 EMBL:M90806 PIR:A46146
RefSeq:NP_001246236.1 RefSeq:NP_788303.1 UniGene:Dm.5036
ProteinModelPortal:P31396 SMR:P31396 IntAct:P31396 STRING:P31396
PRIDE:P31396 EnsemblMetazoa:FBtr0088368 EnsemblMetazoa:FBtr0306345
GeneID:36073 KEGG:dme:Dmel_CG33183 CTD:36073 FlyBase:FBgn0000448
GeneTree:ENSGT00700000104109 InParanoid:P31396 KO:K14033
OrthoDB:EOG4HT77R GenomeRNAi:36073 NextBio:796700 Bgee:P31396
GermOnline:CG33183 Uniprot:P31396
Length = 487
Score = 223 (83.6 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 38/74 (51%), Positives = 50/74 (67%)
Query: 123 KEGIEEL-CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKR 181
K IE + C VCGDK SG HYG++TCE CKGFF+R+ + Y C + C +D+ R R
Sbjct: 43 KAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKQCVVDRVNRNR 102
Query: 182 CPFCRFQKCLEVGM 195
C +CR QKCL++GM
Sbjct: 103 CQYCRLQKCLKLGM 116
Score = 38 (18.4 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 47 HSNNDTQSSQLSPMLGNNT 65
H+NN QS+ SP NN+
Sbjct: 20 HANNLGQSNVQSPAGQNNS 38
>UNIPROTKB|B0ZBF8 [details] [associations]
symbol:NR3C2 "Mineralocorticoid receptor" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001628
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700
GO:GO:0006351 EMBL:EU326312 EMBL:FJ515829 EMBL:AC069272
EMBL:AC093678 EMBL:AC093881 EMBL:AC104691 UniGene:Hs.163924
HGNC:HGNC:7979 HOGENOM:HOG000247011 HOVERGEN:HBG006336
EMBL:AC106889 IPI:IPI00889527 SMR:B0ZBF8 STRING:B0ZBF8
Ensembl:ENST00000342437 Uniprot:B0ZBF8
Length = 706
Score = 232 (86.7 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 39/70 (55%), Positives = 48/70 (68%)
Query: 128 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCRF 187
++C VCGD+ SG HYG++TC SCK FFKR V+ + Y C C IDK +RK CP CR
Sbjct: 601 KICLVCGDEASGCHYGVVTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRL 660
Query: 188 QKCLEVGMKL 197
QKCL+ GM L
Sbjct: 661 QKCLQAGMNL 670
Score = 35 (17.4 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 94 TNMDLSSAGISYHPFHTSTIAATPEHPDTKEGIEELC 130
T+ S AGI+ T++ + P H +G C
Sbjct: 201 TSSVCSPAGINSVSSTTASFGSFPVHSPITQGTPLTC 237
>UNIPROTKB|F1NBB5 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 OMA:RMSSKDR EMBL:AADN02012104
EMBL:AADN02012105 EMBL:AADN02012106 EMBL:AADN02012107
IPI:IPI00579920 ProteinModelPortal:F1NBB5
Ensembl:ENSGALT00000016889 ArrayExpress:F1NBB5 Uniprot:F1NBB5
Length = 393
Score = 236 (88.1 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 41/72 (56%), Positives = 49/72 (68%)
Query: 127 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPFCR 186
+ LC VCGD SGYHYG+ +CE+CK FFKRT+Q Y+C A C I K +RK C CR
Sbjct: 57 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 116
Query: 187 FQKCLEVGMKLE 198
F KCL+VGM E
Sbjct: 117 FMKCLKVGMLKE 128
WARNING: HSPs involving 662 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.130 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 222 205 0.00096 111 3 11 22 0.36 33
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 912
No. of states in DFA: 600 (64 KB)
Total size of DFA: 186 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 18.53u 0.10s 18.63t Elapsed: 00:00:18
Total cpu time: 18.56u 0.10s 18.66t Elapsed: 00:00:19
Start: Thu Aug 15 13:00:00 2013 End: Thu Aug 15 13:00:19 2013
WARNINGS ISSUED: 2