Query psy12695
Match_columns 369
No_of_seqs 420 out of 4160
Neff 10.1
Searched_HMMs 29240
Date Fri Aug 16 17:17:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12695.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12695hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zyj_A Leucine-rich repeat-con 100.0 1.1E-28 3.9E-33 232.6 19.6 95 146-249 342-436 (440)
2 2xot_A Amphoterin-induced prot 100.0 8.3E-28 2.8E-32 220.7 20.3 204 29-246 6-337 (361)
3 3zyi_A Leucine-rich repeat-con 100.0 6.5E-28 2.2E-32 228.2 18.6 94 146-249 353-446 (452)
4 2ifg_A High affinity nerve gro 100.0 1.4E-28 4.9E-33 224.7 12.4 199 35-249 1-252 (347)
5 2id5_A Lingo-1, leucine rich r 99.9 8.6E-25 3E-29 208.2 17.6 84 153-245 393-476 (477)
6 2ifg_A High affinity nerve gro 99.8 3E-20 1E-24 169.5 15.5 193 47-247 33-346 (347)
7 2r9u_A Variable lymphocyte rec 99.8 3.8E-19 1.3E-23 145.6 10.2 112 31-146 2-121 (174)
8 3g39_A Variable lymphocyte rec 99.8 3.8E-19 1.3E-23 145.0 9.4 109 34-146 2-118 (170)
9 2wfh_A SLIT homolog 2 protein 99.7 2.8E-18 9.6E-23 142.8 9.0 107 33-143 2-110 (193)
10 2v9t_B SLIT homolog 2 protein 99.7 7.5E-18 2.6E-22 143.3 9.4 108 32-143 2-112 (220)
11 1w8a_A SLIT protein; signaling 99.7 4E-17 1.4E-21 135.8 8.8 106 34-143 1-110 (192)
12 2v70_A SLIT-2, SLIT homolog 2 99.7 4.1E-17 1.4E-21 138.7 8.5 108 32-143 2-113 (220)
13 3knb_B Obscurin-like protein 1 99.7 2.7E-16 9.2E-21 117.6 10.2 96 144-248 12-107 (107)
14 3knb_A Titin; IG-like, titin, 99.7 5.7E-16 2E-20 114.3 11.0 95 145-246 5-99 (100)
15 2o6r_A Variable lymphocyte rec 99.7 2.1E-16 7.2E-21 129.6 8.9 105 35-143 1-108 (177)
16 4g8a_A TOLL-like receptor 4; l 99.6 2.2E-16 7.4E-21 155.1 8.4 110 30-141 18-130 (635)
17 4ay9_X Follicle-stimulating ho 99.6 3.6E-16 1.2E-20 142.6 8.6 106 34-143 1-112 (350)
18 2o6s_A Variable lymphocyte rec 99.6 9.7E-16 3.3E-20 129.0 9.0 105 35-143 1-108 (208)
19 2cqv_A MLCK, myosin light chai 99.6 2.5E-14 8.6E-19 108.1 13.2 99 144-251 6-104 (114)
20 3qp3_A Titin; I-SET IG-like, s 99.6 2.4E-14 8.1E-19 106.1 11.2 97 142-247 5-101 (103)
21 3e6j_A Variable lymphocyte rec 99.5 1.1E-14 3.8E-19 124.5 9.3 106 34-143 12-120 (229)
22 1ozn_A Reticulon 4 receptor; N 99.5 1E-14 3.6E-19 128.9 9.4 109 34-143 1-113 (285)
23 1g1c_A Immunoglobulin-like dom 99.5 5.5E-14 1.9E-18 103.2 11.6 93 146-246 6-98 (99)
24 2xwt_C Thyrotropin receptor; s 99.5 7.3E-15 2.5E-19 126.4 7.7 107 33-143 2-113 (239)
25 2kdg_A Myotilin; immonoglobuli 99.5 5.8E-14 2E-18 103.3 11.4 95 145-247 5-99 (100)
26 1wit_A Twitchin 18TH IGSF modu 99.5 3.2E-14 1.1E-18 103.3 9.5 88 146-244 3-92 (93)
27 1u2h_A APEG-1, aortic preferen 99.5 5.9E-14 2E-18 103.1 10.8 93 146-246 6-98 (99)
28 2z80_A TOLL-like receptor 2, v 99.5 8.9E-15 3E-19 133.5 7.4 111 30-143 19-132 (353)
29 3m19_A Variable lymphocyte rec 99.5 7.8E-15 2.7E-19 127.3 6.7 108 34-143 3-115 (251)
30 2kkq_A Myotilin; unknown funct 99.5 2.3E-13 8E-18 103.1 13.1 97 145-249 15-112 (116)
31 3puc_A Titin; I-SET IG-like do 99.5 1.5E-13 5.1E-18 100.8 11.2 93 145-246 6-98 (99)
32 3irg_B Obscurin-like protein 1 99.5 9.8E-14 3.3E-18 103.5 10.1 97 142-247 10-106 (107)
33 3cx2_A Myosin-binding protein 99.5 1.1E-13 3.7E-18 103.5 10.1 94 146-245 5-107 (108)
34 3irg_A Titin; IG-like, titin, 99.5 1.8E-13 6.1E-18 100.5 11.0 94 146-246 6-99 (100)
35 2dm2_A Palladin; beta-sandwich 99.5 2.2E-13 7.4E-18 102.2 11.1 97 145-249 8-105 (110)
36 2bk8_A Connectin, M1, titin he 99.5 5.7E-13 1.9E-17 97.4 13.0 89 149-246 5-94 (97)
37 1gxe_A Myosin binding protein 99.5 1.5E-13 5.2E-18 107.4 9.3 94 152-245 25-138 (139)
38 2e7c_A Myosin-binding protein 99.5 4.4E-13 1.5E-17 101.9 11.2 94 145-248 21-117 (118)
39 2o6q_A Variable lymphocyte rec 99.5 1.3E-13 4.4E-18 120.9 8.8 105 37-143 10-117 (270)
40 1nct_A Titin; cell adhesion, g 99.5 6.1E-14 2.1E-18 104.5 5.6 92 145-245 14-105 (106)
41 3m45_A Cell adhesion molecule 99.5 8.4E-13 2.9E-17 98.3 11.8 102 145-248 6-108 (108)
42 2yuz_A Myosin-binding protein 99.4 3.6E-13 1.2E-17 99.1 9.4 91 145-248 7-97 (100)
43 2edj_A Roundabout homolog 2; K 99.4 2.8E-13 9.5E-18 99.7 8.6 92 145-247 8-99 (100)
44 2yr3_A Myosin light chain kina 99.4 1.9E-13 6.3E-18 100.4 7.6 88 145-244 11-98 (99)
45 3kvq_A Vascular endothelial gr 99.4 4.3E-13 1.5E-17 100.1 9.7 94 145-249 10-103 (108)
46 2ckn_A Basic fibroblast growth 99.4 7.6E-13 2.6E-17 96.4 10.6 86 145-244 9-94 (95)
47 2dm3_A KIAA0992 protein, palla 99.4 1.1E-13 3.7E-18 103.8 6.0 97 145-249 9-105 (110)
48 2dav_A SLOW MYBP-C, myosin-bin 99.4 3.9E-13 1.3E-17 102.4 9.1 95 146-246 8-111 (126)
49 1xku_A Decorin; proteoglycan, 99.4 2.4E-13 8.3E-18 122.7 8.9 106 30-139 20-128 (330)
50 2ft3_A Biglycan; proteoglycan, 99.4 2.3E-13 7.9E-18 123.0 8.6 105 30-138 22-129 (332)
51 3t6q_A CD180 antigen; protein- 99.4 1.9E-13 6.7E-18 133.6 8.4 107 33-141 2-111 (606)
52 2eo9_A Roundabout homolog 1; b 99.4 1.1E-12 3.6E-17 99.7 10.5 94 145-249 8-101 (118)
53 1waa_A Titin; metal binding pr 99.4 1.6E-12 5.3E-17 94.3 10.8 87 145-245 5-91 (93)
54 2edn_A Myosin-binding protein 99.4 3.8E-13 1.3E-17 101.3 7.4 95 147-247 14-117 (118)
55 1fhg_A Telokin; immunoglobulin 99.4 1.5E-12 5E-17 104.0 11.2 97 145-250 41-138 (154)
56 2z66_A Variable lymphocyte rec 99.4 2E-13 6.9E-18 121.8 6.5 102 35-141 1-107 (306)
57 2lu7_A Obscurin-like protein 1 99.4 1.3E-12 4.3E-17 92.7 8.8 81 152-246 3-83 (84)
58 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 3.9E-13 1.3E-17 130.3 8.1 95 32-129 21-118 (562)
59 1wwb_X Protein (brain derived 99.4 4.4E-12 1.5E-16 93.8 11.9 87 157-248 13-100 (103)
60 1he7_A High affinity nerve gro 99.4 3.5E-12 1.2E-16 97.0 11.4 86 158-250 13-103 (126)
61 3v47_A TOLL-like receptor 5B a 99.4 4.8E-13 1.6E-17 126.1 8.2 105 33-142 2-110 (455)
62 3caf_A Fibroblast growth facto 99.4 7.8E-13 2.7E-17 97.2 7.5 84 153-244 16-99 (100)
63 2wfh_A SLIT homolog 2 protein 99.4 9.2E-13 3.1E-17 109.3 8.3 95 46-140 32-131 (193)
64 3rbg_A Cytotoxic and regulator 99.4 4.6E-12 1.6E-16 97.1 11.7 99 149-249 5-104 (124)
65 3bfo_A Mucosa-associated lymph 99.4 2E-12 6.8E-17 93.3 8.5 82 146-245 4-86 (91)
66 1x44_A Myosin-binding protein 99.4 8.4E-12 2.9E-16 92.2 11.8 90 148-249 10-99 (103)
67 2z62_A TOLL-like receptor 4, v 99.4 1.3E-12 4.4E-17 114.8 8.5 104 38-143 2-108 (276)
68 1p9a_G Platelet glycoprotein I 99.4 1.4E-12 4.8E-17 115.5 8.5 106 38-143 3-132 (290)
69 2e6p_A Obscurin-like protein 1 99.3 7.3E-12 2.5E-16 92.7 10.4 90 145-248 7-99 (104)
70 2edf_A Obscurin; beta-sandwich 99.3 5.3E-12 1.8E-16 93.3 9.3 91 145-249 8-98 (103)
71 2cr3_A Basic fibroblast growth 99.3 6.2E-12 2.1E-16 92.2 9.6 85 151-249 9-93 (99)
72 2k1m_A Myosin-binding protein 99.3 1.7E-11 5.7E-16 89.2 11.7 86 146-245 9-94 (95)
73 2lvc_A Obscurin-like protein 1 99.3 3.3E-12 1.1E-16 92.0 7.8 76 147-232 6-83 (91)
74 2z80_A TOLL-like receptor 2, v 99.3 1.5E-12 5.1E-17 118.7 6.8 134 10-143 3-157 (353)
75 3vq2_A TLR4, TOLL-like recepto 99.3 2.2E-12 7.6E-17 126.1 8.3 101 39-141 7-110 (606)
76 2yuv_A Myosin-binding protein 99.3 1.9E-11 6.6E-16 89.7 11.2 90 145-248 7-97 (100)
77 3rfe_A Platelet glycoprotein I 99.3 2.3E-12 7.8E-17 99.3 6.1 62 34-99 1-67 (130)
78 2eny_A Obscurin; beta-sandwich 99.3 9.7E-12 3.3E-16 92.1 9.2 91 146-249 9-100 (104)
79 1gl4_B Basement membrane-speci 99.3 8.4E-12 2.9E-16 91.3 8.7 81 151-245 16-97 (98)
80 2z63_A TOLL-like receptor 4, v 99.3 4.3E-12 1.5E-16 123.1 8.9 102 38-141 2-106 (570)
81 3so5_A LIG-3, leucine-rich rep 99.3 1.7E-11 5.7E-16 91.6 9.9 96 145-244 10-111 (112)
82 3s35_X Vascular endothelial gr 99.3 2E-11 6.7E-16 93.2 10.3 97 152-250 15-114 (122)
83 2dku_A KIAA1556 protein; beta- 99.3 4.4E-11 1.5E-15 88.2 11.4 92 144-249 7-98 (103)
84 2z81_A CD282 antigen, TOLL-lik 99.3 3.4E-12 1.2E-16 123.2 6.6 94 50-143 10-106 (549)
85 3rbs_A Myomesin-1; immunoglobu 99.3 1.8E-11 6.2E-16 102.7 10.0 80 154-244 125-205 (207)
86 2e7b_A Obscurin; IG-like domai 99.3 1.9E-11 6.5E-16 90.2 9.0 92 144-249 7-98 (103)
87 2dlt_A Myosin binding protein 99.3 5E-12 1.7E-16 94.0 5.8 89 145-245 8-96 (106)
88 2edh_A Obscurin; structural ge 99.3 6.9E-11 2.4E-15 88.8 12.2 89 146-249 20-108 (113)
89 1wwc_A Protein (NT-3 growth fa 99.3 7.1E-11 2.4E-15 89.5 12.2 82 161-249 21-104 (118)
90 1z9m_A GAPA225; nectin-like, I 99.3 6.9E-11 2.4E-15 93.1 12.5 98 149-248 42-140 (145)
91 4hwu_A Fibroblast growth facto 99.3 2.1E-11 7.1E-16 88.6 8.5 83 151-248 7-89 (95)
92 2v9t_B SLIT homolog 2 protein 99.3 1.2E-11 4E-16 104.9 8.1 98 46-143 33-136 (220)
93 2ens_A Advanced glycosylation 99.2 5.4E-12 1.8E-16 92.0 5.2 82 146-245 11-94 (96)
94 2cry_A KIN of IRRE-like protei 99.2 2.4E-12 8.1E-17 98.4 3.4 97 144-248 13-115 (122)
95 2dm7_A KIAA1556 protein; beta- 99.2 6.5E-11 2.2E-15 88.1 11.3 92 144-250 7-98 (108)
96 1pd6_A Cardiac MYBP-C;, myosin 99.2 5.6E-11 1.9E-15 87.9 10.6 88 145-245 15-103 (104)
97 1w8a_A SLIT protein; signaling 99.2 1.6E-11 5.5E-16 101.7 8.4 95 46-140 30-131 (192)
98 2edk_A Myosin-binding protein 99.2 3.3E-12 1.1E-16 94.0 3.8 92 146-247 9-100 (101)
99 2j8h_A Titin, connectin; cardi 99.2 4.6E-11 1.6E-15 98.9 11.0 85 152-245 111-196 (197)
100 2cr6_A KIAA1556 protein, obscu 99.2 2.2E-11 7.4E-16 92.0 8.2 95 147-254 15-110 (115)
101 2rik_A Titin; I-SET IG fold, p 99.2 1.2E-10 4E-15 102.3 13.7 92 145-245 192-283 (284)
102 1ziw_A TOLL-like receptor 3; i 99.2 8.2E-12 2.8E-16 123.8 6.8 97 39-139 2-101 (680)
103 2cpc_A KIAA0657 protein; immun 99.2 9.9E-11 3.4E-15 87.9 11.1 83 155-251 23-105 (113)
104 2v9t_A Roundabout homolog 1; s 99.2 1.5E-11 5.1E-16 93.1 6.5 96 145-247 9-110 (117)
105 3qr2_A Basigin; CD147, EMMPRIN 99.2 5E-11 1.7E-15 92.9 9.1 97 140-236 16-116 (137)
106 2r15_A Myomesin-1; sarcomeric 99.2 1.6E-10 5.5E-15 96.6 12.5 88 151-247 123-211 (212)
107 2v70_A SLIT-2, SLIT homolog 2 99.2 4E-11 1.4E-15 101.6 8.7 97 47-143 34-137 (220)
108 2j8h_A Titin, connectin; cardi 99.2 1.4E-10 4.8E-15 95.9 11.9 97 145-249 4-101 (197)
109 3j0a_A TOLL-like receptor 5; m 99.2 2.6E-11 8.8E-16 123.1 8.9 94 39-137 2-99 (844)
110 2rik_A Titin; I-SET IG fold, p 99.2 2E-10 6.9E-15 100.8 13.5 98 145-251 5-102 (284)
111 2e6q_A Obscurin-like protein 1 99.2 2.4E-10 8.2E-15 85.3 11.8 99 146-249 9-108 (112)
112 3mtr_A N-CAM-1, NCAM-1, neural 99.2 1.1E-10 3.9E-15 98.1 11.2 96 146-249 20-115 (215)
113 2wv3_A Neuroplastin; igcam, me 99.2 2.8E-10 9.5E-15 93.7 13.1 95 145-245 92-189 (190)
114 3b5h_A Cervical EMMPRIN, HAB18 99.2 3.3E-10 1.1E-14 92.7 13.2 97 144-246 82-183 (184)
115 3lcy_A Titin; A-BAND, IG tande 99.2 1.3E-10 4.5E-15 95.9 10.8 97 145-250 7-103 (197)
116 2a38_A Titin; Z1Z2, structural 99.2 1.1E-10 3.8E-15 96.2 10.1 95 145-246 5-99 (194)
117 2a38_A Titin; Z1Z2, structural 99.2 1.3E-10 4.5E-15 95.8 10.5 90 146-244 104-193 (194)
118 2yd1_A Tyrosine-protein phosph 99.2 3.4E-10 1.2E-14 95.0 13.1 96 145-248 6-104 (212)
119 2yd6_A PTPRD protein; hydrolas 99.2 2.6E-10 8.9E-15 95.7 12.2 95 145-247 6-101 (212)
120 3b43_A Titin; I-SET IG fold, e 99.2 1.9E-10 6.3E-15 111.6 12.9 100 145-253 384-483 (570)
121 2o6r_A Variable lymphocyte rec 99.2 7.8E-11 2.7E-15 96.2 8.6 96 46-141 29-130 (177)
122 4g8a_A TOLL-like receptor 4; l 99.2 3.3E-11 1.1E-15 118.1 7.4 97 46-142 53-155 (635)
123 1jhl_L IGG1-kappa D11.15 FV (l 99.2 2.5E-10 8.4E-15 85.0 10.4 84 150-233 6-94 (108)
124 1p9a_G Platelet glycoprotein I 99.1 6.2E-11 2.1E-15 104.8 8.0 91 48-138 58-151 (290)
125 2c5d_C AXL oncogene, tyrosine- 99.1 2.9E-10 9.8E-15 94.0 11.6 100 146-252 3-111 (195)
126 3kld_A Contactin 4, axcam, BIG 99.1 9.2E-11 3.1E-15 108.0 8.4 88 146-246 296-383 (384)
127 4fa8_A Secreted protein BARF1; 99.1 2.4E-11 8.1E-16 101.6 4.0 85 150-239 111-195 (203)
128 2yd6_A PTPRD protein; hydrolas 99.1 4.2E-10 1.4E-14 94.4 11.4 97 146-248 109-206 (212)
129 4fa8_A Secreted protein BARF1; 99.1 1.7E-10 6E-15 96.3 8.8 96 154-249 2-108 (203)
130 2iep_A Muscle-specific kinase 99.1 1.8E-10 6.2E-15 94.8 8.5 90 146-247 101-191 (192)
131 3m19_A Variable lymphocyte rec 99.1 1.6E-10 5.6E-15 99.9 8.6 97 47-143 61-163 (251)
132 2jll_A NCAM2, neural cell adhe 99.1 6.2E-10 2.1E-14 102.3 13.0 101 146-251 2-104 (389)
133 1eaj_A Coxsackie virus and ade 99.1 2.2E-10 7.6E-15 87.3 8.4 105 142-246 2-125 (126)
134 3g39_A Variable lymphocyte rec 99.1 1.4E-10 4.6E-15 94.1 7.4 83 46-128 31-119 (170)
135 2nzi_A Titin; IG-domain, FNIII 99.1 4.7E-10 1.6E-14 99.5 11.6 96 145-248 4-100 (305)
136 2o6s_A Variable lymphocyte rec 99.1 1.9E-10 6.5E-15 96.4 8.2 97 47-143 30-132 (208)
137 2v44_A NCAM2, neural cell adhe 99.1 4.6E-10 1.6E-14 92.1 10.4 90 145-244 96-185 (189)
138 2z7x_B TOLL-like receptor 1, v 99.1 9.6E-11 3.3E-15 112.3 7.2 82 48-129 3-87 (520)
139 2eo1_A OBSCN protein, cDNA FLJ 99.1 5.7E-10 1.9E-14 82.0 9.7 81 153-247 19-99 (102)
140 2r9u_A Variable lymphocyte rec 99.1 1.8E-10 6.2E-15 93.7 7.4 83 46-128 34-122 (174)
141 2y25_A Myomesin; structural pr 99.1 7.8E-10 2.7E-14 98.5 12.0 87 152-247 229-316 (317)
142 1rhf_A Tyrosine-protein kinase 99.1 6.1E-10 2.1E-14 90.8 10.4 99 146-253 3-104 (182)
143 1epf_A NCAM, protein (neural c 99.1 1.4E-09 4.9E-14 89.3 12.7 97 147-251 4-104 (191)
144 4fqp_A Poliovirus receptor; im 99.1 3.5E-10 1.2E-14 100.9 9.5 83 153-250 225-308 (313)
145 3s97_C Contactin-1; carbonic a 99.1 4.5E-10 1.5E-14 92.9 9.0 86 147-245 115-200 (201)
146 3e6j_A Variable lymphocyte rec 99.1 3.6E-10 1.2E-14 96.3 8.4 95 47-142 42-142 (229)
147 2v44_A NCAM2, neural cell adhe 99.1 1.4E-09 4.8E-14 89.2 11.6 96 149-254 6-103 (189)
148 2e27_L Anti-ciguatoxin antibod 99.1 9.8E-10 3.4E-14 83.3 9.8 85 148-232 6-95 (119)
149 2iep_A Muscle-specific kinase 99.1 5.8E-10 2E-14 91.6 9.2 96 145-250 7-103 (192)
150 2q20_A VK1 O18/O8 germline lig 99.0 7.4E-10 2.5E-14 82.6 8.9 85 148-232 6-95 (109)
151 2ny1_B T-cell surface glycopro 99.0 8.9E-10 3E-14 90.1 10.2 78 152-248 104-181 (184)
152 3b43_A Titin; I-SET IG fold, e 99.0 6.2E-10 2.1E-14 107.9 10.7 93 145-245 477-569 (570)
153 2yd1_A Tyrosine-protein phosph 99.0 4.1E-10 1.4E-14 94.4 8.2 92 146-249 111-203 (212)
154 1qfw_M FV, antibody (anti beta 99.0 9E-10 3.1E-14 82.0 9.2 84 150-233 6-94 (108)
155 3lcy_A Titin; A-BAND, IG tande 99.0 1.4E-09 4.8E-14 89.6 11.2 86 152-246 110-196 (197)
156 2va4_A NCAM2, N-CAM 2, neural 99.0 1.2E-09 4.2E-14 89.6 10.8 86 153-249 12-97 (192)
157 1pko_A Myelin oligodendrocyte 99.0 4.7E-09 1.6E-13 81.8 13.5 98 151-248 12-123 (139)
158 3jz7_A MCAR, CAR, coxsackievir 99.0 3.3E-10 1.1E-14 94.7 7.2 83 153-246 129-212 (214)
159 2wim_A N-CAM 2, NCAM2, neural 99.0 1.1E-09 3.8E-14 96.2 11.0 85 154-249 203-287 (291)
160 3uto_A Twitchin; kinase, muscl 99.0 1.4E-09 4.8E-14 105.1 12.5 92 145-245 482-573 (573)
161 3mj8_L Stimulatory hamster ant 99.0 2.5E-09 8.6E-14 89.5 12.7 99 147-246 3-109 (213)
162 2yd9_A Receptor-type tyrosine- 99.0 9.2E-10 3.1E-14 97.7 10.5 93 145-247 6-101 (304)
163 1mqk_L Antibody 7E2 FV fragmen 99.0 9.1E-10 3.1E-14 83.6 8.9 97 150-246 6-109 (120)
164 2v9r_A Roundabout homolog 1; p 99.0 6.6E-10 2.3E-14 92.8 8.9 93 147-251 113-207 (212)
165 2wv3_A Neuroplastin; igcam, me 99.0 1.1E-09 3.9E-14 89.9 10.2 90 146-251 4-96 (190)
166 2o26_X MAST/stem cell growth f 99.0 6.4E-10 2.2E-14 97.9 9.2 100 145-247 188-289 (290)
167 1a9n_A U2A', U2A'; complex (nu 99.0 2.6E-10 8.9E-15 93.0 6.1 97 47-143 21-121 (176)
168 2c5d_C AXL oncogene, tyrosine- 99.0 1.3E-09 4.6E-14 89.9 10.6 84 145-244 106-191 (195)
169 3mjg_X Beta-type platelet-deri 99.0 1.3E-09 4.6E-14 95.7 11.2 98 147-249 183-281 (289)
170 3laf_A Deleted in colorectal c 99.0 5.6E-10 1.9E-14 103.0 9.1 90 146-247 313-402 (403)
171 1i8k_A Epidermal growth factor 99.0 1.3E-09 4.3E-14 81.0 9.3 84 150-233 6-94 (107)
172 2v5t_A NCAM2, N-CAM 2, neural 99.0 1.2E-09 4E-14 89.5 9.8 82 154-246 107-188 (189)
173 3p3y_A Neurofascin; IG domains 99.0 1.1E-09 3.9E-14 100.9 10.7 91 146-246 313-403 (404)
174 1vca_A VCAM-D1,2, human vascul 99.0 1.6E-09 5.4E-14 90.4 10.3 83 155-249 11-93 (202)
175 2v5m_A Dscam; neurobiology SPL 99.0 5.2E-10 1.8E-14 102.7 8.1 76 150-244 312-387 (388)
176 2va4_A NCAM2, N-CAM 2, neural 99.0 3.9E-09 1.3E-13 86.6 12.5 88 153-244 102-191 (192)
177 2vr9_A Roundabout 1, ROBO; imm 99.0 1.8E-09 6.2E-14 90.6 10.5 97 146-246 109-206 (217)
178 3nl4_L Antigen binding fragmen 99.0 1.6E-09 5.5E-14 90.7 10.1 100 147-246 3-110 (213)
179 2o6q_A Variable lymphocyte rec 99.0 7.7E-10 2.6E-14 96.7 8.3 97 47-143 39-141 (270)
180 1epf_A NCAM, protein (neural c 99.0 1.2E-09 4E-14 89.8 8.9 89 146-244 101-189 (191)
181 3khq_A B-cell antigen receptor 99.0 1.1E-09 3.9E-14 84.7 8.0 95 147-248 19-119 (133)
182 2x1w_L Vascular endothelial gr 99.0 2.1E-09 7E-14 90.3 10.3 93 153-248 113-209 (213)
183 2nzi_A Titin; IG-domain, FNIII 99.0 3.1E-09 1.1E-13 94.1 11.9 89 152-249 111-200 (305)
184 1zox_A CLM-1; IG-superfamily, 99.0 3E-09 1E-13 79.7 10.0 98 151-248 7-112 (113)
185 1i3g_L Antibody FV fragment; a 99.0 1.9E-09 6.6E-14 80.6 8.9 87 147-233 6-97 (111)
186 3ojm_B Fibroblast growth facto 99.0 1.1E-09 3.8E-14 92.6 8.1 88 153-248 27-114 (231)
187 1qz1_A Neural cell adhesion mo 99.0 1.7E-09 5.9E-14 95.0 9.5 86 154-246 205-290 (291)
188 4ffy_L DENV1-E111 single chain 99.0 2.9E-09 1E-13 81.5 9.6 100 148-247 4-113 (126)
189 3ejj_X Macrophage colony-stimu 99.0 2.7E-09 9.4E-14 93.6 10.5 97 146-249 187-284 (289)
190 1cs6_A Axonin-1; neural cell a 99.0 1.3E-09 4.5E-14 99.8 8.7 87 146-245 295-381 (382)
191 3grw_A Fibroblast growth facto 99.0 1.7E-09 5.9E-14 92.3 8.9 97 152-249 121-221 (241)
192 2yc1_B Single chain antibody f 99.0 3.6E-09 1.2E-13 83.0 9.9 103 146-248 17-125 (146)
193 1qz1_A Neural cell adhesion mo 99.0 6.4E-09 2.2E-13 91.3 12.7 101 146-254 3-107 (291)
194 2xot_A Amphoterin-induced prot 99.0 8.6E-10 2.9E-14 100.7 7.2 58 85-142 62-119 (361)
195 4gos_A V-SET domain-containing 99.0 1.7E-09 5.7E-14 82.8 7.7 96 150-245 10-119 (125)
196 3k0w_A Mucosa-associated lymph 98.9 1.4E-09 4.9E-14 91.6 7.9 84 146-247 119-203 (218)
197 3rfs_A Internalin B, repeat mo 98.9 1.4E-09 4.7E-14 95.2 8.0 96 47-143 65-165 (272)
198 3bp6_B Programmed cell death 1 98.9 4.2E-09 1.4E-13 87.4 10.6 91 150-248 7-105 (202)
199 3rfs_A Internalin B, repeat mo 98.9 1.8E-09 6.1E-14 94.5 8.6 97 47-143 87-189 (272)
200 3sgj_C Human FCG3A receptor; r 98.9 1.5E-09 5.2E-14 90.6 7.7 79 154-249 97-177 (204)
201 2vr9_A Roundabout 1, ROBO; imm 98.9 2.2E-09 7.4E-14 90.2 8.5 98 145-247 9-107 (217)
202 1f97_A Junction adhesion molec 98.9 1.9E-09 6.5E-14 89.9 8.0 100 145-246 104-207 (212)
203 1rhf_A Tyrosine-protein kinase 98.9 4.3E-09 1.5E-13 85.7 9.8 82 145-244 98-181 (182)
204 1fnl_A Low affinity immunoglob 98.9 2.8E-09 9.4E-14 86.5 8.6 77 153-246 96-174 (175)
205 3kld_A Contactin 4, axcam, BIG 98.9 3.5E-09 1.2E-13 97.3 10.2 90 152-253 212-301 (384)
206 2jll_A NCAM2, neural cell adhe 98.9 5.8E-09 2E-13 95.7 11.5 97 145-248 100-196 (389)
207 1f97_A Junction adhesion molec 98.9 4.6E-09 1.6E-13 87.5 9.9 100 148-251 4-108 (212)
208 3k0w_A Mucosa-associated lymph 98.9 2.8E-09 9.6E-14 89.8 8.6 87 144-248 17-104 (218)
209 3udw_C Poliovirus receptor; PV 98.9 7.4E-09 2.5E-13 77.9 10.1 97 152-248 7-118 (118)
210 2wim_A N-CAM 2, NCAM2, neural 98.9 7.6E-09 2.6E-13 90.9 11.7 103 145-257 4-108 (291)
211 1f2q_A High affinity immunoglo 98.9 1.8E-09 6.3E-14 87.6 7.2 79 153-248 93-173 (176)
212 3r06_A Anti-mouse CD3epsilon a 98.9 4.2E-09 1.4E-13 88.1 9.5 98 147-244 3-106 (213)
213 3q0h_A T cell immunoreceptor w 98.9 7.7E-09 2.6E-13 78.0 10.0 96 151-249 9-111 (117)
214 3grw_A Fibroblast growth facto 98.9 4.5E-09 1.5E-13 89.7 9.8 88 152-247 22-109 (241)
215 1eeq_A Kappa-4 immunoglobulin 98.9 6E-09 2.1E-13 78.2 9.3 84 150-233 6-100 (114)
216 2yd9_A Receptor-type tyrosine- 98.9 3.3E-09 1.1E-13 94.0 9.1 88 147-249 207-294 (304)
217 3rrq_A Protein PD-1, programme 98.9 3.3E-09 1.1E-13 81.6 7.8 99 150-248 6-117 (129)
218 1bih_A Hemolin; insect immunit 98.9 2.9E-09 1E-13 97.9 8.8 85 146-244 309-394 (395)
219 2v5t_A NCAM2, N-CAM 2, neural 98.9 5.4E-09 1.9E-13 85.5 9.4 93 146-248 3-97 (189)
220 3ojm_B Fibroblast growth facto 98.9 4.1E-09 1.4E-13 89.1 9.0 92 152-249 125-224 (231)
221 1j05_L T84.66 antibody, anti-C 98.9 4.3E-09 1.5E-13 78.6 8.0 83 150-232 6-97 (111)
222 3rbs_A Myomesin-1; immunoglobu 98.9 5.6E-09 1.9E-13 87.4 9.6 80 152-242 9-91 (207)
223 2ell_A Acidic leucine-rich nuc 98.9 1.8E-09 6.2E-14 87.1 6.3 93 47-139 26-124 (168)
224 1ry7_B FGFR-3, fibroblast grow 98.9 2.7E-09 9.1E-14 95.9 8.0 98 152-249 229-330 (334)
225 2ell_A Acidic leucine-rich nuc 98.9 1.4E-09 5E-14 87.7 5.6 96 47-143 51-155 (168)
226 1dce_A Protein (RAB geranylger 98.9 1.8E-09 6.3E-14 104.1 7.2 94 47-143 443-541 (567)
227 3p2t_A Leukocyte immunoglobuli 98.9 3.4E-09 1.2E-13 87.7 7.8 89 146-246 6-96 (196)
228 2xwt_C Thyrotropin receptor; s 98.9 1.9E-09 6.6E-14 92.3 6.5 91 46-138 32-130 (239)
229 4fom_A Poliovirus receptor-rel 98.9 1.5E-09 5E-14 96.5 6.0 83 153-249 220-303 (308)
230 3s96_B 3B5H10 FAB light chain; 98.9 9.5E-09 3.2E-13 86.2 10.6 99 147-246 3-116 (218)
231 1xku_A Decorin; proteoglycan, 98.9 3.2E-09 1.1E-13 95.5 8.1 97 46-143 172-271 (330)
232 2y23_A Myomesin; structural pr 98.9 5.1E-09 1.8E-13 92.9 9.2 79 155-244 231-310 (312)
233 2je0_A Acidic leucine-rich nuc 98.9 1.1E-09 3.9E-14 86.4 4.4 92 48-139 20-117 (149)
234 1itb_B Type 1 interleukin-1 re 98.9 6.7E-09 2.3E-13 92.5 9.9 97 146-245 209-313 (315)
235 3qs7_E FL cytokine receptor; i 98.9 8.5E-09 2.9E-13 96.1 10.9 100 139-248 37-141 (423)
236 1gsm_A Madcam-1, mucosal addre 98.9 1.1E-08 3.6E-13 85.3 10.3 82 154-250 16-99 (210)
237 1dlf_L Anti-dansyl immunoglobu 98.9 1.3E-08 4.6E-13 76.1 9.9 84 150-233 6-99 (113)
238 2z62_A TOLL-like receptor 4, v 98.9 3.4E-09 1.2E-13 92.8 7.7 98 46-143 29-132 (276)
239 3u6r_L Antibody 1:7 (light cha 98.9 1E-08 3.5E-13 80.2 9.5 97 150-246 5-106 (143)
240 4f80_A Butyrophilin subfamily 98.9 1.5E-08 5E-13 85.7 11.2 96 152-247 11-120 (226)
241 2or8_A Hepatitis A virus cellu 98.9 7.5E-09 2.6E-13 77.8 8.3 95 152-246 4-111 (116)
242 3esu_F Antibody 14B7* light ch 98.9 1.1E-08 3.6E-13 88.0 10.3 100 147-246 6-111 (250)
243 1a9n_A U2A', U2A'; complex (nu 98.9 1.7E-09 5.8E-14 88.0 5.0 97 46-143 43-148 (176)
244 4frw_A Poliovirus receptor-rel 98.9 5.1E-09 1.7E-13 87.4 8.0 86 152-245 125-210 (218)
245 1neu_A Myelin P0 protein; stru 98.9 5.8E-09 2E-13 79.4 7.7 99 151-249 5-122 (124)
246 3g06_A SSPH2 (leucine-rich rep 98.9 6.7E-10 2.3E-14 108.1 2.9 97 33-136 29-125 (622)
247 3tv3_L PGT128 light chain, IG 98.9 2.1E-08 7.2E-13 83.7 11.6 95 148-245 4-105 (211)
248 1lk3_L 9D7 light chain; antige 98.9 1.3E-08 4.4E-13 85.0 10.3 95 152-246 7-107 (210)
249 2je0_A Acidic leucine-rich nuc 98.9 1.6E-09 5.6E-14 85.5 4.5 95 46-141 43-146 (149)
250 3r08_E T-cell surface glycopro 98.9 1.4E-09 4.7E-14 75.8 3.5 61 151-231 5-66 (82)
251 1nbq_A JAM, junctional adhesio 98.8 1.3E-09 4.5E-14 90.7 4.0 98 145-244 107-207 (209)
252 1xau_A B- and T-lymphocyte att 98.8 1E-08 3.5E-13 73.6 7.8 92 152-246 21-116 (122)
253 3ry4_A Low affinity immunoglob 98.8 6.9E-09 2.4E-13 83.5 8.0 75 153-244 93-169 (170)
254 1h5b_A Murine T cell receptor 98.8 9.3E-09 3.2E-13 77.0 8.1 82 150-234 6-95 (113)
255 2znx_A SCFV; fluorotryptohpan, 98.8 1.3E-08 4.4E-13 87.2 10.1 101 148-248 4-110 (242)
256 3d9a_L Light chain of hyhel10 98.8 1.1E-08 3.8E-13 85.5 9.5 97 150-246 6-108 (213)
257 1ozn_A Reticulon 4 receptor; N 98.8 5.7E-09 1.9E-13 91.8 7.9 98 46-143 33-137 (285)
258 3umt_A SCFV heavy chain and li 98.8 1.2E-08 4E-13 88.2 9.8 105 145-249 138-248 (256)
259 3o6n_A APL1; leucine-rich repe 98.8 2.5E-09 8.7E-14 98.5 5.8 96 47-142 47-148 (390)
260 3t0v_A Immunoglobulin variable 98.8 3.9E-08 1.3E-12 74.8 11.4 86 147-233 3-95 (123)
261 1pew_A JTO2, A lambda-6 type i 98.8 2.2E-08 7.6E-13 74.4 9.9 82 152-233 7-95 (109)
262 4f80_A Butyrophilin subfamily 98.8 4.6E-09 1.6E-13 88.9 6.8 89 151-247 124-214 (226)
263 2ft3_A Biglycan; proteoglycan, 98.8 1.7E-09 5.7E-14 97.5 4.3 96 47-143 174-272 (332)
264 3auv_A SC-DSFV derived from th 98.8 7.4E-09 2.5E-13 90.6 8.3 102 146-247 13-120 (276)
265 3sob_L Antibody light chain; b 98.8 1.8E-08 6.1E-13 85.6 10.5 100 147-246 26-131 (237)
266 1hng_A CD2; T lymphocyte adhes 98.8 1.2E-08 4.1E-13 83.0 8.9 91 154-247 5-100 (176)
267 3sgj_C Human FCG3A receptor; r 98.8 4.3E-09 1.5E-13 87.9 6.2 83 146-249 8-91 (204)
268 1ccz_A Protein (CD58); LFA-3, 98.8 4.1E-09 1.4E-13 85.4 5.9 90 154-248 4-96 (171)
269 3v47_A TOLL-like receptor 5B a 98.8 8E-09 2.7E-13 97.1 8.6 96 47-142 277-378 (455)
270 3omz_A Human vdelta1 gamma del 98.8 3.6E-09 1.2E-13 91.6 5.8 102 146-247 3-119 (259)
271 3p3y_A Neurofascin; IG domains 98.8 1.4E-08 4.7E-13 93.6 10.0 89 154-254 231-319 (404)
272 1moe_A Anti-CEA MAB T84.66; an 98.8 1E-08 3.5E-13 87.5 8.5 99 149-247 5-113 (240)
273 3r4d_A CEA-related cell adhesi 98.8 7.1E-09 2.4E-13 86.3 7.2 80 157-248 122-202 (208)
274 1oaq_L Light chain; antibody, 98.8 3E-08 1E-12 75.1 10.0 95 153-247 8-111 (120)
275 3a79_B TLR6, VLRB.59, TOLL-lik 98.8 6.6E-09 2.3E-13 100.5 7.9 95 46-143 53-154 (562)
276 2v9r_A Roundabout homolog 1; p 98.8 5.4E-09 1.8E-13 87.2 6.3 101 145-249 9-112 (212)
277 1nbq_A JAM, junctional adhesio 98.8 9E-09 3.1E-13 85.5 7.6 103 147-253 6-113 (209)
278 3o6n_A APL1; leucine-rich repe 98.8 7.9E-09 2.7E-13 95.2 7.9 96 47-142 71-172 (390)
279 2p1y_A Bispecific alpha/beta T 98.8 1.2E-08 4E-13 87.1 8.4 87 147-233 129-222 (238)
280 2if7_A SLAM family member 6; N 98.8 1.4E-08 4.7E-13 83.9 8.6 95 151-248 4-108 (193)
281 1fnl_A Low affinity immunoglob 98.8 6.7E-09 2.3E-13 84.2 6.5 81 146-247 8-89 (175)
282 3qs9_E FL cytokine receptor; i 98.8 1.1E-08 3.7E-13 98.1 9.0 84 154-250 335-418 (527)
283 1e07_A Carcinoembryonic antige 98.8 1.7E-08 5.8E-13 99.2 10.6 76 151-246 565-640 (642)
284 4ezg_A Putative uncharacterize 98.8 8.9E-09 3E-13 85.4 7.3 97 46-143 45-144 (197)
285 2oyp_A Hepatitis A virus cellu 98.8 1.5E-08 5.1E-13 75.1 7.8 92 154-245 3-107 (109)
286 4hwn_A FC receptor-like A; FCR 98.8 8.1E-09 2.8E-13 76.7 6.2 75 155-246 17-99 (108)
287 2oz4_A Intercellular adhesion 98.8 5.8E-09 2E-13 90.6 6.2 73 152-246 192-264 (265)
288 3ux9_B SCFV antibody; five hel 98.8 3.7E-08 1.3E-12 85.0 11.2 98 151-248 8-115 (256)
289 3u83_A Poliovirus receptor-rel 98.8 8.5E-09 2.9E-13 92.4 7.3 83 152-249 239-323 (331)
290 4b8c_D Glucose-repressible alc 98.8 3.9E-09 1.3E-13 105.0 5.5 93 47-141 226-322 (727)
291 3zyi_A Leucine-rich repeat-con 98.8 8.3E-09 2.8E-13 97.0 7.5 112 29-142 40-154 (452)
292 3bp6_B Programmed cell death 1 98.8 9.9E-09 3.4E-13 85.1 7.1 81 156-247 114-194 (202)
293 1bih_A Hemolin; insect immunit 98.8 1.5E-08 5.1E-13 93.1 9.0 96 152-254 219-315 (395)
294 3jz7_A MCAR, CAR, coxsackievir 98.8 2.6E-08 8.9E-13 82.9 9.6 100 151-250 6-124 (214)
295 4i0k_A CD276 antigen; immunogl 98.8 2.6E-08 8.7E-13 83.8 9.6 88 154-249 119-209 (222)
296 2d3v_A Leukocyte immunoglobuli 98.8 1.2E-08 4.1E-13 84.3 7.4 89 146-246 6-96 (196)
297 2gi7_A GPVI protein; IG-like d 98.8 9.8E-09 3.3E-13 84.0 6.8 80 146-246 9-90 (184)
298 3oja_B Anopheles plasmodium-re 98.8 5E-09 1.7E-13 102.1 5.9 95 47-141 53-153 (597)
299 4gjt_B Poliovirus receptor-rel 98.8 3E-08 1E-12 75.5 9.0 97 151-247 6-118 (123)
300 1f3r_B FV antibody fragment; I 98.8 1.2E-08 4.1E-13 88.3 7.7 99 148-246 142-245 (257)
301 2qsq_A Carcinoembryonic antige 98.8 1.9E-08 6.7E-13 74.9 7.8 90 154-246 9-109 (111)
302 2vsd_A CHIR AB1; immune system 98.8 1.7E-08 6E-13 74.5 7.4 74 146-233 6-79 (105)
303 2q87_A CMRF35-H antigen; all-b 98.8 1.4E-08 4.7E-13 75.7 6.9 81 152-233 3-91 (110)
304 2fbo_J V1V2;, variable region- 98.8 7.6E-09 2.6E-13 88.7 6.3 89 152-243 143-249 (250)
305 1svz_A Immunoglobulin;, single 98.8 2.5E-08 8.4E-13 85.6 9.5 99 149-247 5-114 (247)
306 3sbw_C Programmed cell death 1 98.8 6.1E-08 2.1E-12 81.4 11.8 99 150-249 6-118 (222)
307 3zyj_A Leucine-rich repeat-con 98.8 9.8E-09 3.4E-13 96.2 7.5 71 67-137 208-281 (440)
308 2ghw_B Anti-SARS SCFV antibody 98.8 3.3E-08 1.1E-12 84.8 10.2 98 148-245 138-241 (247)
309 3laf_A Deleted in colorectal c 98.8 1.7E-08 5.7E-13 93.0 8.9 92 152-254 228-319 (403)
310 2nms_A CMRF35-like-molecule 1; 98.8 1.6E-07 5.4E-12 71.5 12.9 99 151-249 8-114 (124)
311 3vq2_A TLR4, TOLL-like recepto 98.8 1.1E-08 3.6E-13 100.0 7.8 96 46-141 33-134 (606)
312 2z81_A CD282 antigen, TOLL-lik 98.8 1.4E-08 4.6E-13 97.9 8.5 94 46-142 411-504 (549)
313 2ocw_A Polymeric-immunoglobuli 98.8 2.8E-08 9.7E-13 96.3 10.8 109 150-258 5-123 (585)
314 2ywz_A NEW antigen receptor va 98.8 2.4E-08 8.1E-13 74.5 8.0 77 150-231 5-87 (111)
315 3oja_B Anopheles plasmodium-re 98.8 1.1E-08 3.9E-13 99.6 7.9 97 46-142 76-178 (597)
316 2ptt_A CD48 antigen; CD244, CD 98.8 2.2E-08 7.6E-13 74.5 7.7 92 152-246 10-108 (110)
317 3uzq_A Anti-dengue MAB 4E11; d 98.8 1.6E-08 5.5E-13 87.2 7.9 103 146-248 134-246 (253)
318 1dce_A Protein (RAB geranylger 98.8 9.6E-09 3.3E-13 99.1 7.1 84 46-129 464-551 (567)
319 1ogq_A PGIP-2, polygalacturona 98.8 1.7E-08 6E-13 90.0 8.3 97 47-143 52-157 (313)
320 1ziw_A TOLL-like receptor 3; i 98.7 1.3E-08 4.5E-13 100.7 8.1 97 47-143 482-592 (680)
321 1xeu_A Internalin C; cellular 98.7 1.6E-08 5.5E-13 87.9 7.7 76 47-126 65-143 (263)
322 1f2q_A High affinity immunoglo 98.7 6.7E-09 2.3E-13 84.2 5.0 79 146-245 5-84 (176)
323 4fcg_A Uncharacterized protein 98.7 1.9E-08 6.4E-13 90.5 8.2 96 47-143 152-261 (328)
324 3t6q_A CD180 antigen; protein- 98.7 1.2E-08 4.2E-13 99.5 7.5 96 47-142 35-136 (606)
325 4ay9_X Follicle-stimulating ho 98.7 1.4E-08 4.9E-13 92.1 7.5 94 46-139 31-132 (350)
326 3v2a_R Vascular endothelial gr 98.7 1.1E-09 3.8E-14 109.8 0.0 93 146-249 667-759 (772)
327 1q0x_L FAB 9B1, light chain; a 98.7 4.2E-08 1.4E-12 82.0 9.6 94 152-245 7-109 (212)
328 1jbj_A CD3 epsilon and gamma e 98.7 1.2E-08 4E-13 83.8 6.1 61 157-236 119-179 (186)
329 3juy_B 3B3 single chain varian 98.7 4.3E-08 1.5E-12 84.6 9.9 90 146-235 150-245 (256)
330 1nqb_A Single-chain antibody f 98.7 3.9E-08 1.3E-12 85.0 9.6 103 146-248 122-235 (256)
331 1xt5_A Variable region-contain 98.7 2.2E-08 7.7E-13 77.3 7.3 96 150-246 9-133 (135)
332 2d9c_A Signal-regulatory prote 98.7 5E-08 1.7E-12 75.6 9.2 98 148-248 11-123 (136)
333 2wng_A Tyrosine-protein phosph 98.7 2E-08 6.8E-13 90.0 7.9 97 148-248 6-117 (327)
334 3bkj_L WO2 IGG2A FAB fragment 98.7 4.1E-08 1.4E-12 84.5 9.5 99 148-246 37-146 (252)
335 3kg5_A B-cell antigen receptor 98.7 6.4E-08 2.2E-12 74.7 9.6 95 148-248 21-121 (134)
336 4fmk_A Poliovirus receptor-rel 98.7 2.4E-08 8.1E-13 83.7 7.9 97 152-248 8-122 (225)
337 1p4b_L Antibody variable light 98.7 7.5E-08 2.6E-12 74.5 10.1 95 152-246 12-115 (135)
338 2r15_A Myomesin-1; sarcomeric 98.7 2.8E-08 9.4E-13 82.9 8.2 79 158-245 15-94 (212)
339 2z63_A TOLL-like receptor 4, v 98.7 1.7E-08 5.6E-13 97.7 7.8 94 47-140 30-129 (570)
340 2z66_A Variable lymphocyte rec 98.7 1.7E-08 5.9E-13 89.6 7.3 94 48-141 129-229 (306)
341 2ec8_A MAST/stem cell growth f 98.7 2.4E-08 8E-13 95.6 8.7 90 153-250 321-415 (524)
342 1sy6_A T-cell surface glycopro 98.7 8.4E-09 2.9E-13 86.1 4.9 75 158-244 126-202 (204)
343 4dkd_C Macrophage colony-stimu 98.7 1.8E-08 6E-13 88.5 7.2 96 146-248 187-283 (292)
344 4dep_C Interleukin-1 receptor 98.7 2.2E-09 7.5E-14 97.1 1.2 90 156-247 237-334 (349)
345 1hkf_A NKP44, NK cell activati 98.7 1.5E-07 5.1E-12 71.4 11.3 97 148-244 13-119 (122)
346 2qhl_A Novel immune-type recep 98.7 3.6E-08 1.2E-12 73.5 7.7 83 151-233 5-99 (111)
347 3qs7_E FL cytokine receptor; i 98.7 1.4E-08 4.9E-13 94.6 6.6 84 153-249 334-417 (423)
348 1cs6_A Axonin-1; neural cell a 98.7 3.9E-08 1.3E-12 89.9 9.5 87 152-253 214-300 (382)
349 3mj6_A Junctional adhesion mol 98.7 2.5E-08 8.5E-13 86.5 7.8 96 151-249 124-240 (268)
350 1hng_A CD2; T lymphocyte adhes 98.7 1E-08 3.6E-13 83.3 5.0 66 159-244 109-174 (176)
351 2or7_A T-cell immunoglobulin a 98.7 4.2E-08 1.4E-12 73.6 8.0 97 151-247 3-111 (115)
352 1ncn_A T lymphocyte activation 98.7 4.8E-08 1.6E-12 72.6 8.3 86 154-241 3-100 (110)
353 1ugn_A LIR1, leukocyte immunog 98.7 2.8E-08 9.6E-13 82.2 7.6 72 154-234 109-181 (198)
354 1u3h_A T-cell receptor alpha-c 98.2 1.6E-09 5.6E-14 80.8 0.0 83 150-232 4-93 (110)
355 1vca_A VCAM-D1,2, human vascul 98.7 7.1E-08 2.4E-12 80.2 10.1 90 155-249 101-200 (202)
356 1fo0_B Protein (BM3.3 T cell r 98.7 6.9E-08 2.4E-12 72.1 9.0 82 150-232 6-96 (112)
357 1jbj_A CD3 epsilon and gamma e 98.7 1.4E-08 4.9E-13 83.3 5.7 71 155-245 9-80 (186)
358 2xzc_L FAB A.17 light chain; i 98.7 9E-08 3.1E-12 80.2 10.7 94 152-245 7-109 (216)
359 2c1o_A IGK-C protein; FAB frag 98.7 4.9E-08 1.7E-12 84.0 9.3 100 146-245 39-149 (254)
360 4dep_C Interleukin-1 receptor 98.7 2.6E-08 9E-13 90.0 7.9 97 149-249 11-118 (349)
361 2pet_A Lutheran blood group gl 98.7 3E-08 1E-12 83.8 7.8 100 150-249 5-117 (231)
362 3p2t_A Leukocyte immunoglobuli 98.7 1.6E-08 5.6E-13 83.5 6.0 70 156-234 110-179 (196)
363 2z35_A T-cell receptor alpha-c 98.7 4.9E-08 1.7E-12 72.9 8.1 81 150-230 5-92 (112)
364 2gjj_A A21 single-chain antibo 98.7 5E-08 1.7E-12 84.8 9.3 101 147-247 7-119 (264)
365 3o4o_C Interleukin-1 receptor 98.7 1.4E-08 4.8E-13 91.4 5.9 95 146-249 19-120 (339)
366 3bp6_A Programmed cell death p 98.7 9.5E-08 3.3E-12 71.9 9.6 97 150-246 4-113 (117)
367 1fo0_A Protein (BM3.3 T cell r 98.7 4.8E-08 1.6E-12 73.5 7.9 82 150-231 5-95 (116)
368 1tvd_A T cell receptor, ES204 98.7 6.6E-08 2.2E-12 72.7 8.6 83 150-232 5-98 (116)
369 2ec8_A MAST/stem cell growth f 98.7 7.8E-08 2.7E-12 92.0 11.3 99 146-250 212-313 (524)
370 3moq_A NEW antigen receptor va 98.7 3.5E-08 1.2E-12 75.3 7.1 80 149-233 4-89 (126)
371 1oll_A NK receptor; immune sys 98.7 6.2E-08 2.1E-12 79.5 9.1 89 146-246 5-95 (188)
372 3pv7_A B7-H6, IG-like domain-c 98.7 2.3E-08 7.8E-13 85.8 6.6 99 151-249 9-121 (248)
373 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.7 5E-08 1.7E-12 84.2 8.8 100 147-246 5-116 (256)
374 3rjd_A High affinity immunoglo 98.7 2.9E-08 1E-12 85.5 7.4 81 146-247 2-83 (262)
375 1ugn_A LIR1, leukocyte immunog 98.7 1.4E-08 4.6E-13 84.1 5.0 89 146-246 6-97 (198)
376 1x9q_A SCFV, 4M5.3 anti-fluore 98.7 4.7E-08 1.6E-12 85.1 8.6 102 145-246 15-127 (268)
377 2y25_A Myomesin; structural pr 98.7 2.2E-08 7.6E-13 88.9 6.6 89 146-246 8-97 (317)
378 1uct_A Immunoglobulin alpha FC 98.7 3.2E-08 1.1E-12 83.4 7.3 89 146-246 10-102 (218)
379 3gkz_A Anti-methamphetamine si 98.7 1.3E-07 4.4E-12 81.6 11.3 102 146-247 142-250 (257)
380 2ocw_A Polymeric-immunoglobuli 98.7 9.8E-08 3.4E-12 92.5 11.6 108 146-254 332-449 (585)
381 2v5m_A Dscam; neurobiology SPL 98.7 4.1E-08 1.4E-12 90.0 8.5 98 146-254 4-110 (388)
382 1z7z_I Intercellular adhesion 98.7 1.5E-08 5.3E-13 94.9 5.7 72 153-246 378-449 (450)
383 1sq2_N Novel antigen receptor; 98.7 4.9E-08 1.7E-12 73.1 7.3 78 150-232 5-88 (113)
384 2gki_A Nuclease; anti-DNA anti 98.7 1.4E-07 4.7E-12 83.2 11.4 101 147-247 161-273 (291)
385 2rcj_C Light chain; immunoglob 98.7 9E-08 3.1E-12 91.5 11.0 96 150-245 5-108 (523)
386 3oq3_B IFN-alpha/beta binding 98.7 1E-07 3.4E-12 85.5 10.7 87 151-244 234-328 (329)
387 1ry7_B FGFR-3, fibroblast grow 98.7 2E-08 6.8E-13 90.1 5.9 87 154-248 132-218 (334)
388 3rjd_A High affinity immunoglo 98.7 7.4E-08 2.5E-12 83.0 9.4 80 151-247 88-168 (262)
389 2coq_A NEW antigen receptor va 98.7 4.6E-08 1.6E-12 72.6 6.9 77 150-231 5-87 (108)
390 3sbw_C Programmed cell death 1 98.7 1.1E-07 3.7E-12 79.8 10.1 86 156-248 127-213 (222)
391 1nfd_E H57 FAB; complex (immun 98.7 6.2E-08 2.1E-12 80.9 8.5 81 152-232 6-91 (212)
392 2j6e_L IGM, FAB light chain; a 98.7 7.4E-08 2.5E-12 81.7 9.0 94 152-245 26-129 (234)
393 4ezg_A Putative uncharacterize 98.7 4.4E-08 1.5E-12 81.2 7.4 94 47-143 68-167 (197)
394 3cvr_A Invasion plasmid antige 98.7 2E-08 6.9E-13 96.6 6.1 83 38-128 55-137 (571)
395 2id5_A Lingo-1, leucine rich r 98.7 3.1E-08 1.1E-12 93.8 7.2 108 33-142 1-111 (477)
396 3oq3_B IFN-alpha/beta binding 98.7 3.7E-08 1.3E-12 88.4 7.4 82 155-248 138-226 (329)
397 1qok_A MFE-23 recombinant anti 98.7 9.3E-08 3.2E-12 83.9 9.8 98 148-246 165-268 (282)
398 2jju_A Signal regulatory prote 98.6 6.1E-08 2.1E-12 74.2 7.5 81 150-233 8-97 (127)
399 2atp_B T-cell surface glycopro 98.6 1.3E-07 4.6E-12 70.8 9.0 82 151-232 4-101 (115)
400 3r0n_A Poliovirus receptor-rel 98.6 1.6E-07 5.6E-12 71.7 9.6 94 151-244 8-128 (128)
401 1oll_A NK receptor; immune sys 98.6 4.9E-08 1.7E-12 80.1 6.7 66 154-233 107-172 (188)
402 4fcg_A Uncharacterized protein 98.6 7.4E-08 2.5E-12 86.5 8.5 96 46-143 128-237 (328)
403 3bik_B Programmed cell death p 98.6 2.2E-07 7.4E-12 71.8 9.9 99 150-248 14-125 (134)
404 2o26_X MAST/stem cell growth f 98.6 1.1E-07 3.9E-12 83.3 9.4 84 145-251 12-95 (290)
405 2yz1_A Tyrosine-protein phosph 98.6 9.2E-08 3.1E-12 72.3 7.6 85 148-233 10-101 (120)
406 3bj9_1 Immunoglobulin IOTA cha 98.6 1.9E-07 6.5E-12 70.1 9.3 82 152-233 5-100 (116)
407 3sb4_A Hypothetical leucine ri 98.6 4.8E-08 1.7E-12 87.8 7.0 93 46-139 227-325 (329)
408 4dzb_B Vbeta2 (MAIT T cell rec 98.6 1.6E-07 5.4E-12 80.4 9.9 99 148-246 4-117 (246)
409 1uct_A Immunoglobulin alpha FC 98.6 3.9E-08 1.3E-12 82.9 5.9 82 154-248 114-200 (218)
410 1nko_A Sialic acid binding IG- 98.6 2E-07 6.8E-12 71.7 9.4 97 151-247 12-128 (132)
411 2otu_A FV light chain variable 98.6 3.5E-07 1.2E-11 68.5 10.5 82 152-233 8-99 (115)
412 2edo_A CD48 antigen; beta-sand 98.6 4.9E-08 1.7E-12 74.0 5.8 94 153-249 12-113 (121)
413 1nkr_A P58-CL42 KIR; inhibitor 98.6 6.8E-08 2.3E-12 80.1 7.1 92 146-247 9-105 (201)
414 1c1e_H Catalytic antibody 1E9 98.6 2E-07 6.9E-12 78.2 10.0 95 152-246 7-119 (219)
415 2hp4_A T-cell surface glycopro 98.6 2.9E-07 9.9E-12 68.9 9.8 83 150-232 5-99 (114)
416 4b8c_D Glucose-repressible alc 98.6 1.2E-08 4.1E-13 101.5 2.7 87 46-133 248-338 (727)
417 1nqb_A Single-chain antibody f 98.6 1.6E-07 5.4E-12 81.1 9.5 98 151-248 6-122 (256)
418 2d3v_A Leukocyte immunoglobuli 98.6 7.6E-08 2.6E-12 79.5 7.1 74 154-235 108-181 (196)
419 3ry4_A Low affinity immunoglob 98.6 5E-08 1.7E-12 78.4 5.8 80 148-248 7-87 (170)
420 2z7x_B TOLL-like receptor 1, v 98.6 7.9E-08 2.7E-12 91.9 8.1 69 67-136 400-469 (520)
421 3juy_B 3B3 single chain varian 98.6 1.2E-07 4.3E-12 81.7 8.5 101 147-247 8-134 (256)
422 3s97_C Contactin-1; carbonic a 98.6 7.7E-08 2.6E-12 79.2 6.7 79 151-238 14-94 (201)
423 1f3r_B FV antibody fragment; I 98.6 2.7E-07 9.2E-12 79.7 10.4 96 152-247 7-124 (257)
424 3dmk_A DOWN syndrome cell adhe 98.6 1.9E-07 6.4E-12 94.4 10.7 96 150-249 434-529 (816)
425 3r4d_A CEA-related cell adhesi 98.6 1.4E-07 4.9E-12 78.2 8.3 93 153-248 7-110 (208)
426 3mj8_L Stimulatory hamster ant 98.6 5.1E-08 1.7E-12 81.5 5.3 91 146-241 115-208 (213)
427 2fbo_J V1V2;, variable region- 98.6 6E-08 2E-12 83.0 5.9 97 150-247 7-132 (250)
428 3o4o_C Interleukin-1 receptor 98.6 1E-08 3.4E-13 92.4 1.0 100 146-245 227-334 (339)
429 1xeu_A Internalin C; cellular 98.6 1.2E-07 4.1E-12 82.3 7.6 90 46-141 42-134 (263)
430 1wio_A CD4, T-cell surface gly 98.6 1E-07 3.4E-12 86.7 7.4 75 155-248 106-180 (363)
431 1nez_G T-cell surface glycopro 98.6 2.6E-07 8.8E-12 70.7 8.5 85 148-232 7-107 (128)
432 3nfj_J T cell receptor beta ch 98.6 3.1E-07 1E-11 78.6 9.9 97 150-246 6-116 (245)
433 2dru_A Chimera of CD48 antigen 98.5 2.7E-07 9.4E-12 75.1 9.1 93 153-248 7-106 (180)
434 3mj6_A Junctional adhesion mol 98.5 6.8E-08 2.3E-12 83.7 5.8 99 147-245 7-121 (268)
435 1ogq_A PGIP-2, polygalacturona 98.5 6.8E-08 2.3E-12 86.1 5.8 96 47-142 78-181 (313)
436 1xed_A Polymeric-immunoglobuli 98.5 5.4E-07 1.9E-11 67.7 9.9 96 151-246 6-111 (117)
437 3bqu_C 3H6 FAB light chain; be 98.5 3.6E-08 1.2E-12 83.7 3.8 100 147-246 25-130 (233)
438 1wwl_A Monocyte differentiatio 98.5 3E-08 1E-12 88.5 3.3 90 47-136 175-278 (312)
439 2pet_A Lutheran blood group gl 98.5 7.5E-08 2.6E-12 81.3 5.7 81 147-232 120-211 (231)
440 3dmm_D T-cell surface glycopro 98.5 4.2E-07 1.5E-11 71.6 9.7 101 147-247 3-120 (150)
441 3j0a_A TOLL-like receptor 5; m 98.5 1.2E-07 4.2E-12 96.1 8.2 96 47-142 268-369 (844)
442 3b5h_A Cervical EMMPRIN, HAB18 98.5 2.6E-07 9E-12 75.1 8.7 80 155-253 8-89 (184)
443 1wio_A CD4, T-cell surface gly 98.5 1.6E-07 5.6E-12 85.3 8.2 93 153-246 184-293 (363)
444 2ghw_B Anti-SARS SCFV antibody 98.5 2.8E-07 9.6E-12 78.9 9.2 96 152-247 9-120 (247)
445 2aw2_A B and T lymphocyte atte 98.5 6.5E-07 2.2E-11 63.4 9.1 89 153-246 19-110 (120)
446 3bdb_A Novel immune-type recep 98.5 2.7E-07 9.2E-12 71.5 8.2 97 152-248 6-115 (137)
447 3o53_A Protein LRIM1, AGAP0063 98.5 6.4E-08 2.2E-12 86.5 5.2 95 46-142 81-176 (317)
448 1hnf_A CD2; T lymphocyte adhes 98.5 2.4E-07 8.3E-12 75.6 8.2 92 153-247 7-105 (182)
449 2h32_A Immunoglobulin IOTA cha 98.5 9.9E-08 3.4E-12 72.9 5.5 94 152-245 7-114 (126)
450 3mjg_X Beta-type platelet-deri 98.5 1.6E-07 5.6E-12 82.2 7.7 85 146-245 1-89 (289)
451 3esu_F Antibody 14B7* light ch 98.5 2.5E-07 8.5E-12 79.4 8.7 82 150-231 136-231 (250)
452 3o53_A Protein LRIM1, AGAP0063 98.5 4.6E-08 1.6E-12 87.4 4.1 92 47-143 60-152 (317)
453 4fom_A Poliovirus receptor-rel 98.5 2.2E-07 7.6E-12 82.3 8.5 97 152-248 6-113 (308)
454 1h6u_A Internalin H; cell adhe 98.5 1.4E-07 4.6E-12 84.0 7.0 77 48-127 66-145 (308)
455 3noi_A Natural cytotoxicity tr 98.5 1.1E-07 3.6E-12 72.0 5.4 78 151-232 13-103 (120)
456 2gi7_A GPVI protein; IG-like d 98.5 4.3E-08 1.5E-12 80.2 3.4 67 154-234 102-168 (184)
457 3qs9_E FL cytokine receptor; i 98.5 3.5E-07 1.2E-11 87.6 10.2 92 151-249 233-326 (527)
458 4glp_A Monocyte differentiatio 98.5 1.2E-07 3.9E-12 84.5 6.4 79 47-125 93-183 (310)
459 2ol3_A BM3.3 T-cell receptor a 98.5 5.1E-07 1.7E-11 70.4 9.3 83 149-231 4-95 (142)
460 1dr9_A B7-1 (CD80), T lymphocy 98.5 4.9E-07 1.7E-11 74.7 9.8 77 158-242 119-197 (201)
461 2p1y_A Bispecific alpha/beta T 98.5 1.4E-07 4.8E-12 80.2 6.6 99 149-248 4-116 (238)
462 3r8b_B G5-8, enterotoxin type 98.5 1.1E-06 3.9E-11 66.8 11.0 99 149-247 9-117 (125)
463 1qok_A MFE-23 recombinant anti 98.5 3.2E-07 1.1E-11 80.4 9.0 98 150-247 31-147 (282)
464 3dmk_A DOWN syndrome cell adhe 98.5 4.6E-07 1.6E-11 91.4 11.4 96 153-256 627-723 (816)
465 1ds9_A Outer arm dynein; leuci 98.5 4.8E-09 1.6E-13 87.1 -2.7 91 47-140 50-145 (198)
466 3nl4_H Antigen binding fragmen 98.5 2.4E-07 8.1E-12 77.6 7.7 94 152-245 6-114 (215)
467 1wwl_A Monocyte differentiatio 98.5 6.8E-08 2.3E-12 86.1 4.6 78 47-124 97-186 (312)
468 2ny1_B T-cell surface glycopro 98.5 1.4E-07 4.9E-12 76.8 6.2 82 153-234 3-92 (184)
469 2oz4_A Intercellular adhesion 98.5 5.5E-07 1.9E-11 77.9 10.3 79 155-248 13-99 (265)
470 3eow_R Poliovirus receptor; im 98.5 6.9E-08 2.3E-12 81.2 4.4 99 151-249 5-118 (221)
471 1c1e_H Catalytic antibody 1E9 98.5 8.4E-08 2.9E-12 80.6 4.9 82 154-242 133-216 (219)
472 3oja_A Leucine-rich immune mol 98.5 8.5E-08 2.9E-12 91.0 5.4 60 67-126 121-184 (487)
473 4frw_A Poliovirus receptor-rel 98.5 3.4E-07 1.2E-11 76.1 8.6 97 151-247 5-117 (218)
474 1op3_H FAB 2G12, heavy chain; 98.5 6.5E-07 2.2E-11 75.6 10.4 95 152-246 7-123 (225)
475 1h6t_A Internalin B; cell adhe 98.5 1.6E-07 5.3E-12 82.9 6.7 91 47-142 92-185 (291)
476 3bia_X T-cell immunoglobulin a 98.5 6.9E-07 2.4E-11 67.0 9.3 97 152-248 3-113 (116)
477 2y23_A Myomesin; structural pr 98.5 5.9E-07 2E-11 79.4 10.4 77 154-239 116-195 (312)
478 3oja_A Leucine-rich immune mol 98.5 6.1E-08 2.1E-12 91.9 4.2 75 67-141 100-175 (487)
479 2wbj_D OB TCR; transmembrane, 98.5 5.2E-07 1.8E-11 78.9 9.9 101 146-246 25-142 (279)
480 3fku_X Neutralizing antibody F 98.5 5E-07 1.7E-11 79.1 9.8 101 145-246 140-250 (280)
481 2zg1_A Sialic acid-binding IG- 98.5 4.2E-07 1.4E-11 75.8 8.9 98 151-248 6-124 (214)
482 3gkz_A Anti-methamphetamine si 98.5 7.4E-07 2.5E-11 76.8 10.7 96 152-247 15-127 (257)
483 3umt_A SCFV heavy chain and li 98.5 5.8E-07 2E-11 77.4 10.0 95 152-246 9-121 (256)
484 3d9a_L Light chain of hyhel10 98.5 9.6E-08 3.3E-12 79.7 4.9 79 153-236 120-203 (213)
485 1h6u_A Internalin H; cell adhe 98.5 2E-07 7E-12 82.8 7.3 92 46-142 42-136 (308)
486 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.5 5.9E-07 2E-11 77.4 9.9 101 145-246 137-248 (256)
487 1qgc_4 Protein (immunoglobulin 98.5 2.7E-07 9.2E-12 86.0 8.3 97 149-245 5-111 (438)
488 3pl6_D MBP peptide / T-cell re 98.5 6.8E-07 2.3E-11 77.5 10.4 100 146-246 27-138 (268)
489 1itb_B Type 1 interleukin-1 re 98.5 4.2E-07 1.4E-11 80.6 9.2 79 155-245 113-201 (315)
490 3to4_D NKT vbeta2 (mouse varia 98.5 6E-07 2.1E-11 77.2 9.9 95 151-246 7-116 (253)
491 2rcj_C Light chain; immunoglob 98.5 3E-07 1E-11 87.9 8.8 88 154-247 228-317 (523)
492 1dr9_A B7-1 (CD80), T lymphocy 98.5 1.2E-07 4.2E-12 78.3 5.3 93 154-247 3-107 (201)
493 1za6_B IGG heavy chain; immuno 98.5 4.2E-07 1.4E-11 82.0 9.2 95 152-246 7-115 (344)
494 1q0x_L FAB 9B1, light chain; a 98.5 2.8E-07 9.4E-12 76.9 7.4 82 153-239 123-208 (212)
495 2fbj_H IGA-kappa J539 FAB (hea 98.5 9E-07 3.1E-11 74.4 10.6 95 152-246 7-118 (220)
496 1pz5_B Heavy chain of FAB (SYA 98.5 7.1E-07 2.4E-11 74.9 10.0 95 152-246 7-120 (220)
497 2frg_P TREM-like transcript-1; 98.5 1.7E-06 5.8E-11 63.7 10.8 94 152-245 4-104 (106)
498 1q9r_B S25-2 FAB (IGG1K) heavy 98.5 7.9E-08 2.7E-12 80.9 3.9 80 156-242 138-219 (222)
499 3uzq_A Anti-dengue MAB 4E11; d 98.5 4.7E-07 1.6E-11 77.9 8.9 97 150-246 6-117 (253)
500 1h6t_A Internalin B; cell adhe 98.5 2.1E-07 7.1E-12 82.1 6.7 92 46-142 69-163 (291)
No 1
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=232.57 Aligned_cols=95 Identities=26% Similarity=0.446 Sum_probs=70.2
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+..+.+.+|++++|.|.+ +.|.|.+.|+++++.+...... ..++.+ ...+.|.|.+++.+|+|.|
T Consensus 342 P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~-----~~~~~~---~~~~~L~I~~v~~~D~G~Y 412 (440)
T 3zyj_A 342 PVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAY-----KVRIAV---LSDGTLNFTNVTVQDTGMY 412 (440)
T ss_dssp CCEEECCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSC-----CSSEEE---CTTCCEEESSCCSTTCEEE
T ss_pred CcccccccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCC-----CceEEE---ccCCeEEEccCChhhCEEE
Confidence 334445677889999999999999 6789999999966554432110 112221 2346799999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEeecCC
Q psy12695 226 TCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
+|.|.|..|..++.+.+.|...+.
T Consensus 413 ~C~a~N~~G~~~~~~~~~v~~~~~ 436 (440)
T 3zyj_A 413 TCMVSNSVGNTTASATLNVTGTHH 436 (440)
T ss_dssp EEEEECSSCEEEEEEEEEEC----
T ss_pred EEEEEcCCCcEEEEEEEEEecccc
Confidence 999999999999999999987654
No 2
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.96 E-value=8.3e-28 Score=220.73 Aligned_cols=204 Identities=22% Similarity=0.354 Sum_probs=138.8
Q ss_pred CcCcCCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hh------------------------
Q psy12695 29 LQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RY------------------------ 81 (369)
Q Consensus 29 ~~~~~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~------------------------ 81 (369)
......||..|.|.. ..++|++++|+.+|..+|..++.|+|++|+|. +.
T Consensus 6 ~~~~~~Cp~~C~C~~----~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~ 81 (361)
T 2xot_A 6 GRSVVSCPANCLCAS----NILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISS 81 (361)
T ss_dssp -CCCTTCCTTCEEET----TEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECT
T ss_pred CCcCCCCCCCCEECC----CEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccCh
Confidence 356789999999984 58999999999999999998999999888833 33
Q ss_pred -hccCCcccCeeeccCCcccccCCcccccccccccccccccceecccCCcccccCcC-----------------------
Q psy12695 82 -TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL----------------------- 137 (369)
Q Consensus 82 -~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~f~~l~~l----------------------- 137 (369)
+|.++++|+.|+|++|+|+.+++..|.++++|+.|+|++|.|+.+.++.|.++++|
T Consensus 82 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~ 161 (361)
T 2xot_A 82 EAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNK 161 (361)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----
T ss_pred hhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCccc
Confidence 45555555555555555555555555555555555555555544443333322210
Q ss_pred -----------------------------------ccccccCC-----------------------------CCc-----
Q psy12695 138 -----------------------------------NLEDFACS-----------------------------PNI----- 148 (369)
Q Consensus 138 -----------------------------------~~~~~~c~-----------------------------p~i----- 148 (369)
..+.+.|. |..
T Consensus 162 l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l~~~~~~~~~~~~~~~~~~~~~~~C~~p~~~~~~~ 241 (361)
T 2xot_A 162 LPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKLYQLFSHWQYRQLSSVMDFQEDLYCMHSKKLHNIF 241 (361)
T ss_dssp CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHHHHHHHHHHHHTTCHHHHTTGGGCEEESSSCCEEGG
T ss_pred CCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcCcHHHHHHHHHhcCCchhccCcCCEeCCChHHcCcc
Confidence 11112221 100
Q ss_pred --------cCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCC
Q psy12695 149 --------RPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMS 220 (369)
Q Consensus 149 --------~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 220 (369)
...+.++++.+|+.+.|.|.+.| |.|.|.|+++++.+..... ...++.+ ..+.|.|.+++.+
T Consensus 242 ~~~~~~C~~~~~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~-----~~~r~~~----~~~~L~I~~v~~~ 311 (361)
T 2xot_A 242 SLDFFNCSEYKESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQG-----SNGSVSV----RNGDLFFKKVQVE 311 (361)
T ss_dssp GCCCTTCCSCCCCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCC-----SSSSEEE----ETTEEEESSCCTT
T ss_pred ccccccCCCccccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecc-----cCCceEe----ecCeEEEeecCcc
Confidence 01245678999999999999999 9999999998765433211 1112322 3567999999999
Q ss_pred CCEEEEEEEEeCCceEEEEEEEEEee
Q psy12695 221 DSGIYTCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 221 D~G~Y~C~a~n~~g~~~~~~~l~v~~ 246 (369)
|+|.|+|.|.|..|..+..+.|.|..
T Consensus 312 D~G~Y~C~a~N~~g~~~~~~~l~V~~ 337 (361)
T 2xot_A 312 DGGVYTCYAMGETFNETLSVELKVYN 337 (361)
T ss_dssp SCEEEEEEEECSSCEEEEEEEEEEES
T ss_pred cCEEEEEEEecCCCccEEEEEEEEEe
Confidence 99999999999999999999999965
No 3
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=6.5e-28 Score=228.20 Aligned_cols=94 Identities=28% Similarity=0.464 Sum_probs=69.2
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+....+.+|+.++|.|.+. |.|.|.|+++++........ ..++.+ ...+.|.|.+++.+|+|.|
T Consensus 353 P~i~~~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~-----~~~~~~---~~~g~L~i~~v~~~D~G~Y 422 (452)
T 3zyi_A 353 PFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASR-----HPRISV---LNDGTLNFSHVLLSDTGVY 422 (452)
T ss_dssp CCCSBCCCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCC-----CSSCEE---CTTSCEECSSCCTTCCEEE
T ss_pred cccccccccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCC-----CCCEEE---CCCCeEEEeecCHHHCEEE
Confidence 4455567778999999999999998 99999999966544322110 111111 2346799999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEeecCC
Q psy12695 226 TCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
+|.|.|..|..++.+.|.|...+.
T Consensus 423 ~C~a~N~~G~~~~~~~l~v~~~~~ 446 (452)
T 3zyi_A 423 TCMVTNVAGNSNASAYLNVSTAGT 446 (452)
T ss_dssp EEEEECSSCEEEEEEEEEC-----
T ss_pred EEEEEcCCCcEEEEEEEEEEcccc
Confidence 999999999999999999987654
No 4
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.95 E-value=1.4e-28 Score=224.69 Aligned_cols=199 Identities=20% Similarity=0.340 Sum_probs=162.8
Q ss_pred CCCCC-eecccCCceEEEecCC-CCCccCCCCCCC--ccEEEeec-cee---ChhhccCCcccCeeeccCCcccccCCcc
Q psy12695 35 CPSTC-ECKWKGGKETVLCKAK-NFTTIPEQLDVG--TQVLDLSD-NFL---DRYTFRKLINLVELDLSYNQIQFVPSHI 106 (369)
Q Consensus 35 cp~~C-~c~~~~~~~~~~c~~~-~l~~ip~~~~~~--~~~L~l~~-n~i---~~~~f~~l~~L~~L~Ls~N~l~~i~~~~ 106 (369)
||..| .|.+ ..++|+++ +|+.||. ++.. ++.|+|++ |+| .+.+|.+|++|+.|+|++|+|+.+++.+
T Consensus 1 cp~~c~~C~~----~~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 75 (347)
T 2ifg_A 1 CPDACCPHGS----SGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75 (347)
T ss_dssp CCSSSCCSSS----SCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTG
T ss_pred CCCcCccccC----CEEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHH
Confidence 99999 9985 46899998 9999999 8754 99999996 885 4788999999999999999999999999
Q ss_pred cccccccccccccccceecccCCcccccC--c---------------------------CccccccC-------------
Q psy12695 107 LDSILELRELKLSGNPIQKITHEAFINVP--K---------------------------LNLEDFAC------------- 144 (369)
Q Consensus 107 f~~l~~L~~L~L~~N~l~~~~~~~f~~l~--~---------------------------l~~~~~~c------------- 144 (369)
|.+|++|+.|+|++|.|+.+++..|..+. . ++.+.+.|
T Consensus 76 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~~l~~l~~~~ 155 (347)
T 2ifg_A 76 FHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPLAHMPNAS 155 (347)
T ss_dssp GGSCSCCCEEECCSSCCSCCCSTTTCSCCCCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSSCSSCCCCTT
T ss_pred hcCCcCCCEEeCCCCccceeCHHHcccCCceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCChHHhcCCccc
Confidence 99999999999999999999998887543 1 11233444
Q ss_pred --CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCC
Q psy12695 145 --SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 145 --~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 222 (369)
.|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+...... ......+.|.|.+++.+|+
T Consensus 156 c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~-----------~~~~~~~~L~i~~v~~~D~ 224 (347)
T 2ifg_A 156 CGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMK-----------SGGLPSLGLTLANVTSDLN 224 (347)
T ss_dssp CCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECC-----------CCCSSEEEEEEESCCSTTT
T ss_pred CCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccccc-----------ceecccceEEEeeCChHHC
Confidence 244444567788999999999999999999999999988654321110 0123467899999999999
Q ss_pred E-EEEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 223 G-IYTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 223 G-~Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
| .|+|.|.|..|..+..+.|.|..++.
T Consensus 225 G~~Y~C~a~n~~g~~~~~~~l~V~~~P~ 252 (347)
T 2ifg_A 225 RKNVTCWAENDVGRAEVSVQVNVSFPAS 252 (347)
T ss_dssp TCCEEECCEETTEECCEEECCCCBEEEE
T ss_pred CCeEEEEEEcCCCCEEEEEEEEEcCCCe
Confidence 9 99999999999988888888766554
No 5
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.92 E-value=8.6e-25 Score=208.20 Aligned_cols=84 Identities=27% Similarity=0.466 Sum_probs=66.0
Q ss_pred CCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeC
Q psy12695 153 PDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 232 (369)
..+.+.+|+.++|.|.+.|.|.|.+.|+++++.+..... ..++.+ ...+.|.|.+++.+|+|.|+|.|.|.
T Consensus 393 ~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~------~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~ 463 (477)
T 2id5_A 393 QQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKS------NGRLTV---FPDGTLEVRYAQVQDNGTYLCIAANA 463 (477)
T ss_dssp EEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------------CEE---CTTSCEEESSCCSTTCEEEEEEEEET
T ss_pred ccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCC------CceEEe---CCCCEEEEeeCChHHCEEEEEEEEeC
Confidence 456788999999999999999999999998876542111 111111 22467999999999999999999999
Q ss_pred CceEEEEEEEEEe
Q psy12695 233 AGEVFTNISLNVI 245 (369)
Q Consensus 233 ~g~~~~~~~l~v~ 245 (369)
.|..+..+.|.|.
T Consensus 464 ~g~~~~~~~l~V~ 476 (477)
T 2id5_A 464 GGNDSMPAHLHVR 476 (477)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCcEEEEEEEEEe
Confidence 9999999888885
No 6
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.84 E-value=3e-20 Score=169.50 Aligned_cols=193 Identities=19% Similarity=0.238 Sum_probs=141.4
Q ss_pred ceEEEecC-CCCCccCCC-C--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccccccc
Q psy12695 47 KETVLCKA-KNFTTIPEQ-L--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLS 119 (369)
Q Consensus 47 ~~~~~c~~-~~l~~ip~~-~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 119 (369)
.+.++.++ |.|+.+|.. + ...++.|+|++|+|. +.+|.+|++|+.|||++|+|+.+++..|..+. |+.|+|.
T Consensus 33 L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~ 111 (347)
T 2ifg_A 33 LTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLS 111 (347)
T ss_dssp CSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECC
T ss_pred eeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEee
Confidence 67899996 999999864 3 357999999999954 78999999999999999999999999999886 9999999
Q ss_pred ccceecccC-----------------C--------cccccC-------c-------------------------------
Q psy12695 120 GNPIQKITH-----------------E--------AFINVP-------K------------------------------- 136 (369)
Q Consensus 120 ~N~l~~~~~-----------------~--------~f~~l~-------~------------------------------- 136 (369)
+|+|.+.+. + .+..++ .
T Consensus 112 ~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~~l~~l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~ 191 (347)
T 2ifg_A 112 GNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPLAHMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAG 191 (347)
T ss_dssp SSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSSCSSCCCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCC
T ss_pred CCCccCCCccHHHHHHHHhCcccccccCCCCCCChHHhcCCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEE
Confidence 999875332 0 011111 0
Q ss_pred ------------------------------Cccc-cccCCCCcc-------------CCCC--CeeeccCCeEEEEEEee
Q psy12695 137 ------------------------------LNLE-DFACSPNIR-------------PITP--DVTAEENENVTLSCRAT 170 (369)
Q Consensus 137 ------------------------------l~~~-~~~c~p~i~-------------~~~~--~~~~~~G~~~~l~C~~~ 170 (369)
-+.+ .|.|...-. ..|. ...+.+|+.+.|.|.+.
T Consensus 192 W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i~~~~~~~g~~v~l~C~~~ 271 (347)
T 2ifg_A 192 WILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVD 271 (347)
T ss_dssp EEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEEEECCCEESSSEEEEEEEE
T ss_pred EEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCeeeeccCccCceEEEEEEee
Confidence 1122 455521100 0011 22345699999999999
Q ss_pred CCCCCeEEEEeCCeEeeecccccccCCcceEEEEe-----ecceeeEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy12695 171 GSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT-----INSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 171 g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
|.|.|.|.|++++..+...... ...... ....+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 272 g~P~p~i~W~~~g~~l~~~~~~-------~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 344 (347)
T 2ifg_A 272 GQPAPSLRWLFNGSVLNETSFI-------FTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM 344 (347)
T ss_dssp EESCCEEEEEETTEECCCCSSE-------EEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSC
T ss_pred ecCCCcEEEEeCCEECCCCcce-------eeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEec
Confidence 9999999999999876532110 000000 1235679999999999999999999999999999988886
Q ss_pred ec
Q psy12695 246 KV 247 (369)
Q Consensus 246 ~~ 247 (369)
.+
T Consensus 345 ~~ 346 (347)
T 2ifg_A 345 DN 346 (347)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 7
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.79 E-value=3.8e-19 Score=145.56 Aligned_cols=112 Identities=28% Similarity=0.538 Sum_probs=100.9
Q ss_pred CcCCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccc
Q psy12695 31 VFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHIL 107 (369)
Q Consensus 31 ~~~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f 107 (369)
.+.+||..|.|. .+.++|++++|+.+|..++..++.|+|++|+|. +..|.++++|+.|+|++|+|+.+++..|
T Consensus 2 ~~~~CP~~C~C~----~~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~ 77 (174)
T 2r9u_A 2 HSAGCPSQCSCD----QTLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVF 77 (174)
T ss_dssp CCCSSCTTSEEC----SSEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCCCCCCCCEEC----CcEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHh
Confidence 467899999997 468999999999999999999999999999965 6789999999999999999999999999
Q ss_pred ccccccccccccccceecccCCcccccCcCcc-----ccccCCC
Q psy12695 108 DSILELRELKLSGNPIQKITHEAFINVPKLNL-----EDFACSP 146 (369)
Q Consensus 108 ~~l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~-----~~~~c~p 146 (369)
..+++|+.|+|++|.|+.++++.|..+++|.. +.+.|.+
T Consensus 78 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 78 DKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 99999999999999999999988998888654 4455544
No 8
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.78 E-value=3.8e-19 Score=145.00 Aligned_cols=109 Identities=34% Similarity=0.621 Sum_probs=98.0
Q ss_pred CCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccc
Q psy12695 34 ECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSI 110 (369)
Q Consensus 34 ~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l 110 (369)
+||..|.|.+ +.++|++++|+.+|..++..++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++++|.++
T Consensus 2 ~CP~~C~C~~----~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l 77 (170)
T 3g39_A 2 ACPSQCSCSG----TTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKL 77 (170)
T ss_dssp CCC-CCEEET----TEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTC
T ss_pred cCcCcCCcCC----CEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCC
Confidence 7999999984 57999999999999999999999999999965 6789999999999999999999999999999
Q ss_pred cccccccccccceecccCCcccccCcCcc-----ccccCCC
Q psy12695 111 LELRELKLSGNPIQKITHEAFINVPKLNL-----EDFACSP 146 (369)
Q Consensus 111 ~~L~~L~L~~N~l~~~~~~~f~~l~~l~~-----~~~~c~p 146 (369)
++|+.|+|++|+|+.++++.|..+++|.. +.+.|.+
T Consensus 78 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 78 TQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 99999999999999999999998888654 4455543
No 9
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.75 E-value=2.8e-18 Score=142.84 Aligned_cols=107 Identities=24% Similarity=0.400 Sum_probs=96.7
Q ss_pred CCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC--hhhccCCcccCeeeccCCcccccCCcccccc
Q psy12695 33 AECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD--RYTFRKLINLVELDLSYNQIQFVPSHILDSI 110 (369)
Q Consensus 33 ~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~--~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l 110 (369)
..||..|.|.+ +.++|++++++.+|..+|.+++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++.+|.++
T Consensus 2 ~~CP~~C~C~~----~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l 77 (193)
T 2wfh_A 2 SRCPTECTCLD----TVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNM 77 (193)
T ss_dssp --CCTTCEEET----TEEECTTSCCSSCCSCCCTTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCCCCCEeCC----CEEEcCCCCCCcCCCCCCCCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCC
Confidence 47999999984 58999999999999999999999999999976 4689999999999999999999999999999
Q ss_pred cccccccccccceecccCCcccccCcCcccccc
Q psy12695 111 LELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 111 ~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
++|+.|+|++|+|+.++++.|.++++|...++.
T Consensus 78 ~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 78 TQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 999999999999999999999998887665544
No 10
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.73 E-value=7.5e-18 Score=143.35 Aligned_cols=108 Identities=28% Similarity=0.441 Sum_probs=98.8
Q ss_pred cCCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccc
Q psy12695 32 FAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILD 108 (369)
Q Consensus 32 ~~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~ 108 (369)
...||..|.|.+ ..++|++++|+.||..+|..++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+.+.+|.
T Consensus 2 ~~~CP~~C~C~~----~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~ 77 (220)
T 2v9t_B 2 SLHCPAACTCSN----NIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQ 77 (220)
T ss_dssp CCCSCTTSEEET----TEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred CCCCCCCCEECC----CEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhh
Confidence 468999999984 57999999999999999999999999999955 66899999999999999999999999999
Q ss_pred cccccccccccccceecccCCcccccCcCcccccc
Q psy12695 109 SILELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 109 ~l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
++++|+.|+|++|.|+.++.+.|.++++|...++.
T Consensus 78 ~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 78 GLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 99999999999999999999999988887765554
No 11
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=4e-17 Score=135.77 Aligned_cols=106 Identities=29% Similarity=0.548 Sum_probs=96.9
Q ss_pred CCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---h-hhccCCcccCeeeccCCcccccCCccccc
Q psy12695 34 ECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---R-YTFRKLINLVELDLSYNQIQFVPSHILDS 109 (369)
Q Consensus 34 ~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~-~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~ 109 (369)
+||..|.|.+ +.++|++++|+.||..++..++.|+|++|+|. + ..|.++++|+.|+|++|+|+.+++.+|.+
T Consensus 1 ~CP~~C~C~~----~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 76 (192)
T 1w8a_A 1 DCPAMCHCEG----TTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEG 76 (192)
T ss_dssp CCCTTSEEET----TEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTT
T ss_pred CcCCCCEECC----CEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCC
Confidence 5999999995 57999999999999999999999999999976 2 35999999999999999999999999999
Q ss_pred ccccccccccccceecccCCcccccCcCcccccc
Q psy12695 110 ILELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 110 l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
+++|+.|+|++|+|+.+++..|.++++|...++.
T Consensus 77 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 110 (192)
T 1w8a_A 77 ASHIQELQLGENKIKEISNKMFLGLHQLKTLNLY 110 (192)
T ss_dssp CTTCCEEECCSCCCCEECSSSSTTCTTCCEEECC
T ss_pred cccCCEEECCCCcCCccCHHHhcCCCCCCEEECC
Confidence 9999999999999999999999988887766554
No 12
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.69 E-value=4.1e-17 Score=138.73 Aligned_cols=108 Identities=25% Similarity=0.445 Sum_probs=97.0
Q ss_pred cCCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC----hhhccCCcccCeeeccCCcccccCCccc
Q psy12695 32 FAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD----RYTFRKLINLVELDLSYNQIQFVPSHIL 107 (369)
Q Consensus 32 ~~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~----~~~f~~l~~L~~L~Ls~N~l~~i~~~~f 107 (369)
...||..|.|.+ +.++|++++++.||..++..++.|+|++|+|. ..+|.++++|+.|+|++|+|+.+++.+|
T Consensus 2 ~~~CP~~C~C~~----~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~ 77 (220)
T 2v70_A 2 SLACPEKCRCEG----TTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAF 77 (220)
T ss_dssp --CCCTTCEEET----TEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCCCCCCEECC----CEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHh
Confidence 458999999995 47999999999999999999999999999965 3569999999999999999999999999
Q ss_pred ccccccccccccccceecccCCcccccCcCcccccc
Q psy12695 108 DSILELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 108 ~~l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
.++++|+.|+|++|.|+.++++.|.++++|...++.
T Consensus 78 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 78 EGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp TTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 999999999999999999999999988887765554
No 13
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.67 E-value=2.7e-16 Score=117.56 Aligned_cols=96 Identities=23% Similarity=0.434 Sum_probs=79.5
Q ss_pred CCCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 144 CSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 144 c~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
.+|.|...+.++.+.+|+.+.|.|.+.|.|.|.|.|++++..+... .++.+........|.|.+++.+|+|
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~---------~~~~~~~~~~~~~L~I~~v~~~D~G 82 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS---------ERLSFPADGAEHGLLLTAALPTDAG 82 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC---------SSEECCEETTEEEEEESSCCGGGCE
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccce---------eeEEEeecCceEEEEEecCChhhCE
Confidence 3567777788999999999999999999999999999999877532 2333333445668999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecC
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
.|+|.|.|..|..+..+.|.|..+|
T Consensus 83 ~Y~C~a~N~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 83 VYVCRARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEC--
T ss_pred EEEEEEEECCCEEEEEEEEEEEcCC
Confidence 9999999999999999999987653
No 14
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.66 E-value=5.7e-16 Score=114.29 Aligned_cols=95 Identities=24% Similarity=0.529 Sum_probs=79.1
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
+|.|...+.++.+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ..++.+........|.|.+++.+|+|.
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~-------~~~~~~~~~~~~~~L~I~~~~~~D~G~ 77 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQE-------QGRFHIENTDDLTTLIIMDVQKQDGGL 77 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTG-------GGTEEEEECSSEEEEEESSCCGGGCEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeec-------cceeeeecccceEEEEEcCCCccCCEE
Confidence 3566667788999999999999999999999999999998775322 123444444556789999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEee
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~ 246 (369)
|+|.|.|..|..+..+.|.|..
T Consensus 78 Y~C~a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 78 YTLSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEECCCEEEEEEEEEEEE
Confidence 9999999999999999998864
No 15
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=2.1e-16 Score=129.63 Aligned_cols=105 Identities=31% Similarity=0.550 Sum_probs=95.8
Q ss_pred CCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccc
Q psy12695 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSIL 111 (369)
Q Consensus 35 cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~ 111 (369)
||..|.|.+ +.++|++++++.+|..++..++.|+|++|+|. +..|.++++|+.|+|++|+|+.+++..|..++
T Consensus 1 Cp~~C~C~~----~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 76 (177)
T 2o6r_A 1 CPSRCSCSG----TEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLT 76 (177)
T ss_dssp CCTTCEEET----TEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred CcCCCEeCC----CEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCC
Confidence 999999985 47999999999999999999999999999965 56789999999999999999999999999999
Q ss_pred ccccccccccceecccCCcccccCcCcccccc
Q psy12695 112 ELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 112 ~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
+|+.|+|++|.|+.+++..|..+++|...++.
T Consensus 77 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 108 (177)
T 2o6r_A 77 KLTILYLHENKLQSLPNGVFDKLTQLKELALD 108 (177)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred ccCEEECCCCCccccCHHHhhCCcccCEEECc
Confidence 99999999999999999888888887665543
No 16
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.64 E-value=2.2e-16 Score=155.15 Aligned_cols=110 Identities=34% Similarity=0.398 Sum_probs=92.4
Q ss_pred cCcCCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcc
Q psy12695 30 QVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHI 106 (369)
Q Consensus 30 ~~~~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~ 106 (369)
...+.|+..|.|... ..+++|++.+|++||.++|.++++|+|++|+|. +.+|.++++|+.|||++|+|+.|++++
T Consensus 18 ~~~p~~~~~c~~~~~--~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~ 95 (635)
T 4g8a_A 18 SSIPESWEPCVEVVP--NITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGA 95 (635)
T ss_dssp -------CCSEEEET--TTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTT
T ss_pred CCCCCCCCCccccCC--CCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhH
Confidence 334455566887754 468999999999999999999999999999954 689999999999999999999999999
Q ss_pred cccccccccccccccceecccCCcccccCcCcccc
Q psy12695 107 LDSILELRELKLSGNPIQKITHEAFINVPKLNLED 141 (369)
Q Consensus 107 f~~l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~ 141 (369)
|.+|++|++|+|++|+|+.+++++|.++.+|...+
T Consensus 96 f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 96 YQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred hcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 99999999999999999999999999888765433
No 17
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.63 E-value=3.6e-16 Score=142.57 Aligned_cols=106 Identities=24% Similarity=0.425 Sum_probs=93.1
Q ss_pred CCCCC-CeecccCCceEEEecCCCCCccCCCCCCCccEEEeeccee---ChhhccCCcccCeeeccCCcc-cccCCcccc
Q psy12695 34 ECPST-CECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFL---DRYTFRKLINLVELDLSYNQI-QFVPSHILD 108 (369)
Q Consensus 34 ~cp~~-C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i---~~~~f~~l~~L~~L~Ls~N~l-~~i~~~~f~ 108 (369)
+||++ |.|.+ ++|+|++++|++||.++|.+++.|+|++|+| .+++|.+|++|++|+|++|+| +.|+.++|.
T Consensus 1 gCp~~~C~C~~----~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~ 76 (350)
T 4ay9_X 1 GCHHRICHCSN----RVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFS 76 (350)
T ss_dssp -CCCSSSEEET----TEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBC
T ss_pred CCCCCccEeeC----CEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhh
Confidence 59976 99984 5799999999999999999999999999995 478999999999999999997 558999999
Q ss_pred ccccccc-ccccccceecccCCcccccCcCcccccc
Q psy12695 109 SILELRE-LKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 109 ~l~~L~~-L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
++++|.. +.+++|+|+.+++++|..+++|...++.
T Consensus 77 ~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~ 112 (350)
T 4ay9_X 77 NLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLIS 112 (350)
T ss_dssp SCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEE
T ss_pred cchhhhhhhcccCCcccccCchhhhhcccccccccc
Confidence 9998775 6678899999999999999987765443
No 18
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.62 E-value=9.7e-16 Score=129.05 Aligned_cols=105 Identities=30% Similarity=0.511 Sum_probs=96.3
Q ss_pred CCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccc
Q psy12695 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSIL 111 (369)
Q Consensus 35 cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~ 111 (369)
||..|.|.| +.++|.+++++.+|..++..++.|+|++|+|. +..|.++++|++|+|++|+|+.+++..|..++
T Consensus 1 Cp~~C~C~~----~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 76 (208)
T 2o6s_A 1 CPSRCSCSG----TTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLT 76 (208)
T ss_dssp CCTTCEEET----TEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred CcCCCEECC----CEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCC
Confidence 999999986 47999999999999999999999999999965 56799999999999999999999999999999
Q ss_pred ccccccccccceecccCCcccccCcCcccccc
Q psy12695 112 ELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 112 ~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
+|+.|+|++|.|+.+++..|..+++|...++.
T Consensus 77 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 77 SLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 99999999999999999888888887766554
No 19
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=2.5e-14 Score=108.12 Aligned_cols=99 Identities=23% Similarity=0.311 Sum_probs=82.1
Q ss_pred CCCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 144 CSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 144 c~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
.+|.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+........|.|.+++.+|+|
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~---------~~~~~~~~~~~~~L~I~~v~~~D~G 76 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQES---------EHMKVENSENGSKLTILAARQEHCG 76 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCS---------SSEEEEECSSEEEEEETTCCTTTCE
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCC---------CCEEEEEcCCEEEEEECCCChhcCE
Confidence 4577777888999999999999999999999999999998766421 1333333344678999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecCCcc
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKVETAV 251 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~~~~~ 251 (369)
.|+|.|.|..|.....+.|.|...+...
T Consensus 77 ~Y~C~a~N~~g~~~~~~~l~V~~~p~~P 104 (114)
T 2cqv_A 77 CYTLLVENKLGSRQAQVNLTVVDKPDPP 104 (114)
T ss_dssp EEEEEEECSSCEEECCEEEEEECSCSCC
T ss_pred EEEEEEEECCCcEEEEEEEEEECCCCCC
Confidence 9999999999999999999998766543
No 20
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.57 E-value=2.4e-14 Score=106.07 Aligned_cols=97 Identities=18% Similarity=0.249 Sum_probs=80.3
Q ss_pred ccCCCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCC
Q psy12695 142 FACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 142 ~~c~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 221 (369)
+...|.+...+.++.+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+........|.|.+++.+|
T Consensus 5 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~---------~~~~~~~~~~~~~L~i~~~~~~D 75 (103)
T 3qp3_A 5 LDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQES---------SKIHYTNTSGVLTLEILDCHTDD 75 (103)
T ss_dssp TCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCC---------SSEEEEEETTEEEEEECSCCGGG
T ss_pred CCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCC---------CCEEEEECCCEEEEEEcCCCccc
Confidence 345667777788899999999999999999999999999999776532 13333344456689999999999
Q ss_pred CEEEEEEEEeCCceEEEEEEEEEeec
Q psy12695 222 SGIYTCRAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 222 ~G~Y~C~a~n~~g~~~~~~~l~v~~~ 247 (369)
+|.|.|.|.|..|.....+.|.|...
T Consensus 76 ~G~Y~C~a~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 76 SGTYRAVCTNYKGEASDYATLDVTGG 101 (103)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CEEEEEEEEeCCCcEEEEEEEEEECC
Confidence 99999999999999999999988754
No 21
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.55 E-value=1.1e-14 Score=124.47 Aligned_cols=106 Identities=32% Similarity=0.520 Sum_probs=96.4
Q ss_pred CCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccc
Q psy12695 34 ECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSI 110 (369)
Q Consensus 34 ~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l 110 (369)
..-..|.|+| +.|+|++++++.+|..+|.+++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++..|.++
T Consensus 12 ~~~~~~~Cs~----~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 87 (229)
T 3e6j_A 12 ACPSQCSCSG----TTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSL 87 (229)
T ss_dssp CCCTTCEEET----TEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred cCCCCCEEeC----CEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccC
Confidence 3456799995 46999999999999999999999999999965 6789999999999999999999999999999
Q ss_pred cccccccccccceecccCCcccccCcCcccccc
Q psy12695 111 LELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 111 ~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
++|+.|+|++|.|+.+++..|..+++|...++.
T Consensus 88 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls 120 (229)
T 3e6j_A 88 TQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMC 120 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcCEEECCCCcCCccChhHhCcchhhCeEecc
Confidence 999999999999999999999988888776654
No 22
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.55 E-value=1e-14 Score=128.90 Aligned_cols=109 Identities=23% Similarity=0.387 Sum_probs=96.7
Q ss_pred CCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccc
Q psy12695 34 ECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSI 110 (369)
Q Consensus 34 ~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l 110 (369)
.||..|.|.... .+.++|++++++.+|..+|..++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+.+.+|..+
T Consensus 1 ~CP~~C~C~~~~-~~~~~c~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 79 (285)
T 1ozn_A 1 PCPGACVCYNEP-KVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGL 79 (285)
T ss_dssp CCCTTCEEECSS-SCEEECCSSCCSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CcCCCceECCCC-CeEEEcCcCCcccCCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCc
Confidence 599999997542 478999999999999999999999999999965 5679999999999999999999999999999
Q ss_pred cccccccccccc-eecccCCcccccCcCcccccc
Q psy12695 111 LELRELKLSGNP-IQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 111 ~~L~~L~L~~N~-l~~~~~~~f~~l~~l~~~~~~ 143 (369)
++|+.|+|++|. +..+.+..|..+++|...++.
T Consensus 80 ~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~ 113 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLD 113 (285)
T ss_dssp TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECT
T ss_pred cCCCEEeCCCCCCccccCHHHhcCCcCCCEEECC
Confidence 999999999997 999988888888887665543
No 23
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=5.5e-14 Score=103.25 Aligned_cols=93 Identities=26% Similarity=0.291 Sum_probs=75.6
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+.... .............|.|.+++.+|+|.|
T Consensus 6 P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~--------~~~~~~~~~~~~~L~i~~v~~~D~G~Y 77 (99)
T 1g1c_A 6 PKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSD--------RIYWYWPEDNVCELVIRDVTGEDSASI 77 (99)
T ss_dssp EEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS--------SEEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCC--------CEEEEEcCCCEEEEEECCCCcCCCEEE
Confidence 455566788899999999999999999999999999998765311 122222234566899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEee
Q psy12695 226 TCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~ 246 (369)
+|.|.|..|.....+.|.|..
T Consensus 78 ~C~a~N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 78 MVKAINIAGETSSHAFLLVQA 98 (99)
T ss_dssp EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEECCCcEEEEEEEEEec
Confidence 999999999999998888864
No 24
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.54 E-value=7.3e-15 Score=126.44 Aligned_cols=107 Identities=23% Similarity=0.398 Sum_probs=94.5
Q ss_pred CCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCc-ccccCCcccc
Q psy12695 33 AECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQ-IQFVPSHILD 108 (369)
Q Consensus 33 ~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~-l~~i~~~~f~ 108 (369)
+.||..|.|... ....|+|.+ ++.+|. +|..++.|+|++|+|. +.+|.++++|+.|+|++|+ |+.+++.+|.
T Consensus 2 ~~cp~~C~C~~~-~~~~v~c~~--l~~ip~-~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~ 77 (239)
T 2xwt_C 2 GCSSPPCECHQE-EDFRVTCKD--IQRIPS-LPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFY 77 (239)
T ss_dssp -CCSSSCSEEEC-STTEEEECS--CSSCCC-CCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEE
T ss_pred CCCCCCCeeCCC-CcceeEccC--ccccCC-CCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcC
Confidence 479999999851 135788977 999999 9999999999999954 6789999999999999997 9999999999
Q ss_pred cccccccccccc-cceecccCCcccccCcCcccccc
Q psy12695 109 SILELRELKLSG-NPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 109 ~l~~L~~L~L~~-N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
++++|+.|+|++ |.|+.++++.|.++++|...++.
T Consensus 78 ~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~ 113 (239)
T 2xwt_C 78 NLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIF 113 (239)
T ss_dssp SCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEE
T ss_pred CCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCC
Confidence 999999999998 99999999999998887765543
No 25
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.54 E-value=5.8e-14 Score=103.32 Aligned_cols=95 Identities=24% Similarity=0.496 Sum_probs=76.3
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
+|.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+...... . ......+...|.|.+++.+|+|.
T Consensus 5 ~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~-------~-~~~~~~~~~~L~i~~v~~~D~G~ 76 (100)
T 2kdg_A 5 PPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLH-------K-MIVSEKGLHSLIFEVVRASDAGA 76 (100)
T ss_dssp EEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSS-------C-EEEETTTEEEEEESSCCGGGCEE
T ss_pred CCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcE-------E-EEEcCCCeEEEEECCCCcccCEE
Confidence 355666778899999999999999999999999999999876542211 1 11122334589999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeec
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~ 247 (369)
|+|.|.|..|.....+.|.|...
T Consensus 77 Y~C~a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 77 YACVAKNRAGEATFTVQLDVLAK 99 (100)
T ss_dssp EEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEEEcCCCeEEEEEEEEEEec
Confidence 99999999999999999988754
No 26
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.54 E-value=3.2e-14 Score=103.33 Aligned_cols=88 Identities=20% Similarity=0.324 Sum_probs=71.9
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--eEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--KIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
|.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++ ..+... ...........|.|.+++.+|+|
T Consensus 3 P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~-----------~~~~~~~~~~~L~i~~~~~~D~G 71 (93)
T 1wit_A 3 PKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE-----------LLVDAKSSTTSIFFPSAKRADSG 71 (93)
T ss_dssp CEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT-----------SEEEEETTEEEEECTTBCGGGCE
T ss_pred CeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc-----------EEEEecCCEEEEEECCCChhcCE
Confidence 55666677889999999999999999999999999998 554311 11122344578999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEE
Q psy12695 224 IYTCRAKNGAGEVFTNISLNV 244 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v 244 (369)
.|+|.|.|..|.....+.|.|
T Consensus 72 ~Y~C~a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 72 NYKLKVKNELGEDEAIFEVIV 92 (93)
T ss_dssp EEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEcCCCeEEEEEEEEE
Confidence 999999999999988888876
No 27
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.53 E-value=5.9e-14 Score=103.07 Aligned_cols=93 Identities=27% Similarity=0.476 Sum_probs=75.4
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ..++..........|.|.+++.+|+|.|
T Consensus 6 P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~--------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 77 (99)
T 1u2h_A 6 PTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPD--------QRRFAEEAEGGLCRLRILAAERGDAGFY 77 (99)
T ss_dssp EEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCB--------TTEEEEECGGGEEEEEESSCCGGGCEEE
T ss_pred CEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCC--------CCEEEEECCCCEEEEEEccCCcCCCEEE
Confidence 45556677889999999999999999999999999999766431 1233333333445799999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEee
Q psy12695 226 TCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~ 246 (369)
+|.|.|..|.....+.|.|..
T Consensus 78 ~C~a~N~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 78 TCKAVNEYGARQCEARLEVRG 98 (99)
T ss_dssp EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEECCCceeEEEEEEEEC
Confidence 999999999999998888864
No 28
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.53 E-value=8.9e-15 Score=133.47 Aligned_cols=111 Identities=22% Similarity=0.319 Sum_probs=92.5
Q ss_pred cCcCCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcc
Q psy12695 30 QVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHI 106 (369)
Q Consensus 30 ~~~~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~ 106 (369)
.....|+..|.|.+.. .++|++++++.+|..++..++.|+|++|+|. ..+|.++++|+.|+|++|+|+.+++.+
T Consensus 19 ~~~~~~~~~~~C~~~~---~c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 95 (353)
T 2z80_A 19 KEESSNQASLSCDRNG---ICKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDS 95 (353)
T ss_dssp --------CCEECTTS---EEECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTT
T ss_pred CccCCCccCCCCCCCe---EeeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhh
Confidence 3455688899999753 5899999999999999999999999999965 568999999999999999999999999
Q ss_pred cccccccccccccccceecccCCcccccCcCcccccc
Q psy12695 107 LDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 107 f~~l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
|.++++|+.|+|++|.|+.++...|.++++|...++.
T Consensus 96 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 96 FSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp TTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECT
T ss_pred cCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECC
Confidence 9999999999999999999998888888887665543
No 29
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.53 E-value=7.8e-15 Score=127.26 Aligned_cols=108 Identities=30% Similarity=0.524 Sum_probs=96.7
Q ss_pred CCCCC--CeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccc
Q psy12695 34 ECPST--CECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILD 108 (369)
Q Consensus 34 ~cp~~--C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~ 108 (369)
+||.. |.|... .+.++|++++++.+|..+|..++.|+|++|+|. +.+|.++++|++|+|++|+|+.+++.+|.
T Consensus 3 ~Cp~~~gC~C~~~--~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 80 (251)
T 3m19_A 3 TCETVTGCTCNEG--KKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFD 80 (251)
T ss_dssp -CHHHHSSEEEGG--GTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTT
T ss_pred cCCCCCceEcCCC--CeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhc
Confidence 68877 999532 468999999999999999999999999999965 66899999999999999999999999999
Q ss_pred cccccccccccccceecccCCcccccCcCcccccc
Q psy12695 109 SILELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 109 ~l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
++++|+.|+|++|.|+.+++..|..+++|...++.
T Consensus 81 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 99999999999999999999999988887766554
No 30
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.52 E-value=2.3e-13 Score=103.11 Aligned_cols=97 Identities=25% Similarity=0.324 Sum_probs=79.3
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeec-ceeeEEEcccCCCCCE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTIN-SLSNLTIVAVTMSDSG 223 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~I~~v~~~D~G 223 (369)
.|.+...+.++.+.+|+.+.|.|.+.|.|.|.+.|++++..+... ..++.+.... +...|.|.+++.+|+|
T Consensus 15 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~--------~~~~~~~~~~~~~~~L~I~~v~~~D~G 86 (116)
T 2kkq_A 15 APMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFN--------TDRISLYQDNTGRVTLLIKDVNKKDAG 86 (116)
T ss_dssp CCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCC--------BTTEEEEECTTCEEEEEEEEECGGGCE
T ss_pred CCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCC--------CCeEEEEeCCCCeEEEEECCCCcccCE
Confidence 577888889999999999999999999999999999999776431 1223222221 2348999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|+|.|.|..|.....+.|.|...+.
T Consensus 87 ~Y~C~a~N~~G~~~~~~~l~V~~~p~ 112 (116)
T 2kkq_A 87 WYTVSAVNEAGVTTCNTRLDVTARPN 112 (116)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCSC
T ss_pred EEEEEEEcCCCeEEEEEEEEEeCCCC
Confidence 99999999999999999999987654
No 31
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.51 E-value=1.5e-13 Score=100.82 Aligned_cols=93 Identities=30% Similarity=0.428 Sum_probs=76.4
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+.++.+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..++.+........|.|.+++.+|+|.
T Consensus 6 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~---------~~~~~~~~~~~~~~L~i~~~~~~d~G~ 76 (99)
T 3puc_A 6 KPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQ---------GGKYKLSEDKGGFFLEIHKTDTSDSGL 76 (99)
T ss_dssp EEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCS---------SSSEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcC---------CCCEEEEEeCCEEEEEECCCCcccCEE
Confidence 35566667888999999999999999999999999999876642 123444444455689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEee
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~ 246 (369)
|.|.|.|..|.....+.|.|..
T Consensus 77 Y~C~a~n~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 77 YTCTVKNSAGSVSSSCKLTIKA 98 (99)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEeCCCcEeEEEEEEEEe
Confidence 9999999999999888888763
No 32
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.50 E-value=9.8e-14 Score=103.45 Aligned_cols=97 Identities=23% Similarity=0.424 Sum_probs=77.9
Q ss_pred ccCCCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCC
Q psy12695 142 FACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 142 ~~c~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 221 (369)
+...|.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+........|.|.+++.+|
T Consensus 10 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~---------~~~~~~~~~~~~~L~i~~~~~~D 80 (107)
T 3irg_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS---------ERLSFPADGAEHGLLLTAALPTD 80 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC---------SSEECCEETTEEEEEESSCCGGG
T ss_pred CCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCC---------CcEEEEeCCCEEEEEEccCCHHh
Confidence 334566777778899999999999999999999999999998766431 12222233344589999999999
Q ss_pred CEEEEEEEEeCCceEEEEEEEEEeec
Q psy12695 222 SGIYTCRAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 222 ~G~Y~C~a~n~~g~~~~~~~l~v~~~ 247 (369)
+|.|.|.|.|..|.....+.|.|..+
T Consensus 81 ~G~Y~C~a~n~~g~~~~~~~l~V~~~ 106 (107)
T 3irg_B 81 AGVYVCRARNAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEC-
T ss_pred CEEEEEEEEcCCCcEEEEEEEEEEcC
Confidence 99999999999999999999988764
No 33
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.50 E-value=1.1e-13 Score=103.51 Aligned_cols=94 Identities=18% Similarity=0.211 Sum_probs=71.4
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCC---CeEEEEeCCeEeeecccccccCCcceEEEEe--e----cceeeEEEcc
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPV---PKIKWIFKEKIIANISSGLANMNKRQYIIKT--I----NSLSNLTIVA 216 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~---p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~L~I~~ 216 (369)
|.+...|..+.+.+|+.++|.|.+.|.|. |.|.|++++....... ...++.+.. . ...+.|.|.+
T Consensus 5 p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~L~I~~ 78 (108)
T 3cx2_A 5 GLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSK------VGQHLQLHDSYDRASKVYLFELHITD 78 (108)
T ss_dssp CSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGG------CBTTEEEEEEEETTTTEEEEEEEECS
T ss_pred cEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCccccccc------CCceEEEeeEEecccccceEEEEEec
Confidence 56677788999999999999999999998 9999999763221110 011222211 0 1246899999
Q ss_pred cCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy12695 217 VTMSDSGIYTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 217 v~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
++.+|+|.|+|.|.|..|..++.+.|.|.
T Consensus 79 v~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 79 AQPAFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCCccCEEEEEEEecCCCceEEEEEEEEe
Confidence 99999999999999999999999999885
No 34
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.50 E-value=1.8e-13 Score=100.54 Aligned_cols=94 Identities=24% Similarity=0.533 Sum_probs=76.3
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ..++.+........|.|.+++.+|+|.|
T Consensus 6 P~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~-------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 78 (100)
T 3irg_A 6 PKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQE-------QGRFHIENTDDLTTLIIMDVQKQDGGLY 78 (100)
T ss_dssp EEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTG-------GGTEEEEECSSEEEEEESSCCGGGCEEE
T ss_pred CeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCC-------CCEEEEEecCCEEEEEEeecCcccCEEE
Confidence 455566778899999999999999999999999999987764221 2234444444557899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEee
Q psy12695 226 TCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~ 246 (369)
+|.|.|..|.....+.|.|..
T Consensus 79 ~C~a~n~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 79 TLSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEeCCCcEEEEEEEEEEe
Confidence 999999999998888888753
No 35
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.2e-13 Score=102.19 Aligned_cols=97 Identities=30% Similarity=0.406 Sum_probs=78.5
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEee-cceeeEEEcccCCCCCE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTI-NSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G 223 (369)
.|.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+... ..++.+... .+...|.|.+++.+|+|
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~--------~~~~~~~~~~~~~~~L~i~~v~~~D~G 79 (110)
T 2dm2_A 8 APFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPK--------SDHYTIQRDLDGTCSLHTTASTLDDDG 79 (110)
T ss_dssp CCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTT--------CSSEEEEECTTCEEEEEESSCCTTTCS
T ss_pred CCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCC--------CCeEEEEECCCcEEEEEECCCChhhCE
Confidence 567777788899999999999999999999999999988765421 123333222 23347999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|+|.|.|..|.....+.|.|...+.
T Consensus 80 ~Y~C~a~N~~g~~~~~~~l~V~~~~~ 105 (110)
T 2dm2_A 80 NYTIMAANPQGRISCTGRLMVQAVNS 105 (110)
T ss_dssp CCEEEEECTTCCEEECCCEEEECCSC
T ss_pred EEEEEEEECCCeEEEEEEEEEECCCC
Confidence 99999999999999999999987654
No 36
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.49 E-value=5.7e-13 Score=97.42 Aligned_cols=89 Identities=22% Similarity=0.368 Sum_probs=73.6
Q ss_pred cCCCCCeeeccCCeEEEEEEeeCC-CCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEE
Q psy12695 149 RPITPDVTAEENENVTLSCRATGS-PVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTC 227 (369)
Q Consensus 149 ~~~~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 227 (369)
...+.++.+.+|+.+.|.|.+.|. |.|.+.|++++..+.. ..++.+....+...|.|.+++.+|+|.|.|
T Consensus 5 ~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~---------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 75 (97)
T 2bk8_A 5 SGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLEN---------SEKYEITYEDGVAILYVKDITKLDDGTYRC 75 (97)
T ss_dssp ECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCS---------SSSEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred eccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcC---------CCCEEEEEcCCeEEEEEecCChhhCeEEEE
Confidence 345678999999999999999997 9999999999876642 123333334455689999999999999999
Q ss_pred EEEeCCceEEEEEEEEEee
Q psy12695 228 RAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 228 ~a~n~~g~~~~~~~l~v~~ 246 (369)
.|.|..|.....+.|.|..
T Consensus 76 ~a~n~~g~~~~~~~l~V~~ 94 (97)
T 2bk8_A 76 KVVNDYGEDSSYAELFVKG 94 (97)
T ss_dssp EEECSSCEEEEEEEEEETT
T ss_pred EEECCCCeEeEEEEEEEEe
Confidence 9999999999988888864
No 37
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=1.5e-13 Score=107.36 Aligned_cols=94 Identities=21% Similarity=0.307 Sum_probs=70.5
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEee------------------eccc--ccccCCcceEEEEeecceee
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIA------------------NISS--GLANMNKRQYIIKTINSLSN 211 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~------------------~~~~--~~~~~~~~~~~~~~~~~~~~ 211 (369)
+.++++.+|+.++|.|.+.|.|.|.|.|++++.... .... ........++.+......+.
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 678899999999999999999999999999882100 0000 00001222334444444578
Q ss_pred EEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy12695 212 LTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 212 L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999999999999999999999999888875
No 38
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=4.4e-13 Score=101.88 Aligned_cols=94 Identities=18% Similarity=0.267 Sum_probs=75.3
Q ss_pred CCCccC---CCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCC
Q psy12695 145 SPNIRP---ITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 145 ~p~i~~---~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 221 (369)
.|.+.. .+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+.. .++.+........|.|.+++.+|
T Consensus 21 ~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~----------~~~~~~~~~~~~~L~i~~~~~~D 90 (118)
T 2e7c_A 21 PPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDT----------SRVHVRTSDFDTVFFVRQAARSD 90 (118)
T ss_dssp EEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCC----------SSCEEEECSSEEEEEESSCCTTT
T ss_pred CCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCC----------CcEEEEECCCeEEEEECCCChhc
Confidence 455532 34678899999999999999999999999999977641 11222233445679999999999
Q ss_pred CEEEEEEEEeCCceEEEEEEEEEeecC
Q psy12695 222 SGIYTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 222 ~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
+|.|+|.|.|..|.....+.|.|...|
T Consensus 91 ~G~Y~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 91 SGEYELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp CEEEEEEEECSSCEECCEEEEEEECCC
T ss_pred CEEEEEEEEeCCCeEEEEEEEEEEcCC
Confidence 999999999999999999999987654
No 39
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.46 E-value=1.3e-13 Score=120.86 Aligned_cols=105 Identities=29% Similarity=0.464 Sum_probs=93.9
Q ss_pred CCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccc
Q psy12695 37 STCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILEL 113 (369)
Q Consensus 37 ~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L 113 (369)
..|.|... .+.++|++++|+.+|..+|.+++.|+|++|+|. +.+|.++++|++|+|++|+|+.+++..|..+++|
T Consensus 10 ~~C~c~~~--~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L 87 (270)
T 2o6q_A 10 GVCSCNNN--KNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNL 87 (270)
T ss_dssp CSBEEETT--TTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTC
T ss_pred CCCEeCCC--CCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCC
Confidence 46899742 468999999999999999999999999999965 5689999999999999999999999999999999
Q ss_pred ccccccccceecccCCcccccCcCcccccc
Q psy12695 114 RELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 114 ~~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
+.|+|++|.|+.++...|..+++|...++.
T Consensus 88 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 88 ETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp CEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 999999999999999999888887665543
No 40
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.45 E-value=6.1e-14 Score=104.52 Aligned_cols=92 Identities=25% Similarity=0.461 Sum_probs=75.9
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..++.+......+.|.|.+++.+|+|.
T Consensus 14 ~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~---------~~~~~~~~~~~~~~L~I~~v~~~D~G~ 84 (106)
T 1nct_A 14 AARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLST---------SARHQVTTTKYKSTFEISSVQASDEGN 84 (106)
T ss_dssp CCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTT---------CSSEEEEECSSEEEEEECCCCSSCCSE
T ss_pred CCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCC---------CCCEEEEECCCEEEEEECcCCchhCEE
Confidence 46677778899999999999999999999999999998865532 123333334446789999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEe
Q psy12695 225 YTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
|+|.|.|..|.....+.|.|.
T Consensus 85 Y~C~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 85 YSVVVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp EEECCBCSSCBCCEEEEEEEC
T ss_pred EEEEEEeCCCeEEEEEEEEEE
Confidence 999999999998888888774
No 41
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.45 E-value=8.4e-13 Score=98.35 Aligned_cols=102 Identities=21% Similarity=0.278 Sum_probs=75.0
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEE-eecceeeEEEcccCCCCCE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK-TINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D~G 223 (369)
.|.+...+.++.+.+|++++|.|.+.+.|.+.+.|++++............ ...++.+. .......|.|.+++.+|+|
T Consensus 6 ~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~L~I~~v~~~D~G 84 (108)
T 3m45_A 6 SQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKAL-RDNRIELVRASWHELSISVSDVSLSDEG 84 (108)
T ss_dssp --CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECS-CCTTEEEEEESSSEEEEEECSCCGGGCE
T ss_pred CCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCccc-ccCcEEEeecCCCcEEEEECCCChhHCe
Confidence 456666788999999999999999999999999999987622211111111 11233322 2234678999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecC
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
.|.|.+.| .|.....+.|.|..+|
T Consensus 85 ~Y~C~~~n-~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 85 QYTCSLFT-MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp EEEEEECS-SSCEEEEEEEEEECCC
T ss_pred EEEEEEEc-CCCcEEEEEEEEEcCC
Confidence 99999999 8888889999887653
No 42
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=3.6e-13 Score=99.12 Aligned_cols=91 Identities=18% Similarity=0.180 Sum_probs=72.3
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+.++.+.+|+.+.|.|.+ .|.|.+.|++++..+... .++.+........|.|.+++.+|+|.
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~---------~r~~i~~~~~~~~L~I~~v~~~D~G~ 75 (100)
T 2yuz_A 7 GLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQES---------DRLKVVQKGRIHKLVIANALTEDEGD 75 (100)
T ss_dssp CCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCC---------SSEEEEECSSEEEEEESSCCGGGCSE
T ss_pred CCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCC---------CcEEEEEeCCEEEEEECCCChhhCEE
Confidence 4566777889999999999999999 788999999999876531 23333333445689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecC
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
|+|.|.|. ..+..+.|.|..+|
T Consensus 76 Y~C~a~N~--~~~~~a~L~V~~~P 97 (100)
T 2yuz_A 76 YVFAPDAY--NVTLPAKVHVISGP 97 (100)
T ss_dssp EEEEESSS--CCCEEEEEEEECCS
T ss_pred EEEEEcCC--CeeEEEEEEEeCCC
Confidence 99999998 44566778887665
No 43
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=2.8e-13 Score=99.68 Aligned_cols=92 Identities=28% Similarity=0.460 Sum_probs=74.6
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+.... .++.. ...+.|.|.+++.+|+|.
T Consensus 8 ~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~--------~~~~~---~~~~~L~i~~v~~~d~G~ 76 (100)
T 2edj_A 8 PPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRD--------PRATI---QEQGTLQIKNLRISDTGT 76 (100)
T ss_dssp SCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSC--------SSCEE---CTTCCEEEESCCTTTCCE
T ss_pred CCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCC--------CCEEE---cCCCEEEEccCCcccCEE
Confidence 4556667788899999999999999999999999999987664211 11111 234579999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeec
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~ 247 (369)
|+|.|.|..|.....+.|.|..+
T Consensus 77 Y~C~a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 77 YTCVATSSSGETSWSAVLDVTES 99 (100)
T ss_dssp EEEEEECSSCCCBCCEEEEEESC
T ss_pred EEEEEEcCCCCEEEEEEEEEecC
Confidence 99999999999888888888764
No 44
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=1.9e-13 Score=100.43 Aligned_cols=88 Identities=27% Similarity=0.539 Sum_probs=72.0
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
+|.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+.... . ........|.|.+++.+|+|.
T Consensus 11 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~---------~---~~~~~~~~L~i~~v~~~D~G~ 78 (99)
T 2yr3_A 11 APSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYAR---------S---TCEAGVAELHIQDALPEDHGT 78 (99)
T ss_dssp EEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCC---------C---EEETTEEEEEECSCCTTCCBC
T ss_pred CCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccc---------e---EeeCCeEEEEECCCChhhCEE
Confidence 4556666788899999999999999999999999999887654211 1 112345789999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEE
Q psy12695 225 YTCRAKNGAGEVFTNISLNV 244 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v 244 (369)
|.|.|.|..|.....+.|.|
T Consensus 79 Y~C~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 79 YTCLAENALGQVSCSAWVTV 98 (99)
T ss_dssp EEEEEECSSCEEEEECCEEE
T ss_pred EEEEEEECCCeEEEEEEEEE
Confidence 99999999999888887776
No 45
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.44 E-value=4.3e-13 Score=100.10 Aligned_cols=94 Identities=27% Similarity=0.423 Sum_probs=67.8
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++. .....+.|.|.+++.+|+|.
T Consensus 10 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~---------~~~--~~~~~~~L~i~~v~~~D~G~ 78 (108)
T 3kvq_A 10 APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDS---------GIV--LKDGNRNLTIRRVRKEDEGL 78 (108)
T ss_dssp -CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBT---------TEE--EETTTTEEEECSCCGGGCEE
T ss_pred CCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCC---------CeE--EeCCCcEEEEeecCcccCEE
Confidence 4677777888999999999999999999999999999987654311 111 12345689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
|.|.|.|..|.....+.|.|...+.
T Consensus 79 Y~C~a~n~~g~~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 79 YTCQACSVLGCAKVEAFFIIEGAQE 103 (108)
T ss_dssp EEEEEC----CEEEEEEEEEEC---
T ss_pred EEEEEEeCCCceEEEEEEEEeCCCc
Confidence 9999999999999999999987653
No 46
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.44 E-value=7.6e-13 Score=96.37 Aligned_cols=86 Identities=19% Similarity=0.310 Sum_probs=70.5
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
+|.+...+..+.+.+|+.+.|.|.+.|.| |.+.|++++..+... .++.. ..+.|.|.+++.+|+|.
T Consensus 9 pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~---------~~~~~----~~~~L~i~~~~~~D~G~ 74 (95)
T 2ckn_A 9 PWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVES---------NRTRI----TGEEVEVRDSIPADSGL 74 (95)
T ss_dssp SCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCC---------SSEEE----CSSEEEESSCCGGGSEE
T ss_pred CCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCC---------CCEEE----eCCEEEECCCChHHCEE
Confidence 45666677889999999999999999998 899999988765421 12222 15689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEE
Q psy12695 225 YTCRAKNGAGEVFTNISLNV 244 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v 244 (369)
|.|.|.|..|.....+.|.|
T Consensus 75 Y~C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 75 YACVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp EEEEEEETTEEEEEEEEEEE
T ss_pred EEEEeccCCCcEEEEEEEEE
Confidence 99999999999888888876
No 47
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=1.1e-13 Score=103.82 Aligned_cols=97 Identities=30% Similarity=0.504 Sum_probs=78.0
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+..+.+.+|+.++|.|.+.|.|.|.+.|++++..+.... .............|.|.+++.+|+|.
T Consensus 9 ~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~--------~~~~~~~~~~~~~L~i~~v~~~D~G~ 80 (110)
T 2dm3_A 9 RPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDS--------AHKMLVRENGVHSLIIEPVTSRDAGI 80 (110)
T ss_dssp CCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCS--------SEEEEECTTSCEEEEESSCCGGGCSB
T ss_pred CCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCC--------ceEEEEecCCeEEEEEeeCCcccCEE
Confidence 5667777888999999999999999999999999999887654211 11112222234689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
|+|.|.|..|.....+.|.|...+.
T Consensus 81 Y~C~a~n~~g~~~~~~~l~V~~~p~ 105 (110)
T 2dm3_A 81 YTCIATNRAGQNSFSLELVVAAKES 105 (110)
T ss_dssp BCEEEECSSCEEEECCEEEEECCCC
T ss_pred EEEEEECCCCEEEEEEEEEEeCCCC
Confidence 9999999999999999999987654
No 48
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.44 E-value=3.9e-13 Score=102.37 Aligned_cols=95 Identities=15% Similarity=0.159 Sum_probs=71.8
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCC---CCCeEEEEeCCeEeeecccccccCCcceEEEEee------cceeeEEEcc
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGS---PVPKIKWIFKEKIIANISSGLANMNKRQYIIKTI------NSLSNLTIVA 216 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~---p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~L~I~~ 216 (369)
|.+...|.++.+.+|+.++|.|.+.|. |.|.|.|+|+......... ..++.+... .....|.|.+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~------~~~~~~~~~~~~~~~~~~~~L~I~~ 81 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKA------GKHLQLKETFERHSRVYTFEMQIIK 81 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHT------TSSEEEEEEEETTTTEEEEEEEECS
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCC------CceEEEccccccccccceEEEEEcc
Confidence 446667899999999999999999875 8999999996421110000 011222110 0247899999
Q ss_pred cCCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy12695 217 VTMSDSGIYTCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 217 v~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 246 (369)
+..+|+|.|+|.|.|..|..++.+.|.|..
T Consensus 82 v~~~DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 82 AKDNFAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp CCTTSCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred CCcccCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999999999999999999998
No 49
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.43 E-value=2.4e-13 Score=122.70 Aligned_cols=106 Identities=25% Similarity=0.452 Sum_probs=93.5
Q ss_pred cCcCCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcc
Q psy12695 30 QVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHI 106 (369)
Q Consensus 30 ~~~~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~ 106 (369)
.....||..|.|. .+.++|++++++.+|..++..++.|+|++|+|. +.+|.++++|++|+|++|+|+.+.+.+
T Consensus 20 ~~~~~cp~~c~c~----l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 95 (330)
T 1xku_A 20 PMGPVCPFRCQCH----LRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGA 95 (330)
T ss_dssp --CCCCCTTCEEE----TTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTT
T ss_pred cccCCCCCCCcCC----CeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHH
Confidence 3456899999998 458999999999999999999999999999965 568999999999999999999999999
Q ss_pred cccccccccccccccceecccCCcccccCcCcc
Q psy12695 107 LDSILELRELKLSGNPIQKITHEAFINVPKLNL 139 (369)
Q Consensus 107 f~~l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~ 139 (369)
|..+++|+.|+|++|.|+.++...+.++..|..
T Consensus 96 ~~~l~~L~~L~Ls~n~l~~l~~~~~~~L~~L~l 128 (330)
T 1xku_A 96 FAPLVKLERLYLSKNQLKELPEKMPKTLQELRV 128 (330)
T ss_dssp TTTCTTCCEEECCSSCCSBCCSSCCTTCCEEEC
T ss_pred hcCCCCCCEEECCCCcCCccChhhcccccEEEC
Confidence 999999999999999999999887766555443
No 50
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.43 E-value=2.3e-13 Score=122.98 Aligned_cols=105 Identities=25% Similarity=0.435 Sum_probs=92.5
Q ss_pred cCcCCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcc
Q psy12695 30 QVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHI 106 (369)
Q Consensus 30 ~~~~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~ 106 (369)
.....||..|.|. .+.++|++++++.+|..++..++.|+|++|+|. +.+|.++++|++|+|++|+|+.+.+.+
T Consensus 22 ~~~~~cp~~c~c~----l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 97 (332)
T 2ft3_A 22 TYSAMCPFGCHCH----LRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKA 97 (332)
T ss_dssp ---CCCCSSCEEE----TTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGG
T ss_pred cccCCCCCCCccc----CCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhH
Confidence 3456899999998 457999999999999999999999999999965 678999999999999999999999999
Q ss_pred cccccccccccccccceecccCCcccccCcCc
Q psy12695 107 LDSILELRELKLSGNPIQKITHEAFINVPKLN 138 (369)
Q Consensus 107 f~~l~~L~~L~L~~N~l~~~~~~~f~~l~~l~ 138 (369)
|..+++|+.|+|++|.|+.++...+.++..|+
T Consensus 98 ~~~l~~L~~L~L~~n~l~~l~~~~~~~L~~L~ 129 (332)
T 2ft3_A 98 FSPLRKLQKLYISKNHLVEIPPNLPSSLVELR 129 (332)
T ss_dssp STTCTTCCEEECCSSCCCSCCSSCCTTCCEEE
T ss_pred hhCcCCCCEEECCCCcCCccCccccccCCEEE
Confidence 99999999999999999999988875555543
No 51
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.42 E-value=1.9e-13 Score=133.60 Aligned_cols=107 Identities=29% Similarity=0.351 Sum_probs=91.7
Q ss_pred CCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccc
Q psy12695 33 AECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDS 109 (369)
Q Consensus 33 ~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~ 109 (369)
..|+..|.|... ...++|.+.+++.+|..+|..++.|+|++|+|. +.+|.++++|++|+|++|+|+.+.+.+|.+
T Consensus 2 ~~~~~~C~~~~~--~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~ 79 (606)
T 3t6q_A 2 TSSDQKCIEKEV--NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQS 79 (606)
T ss_dssp ----CCCEEEET--TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTT
T ss_pred ccccCceecccC--CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccC
Confidence 468899999753 458999999999999999999999999999955 678999999999999999999999999999
Q ss_pred ccccccccccccceecccCCcccccCcCcccc
Q psy12695 110 ILELRELKLSGNPIQKITHEAFINVPKLNLED 141 (369)
Q Consensus 110 l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~ 141 (369)
+++|+.|+|++|.++.+.+..|.++++|...+
T Consensus 80 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 80 QHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred ccccCeeeCCCCcccccChhhhcccccccEee
Confidence 99999999999999999888888877765443
No 52
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=1.1e-12 Score=99.74 Aligned_cols=94 Identities=29% Similarity=0.398 Sum_probs=77.0
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+..+.+.+|+.+.|.|.+.|.|.+.+.|++++..+... ..++... ..+.|.|.+++.+|+|.
T Consensus 8 pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~--------~~~~~~~---~~~~L~i~~v~~~D~G~ 76 (118)
T 2eo9_A 8 PPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQ--------DSRIKQL---ENGVLQIRYAKLGDTGR 76 (118)
T ss_dssp SCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTT--------STTEEEE---ETTEEEEESCCGGGCCC
T ss_pred CCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCC--------CCeEEEc---cCCEEEEccCCcCCCEE
Confidence 567777788899999999999999999999999999988765421 1122221 24589999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
|+|.|.|..|.....+.|.|...+.
T Consensus 77 Y~C~a~n~~g~~~~~~~l~V~~~~~ 101 (118)
T 2eo9_A 77 YTCIASTPSGEATWSAYIEVQEFGV 101 (118)
T ss_dssp EEEEEECSSCEEEEECCEEEECCSC
T ss_pred EEEEEEcCCCcEEEEEEEEEEeCCC
Confidence 9999999999999999999987654
No 53
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.42 E-value=1.6e-12 Score=94.28 Aligned_cols=87 Identities=15% Similarity=0.093 Sum_probs=66.5
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+.++.+.+|+.++|.|.+.+ +.+.+.|++++..+... .++.+........|.|.+++.+|+|.
T Consensus 5 ~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~---------~~~~i~~~g~~~~L~I~~v~~~D~G~ 74 (93)
T 1waa_A 5 LIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAAS---------PDCEIIEDGKKHILILHNCQLGMTGE 74 (93)
T ss_dssp CCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCB---------TTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCC---------CCEEEEEECCEEEEEECCCChhhCEE
Confidence 355666778899999999999999986 45789999999876531 23333344455689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEe
Q psy12695 225 YTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
|+|.|.|. ...+.|.|.
T Consensus 75 Y~C~a~n~----~~sa~L~V~ 91 (93)
T 1waa_A 75 VSFQAANT----KSAANLKVK 91 (93)
T ss_dssp EEEEETTE----EEEEEEEEE
T ss_pred EEEEECCC----cEEEEEEEE
Confidence 99999874 345566664
No 54
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=3.8e-13 Score=101.28 Aligned_cols=95 Identities=18% Similarity=0.222 Sum_probs=71.0
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCC---CCCeEEEEeCCeEeeecccccccCCcceEEEEee------cceeeEEEccc
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGS---PVPKIKWIFKEKIIANISSGLANMNKRQYIIKTI------NSLSNLTIVAV 217 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~---p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~L~I~~v 217 (369)
.+...|.++.+.+|+.++|.|.+.|. |.|.|.|+++......... ..++.+... .....|.|.++
T Consensus 14 ~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~------~~~~~~~~~~~~~~~~~~~~L~I~~v 87 (118)
T 2edn_A 14 VFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKS------GARFSFKESHNSASNVYTVELHIGKV 87 (118)
T ss_dssp SCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCST------TSSCEEEEEECSSSCEEEEEEEESSC
T ss_pred eEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCC------ccEEEeccccccccccceEEEEEeeC
Confidence 45566889999999999999999875 7899999996421111000 011111110 12578999999
Q ss_pred CCCCCEEEEEEEEeCCceEEEEEEEEEeec
Q psy12695 218 TMSDSGIYTCRAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 247 (369)
..+|+|.|.|.+.|..|..++.+.|.|..+
T Consensus 88 ~~~D~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 88 VLGDRGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp CTTTCSCEEEEEECSSCEEEEEECCEEECC
T ss_pred ChhhCEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 999999999999999999999999999764
No 55
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.41 E-value=1.5e-12 Score=103.98 Aligned_cols=97 Identities=25% Similarity=0.422 Sum_probs=77.1
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEe-ecceeeEEEcccCCCCCE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT-INSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G 223 (369)
.|.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+.. ......|.|.+++..|+|
T Consensus 41 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~---------~~~~~~~~~~~~~~L~I~~v~~~D~G 111 (154)
T 1fhg_A 41 KPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKES---------RHFQIDYDEEGNCSLTISEVCGDDDA 111 (154)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCS---------SSEEEEECTTCEEEEEESSCCGGGCE
T ss_pred CCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCC---------CcEEEEECCCCeEEEEECCCChhcCE
Confidence 455666677899999999999999999999999999999776431 1222222 123468999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecCCc
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKVETA 250 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~~~~ 250 (369)
.|+|.|.|..|.....+.|.|...+..
T Consensus 112 ~Y~C~a~N~~G~~~~~~~l~V~~~p~~ 138 (154)
T 1fhg_A 112 KYTCKAVNSLGEATCTAELLVETMGKE 138 (154)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECC---
T ss_pred EEEEEEEECCCeEEEEEEEEEeCcCcC
Confidence 999999999999999999999877643
No 56
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.40 E-value=2e-13 Score=121.84 Aligned_cols=102 Identities=30% Similarity=0.498 Sum_probs=84.5
Q ss_pred CCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccC--Cccccc
Q psy12695 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVP--SHILDS 109 (369)
Q Consensus 35 cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~--~~~f~~ 109 (369)
||..|.|.+ +.++|++++++.+|..+|..++.|+|++|+|. ...|.++++|+.|+|++|+|+.+. +..+.+
T Consensus 1 CP~~C~C~~----~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 76 (306)
T 2z66_A 1 CPSRCSCSG----TEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFG 76 (306)
T ss_dssp CCTTCEEET----TEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHS
T ss_pred CcCCCeeCC----CEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccccccc
Confidence 999999995 47999999999999999999999999999965 567899999999999999998763 345667
Q ss_pred ccccccccccccceecccCCcccccCcCcccc
Q psy12695 110 ILELRELKLSGNPIQKITHEAFINVPKLNLED 141 (369)
Q Consensus 110 l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~ 141 (369)
+++|+.|+|++|.+..++.. |..+++|...+
T Consensus 77 ~~~L~~L~Ls~n~i~~l~~~-~~~l~~L~~L~ 107 (306)
T 2z66_A 77 TTSLKYLDLSFNGVITMSSN-FLGLEQLEHLD 107 (306)
T ss_dssp CSCCCEEECCSCSEEEEEEE-EETCTTCCEEE
T ss_pred ccccCEEECCCCccccChhh-cCCCCCCCEEE
Confidence 88888888888888887653 66666655443
No 57
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.39 E-value=1.3e-12 Score=92.72 Aligned_cols=81 Identities=16% Similarity=0.282 Sum_probs=62.0
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
..++.+.+|+.+.|.|.+.| |.|.|.|++++..+... .++.+........|.|.+++.+|+|.|.|.|.|
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~---------~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 72 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQ---------GRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ 72 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCC---------SSEEEEECSSCEEEEESSCSSTTCEEEEEECTT
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEcccc---------ccEEEeecCCeEEEEecCCCCcccEEEEEEECC
Confidence 35788999999999999976 88999999999887532 233333344456899999999999999999866
Q ss_pred CCceEEEEEEEEEee
Q psy12695 232 GAGEVFTNISLNVIK 246 (369)
Q Consensus 232 ~~g~~~~~~~l~v~~ 246 (369)
. ...+.|.|..
T Consensus 73 ~----~~~a~l~V~e 83 (84)
T 2lu7_A 73 D----SRIFLVSVEE 83 (84)
T ss_dssp T----CEEEEEEECC
T ss_pred E----EEEEEEEEEC
Confidence 4 3455666643
No 58
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.39 E-value=3.9e-13 Score=130.30 Aligned_cols=95 Identities=25% Similarity=0.257 Sum_probs=77.6
Q ss_pred cCCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccc
Q psy12695 32 FAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILD 108 (369)
Q Consensus 32 ~~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~ 108 (369)
...|+..|.|.. .+.++|++++|+.||..+|..++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++++|.
T Consensus 21 ~~~~~~~~~~~~---~~~l~ls~~~L~~ip~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 97 (562)
T 3a79_B 21 IVGSMTPFSNEL---ESMVDYSNRNLTHVPKDLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFL 97 (562)
T ss_dssp ---------------CCEEECTTSCCCSCCTTSCTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTT
T ss_pred HhccccccccCC---CcEEEcCCCCCccCCCCCCCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhC
Confidence 345566677773 368999999999999999999999999999965 57899999999999999999999999999
Q ss_pred cccccccccccccceecccCC
Q psy12695 109 SILELRELKLSGNPIQKITHE 129 (369)
Q Consensus 109 ~l~~L~~L~L~~N~l~~~~~~ 129 (369)
++++|+.|+|++|.|+.++..
T Consensus 98 ~l~~L~~L~Ls~N~l~~lp~~ 118 (562)
T 3a79_B 98 FNQDLEYLDVSHNRLQNISCC 118 (562)
T ss_dssp TCTTCCEEECTTSCCCEECSC
T ss_pred CCCCCCEEECCCCcCCccCcc
Confidence 999999999999999998876
No 59
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.39 E-value=4.4e-12 Score=93.80 Aligned_cols=87 Identities=18% Similarity=0.269 Sum_probs=66.2
Q ss_pred eccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEE-EeecceeeEEEcccCCCCCEEEEEEEEeCCce
Q psy12695 157 AEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYII-KTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE 235 (369)
Q Consensus 157 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~ 235 (369)
...|+.+.|.|.+.|.|.|.+.|++++..+....... ..+.. ......+.|.|.+++.+|+|.|+|.|.|..|.
T Consensus 13 ~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~-----~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~ 87 (103)
T 1wwb_X 13 PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYIC-----TKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGK 87 (103)
T ss_dssp CCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEE-----EEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCE
T ss_pred ceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEe-----EEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCc
Confidence 3568899999999999999999999998775321100 00000 00112456999999999999999999999999
Q ss_pred EEEEEEEEEeecC
Q psy12695 236 VFTNISLNVIKVE 248 (369)
Q Consensus 236 ~~~~~~l~v~~~~ 248 (369)
....+.|.|...|
T Consensus 88 ~~~~~~l~V~~~P 100 (103)
T 1wwb_X 88 DEKQISAHFMGWP 100 (103)
T ss_dssp EEEEEEECCSCCC
T ss_pred EeEEEEEEECCCC
Confidence 9999999887665
No 60
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.39 E-value=3.5e-12 Score=97.00 Aligned_cols=86 Identities=19% Similarity=0.244 Sum_probs=67.5
Q ss_pred ccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEe-----ecceeeEEEcccCCCCCEEEEEEEEeC
Q psy12695 158 EENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT-----INSLSNLTIVAVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 158 ~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 232 (369)
..+..+.|.|.+.|.|.|.|+|+++|..+...... ...... ....+.|.|.++...|+|.|+|.|.|.
T Consensus 13 ~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~-------~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~ 85 (126)
T 1he7_A 13 VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFI-------FTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANP 85 (126)
T ss_dssp CCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSE-------EEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEET
T ss_pred ccCccEEEEEEEeeeCCCeEEEEECCEECCCCCce-------eEEEeeccccccccceEEEECcCCCCCCEEEEEEEEEC
Confidence 46788999999999999999999999877532210 001110 012468999999999999999999999
Q ss_pred CceEEEEEEEEEeecCCc
Q psy12695 233 AGEVFTNISLNVIKVETA 250 (369)
Q Consensus 233 ~g~~~~~~~l~v~~~~~~ 250 (369)
.|...+++.|.|...|..
T Consensus 86 ~G~~~~t~~l~v~~~P~~ 103 (126)
T 1he7_A 86 FGQASASIMAAFMDNPFE 103 (126)
T ss_dssp TEEEEEEEEECCCSCTTS
T ss_pred CCeEEEEEEEEEEcCCCC
Confidence 999999999998877654
No 61
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.39 E-value=4.8e-13 Score=126.13 Aligned_cols=105 Identities=21% Similarity=0.320 Sum_probs=86.3
Q ss_pred CCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCccc-ccCCcccc
Q psy12695 33 AECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQ-FVPSHILD 108 (369)
Q Consensus 33 ~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~-~i~~~~f~ 108 (369)
..||..|.|. ...++|.+++++.+|. +|..+++|+|++|+|. +.+|.++++|++|+|++|.+. .+++.+|.
T Consensus 2 ~p~~~~c~~~----~~~~~c~~~~l~~lp~-l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~ 76 (455)
T 3v47_A 2 DPGTSECSVI----GYNAICINRGLHQVPE-LPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFR 76 (455)
T ss_dssp -----CCEEE----TTEEECCSSCCSSCCC-CCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTT
T ss_pred CCccceeEEE----ccccCcCCCCcccCCC-CCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECccccc
Confidence 4689999998 4579999999999999 9999999999999965 668889999999999999886 68888899
Q ss_pred cccccccccccccceecccCCcccccCcCccccc
Q psy12695 109 SILELRELKLSGNPIQKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 109 ~l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~ 142 (369)
++++|+.|+|++|.++.+.+..|.++++|...++
T Consensus 77 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 110 (455)
T 3v47_A 77 GLSSLIILKLDYNQFLQLETGAFNGLANLEVLTL 110 (455)
T ss_dssp TCTTCCEEECTTCTTCEECTTTTTTCTTCCEEEC
T ss_pred ccccCCEEeCCCCccCccChhhccCcccCCEEeC
Confidence 9999999999999998888888888777655443
No 62
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.39 E-value=7.8e-13 Score=97.22 Aligned_cols=84 Identities=27% Similarity=0.424 Sum_probs=67.3
Q ss_pred CCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeC
Q psy12695 153 PDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 232 (369)
..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+....... .+ ......+.|.|.+++.+|+|.|.|.|.|.
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~------~~--~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 87 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIG------GY--KVRNQHWSLIMESVVPSDKGNYTCVVENE 87 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTT------CC--EEEGGGTEEEECSCCGGGCEEEEEEEEET
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccc------cE--EEecCeEEEEEccCCcCCCEEEEEEEEeC
Confidence 46778999999999999999999999999987765322110 01 12233458999999999999999999999
Q ss_pred CceEEEEEEEEE
Q psy12695 233 AGEVFTNISLNV 244 (369)
Q Consensus 233 ~g~~~~~~~l~v 244 (369)
.|.....+.|.|
T Consensus 88 ~g~~~~~~~l~V 99 (100)
T 3caf_A 88 YGSINHTYHLDV 99 (100)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCEEEEEEEEEE
Confidence 999888888876
No 63
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.38 E-value=9.2e-13 Score=109.33 Aligned_cols=95 Identities=28% Similarity=0.501 Sum_probs=85.5
Q ss_pred CceEEEecCCCCCccCCCCC--CCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQLD--VGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG 120 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~~--~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 120 (369)
..+.++.++|.++.+|..+. ..++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++.+|.++++|+.|+|++
T Consensus 32 ~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 111 (193)
T 2wfh_A 32 DVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHG 111 (193)
T ss_dssp TCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCS
T ss_pred CCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCC
Confidence 35789999999999997663 57999999999965 67899999999999999999999999999999999999999
Q ss_pred cceecccCCcccccCcCccc
Q psy12695 121 NPIQKITHEAFINVPKLNLE 140 (369)
Q Consensus 121 N~l~~~~~~~f~~l~~l~~~ 140 (369)
|.|+.++.+.|..+++|...
T Consensus 112 N~l~~~~~~~~~~l~~L~~L 131 (193)
T 2wfh_A 112 NDISVVPEGAFNDLSALSHL 131 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEE
T ss_pred CCCCeeChhhhhcCccccEE
Confidence 99999999999988876543
No 64
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.38 E-value=4.6e-12 Score=97.09 Aligned_cols=99 Identities=17% Similarity=0.312 Sum_probs=73.1
Q ss_pred cCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEE-eecceeeEEEcccCCCCCEEEEE
Q psy12695 149 RPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK-TINSLSNLTIVAVTMSDSGIYTC 227 (369)
Q Consensus 149 ~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C 227 (369)
...+..+.+.+|++++|.|.+.+.|.+.+.|+++++.+....... .....++.+. .......|.|.+++.+|+|.|+|
T Consensus 5 ~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 83 (124)
T 3rbg_A 5 TNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYP-VLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKC 83 (124)
T ss_dssp CCSEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEE-CSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred cCCCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccc-cccCCcEEEEeCCCCEEEEEECCCChHHCEEEEE
Confidence 344567889999999999999999999999998765433211110 0112233332 23346799999999999999999
Q ss_pred EEEeCCceEEEEEEEEEeecCC
Q psy12695 228 RAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 228 ~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.+.|. |.....+.|.|...|.
T Consensus 84 ~a~n~-g~~~~~~~l~V~~~P~ 104 (124)
T 3rbg_A 84 LHYSD-SVSTKEVKVIVLATMK 104 (124)
T ss_dssp EEESS-SEEEEEEEEEEECC--
T ss_pred EEEcC-CCCcEEEEEEEEeCCC
Confidence 99999 9999999999987764
No 65
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.36 E-value=2e-12 Score=93.28 Aligned_cols=82 Identities=18% Similarity=0.310 Sum_probs=67.0
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
+.+...|....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ....|.|.+++.+|+|.|
T Consensus 4 ~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~------------------~~~~L~i~~v~~~d~G~Y 65 (91)
T 3bfo_A 4 LQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE------------------TKKLYMVPYVDLEHQGTY 65 (91)
T ss_dssp CEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTC------------------CSSEEEESSCCGGGCEEE
T ss_pred eEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcC------------------CCCeEEECCCCHHhCEEE
Confidence 34555677888999999999999999999999999998765421 134799999999999999
Q ss_pred EEEEEeCCceEE-EEEEEEEe
Q psy12695 226 TCRAKNGAGEVF-TNISLNVI 245 (369)
Q Consensus 226 ~C~a~n~~g~~~-~~~~l~v~ 245 (369)
.|.|.|..|... ..+.|.|.
T Consensus 66 ~C~a~n~~g~~~s~~~~l~V~ 86 (91)
T 3bfo_A 66 WCHVYNDRDSQDSKKVEIIID 86 (91)
T ss_dssp EEEEECSSCEEECCCEEEEEC
T ss_pred EEEEEcCCCCEEeeeEEEEEe
Confidence 999999999754 44666664
No 66
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.36 E-value=8.4e-12 Score=92.22 Aligned_cols=90 Identities=21% Similarity=0.231 Sum_probs=69.8
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEE
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTC 227 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 227 (369)
+...+.++.+.+|+.++|.|.+.+ |.+.+.|++++..+..... .++.+........|.|.+++.+|+|.|+|
T Consensus 10 ~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~-------~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 81 (103)
T 1x44_A 10 VTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPK-------SRYRIRVEGKKHILIIEGATKADAAEYSV 81 (103)
T ss_dssp CSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTT-------CSEEEEEETTEEEEEEEEECTTTCSEEEE
T ss_pred eeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCc-------eEEEEEEcCCEEEEEECCCCcccCEEEEE
Confidence 566678899999999999999988 7799999999987653211 13344444456789999999999999999
Q ss_pred EEEeCCceEEEEEEEEEeecCC
Q psy12695 228 RAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 228 ~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|.| ....+.|.|...+.
T Consensus 82 ~a~n----~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 82 MTTG----GQSSAKLSVDLKSG 99 (103)
T ss_dssp EETT----EEEEEEEEEECCCS
T ss_pred EECC----CcEEEEEEEeCCCC
Confidence 9987 46667777776553
No 67
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.36 E-value=1.3e-12 Score=114.84 Aligned_cols=104 Identities=35% Similarity=0.416 Sum_probs=92.9
Q ss_pred CCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccc
Q psy12695 38 TCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELR 114 (369)
Q Consensus 38 ~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~ 114 (369)
.|.|... ...++|.+.+++.+|..+|.+++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++.+|..+++|+
T Consensus 2 ~C~~~~~--~~~~~c~~~~l~~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 79 (276)
T 2z62_A 2 PCVEVVP--NITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLS 79 (276)
T ss_dssp CSEEEET--TTEEECTTSCCSSCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CceeccC--CceEEecCCCccccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCC
Confidence 4777653 357999999999999999999999999999965 56899999999999999999999999999999999
Q ss_pred cccccccceecccCCcccccCcCcccccc
Q psy12695 115 ELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 115 ~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
.|+|++|.|+.+++..|.++++|...++.
T Consensus 80 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 80 TLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp EEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred EEECCCCccCccChhhhcCCccccEEECC
Confidence 99999999999999999988887665543
No 68
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.35 E-value=1.4e-12 Score=115.47 Aligned_cols=106 Identities=23% Similarity=0.303 Sum_probs=82.0
Q ss_pred CCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCC----------
Q psy12695 38 TCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPS---------- 104 (369)
Q Consensus 38 ~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~---------- 104 (369)
.|.|......+.++|++++|+.+|..+|..++.|+|++|+|. +.+|.++++|+.|+|++|+|+.++.
T Consensus 3 ~C~~~~l~~l~~l~~~~~~l~~ip~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L 82 (290)
T 1p9a_G 3 ICEVSKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTL 82 (290)
T ss_dssp SSEEECSTTCCEEECTTSCCSSCCSCCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEE
T ss_pred cccccccCCccEEECCCCCCCcCCCCCCCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCCCCCCcCCEE
Confidence 478876666789999999999999999999999999999954 4566666665555555555544332
Q ss_pred -----------cccccccccccccccccceecccCCcccccCcCcccccc
Q psy12695 105 -----------HILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 105 -----------~~f~~l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
..|..+++|+.|+|++|.|+.++++.|.++++|...++.
T Consensus 83 ~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~ 132 (290)
T 1p9a_G 83 DLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132 (290)
T ss_dssp ECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECT
T ss_pred ECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECC
Confidence 246778889999999999999998889888887665544
No 69
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.34 E-value=7.3e-12 Score=92.68 Aligned_cols=90 Identities=19% Similarity=0.324 Sum_probs=69.1
Q ss_pred CCCccCCCCC---eeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCC
Q psy12695 145 SPNIRPITPD---VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 145 ~p~i~~~~~~---~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 221 (369)
.|.+...+.. +.+.+|+.++|.|.+.+.|.+ +.|++++..+... .++.+........|.|.+++.+|
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~---------~~~~~~~~~~~~~L~I~~~~~~D 76 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEES---------ELLVVKMDGRKHRLILPEAKVQD 76 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCB---------TTBEEEEETTEEEEEESSCCTTT
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCC---------CCEEEEeCCCEEEEEECCCChhh
Confidence 4556666666 789999999999999999999 9999999876432 12233334455689999999999
Q ss_pred CEEEEEEEEeCCceEEEEEEEEEeecC
Q psy12695 222 SGIYTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 222 ~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
+|.|.|.+.|..+ .+.|.|..++
T Consensus 77 ~G~Y~C~a~n~~~----~~~l~V~~~P 99 (104)
T 2e6p_A 77 SGEFECRTEGVSA----FFGVTVQDPS 99 (104)
T ss_dssp CEEEEEECSSCCC----CEEEEEECCC
T ss_pred CEEEEEEECCceE----EEEEEEcCCC
Confidence 9999999999754 4566666554
No 70
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=5.3e-12 Score=93.29 Aligned_cols=91 Identities=22% Similarity=0.371 Sum_probs=70.7
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
+|.+...+.++.+.+|+.+.|.|.+.+ |.+.+.|++++..+.. ..++.+........|.|.+++.+|+|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~---------~~~~~~~~~~~~~~L~I~~v~~~D~G~ 77 (103)
T 2edf_A 8 PAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRK---------SQKYDVVCEGTMAMLVIRGASLKDAGE 77 (103)
T ss_dssp CCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCC---------SSSEEEEEETTEEEEEESSCCTTTCSE
T ss_pred CcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccC---------CCCEEEEECCCEEEEEECCCCcccCEE
Confidence 355556678899999999999999997 8889999999876642 123344444445689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
|.|.|.| ....+.|.|...+.
T Consensus 78 Y~C~a~n----~~~~~~l~V~~~p~ 98 (103)
T 2edf_A 78 YTCEVEA----SKSTASLHVEEKAS 98 (103)
T ss_dssp EEEECSS----CEEEEEEEECCCSS
T ss_pred EEEEEcc----CCcEEEEEEeCCCC
Confidence 9999999 35667788876654
No 71
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=6.2e-12 Score=92.23 Aligned_cols=85 Identities=20% Similarity=0.322 Sum_probs=68.6
Q ss_pred CCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEE
Q psy12695 151 ITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAK 230 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 230 (369)
.+..+.+.+|+.++|.|.+.|.| |.+.|++++..+.... ++.+ ....|.|.+++.+|+|.|.|.|.
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~---------~~~~----~~~~L~i~~v~~~D~G~Y~C~a~ 74 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESN---------RTRI----TGEEVEVQDSVPADSGLYACVTS 74 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCS---------SEEE----CSSEEEETTCCTTTCEEEEEEEE
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCC---------cEEE----ECCEEEEccCCHHHCEEEEEEEE
Confidence 45667889999999999999987 7999999986653211 2221 14589999999999999999999
Q ss_pred eCCceEEEEEEEEEeecCC
Q psy12695 231 NGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 231 n~~g~~~~~~~l~v~~~~~ 249 (369)
|..|.....+.|.|...+.
T Consensus 75 n~~g~~~~~~~l~V~~~~~ 93 (99)
T 2cr3_A 75 SPSGSDTTYFSVNVSDALP 93 (99)
T ss_dssp ETTEEEEEEEEECBCSCCS
T ss_pred eCCceEEEEEEEEEecCCC
Confidence 9999998888888876654
No 72
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.33 E-value=1.7e-11 Score=89.16 Aligned_cols=86 Identities=20% Similarity=0.256 Sum_probs=67.0
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
+.+...+.++.+.+|+.+.|.|.+ +.|.+.+.|++++..+... .++.+........|.|.+++.+|+|.|
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~---------~~~~~~~~~~~~~L~I~~v~~~D~G~Y 78 (95)
T 2k1m_A 9 SAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISAS---------NKYGLATEGTRHTLTVREVGPADQGSY 78 (95)
T ss_dssp CCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSS---------TTCEEEEETTEEEEEESSCCTTCCSEE
T ss_pred CeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCC---------CcEEEEEcCCEEEEEEcCCCcccCEEE
Confidence 456666788999999999999999 8888999999998776421 123333334456899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEe
Q psy12695 226 TCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~ 245 (369)
.|.| |.....+.|.|.
T Consensus 79 ~C~a----g~~~~~~~l~V~ 94 (95)
T 2k1m_A 79 AVIA----GSSKVKFDLKVI 94 (95)
T ss_dssp EEEE----TTEEEEEEEEEE
T ss_pred EEEE----CCceEEEEEEEe
Confidence 9999 556666777664
No 73
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.33 E-value=3.3e-12 Score=91.99 Aligned_cols=76 Identities=20% Similarity=0.310 Sum_probs=57.1
Q ss_pred CccCCCCC--eeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 147 NIRPITPD--VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 147 ~i~~~~~~--~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|..+..+ +.+.+|+.+.|.|.+.+ |.|.+.|+++|..+... .++.+........|.|.+++.+|+|.
T Consensus 6 ~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~---------~~~~i~~~~~~~~L~I~~v~~~D~G~ 75 (91)
T 2lvc_A 6 HIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEES---------DFVVLENEGPHRRLVLPATQPSDGGE 75 (91)
T ss_dssp CCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCC---------SSCEEEEETTEEEEEESSCCGGGCSE
T ss_pred EEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeee---------eeeeEEecCCeEEEEeCCCChhhcEE
Confidence 34444444 34578999999999966 88899999999876532 23333444555689999999999999
Q ss_pred EEEEEEeC
Q psy12695 225 YTCRAKNG 232 (369)
Q Consensus 225 Y~C~a~n~ 232 (369)
|.|.|.|.
T Consensus 76 Y~C~a~n~ 83 (91)
T 2lvc_A 76 FQCVAGDE 83 (91)
T ss_dssp EEEECSSC
T ss_pred EEEEEcce
Confidence 99998775
No 74
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.32 E-value=1.5e-12 Score=118.67 Aligned_cols=134 Identities=24% Similarity=0.328 Sum_probs=95.9
Q ss_pred hhHHHHHHHHHHHHh--HhccCcCcCCCCCCCeecccC------------CceEEEecCCCCCccCCC-C--CCCccEEE
Q psy12695 10 VMMIYEWRVYIMVLV--CTGCLQVFAECPSTCECKWKG------------GKETVLCKAKNFTTIPEQ-L--DVGTQVLD 72 (369)
Q Consensus 10 ~~~~~~~~~~~~~~~--~~~~~~~~~~cp~~C~c~~~~------------~~~~~~c~~~~l~~ip~~-~--~~~~~~L~ 72 (369)
.+++.+|.++++++. ..........||..|.|.... ..+.++.++++++.+|.. + ...++.|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 82 (353)
T 2z80_A 3 HTLWMVWVLGVIISLSKEESSNQASLSCDRNGICKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALV 82 (353)
T ss_dssp ------------------------CCEECTTSEEECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred ceeHHHhhhhheeeccCccCCCccCCCCCCCeEeeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEE
Confidence 344444443333322 223345677899988776432 356899999999998873 3 35799999
Q ss_pred eecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccccceecccC-CcccccCcCcccccc
Q psy12695 73 LSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITH-EAFINVPKLNLEDFA 143 (369)
Q Consensus 73 l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~-~~f~~l~~l~~~~~~ 143 (369)
|++|+|. +.+|.++++|++|+|++|+|+.+++.+|..+++|+.|+|++|.++.++. ..|..+++|...++.
T Consensus 83 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~ 157 (353)
T 2z80_A 83 LTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVG 157 (353)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEE
T ss_pred CCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECC
Confidence 9999965 6789999999999999999999999889999999999999999999988 788888887776554
No 75
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.32 E-value=2.2e-12 Score=126.10 Aligned_cols=101 Identities=28% Similarity=0.414 Sum_probs=87.0
Q ss_pred CeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccc
Q psy12695 39 CECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRE 115 (369)
Q Consensus 39 C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~ 115 (369)
|.|... ...++|++++++.+|..+|..++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++.+|.++++|+.
T Consensus 7 c~~~~~--~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 7 CIEVVP--NITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp CEEEET--TTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred ceecCC--CCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 666433 458999999999999999999999999999954 568999999999999999999998889999999999
Q ss_pred ccccccceecccCCcccccCcCcccc
Q psy12695 116 LKLSGNPIQKITHEAFINVPKLNLED 141 (369)
Q Consensus 116 L~L~~N~l~~~~~~~f~~l~~l~~~~ 141 (369)
|+|++|.|+.+.++.|.++++|...+
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred eECCCCcccccChhhcCCcccCCEEE
Confidence 99999999998888888877765543
No 76
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.31 E-value=1.9e-11 Score=89.71 Aligned_cols=90 Identities=19% Similarity=0.227 Sum_probs=70.1
Q ss_pred CCCccCCCCC-eeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 145 SPNIRPITPD-VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 145 ~p~i~~~~~~-~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
.|.+...+.+ ..+.+|+.+.|.|.+. .|.|.+.|++++..+... .++.+........|.|.+++.+|+|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~---------~~~~~~~~~~~~~L~I~~~~~~D~G 76 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPS---------TKYIFEHKGCQRILFINNCQMTDDS 76 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCB---------TTEEEEEETTEEEEEEEEECTTTCC
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCC---------CCEEEEecCCEEEEEEcCCCcCcCE
Confidence 4666655665 6789999999999998 789999999998766431 1333334444568999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecC
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
.|.|.| |.....+.|.|..++
T Consensus 77 ~Y~C~a----g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 77 EYYVTA----GDEKCSTELFVRSGP 97 (100)
T ss_dssp EEEEEE----TTEEEEEEEEECCSC
T ss_pred EEEEEE----CCceEEEEEEEecCC
Confidence 999999 667778888887765
No 77
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=99.31 E-value=2.3e-12 Score=99.30 Aligned_cols=62 Identities=29% Similarity=0.463 Sum_probs=44.1
Q ss_pred CCCCCCeecccCCceEEEecCCCCC--ccCCCCCCCccEEEeeccee---ChhhccCCcccCeeeccCCcc
Q psy12695 34 ECPSTCECKWKGGKETVLCKAKNFT--TIPEQLDVGTQVLDLSDNFL---DRYTFRKLINLVELDLSYNQI 99 (369)
Q Consensus 34 ~cp~~C~c~~~~~~~~~~c~~~~l~--~ip~~~~~~~~~L~l~~n~i---~~~~f~~l~~L~~L~Ls~N~l 99 (369)
.||..|.|. ..+|+|++++|+ .||..+|.+++.|+|++|+| .+++|.++++|+.|+|++|.+
T Consensus 1 ~CP~~C~C~----~~~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 1 PCPAPCSCA----GTLVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CCCTTCEEE----TTEEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CcCCCCEEc----CCEEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 599999998 458999999999 99999987766655555553 244555555555555555544
No 78
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=9.7e-12 Score=92.10 Aligned_cols=91 Identities=14% Similarity=0.176 Sum_probs=70.2
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCC-eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVP-KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
+.+...+.++.+.+|+.++|.|.+.+.|.+ .+.|++++..+... .++.+........|.|.+++.+|+|.
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~---------~r~~~~~~~~~~~L~I~~v~~~D~G~ 79 (104)
T 2eny_A 9 VGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSS---------SRFQATRQGRKYILVVREAAPSDAGE 79 (104)
T ss_dssp CCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBC---------SSCEEEEETTEEEEEECSCCTTTCSC
T ss_pred CEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCC---------CCEEEEEcCCEEEEEECCCCHHHCEE
Confidence 456667788999999999999999988754 79999998766431 13333334455689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
|+|.+.| ....+.|.|..++.
T Consensus 80 Y~C~a~~----~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 80 VVFSVRG----LTSKASLIVRERSG 100 (104)
T ss_dssp EEEEETT----EEEEECEEEECCCS
T ss_pred EEEEECC----eeEEEEEEEeCCCc
Confidence 9998844 55778888887653
No 79
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.30 E-value=8.4e-12 Score=91.27 Aligned_cols=81 Identities=25% Similarity=0.274 Sum_probs=64.8
Q ss_pred CCCCeeeccCCeEEEEEEee-CCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEE
Q psy12695 151 ITPDVTAEENENVTLSCRAT-GSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRA 229 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 229 (369)
.+..+.+.+|+.++|.|.+. |.|.+.+.|++++..... .... ...+.|.|.+++.+|+|.|.|.+
T Consensus 16 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~---------~~~~-----~~~~~L~i~~v~~~D~G~Y~C~a 81 (98)
T 1gl4_B 16 EQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLP---------SRAM-----DFNGILTIRNVQPSDAGTYVCTG 81 (98)
T ss_dssp SCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCC---------TTEE-----EETTEEEECSCCGGGCEEEEEEE
T ss_pred CCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCC---------ceee-----cCCCEEEEeCCChhhCEEEEEEe
Confidence 35667899999999999998 789999999997533211 0011 12458999999999999999999
Q ss_pred EeCCceEEEEEEEEEe
Q psy12695 230 KNGAGEVFTNISLNVI 245 (369)
Q Consensus 230 ~n~~g~~~~~~~l~v~ 245 (369)
.|..|.....+.|.|.
T Consensus 82 ~n~~g~~~~~~~l~V~ 97 (98)
T 1gl4_B 82 SNMFAMDQGTATLHVQ 97 (98)
T ss_dssp ECSSCEEEEEEEEEEC
T ss_pred cCCCCccccEEEEEEe
Confidence 9999999888888774
No 80
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.29 E-value=4.3e-12 Score=123.05 Aligned_cols=102 Identities=35% Similarity=0.431 Sum_probs=89.2
Q ss_pred CCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccc
Q psy12695 38 TCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELR 114 (369)
Q Consensus 38 ~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~ 114 (369)
.|.|... ...++|++.+++.||..+|..++.|+|++|+|. +.+|.++++|+.|||++|+|+.+++.+|.++++|+
T Consensus 2 ~c~~~~~--~~~~~c~~~~l~~ip~~l~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~ 79 (570)
T 2z63_A 2 PCVEVVP--NITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLS 79 (570)
T ss_dssp CSEEEET--TTEEECCSSCCSSCCSSSCSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CccccCC--CcEEEeCCCCccccCCCccccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCC
Confidence 5777643 468999999999999999999999999999954 66899999999999999999999999999999999
Q ss_pred cccccccceecccCCcccccCcCcccc
Q psy12695 115 ELKLSGNPIQKITHEAFINVPKLNLED 141 (369)
Q Consensus 115 ~L~L~~N~l~~~~~~~f~~l~~l~~~~ 141 (369)
.|+|++|.++.++++.|.++++|...+
T Consensus 80 ~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 80 TLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp EEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred EEeCcCCcCCccCHhhhcCcccccccc
Confidence 999999999999888888777755433
No 81
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.29 E-value=1.7e-11 Score=91.61 Aligned_cols=96 Identities=17% Similarity=0.310 Sum_probs=68.5
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCC--CCCeEEEEeCCeEeeecccc---cccCCcceEEEEeecceeeEEEcccCC
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGS--PVPKIKWIFKEKIIANISSG---LANMNKRQYIIKTINSLSNLTIVAVTM 219 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~--p~p~i~W~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~I~~v~~ 219 (369)
.|.+...+....+.+|+.++|.|.+.+. +.+.+.|++++..+...... ........ .....+.|.|.+++.
T Consensus 10 ~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~L~I~~v~~ 85 (112)
T 3so5_A 10 XPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGE----LMEYTTILRLRNVEF 85 (112)
T ss_dssp SCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSS----CEEEEEEEEECSCCG
T ss_pred CCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCC----ccccceEEEEecccc
Confidence 4667777888999999999999999855 45789999998765421100 00000000 001146899999999
Q ss_pred CCCEEEEEEEEeCCce-EEEEEEEEE
Q psy12695 220 SDSGIYTCRAKNGAGE-VFTNISLNV 244 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~g~-~~~~~~l~v 244 (369)
+|+|.|.|.|.|..|. .+..+.|.|
T Consensus 86 ~D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 86 TSEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ccCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 9999999999999998 446677765
No 82
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.28 E-value=2e-11 Score=93.17 Aligned_cols=97 Identities=23% Similarity=0.253 Sum_probs=68.7
Q ss_pred CCCeeeccCCeEEEEEEeeC--CCCCeEEEEeCCeEeeecccccccCCcceEEEE-eecceeeEEEcccCCCCCEEEEEE
Q psy12695 152 TPDVTAEENENVTLSCRATG--SPVPKIKWIFKEKIIANISSGLANMNKRQYIIK-TINSLSNLTIVAVTMSDSGIYTCR 228 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g--~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~ 228 (369)
+..+.+.+|+.+.|.|.+.| .|.+.+.|++++..+...... ......+... .....+.|.|.+++.+|+|.|+|.
T Consensus 15 ~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 92 (122)
T 3s35_X 15 SHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLV--NRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCA 92 (122)
T ss_dssp CSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHB--CCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceee--eeccccccCCceeeEEEEEEECCCCcccCEEEEEE
Confidence 34568899999999999998 445689999987643210000 0000011000 012356899999999999999999
Q ss_pred EEeCCceEEEEEEEEEeecCCc
Q psy12695 229 AKNGAGEVFTNISLNVIKVETA 250 (369)
Q Consensus 229 a~n~~g~~~~~~~l~v~~~~~~ 250 (369)
|.|..|.....+.|.|...+..
T Consensus 93 a~n~~g~~~~~~~l~V~~~p~i 114 (122)
T 3s35_X 93 ASSGLMTKKNSTFVRVHEKPFV 114 (122)
T ss_dssp EECSSCEEEEEEEEEEEEEECC
T ss_pred EccCCCceEEEEEEEEeccCeE
Confidence 9999999999999999887643
No 83
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.27 E-value=4.4e-11 Score=88.23 Aligned_cols=92 Identities=20% Similarity=0.256 Sum_probs=72.1
Q ss_pred CCCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 144 CSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 144 c~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
..|.+...+.++.+.+|+.+.|.|. .+.|.+.+.|++++..+... .++.+........|.|.+++.+|+|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~---------~~~~~~~~~~~~~L~I~~v~~~D~G 76 (103)
T 2dku_A 7 GANCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRAS---------GKHQPSQEGLTLRLTISALEKADSD 76 (103)
T ss_dssp CCCCCSSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSS---------SSEEEEEETTEEEEEEESCCTTTCS
T ss_pred CCCEeEecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCC---------CeEEEEeCCCEEEEEECCCCcccCE
Confidence 3567777788999999999999999 48899999999998765421 2344433444558999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|+|. .|.....+.|.|...+.
T Consensus 77 ~Y~C~----~g~~~~~~~l~V~~~p~ 98 (103)
T 2dku_A 77 TYTCD----IGQAQSRAQLLVQGRRS 98 (103)
T ss_dssp EEEEE----CSSCBCCEEEEEECSCC
T ss_pred EEEEE----eCCceEEEEEEEeCccC
Confidence 99998 56666778888877654
No 84
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.27 E-value=3.4e-12 Score=123.20 Aligned_cols=94 Identities=26% Similarity=0.313 Sum_probs=83.6
Q ss_pred EEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccccceecc
Q psy12695 50 VLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126 (369)
Q Consensus 50 ~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~ 126 (369)
++|++++++.||..++..+++|+|++|+|. +.+|.++++|++|+|++|+|+.+++.+|..+++|+.|+|++|.++.+
T Consensus 10 c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 89 (549)
T 2z81_A 10 CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSL 89 (549)
T ss_dssp EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSC
T ss_pred EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCcc
Confidence 467889999999999999999999999965 57899999999999999999999999999999999999999999999
Q ss_pred cCCcccccCcCcccccc
Q psy12695 127 THEAFINVPKLNLEDFA 143 (369)
Q Consensus 127 ~~~~f~~l~~l~~~~~~ 143 (369)
++..|.++++|...++.
T Consensus 90 ~~~~~~~l~~L~~L~Ls 106 (549)
T 2z81_A 90 SSSWFGPLSSLKYLNLM 106 (549)
T ss_dssp CHHHHTTCTTCCEEECT
T ss_pred CHHHhccCCCCcEEECC
Confidence 98888888887655443
No 85
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.27 E-value=1.8e-11 Score=102.70 Aligned_cols=80 Identities=21% Similarity=0.300 Sum_probs=65.7
Q ss_pred CeeeccCCeEEEEEEeeCC-CCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeC
Q psy12695 154 DVTAEENENVTLSCRATGS-PVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 232 (369)
+..+.+|+.+.|.|.+.|. |.|.|.|++++..+..... . ....+...|.|.+++.+|+|.|+|.|.|.
T Consensus 125 ~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~--~---------~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 193 (207)
T 3rbs_A 125 SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEK--H---------DFKDGICTLLITEFSKKDAGIYEVILKDD 193 (207)
T ss_dssp EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCC--C---------CCSSEEEEEEETTCCGGGCEEEEEEEEET
T ss_pred CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCc--e---------EcCCCEEEEEECCCCcccCEEEEEEEEcC
Confidence 3678899999999999999 9999999999988754211 1 11123457999999999999999999999
Q ss_pred CceEEEEEEEEE
Q psy12695 233 AGEVFTNISLNV 244 (369)
Q Consensus 233 ~g~~~~~~~l~v 244 (369)
.|.....+.|.+
T Consensus 194 ~G~~~~~~~L~~ 205 (207)
T 3rbs_A 194 RGKDKSRLKLVD 205 (207)
T ss_dssp TEEEEEEEEECC
T ss_pred CCEEEEEEEEec
Confidence 999998888754
No 86
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.27 E-value=1.9e-11 Score=90.24 Aligned_cols=92 Identities=21% Similarity=0.439 Sum_probs=71.2
Q ss_pred CCCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 144 CSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 144 c~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
.+|.+...+.++.+.+|+.+.|.|.+.+.|.+ +.|++++..+.. ..++.+........|.|.+++.+|+|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~---------~~~~~~~~~~~~~~L~I~~v~~~D~G 76 (103)
T 2e7b_A 7 GPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRP---------GDKYSLRQEGAMLELVVRNLRPQDSG 76 (103)
T ss_dssp CCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCC---------SSSEEEEECSSEEEEEECSCCTTTCC
T ss_pred CCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCC---------CCcEEEEEcCCEEEEEEccCCcccCE
Confidence 35667777888999999999999999999999 999998876532 12334443444567999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|.|. .|.....+.|.|...+.
T Consensus 77 ~Y~C~----~g~~~~~~~l~V~~~p~ 98 (103)
T 2e7b_A 77 RYSCS----FGDQTTSATLTVTALPS 98 (103)
T ss_dssp CEEEE----CSSCBCCBCEEEECCCC
T ss_pred EEEEE----ECCcEEEEEEEEEeccc
Confidence 99998 55566667788876653
No 87
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.26 E-value=5e-12 Score=93.99 Aligned_cols=89 Identities=20% Similarity=0.281 Sum_probs=68.2
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+.++.+.+|+.+.|.|.+.+.|.+ +.|++++..+... .++.+........|.|.+++.+|+|.
T Consensus 8 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~---------~~~~~~~~~~~~~L~I~~v~~~D~G~ 77 (106)
T 2dlt_A 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPS---------KRITISHVGRFHKLVIDDVRPEDEGD 77 (106)
T ss_dssp CCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCC---------SSCEEEEETTEEEEEESSCCTTTCSC
T ss_pred CCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCC---------CCEEEEEeCCEEEEEECCCCcCCCEE
Confidence 4666677888999999999999999999888 9999998766421 12333333445689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEe
Q psy12695 225 YTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
|+|.|.|.. ....+.|.|.
T Consensus 78 Y~C~a~n~~--~~~~~~l~V~ 96 (106)
T 2dlt_A 78 YTFVPDGYA--LSLSAKLNFL 96 (106)
T ss_dssp EEEEEETSC--CCCCBCEEEE
T ss_pred EEEEEccCC--ceEEEEEEEE
Confidence 999999983 3344555554
No 88
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.26 E-value=6.9e-11 Score=88.79 Aligned_cols=89 Identities=17% Similarity=0.278 Sum_probs=69.9
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+.++.+.+|+.+.|.|.+.+. |.+.|++++..+.. ..++.+........|.|.+++.+|+|.|
T Consensus 20 p~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~---------~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (113)
T 2edh_A 20 IKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRD---------GDRHSLRQDGARCELQIRGLVAEDAGEY 88 (113)
T ss_dssp CCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCC---------SSSEEEEEETTEEEEEECSCCSTTCEEE
T ss_pred CcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCC---------CCcEEEEECCCEEEEEECCCChhhCEEE
Confidence 455566778899999999999999775 68999999876542 1234444444456899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEeecCC
Q psy12695 226 TCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|.| |.....+.|.|...+.
T Consensus 89 ~C~a----~~~~~~~~l~V~~~p~ 108 (113)
T 2edh_A 89 LCMC----GKERTSAMLTVRAMPS 108 (113)
T ss_dssp EEEE----TTEEEEEEEEECCCCC
T ss_pred EEEe----CCCCEEEEEEEeCCCC
Confidence 9999 6777888898887664
No 89
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.26 E-value=7.1e-11 Score=89.51 Aligned_cols=82 Identities=20% Similarity=0.180 Sum_probs=63.9
Q ss_pred CeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEee--cceeeEEEcccCCCCCEEEEEEEEeCCceEEE
Q psy12695 161 ENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTI--NSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFT 238 (369)
Q Consensus 161 ~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~ 238 (369)
+...|.|.+.|.|.|.+.|++++..+...... ....... ...+.|.|.+++.+|+|.|.|.|.|..|....
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~-------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 93 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLHNGQPLRESKII-------HVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQ 93 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEETTEECCCSSSE-------EEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEE
T ss_pred cceEEEEEeeeeCCCeEEEEECCEECCCCCce-------eEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEee
Confidence 66788999999999999999999876532211 1111110 13568999999999999999999999999999
Q ss_pred EEEEEEeecCC
Q psy12695 239 NISLNVIKVET 249 (369)
Q Consensus 239 ~~~l~v~~~~~ 249 (369)
.+.|.|...|.
T Consensus 94 ~~~l~v~~~P~ 104 (118)
T 1wwc_A 94 TINGHFLKEPF 104 (118)
T ss_dssp EEEECCSCCCC
T ss_pred EEEEEEccCCC
Confidence 99998877664
No 90
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.26 E-value=6.9e-11 Score=93.13 Aligned_cols=98 Identities=17% Similarity=0.277 Sum_probs=72.2
Q ss_pred cCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEE-EeecceeeEEEcccCCCCCEEEEE
Q psy12695 149 RPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYII-KTINSLSNLTIVAVTMSDSGIYTC 227 (369)
Q Consensus 149 ~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~I~~v~~~D~G~Y~C 227 (369)
...+..+.+.+|++++|.|.+.+.|.+.+.|++.+........... ....++.. ........|.|.+++.+|+|.|+|
T Consensus 42 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~-~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 120 (145)
T 1z9m_A 42 QPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRA-LRDNRIQLVTSTPHELSISISNVALADEGEYTC 120 (145)
T ss_dssp CCBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEEC-SCCTTEEEEEECSSEEEEEECSCCGGGCEEEEE
T ss_pred ecCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCcee-cccCCEEEecCCCCeEEEEECCCChhhCEEEEE
Confidence 3456789999999999999999999899999965433221111111 11123332 223346789999999999999999
Q ss_pred EEEeCCceEEEEEEEEEeecC
Q psy12695 228 RAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 228 ~a~n~~g~~~~~~~l~v~~~~ 248 (369)
.+.|. |.....+.|.|..+|
T Consensus 121 ~~~n~-~~~~~~~~L~V~~~P 140 (145)
T 1z9m_A 121 SIFTM-PVRTAKSLVTVLGIP 140 (145)
T ss_dssp EECSS-SCEEEEEEEEEECCC
T ss_pred EEEcC-CCceEEEEEEEEeCC
Confidence 99999 889999999998765
No 91
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.25 E-value=2.1e-11 Score=88.60 Aligned_cols=83 Identities=19% Similarity=0.263 Sum_probs=66.8
Q ss_pred CCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEE
Q psy12695 151 ITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAK 230 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 230 (369)
.|....+.+|+.+.|.|.+.| .|.+.|++++..+... .++.. ..+.|.|.+++.+|+|.|.|.|.
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~---------~~~~~----~~~~L~i~~~~~~D~G~Y~C~a~ 71 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPN---------NRTVL----IGEYLQIKGATPRDSGLYACTAA 71 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCC---------SSEEE----ETTEEEECSCCGGGCEEEEEEEE
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCC---------ceEEE----eCCEEEECcCCcccCEEEEEEEc
Confidence 456788999999999999987 4799999998776421 12222 14589999999999999999999
Q ss_pred eCCceEEEEEEEEEeecC
Q psy12695 231 NGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 231 n~~g~~~~~~~l~v~~~~ 248 (369)
|..|.....+.|.|..+.
T Consensus 72 n~~g~~~~~~~l~V~~~~ 89 (95)
T 4hwu_A 72 RTVDSETWIFMVNVTDAA 89 (95)
T ss_dssp CSSCEEEEEEEEEECCC-
T ss_pred cCCCcEEEEEEEEEeCCc
Confidence 999999999999887654
No 92
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.25 E-value=1.2e-11 Score=104.91 Aligned_cols=98 Identities=24% Similarity=0.327 Sum_probs=86.4
Q ss_pred CceEEEecCCCCCccCCCC---CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQL---DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLS 119 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~---~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 119 (369)
..+.++.++++++.+|... ...++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++..|.++++|+.|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 3578999999999988643 257999999999954 6899999999999999999999999999999999999999
Q ss_pred ccceecccCCcccccCcCcccccc
Q psy12695 120 GNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 120 ~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
+|.|+.+.++.|..+++|...++.
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~ 136 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLY 136 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCCCEeCHHHcCCCCCCCEEECC
Confidence 999999999999988887665543
No 93
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=5.4e-12 Score=91.99 Aligned_cols=82 Identities=20% Similarity=0.355 Sum_probs=64.4
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ....|.|.+++.+|+|.|
T Consensus 11 ~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~------------------~~~~L~i~~v~~~d~G~Y 72 (96)
T 2ens_A 11 VQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP------------------PSPVLILPEIGPQDQGTY 72 (96)
T ss_dssp CCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSC------------------CCSEEEEESCCTTTCEEE
T ss_pred CEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCC------------------CCCEEEECCCCcccCEEE
Confidence 44555667888999999999999999999999999988655321 245799999999999999
Q ss_pred EEEEEeCCce--EEEEEEEEEe
Q psy12695 226 TCRAKNGAGE--VFTNISLNVI 245 (369)
Q Consensus 226 ~C~a~n~~g~--~~~~~~l~v~ 245 (369)
.|.+.|..|. .+..+.|.|.
T Consensus 73 ~C~a~n~~~~~~~s~~~~v~V~ 94 (96)
T 2ens_A 73 SCVATHSSHGPQESRAVSISII 94 (96)
T ss_dssp ECEECCSSCCCEECCCEEEEEC
T ss_pred EEEEEeCCCCcEEEEEEEEEEe
Confidence 9999997554 3344555553
No 94
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.25 E-value=2.4e-12 Score=98.42 Aligned_cols=97 Identities=29% Similarity=0.448 Sum_probs=75.2
Q ss_pred CCCCccCCCCCeeeccCCeEEEEEEeeCCCCCe-EEEEeCCeEeeecccccccCCcceEEEE--eecc--eeeEEEcccC
Q psy12695 144 CSPNIRPITPDVTAEENENVTLSCRATGSPVPK-IKWIFKEKIIANISSGLANMNKRQYIIK--TINS--LSNLTIVAVT 218 (369)
Q Consensus 144 c~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~L~I~~v~ 218 (369)
.+|.+.. +..+.+.+|+.+.|.|.+.|.|.|. +.|++++..+..... .++.+. .... .+.|.|.+++
T Consensus 13 ~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~~L~I~~v~ 84 (122)
T 2cry_A 13 GPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTS-------GRYTVETISTEEGVISTLTISNIV 84 (122)
T ss_dssp SSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEE-------TTEEEEEEEETTEEEEEEECTTCC
T ss_pred cCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCC-------CCEEEEEecCCCceEEEEEEcCCC
Confidence 3455555 6778899999999999999999997 999999877653211 122221 1122 4589999999
Q ss_pred CCCC-EEEEEEEEeCCceEEEEEEEEEeecC
Q psy12695 219 MSDS-GIYTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 219 ~~D~-G~Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
.+|+ |.|.|.|.|..|.....+.|.|....
T Consensus 85 ~~D~~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 115 (122)
T 2cry_A 85 RADFQTIYNCTAWNSFGSDTEIIRLKEQGSE 115 (122)
T ss_dssp HHHHHSCEEEEEECSSCEEEEEECCCCSCSS
T ss_pred hhhCCceEEEEEECCCCeEEEEEEEEECCCC
Confidence 9999 99999999999999988888887654
No 95
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.25 E-value=6.5e-11 Score=88.13 Aligned_cols=92 Identities=18% Similarity=0.315 Sum_probs=70.1
Q ss_pred CCCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 144 CSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 144 c~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
.+|.+...+..+.+.+|+.++|.|.+.+. |.+.|++++..+.. ..++.+........|.|.+++.+|+|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~---------~~~~~~~~~~~~~~L~I~~v~~~D~G 75 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRD---------GGRYSLKQDGTRCELQIHDLSVADAG 75 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCS---------SSSCEEEEETTEEEEEESSCCTTTCS
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCC---------CCCEEEEecCCEEEEEECCCCcccCE
Confidence 45777777788999999999999999876 68999999876542 12333333444567999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecCCc
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKVETA 250 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~~~~ 250 (369)
.|+|.+.| ....+.|.|...+..
T Consensus 76 ~Y~C~a~n----~~~~~~l~V~~~p~~ 98 (108)
T 2dm7_A 76 EYSCMCGQ----ERTSATLTVRALPAR 98 (108)
T ss_dssp EEEEEETT----EEEEEECEEECCCSS
T ss_pred EEEEEEcC----CEEEEEEEEecCCHH
Confidence 99999944 567778888776543
No 96
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.24 E-value=5.6e-11 Score=87.91 Aligned_cols=88 Identities=18% Similarity=0.295 Sum_probs=64.4
Q ss_pred CCCccCCCCC-eeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 145 SPNIRPITPD-VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 145 ~p~i~~~~~~-~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
.|.+...+.. +.+.+|+.+.|.|.+ +.|.+.+.|++++..+... ..++.+........|.|.+++.+|+|
T Consensus 15 ~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~--------~~~~~~~~~~~~~~L~I~~v~~~D~G 85 (104)
T 1pd6_A 15 STAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMS--------GSKYIFESIGAKRTLTISQCSLADDA 85 (104)
T ss_dssp TSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCC--------SSSSEEEEETTEEEEEECSCSSSSCE
T ss_pred CCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCC--------CCeEEEEecCCEEEEEECCCCcccCE
Confidence 4556555555 889999999999999 7899999999999876532 01333333344558999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEe
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
.|.|.+. .....+.|.|.
T Consensus 86 ~Y~C~a~----~~~~~~~l~V~ 103 (104)
T 1pd6_A 86 AYQCVVG----GEKCSTELFVK 103 (104)
T ss_dssp EEEEEET----TEEECCEEEEE
T ss_pred EEEEEEC----CCcEEEEEEEe
Confidence 9999993 34444555553
No 97
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.24 E-value=1.6e-11 Score=101.73 Aligned_cols=95 Identities=20% Similarity=0.259 Sum_probs=84.5
Q ss_pred CceEEEecCCCCCccCCC--C--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQ--L--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKL 118 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~--~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 118 (369)
..+.++.+++.++.+|.. + ...++.|+|++|+|. +.+|.++++|++|+|++|+|+.+++.+|.++++|+.|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 357899999999988863 3 357999999999965 678999999999999999999999999999999999999
Q ss_pred cccceecccCCcccccCcCccc
Q psy12695 119 SGNPIQKITHEAFINVPKLNLE 140 (369)
Q Consensus 119 ~~N~l~~~~~~~f~~l~~l~~~ 140 (369)
++|.|+.+.+..|..+++|...
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L 131 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSL 131 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEE
T ss_pred CCCcCCeeCHHHhhcCCCCCEE
Confidence 9999999999999888876543
No 98
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=3.3e-12 Score=94.05 Aligned_cols=92 Identities=17% Similarity=0.161 Sum_probs=67.0
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+.++.+.+|+.+.|.|.+.+.| +.+.|++++..+...... ..++.+........|.|.+++.+|+|.|
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~-----~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 82 (101)
T 2edk_A 9 VLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSF-----KARYRFKKDGKRHILIFSDVVQEDRGRY 82 (101)
T ss_dssp CCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCS-----SCCCEEEECSSEEEEECSSCCGGGCSBE
T ss_pred CEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCc-----ceeEEEEECCCEEEEEECCCChhhCEEE
Confidence 4555667788999999999999999998 999999998766432210 0033333344456899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEeec
Q psy12695 226 TCRAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~~ 247 (369)
+|.|.|. ...+.|.|...
T Consensus 83 ~C~a~n~----~~~~~l~V~~~ 100 (101)
T 2edk_A 83 QVITNGG----QCEAELIVEEK 100 (101)
T ss_dssp EEECSSC----EECCBEEEECC
T ss_pred EEEEcCC----cEEEEEEEeCC
Confidence 9999872 33455665543
No 99
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.24 E-value=4.6e-11 Score=98.88 Aligned_cols=85 Identities=28% Similarity=0.396 Sum_probs=69.8
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcc-cCCCCCEEEEEEEE
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVA-VTMSDSGIYTCRAK 230 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~-v~~~D~G~Y~C~a~ 230 (369)
+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+......+.|.|.+ +..+|+|.|+|.|.
T Consensus 111 ~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~---------~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 181 (197)
T 2j8h_A 111 MGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN---------GHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAK 181 (197)
T ss_dssp BEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSS---------SSCEEEECSSEEEEECTTCCCGGGCEEEEEEEE
T ss_pred cCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecC---------CCEEEEEcCCceEEEEeCCCCcccCEeEEEEEE
Confidence 35567889999999999999999999999998776521 122333334567899999 99999999999999
Q ss_pred eCCceEEEEEEEEEe
Q psy12695 231 NGAGEVFTNISLNVI 245 (369)
Q Consensus 231 n~~g~~~~~~~l~v~ 245 (369)
|..|.....+.|.|.
T Consensus 182 N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 182 NRFGIDQKTVELDVA 196 (197)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred eCCCcEeEEEEEEEe
Confidence 999999998888875
No 100
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=2.2e-11 Score=91.96 Aligned_cols=95 Identities=19% Similarity=0.304 Sum_probs=72.1
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEE-eecceeeEEEcccCCCCCEEE
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK-TINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y 225 (369)
.+...+.++.+.+|+.+.|.|.+.|.|.|.+.|++++..+....... +. .......|.|.+++.+|+|.|
T Consensus 15 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~---------~~~~~~~~~~L~I~~v~~~D~G~Y 85 (115)
T 2cr6_A 15 HIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNE---------IDAQPGGYHVLTLRQLALKDSGTI 85 (115)
T ss_dssp EEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCC---------BCCBTTTBCCBEECSCCTTTCEEE
T ss_pred eEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEE---------EEEcCCCEEEEEEcCCChhhCEEE
Confidence 34455678899999999999999999999999999998765322111 11 112345799999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEeecCCcccCC
Q psy12695 226 TCRAKNGAGEVFTNISLNVIKVETAVAQP 254 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~~~~~~~~~ 254 (369)
+|. .|.....+.|.|...+.....+
T Consensus 86 ~C~----~g~~~~~~~L~V~~~p~~~~~~ 110 (115)
T 2cr6_A 86 YFE----AGDQRASAALRVTEKPSVFSRS 110 (115)
T ss_dssp EEE----ETTEECCEEEEEECCSSCCSSS
T ss_pred EEE----ECCeeEEEEEEEECCCceeccC
Confidence 999 4667777889998877654443
No 101
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.23 E-value=1.2e-10 Score=102.28 Aligned_cols=92 Identities=25% Similarity=0.437 Sum_probs=75.7
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+........|.|.+++.+|+|.
T Consensus 192 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~---------~~~~~~~~~~~~~L~i~~v~~~d~G~ 262 (284)
T 2rik_A 192 PPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSG---------KKYKIMSENFLTSIHILNVDSADIGE 262 (284)
T ss_dssp CCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBT---------TTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCC---------CCEEEEEcCCEEEEEEcCCCcccCEE
Confidence 355666677788999999999999999999999999999877532 12333334445789999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEe
Q psy12695 225 YTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
|+|.|.|..|.....+.|.|.
T Consensus 263 Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 263 YQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp EEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEeCCCceeEEEEEEEc
Confidence 999999999999999988875
No 102
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.23 E-value=8.2e-12 Score=123.77 Aligned_cols=97 Identities=24% Similarity=0.447 Sum_probs=71.9
Q ss_pred CeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccc
Q psy12695 39 CECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRE 115 (369)
Q Consensus 39 C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~ 115 (369)
|.|. ...++|++++|+.||..+|..++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++.+|.++++|+.
T Consensus 2 C~~~----~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 77 (680)
T 1ziw_A 2 CTVS----HEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKV 77 (680)
T ss_dssp --CB----SSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCE
T ss_pred ceeE----CCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCE
Confidence 7777 357999999999999999999999999999854 456777777777777777777776666766777777
Q ss_pred ccccccceecccCCcccccCcCcc
Q psy12695 116 LKLSGNPIQKITHEAFINVPKLNL 139 (369)
Q Consensus 116 L~L~~N~l~~~~~~~f~~l~~l~~ 139 (369)
|+|++|.|+.++++.|.++++|..
T Consensus 78 L~L~~n~l~~l~~~~~~~l~~L~~ 101 (680)
T 1ziw_A 78 LNLQHNELSQLSDKTFAFCTNLTE 101 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCSE
T ss_pred EECCCCccCccChhhhccCCCCCE
Confidence 777777777666666666555443
No 103
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.22 E-value=9.9e-11 Score=87.87 Aligned_cols=83 Identities=20% Similarity=0.438 Sum_probs=63.6
Q ss_pred eeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCCc
Q psy12695 155 VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG 234 (369)
Q Consensus 155 ~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g 234 (369)
+.+.+|+.+.|.|.+. .|.+.+.|++++..+.... ++.+........|.|.+++.+|+|.|.|.+.|
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~---------~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n--- 89 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESP---------ALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD--- 89 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBT---------TBEEEECSSEEEEEESSCCTTTCEEEEEESSS---
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCC---------CEEEEECCCEEEEEECCCCcccCEEEEEEEec---
Confidence 6788999999999995 7889999999997764321 22222223346899999999999999999998
Q ss_pred eEEEEEEEEEeecCCcc
Q psy12695 235 EVFTNISLNVIKVETAV 251 (369)
Q Consensus 235 ~~~~~~~l~v~~~~~~~ 251 (369)
....+.|.|...+...
T Consensus 90 -~~~~~~l~V~~~p~~~ 105 (113)
T 2cpc_A 90 -ESASFTVTVTEPPVRI 105 (113)
T ss_dssp -CEEEEEEEEECCCCCC
T ss_pred -CcEEEEEEEecCCchh
Confidence 4567788887766443
No 104
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.22 E-value=1.5e-11 Score=93.12 Aligned_cols=96 Identities=26% Similarity=0.464 Sum_probs=66.8
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEE-----cccCC
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTI-----VAVTM 219 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I-----~~v~~ 219 (369)
+|.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+....... ...... ...+.+.+ .+++.
T Consensus 9 pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~i~~~~v~~ 81 (117)
T 2v9t_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDP----RSHRML---LPSGSLFFLRIVHGRKSR 81 (117)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCS----SCSEEE---CTTSCEEESSCCCBTTBC
T ss_pred CCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCC----cceeEE---ecCCcEEEEEEEeCCCCc
Confidence 4666667788899999999999999999999999999988765322110 001111 11223333 35689
Q ss_pred CCCEEEEEEEEeCCceEEEE-EEEEEeec
Q psy12695 220 SDSGIYTCRAKNGAGEVFTN-ISLNVIKV 247 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~g~~~~~-~~l~v~~~ 247 (369)
+|+|.|.|.|.|..|..... +.+.+...
T Consensus 82 ~D~G~Y~C~a~N~~G~~~s~~~~l~~~~~ 110 (117)
T 2v9t_A 82 PDEGVYVCVARNYLGEAVSHDASLEVAAA 110 (117)
T ss_dssp SSCEEEEEEEEETTEEEECCCEEEEEC--
T ss_pred CcCEEEEEEEEeCccceEeeeEEEEhhhh
Confidence 99999999999999986544 66666543
No 105
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.20 E-value=5e-11 Score=92.93 Aligned_cols=97 Identities=26% Similarity=0.379 Sum_probs=66.8
Q ss_pred ccccCCCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeeccccccc-CCcceEEEE---eecceeeEEEc
Q psy12695 140 EDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLAN-MNKRQYIIK---TINSLSNLTIV 215 (369)
Q Consensus 140 ~~~~c~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~L~I~ 215 (369)
....++|.+...+..+.+.+|+.++|.|.+.|.|.|.+.|++++..+......... ....++... .....+.|.|.
T Consensus 16 ~~~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 95 (137)
T 3qr2_A 16 PRGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISID 95 (137)
T ss_dssp -----CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEEC
T ss_pred CCCCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEEC
Confidence 34556788888899999999999999999999999999999976543211000000 001111111 11235689999
Q ss_pred ccCCCCCEEEEEEEEeCCceE
Q psy12695 216 AVTMSDSGIYTCRAKNGAGEV 236 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~~g~~ 236 (369)
+++.+|+|.|.|.|.|..|..
T Consensus 96 ~v~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 96 TLVEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp SCCGGGCEEEEEEEECCTTSS
T ss_pred CCCcccCEEEEEEEEecCCcc
Confidence 999999999999999999875
No 106
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.20 E-value=1.6e-10 Score=96.65 Aligned_cols=88 Identities=27% Similarity=0.451 Sum_probs=71.9
Q ss_pred CCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEee-cceeeEEEcccCCCCCEEEEEEE
Q psy12695 151 ITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTI-NSLSNLTIVAVTMSDSGIYTCRA 229 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a 229 (369)
.+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++.+... .....|.|.+++.+|+|.|.|.|
T Consensus 123 ~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~---------~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 193 (212)
T 2r15_A 123 LPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTD---------HCNLKFEAGRTAYFTINGVSTADSGKYGLVV 193 (212)
T ss_dssp CCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCS---------SEEEEEETTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCC---------CEEEEEcCCCEEEEEEcCcchHHCeEEEEEE
Confidence 3456788999999999999999999999999998775321 2222222 34568999999999999999999
Q ss_pred EeCCceEEEEEEEEEeec
Q psy12695 230 KNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 230 ~n~~g~~~~~~~l~v~~~ 247 (369)
.|..|.....+.|.|..+
T Consensus 194 ~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 194 KNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp EETTEEEEEEEEEEEECC
T ss_pred EcCCCcEEEEEEEEEEcc
Confidence 999999999999988753
No 107
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.20 E-value=4e-11 Score=101.59 Aligned_cols=97 Identities=18% Similarity=0.291 Sum_probs=80.4
Q ss_pred ceEEEecCCCCCccC-CCC---CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIP-EQL---DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLS 119 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip-~~~---~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 119 (369)
.+.++.++|+++.++ ... ...++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++.+|.++++|+.|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 457999999999874 332 357899999999854 6689999999999999999999999889999999999999
Q ss_pred ccceecccCCcccccCcCcccccc
Q psy12695 120 GNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 120 ~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
+|.|+.+.+..|..+++|...++.
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~ 137 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLY 137 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECT
T ss_pred CCcCCeECHhHcCCCccCCEEECC
Confidence 999999988888888887665443
No 108
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.20 E-value=1.4e-10 Score=95.91 Aligned_cols=97 Identities=30% Similarity=0.437 Sum_probs=77.4
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEE-eecceeeEEEcccCCCCCE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK-TINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D~G 223 (369)
+|.+...+..+.+.+|+.+.|.|.+.|.|.+.+.|++++..+... ..++.+. ...+...|.|.+++.+|+|
T Consensus 4 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~--------~~~~~~~~~~~~~~~L~i~~~~~~d~G 75 (197)
T 2j8h_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIAD--------GLKYRIQEFKGGYHQLIIASVTDDDAT 75 (197)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCC--------SSSEEEEEETTTEEEEEECSCCGGGCS
T ss_pred CCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccC--------CCcEEEEEcCCCEEEEEECcCCHHhCE
Confidence 456666778899999999999999999999999999998776531 1122222 2233458999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|.|.+.|..|.....+.|.|...+.
T Consensus 76 ~Y~C~~~n~~g~~~~~~~l~V~~~p~ 101 (197)
T 2j8h_A 76 VYQVRATNQGGSVSGTASLEVEVPAK 101 (197)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEECCCceeEEEEEEEcCCCc
Confidence 99999999999988888888876543
No 109
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.20 E-value=2.6e-11 Score=123.07 Aligned_cols=94 Identities=23% Similarity=0.293 Sum_probs=67.0
Q ss_pred CeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCC-cccccCCcccccccccc
Q psy12695 39 CECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYN-QIQFVPSHILDSILELR 114 (369)
Q Consensus 39 C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N-~l~~i~~~~f~~l~~L~ 114 (369)
|.|. ...++|++++|+.||. +|..++.|+|++|+|. +.+|.++++|+.|||++| .+..|++.+|.++++|+
T Consensus 2 C~~~----~~~~dcs~~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~ 76 (844)
T 3j0a_A 2 CSFD----GRIAFYRFCNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLR 76 (844)
T ss_dssp CBTT----TEEEEESCCCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCC
T ss_pred ceEe----ceEEEccCCCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCC
Confidence 7776 4689999999999999 9999999999999944 455666666666666666 34455556666666666
Q ss_pred cccccccceecccCCcccccCcC
Q psy12695 115 ELKLSGNPIQKITHEAFINVPKL 137 (369)
Q Consensus 115 ~L~L~~N~l~~~~~~~f~~l~~l 137 (369)
.|+|++|.|+.+.++.|.++++|
T Consensus 77 ~L~Ls~N~l~~~~p~~~~~l~~L 99 (844)
T 3j0a_A 77 ILDLGSSKIYFLHPDAFQGLFHL 99 (844)
T ss_dssp EEECTTCCCCEECTTSSCSCSSC
T ss_pred EEECCCCcCcccCHhHccCCccc
Confidence 66666666666655555555554
No 110
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.20 E-value=2e-10 Score=100.75 Aligned_cols=98 Identities=28% Similarity=0.383 Sum_probs=80.4
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
+|.+...+..+.+.+|+.++|.|.+.|.|.+.+.|++++..+... .++.+........|.|.+++.+|+|.
T Consensus 5 pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~---------~~~~~~~~~~~~~L~i~~v~~~d~G~ 75 (284)
T 2rik_A 5 PPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPG---------GNYKMTLVENTATLTVLKVTKGDAGQ 75 (284)
T ss_dssp CCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSS---------SSEEEEEETTEEEEEESSCCGGGCEE
T ss_pred CCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCC---------CcEEEEEcCCEEEEEEecCCcccCEE
Confidence 455666678889999999999999999999999999999876421 12333344556899999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecCCcc
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVETAV 251 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~~~~ 251 (369)
|.|.+.|..|.....+.|.|...+...
T Consensus 76 Y~C~~~n~~g~~~~~~~l~V~~~p~~~ 102 (284)
T 2rik_A 76 YTCYASNVAGKDSCSAQLGVQEPPRFI 102 (284)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCCEEE
T ss_pred EEEEEEECCceEEEEEEEEccCCCccc
Confidence 999999999999889999998776543
No 111
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=2.4e-10 Score=85.28 Aligned_cols=99 Identities=16% Similarity=0.184 Sum_probs=70.4
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeeccc-ccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISS-GLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
|.+...+.++.+.+|+.+.|.|.+.+ .|.+.|+++|..+..... ........++.+........|.|.+++.+|+|.
T Consensus 9 ~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~ 86 (112)
T 2e6q_A 9 ARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGA 86 (112)
T ss_dssp CCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSE
T ss_pred cEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCcc
Confidence 45666778999999999999999998 778999999988764320 000001114444333345689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
|+|...+ .....+.|.|...|.
T Consensus 87 Y~~~~~~---~~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 87 LVGFSCP---GVQDSAALTIQESSG 108 (112)
T ss_dssp EEEEEET---TEEEEEEEEEECSSC
T ss_pred EEEEEEC---CeeEEEEEEEeCCCc
Confidence 9875543 345678898887664
No 112
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.19 E-value=1.1e-10 Score=98.14 Aligned_cols=96 Identities=21% Similarity=0.311 Sum_probs=77.1
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+ ..+.++.+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ..++.+......+.|.|.++..+|+|.|
T Consensus 20 P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~-------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 91 (215)
T 3mtr_A 20 PKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSN-------YSNIKIYNTPSASYLEVTPDSENDFGNY 91 (215)
T ss_dssp EEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSS-------SCSEEEEEETTEEEEEECCCSGGGCEEE
T ss_pred Ccc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCC-------CccEEEecCCCeeEEEEecCChhhCeEE
Confidence 444 35667889999999999999999999999999998764321 1233333344568999999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEeecCC
Q psy12695 226 TCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|.|.|..|.....+.+.|...+.
T Consensus 92 ~C~a~n~~g~~~~~~~l~v~~~P~ 115 (215)
T 3mtr_A 92 NCTAVNRIGQESLEFILVQADTPS 115 (215)
T ss_dssp EEEEECSSCEEEEEEEEEECCCCC
T ss_pred EEEEEECCCceEEEEEEEECCCCC
Confidence 999999999999999998876553
No 113
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.19 E-value=2.8e-10 Score=93.68 Aligned_cols=95 Identities=22% Similarity=0.418 Sum_probs=73.9
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEe--CCeEeeecccccccCCcceEEEEeecceeeEEEcccC-CCC
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIF--KEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVT-MSD 221 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~-~~D 221 (369)
.|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.... ...++.+......+.|.|.+++ .+|
T Consensus 92 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~------~~~~~~~~~~~~~~~L~i~~~~~~~d 165 (190)
T 2wv3_A 92 APDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISN------SSGRFFIINKENYTELNIVNLQITED 165 (190)
T ss_dssp CCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCC------TTSCEEEEECSSEEEEEECSCCTTTS
T ss_pred CCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeec------CCCeEEEecCCCeeEEEEEeccccCC
Confidence 4555555667789999999999999999999999999 555443211 1223444334445689999999 799
Q ss_pred CEEEEEEEEeCCceEEEEEEEEEe
Q psy12695 222 SGIYTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 222 ~G~Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
+|.|.|.|.|..|.....+.|.|.
T Consensus 166 ~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 166 PGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CEEEEEEEEecCCcceeEEEEEEE
Confidence 999999999999999998888875
No 114
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.18 E-value=3.3e-10 Score=92.67 Aligned_cols=97 Identities=21% Similarity=0.402 Sum_probs=74.7
Q ss_pred CCCCccCCCCCeeeccCCeEEEEEEeeCCC-CCeEEEEe---CCeEeeecccccccCCcceEEEEeecceeeEEEcccC-
Q psy12695 144 CSPNIRPITPDVTAEENENVTLSCRATGSP-VPKIKWIF---KEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVT- 218 (369)
Q Consensus 144 c~p~i~~~~~~~~~~~G~~~~l~C~~~g~p-~p~i~W~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~- 218 (369)
..|.+...+....+.+|+.+.|.|.+.|.| .|.+.|++ ++....... ...++.+........|.|.+++
T Consensus 82 ~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~L~i~~v~~ 155 (184)
T 3b5h_A 82 GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNG------SESRFFVSSSQGRSELHIENLNM 155 (184)
T ss_dssp CSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTT------GGGTEEEEEETTEEEEEECSCCT
T ss_pred cCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecC------CCCEEEEEecCCeeEEEEeeccc
Confidence 356666666677889999999999999999 79999999 444332111 1134444444556789999999
Q ss_pred CCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy12695 219 MSDSGIYTCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 219 ~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 246 (369)
.+|+|.|.|.|.|..|.....+.|.|..
T Consensus 156 ~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 156 EADPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp TTSSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred cccCceEEEEEEeCCCcceEEEEEEEec
Confidence 8999999999999999999888888853
No 115
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.18 E-value=1.3e-10 Score=95.87 Aligned_cols=97 Identities=34% Similarity=0.526 Sum_probs=78.2
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+.++.+.+|+.+.|.|.+.|.|.+.+.|++++..+... .++.+........|.|.+++.+|+|.
T Consensus 7 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~---------~~~~~~~~~~~~~L~i~~~~~~d~G~ 77 (197)
T 3lcy_A 7 APGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQS---------RKYKMSSDGRTHTLTVMTEEQEDEGV 77 (197)
T ss_dssp EEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCC---------SSEEEEESSSEEEEEEECCSGGGCEE
T ss_pred CCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCC---------ccEEEEeCCCEEEEEEecCCccCCEE
Confidence 355666678899999999999999999999999999999876431 22333333445589999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecCCc
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVETA 250 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~~~ 250 (369)
|+|.+.|..|.....+.+.|...+..
T Consensus 78 Y~C~~~n~~~~~~~~~~l~v~~~p~~ 103 (197)
T 3lcy_A 78 YTCIATNEVGEVETSSKLLLQATPQF 103 (197)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEEEE
T ss_pred EEEEEECCCCceeEEEEEEEEcCCCC
Confidence 99999999999888888888766543
No 116
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.17 E-value=1.1e-10 Score=96.22 Aligned_cols=95 Identities=27% Similarity=0.427 Sum_probs=76.0
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+..... .++..........|.|.+++.+|+|.
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~-------~~~~~~~~~~~~~L~i~~~~~~d~G~ 77 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTL-------PGVQISFSDGRAKLTIPAVTKANSGR 77 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTS-------TTCEEEEETTEEEEEESSCCGGGCEE
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccC-------CceEEEeCCCEEEEEECCCCcccCEE
Confidence 35566667888999999999999999999999999998876543221 12223334556789999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEee
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~ 246 (369)
|.|.+.|..|.....+.+.|..
T Consensus 78 Y~C~~~n~~~~~~~~~~l~v~~ 99 (194)
T 2a38_A 78 YSLKATNGSGQATSTAELLVKA 99 (194)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEcCCceEeEEEEEEEcc
Confidence 9999999999988888888874
No 117
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.17 E-value=1.3e-10 Score=95.76 Aligned_cols=90 Identities=28% Similarity=0.382 Sum_probs=72.5
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++..........|.|.+++.+|+|.|
T Consensus 104 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~---------~~~~~~~~~~~~~L~i~~~~~~d~G~Y 174 (194)
T 2a38_A 104 PNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSS---------LDFQISQEGDLYSLLIAEAYPEDSGTY 174 (194)
T ss_dssp EEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCS---------SSEEEEEETTEEEEEEEEECGGGCEEE
T ss_pred CEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCC---------CcEEEEEcCCEEEEEECCCChhcCeEE
Confidence 44444566788999999999999999999999999999876431 123333334455899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEE
Q psy12695 226 TCRAKNGAGEVFTNISLNV 244 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v 244 (369)
+|.|.|..|.....+.|.|
T Consensus 175 ~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 175 SVNATNSVGRATSTAELLV 193 (194)
T ss_dssp EEEEEETTEEEEEEEEEEE
T ss_pred EEEEEeCCCceEEEEEEEE
Confidence 9999999999988888876
No 118
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.17 E-value=3.4e-10 Score=94.96 Aligned_cols=96 Identities=25% Similarity=0.450 Sum_probs=76.8
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEe-ecceeeEEEcccCC-CCC
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT-INSLSNLTIVAVTM-SDS 222 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~I~~v~~-~D~ 222 (369)
+|.+...+.++.+.+|+.+.|.|.+.|.|.+.+.|++++..+... ..++.+.. ..+...|.|.+++. +|+
T Consensus 6 pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~--------~~~~~~~~~~~~~~~L~i~~v~~~~d~ 77 (212)
T 2yd1_A 6 PPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGT--------QSRYTVLEQPGGISILRIEPVRAGRDD 77 (212)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTT--------STTEEEEEETTTEEEEEESSCCTTTTC
T ss_pred CCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCC--------cceeEEEEcCCCeEEEEEEecCCCCcC
Confidence 466677788899999999999999999999999999998776411 12222222 23347899999999 999
Q ss_pred EEEEEEEEeCCce-EEEEEEEEEeecC
Q psy12695 223 GIYTCRAKNGAGE-VFTNISLNVIKVE 248 (369)
Q Consensus 223 G~Y~C~a~n~~g~-~~~~~~l~v~~~~ 248 (369)
|.|.|.+.|..|. ....+.|.|...+
T Consensus 78 G~Y~C~~~n~~g~~~~~~~~l~V~~~~ 104 (212)
T 2yd1_A 78 APYECVAENGVGDAVSADATLTIYEGD 104 (212)
T ss_dssp SEEEEEEECSSSCEEEEEEEEEEECTT
T ss_pred ceEEEEEEeCCCCeEEeeEEEEEeccc
Confidence 9999999999998 7888889887653
No 119
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.16 E-value=2.6e-10 Score=95.69 Aligned_cols=95 Identities=33% Similarity=0.448 Sum_probs=75.2
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEccc-CCCCCE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAV-TMSDSG 223 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v-~~~D~G 223 (369)
+|.+...+.++.+.+|+.+.|.|.+.|.|.+.+.|++++..+... ..............|.|.++ ..+|+|
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~--------~~~~~~~~~~~~~~L~i~~v~~~~d~G 77 (212)
T 2yd6_A 6 PPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQ--------RFEVIEFDDGSGSVLRIQPLRTPRDEA 77 (212)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCT--------TEEEEEEGGGTEEEEEECSCCTTTTCE
T ss_pred CCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCC--------ceeEEEEcCCCceEEEEeccCCCCCCe
Confidence 456666778899999999999999999999999999998776421 11111111224567999999 599999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeec
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~ 247 (369)
.|+|.+.|..|.....+.|.|...
T Consensus 78 ~Y~C~a~n~~g~~~~~~~l~V~~~ 101 (212)
T 2yd6_A 78 IYECVASNNVGEISVSTRLTVLRE 101 (212)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECG
T ss_pred EEEEEEEcCCCcEEEEEEEEEecc
Confidence 999999999999888889988764
No 120
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.16 E-value=1.9e-10 Score=111.64 Aligned_cols=100 Identities=24% Similarity=0.394 Sum_probs=80.4
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
+|.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+........|.|.++..+|+|.
T Consensus 384 ~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~---------~~~~~~~~~~~~~L~i~~v~~~D~G~ 454 (570)
T 3b43_A 384 PPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSG---------KKYKIMSENFLTSIHILNVDSADIGE 454 (570)
T ss_dssp CCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSS---------SSEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCC---------CCEEEEEcCCEEEEEECCCChhhCEE
Confidence 355556677888899999999999999999999999999876421 12333333445689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecCCcccC
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVETAVAQ 253 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~ 253 (369)
|.|.|.|..|.....+.|.|..+|.....
T Consensus 455 Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~ 483 (570)
T 3b43_A 455 YQCKASNDVGSDTCVGSITLKAPPRFVKK 483 (570)
T ss_dssp EEEEEECSSCEEEEEEEEEECCCCEEEEC
T ss_pred EEEEEEECCCeEEEEEEEEeccCCccccc
Confidence 99999999999999999999877654433
No 121
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.16 E-value=7.8e-11 Score=96.16 Aligned_cols=96 Identities=23% Similarity=0.333 Sum_probs=84.3
Q ss_pred CceEEEecCCCCCccCCCC---CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQL---DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLS 119 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~---~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 119 (369)
..+.++.++++++.+|... ...++.|+|++|+|. +..|.++++|+.|+|++|+|+.+++..|..+++|+.|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 108 (177)
T 2o6r_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALD 108 (177)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECc
Confidence 3578999999999988754 357999999999965 5678999999999999999999999999999999999999
Q ss_pred ccceecccCCcccccCcCcccc
Q psy12695 120 GNPIQKITHEAFINVPKLNLED 141 (369)
Q Consensus 120 ~N~l~~~~~~~f~~l~~l~~~~ 141 (369)
+|.|+.++...|..+++|...+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~ 130 (177)
T 2o6r_A 109 TNQLKSVPDGIFDRLTSLQKIW 130 (177)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCcceEeCHHHhcCCcccCEEE
Confidence 9999999998888887765443
No 122
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.16 E-value=3.3e-11 Score=118.13 Aligned_cols=97 Identities=16% Similarity=0.142 Sum_probs=86.0
Q ss_pred CceEEEecCCCCCccCCC-C--CCCccEEEeeccee---ChhhccCCcccCeeeccCCcccccCCccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQ-L--DVGTQVLDLSDNFL---DRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLS 119 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~-~--~~~~~~L~l~~n~i---~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 119 (369)
..+.++.++|.|+.+|.. + -..+++|+|++|+| .+++|.+|++|++|+|++|+|+.+++++|.++.+|+.|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 357899999999999864 3 25799999999994 57899999999999999999999999999999999999999
Q ss_pred ccceecccCCcccccCcCccccc
Q psy12695 120 GNPIQKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 120 ~N~l~~~~~~~f~~l~~l~~~~~ 142 (369)
+|.|+.+++..|.++++|...++
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCcCCCCChhhhhcCcccCeecc
Confidence 99999999999998888665443
No 123
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.16 E-value=2.5e-10 Score=85.02 Aligned_cols=84 Identities=20% Similarity=0.302 Sum_probs=60.0
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCe-----EeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKEK-----IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
..|..+.+.+|++++|.|.+.+.|.+.+.|+++.. .+.............++.+........|.|.+++.+|+|.
T Consensus 6 q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 85 (108)
T 1jhl_L 6 QSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFAM 85 (108)
T ss_dssp EECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCCSE
T ss_pred ccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHCEE
Confidence 44667889999999999999999989999998541 1221111100011235555444456789999999999999
Q ss_pred EEEEEEeCC
Q psy12695 225 YTCRAKNGA 233 (369)
Q Consensus 225 Y~C~a~n~~ 233 (369)
|.|.+.|..
T Consensus 86 Y~C~~~n~~ 94 (108)
T 1jhl_L 86 YICQQHNEY 94 (108)
T ss_dssp EEEEECSSS
T ss_pred EEEEEccCC
Confidence 999999874
No 124
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.15 E-value=6.2e-11 Score=104.83 Aligned_cols=91 Identities=27% Similarity=0.330 Sum_probs=45.0
Q ss_pred eEEEecCCCCCccCCC-CCCCccEEEeecceeC--hhhccCCcccCeeeccCCcccccCCccccccccccccccccccee
Q psy12695 48 ETVLCKAKNFTTIPEQ-LDVGTQVLDLSDNFLD--RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQ 124 (369)
Q Consensus 48 ~~~~c~~~~l~~ip~~-~~~~~~~L~l~~n~i~--~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~ 124 (369)
+.++.+++.++.+|.. -...++.|+|++|+|. +..|.++++|+.|+|++|+|+.+++++|.++++|+.|+|++|.|+
T Consensus 58 ~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 137 (290)
T 1p9a_G 58 TQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137 (290)
T ss_dssp CEEECTTSCCCEEECCSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC
T ss_pred CEEECCCCccCcccCCCCCCcCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC
Confidence 4455555555544431 1234555555555543 233445555555555555555555555555555555555555555
Q ss_pred cccCCcccccCcCc
Q psy12695 125 KITHEAFINVPKLN 138 (369)
Q Consensus 125 ~~~~~~f~~l~~l~ 138 (369)
.++++.|..+++|.
T Consensus 138 ~~~~~~~~~l~~L~ 151 (290)
T 1p9a_G 138 TLPPGLLTPTPKLE 151 (290)
T ss_dssp CCCTTTTTTCTTCC
T ss_pred ccChhhcccccCCC
Confidence 55555554444443
No 125
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.15 E-value=2.9e-10 Score=93.97 Aligned_cols=100 Identities=18% Similarity=0.279 Sum_probs=75.9
Q ss_pred CCccCCCCCeeeccCCeEEEEEEee-CCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecc-------eeeEEEccc
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRAT-GSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINS-------LSNLTIVAV 217 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~L~I~~v 217 (369)
|.+...+.+..+.+|+.+.|.|.+. |.|.+.+.|++++..+..... .++.+..... .+.|.|.++
T Consensus 3 ~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~-------~~~~~~~~~~~~~~~~~~~~L~i~~~ 75 (195)
T 2c5d_C 3 SPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADS-------TQTQVPLGEDEQDDWIVVSQLRITSL 75 (195)
T ss_dssp CSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEE-------EEEEEECSSSTTSEEEEEEEEEESSC
T ss_pred CeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCC-------CceEEEEccccccceeeccEEEEEec
Confidence 5666778899999999999999999 999999999999877653211 1122222111 468999999
Q ss_pred CCCCCEEEEEEEEeCCceEEEE-EEEEEeecCCccc
Q psy12695 218 TMSDSGIYTCRAKNGAGEVFTN-ISLNVIKVETAVA 252 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~g~~~~~-~~l~v~~~~~~~~ 252 (369)
+.+|+|.|.|.+.|..|..... +.|.|...+....
T Consensus 76 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~ 111 (195)
T 2c5d_C 76 QLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLE 111 (195)
T ss_dssp CSTTCEEEEEEEEETTEEEECCCEEEEECCSCEEEE
T ss_pred cccCCcEEEEEEEeCCCceecccEEEEEecCCeEEc
Confidence 9999999999999998875444 7888877664433
No 126
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.13 E-value=9.2e-11 Score=107.97 Aligned_cols=88 Identities=32% Similarity=0.595 Sum_probs=72.4
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+ ..+.|.|.++..+|+|.|
T Consensus 296 P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~---------~~~~~----~~~~L~i~~v~~~D~G~Y 362 (384)
T 3kld_A 296 PNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTR---------DRIQI----EQGTLNITIVNLSDAGMY 362 (384)
T ss_dssp EEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCB---------TTEEE----ETTEEEESSCCGGGCEEE
T ss_pred CccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCC---------ccEEE----eCCEEEEeecChhhCEEE
Confidence 45555667888999999999999999999999999999876421 12221 235899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEee
Q psy12695 226 TCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~ 246 (369)
+|.|.|..|.....+.|.|..
T Consensus 363 ~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 363 QCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp EEEEEETTEEEEEEEEEEEC-
T ss_pred EEEEEeCCceEEeceEEEEec
Confidence 999999999999999998863
No 127
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.13 E-value=2.4e-11 Score=101.60 Aligned_cols=85 Identities=16% Similarity=0.209 Sum_probs=56.7
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEE
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRA 229 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 229 (369)
..+....+.+|+.++|.|.+.|.|.|.|.|+++++.+..... ...++.+........+.|.+++.+|+|.|+|.|
T Consensus 111 ~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~-----~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A 185 (203)
T 4fa8_A 111 VHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTA-----ANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVG 185 (203)
T ss_dssp EEEEECCSSCSCCEEEEEEEEEESCCEEEECCC-----------------CCEECTTSCEEEEEEEEECSSCCCCEEEEE
T ss_pred ecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCccc-----ccceEEEeCCCCEEEEEECCCCHHHCEEEEEEE
Confidence 345567788999999999999999999999987765432111 111222221122234566789999999999999
Q ss_pred EeCCceEEEE
Q psy12695 230 KNGAGEVFTN 239 (369)
Q Consensus 230 ~n~~g~~~~~ 239 (369)
.|..|.+...
T Consensus 186 ~N~~G~a~~v 195 (203)
T 4fa8_A 186 KNDKEEAHGV 195 (203)
T ss_dssp ESSSCEEEEE
T ss_pred EcCCCEEEEE
Confidence 9999987653
No 128
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.12 E-value=4.2e-10 Score=94.42 Aligned_cols=97 Identities=26% Similarity=0.373 Sum_probs=71.2
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+..... ..++........+.|.|.+++.+|+|.|
T Consensus 109 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 182 (212)
T 2yd6_A 109 PTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNN------NGRIKQLRSESIGALQIEQSEESDQGKY 182 (212)
T ss_dssp CEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------------CCEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred ceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCC------CceEEEEecCCeEEEEEcCCCcccCEEE
Confidence 4444456677889999999999999999999999999987653211 1123333334568999999999999999
Q ss_pred EEEEEeCCceEEE-EEEEEEeecC
Q psy12695 226 TCRAKNGAGEVFT-NISLNVIKVE 248 (369)
Q Consensus 226 ~C~a~n~~g~~~~-~~~l~v~~~~ 248 (369)
+|.|.|..|.... .+.|.|...+
T Consensus 183 ~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 183 ECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp EEEEEETTEEEECCCEEEEEEC--
T ss_pred EEEEECCCCccccccccEEEEecc
Confidence 9999999998654 4677776544
No 129
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.12 E-value=1.7e-10 Score=96.28 Aligned_cols=96 Identities=26% Similarity=0.266 Sum_probs=70.6
Q ss_pred CeeeccCCeEEEEEE---eeCCCCCeEEEEeCCeEeee-----ccccc---ccCCcceEEEEeecceeeEEEcccCCCCC
Q psy12695 154 DVTAEENENVTLSCR---ATGSPVPKIKWIFKEKIIAN-----ISSGL---ANMNKRQYIIKTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~---~~g~p~p~i~W~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 222 (369)
.+++..|+.++|.|. +.+.|.|.|.|++++..... ..... ......++......+...|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 578899999999995 67889999999997632111 00000 00112234444555677899999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 223 GIYTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 223 G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
|.|.|.|.|..|.....+.|.|..++.
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~~ 108 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPLT 108 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEE
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCce
Confidence 999999999999999999999977654
No 130
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.11 E-value=1.8e-10 Score=94.76 Aligned_cols=90 Identities=28% Similarity=0.476 Sum_probs=69.9
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.... ++.. ...+.|.|.++..+|+|.|
T Consensus 101 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~---------~~~~---~~~~~L~i~~~~~~d~G~Y 168 (192)
T 2iep_A 101 PKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENS---------RIAV---LESGSLRIHNVQKEDAGQY 168 (192)
T ss_dssp EEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCS---------SEEE---CTTSCEEESSCCGGGCEEE
T ss_pred CccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCC---------cEEE---ecCCcEEEecCChhhCEEE
Confidence 444445667888999999999999999999999999987665321 1111 1245799999999999999
Q ss_pred EEEEEeCCceEE-EEEEEEEeec
Q psy12695 226 TCRAKNGAGEVF-TNISLNVIKV 247 (369)
Q Consensus 226 ~C~a~n~~g~~~-~~~~l~v~~~ 247 (369)
+|.|.|..|... ..+.|.|..+
T Consensus 169 ~C~a~n~~g~~~s~~~~l~V~~p 191 (192)
T 2iep_A 169 RCVAKNSLGTAYSKLVKLEVEVF 191 (192)
T ss_dssp EEEEEETTEEEECCCEEEEEEC-
T ss_pred EEEEEcCCCcEEEEEEEEEEEeC
Confidence 999999999874 4577877654
No 131
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.11 E-value=1.6e-10 Score=99.85 Aligned_cols=97 Identities=26% Similarity=0.326 Sum_probs=79.1
Q ss_pred ceEEEecCCCCCccCCCC---CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQL---DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG 120 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~---~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 120 (369)
.+.++.+++.++.++... ...++.|+|++|+|. +..|.++++|+.|+|++|+|+.+++..|..+++|+.|+|++
T Consensus 61 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 140 (251)
T 3m19_A 61 LTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNT 140 (251)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcC
Confidence 568889999998877643 357889999999865 56788889999999999999998888888888999999999
Q ss_pred cceecccCCcccccCcCcccccc
Q psy12695 121 NPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 121 N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
|.|+.++++.|..+++|...++.
T Consensus 141 N~l~~~~~~~~~~l~~L~~L~L~ 163 (251)
T 3m19_A 141 NQLQSIPAGAFDKLTNLQTLSLS 163 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECC
T ss_pred CcCCccCHHHcCcCcCCCEEECC
Confidence 99998888888887776655443
No 132
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.11 E-value=6.2e-10 Score=102.26 Aligned_cols=101 Identities=29% Similarity=0.418 Sum_probs=77.6
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeC--CeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFK--EKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
|.+.. +.+..+.+|+.+.|.|.+.|.|.|.|.|+++ +..+...... ...++.+......+.|.|.+++.+|+|
T Consensus 2 P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~L~i~~v~~~D~G 76 (389)
T 2jll_A 2 PHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKS----LDGRIEVKGQHGSSSLHIKDVKLSDSG 76 (389)
T ss_dssp CEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CC----SSSSEEEEECSSEEEEEEESCCGGGCE
T ss_pred CeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCC----CCCeEEEeccCCcceEEEcccChhhCE
Confidence 34443 5677888999999999999999999999999 7665431110 122344433345679999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecCCcc
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKVETAV 251 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~~~~~ 251 (369)
.|.|.|.|..|..+..+.|.|...|...
T Consensus 77 ~Y~C~a~n~~g~~~~~~~l~V~~~P~~~ 104 (389)
T 2jll_A 77 RYDCEAASRIGGHQKSMYLDIEYAPKFI 104 (389)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEEEEEEC
T ss_pred EEEEEEEeCCCCcceEEEEEEEeCCEEe
Confidence 9999999999999999999998766543
No 133
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.11 E-value=2.2e-10 Score=87.34 Aligned_cols=105 Identities=24% Similarity=0.364 Sum_probs=70.9
Q ss_pred ccCCCCccCCCCCeeeccCCeEEEEEEeeCCCC----CeEEEEeCC-------eEeeecccccc-----cCCcceEEEEe
Q psy12695 142 FACSPNIRPITPDVTAEENENVTLSCRATGSPV----PKIKWIFKE-------KIIANISSGLA-----NMNKRQYIIKT 205 (369)
Q Consensus 142 ~~c~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~----p~i~W~~~~-------~~~~~~~~~~~-----~~~~~~~~~~~ 205 (369)
+.+...+...+..+.+.+|++++|.|.+.+.+. +.+.|++++ ..+........ ..-..++.+..
T Consensus 2 ~~~~~~v~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~ 81 (126)
T 1eaj_A 2 FARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTS 81 (126)
T ss_dssp CCSSCEESSSEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECC
T ss_pred ccccEEEECCCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEc
Confidence 344445555567788999999999999987665 349999864 22211111100 01112333221
Q ss_pred ---ecceeeEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy12695 206 ---INSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 206 ---~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 246 (369)
......|.|.+++.+|+|.|.|.+.|..|.....+.|.|..
T Consensus 82 ~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 125 (126)
T 1eaj_A 82 NDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 125 (126)
T ss_dssp SCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ccccCCeEEEEECcCChHHCeEEEEEEEcCCccCCcEEEEEEEc
Confidence 12346899999999999999999999999888888888864
No 134
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.10 E-value=1.4e-10 Score=94.08 Aligned_cols=83 Identities=24% Similarity=0.312 Sum_probs=73.9
Q ss_pred CceEEEecCCCCCccCCC-C--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQ-L--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLS 119 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~-~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 119 (369)
..+.++.++|+++.++.. + ...++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++.+|..+++|+.|+|+
T Consensus 31 ~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 110 (170)
T 3g39_A 31 TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLL 110 (170)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeC
Confidence 357899999999988654 3 357999999999955 6789999999999999999999999999999999999999
Q ss_pred ccceecccC
Q psy12695 120 GNPIQKITH 128 (369)
Q Consensus 120 ~N~l~~~~~ 128 (369)
+|++.+.+.
T Consensus 111 ~N~~~c~c~ 119 (170)
T 3g39_A 111 NNPWDCACS 119 (170)
T ss_dssp SSCBCTTBG
T ss_pred CCCCCCCch
Confidence 999998764
No 135
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.10 E-value=4.7e-10 Score=99.47 Aligned_cols=96 Identities=30% Similarity=0.441 Sum_probs=77.2
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEE-eecceeeEEEcccCCCCCE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK-TINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D~G 223 (369)
.|.+...+.++.+.+|+.+.|.|.+.|.|.+.+.|++++..+... ..++... ...+...|.|.+++.+|+|
T Consensus 4 ~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~--------~~~~~~~~~~~~~~~L~i~~v~~~d~G 75 (305)
T 2nzi_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIAD--------GLKYRIQEFKGGYHQLIIASVTDDDAT 75 (305)
T ss_dssp CCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCC--------SSSEEEEEETTTEEEEEESSCCGGGCS
T ss_pred CCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccC--------CCeEEEEECCCCEEEEEEccCChhhCe
Confidence 466666778899999999999999999999999999998776521 1122222 2234468999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecC
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
.|.|.|.|..|.....+.|.|...+
T Consensus 76 ~Y~C~a~n~~g~~~~~~~l~V~~~p 100 (305)
T 2nzi_A 76 VYQVRATNQGGSVSGTASLEVEVPA 100 (305)
T ss_dssp EEEEEEEETTEEEEEEEEEEECEEE
T ss_pred EEEEEEEcCCCCccceEEEEEecCC
Confidence 9999999999998888888887654
No 136
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.09 E-value=1.9e-10 Score=96.43 Aligned_cols=97 Identities=26% Similarity=0.368 Sum_probs=83.8
Q ss_pred ceEEEecCCCCCccCCCC---CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQL---DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG 120 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~---~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 120 (369)
.+.++.++++++.+|... ...++.|+|++|+|. +..|.++++|++|+|++|+|+.+++..|..+++|+.|+|++
T Consensus 30 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 109 (208)
T 2o6s_A 30 TTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNT 109 (208)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCC
Confidence 568999999999888754 357999999999965 56789999999999999999999999999999999999999
Q ss_pred cceecccCCcccccCcCcccccc
Q psy12695 121 NPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 121 N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
|.|+.+++..|..+++|...++.
T Consensus 110 N~l~~~~~~~~~~l~~L~~L~l~ 132 (208)
T 2o6s_A 110 NQLQSLPDGVFDKLTQLKDLRLY 132 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECC
T ss_pred CcCcccCHhHhccCCcCCEEECC
Confidence 99999998888888887665543
No 137
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.09 E-value=4.6e-10 Score=92.14 Aligned_cols=90 Identities=23% Similarity=0.517 Sum_probs=66.2
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+...... ++.. ...+.|.|.+++.+|+|.
T Consensus 96 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~-------~~~~---~~~~~L~i~~v~~~d~G~ 165 (189)
T 2v44_A 96 KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDN-------RFAM---LANNNLQILNINKSDEGI 165 (189)
T ss_dssp CCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCT-------TEEE---CTTSCEEETTCCGGGCEE
T ss_pred CCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCC-------CEEE---ecCCcEEEEEcCcccCeE
Confidence 344555566788999999999999999999999999998776532221 1211 134589999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEE
Q psy12695 225 YTCRAKNGAGEVFTNISLNV 244 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v 244 (369)
|+|.|.|..|.......+.|
T Consensus 166 Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 166 YRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp EEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEEccccCceeeeeEEE
Confidence 99999999876654444443
No 138
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.09 E-value=9.6e-11 Score=112.32 Aligned_cols=82 Identities=27% Similarity=0.336 Sum_probs=76.4
Q ss_pred eEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccccccccccee
Q psy12695 48 ETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQ 124 (369)
Q Consensus 48 ~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~ 124 (369)
+.++|++++|+.||..++..++.|+|++|+|. +.+|.++++|++|+|++|+|+.+++.+|.++++|++|+|++|.|+
T Consensus 3 ~~l~ls~n~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 82 (520)
T 2z7x_B 3 FLVDRSKNGLIHVPKDLSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV 82 (520)
T ss_dssp CEEECTTSCCSSCCCSCCTTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC
T ss_pred ceEecCCCCcccccccccccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee
Confidence 57999999999999999999999999999965 578999999999999999999998889999999999999999999
Q ss_pred cccCC
Q psy12695 125 KITHE 129 (369)
Q Consensus 125 ~~~~~ 129 (369)
.++..
T Consensus 83 ~lp~~ 87 (520)
T 2z7x_B 83 KISCH 87 (520)
T ss_dssp EEECC
T ss_pred ecCcc
Confidence 98876
No 139
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=5.7e-10 Score=82.00 Aligned_cols=81 Identities=20% Similarity=0.382 Sum_probs=61.9
Q ss_pred CCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeC
Q psy12695 153 PDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 232 (369)
.++.+.+|+.++|.|.+. .|.+.+.|++++..+... .++.+........|.|.+++.+|+|.|.|.+.|
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~---------~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~- 87 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSS---------SKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGG- 87 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCC---------SSEEEEEETTEEEEEETTCCTTTCSCEEEEETT-
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCC---------CCEEEEEcCCEEEEEECCCCcccCEEEEEEcCC-
Confidence 456889999999999998 888999999999876421 133333334457899999999999999999853
Q ss_pred CceEEEEEEEEEeec
Q psy12695 233 AGEVFTNISLNVIKV 247 (369)
Q Consensus 233 ~g~~~~~~~l~v~~~ 247 (369)
....+.|.|..+
T Consensus 88 ---~~~~~~l~V~~p 99 (102)
T 2eo1_A 88 ---QQLSFRLQVAGQ 99 (102)
T ss_dssp ---EECCEEEEEESC
T ss_pred ---CcEEEEEEEeCC
Confidence 345577777654
No 140
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.09 E-value=1.8e-10 Score=93.69 Aligned_cols=83 Identities=25% Similarity=0.338 Sum_probs=73.8
Q ss_pred CceEEEecCCCCCccCCC-C--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQ-L--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLS 119 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~-~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 119 (369)
..+.++.++|.++.++.. + ...++.|+|++|+|. +..|.++++|+.|+|++|+|+.+++.+|..+++|+.|+|+
T Consensus 34 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~ 113 (174)
T 2r9u_A 34 DKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLY 113 (174)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECC
T ss_pred CCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeC
Confidence 357899999999988653 3 357999999999965 6679999999999999999999999999999999999999
Q ss_pred ccceecccC
Q psy12695 120 GNPIQKITH 128 (369)
Q Consensus 120 ~N~l~~~~~ 128 (369)
+|++.+.+.
T Consensus 114 ~N~~~c~~~ 122 (174)
T 2r9u_A 114 NNPWDCECR 122 (174)
T ss_dssp SSCBCTTBG
T ss_pred CCCcccccc
Confidence 999998875
No 141
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.08 E-value=7.8e-10 Score=98.47 Aligned_cols=87 Identities=28% Similarity=0.434 Sum_probs=71.1
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEee-cceeeEEEcccCCCCCEEEEEEEE
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTI-NSLSNLTIVAVTMSDSGIYTCRAK 230 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~ 230 (369)
+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++.+... .....|.|.+++.+|+|.|+|.|.
T Consensus 229 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~---------~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 299 (317)
T 2y25_A 229 PDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDD---------HCNLKFEAGRTAYFTINGVSTADSGKYGLVVK 299 (317)
T ss_dssp CSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCS---------SEEECCBTTTEEEEEEBSCCSTTCEEEEEEEE
T ss_pred CccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCC---------cEEEEEcCCCEEEEEECCCCHHHCEEEEEEEE
Confidence 445788999999999999999999999999998775321 2222222 334589999999999999999999
Q ss_pred eCCceEEEEEEEEEeec
Q psy12695 231 NGAGEVFTNISLNVIKV 247 (369)
Q Consensus 231 n~~g~~~~~~~l~v~~~ 247 (369)
|..|..+..+.|.|..+
T Consensus 300 N~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 300 NKYGSETSDFTVSVFIP 316 (317)
T ss_dssp ETTEEEEEEEEEEEECC
T ss_pred eCCCeEEEEEEEEEEcC
Confidence 99999999999988754
No 142
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.08 E-value=6.1e-10 Score=90.81 Aligned_cols=99 Identities=22% Similarity=0.404 Sum_probs=72.9
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEee--cceeeEEEcccCCCCCE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTI--NSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~L~I~~v~~~D~G 223 (369)
|.+...+.++.+.+|+.+.|.|.+.|.|.+.+.|++++..+.... +...... ...+.|.|.+++.+|+|
T Consensus 3 ~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~---------~~~~~~~~~~~~~~L~i~~~~~~d~G 73 (182)
T 1rhf_A 3 LKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLD---------QLYIPVSEQHWIGFLSLKSVERSDAG 73 (182)
T ss_dssp ----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSE---------EEEEEEETTEEEEEEEESSCCGGGCE
T ss_pred CEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCC---------ceEEEecCCCceEEEEEeecCcccCe
Confidence 456667788999999999999999999999999999987664321 1111111 12468999999999999
Q ss_pred EEEEEEEeCCce-EEEEEEEEEeecCCcccC
Q psy12695 224 IYTCRAKNGAGE-VFTNISLNVIKVETAVAQ 253 (369)
Q Consensus 224 ~Y~C~a~n~~g~-~~~~~~l~v~~~~~~~~~ 253 (369)
.|.|.+.|..|. .+..+.|.|..++.....
T Consensus 74 ~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~ 104 (182)
T 1rhf_A 74 RYWCQVEDGGETEISQPVWLTVEGVPFFTVE 104 (182)
T ss_dssp EEEEEESSCTTCEECCCEEEEEECSCEEEEC
T ss_pred EEEEEEEcCCCcEEEEEEEEEEecCCeEEec
Confidence 999999998775 456788888876644333
No 143
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.08 E-value=1.4e-09 Score=89.27 Aligned_cols=97 Identities=14% Similarity=0.280 Sum_probs=73.4
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCC-CCeEEEEe-CCeEeeecccccccCCcceEEE-EeecceeeEEEcccCCCCCE
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSP-VPKIKWIF-KEKIIANISSGLANMNKRQYII-KTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p-~p~i~W~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~I~~v~~~D~G 223 (369)
.+...+.+..+.+|+.+.|.|.+.+.| .+.+.|++ ++..+... ..++.. ......+.|.|.+++.+|+|
T Consensus 4 ~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~--------~~~~~~~~~~~~~~~L~i~~~~~~d~G 75 (191)
T 1epf_A 4 QVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPN--------QQRISVVWNDDDSSTLTIYNANIDDAG 75 (191)
T ss_dssp CEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCB--------SSSEEEEEEETTEEEEEECSCCGGGCE
T ss_pred EEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCC--------CCeEEEEECCCCceEEEEccCCcccCE
Confidence 344567788999999999999999977 78999999 66655421 112222 22345678999999999999
Q ss_pred EEEEEEEeCC-ceEEEEEEEEEeecCCcc
Q psy12695 224 IYTCRAKNGA-GEVFTNISLNVIKVETAV 251 (369)
Q Consensus 224 ~Y~C~a~n~~-g~~~~~~~l~v~~~~~~~ 251 (369)
.|.|.+.|.. +.....+.|.|..++...
T Consensus 76 ~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~ 104 (191)
T 1epf_A 76 IYKCVVTAEDGTQSEATVNVKIFQKLMFK 104 (191)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEECCSEEE
T ss_pred EEEEEEEcCCCcceEEEEEEEeecCceEe
Confidence 9999999998 567777888887665443
No 144
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.07 E-value=3.5e-10 Score=100.91 Aligned_cols=83 Identities=17% Similarity=0.253 Sum_probs=67.4
Q ss_pred CCeeeccCCeEEEEEEeeCCCCC-eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 153 PDVTAEENENVTLSCRATGSPVP-KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
....+.+|+.++|.|.+.|.|.| .|.|+++++.+.... ....+.|.|.+++.+|+|.|+|.|.|
T Consensus 225 ~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~---------------~~~~~~L~i~~v~~~d~G~Y~C~a~N 289 (313)
T 4fqp_A 225 DNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA---------------VAQGAQLLIRPVDKPINTTLICNVTN 289 (313)
T ss_dssp CSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE---------------EEETTEEEECCCSSCCEEEEEEEEEC
T ss_pred cceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce---------------EEeCCEEEECcCChhhCEEEEEEEEe
Confidence 44556778999999999999999 599999987654210 01245799999999999999999999
Q ss_pred CCceEEEEEEEEEeecCCc
Q psy12695 232 GAGEVFTNISLNVIKVETA 250 (369)
Q Consensus 232 ~~g~~~~~~~l~v~~~~~~ 250 (369)
..|..+..+.|.|...|+.
T Consensus 290 ~~G~~~~~~~l~V~~~PP~ 308 (313)
T 4fqp_A 290 ALGARQAELTVQVKEGPPH 308 (313)
T ss_dssp SSCEEEEEEEEEEECCC--
T ss_pred CCCcEEEEEEEEEEeCCCC
Confidence 9999999999999887753
No 145
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.06 E-value=4.5e-10 Score=92.95 Aligned_cols=86 Identities=33% Similarity=0.455 Sum_probs=69.4
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEE
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYT 226 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 226 (369)
.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .. .....+.|.|.++..+|+|.|+
T Consensus 115 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~---------~~----~~~~~~~L~i~~v~~~d~G~Y~ 181 (201)
T 3s97_C 115 DIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPST---------AE----ISTSGAVLKIFNIQLEDEGIYE 181 (201)
T ss_dssp EEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTT---------CE----EETTTTEEEECSCCGGGCEEEE
T ss_pred ceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCc---------ee----ecCCCCEEEEccCChhhCEEEE
Confidence 3443445778899999999999999999999999998754321 01 1223568999999999999999
Q ss_pred EEEEeCCceEEEEEEEEEe
Q psy12695 227 CRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 227 C~a~n~~g~~~~~~~l~v~ 245 (369)
|.|.|..|.....+.|.|.
T Consensus 182 C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 182 CEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp EEEEETTEEEEEEEEEEEE
T ss_pred EEEEecCCceeeeEEEEEe
Confidence 9999999999999888875
No 146
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.06 E-value=3.6e-10 Score=96.29 Aligned_cols=95 Identities=22% Similarity=0.342 Sum_probs=77.7
Q ss_pred ceEEEecCCCCCccCCC-C--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQ-L--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG 120 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~-~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 120 (369)
.+.++.+++.++.++.. + ...++.|+|++|+|. +..|.++++|+.|+|++|+|+.+++..|..+++|+.|+|++
T Consensus 42 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~ 121 (229)
T 3e6j_A 42 AQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCC 121 (229)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccC
Confidence 56899999999987543 3 357999999999965 56789999999999999999999999999999999999999
Q ss_pred cceecccCCcccccCcCccccc
Q psy12695 121 NPIQKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 121 N~l~~~~~~~f~~l~~l~~~~~ 142 (369)
|.|+.++. .|..+++|...++
T Consensus 122 N~l~~lp~-~~~~l~~L~~L~L 142 (229)
T 3e6j_A 122 NKLTELPR-GIERLTHLTHLAL 142 (229)
T ss_dssp SCCCSCCT-TGGGCTTCSEEEC
T ss_pred CcccccCc-ccccCCCCCEEEC
Confidence 99998864 4566666655443
No 147
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.05 E-value=1.4e-09 Score=89.22 Aligned_cols=96 Identities=23% Similarity=0.391 Sum_probs=72.9
Q ss_pred cCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEe-CCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEE
Q psy12695 149 RPITPDVTAEENENVTLSCRATGSPVPKIKWIF-KEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTC 227 (369)
Q Consensus 149 ~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 227 (369)
...+..+.+.+|+.+.|.|.+.|.|. .+.|++ ++..+.. ..++..........|.|.+++.+|+|.|.|
T Consensus 6 ~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~---------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 75 (189)
T 2v44_A 6 TISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIS---------TQRVVVQKEGVRSRLTIYNANIEDAGIYRC 75 (189)
T ss_dssp EESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCC---------CSSEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred EecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCC---------CceEEEECCCCeEEEEEccCCcccCeEEEE
Confidence 34567788999999999999999887 899999 5544321 123333344455689999999999999999
Q ss_pred EEEeCCceE-EEEEEEEEeecCCcccCC
Q psy12695 228 RAKNGAGEV-FTNISLNVIKVETAVAQP 254 (369)
Q Consensus 228 ~a~n~~g~~-~~~~~l~v~~~~~~~~~~ 254 (369)
.+.|..|.. ...+.|.|...+.....+
T Consensus 76 ~~~~~~g~~~~~~~~l~v~~~p~~~~~~ 103 (189)
T 2v44_A 76 QATDAKGQTQEATVVLEIYQKLTFREVV 103 (189)
T ss_dssp EEECTTSCEEEEEEEEEEECCCEEESCC
T ss_pred EEEeCCCCcEEEEEEEEEecCCceeecC
Confidence 999998875 677888887766544333
No 148
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.05 E-value=9.8e-10 Score=83.30 Aligned_cols=85 Identities=18% Similarity=0.285 Sum_probs=60.6
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEEcccCCCCC
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 222 (369)
+...|..+.+.+|++++|.|.+.+.+.+.+.|+++. . .+.............++.+........|.|.+++.+|+
T Consensus 6 v~q~p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds 85 (119)
T 2e27_L 6 MTQSPSSLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPEDA 85 (119)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred eEecCCeEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChHHC
Confidence 334567788999999999999999888899999853 1 12211111111113456555455667899999999999
Q ss_pred EEEEEEEEeC
Q psy12695 223 GIYTCRAKNG 232 (369)
Q Consensus 223 G~Y~C~a~n~ 232 (369)
|.|.|.+.|.
T Consensus 86 G~Y~C~~~~~ 95 (119)
T 2e27_L 86 ATYYCLQYDN 95 (119)
T ss_dssp EEEEEEECGG
T ss_pred EEEEEEEccC
Confidence 9999999875
No 149
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.05 E-value=5.8e-10 Score=91.65 Aligned_cols=96 Identities=32% Similarity=0.442 Sum_probs=73.6
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+..+.+.+|+.+.|.|.+.|.|.+.+.|++++..+... ..++.+ ......|.|.+++.+|+|.
T Consensus 7 ~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~--------~~~~~~--~~~~~~L~i~~~~~~d~G~ 76 (192)
T 2iep_A 7 APVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLF--------DTRYSI--RENGQLLTILSVEDSDDGI 76 (192)
T ss_dssp EEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTT--------CTTEEE--EGGGTEEEESSCCGGGCEE
T ss_pred CceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEcccc--------CccEEE--cCCccEEEEcCCCcccCeE
Confidence 355666677788999999999999999999999999998766421 112222 2234579999999999999
Q ss_pred EEEEEEeCCce-EEEEEEEEEeecCCc
Q psy12695 225 YTCRAKNGAGE-VFTNISLNVIKVETA 250 (369)
Q Consensus 225 Y~C~a~n~~g~-~~~~~~l~v~~~~~~ 250 (369)
|.|.+.|..|. ....+.+.|...+..
T Consensus 77 Y~C~~~~~~~~~~~~~~~l~v~~~p~~ 103 (192)
T 2iep_A 77 YCCTANNGVGGAVESCGALQVKMKPKI 103 (192)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEEEEE
T ss_pred EEEEEEcCCCceeEeEEEEEEEeCCcc
Confidence 99999998887 556677777765543
No 150
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.05 E-value=7.4e-10 Score=82.57 Aligned_cols=85 Identities=16% Similarity=0.291 Sum_probs=60.6
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEEcccCCCCC
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 222 (369)
+...|..+.+.+|++++|.|.+.+.+.+.+.|+++. . .+.............++.+........|.|.+++.+|+
T Consensus 6 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds 85 (109)
T 2q20_A 6 MTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDI 85 (109)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeeCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChhhC
Confidence 444567789999999999999998888899999864 1 12211111111113455555445567899999999999
Q ss_pred EEEEEEEEeC
Q psy12695 223 GIYTCRAKNG 232 (369)
Q Consensus 223 G~Y~C~a~n~ 232 (369)
|.|.|.+.+.
T Consensus 86 G~Y~C~~~~~ 95 (109)
T 2q20_A 86 ATYYCQQYDN 95 (109)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEEeeC
Confidence 9999999874
No 151
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.05 E-value=8.9e-10 Score=90.14 Aligned_cols=78 Identities=17% Similarity=0.272 Sum_probs=67.2
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
+....+.+|+.++|.|.+.+.|.|.+.|++++..+. ...+.|.|.+++.+|+|.|+|.|.|
T Consensus 104 ~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~-------------------~~~~~L~i~~v~~~d~G~Y~C~a~n 164 (184)
T 2ny1_B 104 NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI-------------------QGGKTLSVSQLELQDSGTWTCTVLQ 164 (184)
T ss_dssp SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEE-------------------EESSEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCccc-------------------cCceEEEEecCCcCCCeEEEEEEEE
Confidence 345578999999999999999999999999875432 1256899999999999999999999
Q ss_pred CCceEEEEEEEEEeecC
Q psy12695 232 GAGEVFTNISLNVIKVE 248 (369)
Q Consensus 232 ~~g~~~~~~~l~v~~~~ 248 (369)
..+.....+.|.|...+
T Consensus 165 ~~~~~~~~~~l~V~~~p 181 (184)
T 2ny1_B 165 NQKKVEFKIDIVVLAFQ 181 (184)
T ss_dssp TTEEEEEEEEEEEECCC
T ss_pred CCceEEEEEEEEEEecC
Confidence 99999999999998765
No 152
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.05 E-value=6.2e-10 Score=107.95 Aligned_cols=93 Identities=23% Similarity=0.345 Sum_probs=74.6
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
+|.+...+.+..+.+|+.+.|.|.+.|.|.|.+.|+++++.+...+ .++.+......+.|.|.+++.+|+|.
T Consensus 477 ~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~--------~~~~~~~~~~~~~L~i~~~~~~d~G~ 548 (570)
T 3b43_A 477 PPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRES--------DNIWISYSENIATLQFSRAEPANAGK 548 (570)
T ss_dssp CCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCT--------TTEEECCCSSEEEEEESSCCTTCCEE
T ss_pred CCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCC--------CeEEEEECCCEEEEEECcCCHHHCEE
Confidence 3556666678889999999999999999999999999986554221 12222223346789999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEe
Q psy12695 225 YTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
|+|.|.|..|.....+.|.|.
T Consensus 549 Y~C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 549 YTCQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp EEEEEECSSCEEEEEEEECCB
T ss_pred EEEEEEECCcEEEEEEEEEEe
Confidence 999999999999999998775
No 153
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.04 E-value=4.1e-10 Score=94.44 Aligned_cols=92 Identities=26% Similarity=0.411 Sum_probs=71.5
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ..++.. ..+.|.|.+++.+|+|.|
T Consensus 111 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~--------~~~~~~----~~~~L~i~~v~~~d~G~Y 178 (212)
T 2yd1_A 111 PVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMS--------NPRYSL----KDGFLQIENSREEDQGKY 178 (212)
T ss_dssp CEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTT--------STTEEE----ETTEEEECSCCGGGCEEE
T ss_pred CeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccC--------CCeEEc----cCCeEEEccCChhhCEEE
Confidence 44555566788899999999999999999999999998776431 112221 235899999999999999
Q ss_pred EEEEEeCCceEEEE-EEEEEeecCC
Q psy12695 226 TCRAKNGAGEVFTN-ISLNVIKVET 249 (369)
Q Consensus 226 ~C~a~n~~g~~~~~-~~l~v~~~~~ 249 (369)
+|.|.|..|..... +.|.|.....
T Consensus 179 ~C~a~N~~G~~~s~~~~l~V~~~~~ 203 (212)
T 2yd1_A 179 ECVAENSMGTEHSKATNLYVKVRRV 203 (212)
T ss_dssp EEEEEETTEEEECCCEEEEEEC---
T ss_pred EEEeecCCCceeEEEEEEEEEeccc
Confidence 99999999998765 7888876543
No 154
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.04 E-value=9e-10 Score=81.96 Aligned_cols=84 Identities=19% Similarity=0.220 Sum_probs=58.6
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCe-----EeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKEK-----IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
..|..+.+.+|++++|.|.+.+.+.+.+.|+++.. .+.............++.+........|.|.+++.+|+|.
T Consensus 6 q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 85 (108)
T 1qfw_M 6 QSPKSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAEDFAD 85 (108)
T ss_dssp EECSCEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTCCSE
T ss_pred EeCCeEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhhCEE
Confidence 34677899999999999999988888899998541 1221111110011234544333445689999999999999
Q ss_pred EEEEEEeCC
Q psy12695 225 YTCRAKNGA 233 (369)
Q Consensus 225 Y~C~a~n~~ 233 (369)
|.|.+.+..
T Consensus 86 Y~C~~~~~~ 94 (108)
T 1qfw_M 86 YHCGQTYNH 94 (108)
T ss_dssp EEEEECSSS
T ss_pred EEEEEccCC
Confidence 999998753
No 155
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.04 E-value=1.4e-09 Score=89.59 Aligned_cols=86 Identities=19% Similarity=0.353 Sum_probs=69.5
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCC-CCCEEEEEEEE
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTM-SDSGIYTCRAK 230 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~ 230 (369)
+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++........+.|.|.++.. +|+|.|+|.|.
T Consensus 110 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~---------~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 180 (197)
T 3lcy_A 110 KEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNS---------ENITIENTEHYTHLVMKNVQRKTHAGKYKVQLS 180 (197)
T ss_dssp CSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC---------SSEEEEECSSEEEEEESSCCHHHHCEEEEEEEE
T ss_pred CcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCC---------CceEEEEcCCEEEEEEccccchhhCceEEEEEE
Confidence 34567889999999999999999999999998776432 123333333447899999985 89999999999
Q ss_pred eCCceEEEEEEEEEee
Q psy12695 231 NGAGEVFTNISLNVIK 246 (369)
Q Consensus 231 n~~g~~~~~~~l~v~~ 246 (369)
|..|.....+.|.|..
T Consensus 181 n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 181 NVFGTVDAILDVEIQD 196 (197)
T ss_dssp CSSCEEEEEEEEEEEC
T ss_pred cCcCceEEEEEEEEec
Confidence 9999999999988864
No 156
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.04 E-value=1.2e-09 Score=89.60 Aligned_cols=86 Identities=41% Similarity=0.602 Sum_probs=70.3
Q ss_pred CCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeC
Q psy12695 153 PDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 232 (369)
.++.+.+|+.+.|.|.+.|.|.+.+.|++++..+... .++. .......|.|.+++.+|+|.|.|.+.|.
T Consensus 12 ~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~---------~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 80 (192)
T 2va4_A 12 FNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN---------EKYI--LKGSNTELTVRNIINSDGGPYVCRATNK 80 (192)
T ss_dssp EEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCS---------SSEE--EETTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred cEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCC---------ccEE--EeCCeeEEEEecCChhcCcEEEEEEEcc
Confidence 3578899999999999999999999999999776532 1222 2234567999999999999999999999
Q ss_pred CceEEEEEEEEEeecCC
Q psy12695 233 AGEVFTNISLNVIKVET 249 (369)
Q Consensus 233 ~g~~~~~~~l~v~~~~~ 249 (369)
.|.....+.|.|...+.
T Consensus 81 ~~~~~~~~~l~V~~~p~ 97 (192)
T 2va4_A 81 AGEDEKQAFLQVFVQPH 97 (192)
T ss_dssp TEEEEEEEEEEEEEEEE
T ss_pred ccccceEEEEEEEccCc
Confidence 99988888888876654
No 157
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.04 E-value=4.7e-09 Score=81.78 Aligned_cols=98 Identities=18% Similarity=0.184 Sum_probs=67.1
Q ss_pred CCCCeeeccCCeEEEEEEeeCCCC---CeEEEEeCCeE--eeeccccc------ccCCcceEEEEe---ecceeeEEEcc
Q psy12695 151 ITPDVTAEENENVTLSCRATGSPV---PKIKWIFKEKI--IANISSGL------ANMNKRQYIIKT---INSLSNLTIVA 216 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p~---p~i~W~~~~~~--~~~~~~~~------~~~~~~~~~~~~---~~~~~~L~I~~ 216 (369)
.+..+.+.+|++++|.|.+.+.+. +.+.|++++.. +....... ...-..++.+.. ..+...|.|.+
T Consensus 12 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~ 91 (139)
T 1pko_A 12 PGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQN 91 (139)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEcc
Confidence 445788999999999999986543 68999997641 11110000 000112333322 22356899999
Q ss_pred cCCCCCEEEEEEEEeCCceEEEEEEEEEeecC
Q psy12695 217 VTMSDSGIYTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 217 v~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
++.+|+|.|+|.+.+..|.....+.|.|..+.
T Consensus 92 v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~P~ 123 (139)
T 1pko_A 92 VRFSDEGGYTCFFRDHSYQEEAAVELKVEDPF 123 (139)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEECTT
T ss_pred CCHHHCEEEEEEEEcCCCceEEEEEEEEecCc
Confidence 99999999999999999988888999998543
No 158
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.04 E-value=3.3e-10 Score=94.72 Aligned_cols=83 Identities=19% Similarity=0.293 Sum_probs=63.7
Q ss_pred CCeeeccCCeEEEEEEe-eCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 153 PDVTAEENENVTLSCRA-TGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
....+.+|+.+.|.|.+ .|.|.|.+.|++++.......... .....+.|.|.+++.+|+|.|+|.|.|
T Consensus 129 ~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~-----------~~~~~~~L~i~~~~~~d~G~Y~C~a~N 197 (214)
T 3jz7_A 129 VDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWL-----------AEMTSPVISVKNASSEYSGTYSCTVQN 197 (214)
T ss_dssp EESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGG-----------GGTTSSEEEECSCCGGGCEEEEEEEEC
T ss_pred eecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCccce-----------eccCCCEEEEecCCHHHCEEEEEEEEc
Confidence 34457889999999999 899999999999543221111000 011245899999999999999999999
Q ss_pred CCceEEEEEEEEEee
Q psy12695 232 GAGEVFTNISLNVIK 246 (369)
Q Consensus 232 ~~g~~~~~~~l~v~~ 246 (369)
..|.....+.|.|..
T Consensus 198 ~~g~~~~~~~l~V~~ 212 (214)
T 3jz7_A 198 RVGSDQCMLRLDVVP 212 (214)
T ss_dssp SSCEEEEEEEECCBC
T ss_pred CCCcEEEEEEEEEeC
Confidence 999999998888874
No 159
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.03 E-value=1.1e-09 Score=96.23 Aligned_cols=85 Identities=41% Similarity=0.626 Sum_probs=66.9
Q ss_pred CeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCC
Q psy12695 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGA 233 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 233 (369)
...+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++. .....+.|.|.++..+|+|.|+|.|.|..
T Consensus 203 ~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~---------~~~--~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~ 271 (291)
T 2wim_A 203 NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE---------KYI--LKGSNTELTVRNIINSDGGPYVCRATNKA 271 (291)
T ss_dssp ECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTT---------TEE--ECSTTCEEEEESCCSTTCEEEEEEEEETT
T ss_pred cceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCc---------cEE--EcCCccEEEEeeCCcccCEEEEEEEEECC
Confidence 4567889999999999999999999999998765321 111 12235689999999999999999999999
Q ss_pred ceEEEEEEEEEeecCC
Q psy12695 234 GEVFTNISLNVIKVET 249 (369)
Q Consensus 234 g~~~~~~~l~v~~~~~ 249 (369)
|.....+.|.|...+.
T Consensus 272 G~~~~~~~l~v~~~~~ 287 (291)
T 2wim_A 272 GEDEKQAFLQVFVQHH 287 (291)
T ss_dssp EEEEEEEEEEC-----
T ss_pred CceeeeEEEEEEEecc
Confidence 9999999999987654
No 160
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.03 E-value=1.4e-09 Score=105.07 Aligned_cols=92 Identities=26% Similarity=0.355 Sum_probs=78.9
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+.+..+.+|+++.+.|.+.|.|.|.++|++++..+.. ..++.+........|.|.++..+|+|.
T Consensus 482 ~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~---------s~~~~i~~~~~~~~L~I~~~~~~D~G~ 552 (573)
T 3uto_A 482 QPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQ---------SVKYMKRYNGNDYGLTINRVKGDDKGE 552 (573)
T ss_dssp SCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCS---------SSSEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEccc---------CCcEEEEEcCCEEEEEEcCCCcccCcE
Confidence 45566667888999999999999999999999999999987753 234555556677889999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEe
Q psy12695 225 YTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
|+|.|.|..|..++.+.|+|.
T Consensus 553 Yt~~A~N~~G~~~~~v~l~Vt 573 (573)
T 3uto_A 553 YTVRAKNSYGTKEEIVFLNVT 573 (573)
T ss_dssp EEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEeCCCcEEEEEEEEEC
Confidence 999999999999999999874
No 161
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.03 E-value=2.5e-09 Score=89.52 Aligned_cols=99 Identities=12% Similarity=0.204 Sum_probs=70.5
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeC--CeE---eeecccccccCCcceEEEEeecceeeEEEcccCCCC
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFK--EKI---IANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 221 (369)
.+...+ .+.+.+|+.++|.|.+.+.|.+.+.|++. +.. +.............++..........|.|.+++.+|
T Consensus 3 ~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 81 (213)
T 3mj8_L 3 TLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGD 81 (213)
T ss_dssp CBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhh
Confidence 344555 88899999999999999999999999983 211 111111111112234554445667889999999999
Q ss_pred CEEEEEEEEeCCc---eEEEEEEEEEee
Q psy12695 222 SGIYTCRAKNGAG---EVFTNISLNVIK 246 (369)
Q Consensus 222 ~G~Y~C~a~n~~g---~~~~~~~l~v~~ 246 (369)
+|.|.|.+.|..| .....+.|.|..
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 109 (213)
T 3mj8_L 82 EADYYCQSWDGTNSAWVFGSGTKVTVLG 109 (213)
T ss_dssp CEEEEEEEEETTTTEEEEBCCEEEEEEC
T ss_pred CEEEEEEeccCCcceeEEcCceEEEEeC
Confidence 9999999999988 445567777773
No 162
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.03 E-value=9.2e-10 Score=97.66 Aligned_cols=93 Identities=24% Similarity=0.437 Sum_probs=69.9
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEe--ecceeeEEEcccCC-CC
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT--INSLSNLTIVAVTM-SD 221 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~-~D 221 (369)
+|.+...+.++.+.+|+.+.|.|.+.|.|.|.+.|++++..+... ++.... ......|.|.+++. +|
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~----------~~~~~~~~~~~~~~L~i~~~~~~~D 75 (304)
T 2yd9_A 6 PPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ----------RFETIEFDESAGAVLRIQPLRTPRD 75 (304)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CT----------TEEEEEETTTTEEEEEECSCCTTTT
T ss_pred CCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC----------ceEEEEecCCCceEEEEecccccCC
Confidence 466677788899999999999999999999999999998765321 111111 12236899999998 99
Q ss_pred CEEEEEEEEeCCceEEEEEEEEEeec
Q psy12695 222 SGIYTCRAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 222 ~G~Y~C~a~n~~g~~~~~~~l~v~~~ 247 (369)
+|.|+|.|.|..|.....+.|.|...
T Consensus 76 ~G~Y~C~a~n~~g~~~~~~~l~V~~~ 101 (304)
T 2yd9_A 76 ENVYECVAQNSVGEITVHAKLTVLRE 101 (304)
T ss_dssp CSEEEEEEECSSCEECCEEEEEEECG
T ss_pred CeEEEEEEECCCCeEEEEEEEEEecc
Confidence 99999999999999888889988765
No 163
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.03 E-value=9.1e-10 Score=83.63 Aligned_cols=97 Identities=19% Similarity=0.275 Sum_probs=64.8
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
..|..+.+.+|++++|.|.+.+.+.+.+.|+++. . .+.............++.+........|.|.+++.+|+|.
T Consensus 6 q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~ 85 (120)
T 1mqk_L 6 QTPVSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDFGS 85 (120)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred ecCCeEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHHCEE
Confidence 3467788999999999999998888899999853 2 1221111111111345655545566789999999999999
Q ss_pred EEEEEEeCC-ce-EEEEEEEEEee
Q psy12695 225 YTCRAKNGA-GE-VFTNISLNVIK 246 (369)
Q Consensus 225 Y~C~a~n~~-g~-~~~~~~l~v~~ 246 (369)
|.|.+.|.. .. ......|.|..
T Consensus 86 Y~C~~~~~~~~~~fg~gt~L~V~~ 109 (120)
T 1mqk_L 86 YYCQHHYGTPPLTFGGGTKLEIKR 109 (120)
T ss_dssp EEEEECSSSSSCCBCCCEEEEEC-
T ss_pred EEEEEEeCCCceEECCCeEEEEec
Confidence 999998753 21 22234555543
No 164
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.03 E-value=6.6e-10 Score=92.80 Aligned_cols=93 Identities=26% Similarity=0.421 Sum_probs=70.5
Q ss_pred CccCCCCCeeeccCCeEEEEEEe-eCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 147 NIRPITPDVTAEENENVTLSCRA-TGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
.+...+....+.+|+.+.|.|.+ .|.|.|.+.|++++..+.... .++.. ..+.|.|.+++.+|+|.|
T Consensus 113 ~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~--------~~~~~----~~~~L~i~~~~~~d~G~Y 180 (212)
T 2v9r_A 113 DFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKD--------ERITI----RGGKLMITYTRKSDAGKY 180 (212)
T ss_dssp SCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTS--------TTEEE----ETTEEEESSCCGGGCEEE
T ss_pred cceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCc--------ceEEc----cCCeEEEeeCCHhhCeeE
Confidence 34445677889999999999999 899999999999998765321 12211 245899999999999999
Q ss_pred EEEEEeCCceEEEE-EEEEEeecCCcc
Q psy12695 226 TCRAKNGAGEVFTN-ISLNVIKVETAV 251 (369)
Q Consensus 226 ~C~a~n~~g~~~~~-~~l~v~~~~~~~ 251 (369)
.|.|.|..|..... +.|.|...|...
T Consensus 181 ~C~a~N~~g~~~s~~~~l~V~~~P~~~ 207 (212)
T 2v9r_A 181 VCVGTNMVGERESEVAELTVLERPSFV 207 (212)
T ss_dssp EEEEEETTEEEECCCEEEEEEC-----
T ss_pred EEEEecccCceecceEEEEEEeCchHh
Confidence 99999999986654 889888776543
No 165
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.03 E-value=1.1e-09 Score=89.92 Aligned_cols=90 Identities=21% Similarity=0.202 Sum_probs=70.5
Q ss_pred CCccCCCCCeeecc-CCeEEEEEEeeCCCC--CeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCC
Q psy12695 146 PNIRPITPDVTAEE-NENVTLSCRATGSPV--PKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 146 p~i~~~~~~~~~~~-G~~~~l~C~~~g~p~--p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 222 (369)
|.+.. +....+.+ |+.+.|.|.+.+.|. +.+.|++++..+..... ....+.|.|.+++.+|+
T Consensus 4 P~i~~-~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~--------------~~~~~~L~i~~~~~~d~ 68 (190)
T 2wv3_A 4 PRIVT-SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRK--------------NASNMEYRINKPRAEDS 68 (190)
T ss_dssp CEEEE-CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCB--------------CCSEEEEEESSCCGGGC
T ss_pred Ccccc-cceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccce--------------EeccEEEEEecCCcccC
Confidence 44443 45566666 999999999999887 78999999876642110 01357899999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEEeecCCcc
Q psy12695 223 GIYTCRAKNGAGEVFTNISLNVIKVETAV 251 (369)
Q Consensus 223 G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~ 251 (369)
|.|.|.+.|. |.....+.|.|...+...
T Consensus 69 G~Y~C~~~n~-~~~~~~~~l~V~~~p~~~ 96 (190)
T 2wv3_A 69 GEYHCVYHFV-SAPKANATIEVKAAPDIT 96 (190)
T ss_dssp EEEEEEEEET-TEEEEEEEEEEECCCEEE
T ss_pred EEEEEEEEeC-CcccccEEEEEecCCccc
Confidence 9999999999 888899999998776443
No 166
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.03 E-value=6.4e-10 Score=97.93 Aligned_cols=100 Identities=17% Similarity=0.255 Sum_probs=70.2
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCe-EEEEeCCeEeeecccccccCCcceEEEE-eecceeeEEEcccCCCCC
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPK-IKWIFKEKIIANISSGLANMNKRQYIIK-TINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D~ 222 (369)
.|.+...+....+.+|+.+.|.|.+.|.|.|. +.|++++..+...... .....+... .....+.|.|.+++.+|+
T Consensus 188 ~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~L~I~~v~~~d~ 264 (290)
T 2o26_X 188 IPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQV---KHNSWHRGDFNYERQETLTISSARVDDS 264 (290)
T ss_dssp CCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCE---ECCEEEEETTEEEEEEEEEESSCCSSSC
T ss_pred CCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceee---cccccccCceeeEEEEEEEEcCCCcccC
Confidence 34454555667889999999999999999997 9999988763100000 000001000 112356899999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEEeec
Q psy12695 223 GIYTCRAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 223 G~Y~C~a~n~~g~~~~~~~l~v~~~ 247 (369)
|.|.|.|.|..|.....+.|.|...
T Consensus 265 G~Y~C~a~N~~g~~~~~~~l~V~~~ 289 (290)
T 2o26_X 265 GVFMCYANNTFGSANVTTTLKVVEK 289 (290)
T ss_dssp EEEEEEEECSSCEEEEEEEECC---
T ss_pred eEEEEEEeCCCCcEEEEEEEEEEeC
Confidence 9999999999999998888888654
No 167
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.03 E-value=2.6e-10 Score=92.95 Aligned_cols=97 Identities=18% Similarity=0.195 Sum_probs=81.2
Q ss_pred ceEEEecCCCCCccCCC--CCCCccEEEeecceeCh-hhccCCcccCeeeccCCcccccCCcccccccccccccccccce
Q psy12695 47 KETVLCKAKNFTTIPEQ--LDVGTQVLDLSDNFLDR-YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPI 123 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~--~~~~~~~L~l~~n~i~~-~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l 123 (369)
.+.+++++++++.+|.. +.+.++.|+|++|+|.. ..|.++++|+.|+|++|+|+.+++..|..+++|+.|+|++|.|
T Consensus 21 L~~L~l~~n~l~~i~~~~~~~~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i 100 (176)
T 1a9n_A 21 DRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSL 100 (176)
T ss_dssp CEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCC
T ss_pred ceEEEeeCCCCchhHHhhhcCCCCCEEECCCCCCCcccccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcC
Confidence 57899999999988752 23489999999999764 5788999999999999999999988889999999999999999
Q ss_pred ecccC-CcccccCcCcccccc
Q psy12695 124 QKITH-EAFINVPKLNLEDFA 143 (369)
Q Consensus 124 ~~~~~-~~f~~l~~l~~~~~~ 143 (369)
+.++. ..|..+++|...++.
T Consensus 101 ~~~~~~~~l~~l~~L~~L~l~ 121 (176)
T 1a9n_A 101 VELGDLDPLASLKSLTYLCIL 121 (176)
T ss_dssp CCGGGGGGGGGCTTCCEEECC
T ss_pred CcchhhHhhhcCCCCCEEEec
Confidence 98875 467777776554443
No 168
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.03 E-value=1.3e-09 Score=89.86 Aligned_cols=84 Identities=23% Similarity=0.437 Sum_probs=68.3
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCC-eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVP-KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
.|.+...+....+.+|+.+.|.|.+.|.|.| .+.|++++..+...... ...+.|.|.+++ |+|
T Consensus 106 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~--------------~~~~~L~i~~~~--d~G 169 (195)
T 2c5d_C 106 LPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH--------------GPQRSLHVPGLN--KTS 169 (195)
T ss_dssp SCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS--------------SCCEEEEECCCS--SCE
T ss_pred CCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc--------------CCCCeEEEcccc--cCc
Confidence 4556666677889999999999999999999 99999998766432110 235689999887 899
Q ss_pred EEEEEEEeCCceEE-EEEEEEE
Q psy12695 224 IYTCRAKNGAGEVF-TNISLNV 244 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~-~~~~l~v 244 (369)
.|.|.|.|..|... ..+.|.|
T Consensus 170 ~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 170 SFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEE
T ss_pred eEEEEEEcCCCceEEEEEEEEE
Confidence 99999999999986 7888888
No 169
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.03 E-value=1.3e-09 Score=95.73 Aligned_cols=98 Identities=22% Similarity=0.443 Sum_probs=70.8
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEE-eecceeeEEEcccCCCCCEEE
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK-TINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y 225 (369)
.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++........... ..... .....+.|.|.+++.+|+|.|
T Consensus 183 ~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~L~I~~v~~~D~G~Y 257 (289)
T 3mjg_X 183 NVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVT-----DFLLDMPYHIRSILHIPSAELEDSGTY 257 (289)
T ss_dssp CCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEE-----EESCTTTTEEEEEEEESSCCSSCCEEE
T ss_pred CcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccc-----cccCCcceEEEEEEEEcccChhhCcEE
Confidence 333334557789999999999999999999999987643211000000 00000 011356899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEeecCC
Q psy12695 226 TCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|.|.|..|.....+.|.|...+.
T Consensus 258 ~C~a~N~~G~~~~~~~l~v~~~~~ 281 (289)
T 3mjg_X 258 TCNVTESVNDHQDEKAINITVVES 281 (289)
T ss_dssp EEEEEETTTTEEEEEEEEEEEEC-
T ss_pred EEEeecCCCCceeEEEEEEEEEec
Confidence 999999999999999999987664
No 170
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.03 E-value=5.6e-10 Score=102.98 Aligned_cols=90 Identities=30% Similarity=0.517 Sum_probs=73.5
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++.. ...+.|.|.++..+|+|.|
T Consensus 313 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~---------~~~~---~~~~~L~i~~v~~~d~G~Y 380 (403)
T 3laf_A 313 PWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSD---------YFQI---VGGSNLRILGVVKSDEGFY 380 (403)
T ss_dssp EEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSS---------SEEE---ETTTEEEESSCCGGGCEEE
T ss_pred CcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCC---------cEEE---ecCccEEEeccccccCEEE
Confidence 445556677888999999999999999999999999998764321 1111 1346799999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEeec
Q psy12695 226 TCRAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~~ 247 (369)
.|.|.|..|.....+.|.|..+
T Consensus 381 ~C~a~N~~G~~~~~~~l~V~~P 402 (403)
T 3laf_A 381 QCVAENEAGNAQSSAQLIVPKP 402 (403)
T ss_dssp EEEEEETTEEEEEEEEEECCCC
T ss_pred EEEEEcCCceEEEEEEEEEeCC
Confidence 9999999999999999988764
No 171
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.03 E-value=1.3e-09 Score=80.98 Aligned_cols=84 Identities=14% Similarity=0.215 Sum_probs=59.7
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
..|..+.+.+|++++|.|.+.+.+.+.+.|+++. . .+.............++.+........|.|.+++.+|+|.
T Consensus 6 q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 85 (107)
T 1i8k_A 6 QSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGD 85 (107)
T ss_dssp EECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred eCCCeEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHHCEE
Confidence 3466788999999999999998888899999853 1 1221111111111345655545556789999999999999
Q ss_pred EEEEEEeCC
Q psy12695 225 YTCRAKNGA 233 (369)
Q Consensus 225 Y~C~a~n~~ 233 (369)
|.|.+.+..
T Consensus 86 Y~C~~~~~~ 94 (107)
T 1i8k_A 86 YYCLQSFNV 94 (107)
T ss_dssp EEEEECSSS
T ss_pred EEEEEeeCC
Confidence 999998753
No 172
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.02 E-value=1.2e-09 Score=89.53 Aligned_cols=82 Identities=43% Similarity=0.655 Sum_probs=67.0
Q ss_pred CeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCC
Q psy12695 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGA 233 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 233 (369)
...+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++. .....+.|.|.++..+|+|.|+|.|.|..
T Consensus 107 ~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~---------~~~--~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 175 (189)
T 2v5t_A 107 NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE---------KYI--LKGSNTELTVRNIINSDGGPYVCRATNKA 175 (189)
T ss_dssp EEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSS---------SEE--EETTTTEEEECSCCGGGCEEEEEEEEETT
T ss_pred cccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCC---------cEE--EecCCCEEEEcCCChhhCeeEEEEEEeCC
Confidence 4567889999999999999999999999987664321 111 12335679999999999999999999999
Q ss_pred ceEEEEEEEEEee
Q psy12695 234 GEVFTNISLNVIK 246 (369)
Q Consensus 234 g~~~~~~~l~v~~ 246 (369)
|.....+.|.|..
T Consensus 176 g~~~~~~~l~V~v 188 (189)
T 2v5t_A 176 GEDEKQAFLQVFV 188 (189)
T ss_dssp EEEEEEEEEEEEC
T ss_pred CceeEEEEEEEEe
Confidence 9999888888763
No 173
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.02 E-value=1.1e-09 Score=100.90 Aligned_cols=91 Identities=19% Similarity=0.406 Sum_probs=72.4
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+...... .... ...+.|.|.+++.+|+|.|
T Consensus 313 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~------~~~~----~~~~~L~i~~v~~~d~G~Y 382 (404)
T 3p3y_A 313 PYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPN------PNRE----VAGDTIIFRDTQISSRAVY 382 (404)
T ss_dssp EEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCC------TTEE----EETTEEEESSCCSSCCCEE
T ss_pred CeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCC------ceEE----ecCCEEEEeecCHHHCEEE
Confidence 44555667788999999999999999999999999999876532211 0111 1245899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEee
Q psy12695 226 TCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~ 246 (369)
+|.|.|..|.....+.|.|..
T Consensus 383 ~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 383 QCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp EEEEEETTEEEEEEEEEEEC-
T ss_pred EEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999999988754
No 174
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.01 E-value=1.6e-09 Score=90.37 Aligned_cols=83 Identities=20% Similarity=0.346 Sum_probs=64.0
Q ss_pred eeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCCc
Q psy12695 155 VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG 234 (369)
Q Consensus 155 ~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g 234 (369)
+.+.+|+.++|.|.+.|.|.|.+.|++...... .. .. ......+.|.|.+++.+|+|.|.|.|.|..|
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~---------~~-~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 78 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL---------NG-KV--TNEGTTSTLTMNPVSFGNEHSYLCTATCESR 78 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCC---------SS-EE--EEETTEEEEEESSCCGGGCSEEEEEEEETTE
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc---------cc-eE--EEcCCccEEEECcCCHHHCEEEEEEEEECCc
Confidence 345599999999999999999999988432110 00 10 1122356799999999999999999999999
Q ss_pred eEEEEEEEEEeecCC
Q psy12695 235 EVFTNISLNVIKVET 249 (369)
Q Consensus 235 ~~~~~~~l~v~~~~~ 249 (369)
..+..+.|.|...+.
T Consensus 79 ~~~~~~~l~V~~~p~ 93 (202)
T 1vca_A 79 KLEKGIQVEIYSFPK 93 (202)
T ss_dssp EEEEEEEEEEEBCCS
T ss_pred eEeeEEEEEEEeCCC
Confidence 888889999987654
No 175
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.01 E-value=5.2e-10 Score=102.70 Aligned_cols=76 Identities=26% Similarity=0.475 Sum_probs=66.5
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEE
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRA 229 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 229 (369)
..+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..+.|.|.++..+|+|.|+|.|
T Consensus 312 ~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~-------------------~~~~L~i~~v~~~d~G~Y~C~a 372 (388)
T 2v5m_A 312 IDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGH-------------------SESVLRIESVKKEDKGMYQCFV 372 (388)
T ss_dssp EESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSC-------------------CSSEEEESSCCGGGCEEEEEEE
T ss_pred cCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECcc-------------------CCCEEEEecCChhhCEEEEEEE
Confidence 345677889999999999999999999999999876532 2457999999999999999999
Q ss_pred EeCCceEEEEEEEEE
Q psy12695 230 KNGAGEVFTNISLNV 244 (369)
Q Consensus 230 ~n~~g~~~~~~~l~v 244 (369)
.|..|.....+.|.|
T Consensus 373 ~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 373 RNDRESAEASAELKL 387 (388)
T ss_dssp ECSSCEEEEEEEEEE
T ss_pred EcCCCcEEEEEEEEe
Confidence 999999999888876
No 176
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.01 E-value=3.9e-09 Score=86.56 Aligned_cols=88 Identities=31% Similarity=0.455 Sum_probs=67.8
Q ss_pred CCeeeccCCeEEEEEEeeCCCCCeEEEEeC--CeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEE
Q psy12695 153 PDVTAEENENVTLSCRATGSPVPKIKWIFK--EKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAK 230 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 230 (369)
....+.+|+.+.|.|.+.|.|.|.+.|+++ +..+..... ....++........+.|.|.+++.+|+|.|.|.|.
T Consensus 102 ~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 177 (192)
T 2va4_A 102 KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDK----SLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAA 177 (192)
T ss_dssp CCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCB----CTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEE
T ss_pred CcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeecccc----ccCCcEEEeeccCceEEEEecCCcccCEEEEEEEE
Confidence 345677899999999999999999999998 433322110 11223444444556789999999999999999999
Q ss_pred eCCceEEEEEEEEE
Q psy12695 231 NGAGEVFTNISLNV 244 (369)
Q Consensus 231 n~~g~~~~~~~l~v 244 (369)
|..|.....+.|.|
T Consensus 178 n~~g~~~~~~~l~V 191 (192)
T 2va4_A 178 SRIGGHQKSMYLDI 191 (192)
T ss_dssp CSSCEEEEEEEEEE
T ss_pred ecCCceEEEEEEEe
Confidence 99999988888877
No 177
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.00 E-value=1.8e-09 Score=90.61 Aligned_cols=97 Identities=23% Similarity=0.330 Sum_probs=71.1
Q ss_pred CCccCCCCCeeeccCCeEEEEEEe-eCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRA-TGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
|.+...+....+.+|+.+.|.|.+ .|.|.|.+.|++++..+.......... ..++.. ...+.|.|.+++.+|+|.
T Consensus 109 ~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~-~~~~~~---~~~~~L~i~~~~~~d~G~ 184 (217)
T 2vr9_A 109 DDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGA-SSRVRI---VDGGNLLISNVEPIDEGN 184 (217)
T ss_dssp CSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---C-CCSEEE---ETTTEEEESSCCSTTCEE
T ss_pred CCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCccccccccc-CCcEEe---cCCCcEEEeeCCHHHCeE
Confidence 445555677889999999999999 899999999999998776432211111 112211 134579999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEee
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~ 246 (369)
|+|.|.|..|.......+.+..
T Consensus 185 Y~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 185 YKCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp EEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEEcccceeccccEEEEEE
Confidence 9999999999987775555543
No 178
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.00 E-value=1.6e-09 Score=90.74 Aligned_cols=100 Identities=17% Similarity=0.228 Sum_probs=69.2
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEEcccCCCC
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 221 (369)
.+...+..+.+.+|+.++|.|.+.+.|.+.+.|++++ . .+.............++..........|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3nl4_L 3 VMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECAD 82 (213)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGG
T ss_pred cEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHH
Confidence 3444567789999999999999999999999999842 1 1111111111111235555445566789999999999
Q ss_pred CEEEEEEEEeCCc---eEEEEEEEEEee
Q psy12695 222 SGIYTCRAKNGAG---EVFTNISLNVIK 246 (369)
Q Consensus 222 ~G~Y~C~a~n~~g---~~~~~~~l~v~~ 246 (369)
+|.|.|.+.|..+ .......+.|..
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 110 (213)
T 3nl4_L 83 AATYYCQSTYENPTYVSFGGGTEVGVKG 110 (213)
T ss_dssp CEEEEEEECCSSTTTCEECCCEEEEEEC
T ss_pred CEEEEEecCCCCceeEEeCCCeEEEEeC
Confidence 9999999999876 344445666644
No 179
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.00 E-value=7.7e-10 Score=96.67 Aligned_cols=97 Identities=24% Similarity=0.408 Sum_probs=82.7
Q ss_pred ceEEEecCCCCCccCCC-C--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQ-L--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG 120 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~-~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 120 (369)
.+.++.++++++.+|.. + ...++.|+|++|+|. ...|.++++|++|+|++|+|+.+++..|..+++|+.|+|++
T Consensus 39 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 118 (270)
T 2o6q_A 39 TKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDR 118 (270)
T ss_dssp CSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCS
T ss_pred CCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCC
Confidence 56899999999988863 3 257899999999854 66789999999999999999999999999999999999999
Q ss_pred cceecccCCcccccCcCcccccc
Q psy12695 121 NPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 121 N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
|.|+.+++..|..+++|...++.
T Consensus 119 n~l~~~~~~~~~~l~~L~~L~Ls 141 (270)
T 2o6q_A 119 NQLKSLPPRVFDSLTKLTYLSLG 141 (270)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECC
T ss_pred CccCeeCHHHhCcCcCCCEEECC
Confidence 99999998888888887665554
No 180
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.00 E-value=1.2e-09 Score=89.78 Aligned_cols=89 Identities=20% Similarity=0.310 Sum_probs=67.0
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+..... .++.. ...+.|.|.+++.+|+|.|
T Consensus 101 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~-------~~~~~---~~~~~L~i~~~~~~d~G~Y 170 (191)
T 1epf_A 101 LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKD-------VRFIV---LSNNYLQIRGIKKTDEGTY 170 (191)
T ss_dssp SEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCC-------TTEEE---CTTSCEEETTCCGGGCEEE
T ss_pred ceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCC-------ceEEE---ecCCeEEECCCChhhCEEE
Confidence 4454556778889999999999999999999999999977643221 11211 1245799999999999999
Q ss_pred EEEEEeCCceEEEEEEEEE
Q psy12695 226 TCRAKNGAGEVFTNISLNV 244 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v 244 (369)
+|.|.|..|.......+.|
T Consensus 171 ~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 171 RCEGRILARGEINFKDIQV 189 (191)
T ss_dssp EEEEEEGGGTEEEEEEEEE
T ss_pred EEEEEEecceeEEEEEEEE
Confidence 9999999876555444444
No 181
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.99 E-value=1.1e-09 Score=84.66 Aligned_cols=95 Identities=19% Similarity=0.292 Sum_probs=65.5
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--eEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--KIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.+...|..+.+.+|++++|.|.+.+. +.+.|+++. ....... ....+|.+........|.|.+++.+|+|.
T Consensus 19 ~v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~-----~~~~r~~~~~~~~~~~L~I~~~~~~DsG~ 91 (133)
T 3khq_A 19 QIWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELV-----SEEGRIVQTQNGSVYTLTIQNIQYEDNGI 91 (133)
T ss_dssp SEEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECC-----CTTTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred ceEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEE-----EeCCCEEEEcCCCEEEEEECCCChHHCEE
Confidence 44556778899999999999999887 889999873 2111100 12335555545556789999999999999
Q ss_pred EEEEEEeCCce----EEEEEEEEEeecC
Q psy12695 225 YTCRAKNGAGE----VFTNISLNVIKVE 248 (369)
Q Consensus 225 Y~C~a~n~~g~----~~~~~~l~v~~~~ 248 (369)
|+|.+.|..|. ......|.|...+
T Consensus 92 Y~C~a~n~~g~~~~~~g~gt~L~V~~~p 119 (133)
T 3khq_A 92 YFCKQKCDSANHNVTDSCGTELLVLGFS 119 (133)
T ss_dssp EEEEESSCC-------CCCEEEEEC---
T ss_pred EEEEEEeCCCCcceeECCCEEEEEEecc
Confidence 99999998762 2344667776643
No 182
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.99 E-value=2.1e-09 Score=90.31 Aligned_cols=93 Identities=23% Similarity=0.271 Sum_probs=65.0
Q ss_pred CCeeeccCCeEEEEEEeeCCCC--CeEEEEeCCeEeeeccc-c-cccCCcceEEEEeecceeeEEEcccCCCCCEEEEEE
Q psy12695 153 PDVTAEENENVTLSCRATGSPV--PKIKWIFKEKIIANISS-G-LANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCR 228 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~--p~i~W~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 228 (369)
..+.+.+|+.++|.|.+.|.|. +.+.|++++..+..... . ........ ......+.|.|.+++.+|+|.|+|.
T Consensus 113 ~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~I~~v~~~D~G~Y~C~ 189 (213)
T 2x1w_L 113 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGS---EMKKFLSTLTIDGVTRSDQGLYTCA 189 (213)
T ss_dssp SCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSC---SCEEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCc---cceeeeEEEEECCCCcccCEEEEEE
Confidence 4458999999999999998654 47999998865321100 0 00000000 0011245799999999999999999
Q ss_pred EEeCCceEEEEEEEEEeecC
Q psy12695 229 AKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 229 a~n~~g~~~~~~~l~v~~~~ 248 (369)
|.|..|..+..+.|.|...+
T Consensus 190 a~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 190 ASSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp EECSSCEEEEEEEEEEEC--
T ss_pred EecCCCcEEEEEEEEEeccc
Confidence 99999999999999998765
No 183
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.99 E-value=3.1e-09 Score=94.13 Aligned_cols=89 Identities=28% Similarity=0.391 Sum_probs=72.3
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcc-cCCCCCEEEEEEEE
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVA-VTMSDSGIYTCRAK 230 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~-v~~~D~G~Y~C~a~ 230 (369)
+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+........|.|.+ +..+|+|.|+|.|.
T Consensus 111 ~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~---------~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~ 181 (305)
T 2nzi_A 111 MGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN---------GHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAK 181 (305)
T ss_dssp SCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSS---------SSCEEEECSSEEEEEETTCCCSTTCEEEEEEEE
T ss_pred cccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCC---------CcEEEEEcCCceEEEEecCCccCccEEEEEEEE
Confidence 35677889999999999999999999999988665421 122333334567899999 99999999999999
Q ss_pred eCCceEEEEEEEEEeecCC
Q psy12695 231 NGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 231 n~~g~~~~~~~l~v~~~~~ 249 (369)
|..|.....+.|.|...+.
T Consensus 182 N~~G~~~~~~~l~v~~~P~ 200 (305)
T 2nzi_A 182 NRFGIDQKTVELDVADVPD 200 (305)
T ss_dssp ETTEEEEEEEEEEEEBCCC
T ss_pred eCCCceeeEEEEEEecCCC
Confidence 9999999999999886653
No 184
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.98 E-value=3e-09 Score=79.74 Aligned_cols=98 Identities=21% Similarity=0.325 Sum_probs=66.4
Q ss_pred CCCCeeeccCCeEEEEEEeeCCCC-CeEEEEeCCe-----EeeecccccccCCcceEEEEe--ecceeeEEEcccCCCCC
Q psy12695 151 ITPDVTAEENENVTLSCRATGSPV-PKIKWIFKEK-----IIANISSGLANMNKRQYIIKT--INSLSNLTIVAVTMSDS 222 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p~-p~i~W~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~~D~ 222 (369)
.|..+.+.+|++++|.|.+.+... ..+.|+++.. .+.............++.+.. ......|.|.+++.+|+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~Ds 86 (113)
T 1zox_A 7 GPEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDA 86 (113)
T ss_dssp CCSEEEEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred CCCEEEEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHC
Confidence 356788999999999999976543 3599999652 122111110011123444432 23456899999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEEeecC
Q psy12695 223 GIYTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 223 G~Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
|.|.|.+.+........+.|.|...|
T Consensus 87 G~Y~C~v~~~~~~~~~~v~L~V~~~p 112 (113)
T 1zox_A 87 GIYWCGITKGGLDPMFKVTVNIGPVP 112 (113)
T ss_dssp EEEEEEECCSSSCCEEEEEEEEECC-
T ss_pred EEEEEeeEcCCCCccEEEEEEEEcCC
Confidence 99999998876666778888887543
No 185
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.98 E-value=1.9e-09 Score=80.57 Aligned_cols=87 Identities=14% Similarity=0.196 Sum_probs=61.4
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCe-----EeeecccccccCCcceEEEEeecceeeEEEcccCCCC
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEK-----IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 221 (369)
.+...|..+.+.+|++++|.|.+.+.+.+.+.|+++.. .+.............++..........|+|.+++.+|
T Consensus 6 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~D 85 (111)
T 1i3g_L 6 VLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSED 85 (111)
T ss_dssp CEEESCSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEEeCCEEEEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHHH
Confidence 34455677899999999999999888778899998641 1221111111111345655545556789999999999
Q ss_pred CEEEEEEEEeCC
Q psy12695 222 SGIYTCRAKNGA 233 (369)
Q Consensus 222 ~G~Y~C~a~n~~ 233 (369)
+|.|.|.+.+..
T Consensus 86 sG~Y~C~~~~~~ 97 (111)
T 1i3g_L 86 LADYFCQQYSSY 97 (111)
T ss_dssp CSEEEEEECSSS
T ss_pred CEEEEEEEecCC
Confidence 999999998753
No 186
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.97 E-value=1.1e-09 Score=92.63 Aligned_cols=88 Identities=25% Similarity=0.382 Sum_probs=70.5
Q ss_pred CCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeC
Q psy12695 153 PDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 232 (369)
....+.+|+.+.|.|.+.|.|.+.+.|++++..+....... . .........|.|.+++.+|+|.|+|.+.|.
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~------~--~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 98 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIG------G--YKVRNQHWSLIMESVVPSDKGNYTCVVENE 98 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTT------C--CEEEGGGTEEEECSCCGGGCEEEEEEEEET
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCcccccccccc------c--eeeecCcceEEEecCCcccCEEEEEEEecc
Confidence 67789999999999999999999999999998765322110 0 012234568999999999999999999999
Q ss_pred CceEEEEEEEEEeecC
Q psy12695 233 AGEVFTNISLNVIKVE 248 (369)
Q Consensus 233 ~g~~~~~~~l~v~~~~ 248 (369)
.|.....+.+.|...+
T Consensus 99 ~~~~~~~~~l~V~~~~ 114 (231)
T 3ojm_B 99 YGSINHTYHLDVVERS 114 (231)
T ss_dssp TEEEEEEEEEEEECCC
T ss_pred cCcccccEEEEEEcCC
Confidence 9998888888887643
No 187
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.97 E-value=1.7e-09 Score=95.02 Aligned_cols=86 Identities=35% Similarity=0.491 Sum_probs=68.2
Q ss_pred CeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCC
Q psy12695 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGA 233 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 233 (369)
...+.+|+.+.|.|.+.|.|.|.+.|++++..+...... ..++. .......|.|.+++.+|+|.|+|.|.|..
T Consensus 205 ~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~-----~~~~~--~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 277 (291)
T 1qz1_A 205 NATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEED-----DEKHI--FSDDSSELTIRNVDKNDEAEYVCIAENKA 277 (291)
T ss_dssp EEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--C-----CSSEE--ECTTSCEEEECSCCGGGCEEEEEEEEETT
T ss_pred ccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCC-----CcceE--EcCCCcEEEEEecChhcCEEEEEEEEeCC
Confidence 456789999999999999999999999999876532210 01111 22345689999999999999999999999
Q ss_pred ceEEEEEEEEEee
Q psy12695 234 GEVFTNISLNVIK 246 (369)
Q Consensus 234 g~~~~~~~l~v~~ 246 (369)
|.....+.|.|..
T Consensus 278 G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 278 GEQDASIHLKVFA 290 (291)
T ss_dssp EEEEEEEEEEEEC
T ss_pred CceEEEEEEEEEc
Confidence 9999999998864
No 188
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.97 E-value=2.9e-09 Score=81.53 Aligned_cols=100 Identities=21% Similarity=0.298 Sum_probs=68.1
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCC----CCeEEEEeCC-----eEeeecccccccCCcceEEEEeecceeeEEEcccC
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSP----VPKIKWIFKE-----KIIANISSGLANMNKRQYIIKTINSLSNLTIVAVT 218 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p----~p~i~W~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 218 (369)
+...|..+.+.+|++++|.|.+.+.+ .+.+.|++.. ..+.............++..........|+|.+++
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~v~ 83 (126)
T 4ffy_L 4 LTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVE 83 (126)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCC
T ss_pred EEeCCCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECCCC
Confidence 34456678999999999999998876 5679999853 12221111111112345655555567789999999
Q ss_pred CCCCEEEEEEEEeCCceEE-EEEEEEEeec
Q psy12695 219 MSDSGIYTCRAKNGAGEVF-TNISLNVIKV 247 (369)
Q Consensus 219 ~~D~G~Y~C~a~n~~g~~~-~~~~l~v~~~ 247 (369)
.+|+|.|.|.+.+...... ....|.|...
T Consensus 84 ~~DsG~Y~C~~~~~~~~~fg~gT~L~V~~~ 113 (126)
T 4ffy_L 84 TDDAATYYCQQNNEDPYTFGGGTKLEIKGG 113 (126)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEEC-
T ss_pred HHHCEEEEEEEecCCCcEECCCEEEEEecC
Confidence 9999999999988654433 3366777654
No 189
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.96 E-value=2.7e-09 Score=93.63 Aligned_cols=97 Identities=19% Similarity=0.283 Sum_probs=71.0
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeC-CCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATG-SPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g-~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
|.+...+....+.+|+.+.|.|.+.| .|.+.+.|++++..+........ ... .....+.|.|.+++.+|+|.
T Consensus 187 p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~--~~~-----~~~~~~~L~i~~v~~~d~G~ 259 (289)
T 3ejj_X 187 PQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDF--QDN-----YYKKVRALSLNAVDFQDAGI 259 (289)
T ss_dssp CEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEE--CSS-----SEEEEEEEEESSCCSSSCEE
T ss_pred CeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCccc--ccc-----eEEeeEEEEEEeecccCCEE
Confidence 44444456677789999999999988 78999999999876643211100 000 11125689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
|+|.|.|..|...+.+.|.+...+.
T Consensus 260 Y~C~a~N~~G~~~~s~~L~~~~~~~ 284 (289)
T 3ejj_X 260 YSCVASNDVGTRTATMNFQVVESHH 284 (289)
T ss_dssp EEEEEECSSCEEEEEEEEECC----
T ss_pred EEEEEEcCCCCccccEEEEEEeccc
Confidence 9999999999999999998876543
No 190
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.96 E-value=1.3e-09 Score=99.82 Aligned_cols=87 Identities=28% Similarity=0.558 Sum_probs=72.0
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+ ..+.|.|.++..+|+|.|
T Consensus 295 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~---------~~~~~----~~~~L~i~~v~~~d~G~Y 361 (382)
T 1cs6_A 295 PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQ---------NRIEV----SGGELRFSKLVLEDSGMY 361 (382)
T ss_dssp EEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCC---------SSEEE----ETTEEEESSCCGGGCEEE
T ss_pred CCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCC---------ceEEE----ECCEEEECcCCcccCEEE
Confidence 44555567788999999999999999999999999999876532 12222 235899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEe
Q psy12695 226 TCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~ 245 (369)
+|.|.|..|.....+.|.|.
T Consensus 362 ~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 362 QCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEeCCCeEEEEEEEEEe
Confidence 99999999999999998885
No 191
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.96 E-value=1.7e-09 Score=92.30 Aligned_cols=97 Identities=21% Similarity=0.335 Sum_probs=67.3
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEe----CCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEE
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIF----KEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTC 227 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 227 (369)
+....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+........ .....+........+.|.|.++..+|+|.|+|
T Consensus 121 ~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 199 (241)
T 3grw_A 121 PANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYV-TVLKSWISESVEADVRLRLANVSERDGGEYLC 199 (241)
T ss_dssp TCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCE-EEEEEEECSBSEEEEEEEECSCCGGGCEEEEE
T ss_pred CccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceee-eeeeEeeeeecCCceEEEECcCCcccCcEEEE
Confidence 567788999999999999999999999999 5544332111100 00000000111235689999999999999999
Q ss_pred EEEeCCceEEEEEEEEEeecCC
Q psy12695 228 RAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 228 ~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|.|..|.....+.|.|..++.
T Consensus 200 ~a~N~~g~~~~~~~l~V~~~p~ 221 (241)
T 3grw_A 200 RATNFIGVAEKAFWLSVHGPRA 221 (241)
T ss_dssp EEECSSCEEEEEEEEEC-----
T ss_pred EEecCcceEEEEEEEEecCCCC
Confidence 9999999999999999987664
No 192
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.96 E-value=3.6e-09 Score=83.04 Aligned_cols=103 Identities=18% Similarity=0.264 Sum_probs=67.7
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC-----eEeeecccccccCCcceEEEEeecceeeEEEcccCCC
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-----KIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMS 220 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 220 (369)
+.+...+..+.+.+|++++|.|.+.+.+.+.+.|+++. ..+.............+|..........|+|.+++.+
T Consensus 17 ~~v~q~p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~~ 96 (146)
T 2yc1_B 17 IVLTQSPATLSVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEPE 96 (146)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred ceEEEeCCEEEEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCHH
Confidence 33445567788999999999999988877889999854 1222211111111234666555556678999999999
Q ss_pred CCEEEEEEEEeCCceEE-EEEEEEEeecC
Q psy12695 221 DSGIYTCRAKNGAGEVF-TNISLNVIKVE 248 (369)
Q Consensus 221 D~G~Y~C~a~n~~g~~~-~~~~l~v~~~~ 248 (369)
|+|.|.|.+.+...... ....|.|....
T Consensus 97 DsG~Y~C~~~~~~~~~fg~GT~L~V~~~~ 125 (146)
T 2yc1_B 97 DFAIYYCQQYRYSPRTFGQGTKVEIKRAA 125 (146)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEEC---
T ss_pred HCEEEEEEEecCCCCeECCCEEEEEeCCc
Confidence 99999999987643222 23456665443
No 193
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.96 E-value=6.4e-09 Score=91.32 Aligned_cols=101 Identities=16% Similarity=0.305 Sum_probs=73.6
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCC-CCeEEEEe-CCeEeeecccccccCCcceEEE-EeecceeeEEEcccCCCCC
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSP-VPKIKWIF-KEKIIANISSGLANMNKRQYII-KTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p-~p~i~W~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~I~~v~~~D~ 222 (369)
+.+...|.+..+.+|+.+.|.|.+.|.| .+.+.|++ ++..+... ..++.+ ......+.|.|.+++.+|+
T Consensus 3 ~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~--------~~~~~~~~~~~~~~~L~i~~~~~~D~ 74 (291)
T 1qz1_A 3 LQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPN--------QQRISVVWNDDDSSTLTIYNANIDDA 74 (291)
T ss_dssp CCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSS--------CSSEEEEEEETTEEEEEECSCCGGGC
T ss_pred cceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccC--------CceEEEEEcCCCeEEEEEecCCCCCC
Confidence 3455567888999999999999999987 68999999 55444311 112222 2234567899999999999
Q ss_pred EEEEEEEEeCCce-EEEEEEEEEeecCCcccCC
Q psy12695 223 GIYTCRAKNGAGE-VFTNISLNVIKVETAVAQP 254 (369)
Q Consensus 223 G~Y~C~a~n~~g~-~~~~~~l~v~~~~~~~~~~ 254 (369)
|.|.|.+.|..|. .+..+.|.|...+.....+
T Consensus 75 G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~ 107 (291)
T 1qz1_A 75 GIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAP 107 (291)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEECCSEEEECC
T ss_pred EEEEEEEEcCCCCeeEEEEEEEeeccccccCCC
Confidence 9999999999864 5677888887665443333
No 194
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.96 E-value=8.6e-10 Score=100.66 Aligned_cols=58 Identities=29% Similarity=0.407 Sum_probs=47.5
Q ss_pred CCcccCeeeccCCcccccCCcccccccccccccccccceecccCCcccccCcCccccc
Q psy12695 85 KLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 85 ~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~ 142 (369)
++++|+.|+|++|+|+.+++.+|.++++|+.|+|++|.|+.++++.|.++++|...++
T Consensus 62 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 62 RLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 5677888888888888888888888888888888888888888888888877665444
No 195
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.95 E-value=1.7e-09 Score=82.79 Aligned_cols=96 Identities=19% Similarity=0.263 Sum_probs=63.5
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCC---eEEEEeCCeEe--eecccc------cccCCcceEEEEe---ecceeeEEEc
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVP---KIKWIFKEKII--ANISSG------LANMNKRQYIIKT---INSLSNLTIV 215 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p---~i~W~~~~~~~--~~~~~~------~~~~~~~~~~~~~---~~~~~~L~I~ 215 (369)
..+..+.+..|++++|.|.+...+.+ .|.|++++... ...... ....-..+..+.. ..+...|.|.
T Consensus 10 ~~~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~ 89 (125)
T 4gos_A 10 VTTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK 89 (125)
T ss_dssp EEEECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEES
T ss_pred ccCceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEEC
Confidence 34456778899999999998654433 58999865321 000000 0000011222211 1234689999
Q ss_pred ccCCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy12695 216 AVTMSDSGIYTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
+++.+|+|.|.|.+.|..|..++.+.|.|=
T Consensus 90 ~v~~~D~G~Y~C~v~~~~g~~~~~v~LkVG 119 (125)
T 4gos_A 90 NVQLTDAGTYKCYIITSKGKGNANLEYKTG 119 (125)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCChHHCEEEEEEEEeCCCeEEEEEEEEEC
Confidence 999999999999999999999999988873
No 196
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.95 E-value=1.4e-09 Score=91.61 Aligned_cols=84 Identities=18% Similarity=0.315 Sum_probs=68.4
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ....|.|.+++.+|+|.|
T Consensus 119 p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~------------------~~~~L~i~~v~~~d~G~Y 180 (218)
T 3k0w_A 119 LQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE------------------TKKLYMVPYVDLEHQGTY 180 (218)
T ss_dssp CEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTC------------------CSSEEEESSCCGGGCEEE
T ss_pred ceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCC------------------CCCEEEEeecChhcCEEE
Confidence 44455567788999999999999999999999999998765421 134799999999999999
Q ss_pred EEEEEeCCce-EEEEEEEEEeec
Q psy12695 226 TCRAKNGAGE-VFTNISLNVIKV 247 (369)
Q Consensus 226 ~C~a~n~~g~-~~~~~~l~v~~~ 247 (369)
+|.|.|..|. .+..+.|.|...
T Consensus 181 ~C~a~n~~g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 181 WCHVYNDRDSQDSKKVEIIIDEL 203 (218)
T ss_dssp EEEEECSSCEEECCCEEEEECC-
T ss_pred EEEEEcCCCCceeeeEEEEEeCC
Confidence 9999998887 556677777653
No 197
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=98.95 E-value=1.4e-09 Score=95.17 Aligned_cols=96 Identities=28% Similarity=0.344 Sum_probs=75.2
Q ss_pred ceEEEecCCCCCccCCCC--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQL--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGN 121 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N 121 (369)
.+.++.+++.++.++. + ...++.|+|++|.|. +..|.++++|++|+|++|+|+.+++..|..+++|+.|+|++|
T Consensus 65 L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 143 (272)
T 3rfs_A 65 VRYLALGGNKLHDISA-LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHN 143 (272)
T ss_dssp CCEEECTTSCCCCCGG-GTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CcEEECCCCCCCCchh-hcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCC
Confidence 5678888888887653 3 356888888888855 456888888888888888888888888888888888888888
Q ss_pred ceecccCCcccccCcCcccccc
Q psy12695 122 PIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 122 ~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
.|+.+++..|..+++|...++.
T Consensus 144 ~l~~~~~~~~~~l~~L~~L~l~ 165 (272)
T 3rfs_A 144 QLQSLPKGVFDKLTNLTELDLS 165 (272)
T ss_dssp CCCCCCTTTTTTCTTCCEEECC
T ss_pred ccCccCHHHhccCccCCEEECC
Confidence 8888888778777776655443
No 198
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.95 E-value=4.2e-09 Score=87.42 Aligned_cols=91 Identities=18% Similarity=0.148 Sum_probs=66.7
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCC-----CeEEEEeCCeEeeecccccccCCcceEEEEe---ecceeeEEEcccCCCC
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPV-----PKIKWIFKEKIIANISSGLANMNKRQYIIKT---INSLSNLTIVAVTMSD 221 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~-----p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~L~I~~v~~~D 221 (369)
..+..+.+.+|+.+.|.|.+.+.|. +.+.|++.+....... .++.+.. ..+...|.|.+++.+|
T Consensus 7 ~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~--------~r~~~~~~~~~~~~~~L~I~~v~~~D 78 (202)
T 3bp6_B 7 APKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQS--------ERATLLEEQLPLGKALFHIPSVQVRD 78 (202)
T ss_dssp CSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBC--------SSCEECGGGGGGTEEEEEECSCCGGG
T ss_pred cCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccC--------CceEEeeccccCCeeEEEECCCCHHH
Confidence 3445688999999999999999886 8899999443322111 1111111 1145789999999999
Q ss_pred CEEEEEEEEeCCceEEEEEEEEEeecC
Q psy12695 222 SGIYTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 222 ~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
+|.|.|.+.|..|.....+.|.|...+
T Consensus 79 ~G~Y~C~~~~~~~~~~~~~~l~V~~~~ 105 (202)
T 3bp6_B 79 SGQYRCLVICGAAWDYKYLTVKVKASY 105 (202)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEBCC
T ss_pred CcEEEEEEEeCCCcceEEEEEEecCCC
Confidence 999999999999988888888888654
No 199
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=98.94 E-value=1.8e-09 Score=94.45 Aligned_cols=97 Identities=27% Similarity=0.372 Sum_probs=78.1
Q ss_pred ceEEEecCCCCCccCCCC---CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQL---DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG 120 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~---~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 120 (369)
.+.++.++++++.+|... ...++.|+|++|+|. +..|.++++|+.|+|++|+|+.+++..|..+++|+.|+|++
T Consensus 87 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 166 (272)
T 3rfs_A 87 LTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSY 166 (272)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCC
Confidence 567888888888877654 357888999998855 55688888899999999998888888888888899999999
Q ss_pred cceecccCCcccccCcCcccccc
Q psy12695 121 NPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 121 N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
|.|+.+++..|..+++|...++.
T Consensus 167 n~l~~~~~~~~~~l~~L~~L~L~ 189 (272)
T 3rfs_A 167 NQLQSLPEGVFDKLTQLKDLRLY 189 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcCccCHHHhcCCccCCEEECC
Confidence 98888888888877776655443
No 200
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.94 E-value=1.5e-09 Score=90.58 Aligned_cols=79 Identities=19% Similarity=0.303 Sum_probs=61.0
Q ss_pred CeeeccCCeEEEEEEeeCC-CCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeC
Q psy12695 154 DVTAEENENVTLSCRATGS-PVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 232 (369)
...+.+|+.+.|.|.+.+. |.+.+.|++++..+.. ....+.|.|.+++.+|+|.|+|.|.|.
T Consensus 97 ~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~-----------------~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 159 (204)
T 3sgj_C 97 RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY-----------------FHHNSDFYIPKATLKDSGSYFCRGLVG 159 (204)
T ss_dssp CSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE-----------------EEECCCEEESSCCGGGCEEEEEEEEET
T ss_pred ceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec-----------------ccCCceEEECcCCcccCEEEEEEEEeC
Confidence 3678899999999999665 5688999999976532 112468999999999999999999994
Q ss_pred -CceEEEEEEEEEeecCC
Q psy12695 233 -AGEVFTNISLNVIKVET 249 (369)
Q Consensus 233 -~g~~~~~~~l~v~~~~~ 249 (369)
.+..+..+.|.|...+.
T Consensus 160 ~~~~~s~~~~l~V~~~~~ 177 (204)
T 3sgj_C 160 SKNVSSETVQITITQGLA 177 (204)
T ss_dssp TEEEECCCEEEEEEC---
T ss_pred CCceecCcEEEEEeCcCC
Confidence 44566678888876553
No 201
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.93 E-value=2.2e-09 Score=90.15 Aligned_cols=98 Identities=27% Similarity=0.426 Sum_probs=69.6
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+..+.+.+|+.+.|.|.+.|.|.+.+.|++++..+...... ..++..........+.|.+++.+|+|.
T Consensus 9 ~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~-----~~~~~~~~~~~~~~l~i~~v~~~d~G~ 83 (217)
T 2vr9_A 9 SPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKK-----SHRVQFKDGALFFYRTMQGKKEQDGGE 83 (217)
T ss_dssp CCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSS-----SSEEECTTSCEEESSCCBSSSCBCCEE
T ss_pred CCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCcc-----ceeEEecCCceEEEEEeccCCcccCce
Confidence 466666778899999999999999999999999999998876542211 111111000111234788999999999
Q ss_pred EEEEEEeCCceEE-EEEEEEEeec
Q psy12695 225 YTCRAKNGAGEVF-TNISLNVIKV 247 (369)
Q Consensus 225 Y~C~a~n~~g~~~-~~~~l~v~~~ 247 (369)
|+|.+.|..|... ..+.+.|...
T Consensus 84 Y~C~~~n~~g~~~~~~~~l~v~~~ 107 (217)
T 2vr9_A 84 YWCVAKNRVGQAVSRHASLQIAVL 107 (217)
T ss_dssp EEEEEEETTEEEECCCEEEEECEE
T ss_pred EEEEEecCCCccccccceEEEEEe
Confidence 9999999998763 3566666653
No 202
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.93 E-value=1.9e-09 Score=89.88 Aligned_cols=100 Identities=20% Similarity=0.358 Sum_probs=69.1
Q ss_pred CCCccCCCCCeeeccCCeEEEEEE-eeCCCCCeEEEEeCCe-EeeecccccccCCcceEEEEeecceeeEEEcccCCCCC
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCR-ATGSPVPKIKWIFKEK-IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~-~~g~p~p~i~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 222 (369)
.|.+...+....+.+|+.+.|.|. +.|.|.|.+.|++++. .+.............++. .....+.|.|.+++.+|+
T Consensus 104 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~L~i~~~~~~d~ 181 (212)
T 1f97_A 104 PPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFT--IDPKSGDLIFDPVTAFDS 181 (212)
T ss_dssp CCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEE--ECTTTCCEEESSCCGGGC
T ss_pred CCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeE--ecCCCceEEEEecChhhC
Confidence 344443344567899999999999 7999999999999998 654322211111111221 223457899999999999
Q ss_pred EEEEEEEEeCCceE--EEEEEEEEee
Q psy12695 223 GIYTCRAKNGAGEV--FTNISLNVIK 246 (369)
Q Consensus 223 G~Y~C~a~n~~g~~--~~~~~l~v~~ 246 (369)
|.|+|.|.|..|.. +..+.|.|..
T Consensus 182 G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 182 GEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp EEEEEEEECSSSCCEECCCEEEEEES
T ss_pred cEEEEEEccccCCccccceEEEEEEE
Confidence 99999999999987 4456666654
No 203
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.93 E-value=4.3e-09 Score=85.72 Aligned_cols=82 Identities=27% Similarity=0.435 Sum_probs=65.8
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCC-eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVP-KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
.|.+...+....+.+|+.+.|.|.+.|.|.| .+.|++++..+.... .....|.|.++ +|+|
T Consensus 98 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~----------------~~~~~L~i~~~--~d~G 159 (182)
T 1rhf_A 98 VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPA----------------PSPSVLNVTGV--TQST 159 (182)
T ss_dssp SCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSE----------------ESSEEEEECCC--SSCE
T ss_pred CCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCC----------------CCceEEEEecc--ccCe
Confidence 4555556677889999999999999999999 999999987664211 03568999988 5899
Q ss_pred EEEEEEEeCCceEEE-EEEEEE
Q psy12695 224 IYTCRAKNGAGEVFT-NISLNV 244 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~-~~~l~v 244 (369)
.|+|.|.|..|.... .+.|.|
T Consensus 160 ~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 160 MFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp EEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEECCCCCcccceEEEEe
Confidence 999999999998753 677665
No 204
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.93 E-value=2.8e-09 Score=86.53 Aligned_cols=77 Identities=21% Similarity=0.379 Sum_probs=61.1
Q ss_pred CCeeeccCCeEEEEEEeeCCCCC-eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 153 PDVTAEENENVTLSCRATGSPVP-KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
....+.+|+.+.|.|.+.+.+++ .+.|++++..+.. ......|.|.+++.+|+|.|.|.|.|
T Consensus 96 ~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~-----------------~~~~~~L~i~~v~~~d~G~Y~C~a~n 158 (175)
T 1fnl_A 96 PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY-----------------FHHNSDFHIPKATLKDSGSYFCRGLV 158 (175)
T ss_dssp SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE-----------------EEECCCEEESSCCGGGCEEEEEEEEE
T ss_pred CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC-----------------CCCCCEEEEcccChhhCeEEEEEEEc
Confidence 44668899999999999887665 8999999876632 11256899999999999999999999
Q ss_pred CCce-EEEEEEEEEee
Q psy12695 232 GAGE-VFTNISLNVIK 246 (369)
Q Consensus 232 ~~g~-~~~~~~l~v~~ 246 (369)
..|. .+..+.|.|..
T Consensus 159 ~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 159 GSKNVSSETVNITITQ 174 (175)
T ss_dssp TTEEEECCCEEEEEEC
T ss_pred CCCCccCccEEEEEeC
Confidence 7664 45567777654
No 205
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.92 E-value=3.5e-09 Score=97.29 Aligned_cols=90 Identities=28% Similarity=0.359 Sum_probs=69.9
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
+..+.+.+|+.+.|.|.+.|.|.|.+.|+++++...... .+ .....+.|.|.+++.+|+|.|+|.|.|
T Consensus 212 ~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~--------~~----~~~~~~~L~I~~v~~~D~G~Y~C~a~N 279 (384)
T 3kld_A 212 PETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARK--------AR----RHKSNGILEIPNFQQEDAGSYECVAEN 279 (384)
T ss_dssp CSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTT--------CE----ECTTSCEEEECSCCGGGCEEEEEEEEE
T ss_pred CCceEecCCCcEEEEEEEeecCCCcEEEEeCCCcccccc--------ce----ecCCCcEEEECCCChhhCEEEEEEEEc
Confidence 345667899999999999999999999999654322110 00 112356899999999999999999999
Q ss_pred CCceEEEEEEEEEeecCCcccC
Q psy12695 232 GAGEVFTNISLNVIKVETAVAQ 253 (369)
Q Consensus 232 ~~g~~~~~~~l~v~~~~~~~~~ 253 (369)
..|.....+.|.|...|.....
T Consensus 280 ~~G~~~~~~~l~v~~~P~~~~~ 301 (384)
T 3kld_A 280 SRGKNVAKGQLTFYAQPNWVQI 301 (384)
T ss_dssp TTEEEEEEEEEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEEecCCccccC
Confidence 9999999999998877654433
No 206
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.92 E-value=5.8e-09 Score=95.71 Aligned_cols=97 Identities=20% Similarity=0.319 Sum_probs=74.3
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+..... .++.+........|.|.++..+|+|.
T Consensus 100 ~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~-------~~~~~~~~~~~~~L~i~~~~~~d~G~ 172 (389)
T 2jll_A 100 APKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNT-------TNLKTYSTGRKMILEIAPTSDNDFGR 172 (389)
T ss_dssp EEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTC-------TTEEEEECSSCEEEEECCCSTTSSEE
T ss_pred CCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccC-------ceEEEeccCCEEEEEECCCChhhCEE
Confidence 34454444445788999999999999999999999999977653221 12223333345689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecC
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
|.|.|.|..|.....+.+.+...+
T Consensus 173 Y~C~a~N~~G~~~~~~~l~v~~~P 196 (389)
T 2jll_A 173 YNCTATNHIGTRFQEYILALADVP 196 (389)
T ss_dssp EEEEEEETTEEEEEEEEEEECCCC
T ss_pred EEEEEEcCCCcEEEEEEEEecCCC
Confidence 999999999998888888775544
No 207
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.92 E-value=4.6e-09 Score=87.55 Aligned_cols=100 Identities=24% Similarity=0.397 Sum_probs=71.8
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeeccc--ccc-cCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISS--GLA-NMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ... .....++... .+.|.|.+++.+|+|.
T Consensus 4 v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~----~~~L~i~~v~~~D~G~ 79 (212)
T 1f97_A 4 VYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS----SSGITFSSVTRKDNGE 79 (212)
T ss_dssp EECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE----TTEEEESCCCGGGCEE
T ss_pred EEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee----ceeEEEcccCcccCeE
Confidence 44556788899999999999999999999999997754321100 000 0011122221 2789999999999999
Q ss_pred EEEEEEeCCc--eEEEEEEEEEeecCCcc
Q psy12695 225 YTCRAKNGAG--EVFTNISLNVIKVETAV 251 (369)
Q Consensus 225 Y~C~a~n~~g--~~~~~~~l~v~~~~~~~ 251 (369)
|.|.+.|..| .....+.|.|...+...
T Consensus 80 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~ 108 (212)
T 1f97_A 80 YTCMVSEEGGQNYGEVSIHLTVLVPPSKP 108 (212)
T ss_dssp EEEEEEETTSSSEEEEEEEEEEEBCCCCC
T ss_pred EEEEEEccCCCcccEEEEEEEEEcCCCCc
Confidence 9999999877 56777888888766543
No 208
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.92 E-value=2.8e-09 Score=89.80 Aligned_cols=87 Identities=29% Similarity=0.391 Sum_probs=71.0
Q ss_pred CCCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 144 CSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 144 c~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
..+.+...+..+.+.+|+.+.|.|.+.|.|.+.+.|++++..+... ..+.|.|.+++.+|+|
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~------------------~~~~L~i~~v~~~d~G 78 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG------------------NTSELIFNAVHVKDAG 78 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC------------------CSSEEEETTCCGGGCE
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC------------------CCCEEEEccCChhhCe
Confidence 3466777888999999999999999999999999999998765321 2457999999999999
Q ss_pred EEEEEEEeCCceE-EEEEEEEEeecC
Q psy12695 224 IYTCRAKNGAGEV-FTNISLNVIKVE 248 (369)
Q Consensus 224 ~Y~C~a~n~~g~~-~~~~~l~v~~~~ 248 (369)
.|.|.+.|..|.. +..+.|.|...+
T Consensus 79 ~Y~C~~~n~~~~~~s~~~~l~V~~~~ 104 (218)
T 3k0w_A 79 FYVCRVNNNFTFEFSQWSQLDVCDIP 104 (218)
T ss_dssp EEEEEEECTTCCEECCCEEEEEECCC
T ss_pred EeEEEEEcCCCCceeeEEEEEEEccC
Confidence 9999999998764 555777776653
No 209
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.92 E-value=7.4e-09 Score=77.87 Aligned_cols=97 Identities=19% Similarity=0.246 Sum_probs=63.3
Q ss_pred CCCeeeccCCeEEEEEEe-eCCCCCe----EEEEeCCeEe--ee--cccccccCCcceEEEEee---c--ceeeEEEccc
Q psy12695 152 TPDVTAEENENVTLSCRA-TGSPVPK----IKWIFKEKII--AN--ISSGLANMNKRQYIIKTI---N--SLSNLTIVAV 217 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~-~g~p~p~----i~W~~~~~~~--~~--~~~~~~~~~~~~~~~~~~---~--~~~~L~I~~v 217 (369)
+..+.+.+|++++|.|.+ .+.+.+. +.|++++... .. ...........+...... . ....|.|.++
T Consensus 7 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 86 (118)
T 3udw_C 7 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGL 86 (118)
T ss_dssp CSEEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSC
T ss_pred CCeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeec
Confidence 445889999999999999 4555444 9999974221 00 000000001222222111 0 1568999999
Q ss_pred CCCCCEEEEEEEEe-CCceEEEEEEEEEeecC
Q psy12695 218 TMSDSGIYTCRAKN-GAGEVFTNISLNVIKVE 248 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n-~~g~~~~~~~l~v~~~~ 248 (369)
+.+|+|.|.|.+.+ ..|.....+.|.|..+|
T Consensus 87 ~~~D~G~Y~C~v~~~~~~~~~~~~~L~V~~~P 118 (118)
T 3udw_C 87 RVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKP 118 (118)
T ss_dssp CGGGCEEEEEEEEEETTEEEEEEEEEEEEC--
T ss_pred ChHHCeEEEEEEEECCCCCccceEEEEEEeCC
Confidence 99999999999998 78888888889887653
No 210
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.92 E-value=7.6e-09 Score=90.86 Aligned_cols=103 Identities=22% Similarity=0.384 Sum_probs=76.2
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEe-CCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIF-KEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
.|.+...+.++.+.+|+.+.|.|.+.|.|. .+.|++ ++..+.. ..++..........|.|.+++.+|+|
T Consensus 4 ~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~---------~~~~~~~~~~~~~~L~i~~~~~~D~G 73 (291)
T 2wim_A 4 LLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIS---------TQRVVVQKEGVRSRLTIYNANIEDAG 73 (291)
T ss_dssp CCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCC---------BTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred CceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccC---------CCcEEEecCCCEEEEEEccCCcccCE
Confidence 466666778899999999999999999875 899999 4443321 12333333444568999999999999
Q ss_pred EEEEEEEeCCceE-EEEEEEEEeecCCcccCCCCc
Q psy12695 224 IYTCRAKNGAGEV-FTNISLNVIKVETAVAQPDPV 257 (369)
Q Consensus 224 ~Y~C~a~n~~g~~-~~~~~l~v~~~~~~~~~~~~~ 257 (369)
.|.|.+.|..|.. ...+.|.|...+.....+...
T Consensus 74 ~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~ 108 (291)
T 2wim_A 74 IYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQ 108 (291)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSE
T ss_pred EEEEEEecccCceEEEEEEEEecCCcceEeCCCCh
Confidence 9999999998876 566788887766544444333
No 211
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.92 E-value=1.8e-09 Score=87.63 Aligned_cols=79 Identities=22% Similarity=0.281 Sum_probs=62.4
Q ss_pred CCeeeccCCeEEEEEEe-eCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 153 PDVTAEENENVTLSCRA-TGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... ...+.|.|.+++.+|+|.|+|.|.|
T Consensus 93 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~-----------------~~~~~L~i~~v~~~d~G~Y~C~a~n 155 (176)
T 1f2q_A 93 SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW-----------------YENHNISITNATVEDSGTYYCTGKV 155 (176)
T ss_dssp SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC-----------------CCSSEEEESSCCGGGCEEEEEEEEE
T ss_pred CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee-----------------cCCCeEEECCCCcccCEEEEEEEEe
Confidence 34577899999999999 56777799999998765311 1246899999999999999999999
Q ss_pred CCce-EEEEEEEEEeecC
Q psy12695 232 GAGE-VFTNISLNVIKVE 248 (369)
Q Consensus 232 ~~g~-~~~~~~l~v~~~~ 248 (369)
..+. .+..+.|.|...+
T Consensus 156 ~~~~~~s~~~~l~V~~~p 173 (176)
T 1f2q_A 156 WQLDYESEPLNITVIKAP 173 (176)
T ss_dssp TTEEEECCCEEEEEECSC
T ss_pred CCcceEecCEEEEEecCC
Confidence 7544 4556888887765
No 212
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.92 E-value=4.2e-09 Score=88.15 Aligned_cols=98 Identities=16% Similarity=0.251 Sum_probs=67.5
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC---e--EeeecccccccCCcceEEEEeecceeeEEEcccCCCC
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE---K--IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 221 (369)
.+...+..+.+.+|+.++|.|.+.+.|.+.+.|++.. . .+.............++..........|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3r06_A 3 QMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESED 82 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCccc
Confidence 3444567789999999999999999999999999843 1 1111111111112335555445567799999999999
Q ss_pred CEEEEEEEEeCCce-EEEEEEEEE
Q psy12695 222 SGIYTCRAKNGAGE-VFTNISLNV 244 (369)
Q Consensus 222 ~G~Y~C~a~n~~g~-~~~~~~l~v 244 (369)
+|.|.|.+.|..+. ......|.|
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 83 IGSYYCQQYYNYPWTFGPGTKLEI 106 (213)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEE
T ss_pred CEEEEEecccCCceEEcCCceEEE
Confidence 99999999987653 333456666
No 213
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.92 E-value=7.7e-09 Score=78.05 Aligned_cols=96 Identities=22% Similarity=0.376 Sum_probs=66.6
Q ss_pred CCCCeeeccCCeEEEEEEeeC--CCCCeEEEEeCCeEeeeccccc---c-cCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 151 ITPDVTAEENENVTLSCRATG--SPVPKIKWIFKEKIIANISSGL---A-NMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g--~p~p~i~W~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.+..+.+.+|++++|.|.+.+ .+.+.+.|++++..+....... . ..-..|+.+ .....|.|.+++.+|+|.
T Consensus 9 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~---~~~~sL~I~~v~~~D~G~ 85 (117)
T 3q0h_A 9 TTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAP---GPGLGLTLQSLTVNDTGE 85 (117)
T ss_dssp ESCCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEE---CSTTCEEECSCCGGGCEE
T ss_pred ccCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEe---CCceEEEEeeCChhhCEE
Confidence 356788999999999999987 3344699999875443221100 0 000123332 235689999999999999
Q ss_pred EEEEEE-eCCceEEEEEEEEEeecCC
Q psy12695 225 YTCRAK-NGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 225 Y~C~a~-n~~g~~~~~~~l~v~~~~~ 249 (369)
|+|.+. +..|.....+.|.|..++.
T Consensus 86 Y~C~v~~~~~g~~~~~~~L~V~~pp~ 111 (117)
T 3q0h_A 86 YFCIYHTYPDGTYTGRIFLEVLESSV 111 (117)
T ss_dssp EEEEEEEETTCCEEEEEEEEEECC--
T ss_pred EEEEEEECCCCCeEEEEEEEEEccCc
Confidence 999974 5678888899999988764
No 214
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.91 E-value=4.5e-09 Score=89.68 Aligned_cols=88 Identities=25% Similarity=0.398 Sum_probs=70.5
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
+..+.+.+|+.+.|.|.+.|.|.+.+.|++++..+....... . .........|.|.+++.+|+|.|+|.+.|
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~----~----~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 93 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIG----G----IKLRHQQWSLVMESVVPSDRGNYTCVVEN 93 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTT----C----CEEEGGGTEEEECSCCGGGCEEEEEEEEE
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCccc----c----eeeeccceEEEEEeCCcccCEEEEEEEee
Confidence 456789999999999999999999999999998765322110 0 01223456899999999999999999999
Q ss_pred CCceEEEEEEEEEeec
Q psy12695 232 GAGEVFTNISLNVIKV 247 (369)
Q Consensus 232 ~~g~~~~~~~l~v~~~ 247 (369)
..|.....+.+.|...
T Consensus 94 ~~~~~~~~~~l~V~~~ 109 (241)
T 3grw_A 94 KFGSIRQTYTLDVLER 109 (241)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred cCCceEEEEEEEEecc
Confidence 9999888888888764
No 215
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.91 E-value=6e-09 Score=78.22 Aligned_cols=84 Identities=14% Similarity=0.255 Sum_probs=58.8
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCC------CeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEEcccC
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPV------PKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTIVAVT 218 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~------p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 218 (369)
..|..+.+.+|++++|.|.+.+.+. +.+.|+++. . .+.............++..........|.|.+++
T Consensus 6 q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 85 (114)
T 1eeq_A 6 QSPDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQ 85 (114)
T ss_dssp EECSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred ecCCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCCC
Confidence 3467789999999999999988763 679999853 1 1221111111111345655545556789999999
Q ss_pred CCCCEEEEEEEEeCC
Q psy12695 219 MSDSGIYTCRAKNGA 233 (369)
Q Consensus 219 ~~D~G~Y~C~a~n~~ 233 (369)
.+|+|.|.|.+.+..
T Consensus 86 ~~DsG~Y~C~~~~~~ 100 (114)
T 1eeq_A 86 AEDVAVYYCQQYYSH 100 (114)
T ss_dssp GGGCEEEEEEECSSS
T ss_pred cccCEEEEEEEeeCC
Confidence 999999999998753
No 216
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.91 E-value=3.3e-09 Score=94.02 Aligned_cols=88 Identities=23% Similarity=0.355 Sum_probs=64.2
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEE
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYT 226 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 226 (369)
.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+..... ...+...|.|.++ +|+|.|+
T Consensus 207 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~-------------~~~~~~~L~i~~~--~d~G~Y~ 271 (304)
T 2yd9_A 207 RFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDD-------------MPVGRNVLELTDV--KDSANYT 271 (304)
T ss_dssp EEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSS-------------CCBSEEEEEECSC--CSCEEEE
T ss_pred cEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCccc-------------ccCCcEEEEEccc--ccCEEEE
Confidence 334445667789999999999999999999999999977643211 0112345777665 6999999
Q ss_pred EEEEeCCceEEEEEEEEEeecCC
Q psy12695 227 CRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 227 C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
|.|.|..|.....+.|.|...+.
T Consensus 272 C~a~N~~G~~~~~~~l~V~~~~~ 294 (304)
T 2yd9_A 272 CVAMSSLGVIEAVAQITVKSLPK 294 (304)
T ss_dssp EEEEETTEEEEEEEEEC------
T ss_pred EEEEeCCCcEEEEEEEEEecCcc
Confidence 99999999999999999887654
No 217
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.90 E-value=3.3e-09 Score=81.56 Aligned_cols=99 Identities=16% Similarity=0.227 Sum_probs=66.2
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCC-CCeEEEEeCC--e---Eeeeccccc-ccCCcceEEEEe--ecceeeEEEcccCCC
Q psy12695 150 PITPDVTAEENENVTLSCRATGSP-VPKIKWIFKE--K---IIANISSGL-ANMNKRQYIIKT--INSLSNLTIVAVTMS 220 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p-~p~i~W~~~~--~---~~~~~~~~~-~~~~~~~~~~~~--~~~~~~L~I~~v~~~ 220 (369)
..|..+.+.+|++++|.|.+.+.. ...+.|+++. + .+....... ......+|.+.. ......|.|.+++.+
T Consensus 6 Q~P~~~~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~ 85 (129)
T 3rrq_A 6 FSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRN 85 (129)
T ss_dssp EECSEEEEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGG
T ss_pred ECCCEEEEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChh
Confidence 446778999999999999998765 4579999742 1 121111110 011123555542 334678999999999
Q ss_pred CCEEEEEEEEeCCceE----EEEEEEEEeecC
Q psy12695 221 DSGIYTCRAKNGAGEV----FTNISLNVIKVE 248 (369)
Q Consensus 221 D~G~Y~C~a~n~~g~~----~~~~~l~v~~~~ 248 (369)
|+|.|.|.+.+..+.. ...+.|.|...+
T Consensus 86 Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~~ 117 (129)
T 3rrq_A 86 DSGTYLCGAISLAPKLQIKESLRAELRVTERR 117 (129)
T ss_dssp GCEEEEEEEEECGGGCEEEECCCEEEEEECCC
T ss_pred HCEEEEEEEEecCCCceeeEeceEEEEEecCc
Confidence 9999999999977654 445788887654
No 218
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.90 E-value=2.9e-09 Score=97.85 Aligned_cols=85 Identities=27% Similarity=0.554 Sum_probs=69.1
Q ss_pred CCccCCCCC-eeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 146 PNIRPITPD-VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 146 p~i~~~~~~-~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
|.+...+.. ..+.+|+.+.|.|.+.|.|.|.+.|++++..+... ++.. ..+.|.|.++..+|+|.
T Consensus 309 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~----------~~~~----~~~~L~i~~~~~~d~G~ 374 (395)
T 1bih_A 309 PKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG----------RATV----TDSGLVIKGVKNGDKGY 374 (395)
T ss_dssp EEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS----------SEEE----ETTEEEESSCCSTTCEE
T ss_pred CccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC----------ceEE----ECCEEEEeeCCcccCEE
Confidence 344444555 77899999999999999999999999999776421 2222 13489999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEE
Q psy12695 225 YTCRAKNGAGEVFTNISLNV 244 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v 244 (369)
|+|.|.|..|.....+.|.|
T Consensus 375 Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 375 YGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp EEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEccCCCceEEEEEEE
Confidence 99999999999999888877
No 219
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.90 E-value=5.4e-09 Score=85.47 Aligned_cols=93 Identities=25% Similarity=0.527 Sum_probs=65.9
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+...... ++.. ...+.|.|.+++.+|+|.|
T Consensus 3 ~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~-------~~~~---~~~~~L~i~~~~~~d~G~Y 72 (189)
T 2v5t_A 3 LTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDN-------RFAM---LANNNLQILNINKSDEGIY 72 (189)
T ss_dssp CEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCT-------TEEE---CTTSCEEETTCCGGGCEEE
T ss_pred ceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCC-------eEEE---ecCCCEEEeeCCHhHCcEE
Confidence 45556678889999999999999999999999999998766432211 2211 1245799999999999999
Q ss_pred EEEEEeCCceE--EEEEEEEEeecC
Q psy12695 226 TCRAKNGAGEV--FTNISLNVIKVE 248 (369)
Q Consensus 226 ~C~a~n~~g~~--~~~~~l~v~~~~ 248 (369)
.|.+.|..+.. ...+.+.+..++
T Consensus 73 ~C~~~~~~~~~~~~~~~~l~v~~~p 97 (189)
T 2v5t_A 73 RCEGRVEARGEIDFRDIIVIVNVPP 97 (189)
T ss_dssp EEEEEETTTTEEEEEEEEEEEEEEE
T ss_pred EEEEEEcCCCceEEEEEEEEecCCC
Confidence 99999987543 345566665554
No 220
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.90 E-value=4.1e-09 Score=89.13 Aligned_cols=92 Identities=20% Similarity=0.346 Sum_probs=69.2
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEe----CCeEeeecccccccCCcceEEEE----eecceeeEEEcccCCCCCE
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIF----KEKIIANISSGLANMNKRQYIIK----TINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~L~I~~v~~~D~G 223 (369)
+....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+....... ..... .....+.|.|.++..+|+|
T Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~L~i~~~~~~d~G 198 (231)
T 3ojm_B 125 PANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPY------LKVLKHSGINSSNAEVLALFNVTEADAG 198 (231)
T ss_dssp SCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBC------EEEEEECSTTCSCTTEEEECSCCGGGCE
T ss_pred CCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcce------EeEecccccccCCccEEEEecCCHHHCe
Confidence 567888999999999999999999999999 554432211100 00000 0122357999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 224 IYTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|+|.|.|..|.....+.|.|...+.
T Consensus 199 ~Y~C~a~n~~g~~~~~~~l~V~~~p~ 224 (231)
T 3ojm_B 199 EYICKVSNYIGQANQSAWLTVLPKQQ 224 (231)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCC-
T ss_pred EEEEEEEeccceEeeEEEEEEecCCC
Confidence 99999999999999999999987664
No 221
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.90 E-value=4.3e-09 Score=78.63 Aligned_cols=83 Identities=20% Similarity=0.282 Sum_probs=58.3
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCC----CCeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEEcccCCC
Q psy12695 150 PITPDVTAEENENVTLSCRATGSP----VPKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMS 220 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p----~p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 220 (369)
..|..+.+.+|++++|.|.+.+.+ .+.+.|+++. . .+.............++.+........|.|.+++.+
T Consensus 6 q~p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 85 (111)
T 1j05_L 6 QSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEAD 85 (111)
T ss_dssp EECSEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred EeCCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCCcc
Confidence 346678899999999999998876 4679999853 2 122111111111134565554555678999999999
Q ss_pred CCEEEEEEEEeC
Q psy12695 221 DSGIYTCRAKNG 232 (369)
Q Consensus 221 D~G~Y~C~a~n~ 232 (369)
|+|.|.|.+.+.
T Consensus 86 DsG~Y~C~~~~~ 97 (111)
T 1j05_L 86 DVATYYCQQTNE 97 (111)
T ss_dssp GCEEEEEEECSS
T ss_pred cCEEEEEEEecC
Confidence 999999999875
No 222
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.90 E-value=5.6e-09 Score=87.38 Aligned_cols=80 Identities=21% Similarity=0.283 Sum_probs=60.0
Q ss_pred CCCeeeccCCeEEEEEEee-CCCCCeEEEEeCCeEeeecccccccCCcceEEEEeec--ceeeEEEcccCCCCCEEEEEE
Q psy12695 152 TPDVTAEENENVTLSCRAT-GSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTIN--SLSNLTIVAVTMSDSGIYTCR 228 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~ 228 (369)
+.++.+.+|+.+.|.|.+. +.|.|.|.|++++..+.... ++.+.... +...|.|.+++.+|+|.|+|.
T Consensus 9 ~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~---------~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~ 79 (207)
T 3rbs_A 9 ELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGP---------KYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQ 79 (207)
T ss_dssp EEEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSS---------SCEEEECTTTCEEEEEESCCCGGGCEEEEEE
T ss_pred CCceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCC---------CEEEEEeCCCCEEEEEECCCChhhCEEEEEE
Confidence 4568899999999999996 47999999999998875322 12222222 345799999999999999999
Q ss_pred EEeCCceEEEEEEE
Q psy12695 229 AKNGAGEVFTNISL 242 (369)
Q Consensus 229 a~n~~g~~~~~~~l 242 (369)
|.| |.......+
T Consensus 80 a~N--g~a~~~~~~ 91 (207)
T 3rbs_A 80 LQD--GKATNHSTV 91 (207)
T ss_dssp EEE--TTEEEEEEE
T ss_pred EEC--CCeEEEEEE
Confidence 999 444444443
No 223
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.90 E-value=1.8e-09 Score=87.13 Aligned_cols=93 Identities=24% Similarity=0.211 Sum_probs=52.4
Q ss_pred ceEEEecCCCCC--ccCCCC--CCCccEEEeecceeCh-hhccCCcccCeeeccCCcccccCCccccccccccccccccc
Q psy12695 47 KETVLCKAKNFT--TIPEQL--DVGTQVLDLSDNFLDR-YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGN 121 (369)
Q Consensus 47 ~~~~~c~~~~l~--~ip~~~--~~~~~~L~l~~n~i~~-~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N 121 (369)
.+.++.++++++ .+|..+ ...++.|+|++|.|.. ..|.++++|+.|+|++|+|+...+..|..+++|+.|+|++|
T Consensus 26 L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 105 (168)
T 2ell_A 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGN 105 (168)
T ss_dssp CSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCCSSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSS
T ss_pred CCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCChhhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCC
Confidence 345666666665 565543 2356666666666442 35556666666666666666644445555666666666666
Q ss_pred ceecccC-CcccccCcCcc
Q psy12695 122 PIQKITH-EAFINVPKLNL 139 (369)
Q Consensus 122 ~l~~~~~-~~f~~l~~l~~ 139 (369)
.|+.++. ..|..+++|..
T Consensus 106 ~l~~~~~~~~l~~l~~L~~ 124 (168)
T 2ell_A 106 KLKDISTLEPLKKLECLKS 124 (168)
T ss_dssp SCCSSGGGGGGSSCSCCCE
T ss_pred ccCcchhHHHHhcCCCCCE
Confidence 6666543 44555555443
No 224
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.89 E-value=2.7e-09 Score=95.91 Aligned_cols=98 Identities=24% Similarity=0.338 Sum_probs=69.2
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEe----CCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEE
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIF----KEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTC 227 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 227 (369)
+....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.......................+.|.|.+++.+|+|.|+|
T Consensus 229 ~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 308 (334)
T 1ry7_B 229 PANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTC 308 (334)
T ss_dssp SCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEE
T ss_pred CCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEE
Confidence 467889999999999999999999999999 4443322111000000000000001123479999999999999999
Q ss_pred EEEeCCceEEEEEEEEEeecCC
Q psy12695 228 RAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 228 ~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|.|..|.....+.|.|...+.
T Consensus 309 ~a~N~~G~~~~~~~l~V~~~~~ 330 (334)
T 1ry7_B 309 LAGNSIGFSHHSAWLVVLPAEE 330 (334)
T ss_dssp EEEESSCCEEEEEEEEEECSCC
T ss_pred EEeCCCCeEEEEEEEEEEECCC
Confidence 9999999999999999987654
No 225
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.89 E-value=1.4e-09 Score=87.69 Aligned_cols=96 Identities=23% Similarity=0.238 Sum_probs=80.3
Q ss_pred ceEEEecCCCCCccCCCC--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCC-cccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQL--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPS-HILDSILELRELKLSG 120 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~-~~f~~l~~L~~L~L~~ 120 (369)
.+.++.+++.++.+ ..+ ...++.|+|++|+|. +..|.++++|+.|+|++|+|+.++. ..|..+++|+.|+|++
T Consensus 51 L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~ 129 (168)
T 2ell_A 51 LEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFN 129 (168)
T ss_dssp CCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCS
T ss_pred CCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeC
Confidence 57899999999988 444 357999999999976 4567789999999999999999865 6789999999999999
Q ss_pred cceecccC---CcccccCcCcccccc
Q psy12695 121 NPIQKITH---EAFINVPKLNLEDFA 143 (369)
Q Consensus 121 N~l~~~~~---~~f~~l~~l~~~~~~ 143 (369)
|+++.++. ..|..+++|...++.
T Consensus 130 N~l~~~~~~~~~~~~~l~~L~~L~l~ 155 (168)
T 2ell_A 130 CEVTNLNDYRESVFKLLPQLTYLDGY 155 (168)
T ss_dssp SGGGTSTTHHHHHHTTCSSCCEETTE
T ss_pred CcCcchHHHHHHHHHhCccCcEecCC
Confidence 99999887 578888887765554
No 226
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.89 E-value=1.8e-09 Score=104.14 Aligned_cols=94 Identities=26% Similarity=0.293 Sum_probs=80.9
Q ss_pred ceEEEecCCCCCccCCCCC--CCccEEEeecceeC--hhhccCCcccCeeeccCCcccccCCcccccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQLD--VGTQVLDLSDNFLD--RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~~--~~~~~L~l~~n~i~--~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~ 122 (369)
.+.+++++|+|+.+|. +. ..++.|+|++|+|. +..|.++++|+.|+|++|+|+.|| .|..+++|+.|+|++|.
T Consensus 443 L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~lp--~l~~l~~L~~L~Ls~N~ 519 (567)
T 1dce_A 443 VRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD--GVANLPRLQELLLCNNR 519 (567)
T ss_dssp CSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCG--GGTTCSSCCEEECCSSC
T ss_pred ceEEEecCCCCCCCcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCCCc--ccCCCCCCcEEECCCCC
Confidence 4579999999999987 53 47999999999987 568999999999999999999987 68999999999999999
Q ss_pred eeccc-CCcccccCcCcccccc
Q psy12695 123 IQKIT-HEAFINVPKLNLEDFA 143 (369)
Q Consensus 123 l~~~~-~~~f~~l~~l~~~~~~ 143 (369)
|+.+. +..|..+++|...++.
T Consensus 520 l~~~~~p~~l~~l~~L~~L~L~ 541 (567)
T 1dce_A 520 LQQSAAIQPLVSCPRLVLLNLQ 541 (567)
T ss_dssp CCSSSTTGGGGGCTTCCEEECT
T ss_pred CCCCCCcHHHhcCCCCCEEEec
Confidence 99997 7788888887665544
No 227
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.89 E-value=3.4e-09 Score=87.67 Aligned_cols=89 Identities=15% Similarity=0.127 Sum_probs=64.8
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...|.. .+.+|+.++|.|.+.+ +.+.+.|++++..+...... .......+.|.|.+++.+|+|.|
T Consensus 6 P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~----------~~~~~~~~~L~i~~v~~~D~G~Y 73 (196)
T 3p2t_A 6 PTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQN----------PLEPKNKARFSIPSMTEDYAGRY 73 (196)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEEC----------CCSSSSEEEEEESSCCGGGCEEE
T ss_pred CEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccc----------cccCCceEEEEeccCCcccCceE
Confidence 444444555 7899999999999988 67899999988654321100 00112357899999999999999
Q ss_pred EEEEEeCCce--EEEEEEEEEee
Q psy12695 226 TCRAKNGAGE--VFTNISLNVIK 246 (369)
Q Consensus 226 ~C~a~n~~g~--~~~~~~l~v~~ 246 (369)
.|.|.|..|. .+..+.|.|..
T Consensus 74 ~C~a~n~~g~~~~s~~~~l~V~~ 96 (196)
T 3p2t_A 74 RCYYRSPVGWSQPSDPLELVMTG 96 (196)
T ss_dssp EEEEEETTEEBCCCCCEEEEEEC
T ss_pred EEEEeCCCcccCCCccEEEEecC
Confidence 9999999883 35556777754
No 228
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.89 E-value=1.9e-09 Score=92.28 Aligned_cols=91 Identities=13% Similarity=0.233 Sum_probs=80.1
Q ss_pred CceEEEecCCCCCccCCCC---CCCccEEEeecce----eChhhccCCcccCeeeccC-CcccccCCccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQL---DVGTQVLDLSDNF----LDRYTFRKLINLVELDLSY-NQIQFVPSHILDSILELRELK 117 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~---~~~~~~L~l~~n~----i~~~~f~~l~~L~~L~Ls~-N~l~~i~~~~f~~l~~L~~L~ 117 (369)
..+.++.++++++.+|... ...++.|+|++|+ |.+.+|.++++|++|+|++ |+|+.+++.+|.++++|+.|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 3678999999999998743 3579999999996 4577999999999999999 999999999999999999999
Q ss_pred ccccceecccCCcccccCcCc
Q psy12695 118 LSGNPIQKITHEAFINVPKLN 138 (369)
Q Consensus 118 L~~N~l~~~~~~~f~~l~~l~ 138 (369)
|++|.++.++. |..+.+|.
T Consensus 112 l~~n~l~~lp~--~~~l~~L~ 130 (239)
T 2xwt_C 112 IFNTGLKMFPD--LTKVYSTD 130 (239)
T ss_dssp EEEECCCSCCC--CTTCCBCC
T ss_pred CCCCCCccccc--cccccccc
Confidence 99999999875 77777665
No 229
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.89 E-value=1.5e-09 Score=96.46 Aligned_cols=83 Identities=18% Similarity=0.253 Sum_probs=66.4
Q ss_pred CCeeeccCCeEEEEEEeeCCCCC-eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 153 PDVTAEENENVTLSCRATGSPVP-KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
....+..|+.++|.|.+.|.|.| .+.|++++..+.... ...+...|.|.+++.+|+|.|+|.|.|
T Consensus 220 ~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~--------------~~~~~~~l~i~~v~~~d~G~Y~C~A~N 285 (308)
T 4fom_A 220 DGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGL--------------LASDNTLHFVHPLTFNYSGVYICKVTN 285 (308)
T ss_dssp CSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSC--------------BCSTTEEECCSCCCSCCCSEEEEEEEE
T ss_pred ceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcE--------------EEcCCeEEEECCCChhhCEEEEEEEEe
Confidence 44566789999999999999998 599999887654211 011234577889999999999999999
Q ss_pred CCceEEEEEEEEEeecCC
Q psy12695 232 GAGEVFTNISLNVIKVET 249 (369)
Q Consensus 232 ~~g~~~~~~~l~v~~~~~ 249 (369)
..|..+..+.|.|..+|.
T Consensus 286 ~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 286 SLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp TTEEEEEEEECCEECCC-
T ss_pred CCCcEEEEEEEEEEcCCC
Confidence 999999999999988764
No 230
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.88 E-value=9.5e-09 Score=86.24 Aligned_cols=99 Identities=11% Similarity=0.208 Sum_probs=67.7
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCC-CCCeEEEEeCC---e--Eeeeccc----ccccCCcceEEEEeecceeeEEEcc
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGS-PVPKIKWIFKE---K--IIANISS----GLANMNKRQYIIKTINSLSNLTIVA 216 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~---~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~L~I~~ 216 (369)
.+...+ .+.+.+|+.++|.|.+.+. |.+.+.|++.. . .+..... ........++.+........|.|.+
T Consensus 3 ~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (218)
T 3s96_B 3 VLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISN 81 (218)
T ss_dssp SEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESS
T ss_pred eEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEcc
Confidence 344455 7889999999999999998 89999999832 1 1111111 0000112345444455677899999
Q ss_pred cCCCCCEEEEEEEEeCCc-----eEEEEEEEEEee
Q psy12695 217 VTMSDSGIYTCRAKNGAG-----EVFTNISLNVIK 246 (369)
Q Consensus 217 v~~~D~G~Y~C~a~n~~g-----~~~~~~~l~v~~ 246 (369)
++.+|+|.|.|.+.|..| .....+.|.|..
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 116 (218)
T 3s96_B 82 IQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLG 116 (218)
T ss_dssp CCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEES
T ss_pred CCcccCEEEEEEEecCCCCceeEEEcCcEEEEEec
Confidence 999999999999999876 233446777764
No 231
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.88 E-value=3.2e-09 Score=95.52 Aligned_cols=97 Identities=27% Similarity=0.333 Sum_probs=84.1
Q ss_pred CceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~ 122 (369)
..+.+++++++++.+|..++..++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++..|..+++|+.|+|++|.
T Consensus 172 ~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 251 (330)
T 1xku_A 172 KLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNK 251 (330)
T ss_dssp TCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSC
T ss_pred CcCEEECCCCccccCCccccccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCc
Confidence 3578999999999999999999999999999965 6789999999999999999999999899999999999999999
Q ss_pred eecccCCcccccCcCcccccc
Q psy12695 123 IQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 123 l~~~~~~~f~~l~~l~~~~~~ 143 (369)
|+.++. .|..++.|...++.
T Consensus 252 l~~lp~-~l~~l~~L~~L~l~ 271 (330)
T 1xku_A 252 LVKVPG-GLADHKYIQVVYLH 271 (330)
T ss_dssp CSSCCT-TTTTCSSCCEEECC
T ss_pred CccCCh-hhccCCCcCEEECC
Confidence 998875 36666666554443
No 232
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.88 E-value=5.1e-09 Score=92.87 Aligned_cols=79 Identities=22% Similarity=0.293 Sum_probs=65.1
Q ss_pred eeeccCCeEEEEEEeeCCCCC-eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCC
Q psy12695 155 VTAEENENVTLSCRATGSPVP-KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGA 233 (369)
Q Consensus 155 ~~~~~G~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 233 (369)
..+.+|+.+.|.|.+.|.|.| .+.|++++..+...... .+ ..+...|.|.+++.+|+|.|.|.|.|..
T Consensus 231 ~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~---------~~--~~~~~~L~I~~v~~~d~G~Y~C~a~N~~ 299 (312)
T 2y23_A 231 WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKH---------DF--KDGICTLLITEFSKKDAGIYEVILKDDR 299 (312)
T ss_dssp EEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC---------------CEEEEEECSCSGGGCEEEEEEEESTT
T ss_pred EEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcE---------EE--ECCEEEEEECcCCHHHCEEEEEEEEcCC
Confidence 578899999999999999998 99999999887642211 11 1235689999999999999999999999
Q ss_pred ceEEEEEEEEE
Q psy12695 234 GEVFTNISLNV 244 (369)
Q Consensus 234 g~~~~~~~l~v 244 (369)
|.....+.|.+
T Consensus 300 G~~~~~~~l~i 310 (312)
T 2y23_A 300 GKDKSRLKLVD 310 (312)
T ss_dssp CCEEEEEEECS
T ss_pred CceeeeeEEEe
Confidence 99998888765
No 233
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.88 E-value=1.1e-09 Score=86.43 Aligned_cols=92 Identities=20% Similarity=0.191 Sum_probs=51.8
Q ss_pred eEEEecCCCCC--ccCCCC--CCCccEEEeecceeCh-hhccCCcccCeeeccCCcccccCCcccccccccccccccccc
Q psy12695 48 ETVLCKAKNFT--TIPEQL--DVGTQVLDLSDNFLDR-YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122 (369)
Q Consensus 48 ~~~~c~~~~l~--~ip~~~--~~~~~~L~l~~n~i~~-~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~ 122 (369)
+.+++++++++ .+|..+ ...++.|+|++|+|.. ..|.++++|+.|+|++|+|+...+..|..+++|+.|+|++|.
T Consensus 20 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~ 99 (149)
T 2je0_A 20 KELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNK 99 (149)
T ss_dssp SEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCCTTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSC
T ss_pred eEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCchhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCc
Confidence 45666666665 555433 2356666666666543 445566666666666666666334445556666666666666
Q ss_pred eeccc-CCcccccCcCcc
Q psy12695 123 IQKIT-HEAFINVPKLNL 139 (369)
Q Consensus 123 l~~~~-~~~f~~l~~l~~ 139 (369)
|+.++ ...|..+++|..
T Consensus 100 i~~~~~~~~~~~l~~L~~ 117 (149)
T 2je0_A 100 IKDLSTIEPLKKLENLKS 117 (149)
T ss_dssp CCSHHHHGGGGGCTTCCE
T ss_pred CCChHHHHHHhhCCCCCE
Confidence 66553 244555555443
No 234
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.88 E-value=6.7e-09 Score=92.45 Aligned_cols=97 Identities=21% Similarity=0.283 Sum_probs=70.2
Q ss_pred CCccCCCCC-eeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEe------ecceeeEEEcccC
Q psy12695 146 PNIRPITPD-VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT------INSLSNLTIVAVT 218 (369)
Q Consensus 146 p~i~~~~~~-~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~L~I~~v~ 218 (369)
|.+...+.. +.+.+|+.+.|.|.+.|.|.|.+.|++++..+........ ...+.... ....+.|.|.+++
T Consensus 209 P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~L~i~~v~ 285 (315)
T 1itb_B 209 PVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLG---EDYYSVENPANKRRSTLITVLNISEIE 285 (315)
T ss_dssp CEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEE---EEEEEECCSSCGGGEEEEEEEEESSCC
T ss_pred CEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCccccccc---ccceeeeccCCCceeEEEEEEEEeecC
Confidence 344333332 5789999999999999999999999999887654221100 00111100 0124589999999
Q ss_pred CCC-CEEEEEEEEeCCceEEEEEEEEEe
Q psy12695 219 MSD-SGIYTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 219 ~~D-~G~Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
.+| +|.|+|.|.|..|.....+.|.|.
T Consensus 286 ~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 286 SRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp GGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred HHHcCCceEEEEecCCCceeEEEEEEec
Confidence 999 999999999999999999888774
No 235
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.87 E-value=8.5e-09 Score=96.09 Aligned_cols=100 Identities=14% Similarity=0.206 Sum_probs=64.8
Q ss_pred cccccCC-----CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEE
Q psy12695 139 LEDFACS-----PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLT 213 (369)
Q Consensus 139 ~~~~~c~-----p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 213 (369)
..+|.|. +++...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+..... . . ........|.
T Consensus 37 ~~~l~c~~~p~~~~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~--~--~------~~~~~~~sL~ 106 (423)
T 3qs7_E 37 PEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPH--F--D------LQNRGVVSMV 106 (423)
T ss_dssp -------------------CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCB--C-------------CEEEEE
T ss_pred HHHcCCccCCCCCcceeccccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccce--e--c------cccceEEEEE
Confidence 3456662 2344455688999999999999999999999999999876542111 0 0 0011134699
Q ss_pred EcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecC
Q psy12695 214 IVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 214 I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
|.+++.+|+|.|+|.|.|..|.....+.|.|...+
T Consensus 107 I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 141 (423)
T 3qs7_E 107 ILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTL 141 (423)
T ss_dssp ESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC---
T ss_pred EeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCc
Confidence 99999999999999999999999888888887543
No 236
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.87 E-value=1.1e-08 Score=85.29 Aligned_cols=82 Identities=17% Similarity=0.254 Sum_probs=66.3
Q ss_pred CeeeccCCeEEEEEEeeCCCCC--eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 154 DVTAEENENVTLSCRATGSPVP--KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
.+.+..|++++|.|.+ |.|.| .|.|++.+..+ ++ . ........|.|.+++.+|+|.|.|.|.|
T Consensus 16 ~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l----------~~-~---~~~~~~~~L~I~~v~~~d~G~Y~C~a~n 80 (210)
T 1gsm_A 16 VVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL----------GA-V---QSDTGRSVLTVRNASLSAAGTRVCVGSC 80 (210)
T ss_dssp EEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT----------CC-E---EEESSEEEEEECSCCGGGCEEEEEEEEE
T ss_pred ceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc----------Cc-E---EecCCccEEEECccCcccCceEEEEEEe
Confidence 3689999999999999 99888 99999854221 11 1 1124467899999999999999999999
Q ss_pred CCceEEEEEEEEEeecCCc
Q psy12695 232 GAGEVFTNISLNVIKVETA 250 (369)
Q Consensus 232 ~~g~~~~~~~l~v~~~~~~ 250 (369)
..|.....+.|.|...|..
T Consensus 81 ~~~~~~~~~~ltV~~~P~~ 99 (210)
T 1gsm_A 81 GGRTFQHTVQLLVYAFPNQ 99 (210)
T ss_dssp TTEEEEEEEEEEEEBCCSE
T ss_pred CCCceEEEEEEEEEecCCC
Confidence 9999888999999987643
No 237
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.87 E-value=1.3e-08 Score=76.15 Aligned_cols=84 Identities=15% Similarity=0.262 Sum_probs=58.5
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCC-----CCeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEEcccCC
Q psy12695 150 PITPDVTAEENENVTLSCRATGSP-----VPKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTM 219 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p-----~p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 219 (369)
..|..+.+.+|++++|.|.+.+.+ .+.+.|++.. . .+.............++..........|.|.+++.
T Consensus 6 q~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~ 85 (113)
T 1dlf_L 6 QTPLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEA 85 (113)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG
T ss_pred EeCCEEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCh
Confidence 346678999999999999998766 4679999853 1 12211111111113456555455567899999999
Q ss_pred CCCEEEEEEEEeCC
Q psy12695 220 SDSGIYTCRAKNGA 233 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~ 233 (369)
+|+|.|.|.+.+..
T Consensus 86 ~DsG~Y~C~~~~~~ 99 (113)
T 1dlf_L 86 EDLGVYFCSQSTHV 99 (113)
T ss_dssp GGCEEEEEEECSSS
T ss_pred HHCEEEEEEEecCC
Confidence 99999999998753
No 238
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.87 E-value=3.4e-09 Score=92.77 Aligned_cols=98 Identities=17% Similarity=0.149 Sum_probs=84.8
Q ss_pred CceEEEecCCCCCccCC-CC--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPE-QL--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLS 119 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~-~~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 119 (369)
..+.++.++++++.++. .+ ...++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++.+|.++++|+.|+|+
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 35789999999998886 33 357999999999954 6789999999999999999999999999999999999999
Q ss_pred ccceecccCCcccccCcCcccccc
Q psy12695 120 GNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 120 ~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
+|.+..+....|..+++|...++.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~ 132 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVA 132 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECC
T ss_pred CCCccccCchhcccCCCCCEEECc
Confidence 999999988888888887665544
No 239
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.87 E-value=1e-08 Score=80.18 Aligned_cols=97 Identities=18% Similarity=0.218 Sum_probs=65.3
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC-----eEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-----KIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
..|..+.+.+|++++|.|.+.+.+...+.|++.. ..+.............+|..........|+|.+++.+|+|.
T Consensus 5 Q~p~~v~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~DsG~ 84 (143)
T 3u6r_L 5 QSPATLSLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISNLEPEDFAV 84 (143)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred ECCCEEEEeCCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCCEEEEEEccCcccCCEE
Confidence 4466788999999999999988777789999853 12222111111112345665555567799999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEee
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~ 246 (369)
|+|.+.+..........|.|..
T Consensus 85 Y~C~~~~~~~~fg~gt~L~V~~ 106 (143)
T 3u6r_L 85 YYCQQRSDWVTFGGGTKVEIKA 106 (143)
T ss_dssp EEEEECSSBCEECCCEEEEEC-
T ss_pred EEEEEecCCCEECCCEEEEECC
Confidence 9999976542222335566653
No 240
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.86 E-value=1.5e-08 Score=85.75 Aligned_cols=96 Identities=22% Similarity=0.263 Sum_probs=63.8
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCC---eEEEEeCCeEee--eccccc------ccCCcceEEEE---eecceeeEEEccc
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVP---KIKWIFKEKIIA--NISSGL------ANMNKRQYIIK---TINSLSNLTIVAV 217 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p---~i~W~~~~~~~~--~~~~~~------~~~~~~~~~~~---~~~~~~~L~I~~v 217 (369)
...+.+.+|++++|.|.+.+.+.+ .|.|++++.... ....+. ...-..+.... ...+...|.|.++
T Consensus 11 ~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 90 (226)
T 4f80_A 11 SGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNV 90 (226)
T ss_dssp SSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSC
T ss_pred CCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeC
Confidence 345889999999999999887665 599999764211 000000 00001111111 1234568999999
Q ss_pred CCCCCEEEEEEEEeCCceEEEEEEEEEeec
Q psy12695 218 TMSDSGIYTCRAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 247 (369)
+.+|+|.|.|.|.|..|.....+.+.+...
T Consensus 91 ~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~ 120 (226)
T 4f80_A 91 TASDSGKYLCYFQDGDFYEKALVELKVAAL 120 (226)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred chHHCeeEEEEEECCCcEEEEEEEEeeccc
Confidence 999999999999999988877766665543
No 241
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.86 E-value=7.5e-09 Score=77.80 Aligned_cols=95 Identities=22% Similarity=0.229 Sum_probs=60.9
Q ss_pred CCCeeeccCCeEEEEEEeeC-CCCCeEEEEeCCeE-------eeecccc-cccCCcceEEEE--eecceeeEEEcccCCC
Q psy12695 152 TPDVTAEENENVTLSCRATG-SPVPKIKWIFKEKI-------IANISSG-LANMNKRQYIIK--TINSLSNLTIVAVTMS 220 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g-~p~p~i~W~~~~~~-------~~~~~~~-~~~~~~~~~~~~--~~~~~~~L~I~~v~~~ 220 (369)
+..+.+.+|++++|.|.+.+ .....+.|++.... +...... .......++.+. .......|.|.+++.+
T Consensus 4 ~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~ 83 (116)
T 2or8_A 4 YVEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVES 83 (116)
T ss_dssp CEEEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGG
T ss_pred cceEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcc
Confidence 45688999999999999865 34567999997521 1111000 000112233321 1234568999999999
Q ss_pred CCEEEEEEEEeCCceE--EEEEEEEEee
Q psy12695 221 DSGIYTCRAKNGAGEV--FTNISLNVIK 246 (369)
Q Consensus 221 D~G~Y~C~a~n~~g~~--~~~~~l~v~~ 246 (369)
|+|.|.|.+.+..+.. ...+.|.|..
T Consensus 84 DsG~Y~C~v~~~~~~~~~~~~~~l~V~p 111 (116)
T 2or8_A 84 DSGLYCCRVEIPGWFNDQKVTFSLQVKP 111 (116)
T ss_dssp GCEEEEEEECCSSTTCCEEEEEEEEEEC
T ss_pred cCEEEEEEEEcCCcccccEEEEEEEECC
Confidence 9999999998875443 5556666643
No 242
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.86 E-value=1.1e-08 Score=88.05 Aligned_cols=100 Identities=22% Similarity=0.313 Sum_probs=68.9
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC-----eEeeecccccccCCcceEEEEeecceeeEEEcccCCCC
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-----KIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 221 (369)
.+...+..+.+.+|+.++|.|.+.+.|.+.+.|+++. ..+.............++..........|.|.+++.+|
T Consensus 6 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 85 (250)
T 3esu_F 6 VLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQED 85 (250)
T ss_dssp CEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhh
Confidence 3455677888999999999999999999999999853 11111111111112234555555566789999999999
Q ss_pred CEEEEEEEEeCCceEE-EEEEEEEee
Q psy12695 222 SGIYTCRAKNGAGEVF-TNISLNVIK 246 (369)
Q Consensus 222 ~G~Y~C~a~n~~g~~~-~~~~l~v~~ 246 (369)
+|.|.|.+.|..+... ....|.|..
T Consensus 86 ~G~Y~C~~~n~~~~~~~~~~~l~V~~ 111 (250)
T 3esu_F 86 IGTYFCQQGNTLPWTFGGGTKLEIRR 111 (250)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred CEEEEEEEeeCCCceECCCEEEEEEC
Confidence 9999999998766532 334566654
No 243
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.86 E-value=1.7e-09 Score=88.03 Aligned_cols=97 Identities=20% Similarity=0.219 Sum_probs=80.8
Q ss_pred CceEEEecCCCCCccCCCCC--CCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCC-ccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQLD--VGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPS-HILDSILELRELKLS 119 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~~--~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~-~~f~~l~~L~~L~L~ 119 (369)
..+.++.++|.++.++ .+. ..++.|+|++|+|. +..|.++++|+.|+|++|+|+.++. ..|..+++|+.|+|+
T Consensus 43 ~L~~L~Ls~N~l~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~ 121 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCIL 121 (176)
T ss_dssp CCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECC
T ss_pred CCCEEECCCCCCCccc-ccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEEec
Confidence 3678999999999884 343 57999999999966 4668999999999999999999886 578899999999999
Q ss_pred ccceecccCC---cccccCcCcccccc
Q psy12695 120 GNPIQKITHE---AFINVPKLNLEDFA 143 (369)
Q Consensus 120 ~N~l~~~~~~---~f~~l~~l~~~~~~ 143 (369)
+|+++.++.. .|..+++|...++.
T Consensus 122 ~N~i~~~~~~~~~~~~~l~~L~~Ld~~ 148 (176)
T 1a9n_A 122 RNPVTNKKHYRLYVIYKVPQVRVLDFQ 148 (176)
T ss_dssp SSGGGGSTTHHHHHHHHCTTCSEETTE
T ss_pred CCCCCCcHhHHHHHHHHCCccceeCCC
Confidence 9999988765 57777777665543
No 244
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.86 E-value=5.1e-09 Score=87.40 Aligned_cols=86 Identities=20% Similarity=0.227 Sum_probs=64.3
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
.....+..|+.+.+.|.+.|.|.|.|.|++++..+........ ... ....+.|.|.++..+|.|.|+|.|.|
T Consensus 125 ~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~~---~~~-----~~~~s~L~i~~~~~~d~g~YtC~a~N 196 (218)
T 4frw_A 125 GPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFKH---SRS-----AAVTSEFHLVPSRSMNGQPLTCVVSH 196 (218)
T ss_dssp CSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEEC---SSS-----EEEEEEEEECCCGGGTTCEEEEEEEC
T ss_pred eeeeeeeeccccceeeeccCCcCceEEEEECCcccccCceEec---CCc-----EEEEEEEEEeeCCHHhCeEEEEEEEe
Confidence 4556778899999999999999999999999876543221100 000 11246799999999999999999999
Q ss_pred CCceEEEEEEEEEe
Q psy12695 232 GAGEVFTNISLNVI 245 (369)
Q Consensus 232 ~~g~~~~~~~l~v~ 245 (369)
..|.....+.+.|.
T Consensus 197 ~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 197 PGLLQDQRITHILH 210 (218)
T ss_dssp TTCSSCEEEEEECC
T ss_pred CCCCeEEEEEEEEE
Confidence 99987666655544
No 245
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.86 E-value=5.8e-09 Score=79.41 Aligned_cols=99 Identities=20% Similarity=0.254 Sum_probs=61.5
Q ss_pred CCCCeeeccCCeEEEEEEeeCC----CCCeEEEEeCCeE------eeecccccc-----cCCcceEEEEe--ecceeeEE
Q psy12695 151 ITPDVTAEENENVTLSCRATGS----PVPKIKWIFKEKI------IANISSGLA-----NMNKRQYIIKT--INSLSNLT 213 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~----p~p~i~W~~~~~~------~~~~~~~~~-----~~~~~~~~~~~--~~~~~~L~ 213 (369)
.+..+.+.+|++++|.|.+.+. +.+.+.|++++.. +........ ..-..++.+.. ......|.
T Consensus 5 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 84 (124)
T 1neu_A 5 TDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIV 84 (124)
T ss_dssp CCSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEE
T ss_pred cCCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEE
Confidence 3466889999999999998643 4678999985420 111111000 00122333321 23456899
Q ss_pred EcccCCCCCEEEEEEEEeCCce--EEEEEEEEEeecCC
Q psy12695 214 IVAVTMSDSGIYTCRAKNGAGE--VFTNISLNVIKVET 249 (369)
Q Consensus 214 I~~v~~~D~G~Y~C~a~n~~g~--~~~~~~l~v~~~~~ 249 (369)
|.+++.+|+|.|.|.+.+..+. ....+.|.|...++
T Consensus 85 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p~ 122 (124)
T 1neu_A 85 IHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVP 122 (124)
T ss_dssp ECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC---
T ss_pred EccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCCC
Confidence 9999999999999999987764 46778888877653
No 246
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.86 E-value=6.7e-10 Score=108.12 Aligned_cols=97 Identities=24% Similarity=0.249 Sum_probs=78.7
Q ss_pred CCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeChhhccCCcccCeeeccCCcccccCCcccccccc
Q psy12695 33 AECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILE 112 (369)
Q Consensus 33 ~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~ 112 (369)
..||..|.|... ..+.++|++++|+.+|..++.+++.|+|++|+|..-.- .+++|+.|+|++|+|+.||. .+++
T Consensus 29 ~~~~~~~~c~~~-~l~~L~ls~n~L~~lp~~l~~~L~~L~L~~N~l~~lp~-~l~~L~~L~Ls~N~l~~lp~----~l~~ 102 (622)
T 3g06_A 29 AVVQKMRACLNN-GNAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPA-LPPELRTLEVSGNQLTSLPV----LPPG 102 (622)
T ss_dssp HHHHHHHHHHHH-CCCEEECCSSCCSCCCSCCCTTCSEEEECSCCCSCCCC-CCTTCCEEEECSCCCSCCCC----CCTT
T ss_pred ccCcccccccCC-CCcEEEecCCCcCccChhhCCCCcEEEecCCCCCCCCC-cCCCCCEEEcCCCcCCcCCC----CCCC
Confidence 357777888754 35789999999999999999999999999999773222 67899999999999999887 5688
Q ss_pred cccccccccceecccCCcccccCc
Q psy12695 113 LRELKLSGNPIQKITHEAFINVPK 136 (369)
Q Consensus 113 L~~L~L~~N~l~~~~~~~f~~l~~ 136 (369)
|+.|+|++|.|+.++. .+.++..
T Consensus 103 L~~L~Ls~N~l~~l~~-~l~~L~~ 125 (622)
T 3g06_A 103 LLELSIFSNPLTHLPA-LPSGLCK 125 (622)
T ss_dssp CCEEEECSCCCCCCCC-CCTTCCE
T ss_pred CCEEECcCCcCCCCCC-CCCCcCE
Confidence 9999999998888876 4444444
No 247
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.85 E-value=2.1e-08 Score=83.74 Aligned_cols=95 Identities=15% Similarity=0.216 Sum_probs=66.3
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeC--CeEe---eecccccccCCcceEEEEeecceeeEEEcccCCCCC
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFK--EKII---ANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 222 (369)
+...+ .+.+.+|+.++|.|.+. |.+.+.|+++ +... .............++..........|.|.+++.+|+
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 80 (211)
T 3tv3_L 4 LTQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDE 80 (211)
T ss_dssp CBCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGC
T ss_pred EEeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHC
Confidence 34445 78899999999999998 8889999984 2211 111111111122345544455677899999999999
Q ss_pred EEEEEEEEeCCc--eEEEEEEEEEe
Q psy12695 223 GIYTCRAKNGAG--EVFTNISLNVI 245 (369)
Q Consensus 223 G~Y~C~a~n~~g--~~~~~~~l~v~ 245 (369)
|.|.|.+.|..| .....+.|.|.
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~~l~V~ 105 (211)
T 3tv3_L 81 AVYYCGSLVGNWDVIFGGGTKLTVL 105 (211)
T ss_dssp EEEEEEEEETTTEEEECCCEEEEEC
T ss_pred EEEEEEEecCCCceeECCCceEEEe
Confidence 999999999988 34455677776
No 248
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.85 E-value=1.3e-08 Score=85.05 Aligned_cols=95 Identities=23% Similarity=0.349 Sum_probs=65.9
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--eEe---eecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEE
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKE--KII---ANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYT 226 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 226 (369)
|..+.+.+|+.++|.|.+.|.|.+.+.|+++. ... .............++..........|.|.+++.+|+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 67889999999999999999998999999843 211 1100000001123455444455679999999999999999
Q ss_pred EEEEeCCceEEE-EEEEEEee
Q psy12695 227 CRAKNGAGEVFT-NISLNVIK 246 (369)
Q Consensus 227 C~a~n~~g~~~~-~~~l~v~~ 246 (369)
|.+.|..+.... ...|.|..
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~ 107 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKR 107 (210)
T ss_dssp EEECSSSSCEECCCEEEEECC
T ss_pred EEEEcCCCceeCCCEEEEEcC
Confidence 999998775432 34566654
No 249
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.85 E-value=1.6e-09 Score=85.49 Aligned_cols=95 Identities=26% Similarity=0.285 Sum_probs=79.1
Q ss_pred CceEEEecCCCCCccCCCC--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccC-Cccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQL--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVP-SHILDSILELRELKLS 119 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~-~~~f~~l~~L~~L~L~ 119 (369)
..+.++.+++.++.+ ..+ ...++.|+|++|+|. +..|.++++|+.|+|++|+|+.++ ...|..+++|+.|+|+
T Consensus 43 ~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~ 121 (149)
T 2je0_A 43 ELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLF 121 (149)
T ss_dssp TCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECT
T ss_pred CCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCc
Confidence 367899999999988 334 357999999999986 456778999999999999999975 3678999999999999
Q ss_pred ccceecccC---CcccccCcCcccc
Q psy12695 120 GNPIQKITH---EAFINVPKLNLED 141 (369)
Q Consensus 120 ~N~l~~~~~---~~f~~l~~l~~~~ 141 (369)
+|.++.++. ..|..+++|...+
T Consensus 122 ~N~l~~~~~~~~~~~~~l~~L~~L~ 146 (149)
T 2je0_A 122 NCEVTNLNDYRENVFKLLPQLTYLD 146 (149)
T ss_dssp TCGGGGSTTHHHHHHHHCTTCCEET
T ss_pred CCcccchHHHHHHHHHHCCCccccc
Confidence 999999887 5777777766544
No 250
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.85 E-value=1.4e-09 Score=75.75 Aligned_cols=61 Identities=18% Similarity=0.310 Sum_probs=50.0
Q ss_pred CCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEccc-CCCCCEEEEEEE
Q psy12695 151 ITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAV-TMSDSGIYTCRA 229 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v-~~~D~G~Y~C~a 229 (369)
.|....+..|++++|.|.+.|.|. |.|++++..+... ..+.|.|.++ ..+|+|.|.|.|
T Consensus 5 ~p~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~------------------~~~~L~I~~v~~~~DsG~Y~C~A 64 (82)
T 3r08_E 5 NIEYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQK------------------HDKHLVLQDFSEVEDSGYYVCYT 64 (82)
T ss_dssp CCCCEEEEETTEEEEECSSCCCSS--CEEEETTEECTTC------------------CSSCCBCCSCCTTTTCSCEEEEC
T ss_pred CCceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcCC------------------CCCEEEECccCccCcCEEEEEEE
Confidence 356677889999999999999983 9999999766421 2457999996 789999999998
Q ss_pred Ee
Q psy12695 230 KN 231 (369)
Q Consensus 230 ~n 231 (369)
.+
T Consensus 65 ~t 66 (82)
T 3r08_E 65 PA 66 (82)
T ss_dssp SS
T ss_pred cc
Confidence 65
No 251
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.85 E-value=1.3e-09 Score=90.66 Aligned_cols=98 Identities=20% Similarity=0.443 Sum_probs=67.7
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEe-eCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRA-TGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
.|.+...+....+.+|+.+.|.|.+ .|.|.|.+.|++++..+.............++. .....+.|.|.+++.+|+|
T Consensus 107 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~i~~~~~~d~G 184 (209)
T 1nbq_A 107 PPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYV--LNPTTGELVFDPLSASDTG 184 (209)
T ss_dssp CCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCC--CCTTTCCEEESSCCGGGCC
T ss_pred CCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceE--EcCCcceEEEEeccccCCe
Confidence 3444444455678999999999997 899999999999987665432211111111111 1123568999999999999
Q ss_pred EEEEEEEeCCceEEE--EEEEEE
Q psy12695 224 IYTCRAKNGAGEVFT--NISLNV 244 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~~--~~~l~v 244 (369)
.|+|.|.|..|.... .+.|.|
T Consensus 185 ~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 185 EYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp CEEEEEECSSSCCEECCCBCCEE
T ss_pred EEEEEEeCCcCcccccccEEEEE
Confidence 999999999998733 344444
No 252
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=98.84 E-value=1e-08 Score=73.55 Aligned_cols=92 Identities=14% Similarity=0.190 Sum_probs=60.1
Q ss_pred CCCeeeccCCeEEEEEEeeC-CCCCeEEEEeCCeEeeecccccccCCcceEEEE--eecceeeEEEcccCCCCCEEEEEE
Q psy12695 152 TPDVTAEENENVTLSCRATG-SPVPKIKWIFKEKIIANISSGLANMNKRQYIIK--TINSLSNLTIVAVTMSDSGIYTCR 228 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g-~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~ 228 (369)
.+..++..|+.+.|.|.+.+ .|.|.|+|.|.+......-.... ..+-... .......|.|.+|..+|+|.|.|.
T Consensus 21 ~S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~---q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCs 97 (122)
T 1xau_A 21 NSKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGP---QLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCS 97 (122)
T ss_dssp TEEEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBT---TEEEEEECSSSSCEEEEEETTCCGGGCEEEEEE
T ss_pred eccEEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccce---eeecceeccCCceeEEEEEeeEEEcCCccEEEE
Confidence 34567899999999999955 68999999997642211000000 0000000 011245899999999999999999
Q ss_pred EEeCCceEEE-EEEEEEee
Q psy12695 229 AKNGAGEVFT-NISLNVIK 246 (369)
Q Consensus 229 a~n~~g~~~~-~~~l~v~~ 246 (369)
|.|..|.... .+.+.|..
T Consensus 98 An~~~g~ieSHs~ti~V~~ 116 (122)
T 1xau_A 98 TNFNSQVINSHSVTIHVRE 116 (122)
T ss_dssp EEETTEEEECCCEEEEEC-
T ss_pred eeCCCCceeeeEEEEEEEe
Confidence 9999887543 35555554
No 253
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.84 E-value=6.9e-09 Score=83.49 Aligned_cols=75 Identities=21% Similarity=0.357 Sum_probs=59.3
Q ss_pred CCeeeccCCeEEEEEEe-eCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 153 PDVTAEENENVTLSCRA-TGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ......|.|.+++.+|+|.|+|.|.|
T Consensus 93 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~-----------------~~~~~~L~i~~v~~~d~G~Y~C~a~n 155 (170)
T 3ry4_A 93 PHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF-----------------SHLDPTFSIPQANHSHSGDYHCTGNI 155 (170)
T ss_dssp SCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE-----------------ESSCCEEEESSCCGGGCEEEEEEEEE
T ss_pred CCceeecCCeEEEEEECCCCCCCceEEEEECCeEccc-----------------cCCCCeEEEEeccccCCEEEEEEEEe
Confidence 45567899999999999 5566789999999876542 11245799999999999999999999
Q ss_pred CCce-EEEEEEEEE
Q psy12695 232 GAGE-VFTNISLNV 244 (369)
Q Consensus 232 ~~g~-~~~~~~l~v 244 (369)
..|. .+..+.|.|
T Consensus 156 ~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 156 GYTLFSSKPVTITV 169 (170)
T ss_dssp TTEEEECCCEEEEE
T ss_pred CcCccccccEEEEE
Confidence 9987 444555554
No 254
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.84 E-value=9.3e-09 Score=77.03 Aligned_cols=82 Identities=21% Similarity=0.372 Sum_probs=56.2
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--eE---eeecccccccCCcceEEEEe---ecceeeEEEcccCCCC
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--KI---IANISSGLANMNKRQYIIKT---INSLSNLTIVAVTMSD 221 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~L~I~~v~~~D 221 (369)
..|..+.+.+|++++|.|.+.+.+ +.+.|+++. .. +...... .....++.+.. ......|.|.+++.+|
T Consensus 6 q~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~--~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D 82 (113)
T 1h5b_A 6 QSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASG--TKENGRLKSAFDSERARYSTLHIRDAQLED 82 (113)
T ss_dssp EECSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSS--EEEETTEEEECCSSSSSEEEEEECSCCGGG
T ss_pred ECCCEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCC--CccCCceEEEEccCCCCEEEEEECCCChhh
Confidence 346778899999999999998765 689999854 11 1111100 01122333322 2345689999999999
Q ss_pred CEEEEEEEEeCCc
Q psy12695 222 SGIYTCRAKNGAG 234 (369)
Q Consensus 222 ~G~Y~C~a~n~~g 234 (369)
+|.|.|.+.|..|
T Consensus 83 sG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 83 SGTYFCAAEASSG 95 (113)
T ss_dssp CEEEEEEEECSSS
T ss_pred CEEEEEEEecCCC
Confidence 9999999998765
No 255
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.84 E-value=1.3e-08 Score=87.20 Aligned_cols=101 Identities=17% Similarity=0.204 Sum_probs=67.1
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEEcccCCCCC
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 222 (369)
+...|..+.+.+|++++|.|.+.+.|.+.+.|+++. . .+.............++.+........|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHC
Confidence 344567789999999999999999999999999853 1 11111100000112355554445567899999999999
Q ss_pred EEEEEEEEeCCceE-EEEEEEEEeecC
Q psy12695 223 GIYTCRAKNGAGEV-FTNISLNVIKVE 248 (369)
Q Consensus 223 G~Y~C~a~n~~g~~-~~~~~l~v~~~~ 248 (369)
|.|.|.+.|..+.. ...+.|.|...+
T Consensus 84 G~Y~C~~~n~~~~~~~~~~~L~V~~~~ 110 (242)
T 2znx_A 84 GMYFCQQSNSXPYTFGGGTKLEITGGG 110 (242)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC---
T ss_pred EEEEEeEecCCceEECCCEEEEEcCCC
Confidence 99999999876542 233566665543
No 256
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.84 E-value=1.1e-08 Score=85.52 Aligned_cols=97 Identities=20% Similarity=0.275 Sum_probs=66.7
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCe--Ee---eecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKEK--II---ANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
..|..+.+.+|+.+.|.|.+.|.|.+.|.|++++. .. .............++..........|.|.+++.+|+|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 85 (213)
T 3d9a_L 6 QSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGM 85 (213)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred eCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEE
Confidence 34677889999999999999999999999998531 11 11000000011234544444556789999999999999
Q ss_pred EEEEEEeCCceEEE-EEEEEEee
Q psy12695 225 YTCRAKNGAGEVFT-NISLNVIK 246 (369)
Q Consensus 225 Y~C~a~n~~g~~~~-~~~l~v~~ 246 (369)
|.|.+.|..|.... .+.|.|..
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~ 108 (213)
T 3d9a_L 86 YFCQQSNSWPYTFGGGTKLEIKR 108 (213)
T ss_dssp EEEEECSSSSCEECCCEEEEECC
T ss_pred EEEeeecCCcceeCCCEEEEEec
Confidence 99999998876433 34666654
No 257
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.84 E-value=5.7e-09 Score=91.83 Aligned_cols=98 Identities=20% Similarity=0.275 Sum_probs=84.1
Q ss_pred CceEEEecCCCCCccCCC-C--CCCccEEEeecceeC---hhhccCCcccCeeeccCCc-ccccCCcccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQ-L--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQ-IQFVPSHILDSILELRELKL 118 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~-~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~-l~~i~~~~f~~l~~L~~L~L 118 (369)
..+.++.++++++.+|.. + ...++.|+|++|+|. +.+|.++++|++|+|++|+ ++.+++..|..+++|+.|+|
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 357899999999988854 3 357999999999855 6789999999999999997 99998889999999999999
Q ss_pred cccceecccCCcccccCcCcccccc
Q psy12695 119 SGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 119 ~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
++|.++.+.+..|.++++|...++.
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~ 137 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQ 137 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCcCCEECHhHhhCCcCCCEEECC
Confidence 9999999988888888887665544
No 258
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.84 E-value=1.2e-08 Score=88.24 Aligned_cols=105 Identities=18% Similarity=0.274 Sum_probs=69.9
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--eEe---eecccccccCCcceEEEEeecceeeEEEcccCC
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--KII---ANISSGLANMNKRQYIIKTINSLSNLTIVAVTM 219 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 219 (369)
.|.+...+..+.+.+|++++|.|.+.+.|.+.+.|+++. ... .............++..........|.|.+++.
T Consensus 138 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 217 (256)
T 3umt_A 138 DIQLTQSPSSLSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLES 217 (256)
T ss_dssp CCCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCG
T ss_pred ccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCCh
Confidence 344555567788999999999999999999999999842 211 111111111112355555555667899999999
Q ss_pred CCCEEEEEEEEeCCceEEE-EEEEEEeecCC
Q psy12695 220 SDSGIYTCRAKNGAGEVFT-NISLNVIKVET 249 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~g~~~~-~~~l~v~~~~~ 249 (369)
+|+|.|+|.+.|..+.... ...|.|...+.
T Consensus 218 ~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~~ 248 (256)
T 3umt_A 218 EDFVDYYCLQYASSPPTFGGGTKLEIKRAAA 248 (256)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEEC----
T ss_pred hHCEEEEEEEeeCCCcEECCCEEEEEECCCc
Confidence 9999999999987655433 46677765543
No 259
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.84 E-value=2.5e-09 Score=98.53 Aligned_cols=96 Identities=24% Similarity=0.446 Sum_probs=74.1
Q ss_pred ceEEEecCCCCCccCCCC---CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQL---DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG 120 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~---~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 120 (369)
.+.++..++.++.+|..+ ...+++|+|++|+|. +.+|.++++|++|+|++|+|+.+++.+|.++++|+.|+|++
T Consensus 47 l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 126 (390)
T 3o6n_A 47 QKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 126 (390)
T ss_dssp CSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCC
Confidence 456777788888888654 256888888888854 46788888888888888888888888888888888888888
Q ss_pred cceecccCCcccccCcCccccc
Q psy12695 121 NPIQKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 121 N~l~~~~~~~f~~l~~l~~~~~ 142 (369)
|.|+.++.+.|..+++|...++
T Consensus 127 n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 127 NDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp SCCCCCCTTTTTTCTTCCEEEC
T ss_pred CccCcCCHHHhcCCCCCcEEEC
Confidence 8888888777777777655443
No 260
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.83 E-value=3.9e-08 Score=74.77 Aligned_cols=86 Identities=14% Similarity=0.254 Sum_probs=59.9
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCC--CCeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEEcccCC
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSP--VPKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTM 219 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 219 (369)
.+.. |..+.+.+|++++|.|.+.+.+ ...+.|++.. . .+.............+|..........|+|.+++.
T Consensus 3 ~v~Q-p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~ 81 (123)
T 3t0v_A 3 VLTQ-SPSVSGTPGQKVTIFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSKSGTSASLAISGLRS 81 (123)
T ss_dssp SBEE-CCCEEECTTCCEEEEEECCTTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG
T ss_pred ccCc-cCeEEEcCCCCEEEEEecCCCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEccCCEEEEEECCCCH
Confidence 3344 5688999999999999998754 3679999842 1 22221111111123456655556678999999999
Q ss_pred CCCEEEEEEEEeCC
Q psy12695 220 SDSGIYTCRAKNGA 233 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~ 233 (369)
+|+|.|.|.+.+..
T Consensus 82 ~DsG~Y~C~~~~~~ 95 (123)
T 3t0v_A 82 EDEADYYCLSWDDS 95 (123)
T ss_dssp GGCEEEEEEEEETT
T ss_pred HHCEEEEEEEEcCC
Confidence 99999999998764
No 261
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.83 E-value=2.2e-08 Score=74.41 Aligned_cols=82 Identities=16% Similarity=0.278 Sum_probs=56.3
Q ss_pred CCCeeeccCCeEEEEEE-eeCCC-CCeEEEEeCCeEe---eecccccccCCcceEEEE--eecceeeEEEcccCCCCCEE
Q psy12695 152 TPDVTAEENENVTLSCR-ATGSP-VPKIKWIFKEKII---ANISSGLANMNKRQYIIK--TINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~-~~g~p-~p~i~W~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~L~I~~v~~~D~G~ 224 (369)
|..+.+.+|++++|.|. +.+.+ .+.+.|+++.... .............++.+. .......|+|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~ 86 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEAD 86 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCEEEcCCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEE
Confidence 67788999999999999 77665 4789999976221 111111111113455554 33446789999999999999
Q ss_pred EEEEEEeCC
Q psy12695 225 YTCRAKNGA 233 (369)
Q Consensus 225 Y~C~a~n~~ 233 (369)
|.|.+.+..
T Consensus 87 Y~C~~~~~~ 95 (109)
T 1pew_A 87 YYCQSYDAR 95 (109)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEeCC
Confidence 999998854
No 262
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.83 E-value=4.6e-09 Score=88.94 Aligned_cols=89 Identities=17% Similarity=0.234 Sum_probs=58.7
Q ss_pred CCCCeeeccCCeEEEEEEeeC-CCCCeEEEEeCCeEeeecccccc-cCCcceEEEEeecceeeEEEcccCCCCCEEEEEE
Q psy12695 151 ITPDVTAEENENVTLSCRATG-SPVPKIKWIFKEKIIANISSGLA-NMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCR 228 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g-~p~p~i~W~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 228 (369)
.+....+.+|+.+.+.|.+.| .|.|.|.|+++++.......... ..... ....+.+..++.+|+|.|+|.
T Consensus 124 ~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g--------~~~v~s~l~v~~~d~G~YtC~ 195 (226)
T 4f80_A 124 LHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVG--------LYAVAASVIMRGSSGEGVSCT 195 (226)
T ss_dssp CEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEECTTS--------CEEEEEEEEECC----CEEEE
T ss_pred ccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEECCCC--------cEEEEEEEEechhcCcEEEEE
Confidence 344567789999999999988 59999999997654432111111 00111 112344556788999999999
Q ss_pred EEeCCceEEEEEEEEEeec
Q psy12695 229 AKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 229 a~n~~g~~~~~~~l~v~~~ 247 (369)
|.|..|.....+.|.|..+
T Consensus 196 a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 196 IRSSLLGLEKTASISIADP 214 (226)
T ss_dssp EEETTTTEEEEEEECCCTT
T ss_pred EEeCCCCeEEEEEEEECCC
Confidence 9999999998888887653
No 263
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.83 E-value=1.7e-09 Score=97.50 Aligned_cols=96 Identities=22% Similarity=0.288 Sum_probs=78.7
Q ss_pred ceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccccce
Q psy12695 47 KETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPI 123 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l 123 (369)
.+.++.+++.++.+|..++..++.|+|++|.|. +.+|.++++|+.|+|++|+|+.+++.+|..+++|+.|+|++|.|
T Consensus 174 L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 253 (332)
T 2ft3_A 174 LNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL 253 (332)
T ss_dssp CSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCC
T ss_pred cCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcC
Confidence 456777788888888888888999999999865 46788999999999999999999888899999999999999999
Q ss_pred ecccCCcccccCcCcccccc
Q psy12695 124 QKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 124 ~~~~~~~f~~l~~l~~~~~~ 143 (369)
+.++.. |..++.|...++.
T Consensus 254 ~~lp~~-l~~l~~L~~L~l~ 272 (332)
T 2ft3_A 254 SRVPAG-LPDLKLLQVVYLH 272 (332)
T ss_dssp CBCCTT-GGGCTTCCEEECC
T ss_pred eecChh-hhcCccCCEEECC
Confidence 988754 6677766554443
No 264
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.83 E-value=7.4e-09 Score=90.64 Aligned_cols=102 Identities=15% Similarity=0.195 Sum_probs=67.8
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCe-----EeeecccccccCCcceEEEEeecceeeEEEcccCCC
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEK-----IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMS 220 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 220 (369)
+.+...|..+.+.+|++++|.|.+.+.|.+.+.|++++. .+.............++.+........|.|.+++.+
T Consensus 13 ~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 92 (276)
T 3auv_A 13 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 92 (276)
T ss_dssp CCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChh
Confidence 344555778889999999999999999999999998642 121111111111123555544455668999999999
Q ss_pred CCEEEEEEEEeCCce-EEEEEEEEEeec
Q psy12695 221 DSGIYTCRAKNGAGE-VFTNISLNVIKV 247 (369)
Q Consensus 221 D~G~Y~C~a~n~~g~-~~~~~~l~v~~~ 247 (369)
|+|.|.|.+.|..+. ....+.|.|...
T Consensus 93 DsG~Y~C~~~n~~~~~~~~~~~l~V~~~ 120 (276)
T 3auv_A 93 DFATYYCQQHYTTPPTFGCGTKVEIKGG 120 (276)
T ss_dssp GCEEEEEEECSSSSCCCCCCEEEEC---
T ss_pred hCEEEEEEEecCCcccccCCEEEEEecC
Confidence 999999999987554 222345555543
No 265
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.83 E-value=1.8e-08 Score=85.64 Aligned_cols=100 Identities=16% Similarity=0.243 Sum_probs=68.3
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEEcccCCCC
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 221 (369)
.+...+..+.+.+|++++|.|.+.+.|.+.+.|++++ . .+.............++..........|.|.+++.+|
T Consensus 26 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 105 (237)
T 3sob_L 26 QMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPED 105 (237)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhh
Confidence 3444567789999999999999999999999999843 1 1111111111112335555555567789999999999
Q ss_pred CEEEEEEEEeCCceE-EEEEEEEEee
Q psy12695 222 SGIYTCRAKNGAGEV-FTNISLNVIK 246 (369)
Q Consensus 222 ~G~Y~C~a~n~~g~~-~~~~~l~v~~ 246 (369)
+|.|.|.+.|..+.. .....+.|..
T Consensus 106 ~G~Y~C~~~~~~~~~~~~~~~l~V~~ 131 (237)
T 3sob_L 106 FATYYCQQSYTTPPTFGQGTKVEIKR 131 (237)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEEC
T ss_pred CeEEEEeeccCCceEEcCcEEEEEec
Confidence 999999998877542 2334566644
No 266
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.83 E-value=1.2e-08 Score=82.96 Aligned_cols=91 Identities=15% Similarity=0.292 Sum_probs=64.6
Q ss_pred CeeeccCCeEEEEEEeeC--CCCCeEEEEeCCeEeeeccccc-ccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEE
Q psy12695 154 DVTAEENENVTLSCRATG--SPVPKIKWIFKEKIIANISSGL-ANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAK 230 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g--~p~p~i~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 230 (369)
.+.+.+|+.+.|.|...+ .+.+.|.|++++..+....... ......++.+ ...+.|.|.+++.+|+|.|.|.+.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~---~~~gsL~I~~v~~~D~G~Y~C~~~ 81 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEI---LANGDLKIKNLTRDDSGTYNVTVY 81 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEE---CTTSCEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEE---CCCCcEEEcccccccCEEEEEEEE
Confidence 366789999999996543 6667899999987654221111 0111233333 234569999999999999999999
Q ss_pred eCCceE--EEEEEEEEeec
Q psy12695 231 NGAGEV--FTNISLNVIKV 247 (369)
Q Consensus 231 n~~g~~--~~~~~l~v~~~ 247 (369)
|..|.. ...+.|.|...
T Consensus 82 n~~g~~~~~~~~~l~V~~~ 100 (176)
T 1hng_A 82 STNGTRILNKALDLRILEM 100 (176)
T ss_dssp ETTCCEEEEEEEEEEEECC
T ss_pred eCCCCEEEEEEEEEEEeCC
Confidence 999986 66778888764
No 267
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.82 E-value=4.3e-09 Score=87.85 Aligned_cols=83 Identities=25% Similarity=0.346 Sum_probs=64.6
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCe-EEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPK-IKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
|.+...+....+.+|+.++|.|.+.+.|.+. +.|++++..+.. ..+.|.|.+++.+|+|.
T Consensus 8 p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~-------------------~~~~L~i~~v~~~D~G~ 68 (204)
T 3sgj_C 8 AVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISS-------------------QASSYFIDAATVDDSGE 68 (204)
T ss_dssp CEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESC-------------------CSSEEEESSCCGGGCEE
T ss_pred CeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEccc-------------------CccEEEEecccccCCEE
Confidence 3444456668899999999999999998876 999999876542 12689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
|.|.+.|.. .+..+.|.|...+.
T Consensus 69 Y~C~a~n~~--~s~~~~l~V~~~p~ 91 (204)
T 3sgj_C 69 YRCQTQLST--LSDPVQLEVHIGWL 91 (204)
T ss_dssp EEEEETTSB--CCCCEEEEEECSSE
T ss_pred EEEEeCCCc--ccccEEEEEecCce
Confidence 999998853 34456677765543
No 268
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.82 E-value=4.1e-09 Score=85.35 Aligned_cols=90 Identities=19% Similarity=0.216 Sum_probs=64.2
Q ss_pred CeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeeccccccc-C--CcceEEEEeecceeeEEEcccCCCCCEEEEEEEE
Q psy12695 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLAN-M--NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAK 230 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 230 (369)
.+.+.+|++++|.|.+.+ |.+.|.|++++..+......... . -+.+.. .....+.|.|.+++.+|+|.|.|.+.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~--~~~~~~sL~I~~v~~~DsG~Y~C~~~ 80 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVY--LDTVSGSLTIYNLTSSDEDEYEMESP 80 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEE--ECTTTCCEEECSCCGGGCEEEEEECT
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEE--EeCCCCeEEECCCChhhCceEEEEEe
Confidence 467899999999999854 88899999988754432211000 0 011222 22345789999999999999999999
Q ss_pred eCCceEEEEEEEEEeecC
Q psy12695 231 NGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 231 n~~g~~~~~~~l~v~~~~ 248 (369)
|..| ...+.|.|..++
T Consensus 81 n~~~--~~~~~L~V~~~~ 96 (171)
T 1ccz_A 81 NITD--TMKFFLYVLEMV 96 (171)
T ss_dssp TCCS--CEEEEEEEECCC
T ss_pred CCCC--cEEEEEEEECcC
Confidence 9888 667788887653
No 269
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=98.81 E-value=8e-09 Score=97.11 Aligned_cols=96 Identities=22% Similarity=0.315 Sum_probs=65.9
Q ss_pred ceEEEecCCCCCccCC-CC--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPE-QL--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG 120 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~-~~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 120 (369)
.+.++.+++.+..++. .+ ...++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++..|..+++|+.|+|++
T Consensus 277 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 356 (455)
T 3v47_A 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSY 356 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCS
T ss_pred ceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCC
Confidence 4567777777775433 23 246777777777754 45677777777777777777777777777777777777777
Q ss_pred cceecccCCcccccCcCccccc
Q psy12695 121 NPIQKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 121 N~l~~~~~~~f~~l~~l~~~~~ 142 (369)
|.|+.+.+..|..+++|...++
T Consensus 357 N~l~~~~~~~~~~l~~L~~L~L 378 (455)
T 3v47_A 357 NHIRALGDQSFLGLPNLKELAL 378 (455)
T ss_dssp SCCCEECTTTTTTCTTCCEEEC
T ss_pred CcccccChhhccccccccEEEC
Confidence 7777776667776666555443
No 270
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.81 E-value=3.6e-09 Score=91.61 Aligned_cols=102 Identities=16% Similarity=0.257 Sum_probs=56.8
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--e---Eeeecc--ccc----ccCCcceEE-EEeecceeeEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--K---IIANIS--SGL----ANMNKRQYI-IKTINSLSNLT 213 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~---~~~~~~--~~~----~~~~~~~~~-~~~~~~~~~L~ 213 (369)
|.+...+..+.+.+|++++|.|.+.+.+.+.+.|++.. . .+.... ... .....+++. .........|.
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 82 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMI 82 (259)
T ss_dssp --------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEE
T ss_pred cccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEE
Confidence 44556678899999999999999999999999999832 1 111111 000 001111221 12233456799
Q ss_pred EcccCCCCCEEEEEEEEeCCc---eEEEEEEEEEeec
Q psy12695 214 IVAVTMSDSGIYTCRAKNGAG---EVFTNISLNVIKV 247 (369)
Q Consensus 214 I~~v~~~D~G~Y~C~a~n~~g---~~~~~~~l~v~~~ 247 (369)
|.+++.+|+|.|.|.+.|..+ .......|.|...
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~ 119 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDK 119 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC-
T ss_pred ECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecC
Confidence 999999999999999999876 3344466777653
No 271
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.81 E-value=1.4e-08 Score=93.60 Aligned_cols=89 Identities=29% Similarity=0.393 Sum_probs=71.5
Q ss_pred CeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCC
Q psy12695 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGA 233 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 233 (369)
...+.+|+.+.|.|.+.|.|.|.+.|++++..+.... . ......+.|.|.+++.+|+|.|+|.|.|..
T Consensus 231 ~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~--------~----~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 298 (404)
T 3p3y_A 231 SQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDK--------A----KFENFNKALRITNVSEEDSGEYFCLASNKM 298 (404)
T ss_dssp EEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTT--------E----EEEGGGTEEEESSCCGGGCEEEEEEEECSS
T ss_pred CceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCc--------c----cccccCceEEEccCCHhHCEEEEEEEEeCC
Confidence 3568899999999999999999999999987654211 1 112235689999999999999999999999
Q ss_pred ceEEEEEEEEEeecCCcccCC
Q psy12695 234 GEVFTNISLNVIKVETAVAQP 254 (369)
Q Consensus 234 g~~~~~~~l~v~~~~~~~~~~ 254 (369)
|.....+.|.|...+.....+
T Consensus 299 g~~~~~~~l~V~~~p~~~~~~ 319 (404)
T 3p3y_A 299 GSIRHTISVRVKAAPYWLDEP 319 (404)
T ss_dssp CEEEEEEEEEEEEEEEEEECC
T ss_pred CcEEEEEEEEEeCCCeeeccC
Confidence 999999999998776544433
No 272
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.81 E-value=1e-08 Score=87.51 Aligned_cols=99 Identities=18% Similarity=0.205 Sum_probs=68.1
Q ss_pred cCCCCCeeeccCCeEEEEEEeeCCC----CCeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEEcccCC
Q psy12695 149 RPITPDVTAEENENVTLSCRATGSP----VPKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTM 219 (369)
Q Consensus 149 ~~~~~~~~~~~G~~~~l~C~~~g~p----~p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 219 (369)
...|..+.+.+|+.++|.|.+.+.| .+.+.|+++. . .+.............++.+........|.|.+++.
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (240)
T 1moe_A 5 TQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEA 84 (240)
T ss_dssp EEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCCh
Confidence 3456778899999999999999998 7889999853 1 11111110011112355554445566899999999
Q ss_pred CCCEEEEEEEEeCCce-EEEEEEEEEeec
Q psy12695 220 SDSGIYTCRAKNGAGE-VFTNISLNVIKV 247 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~g~-~~~~~~l~v~~~ 247 (369)
+|+|.|.|.+.|..+. ....+.|.|...
T Consensus 85 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 113 (240)
T 1moe_A 85 DDVATYYCQQTNEDPYTFGGGTKLEIKGG 113 (240)
T ss_dssp GGCEEEEEEECSSSSCCBCCCEEEEECCC
T ss_pred hhCEEEEEEEccCCceeecCCEEEEEecC
Confidence 9999999999998654 334456777654
No 273
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.81 E-value=7.1e-09 Score=86.29 Aligned_cols=80 Identities=24% Similarity=0.392 Sum_probs=60.8
Q ss_pred eccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCCceE
Q psy12695 157 AEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEV 236 (369)
Q Consensus 157 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~ 236 (369)
+.+|+.+.|.|.+.+.| |.+.|++++..+.... ++. .....+.|.|.++..+|+|.|+|.|.|..|..
T Consensus 122 ~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~---------~~~--~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 189 (208)
T 3r4d_A 122 VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTE---------RMT--LSQNNSILRIDPIKREDAGEYQCEISNPVSVR 189 (208)
T ss_dssp CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCS---------SEE--EETTTTEEEESSCCGGGCEEEEEEEECTTCCE
T ss_pred EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCC---------CeE--EcCCCCEEEEeccCHHhCeEEEEEEecCCCcc
Confidence 88999999999999976 7999999987764211 111 22334689999999999999999999999985
Q ss_pred E-EEEEEEEeecC
Q psy12695 237 F-TNISLNVIKVE 248 (369)
Q Consensus 237 ~-~~~~l~v~~~~ 248 (369)
. ..+.|.|..++
T Consensus 190 ~s~~~~l~v~~~~ 202 (208)
T 3r4d_A 190 RSNSIKLDIIFDP 202 (208)
T ss_dssp ECCCEEECCC---
T ss_pred cCCceeeeEEeCC
Confidence 4 44777766554
No 274
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.80 E-value=3e-08 Score=75.07 Aligned_cols=95 Identities=22% Similarity=0.311 Sum_probs=62.5
Q ss_pred CCeeeccCCeEEEEEEeeCCC---CCeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 153 PDVTAEENENVTLSCRATGSP---VPKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p---~p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
..+.+.+|++++|.|.+.+.+ .+.+.|+++. . .+.............++..........|.|.+++.+|+|.
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~DsG~ 87 (120)
T 1oaq_L 8 SALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAI 87 (120)
T ss_dssp SEEEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGGGCEE
T ss_pred CcEEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeEEEEECCCChhhCeE
Confidence 348899999999999998765 5679999843 1 1211111111111345655545556789999999999999
Q ss_pred EEEEEEeCCceEE-EEEEEEEeec
Q psy12695 225 YTCRAKNGAGEVF-TNISLNVIKV 247 (369)
Q Consensus 225 Y~C~a~n~~g~~~-~~~~l~v~~~ 247 (369)
|.|.+.+..+... ....|.|...
T Consensus 88 Y~C~~~~~~~~~fg~gt~L~V~~~ 111 (120)
T 1oaq_L 88 YFCALWYSNHLVFGGGTKLTVLGQ 111 (120)
T ss_dssp EEEEEEETTEEEECCCEEEEECC-
T ss_pred EEEEEccCCCcEECCCEEEEEcCC
Confidence 9999988754322 2246666544
No 275
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.80 E-value=6.6e-09 Score=100.52 Aligned_cols=95 Identities=23% Similarity=0.255 Sum_probs=81.4
Q ss_pred CceEEEecCCCCCccCC-CC--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPE-QL--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLS 119 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~-~~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 119 (369)
..+.++.+++.++.+|. .+ ...+++|+|++|+|. +.+|.++++|++|||++|+|+.||.. .+++|+.|+|+
T Consensus 53 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~Ls 129 (562)
T 3a79_B 53 RTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC---PMASLRHLDLS 129 (562)
T ss_dssp TCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC---CCTTCSEEECC
T ss_pred CcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc---ccccCCEEECC
Confidence 35789999999998884 34 357999999999954 78899999999999999999999886 78999999999
Q ss_pred ccceeccc-CCcccccCcCcccccc
Q psy12695 120 GNPIQKIT-HEAFINVPKLNLEDFA 143 (369)
Q Consensus 120 ~N~l~~~~-~~~f~~l~~l~~~~~~ 143 (369)
+|.|+.++ +..|.++++|...++.
T Consensus 130 ~N~l~~l~~p~~~~~l~~L~~L~L~ 154 (562)
T 3a79_B 130 FNDFDVLPVCKEFGNLTKLTFLGLS 154 (562)
T ss_dssp SSCCSBCCCCGGGGGCTTCCEEEEE
T ss_pred CCCccccCchHhhcccCcccEEecC
Confidence 99999987 4788888887765544
No 276
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.80 E-value=5.4e-09 Score=87.19 Aligned_cols=101 Identities=25% Similarity=0.431 Sum_probs=69.7
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecc--eeeEEEcccCCCCC
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINS--LSNLTIVAVTMSDS 222 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~L~I~~v~~~D~ 222 (369)
+|.+...+..+.+.+|+.+.|.|.+.|.|.+.+.|++++..+....... ........... ...+.|.+++.+|+
T Consensus 9 pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~i~~~~~~d~ 84 (212)
T 2v9r_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDP----RSHRMLLPSGSLFFLRIVHGRKSRPDE 84 (212)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCT----TCSEEECTTSCEEESSCCCCSSCCCSC
T ss_pred CcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeecccccc----ccceEEecCCcEEEEEEEecCCCcccC
Confidence 3556667788999999999999999999999999999987765322110 00000000000 12355567799999
Q ss_pred EEEEEEEEeCCceE-EEEEEEEEeecCC
Q psy12695 223 GIYTCRAKNGAGEV-FTNISLNVIKVET 249 (369)
Q Consensus 223 G~Y~C~a~n~~g~~-~~~~~l~v~~~~~ 249 (369)
|.|.|.+.|..|.. ...+.+.|...+.
T Consensus 85 G~Y~C~~~n~~g~~~~~~~~l~V~~~~~ 112 (212)
T 2v9r_A 85 GVYVCVARNYLGEAVSHDASLEVAILRD 112 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECEECS
T ss_pred eEEEEEEECCCCceeecceEEEEEeccc
Confidence 99999999998875 4467777765443
No 277
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.80 E-value=9e-09 Score=85.54 Aligned_cols=103 Identities=22% Similarity=0.383 Sum_probs=71.4
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeeccc--ccc-cCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISS--GLA-NMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
.+...+..+.+.+|+.+.|.|.+.|.|.+.+.|++++..+..... ... .....++... ...|.|.+++.+|+|
T Consensus 6 ~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~----~~~L~i~~~~~~d~G 81 (209)
T 1nbq_A 6 TVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL----PTGITFKSVTREDTG 81 (209)
T ss_dssp EEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE----TTEEECSCCCTTSCS
T ss_pred EEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee----ccEEEEeeCCHHHCc
Confidence 344567788899999999999999999999999997754321100 000 0011122211 268999999999999
Q ss_pred EEEEEEEeCCc--eEEEEEEEEEeecCCcccC
Q psy12695 224 IYTCRAKNGAG--EVFTNISLNVIKVETAVAQ 253 (369)
Q Consensus 224 ~Y~C~a~n~~g--~~~~~~~l~v~~~~~~~~~ 253 (369)
.|.|.+.|..| .....+.|.|...+.....
T Consensus 82 ~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~ 113 (209)
T 1nbq_A 82 TYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTV 113 (209)
T ss_dssp EEEEEEEETTSSCEECCEEECCEEBCCCCCCC
T ss_pred EEEEEEecCCCCccceEEEEEEEecCCcCCCc
Confidence 99999999865 4456677778776654433
No 278
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.80 E-value=7.9e-09 Score=95.19 Aligned_cols=96 Identities=20% Similarity=0.232 Sum_probs=80.5
Q ss_pred ceEEEecCCCCCccCCC-C--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQ-L--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG 120 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~-~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 120 (369)
.+.++.+++.++.+|.. + ...++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++..|..+++|+.|+|++
T Consensus 71 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~ 150 (390)
T 3o6n_A 71 VELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSN 150 (390)
T ss_dssp CSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCC
Confidence 56789999999888753 3 357899999999955 56789999999999999999999998899999999999999
Q ss_pred cceecccCCcccccCcCccccc
Q psy12695 121 NPIQKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 121 N~l~~~~~~~f~~l~~l~~~~~ 142 (369)
|.++.+++..|..+++|...++
T Consensus 151 n~l~~~~~~~~~~l~~L~~L~l 172 (390)
T 3o6n_A 151 NNLERIEDDTFQATTSLQNLQL 172 (390)
T ss_dssp SCCCBCCTTTTSSCTTCCEEEC
T ss_pred CccCccChhhccCCCCCCEEEC
Confidence 9999998888888877665444
No 279
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.80 E-value=1.2e-08 Score=87.06 Aligned_cols=87 Identities=21% Similarity=0.277 Sum_probs=59.4
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCe-----EeeecccccccCCcceEEEE--eecceeeEEEcccCC
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEK-----IIANISSGLANMNKRQYIIK--TINSLSNLTIVAVTM 219 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~I~~v~~ 219 (369)
.+...+..+.+.+|+.++|.|.+.|.|.|.+.|++++. .+.............++.+. .......|.|.+++.
T Consensus 129 ~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 208 (238)
T 2p1y_A 129 QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQP 208 (238)
T ss_dssp CCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCG
T ss_pred eEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCH
Confidence 34444667789999999999999999999999999641 11111100000112233332 123356899999999
Q ss_pred CCCEEEEEEEEeCC
Q psy12695 220 SDSGIYTCRAKNGA 233 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~ 233 (369)
+|+|.|+|.|.|..
T Consensus 209 ~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 209 GDSATYFCAAIDTN 222 (238)
T ss_dssp GGCEEEEEEEEETT
T ss_pred HHCEEEEEEEeeCC
Confidence 99999999999984
No 280
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.80 E-value=1.4e-08 Score=83.90 Aligned_cols=95 Identities=20% Similarity=0.285 Sum_probs=67.9
Q ss_pred CCCCeeeccCCeEEEEEEeeC-CCCCeEEEEeCCeEeeecccccc------cCC---cceEEEEeecceeeEEEcccCCC
Q psy12695 151 ITPDVTAEENENVTLSCRATG-SPVPKIKWIFKEKIIANISSGLA------NMN---KRQYIIKTINSLSNLTIVAVTMS 220 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g-~p~p~i~W~~~~~~~~~~~~~~~------~~~---~~~~~~~~~~~~~~L~I~~v~~~ 220 (369)
.|..+.+.+|++++|.|.+.+ .+.+.|.|++++..+........ ... ..++.+. ..+.|.|.+++.+
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~---~~~sL~I~~v~~~ 80 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT---QSYSLQLSNLKME 80 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC---TTCCEEECSCCGG
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC---CCeEEEECCCCcc
Confidence 356788999999999999975 55578999998765432111000 000 0122221 3578999999999
Q ss_pred CCEEEEEEEEeCCceEEEEEEEEEeecC
Q psy12695 221 DSGIYTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 221 D~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
|+|.|.|.+.|..|.....+.|.|...+
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~L~V~~~~ 108 (193)
T 2if7_A 81 DTGSYRAQISTKTSAKLSSYTLRILRQL 108 (193)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred cCceEEEEEEecCCCeEEEEEEEEEccC
Confidence 9999999999999887778888887654
No 281
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.80 E-value=6.7e-09 Score=84.20 Aligned_cols=81 Identities=26% Similarity=0.368 Sum_probs=63.9
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCe-EEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPK-IKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
|.+...+....+.+|+.+.|.|.+.+.|.+. +.|++++..+.. ..+.|.|.+++.+|+|.
T Consensus 8 p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~-------------------~~~~L~i~~~~~~d~G~ 68 (175)
T 1fnl_A 8 AVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS-------------------QASSYFIDAATVNDSGE 68 (175)
T ss_dssp CEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES-------------------SCSEEEESSCCGGGCEE
T ss_pred CEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC-------------------CceEEEEeCCCcccCEE
Confidence 4444556677899999999999999998877 889999876642 24589999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeec
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~ 247 (369)
|.|.+.|..+. ..+.+.|...
T Consensus 69 Y~C~~~n~~~s--~~~~l~V~~~ 89 (175)
T 1fnl_A 69 YRCQTNLSTLS--DPVQLEVHIG 89 (175)
T ss_dssp EEEECSSSCCC--CCEEEEEECS
T ss_pred EEEEeeCCccc--ccEEEEEeCC
Confidence 99999986653 4456666543
No 282
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.80 E-value=1.1e-08 Score=98.15 Aligned_cols=84 Identities=18% Similarity=0.298 Sum_probs=68.6
Q ss_pred CeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCC
Q psy12695 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGA 233 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 233 (369)
.+.+.+|+.+.|.|.+.|.|.|.|.|++++..+...... ......|.|.+++.+|+|.|+|.|.|..
T Consensus 335 ~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~-------------~~~~~~L~I~~v~~~D~G~YtC~A~N~~ 401 (527)
T 3qs9_E 335 DYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKG-------------LDNGYSISKFCNHKHQPGEYIFHAENDD 401 (527)
T ss_dssp EECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCB-------------CSSSSEEEEECCCTTCCSCEEEEEEETT
T ss_pred cEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCccc-------------ccCCcEEEEecCCcccCEEEEEEEEeCC
Confidence 467889999999999999999999999999887532210 1134579999999999999999999999
Q ss_pred ceEEEEEEEEEeecCCc
Q psy12695 234 GEVFTNISLNVIKVETA 250 (369)
Q Consensus 234 g~~~~~~~l~v~~~~~~ 250 (369)
|.....+.|.|..+|..
T Consensus 402 g~~~~~~~L~V~~~P~i 418 (527)
T 3qs9_E 402 AQFTKMFTLNIRRKPQV 418 (527)
T ss_dssp EEEEEEEEEC--CCCEE
T ss_pred CcEEEEEEEEEecCCeE
Confidence 99999999999877644
No 283
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.80 E-value=1.7e-08 Score=99.16 Aligned_cols=76 Identities=24% Similarity=0.385 Sum_probs=66.2
Q ss_pred CCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEE
Q psy12695 151 ITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAK 230 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 230 (369)
.+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ...|.|.++..+|+|.|+|.|.
T Consensus 565 ~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~--------------------~~~L~i~~~~~~d~G~Y~C~a~ 624 (642)
T 1e07_A 565 SPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQH--------------------TQVLFIAKITPNNNGTYACFVS 624 (642)
T ss_pred cCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECcc--------------------CceEEECcccccCCeEEEEEEE
Confidence 45677889999999999999999999999999876531 3479999999999999999999
Q ss_pred eCCceEEEEEEEEEee
Q psy12695 231 NGAGEVFTNISLNVIK 246 (369)
Q Consensus 231 n~~g~~~~~~~l~v~~ 246 (369)
|..|.....+.|.|..
T Consensus 625 N~~G~~~~s~~l~V~v 640 (642)
T 1e07_A 625 NLATGRNNSIVKSITV 640 (642)
T ss_pred ecccCcceeEEEEEEE
Confidence 9999988888887764
No 284
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.79 E-value=8.9e-09 Score=85.38 Aligned_cols=97 Identities=15% Similarity=0.129 Sum_probs=81.3
Q ss_pred CceEEEecCCCCCccCCCC--CCCccEEEeecceeC-hhhccCCcccCeeeccCCcccccCCcccccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQL--DVGTQVLDLSDNFLD-RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~--~~~~~~L~l~~n~i~-~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~ 122 (369)
..+.+++++++++.+| .+ ..+++.|+|++|.+. ...|.++++|++|+|++|+|+...+..|..+++|+.|+|++|.
T Consensus 45 ~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~ 123 (197)
T 4ezg_A 45 SLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSA 123 (197)
T ss_dssp TCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSCCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSB
T ss_pred CccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCcchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCc
Confidence 3578999999999888 44 467999999999976 3478899999999999999998667789999999999999999
Q ss_pred eecccCCcccccCcCcccccc
Q psy12695 123 IQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 123 l~~~~~~~f~~l~~l~~~~~~ 143 (369)
++......|..+++|...++.
T Consensus 124 i~~~~~~~l~~l~~L~~L~L~ 144 (197)
T 4ezg_A 124 HDDSILTKINTLPKVNSIDLS 144 (197)
T ss_dssp CBGGGHHHHTTCSSCCEEECC
T ss_pred cCcHhHHHHhhCCCCCEEEcc
Confidence 998666778888877766554
No 285
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.79 E-value=1.5e-08 Score=75.13 Aligned_cols=92 Identities=20% Similarity=0.186 Sum_probs=59.2
Q ss_pred CeeeccCCeEEEEEEeeCCCCC---eEEEEeCCeE-------eeecccccc-cCCcceEEEEe--ecceeeEEEcccCCC
Q psy12695 154 DVTAEENENVTLSCRATGSPVP---KIKWIFKEKI-------IANISSGLA-NMNKRQYIIKT--INSLSNLTIVAVTMS 220 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p---~i~W~~~~~~-------~~~~~~~~~-~~~~~~~~~~~--~~~~~~L~I~~v~~~ 220 (369)
.+.+.+|++++|.|.+.+.+.+ .+.|+++... +........ .....++.+.. ..+...|.|.+++.+
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~ 82 (109)
T 2oyp_A 3 GYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLD 82 (109)
T ss_dssp EEEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGG
T ss_pred CEEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCCh
Confidence 4678999999999999776533 4999996521 111110000 01122333221 223468999999999
Q ss_pred CCEEEEEEEEeCCceEEEEEEEEEe
Q psy12695 221 DSGIYTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 221 D~G~Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
|+|.|.|.+.+..+.....+.|.|.
T Consensus 83 D~G~Y~C~v~~~~~~~~~~~~l~V~ 107 (109)
T 2oyp_A 83 DHGTYCCRIQFPGLMNDKKLELKLD 107 (109)
T ss_dssp GCEEEEEEECCSSTTCCEEEEEEEE
T ss_pred hCeEEEEEEEcCCcccceEEEEEEE
Confidence 9999999999887665556666654
No 286
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=98.79 E-value=8.1e-09 Score=76.70 Aligned_cols=75 Identities=17% Similarity=0.258 Sum_probs=51.8
Q ss_pred eeeccCCeEEEEEEeeCCCCC-----eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEE
Q psy12695 155 VTAEENENVTLSCRATGSPVP-----KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRA 229 (369)
Q Consensus 155 ~~~~~G~~~~l~C~~~g~p~p-----~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 229 (369)
..+.+|+.++|.|.+.+.+.. .+.|++++..+.. ......|.|.+++.+|+|.|.|.+
T Consensus 17 ~~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~-----------------~~~~~~l~i~~v~~~dsG~Y~C~~ 79 (108)
T 4hwn_A 17 AEPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQS-----------------RGLSSEFQIPTASEDHSGSYWCEA 79 (108)
T ss_dssp SSCBTTCCEEEEEEC---------CCEEEEEETTEEEEE-----------------EESCCEEEESSCCGGGCEEEEEEE
T ss_pred CcCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccC-----------------CCcccEEEeCccCcccCeEEEEEE
Confidence 357899999999999766554 4999999976541 112467999999999999999999
Q ss_pred EeCCce---EEEEEEEEEee
Q psy12695 230 KNGAGE---VFTNISLNVIK 246 (369)
Q Consensus 230 ~n~~g~---~~~~~~l~v~~ 246 (369)
.+..|. .+..+.|.|..
T Consensus 80 ~~~~~~~~~~S~~l~L~V~g 99 (108)
T 4hwn_A 80 ATEDNQVWKQSPQLEIRVQG 99 (108)
T ss_dssp ECTTSSSEEECCCEEECCBC
T ss_pred EeCCCceeccCCCEEEEEEe
Confidence 987652 23334554443
No 287
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.79 E-value=5.8e-09 Score=90.56 Aligned_cols=73 Identities=30% Similarity=0.484 Sum_probs=60.1
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..... .+.+. .++.+|+|.|+|.|.|
T Consensus 192 p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~--------------------~g~~~--~v~~~d~G~Y~C~a~N 249 (265)
T 2oz4_A 192 PGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLP--------------------IGESV--TVTRDLEGTYLCRARS 249 (265)
T ss_dssp CSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECC--------------------TTSCE--ECCGGGCEEEEEEEEE
T ss_pred CCccEEcCCCeEEEEeECccCCCCeEEEEECCcccCC--------------------CCcEE--EeehhhCeEEEEEEEC
Confidence 4567889999999999999999999999999872211 11222 3778999999999999
Q ss_pred CCceEEEEEEEEEee
Q psy12695 232 GAGEVFTNISLNVIK 246 (369)
Q Consensus 232 ~~g~~~~~~~l~v~~ 246 (369)
..|.....+.|.|..
T Consensus 250 ~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 250 TQGEVTREVTVNVLS 264 (265)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999999999998864
No 288
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.79 E-value=3.7e-08 Score=84.99 Aligned_cols=98 Identities=15% Similarity=0.267 Sum_probs=65.2
Q ss_pred CCCCeeeccCCeEEEEEEeeCC--CCCeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 151 ITPDVTAEENENVTLSCRATGS--PVPKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~--p~p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
.+..+.+.+|++++|.|.+.+. +.+.+.|+++. . .+.............++..........|.|.+++.+|+|
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 87 (256)
T 3ux9_B 8 QPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEA 87 (256)
T ss_dssp CCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred cCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCE
Confidence 3456889999999999999887 78899999853 1 111111111111223555555555678999999999999
Q ss_pred EEEEEEEeCCce---EEEEEEEEEeecC
Q psy12695 224 IYTCRAKNGAGE---VFTNISLNVIKVE 248 (369)
Q Consensus 224 ~Y~C~a~n~~g~---~~~~~~l~v~~~~ 248 (369)
.|.|.+.|..+. ....+.|.|...+
T Consensus 88 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~ 115 (256)
T 3ux9_B 88 DYYCQVRDNNENEWVFGGGTKLTVLGSG 115 (256)
T ss_dssp EEEEEEEETTTTEEEECCCEEEEEC---
T ss_pred EEEEEEEECCCCceEECCCEEEEEECCC
Confidence 999999997542 2234566666543
No 289
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.78 E-value=8.5e-09 Score=92.38 Aligned_cols=83 Identities=18% Similarity=0.281 Sum_probs=66.7
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCe-EEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEc-ccCCCCCEEEEEEE
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPK-IKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIV-AVTMSDSGIYTCRA 229 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~-~v~~~D~G~Y~C~a 229 (369)
+....+.+|+.+.|.|.+.|.|.|. +.|++++..+... .. ...+.|.|. ++..+|+|.|+|.|
T Consensus 239 ~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~-----------~~----~~~~~L~i~~~v~~~d~G~Y~C~a 303 (331)
T 3u83_A 239 FDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKG-----------VE----AQNRTLFFKGPINYSLAGTYICEA 303 (331)
T ss_dssp CCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT-----------EE----EETTEEEECSCCCGGGCEEEEEEE
T ss_pred CCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCccccc-----------ce----ecCcEEEEeCCCccccCeEEEEEE
Confidence 3455688999999999999999998 9999998765321 00 124579999 89999999999999
Q ss_pred EeCCceEEEEEEEEEeecCC
Q psy12695 230 KNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 230 ~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|..|.....+.|.|...+.
T Consensus 304 ~N~~G~~~~~~~l~V~~~~~ 323 (331)
T 3u83_A 304 TNPIGTRSGQVEVNITEAAA 323 (331)
T ss_dssp EETTEEEEEEEEECCBC---
T ss_pred EeccccceEEEEEEEeccch
Confidence 99999999999998877653
No 290
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.78 E-value=3.9e-09 Score=104.99 Aligned_cols=93 Identities=24% Similarity=0.217 Sum_probs=77.2
Q ss_pred ceEEEecCCCCCccCCCCC--CCccEEEeecceeC--hhhccCCcccCeeeccCCcccccCCcccccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQLD--VGTQVLDLSDNFLD--RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~~--~~~~~L~l~~n~i~--~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~ 122 (369)
.+.++++++.+..+|..+. ..++.|+|++|.|. +..|.+|++|+.|||++|+|+.||. .|..|.+|+.|+|++|.
T Consensus 226 L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~lp~-~~~~l~~L~~L~L~~N~ 304 (727)
T 4b8c_D 226 WHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTSLPA-ELGSCFQLKYFYFFDNM 304 (727)
T ss_dssp CCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCSSCCS-SGGGGTTCSEEECCSSC
T ss_pred CcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCCccCh-hhcCCCCCCEEECCCCC
Confidence 5689999999999987763 56899999999976 5678899999999999999998855 58889999999999999
Q ss_pred eecccCCcccccCcCcccc
Q psy12695 123 IQKITHEAFINVPKLNLED 141 (369)
Q Consensus 123 l~~~~~~~f~~l~~l~~~~ 141 (369)
|+.++.. |..+++|...+
T Consensus 305 l~~lp~~-~~~l~~L~~L~ 322 (727)
T 4b8c_D 305 VTTLPWE-FGNLCNLQFLG 322 (727)
T ss_dssp CCCCCSS-TTSCTTCCCEE
T ss_pred CCccChh-hhcCCCccEEe
Confidence 9988765 77777765443
No 291
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.78 E-value=8.3e-09 Score=97.05 Aligned_cols=112 Identities=27% Similarity=0.418 Sum_probs=93.7
Q ss_pred CcCcCCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCc
Q psy12695 29 LQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSH 105 (369)
Q Consensus 29 ~~~~~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~ 105 (369)
......||..|.|... ...++|++.+|+.+|..+|.+++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++.
T Consensus 40 ~~~~~~Cp~~C~C~~~--~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 117 (452)
T 3zyi_A 40 SAGPQNCPSVCSCSNQ--FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVG 117 (452)
T ss_dssp ----CCCCTTSEECSS--SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred cCCcCCCCCCCEECCC--CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChh
Confidence 3456799999999854 357999999999999999999999999999954 67888999999999999999998888
Q ss_pred ccccccccccccccccceecccCCcccccCcCccccc
Q psy12695 106 ILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 106 ~f~~l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~ 142 (369)
+|.++++|+.|+|++|.|+.++++.|..+++|...++
T Consensus 118 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 118 AFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred hccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 8888889999999999888888888887777655443
No 292
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.78 E-value=9.9e-09 Score=85.12 Aligned_cols=81 Identities=15% Similarity=0.229 Sum_probs=59.8
Q ss_pred eeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCCce
Q psy12695 156 TAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE 235 (369)
Q Consensus 156 ~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~ 235 (369)
.+.+|+.+.|.|.+.|.|.|.+.|++++..+... ...........+.|.++..+|+|.|+|.|.|..|.
T Consensus 114 ~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~-----------~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~ 182 (202)
T 3bp6_B 114 EVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTS-----------HIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMK 182 (202)
T ss_dssp ECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEE-----------EEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTT
T ss_pred ecCCCCeEEEEEEccccCCceEEEEeCCCCccCc-----------eeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcc
Confidence 4578999999999999999999999977543210 00001111245678889999999999999999999
Q ss_pred EEEEEEEEEeec
Q psy12695 236 VFTNISLNVIKV 247 (369)
Q Consensus 236 ~~~~~~l~v~~~ 247 (369)
....+.|.|...
T Consensus 183 ~~~~~~l~v~~~ 194 (202)
T 3bp6_B 183 ELTSAIIDPLSR 194 (202)
T ss_dssp EEEEEEECC---
T ss_pred cccEEEEEecCc
Confidence 988888877554
No 293
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.78 E-value=1.5e-08 Score=93.10 Aligned_cols=96 Identities=19% Similarity=0.302 Sum_probs=72.2
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
+....+.+|+.+.|.|.+.|.|.|.+.|++++..+....... +..........|.|.+++.+|+|.|.|.|.|
T Consensus 219 ~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~-------~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 291 (395)
T 1bih_A 219 SKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDR-------ITRHNRTSGKRLLFKTTLPEDEGVYTCEVDN 291 (395)
T ss_dssp CCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSS-------EESCSSSTTSEEEESSCCGGGCEEEEEEECC
T ss_pred CCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCcee-------EEEEecCCCceEEEccCChhhCEEEEEEEEe
Confidence 356778999999999999999999999999997765322211 1111112234799999999999999999999
Q ss_pred CCceEEE-EEEEEEeecCCcccCC
Q psy12695 232 GAGEVFT-NISLNVIKVETAVAQP 254 (369)
Q Consensus 232 ~~g~~~~-~~~l~v~~~~~~~~~~ 254 (369)
..|.... .+.|.|...|.....+
T Consensus 292 ~~g~~~~~~~~l~V~~~P~~~~~~ 315 (395)
T 1bih_A 292 GVGKPQKHSLKLTVVSAPKYEQKP 315 (395)
T ss_dssp SSSSCEEEEEEEEEEEEEEEEECC
T ss_pred CCCCceEEEEEEEEEcCCccccCC
Confidence 9998655 8888888766544333
No 294
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.77 E-value=2.6e-08 Score=82.95 Aligned_cols=100 Identities=20% Similarity=0.333 Sum_probs=69.0
Q ss_pred CCCCeeeccCCeEEEEEEeeCCC----CCeEEEEeCCe-------Eeeeccccccc-----CCcceEEEE---eecceee
Q psy12695 151 ITPDVTAEENENVTLSCRATGSP----VPKIKWIFKEK-------IIANISSGLAN-----MNKRQYIIK---TINSLSN 211 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p----~p~i~W~~~~~-------~~~~~~~~~~~-----~~~~~~~~~---~~~~~~~ 211 (369)
.+..+.+.+|+.+.|.|.+.+.+ .+.+.|++.+. .+......... .-..+.... .......
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 85 (214)
T 3jz7_A 6 PEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDAS 85 (214)
T ss_dssp CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCC
T ss_pred CCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCccc
Confidence 34567899999999999999877 46899998431 11100000000 001122221 1224578
Q ss_pred EEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCc
Q psy12695 212 LTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETA 250 (369)
Q Consensus 212 L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~ 250 (369)
|.|.+++.+|+|.|.|.+.|..|.....+.|.|...+..
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~ 124 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSG 124 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBS
T ss_pred EEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCC
Confidence 999999999999999999999999888999999877643
No 295
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.77 E-value=2.6e-08 Score=83.82 Aligned_cols=88 Identities=14% Similarity=0.213 Sum_probs=60.0
Q ss_pred CeeeccCCeEEEEEEe-eCCCCCeEEEEeCCeEeeecccccccCCcceEEEEe--ecceeeEEEcccCCCCCEEEEEEEE
Q psy12695 154 DVTAEENENVTLSCRA-TGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT--INSLSNLTIVAVTMSDSGIYTCRAK 230 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~ 230 (369)
...+.+|+.+.|.|.+ .|.|.|.+.|++++....... ....... ......|.|.+++.+|+|.|+|.|.
T Consensus 119 ~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 190 (222)
T 4i0k_A 119 NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGN--------VTTSQMANERGLFDVHSVLRVVLGANGTYSCLVR 190 (222)
T ss_dssp -----CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSE--------EEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEE
T ss_pred CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCC--------cceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEE
Confidence 3467889999999999 899999999998543322110 0000000 1112348899999999999999999
Q ss_pred eCCceEEEEEEEEEeecCC
Q psy12695 231 NGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 231 n~~g~~~~~~~l~v~~~~~ 249 (369)
|..|.....+.|.|...+.
T Consensus 191 n~~g~~~~~~~l~V~~~p~ 209 (222)
T 4i0k_A 191 NPVLQQDAHGSVTITGQPL 209 (222)
T ss_dssp ETTTTEEEEEEEECCC---
T ss_pred CCCCCCceEEEEEEeCCcc
Confidence 9999999999999987664
No 296
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.77 E-value=1.2e-08 Score=84.34 Aligned_cols=89 Identities=15% Similarity=0.143 Sum_probs=64.1
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...|. ..+.+|++++|.|.+.+.|. .+.|++++..+...... .......+.|.|.+++.+|+|.|
T Consensus 6 P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~----------~~~~~~~~~L~i~~v~~~D~G~Y 73 (196)
T 2d3v_A 6 ATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQN----------PLEPKNKARFSIPSMTEHHAGRY 73 (196)
T ss_dssp CEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEEC----------CCSSTTEEEEEESSCCGGGCEEE
T ss_pred CEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCccccc----------ccCCccccEEEeccCChhHCeEE
Confidence 44444444 47899999999999998776 99999998654321100 00122457899999999999999
Q ss_pred EEEEEeCCceE--EEEEEEEEee
Q psy12695 226 TCRAKNGAGEV--FTNISLNVIK 246 (369)
Q Consensus 226 ~C~a~n~~g~~--~~~~~l~v~~ 246 (369)
.|.+.|..|.. +..+.|.|..
T Consensus 74 ~C~a~n~~g~~~~s~~~~l~V~~ 96 (196)
T 2d3v_A 74 RCYYYSPAGWSEPSDPLELVVTG 96 (196)
T ss_dssp EEEEEETTEECBCCCCEEEEEEC
T ss_pred EEEEeCCCCcCCcCccEEEEecC
Confidence 99999988743 3456777765
No 297
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.77 E-value=9.8e-09 Score=84.03 Aligned_cols=80 Identities=20% Similarity=0.211 Sum_probs=60.8
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+. ..+.+|++++|.|.+.+ +.+.+.|++++... ....+.|.|.+++.+|+|.|
T Consensus 9 P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~-------------------~~~~~~L~i~~v~~~D~G~Y 67 (184)
T 2gi7_A 9 PSLQALPS-SLVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR-------------------YQDQAVLFIPAMKRSLAGRY 67 (184)
T ss_dssp CEEEEESC-SEEETTCCEEEEEECST-TCSEEEEEETTTCC-------------------EESSSEEEESSCCGGGCEEE
T ss_pred CeEEeCCC-ccccCCCcEEEEEeCCC-CCCEEEEEECCccc-------------------cCcccEEEECcCChhhCceE
Confidence 34444444 37899999999999988 78899999987541 11356899999999999999
Q ss_pred EEEEEeCCce--EEEEEEEEEee
Q psy12695 226 TCRAKNGAGE--VFTNISLNVIK 246 (369)
Q Consensus 226 ~C~a~n~~g~--~~~~~~l~v~~ 246 (369)
.|.+.|..|. .+..+.|.|..
T Consensus 68 ~C~a~n~~g~~~~s~~~~l~V~~ 90 (184)
T 2gi7_A 68 RCSYQNGSLWSLPSDQLELVATG 90 (184)
T ss_dssp EEEEEETTEEBCCCCCEEEEEES
T ss_pred EEEEEcCCCccCCCCCEEEEecC
Confidence 9999998764 23456676644
No 298
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.77 E-value=5e-09 Score=102.12 Aligned_cols=95 Identities=24% Similarity=0.445 Sum_probs=70.9
Q ss_pred ceEEEecCCCCCccCCCC---CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQL---DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG 120 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~---~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 120 (369)
.+.+++.++.++.+|..+ ...++.|+|++|.|. +.+|.++++|+.|+|++|.|+.+++..|.++++|+.|+|++
T Consensus 53 l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 132 (597)
T 3oja_B 53 QKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 132 (597)
T ss_dssp CSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeC
Confidence 356777777777777654 246888888888854 45788888888888888888888887788888888888888
Q ss_pred cceecccCCcccccCcCcccc
Q psy12695 121 NPIQKITHEAFINVPKLNLED 141 (369)
Q Consensus 121 N~l~~~~~~~f~~l~~l~~~~ 141 (369)
|.|+.+++..|.++++|...+
T Consensus 133 n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 133 NDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp SCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCCCHHHhccCCCCCEEE
Confidence 888888777777776655443
No 299
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.77 E-value=3e-08 Score=75.46 Aligned_cols=97 Identities=18% Similarity=0.221 Sum_probs=61.3
Q ss_pred CCCCeeeccCCeEEEEEEeeCCCCC---eEEEEeCCeE-----eeeccc-cccc---CCcceEEEE---eecceeeEEEc
Q psy12695 151 ITPDVTAEENENVTLSCRATGSPVP---KIKWIFKEKI-----IANISS-GLAN---MNKRQYIIK---TINSLSNLTIV 215 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p~p---~i~W~~~~~~-----~~~~~~-~~~~---~~~~~~~~~---~~~~~~~L~I~ 215 (369)
.|..+++.+|++++|.|.+.+.+.. .|.|++.... +..... .... .-..|+.+. .......|.|.
T Consensus 6 ~p~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~ 85 (123)
T 4gjt_B 6 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 85 (123)
T ss_dssp CCSEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEE
T ss_pred cCCEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEEC
Confidence 3567889999999999999776543 4789985421 110000 0000 001122211 12234679999
Q ss_pred ccCCCCCEEEEEEEEe-CCceEEEEEEEEEeec
Q psy12695 216 AVTMSDSGIYTCRAKN-GAGEVFTNISLNVIKV 247 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n-~~g~~~~~~~l~v~~~ 247 (369)
+++.+|+|.|.|.+.+ ..|.....+.|.|...
T Consensus 86 ~v~~~DsG~Y~C~v~t~~~g~~~~~~~L~VlE~ 118 (123)
T 4gjt_B 86 NAVQADEGEYECRVSTFPAGSFQARLRLRVLEH 118 (123)
T ss_dssp SCCSSSCSEEEEEEEESSSCEEEEEEEEEC---
T ss_pred CCChHHCEEEEEEEEECCCCeEEeEEEEEEEEC
Confidence 9999999999999876 5778888888888753
No 300
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.77 E-value=1.2e-08 Score=88.27 Aligned_cols=99 Identities=16% Similarity=0.167 Sum_probs=65.4
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEe--CCeEe---eecccccccCCcceEEEEeecceeeEEEcccCCCCC
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIF--KEKII---ANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 222 (369)
+...+..+.+.+|+.++|.|.+.+.|.+.+.|++ ++..+ .............++..........|.|.+++.+|+
T Consensus 142 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 221 (257)
T 1f3r_B 142 LTQSPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDV 221 (257)
T ss_dssp SCEETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGC
T ss_pred EEccCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhC
Confidence 3344567788999999999999999989999999 44322 111110001112345444444567899999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEEee
Q psy12695 223 GIYTCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 223 G~Y~C~a~n~~g~~~~~~~l~v~~ 246 (369)
|.|+|.|.|..........|.|..
T Consensus 222 G~Y~C~a~n~~~~~g~gt~l~V~~ 245 (257)
T 1f3r_B 222 ATYFCYQYNNGYTFGAGTKLELKA 245 (257)
T ss_dssp SEEEEEEESSSEEECCCCEECCSS
T ss_pred EEEEEEEeCCCCeECCCEEEEEeC
Confidence 999999999751122234555544
No 301
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.77 E-value=1.9e-08 Score=74.88 Aligned_cols=90 Identities=19% Similarity=0.196 Sum_probs=60.2
Q ss_pred CeeeccCCeEEEEEEeeCCCCCeEEEEeCCeE-----eeeccccc--cc---CCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKI-----IANISSGL--AN---MNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~-----~~~~~~~~--~~---~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
...+.+|+++.|.|.....+.+.+.|++.... +....... .. .-..|..+ ..+++|.|.+++.+|+|
T Consensus 9 p~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~---~~ngSL~I~nvt~~D~G 85 (111)
T 2qsq_A 9 PFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREII---YPNASLLIQNIIQNDAG 85 (111)
T ss_dssp SSEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEE---CTTSCEEECSCCGGGCE
T ss_pred cceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEE---ecCCcEEEccCcccCCe
Confidence 35689999999999864444457999986532 11111000 00 01122222 24679999999999999
Q ss_pred EEEEEEEeCCc-eEEEEEEEEEee
Q psy12695 224 IYTCRAKNGAG-EVFTNISLNVIK 246 (369)
Q Consensus 224 ~Y~C~a~n~~g-~~~~~~~l~v~~ 246 (369)
.|+|.+.+..+ .....+.|.|..
T Consensus 86 ~Ytc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 86 FYTLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp EEEEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEEEEEeCCCcEEEEEEEEEEec
Confidence 99999999876 467788888864
No 302
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=98.77 E-value=1.7e-08 Score=74.46 Aligned_cols=74 Identities=14% Similarity=0.296 Sum_probs=53.7
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...|.. .+.+|++|+|.|.+.+.+ ..+.|++++....... .........|.|.+++.+|+|.|
T Consensus 6 P~i~~~p~~-~v~~G~~VtL~C~~~~~~-~~~~w~k~g~~~~~~~------------~~~~~~~~~l~I~~v~~~dsG~Y 71 (105)
T 2vsd_A 6 PSLSLHPSQ-GVSLGDTVTLRCHLPRMA-AWVQLWLNGTLRFDKE------------KDKEQDAAEFSFAVTNLEDAGTY 71 (105)
T ss_dssp CEEEEESCS-SCCTTCEEEEEEECCSSC-EEEEEEETTEEEEEEE------------ECTTCSEEEEEEECCSGGGCEEE
T ss_pred CEEEeCCCC-CcCcCCCEEEEEEcCCCC-cEEEEEECCccceeee------------ccCCCCEEEEEECCCCHHHCeEE
Confidence 344444444 689999999999997753 5789999987543210 01122356899999999999999
Q ss_pred EEEEEeCC
Q psy12695 226 TCRAKNGA 233 (369)
Q Consensus 226 ~C~a~n~~ 233 (369)
.|.+.|..
T Consensus 72 ~C~~~n~~ 79 (105)
T 2vsd_A 72 QCRYQVSE 79 (105)
T ss_dssp EEEEEEET
T ss_pred EEEEEcCC
Confidence 99998854
No 303
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.77 E-value=1.4e-08 Score=75.67 Aligned_cols=81 Identities=16% Similarity=0.238 Sum_probs=54.8
Q ss_pred CCCeeeccCCeEEEEEEeeCCC-CCeEEEEeCCeE-----eeecccccccCCcceEEEEe--ecceeeEEEcccCCCCCE
Q psy12695 152 TPDVTAEENENVTLSCRATGSP-VPKIKWIFKEKI-----IANISSGLANMNKRQYIIKT--INSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p-~p~i~W~~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~~D~G 223 (369)
|..+.+.+|++++|.|.+.+.. .+.+.|+++... +........ ....++.+.. ......|+|.+++.+|+|
T Consensus 3 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~-~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG 81 (110)
T 2q87_A 3 ARTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAG-KRNGRVSIRDSPANLSFTVTLENLTEEDAG 81 (110)
T ss_dssp EEEEEECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTC-SEETTEEEEEEGGGTEEEEEESSCCGGGCE
T ss_pred CcEEEEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccc-cccCCEEEEEcCcCCEEEEEEccCCHHHCE
Confidence 3467899999999999997643 368999986421 111111000 1223444432 234568999999999999
Q ss_pred EEEEEEEeCC
Q psy12695 224 IYTCRAKNGA 233 (369)
Q Consensus 224 ~Y~C~a~n~~ 233 (369)
.|.|.+.+..
T Consensus 82 ~Y~C~~~~~~ 91 (110)
T 2q87_A 82 TYWCGVDTPW 91 (110)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEecCc
Confidence 9999999875
No 304
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.77 E-value=7.6e-09 Score=88.69 Aligned_cols=89 Identities=18% Similarity=0.309 Sum_probs=60.7
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccc---------------cCCcceEEEEeecceeeEEEcc
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLA---------------NMNKRQYIIKTINSLSNLTIVA 216 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~L~I~~ 216 (369)
+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+........ ..-..+. .....+.|.|.+
T Consensus 143 ~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~L~i~~ 219 (250)
T 2fbo_J 143 AEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRA---SFSGARNLVIRA 219 (250)
T ss_dssp CSEEECCTTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSE---EEETTTEEEECS
T ss_pred CceEEecCCCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEeccc---ccCCccEEEEec
Confidence 3456778899999999999999999999998765532110000 0000000 011236899999
Q ss_pred cCCCCCEEEEEEEEe---CCceEEEEEEEE
Q psy12695 217 VTMSDSGIYTCRAKN---GAGEVFTNISLN 243 (369)
Q Consensus 217 v~~~D~G~Y~C~a~n---~~g~~~~~~~l~ 243 (369)
++.+|+|.|+|.|.| ..|.....+.|.
T Consensus 220 v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l~ 249 (250)
T 2fbo_J 220 AKITDAGRVWCELATGQGELDADRSSTILK 249 (250)
T ss_dssp CCGGGCEEEEEEEESSSSGGGEEEEEEEEE
T ss_pred CCcccCEEEEEEecCCccccCccceeEEEe
Confidence 999999999999999 445556555554
No 305
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.77 E-value=2.5e-08 Score=85.60 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=66.2
Q ss_pred cCCCCCeeeccCCeEEEEEEeeCCC-----CCeEEEEeCC--eE---eeecccccccCCcceEEEEeecceeeEEEcccC
Q psy12695 149 RPITPDVTAEENENVTLSCRATGSP-----VPKIKWIFKE--KI---IANISSGLANMNKRQYIIKTINSLSNLTIVAVT 218 (369)
Q Consensus 149 ~~~~~~~~~~~G~~~~l~C~~~g~p-----~p~i~W~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 218 (369)
...|..+.+.+|+.++|.|.+.+.| .+.+.|+++. .. +.............++.+........|.|.+++
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 84 (247)
T 1svz_A 5 TQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVE 84 (247)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred EecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCC
Confidence 3456778999999999999999988 6889999843 11 111111000011235555444556789999999
Q ss_pred CCCCEEEEEEEEeCCceE-EEEEEEEEeec
Q psy12695 219 MSDSGIYTCRAKNGAGEV-FTNISLNVIKV 247 (369)
Q Consensus 219 ~~D~G~Y~C~a~n~~g~~-~~~~~l~v~~~ 247 (369)
.+|+|.|.|.+.|..+.. ...+.|.|...
T Consensus 85 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 114 (247)
T 1svz_A 85 AEDLGIYYCFQGSHFPPTFGGGTKLEIKGG 114 (247)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEC--
T ss_pred HHHCEEEEEEEccCCccEECCCEEEEEECC
Confidence 999999999999886542 23356666553
No 306
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.77 E-value=6.1e-08 Score=81.43 Aligned_cols=99 Identities=18% Similarity=0.281 Sum_probs=67.5
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCC-----CeEEEEeCCeEeeecccccc------cCCcceEEEEe---ecceeeEEEc
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPV-----PKIKWIFKEKIIANISSGLA------NMNKRQYIIKT---INSLSNLTIV 215 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~-----p~i~W~~~~~~~~~~~~~~~------~~~~~~~~~~~---~~~~~~L~I~ 215 (369)
..+..+.+.+|+.+.|.|.+.+.|. +.+.|++++..+........ ..-..+..+.. ..+...|.|.
T Consensus 6 ~p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 85 (222)
T 3sbw_C 6 VPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQIT 85 (222)
T ss_dssp CSCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEES
T ss_pred cCCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEc
Confidence 3456678999999999999988774 38999998744332211100 00011222211 1234689999
Q ss_pred ccCCCCCEEEEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 216 AVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
+++.+|+|.|.|.+.| .|.....+.|.|..++.
T Consensus 86 ~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~ 118 (222)
T 3sbw_C 86 DVKLQDAGVYRCMISY-GGADYKRITVKVNAPYN 118 (222)
T ss_dssp SCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCC
T ss_pred CcccccCeEEEEEEEe-CCCceeEEEEEEECCCC
Confidence 9999999999999999 67777788888886543
No 307
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.77 E-value=9.8e-09 Score=96.19 Aligned_cols=71 Identities=30% Similarity=0.439 Sum_probs=42.1
Q ss_pred CccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccccceecccCCcccccCcC
Q psy12695 67 GTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137 (369)
Q Consensus 67 ~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~f~~l~~l 137 (369)
.++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+++.+|.++++|+.|+|++|+|+.++...|..+++|
T Consensus 208 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 208 KLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp SCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTC
T ss_pred ccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCC
Confidence 4555555555533 4556666666666666666666666666666666666666666666666555555543
No 308
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.76 E-value=3.3e-08 Score=84.76 Aligned_cols=98 Identities=19% Similarity=0.238 Sum_probs=65.7
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEe--CCeEee---ecccccccCCcceEEEEeecceeeEEEcccCCCCC
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIF--KEKIIA---NISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 222 (369)
+...+..+.+.+|+.++|.|.+.+.|.+.+.|++ ++..+. ............++..........|.|.+++.+|+
T Consensus 138 ~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 217 (247)
T 2ghw_B 138 LTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDF 217 (247)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGC
T ss_pred EEccCCEEEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHC
Confidence 4444567789999999999999999999999999 443221 11100001112344443344566899999999999
Q ss_pred EEEEEEEEeCCceEE-EEEEEEEe
Q psy12695 223 GIYTCRAKNGAGEVF-TNISLNVI 245 (369)
Q Consensus 223 G~Y~C~a~n~~g~~~-~~~~l~v~ 245 (369)
|.|.|.|.|..+... ....|.|.
T Consensus 218 G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 218 AVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEEEccCCCceEcCCEEEEEC
Confidence 999999998654433 33456664
No 309
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.76 E-value=1.7e-08 Score=93.01 Aligned_cols=92 Identities=30% Similarity=0.478 Sum_probs=72.8
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
+....+.+|+.+.|.|.+.|.|.+.+.|++++..+.... .++.. ...+.|.|.+++.+|+|.|+|.|.|
T Consensus 228 ~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~--------~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n 296 (403)
T 3laf_A 228 PSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRS--------KKYSL---LGGSNLLISNVTDDDSGTYTCVVTY 296 (403)
T ss_dssp CCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSS--------SSEEE---ETTTEEEECSCCGGGCEEEEEEEEE
T ss_pred CCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCC--------ceEEE---CCccEEEEeCCCHHHCEEEEEEEEc
Confidence 456778899999999999999999999999987664211 11111 1345799999999999999999999
Q ss_pred CCceEEEEEEEEEeecCCcccCC
Q psy12695 232 GAGEVFTNISLNVIKVETAVAQP 254 (369)
Q Consensus 232 ~~g~~~~~~~l~v~~~~~~~~~~ 254 (369)
..|.....+.|.|..++.....+
T Consensus 297 ~~g~~~~~~~l~V~~~p~~~~~~ 319 (403)
T 3laf_A 297 KNENISASAELTVLVPPWFLNHP 319 (403)
T ss_dssp TTEEEEEEEEEEEEEEEEEEECC
T ss_pred CCCceEEEEEEEEECCCcEeecC
Confidence 99999999999998766544333
No 310
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.76 E-value=1.6e-07 Score=71.50 Aligned_cols=99 Identities=14% Similarity=0.176 Sum_probs=66.0
Q ss_pred CCCCeeeccCCeEEEEEEeeCCCC-CeEEEEeCCe-----EeeecccccccCCcceEEEEe--ecceeeEEEcccCCCCC
Q psy12695 151 ITPDVTAEENENVTLSCRATGSPV-PKIKWIFKEK-----IIANISSGLANMNKRQYIIKT--INSLSNLTIVAVTMSDS 222 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p~-p~i~W~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~~D~ 222 (369)
.|..+.+.+|++++|.|.+.+... ..+.|+++.. .+.............++.+.. ......|+|.+++.+|+
T Consensus 8 ~p~~v~~~~G~svtL~C~~s~~~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Ds 87 (124)
T 2nms_A 8 GPTTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDA 87 (124)
T ss_dssp CCSEEEEETTCCEEEEEEECTTCTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred cccEEEEeCCCCEEEEeEEeCCcccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCCHHHC
Confidence 356678899999999999976543 3599998642 121111111111223454432 23456899999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 223 GIYTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 223 G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
|.|.|.+..........+.|.|...+.
T Consensus 88 g~Y~C~~~~~~~~~~~~v~L~V~~~~~ 114 (124)
T 2nms_A 88 DTYWCGIEKTGNDLGVTVQVTIDPAPV 114 (124)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECCC-
T ss_pred EEEEEEEEcCCCCccEEEEEEEeCCCc
Confidence 999999988765566678888876654
No 311
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.76 E-value=1.1e-08 Score=99.97 Aligned_cols=96 Identities=16% Similarity=0.123 Sum_probs=76.1
Q ss_pred CceEEEecCCCCCccCC-CC--CCCccEEEeeccee---ChhhccCCcccCeeeccCCcccccCCccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPE-QL--DVGTQVLDLSDNFL---DRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLS 119 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~-~~--~~~~~~L~l~~n~i---~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 119 (369)
..+.++.+++.++.++. .+ -..+++|+|++|+| .+.+|.++++|++|+|++|+|+.+++.+|.++++|+.|+|+
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAV 112 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECT
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEcc
Confidence 35678899999988776 33 24688899998884 46788888889999999888888888888888888888888
Q ss_pred ccceecccCCcccccCcCcccc
Q psy12695 120 GNPIQKITHEAFINVPKLNLED 141 (369)
Q Consensus 120 ~N~l~~~~~~~f~~l~~l~~~~ 141 (369)
+|.++.+++..|.++.+|...+
T Consensus 113 ~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 113 ETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp TSCCCCSSSSCCTTCTTCCEEE
T ss_pred CCccccccccccCCCCCCCEEe
Confidence 8888888877777777655433
No 312
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.76 E-value=1.4e-08 Score=97.92 Aligned_cols=94 Identities=21% Similarity=0.235 Sum_probs=79.5
Q ss_pred CceEEEecCCCCCccCCCCCCCccEEEeecceeChhhccCCcccCeeeccCCcccccCCcccccccccccccccccceec
Q psy12695 46 GKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~ 125 (369)
..+.+++++|+++.+|..+|..++.|+|++|+|... +.++++|++|+|++|+|+.||.. ..+++|+.|+|++|+|+.
T Consensus 411 ~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~-~~~l~~L~~L~Ls~N~l~~ip~~--~~l~~L~~L~Ls~N~l~~ 487 (549)
T 2z81_A 411 KMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSF-SLFLPRLQELYISRNKLKTLPDA--SLFPVLLVMKISRNQLKS 487 (549)
T ss_dssp TCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCC-CCCCTTCCEEECCSSCCSSCCCG--GGCTTCCEEECCSSCCCC
T ss_pred cccEEECCCCCcccccchhcCCceEEECCCCChhhh-cccCChhcEEECCCCccCcCCCc--ccCccCCEEecCCCccCC
Confidence 457788888888888888888899999999998753 46899999999999999999874 468899999999999999
Q ss_pred ccCCcccccCcCccccc
Q psy12695 126 ITHEAFINVPKLNLEDF 142 (369)
Q Consensus 126 ~~~~~f~~l~~l~~~~~ 142 (369)
+++..|..+++|...++
T Consensus 488 ~~~~~~~~l~~L~~L~l 504 (549)
T 2z81_A 488 VPDGIFDRLTSLQKIWL 504 (549)
T ss_dssp CCTTGGGGCTTCCEEEC
T ss_pred cCHHHHhcCcccCEEEe
Confidence 99988988887655443
No 313
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=98.76 E-value=2.8e-08 Score=96.35 Aligned_cols=109 Identities=15% Similarity=0.181 Sum_probs=75.4
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCC---eEEEEeCCeE-----eeecccccccCCcceEEEEe--ecceeeEEEcccCC
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVP---KIKWIFKEKI-----IANISSGLANMNKRQYIIKT--INSLSNLTIVAVTM 219 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p---~i~W~~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~ 219 (369)
..|.++.+.+|+.++|.|.+.+.|.+ .+.|++++.. +.............++.+.. ..+...|.|.+++.
T Consensus 5 ~~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~ 84 (585)
T 2ocw_A 5 FGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQ 84 (585)
T ss_pred cCcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCc
Confidence 34677899999999999999988754 7999998752 21111000000112333322 23345799999999
Q ss_pred CCCEEEEEEEEeCCceEEEEEEEEEeecCCcccCCCCce
Q psy12695 220 SDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVY 258 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~ 258 (369)
+|+|.|.|.+.|..|..+..+.|.|...+.....+....
T Consensus 85 ~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~ 123 (585)
T 2ocw_A 85 DDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYT 123 (585)
T ss_pred ccCEEEEEEcccCCCCceEEEEEEEecCccccCCCccEE
Confidence 999999999999998888889999988776544443333
No 314
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.76 E-value=2.4e-08 Score=74.54 Aligned_cols=77 Identities=19% Similarity=0.297 Sum_probs=54.5
Q ss_pred CCCCCeeeccCCeEEEEEEeeCC--CCCeEEEEeCC--eEeeecccccccCCcceEEEEe--ecceeeEEEcccCCCCCE
Q psy12695 150 PITPDVTAEENENVTLSCRATGS--PVPKIKWIFKE--KIIANISSGLANMNKRQYIIKT--INSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~--p~p~i~W~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~~D~G 223 (369)
..|..+.+.+|++++|.|.+.+. +.+.+.|+++. ...... .....++.... ......|.|.+++.+|+|
T Consensus 5 q~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~-----~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG 79 (111)
T 2ywz_A 5 QTPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKT-----ISIGGRYDETVDKGSKSFSLRISDLRVEDSG 79 (111)
T ss_dssp EECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEE-----CCSBTTEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred ECCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEe-----eEeCCCEEEEEeCCCCEEEEEECCCChhcCE
Confidence 34677889999999999999876 56789999852 111000 00122343322 234678999999999999
Q ss_pred EEEEEEEe
Q psy12695 224 IYTCRAKN 231 (369)
Q Consensus 224 ~Y~C~a~n 231 (369)
.|.|.+.|
T Consensus 80 ~Y~C~~~~ 87 (111)
T 2ywz_A 80 TYKCQADY 87 (111)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEc
Confidence 99999998
No 315
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.76 E-value=1.1e-08 Score=99.58 Aligned_cols=97 Identities=20% Similarity=0.231 Sum_probs=81.4
Q ss_pred CceEEEecCCCCCccCC-CC--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPE-QL--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLS 119 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~-~~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 119 (369)
..+.++.+++.++.+|. .+ ...++.|+|++|.|. +..|.++++|+.|+|++|.|+.+++..|..+++|+.|+|+
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls 155 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 155 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEee
Confidence 35689999999998775 33 357899999999954 6678999999999999999999999889999999999999
Q ss_pred ccceecccCCcccccCcCccccc
Q psy12695 120 GNPIQKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 120 ~N~l~~~~~~~f~~l~~l~~~~~ 142 (369)
+|.|+.+++..|..+++|...++
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~L 178 (597)
T 3oja_B 156 NNNLERIEDDTFQATTSLQNLQL 178 (597)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCcCCCCChhhhhcCCcCcEEEC
Confidence 99999999888888887665443
No 316
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.75 E-value=2.2e-08 Score=74.48 Aligned_cols=92 Identities=26% Similarity=0.344 Sum_probs=61.7
Q ss_pred CCCeeeccCCeEEEEEEe-eCCCCCeEEEEeCCeE-eeecc--ccc--c-cCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 152 TPDVTAEENENVTLSCRA-TGSPVPKIKWIFKEKI-IANIS--SGL--A-NMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~-~g~p~p~i~W~~~~~~-~~~~~--~~~--~-~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
+..+.+.+|++++|.|.+ .+.+.+.+.|++..+. +.... ... . ..-..++.+. .....|.|.+++.+|+|.
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~--~~~~sL~I~~v~~~DsG~ 87 (110)
T 2ptt_A 10 IPDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLE--ENNGALHISNVRKEDKGT 87 (110)
T ss_dssp CCSEEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEEC--TTTCCEEESSCCGGGCEE
T ss_pred CCCEEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEe--CCCccEEECCCCcccCeE
Confidence 356889999999999998 6777789999994322 22110 000 0 0011244332 256789999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEee
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~ 246 (369)
|.|.+.+.. .....+.|.|..
T Consensus 88 Y~C~v~~~~-~~~~~~~L~V~d 108 (110)
T 2ptt_A 88 YYMRVLRET-ENELKITLEVFD 108 (110)
T ss_dssp EEEEEESSS-BCCEEEEEEEEC
T ss_pred EEEEEEcCC-CcEEEEEEEEEc
Confidence 999998765 334467777764
No 317
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.75 E-value=1.6e-08 Score=87.16 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=68.9
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCC----eEEEEeCC--eE---eeecccccccCCcceEEEEeecceeeEEEcc
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVP----KIKWIFKE--KI---IANISSGLANMNKRQYIIKTINSLSNLTIVA 216 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p----~i~W~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~ 216 (369)
|.+...+..+.+.+|++++|.|.+.+.+.+ .+.|+++. .. +.............++..........|.|.+
T Consensus 134 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 213 (253)
T 3uzq_A 134 LVMTQTPASLAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINP 213 (253)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred ceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECC
Confidence 344445667889999999999999998887 89999842 21 1111111111112345555555667899999
Q ss_pred cCCCCCEEEEEEEEeCCceEEE-EEEEEEeecC
Q psy12695 217 VTMSDSGIYTCRAKNGAGEVFT-NISLNVIKVE 248 (369)
Q Consensus 217 v~~~D~G~Y~C~a~n~~g~~~~-~~~l~v~~~~ 248 (369)
++.+|+|.|.|.+.|..+.... ...|.|...+
T Consensus 214 v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~~ 246 (253)
T 3uzq_A 214 VEADDVATYFCQRSNEVPWTFGGGTKLEIKRPL 246 (253)
T ss_dssp CCGGGCEEEEEEECSSSSCCBCCCEEEEECCC-
T ss_pred CCHHHCEEEEEEEccCCCcEECCCEEEEEcCCC
Confidence 9999999999999987655433 3556665544
No 318
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.75 E-value=9.6e-09 Score=99.14 Aligned_cols=84 Identities=26% Similarity=0.202 Sum_probs=75.2
Q ss_pred CceEEEecCCCCCccCCCCC--CCccEEEeecceeCh-hhccCCcccCeeeccCCcccccC-Cccccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQLD--VGTQVLDLSDNFLDR-YTFRKLINLVELDLSYNQIQFVP-SHILDSILELRELKLSGN 121 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~~--~~~~~L~l~~n~i~~-~~f~~l~~L~~L~Ls~N~l~~i~-~~~f~~l~~L~~L~L~~N 121 (369)
..+.++.++|.|+.+|..+. ..++.|+|++|+|.. ..|.++++|+.|+|++|+|+.++ +..|..+++|+.|+|++|
T Consensus 464 ~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N 543 (567)
T 1dce_A 464 LVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGN 543 (567)
T ss_dssp TCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTS
T ss_pred cCcEeecCcccccccchhhhcCCCCCEEECCCCCCCCCcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCC
Confidence 46789999999999998774 679999999999762 27999999999999999999997 778999999999999999
Q ss_pred ceecccCC
Q psy12695 122 PIQKITHE 129 (369)
Q Consensus 122 ~l~~~~~~ 129 (369)
+|+.+++.
T Consensus 544 ~l~~~~~~ 551 (567)
T 1dce_A 544 SLCQEEGI 551 (567)
T ss_dssp GGGGSSSC
T ss_pred cCCCCccH
Confidence 99998764
No 319
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=98.75 E-value=1.7e-08 Score=90.02 Aligned_cols=97 Identities=21% Similarity=0.174 Sum_probs=80.7
Q ss_pred ceEEEecCCCCC---ccCCCCC--CCccEEEeec-ceeC---hhhccCCcccCeeeccCCcccccCCccccccccccccc
Q psy12695 47 KETVLCKAKNFT---TIPEQLD--VGTQVLDLSD-NFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELK 117 (369)
Q Consensus 47 ~~~~~c~~~~l~---~ip~~~~--~~~~~L~l~~-n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 117 (369)
.+.++.++++++ .+|..+. ..+++|+|++ |++. +.+|.++++|++|+|++|+|+...+..|..+++|+.|+
T Consensus 52 l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 131 (313)
T 1ogq_A 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEE
T ss_pred EEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEe
Confidence 456888888887 5787663 5799999995 7754 67899999999999999999976677899999999999
Q ss_pred ccccceecccCCcccccCcCcccccc
Q psy12695 118 LSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 118 L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
|++|.|+...+..|..+++|...++.
T Consensus 132 Ls~N~l~~~~p~~~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 132 FSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CCCCccCCcCChHHhcCCCCCeEECc
Confidence 99999997777788888887765554
No 320
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.75 E-value=1.3e-08 Score=100.70 Aligned_cols=97 Identities=22% Similarity=0.315 Sum_probs=79.0
Q ss_pred ceEEEecCCCCCccCCCC---CCCccEEEeecceeChh-----------hccCCcccCeeeccCCcccccCCcccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQL---DVGTQVLDLSDNFLDRY-----------TFRKLINLVELDLSYNQIQFVPSHILDSILE 112 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~---~~~~~~L~l~~n~i~~~-----------~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~ 112 (369)
.+.+++++|+++.+|... ...++.|+|++|+|..- .|.++++|+.|+|++|+|+.|++.+|.++++
T Consensus 482 L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 561 (680)
T 1ziw_A 482 LTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFE 561 (680)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred CCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccC
Confidence 567888888888887653 24688899999986531 3788899999999999999999888999999
Q ss_pred cccccccccceecccCCcccccCcCcccccc
Q psy12695 113 LRELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 113 L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
|+.|+|++|.|+.++++.|.+++.|...++.
T Consensus 562 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~ 592 (680)
T 1ziw_A 562 LKIIDLGLNNLNTLPASVFNNQVSLKSLNLQ 592 (680)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECT
T ss_pred cceeECCCCCCCcCCHhHhCCCCCCCEEECC
Confidence 9999999999999998888888877665543
No 321
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.75 E-value=1.6e-08 Score=87.89 Aligned_cols=76 Identities=17% Similarity=0.179 Sum_probs=34.6
Q ss_pred ceEEEecCCCCCccCCCC--CCCccEEEeecceeChh-hccCCcccCeeeccCCcccccCCcccccccccccccccccce
Q psy12695 47 KETVLCKAKNFTTIPEQL--DVGTQVLDLSDNFLDRY-TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPI 123 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~--~~~~~~L~l~~n~i~~~-~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l 123 (369)
.+.++.+++.++.+|. + ...++.|+|++|+|..- .+.. ++|+.|+|++|+|+.++ .|..+++|+.|+|++|+|
T Consensus 65 L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~l~~~~~-~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~Ls~N~i 140 (263)
T 1xeu_A 65 LKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKNLNGIPS-ACLSRLFLDNNELRDTD--SLIHLKNLEILSIRNNKL 140 (263)
T ss_dssp CCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSCCTTCCC-SSCCEEECCSSCCSBSG--GGTTCTTCCEEECTTSCC
T ss_pred CCEEECCCCccCCChh-hccCCCCCEEECCCCccCCcCcccc-CcccEEEccCCccCCCh--hhcCcccccEEECCCCcC
Confidence 3455555555555543 2 13455555555554321 1112 44444444444444442 244444444444444444
Q ss_pred ecc
Q psy12695 124 QKI 126 (369)
Q Consensus 124 ~~~ 126 (369)
+.+
T Consensus 141 ~~~ 143 (263)
T 1xeu_A 141 KSI 143 (263)
T ss_dssp CBC
T ss_pred CCC
Confidence 444
No 322
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.75 E-value=6.7e-09 Score=84.25 Aligned_cols=79 Identities=27% Similarity=0.408 Sum_probs=61.0
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCC-eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVP-KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
|.+...+..+.+.+|+.+.|.|.+.+.|.+ .+.|++++..+.. ..+.|.|.+++.+|+|.
T Consensus 5 P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~-------------------~~~~L~i~~v~~~d~G~ 65 (176)
T 1f2q_A 5 PKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE-------------------TNSSLNIVNAKFEDSGE 65 (176)
T ss_dssp CCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSC-------------------CSSEEEECSCCGGGCEE
T ss_pred CEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCC-------------------CceEEEEeccceecCEE
Confidence 555566777889999999999999998886 6999999876531 24689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEe
Q psy12695 225 YTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
|.|.+.|..+.. .+.|.|.
T Consensus 66 Y~C~~~~~~~s~--~~~l~V~ 84 (176)
T 1f2q_A 66 YKCQHQQVNESE--PVYLEVF 84 (176)
T ss_dssp EEEECTTSSCCC--CEEEEEE
T ss_pred EEEEcCCccccc--cEEEEEe
Confidence 999999876644 4555555
No 323
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=98.74 E-value=1.9e-08 Score=90.46 Aligned_cols=96 Identities=21% Similarity=0.193 Sum_probs=66.2
Q ss_pred ceEEEecCC-CCCccCCCC-----------CCCccEEEeecceeC--hhhccCCcccCeeeccCCcccccCCcccccccc
Q psy12695 47 KETVLCKAK-NFTTIPEQL-----------DVGTQVLDLSDNFLD--RYTFRKLINLVELDLSYNQIQFVPSHILDSILE 112 (369)
Q Consensus 47 ~~~~~c~~~-~l~~ip~~~-----------~~~~~~L~l~~n~i~--~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~ 112 (369)
.+.++.+++ .+..+|..+ ...++.|+|++|+|. +..|.++++|+.|+|++|+|+.+++ .|..+++
T Consensus 152 L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~l~~-~l~~l~~ 230 (328)
T 4fcg_A 152 LRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSALGP-AIHHLPK 230 (328)
T ss_dssp CCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCCCCG-GGGGCTT
T ss_pred CCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCcCch-hhccCCC
Confidence 456777664 345677655 456777888887765 3457777778888888887777766 4677777
Q ss_pred cccccccccceecccCCcccccCcCcccccc
Q psy12695 113 LRELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 113 L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
|+.|+|++|.+....+..|..+++|...++.
T Consensus 231 L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~ 261 (328)
T 4fcg_A 231 LEELDLRGCTALRNYPPIFGGRAPLKRLILK 261 (328)
T ss_dssp CCEEECTTCTTCCBCCCCTTCCCCCCEEECT
T ss_pred CCEEECcCCcchhhhHHHhcCCCCCCEEECC
Confidence 7788887777766666667766666554443
No 324
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.74 E-value=1.2e-08 Score=99.47 Aligned_cols=96 Identities=21% Similarity=0.196 Sum_probs=82.7
Q ss_pred ceEEEecCCCCCccCC-CC--CCCccEEEeeccee---ChhhccCCcccCeeeccCCcccccCCcccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPE-QL--DVGTQVLDLSDNFL---DRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG 120 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~-~~--~~~~~~L~l~~n~i---~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 120 (369)
.+.++.+++.++.++. .+ -..+++|+|++|+| .+.+|.++++|++|+|++|+|+.+++.+|.++++|+.|+|++
T Consensus 35 l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 114 (606)
T 3t6q_A 35 TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQ 114 (606)
T ss_dssp CCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTT
T ss_pred CcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccc
Confidence 5789999999998854 44 25799999999985 478899999999999999999999999999999999999999
Q ss_pred cceecccCCcccccCcCccccc
Q psy12695 121 NPIQKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 121 N~l~~~~~~~f~~l~~l~~~~~ 142 (369)
|.|+.+.+..|.++++|...++
T Consensus 115 n~i~~l~~~~~~~l~~L~~L~L 136 (606)
T 3t6q_A 115 TGISSIDFIPLHNQKTLESLYL 136 (606)
T ss_dssp SCCSCGGGSCCTTCTTCCEEEC
T ss_pred cCcccCCcchhccCCcccEEEC
Confidence 9999998888888887665443
No 325
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.74 E-value=1.4e-08 Score=92.07 Aligned_cols=94 Identities=15% Similarity=0.146 Sum_probs=80.8
Q ss_pred CceEEEecCCCCCccCCCCC---CCccEEEeecce----eChhhccCCcccCe-eeccCCcccccCCccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQLD---VGTQVLDLSDNF----LDRYTFRKLINLVE-LDLSYNQIQFVPSHILDSILELRELK 117 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~~---~~~~~L~l~~n~----i~~~~f~~l~~L~~-L~Ls~N~l~~i~~~~f~~l~~L~~L~ 117 (369)
..+.++.++|+|+.||.+.. ..++.|+|++|+ |+.++|.++++|++ +++++|+|+.|++++|.++++|+.|+
T Consensus 31 ~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~ 110 (350)
T 4ay9_X 31 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 110 (350)
T ss_dssp TCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEE
T ss_pred CCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccc
Confidence 35789999999999997643 579999999998 45789999999876 67788999999999999999999999
Q ss_pred ccccceecccCCcccccCcCcc
Q psy12695 118 LSGNPIQKITHEAFINVPKLNL 139 (369)
Q Consensus 118 L~~N~l~~~~~~~f~~l~~l~~ 139 (369)
+++|.|+.+++..|....++..
T Consensus 111 l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 111 ISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp EEEECCSSCCCCTTCCBSSCEE
T ss_pred ccccccccCCchhhcccchhhh
Confidence 9999999999888776655443
No 326
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.74 E-value=1.1e-09 Score=109.82 Aligned_cols=93 Identities=27% Similarity=0.411 Sum_probs=0.0
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...+.+..+.+|+.++|.|.+.|.|.|.|.|++++..+..... + ......+.|.|.++..+|+|.|
T Consensus 667 P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~---------~--~~~~~~~~L~I~~v~~~D~G~Y 735 (772)
T 3v2a_R 667 PTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSG---------I--VLKDGNRNLTIRRVRKEDEGLY 735 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCC---------e--EEcCCCcEEEECcCCHHHCEEE
Confidence 4444455667889999999999999999999999999887653221 1 1122356899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEeecCC
Q psy12695 226 TCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|.|.|..|.....+.|.|...+.
T Consensus 736 ~C~a~N~~G~~~~~~~l~V~~~p~ 759 (772)
T 3v2a_R 736 TCQACSVLGCAKVEAFFIIEGAQE 759 (772)
T ss_dssp ------------------------
T ss_pred EEEEEeCCcceeEEEEEEEECCCC
Confidence 999999999999999999988764
No 327
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.73 E-value=4.2e-08 Score=81.96 Aligned_cols=94 Identities=22% Similarity=0.350 Sum_probs=64.2
Q ss_pred CCCeeeccCCeEEEEEEeeCCC---CCeEEEEeCC--eEe---eecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 152 TPDVTAEENENVTLSCRATGSP---VPKIKWIFKE--KII---ANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p---~p~i~W~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
|..+.+.+|+.++|.|.+.|.| .+.+.|++++ ... .............++..........|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 6778899999999999999987 4789999853 221 1100000001123454444455678999999999999
Q ss_pred EEEEEEEeCCceEE-EEEEEEEe
Q psy12695 224 IYTCRAKNGAGEVF-TNISLNVI 245 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~-~~~~l~v~ 245 (369)
.|.|.+.|..+... ....+.|.
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~ 109 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVL 109 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEEC
T ss_pred EEEEEEecCchhhcCCCeEEEEe
Confidence 99999999876532 33456664
No 328
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.73 E-value=1.2e-08 Score=83.79 Aligned_cols=61 Identities=18% Similarity=0.396 Sum_probs=51.5
Q ss_pred eccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCCceE
Q psy12695 157 AEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEV 236 (369)
Q Consensus 157 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~ 236 (369)
+.+|+.+.|.|.+ |.|.+.|++++..+.... ...+.|.|.++..+|+|.|+|.|.|..|..
T Consensus 119 ~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~----------------~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 119 SRGDGSVLLTCGL---TDKTIKWLKDGSIISPLN----------------ATKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CSSSCEEEEECSS---SCSCEEEEETTEECCCSS----------------CCSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred cCCCCeEEEEeeC---CCCeEEEEECCEECcccC----------------CCcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 4599999999998 889999999998764211 135689999999999999999999998876
No 329
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.73 E-value=4.3e-08 Score=84.62 Aligned_cols=90 Identities=18% Similarity=0.225 Sum_probs=62.3
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCC-CeEEEEeC--CeE---eeecccccccCCcceEEEEeecceeeEEEcccCC
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPV-PKIKWIFK--EKI---IANISSGLANMNKRQYIIKTINSLSNLTIVAVTM 219 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~-p~i~W~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 219 (369)
+.+...+..+.+.+|++++|.|.+.+.+. +.+.|+++ +.. +.............++.+........|.|.+++.
T Consensus 150 ~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 229 (256)
T 3juy_B 150 IVLTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEP 229 (256)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred eEEEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCH
Confidence 34455577888999999999999999886 89999983 221 1111111111122345554455567899999999
Q ss_pred CCCEEEEEEEEeCCce
Q psy12695 220 SDSGIYTCRAKNGAGE 235 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~g~ 235 (369)
+|+|.|.|.|.|..+.
T Consensus 230 ~DsG~Y~C~~~~~~~~ 245 (256)
T 3juy_B 230 EDFALYYCQVYGASSY 245 (256)
T ss_dssp GGCSEEEEEECCSSCC
T ss_pred hHCEEEEEEEeeCCCc
Confidence 9999999999986544
No 330
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.73 E-value=3.9e-08 Score=85.05 Aligned_cols=103 Identities=16% Similarity=0.215 Sum_probs=67.5
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCC-----eEEEEe--CCeEee---ecccccccCCcceEEEEeecceeeEEEc
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVP-----KIKWIF--KEKIIA---NISSGLANMNKRQYIIKTINSLSNLTIV 215 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p-----~i~W~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 215 (369)
|.+...+..+.+.+|++++|.|.+.+.|.+ .+.|++ ++..+. ............++..........|.|.
T Consensus 122 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 201 (256)
T 1nqb_A 122 IELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKIS 201 (256)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred ccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEEC
Confidence 334445667789999999999999998875 899999 444321 1111000111234544444556789999
Q ss_pred ccCCCCCEEEEEEEEeCCceEE-EEEEEEEeecC
Q psy12695 216 AVTMSDSGIYTCRAKNGAGEVF-TNISLNVIKVE 248 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~~g~~~-~~~~l~v~~~~ 248 (369)
+++.+|+|.|+|.+.|..+... ....|.|....
T Consensus 202 ~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~~ 235 (256)
T 1nqb_A 202 RVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRAA 235 (256)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEECC--
T ss_pred CCChHHCEEEEEEEccCCceEECCCEEEEEECCC
Confidence 9999999999999998654433 23566665443
No 331
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.73 E-value=2.2e-08 Score=77.34 Aligned_cols=96 Identities=17% Similarity=0.175 Sum_probs=63.4
Q ss_pred CCCCCeeeccCCeEEEEEEeeC---CCCCeEEEEeCCeEe----eec-----cc------c--cc----cCCcceEEEEe
Q psy12695 150 PITPDVTAEENENVTLSCRATG---SPVPKIKWIFKEKII----ANI-----SS------G--LA----NMNKRQYIIKT 205 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g---~p~p~i~W~~~~~~~----~~~-----~~------~--~~----~~~~~~~~~~~ 205 (369)
..+..+.+.+|++++|.|.+.+ .+.+.+.|++++... ... .. . .. ..-..++.+..
T Consensus 9 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~ 88 (135)
T 1xt5_A 9 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN 88 (135)
T ss_dssp CSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESC
T ss_pred CCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEec
Confidence 3456788999999999999853 677889999865321 100 00 0 00 00012333221
Q ss_pred ecceeeEEEcccCCCCCEEEEEEEEeC-----CceEEEEEEEEEee
Q psy12695 206 INSLSNLTIVAVTMSDSGIYTCRAKNG-----AGEVFTNISLNVIK 246 (369)
Q Consensus 206 ~~~~~~L~I~~v~~~D~G~Y~C~a~n~-----~g~~~~~~~l~v~~ 246 (369)
.....|.|.+++.+|+|.|.|.+.+. .|.....+.|.|..
T Consensus 89 -~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g 133 (135)
T 1xt5_A 89 -LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTG 133 (135)
T ss_dssp -TTSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEET
T ss_pred -CCCCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEec
Confidence 23468999999999999999999984 45566778887764
No 332
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.73 E-value=5e-08 Score=75.63 Aligned_cols=98 Identities=20% Similarity=0.225 Sum_probs=63.2
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCC-CCCeEEEEeCCeE---eeecccccccCCcceEEE-----EeecceeeEEEcccC
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGS-PVPKIKWIFKEKI---IANISSGLANMNKRQYII-----KTINSLSNLTIVAVT 218 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~---~~~~~~~~~~~~~~~~~~-----~~~~~~~~L~I~~v~ 218 (369)
+...+..+.+.+|++++|.|.+.+. +.+.+.|++++.. +........ . .++.. ........|.|.+++
T Consensus 11 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~-~--~r~~~~~~~~~~~~~~~~L~I~~v~ 87 (136)
T 2d9c_A 11 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH-F--PRVTTVSELTKRNNLDFSISISNIT 87 (136)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCC-C--SSBCCSSCSSSSSCCBCCEEESSCC
T ss_pred EEecCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCc-c--cceeeeeeeccCCCCEEEEEECCCC
Confidence 3445677899999999999999875 5678999997621 111111000 0 11111 001225689999999
Q ss_pred CCCCEEEEEEEEeCCc---eE--E-EEEEEEEeecC
Q psy12695 219 MSDSGIYTCRAKNGAG---EV--F-TNISLNVIKVE 248 (369)
Q Consensus 219 ~~D~G~Y~C~a~n~~g---~~--~-~~~~l~v~~~~ 248 (369)
.+|+|.|.|.+.+..+ .. . ..+.|.|...+
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~ 123 (136)
T 2d9c_A 88 PADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKP 123 (136)
T ss_dssp TTTCEEEEEEEEECCSSSCEEEEECCCEEEEEECCC
T ss_pred HHHCEEEEEEEEeCCCCcccceeeCCCeEEEEEeCC
Confidence 9999999999988643 11 1 34677777654
No 333
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.73 E-value=2e-08 Score=89.99 Aligned_cols=97 Identities=21% Similarity=0.244 Sum_probs=66.7
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCC-CCCeEEEEeCCeEe----eecccccccCCcceEEEEe-----ecceeeEEEccc
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGS-PVPKIKWIFKEKII----ANISSGLANMNKRQYIIKT-----INSLSNLTIVAV 217 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~~----~~~~~~~~~~~~~~~~~~~-----~~~~~~L~I~~v 217 (369)
+...+..+.+.+|+.+.|.|.+.+. |.+.|.|++++... ...... ...++.... ......|.|.++
T Consensus 6 v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~----~~~r~~~~~~~~~~~~~~~~L~I~~v 81 (327)
T 2wng_A 6 VIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEG----HFPRVTTVSESTKRENMDFSISISNI 81 (327)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSS----CCTTEEECC---CTTCCBCCEEECSC
T ss_pred EEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCC----CcceeeeecccccccCceeEEEEccC
Confidence 4455778899999999999999987 88999999987431 111110 001111111 134568999999
Q ss_pred CCCCCEEEEEEEEeCCceE-----EEEEEEEEeecC
Q psy12695 218 TMSDSGIYTCRAKNGAGEV-----FTNISLNVIKVE 248 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~g~~-----~~~~~l~v~~~~ 248 (369)
+.+|+|.|+|.+.|..+.. ...+.|.|...+
T Consensus 82 ~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p 117 (327)
T 2wng_A 82 TPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKP 117 (327)
T ss_dssp CGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCC
T ss_pred ccccCeEEEEEeecCCCcceeEeecCcEEEEEEecC
Confidence 9999999999999987641 134567776554
No 334
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.72 E-value=4.1e-08 Score=84.54 Aligned_cols=99 Identities=16% Similarity=0.243 Sum_probs=66.4
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCC-----CCeEEEEeCCe-----EeeecccccccCCcceEEEEeecceeeEEEccc
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSP-----VPKIKWIFKEK-----IIANISSGLANMNKRQYIIKTINSLSNLTIVAV 217 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p-----~p~i~W~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 217 (369)
+...+..+.+.+|++++|.|.+.+.| .+.+.|++++. .+.............++..........|.|.++
T Consensus 37 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 116 (252)
T 3bkj_L 37 MTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRV 116 (252)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCC
Confidence 34446778899999999999999988 68899998541 111110000001123455544455668999999
Q ss_pred CCCCCEEEEEEEEeCCceEE-EEEEEEEee
Q psy12695 218 TMSDSGIYTCRAKNGAGEVF-TNISLNVIK 246 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~g~~~-~~~~l~v~~ 246 (369)
+.+|+|.|.|.+.|..+... ....|.|..
T Consensus 117 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 146 (252)
T 3bkj_L 117 EAEDLGVYYCFQASLVPLTFGAGTKLELKR 146 (252)
T ss_dssp CGGGCEEEEEEECSBSSCEECCCEEEEECC
T ss_pred CcccCEEEEEEEEcCCccEECCCEEEEEeC
Confidence 99999999999998766432 234566643
No 335
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.72 E-value=6.4e-08 Score=74.67 Aligned_cols=95 Identities=21% Similarity=0.366 Sum_probs=65.2
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeC---CeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFK---EKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
+...|..+.+.+|++++|.|.+.+. ...+.|+++ +....... ....+|..........|+|.+++.+|+|.
T Consensus 21 v~Q~p~~~~v~~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~-----~~~~rf~~~~~~~~~~L~I~~~~~~Dsg~ 94 (134)
T 3kg5_A 21 IWQSPRFIARKRGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLK-----LEKGRMEESQNESLATLTIQGIRFEDNGI 94 (134)
T ss_dssp CEEECSEEEEETTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECC-----CCTTTEEEEECSSEEEEEECSCCTTTCEE
T ss_pred EEEeCCEEEEeCCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEE-----EECCeEEEEccCCEEEEEECCCCcCcCEE
Confidence 4445677899999999999999775 467999987 32221110 01235555545566789999999999999
Q ss_pred EEEEEEeCCc-e--EEEEEEEEEeecC
Q psy12695 225 YTCRAKNGAG-E--VFTNISLNVIKVE 248 (369)
Q Consensus 225 Y~C~a~n~~g-~--~~~~~~l~v~~~~ 248 (369)
|.|.+.+..+ . ......|.|...+
T Consensus 95 Y~C~~~~~~~~~~~fg~GT~L~V~~~p 121 (134)
T 3kg5_A 95 YFCQQKCNNTSEVYQGCGTELRVMGFS 121 (134)
T ss_dssp EEEEEECTTTCCEEECCCEEEEEECC-
T ss_pred EEEEEEcCCCCceEECCCEEEEEecCC
Confidence 9999988632 1 2233567776544
No 336
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.72 E-value=2.4e-08 Score=83.69 Aligned_cols=97 Identities=16% Similarity=0.237 Sum_probs=62.6
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCe---EEEEeCCeEeeeccccc-------ccCCcceEEE-------EeecceeeEEE
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPK---IKWIFKEKIIANISSGL-------ANMNKRQYII-------KTINSLSNLTI 214 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~---i~W~~~~~~~~~~~~~~-------~~~~~~~~~~-------~~~~~~~~L~I 214 (369)
|.++.+..|++++|.|.+.+.+.+. |.|++++.......... ......+... ......+.|.|
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 5668899999999999999888764 89999775442211000 0000111111 11223567999
Q ss_pred cccCCCCCEEEEEEEEeCCceEEEE-EEEEEeecC
Q psy12695 215 VAVTMSDSGIYTCRAKNGAGEVFTN-ISLNVIKVE 248 (369)
Q Consensus 215 ~~v~~~D~G~Y~C~a~n~~g~~~~~-~~l~v~~~~ 248 (369)
.+++.+|+|.|.|.+.|..|..... ..+.+...+
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~ 122 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQP 122 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCC
T ss_pred ccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCC
Confidence 9999999999999999887765443 444444433
No 337
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=98.72 E-value=7.5e-08 Score=74.46 Aligned_cols=95 Identities=22% Similarity=0.302 Sum_probs=61.9
Q ss_pred CCCeeeccCCeEEEEEEeeCCC---CCeEEEEeCCe-----EeeecccccccCCcceEEEEeecceeeEEEcccCCCCCE
Q psy12695 152 TPDVTAEENENVTLSCRATGSP---VPKIKWIFKEK-----IIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p---~p~i~W~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 223 (369)
+..+.+.+|++++|.|.+.+.+ .+.+.|+++.. .+.............++.+........|+|.+++.+|+|
T Consensus 12 ~~~v~v~~G~~vtL~C~~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~sL~I~~v~~~DsG 91 (135)
T 1p4b_L 12 ESALTTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 91 (135)
T ss_dssp CSEEEECTTCEEEEEEEETTSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESCCGGGCE
T ss_pred CCcEEEcCCCCEEEEEEecCCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEcCCCEEEEEECCCChhHCE
Confidence 3448999999999999998765 56799998531 121111111111234566555555678999999999999
Q ss_pred EEEEEEEeCCceEE-EEEEEEEee
Q psy12695 224 IYTCRAKNGAGEVF-TNISLNVIK 246 (369)
Q Consensus 224 ~Y~C~a~n~~g~~~-~~~~l~v~~ 246 (369)
.|.|.+.+...... ....|.|..
T Consensus 92 ~Y~C~~~~~~~~~fg~GT~L~V~~ 115 (135)
T 1p4b_L 92 IYFCALWYSNHWVFGGGTKLTVLG 115 (135)
T ss_dssp EEEEEEECSSCEEECCCEEEEEC-
T ss_pred EEEEEEecCCCCEECCCEEEEEEc
Confidence 99999987643222 234555544
No 338
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.72 E-value=2.8e-08 Score=82.86 Aligned_cols=79 Identities=18% Similarity=0.120 Sum_probs=61.1
Q ss_pred ccCCeEEEEEEeeCC-CCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCCceE
Q psy12695 158 EENENVTLSCRATGS-PVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEV 236 (369)
Q Consensus 158 ~~G~~~~l~C~~~g~-p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~ 236 (369)
-.|+.+.|.|.+.+. |.+.+.|++++..+... .++..........|.|.+++.+|+|.|+|.+.|..|..
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~---------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~ 85 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYS---------DRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGH 85 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCC---------SSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEE
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCC---------CeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcce
Confidence 467888899998875 57899999999776532 23333344455679999999999999999999999988
Q ss_pred EEEEEEEEe
Q psy12695 237 FTNISLNVI 245 (369)
Q Consensus 237 ~~~~~l~v~ 245 (369)
...+.+.|.
T Consensus 86 ~~~~~l~v~ 94 (212)
T 2r15_A 86 QKTVDLSGQ 94 (212)
T ss_dssp EEEEEECHH
T ss_pred EEEEEEEEe
Confidence 877777554
No 339
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.72 E-value=1.7e-08 Score=97.73 Aligned_cols=94 Identities=17% Similarity=0.130 Sum_probs=68.9
Q ss_pred ceEEEecCCCCCccCCC-C--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQ-L--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG 120 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~-~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 120 (369)
.+.++.++++++.++.. + ...+++|+|++|+|. +.+|.++++|++|+|++|+|+.+++.+|.++.+|+.|+|++
T Consensus 30 l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 109 (570)
T 2z63_A 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVE 109 (570)
T ss_dssp CCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccc
Confidence 45788888888877643 3 246788888888743 56788888888888888888888777788888888888888
Q ss_pred cceecccCCcccccCcCccc
Q psy12695 121 NPIQKITHEAFINVPKLNLE 140 (369)
Q Consensus 121 N~l~~~~~~~f~~l~~l~~~ 140 (369)
|.++.++...|.++.+|...
T Consensus 110 n~l~~l~~~~~~~l~~L~~L 129 (570)
T 2z63_A 110 TNLASLENFPIGHLKTLKEL 129 (570)
T ss_dssp SCCCCSTTCSCTTCTTCCEE
T ss_pred cccccCCCccccccccccEE
Confidence 87777776666666665443
No 340
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.72 E-value=1.7e-08 Score=89.64 Aligned_cols=94 Identities=20% Similarity=0.201 Sum_probs=49.0
Q ss_pred eEEEecCCCCCccCCC-C--CCCccEEEeecceeC----hhhccCCcccCeeeccCCcccccCCcccccccccccccccc
Q psy12695 48 ETVLCKAKNFTTIPEQ-L--DVGTQVLDLSDNFLD----RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG 120 (369)
Q Consensus 48 ~~~~c~~~~l~~ip~~-~--~~~~~~L~l~~n~i~----~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 120 (369)
+.++.+++.+..++.. + ...++.|+|++|.+. +..|.++++|+.|+|++|+|+.+++..|..+++|+.|+|++
T Consensus 129 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 208 (306)
T 2z66_A 129 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 208 (306)
T ss_dssp CEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCC
Confidence 3445555554433222 2 134555555555543 24455555666666666666655555555555666666666
Q ss_pred cceecccCCcccccCcCcccc
Q psy12695 121 NPIQKITHEAFINVPKLNLED 141 (369)
Q Consensus 121 N~l~~~~~~~f~~l~~l~~~~ 141 (369)
|.|+.++...|..+++|...+
T Consensus 209 N~l~~~~~~~~~~l~~L~~L~ 229 (306)
T 2z66_A 209 NNFFSLDTFPYKCLNSLQVLD 229 (306)
T ss_dssp SCCSBCCSGGGTTCTTCCEEE
T ss_pred CccCccChhhccCcccCCEeE
Confidence 666555555555555544433
No 341
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.72 E-value=2.4e-08 Score=95.64 Aligned_cols=90 Identities=19% Similarity=0.290 Sum_probs=71.4
Q ss_pred CCeeeccCCeEEEEEEeeCCCCCe-EEEEeCCeEeeecccccccCCcceEEEEeec----ceeeEEEcccCCCCCEEEEE
Q psy12695 153 PDVTAEENENVTLSCRATGSPVPK-IKWIFKEKIIANISSGLANMNKRQYIIKTIN----SLSNLTIVAVTMSDSGIYTC 227 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~L~I~~v~~~D~G~Y~C 227 (369)
....+.+|+.+.|.|.+.|.|.|. +.|++++..+..... ++...... ..+.|.|.+++.+|+|.|+|
T Consensus 321 ~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~--------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 392 (524)
T 2ec8_A 321 TTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWE--------DYPKSENESNIRYVSELHLTRLKGTEGGTYTF 392 (524)
T ss_dssp SEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBC--------CEESCCSSSCCEEEEEEEECSCCGGGCEEEEE
T ss_pred ceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCcc--------ceeEEccCCCceeEEEEEEeecCcccCeEEEE
Confidence 357889999999999999999999 999999876653221 11111111 24689999999999999999
Q ss_pred EEEeCCceEEEEEEEEEeecCCc
Q psy12695 228 RAKNGAGEVFTNISLNVIKVETA 250 (369)
Q Consensus 228 ~a~n~~g~~~~~~~l~v~~~~~~ 250 (369)
.|.|..|.....+.|.|..+|..
T Consensus 393 ~a~N~~g~~~~~~~l~V~~~P~i 415 (524)
T 2ec8_A 393 LVSNSDVNAAIAFNVYVNTKPEI 415 (524)
T ss_dssp EEECSSCEEEEEEEEEECEEEEE
T ss_pred EEEecCceEEEEEEEEEecCCeE
Confidence 99999999999999999876643
No 342
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.72 E-value=8.4e-09 Score=86.06 Aligned_cols=75 Identities=20% Similarity=0.352 Sum_probs=56.4
Q ss_pred ccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEccc-CCCCCEEEEEEEEeCCce-
Q psy12695 158 EENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAV-TMSDSGIYTCRAKNGAGE- 235 (369)
Q Consensus 158 ~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v-~~~D~G~Y~C~a~n~~g~- 235 (369)
.+|+.++|.|. |.|.|.+.|++++..+...... .... ...+.|.|.++ +.+|+|.|+|.|.|..|.
T Consensus 126 ~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~------~~~~----~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~ 193 (204)
T 1sy6_A 126 ISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDD------KNIG----SDEDHLSLKEFSELEQSGYYVCYPRGSKPED 193 (204)
T ss_dssp EETTEEEEECS--CCCSSCEEEEETTEEESCCTTC------TTEE----EETTEEEETTCCHHHHCEEEEEEETTSCGGG
T ss_pred ecCCcEEEEcC--CCCCCceEEEECCEECCCccCC------ceEe----cCCCEEEEeeCCccccCEEEEEEeccCCCCc
Confidence 38999999998 8899999999999876432111 0111 12568999999 999999999999999996
Q ss_pred EEEEEEEEE
Q psy12695 236 VFTNISLNV 244 (369)
Q Consensus 236 ~~~~~~l~v 244 (369)
.+..+.|.+
T Consensus 194 ~s~~l~l~~ 202 (204)
T 1sy6_A 194 ANFYLYLRA 202 (204)
T ss_dssp SSCEEEEEE
T ss_pred eeEEEEEEE
Confidence 345555554
No 343
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.72 E-value=1.8e-08 Score=88.52 Aligned_cols=96 Identities=17% Similarity=0.276 Sum_probs=66.0
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCC-CeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPV-PKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~-p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
|.+...+....+.+|+.+.|.|.+.|.|. +.+.|++++..+......... ..+ ....+.|.|.+++.+|+|.
T Consensus 187 p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~--~~~-----~~~~~~L~i~~v~~~d~G~ 259 (292)
T 4dkd_C 187 PALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFH--NNR-----YQKVLTLNLDQVDFQHAGN 259 (292)
T ss_dssp CEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEE--TTE-----EEEEEEEEESSCCTTSCEE
T ss_pred CeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceec--cce-----eeeEEEEEECccChhcCeE
Confidence 33444455666789999999999998775 457888877644321111000 001 1134689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecC
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
|+|.|.|..|.....+.|.|....
T Consensus 260 Y~C~a~N~~g~~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 260 YSCVASNVQGKHSTSMFFRVVESA 283 (292)
T ss_dssp EEEEEECSSCEEEEEEEECC----
T ss_pred EEEEEecCCCCceeEEEEEEeeCC
Confidence 999999999999999999887654
No 344
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.71 E-value=2.2e-09 Score=97.13 Aligned_cols=90 Identities=20% Similarity=0.282 Sum_probs=39.7
Q ss_pred eeccCCeEEEEEEee----CCCCCeEEEEeCCeEeeecccccccCCcceEEEE---eecceeeEEEcccCCCCC-EEEEE
Q psy12695 156 TAEENENVTLSCRAT----GSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK---TINSLSNLTIVAVTMSDS-GIYTC 227 (369)
Q Consensus 156 ~~~~G~~~~l~C~~~----g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~L~I~~v~~~D~-G~Y~C 227 (369)
.+.+|+.+.|.|.+. |.|.|.+.|++++..+...... ..... ..... .....+.|.|.++..+|+ |.|+|
T Consensus 237 ~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~-~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C 314 (349)
T 4dep_C 237 EKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITID-VTINE-SISHSRTEDETRTQILSIKKVTSEDLKRSYVC 314 (349)
T ss_dssp --------CCCEEEEECCCTTCCCEEEEESSCC---------CCCCE-EEECCTTCCEEEEECC-------------CEE
T ss_pred EEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCc-ccccc-ceeeecCCCcEEEEEEEEeeccHHHcCCcEEE
Confidence 788999999999998 6789999999998776541111 10000 00000 011245699999999999 99999
Q ss_pred EEEeCCceEEEEEEEEEeec
Q psy12695 228 RAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 228 ~a~n~~g~~~~~~~l~v~~~ 247 (369)
.|.|..|.....+.|.|..+
T Consensus 315 ~a~N~~G~~~~~~~l~v~~~ 334 (349)
T 4dep_C 315 HARSAKGEVAKAAKVKQKVP 334 (349)
T ss_dssp EEECSSCEEEEECC------
T ss_pred EEEcCCCcEEEEEEEeeecC
Confidence 99999999999999888653
No 345
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.71 E-value=1.5e-07 Score=71.42 Aligned_cols=97 Identities=14% Similarity=0.211 Sum_probs=61.6
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCC--CCCeEEEEeCCe-----EeeecccccccCCcceEEEE--eecceeeEEEcccC
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGS--PVPKIKWIFKEK-----IIANISSGLANMNKRQYIIK--TINSLSNLTIVAVT 218 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~--p~p~i~W~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~I~~v~ 218 (369)
+...+..+.+.+|++++|.|...+. ....+.|+++.. .+.............++.+. ...+...|+|.+++
T Consensus 13 ~~~~~~~v~~~~G~svtL~C~~s~~~~~~~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~ 92 (122)
T 1hkf_A 13 AQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLR 92 (122)
T ss_dssp --CCCEEEEECTTCCEEEEEECCCCTTCCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSCC
T ss_pred hccCCceEEEecCCCEEEEeEccCCCCcccEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCcCCEEEEEEeCCC
Confidence 3445677889999999999998753 235799998631 12211111111223455552 33456789999999
Q ss_pred CCCCEEEEEEEEeCC-ceEEEEEEEEE
Q psy12695 219 MSDSGIYTCRAKNGA-GEVFTNISLNV 244 (369)
Q Consensus 219 ~~D~G~Y~C~a~n~~-g~~~~~~~l~v 244 (369)
.+|+|.|.|.+.... ......+.|.+
T Consensus 93 ~~Dsg~Y~C~v~~~~~~~~~~~~~l~L 119 (122)
T 1hkf_A 93 EEDSGHYWCRIYRPSDNSVSKSVRFYL 119 (122)
T ss_dssp GGGCEEEEEEEECTTTCCEEEEEEEEE
T ss_pred HHHCEEEEEEEEcCCCCcccccEEEEE
Confidence 999999999998764 23444444443
No 346
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.71 E-value=3.6e-08 Score=73.55 Aligned_cols=83 Identities=20% Similarity=0.324 Sum_probs=58.4
Q ss_pred CCCCeeeccCCeEEEEEEee-CCCCCeEEEEeCC--e---Eeeecc-cc-cc----cCCcceEEEEeecceeeEEEcccC
Q psy12695 151 ITPDVTAEENENVTLSCRAT-GSPVPKIKWIFKE--K---IIANIS-SG-LA----NMNKRQYIIKTINSLSNLTIVAVT 218 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~-g~p~p~i~W~~~~--~---~~~~~~-~~-~~----~~~~~~~~~~~~~~~~~L~I~~v~ 218 (369)
.|..+.+.+|++++|.|.+. +.+.+.+.|++.. . .+.... .. .. .....++.+........|+|.+++
T Consensus 5 ~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~ 84 (111)
T 2qhl_A 5 ELHVKTVKRGENVTMECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIGTR 84 (111)
T ss_dssp BCEEEECCTTCCEEECCBCTTCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEESSCC
T ss_pred CCceEEEeCCCCEEEEEEccCCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEcCCeEEEEECCCC
Confidence 45678899999999999997 7777789999853 1 122111 11 00 011345666544556789999999
Q ss_pred CCCCEEEEEEEEeCC
Q psy12695 219 MSDSGIYTCRAKNGA 233 (369)
Q Consensus 219 ~~D~G~Y~C~a~n~~ 233 (369)
.+|+|.|.|.+.+..
T Consensus 85 ~~DsG~Y~C~~~~~~ 99 (111)
T 2qhl_A 85 EDDGGEYFCGEVEGN 99 (111)
T ss_dssp GGGCEEEEEEEEETT
T ss_pred hhHCEEEEEEEccCC
Confidence 999999999998864
No 347
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.71 E-value=1.4e-08 Score=94.56 Aligned_cols=84 Identities=19% Similarity=0.276 Sum_probs=60.7
Q ss_pred CCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeC
Q psy12695 153 PDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 232 (369)
..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+........ ....+.+.....+|+|.|+|.|.|.
T Consensus 334 ~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~-------------~~~~~~~~~~~~~D~G~YtC~A~N~ 400 (423)
T 3qs7_E 334 EDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLD-------------NGYSISKFCNHKHQPGEYIFHAEND 400 (423)
T ss_dssp CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCS-------------SSSEEEEECCCTTCCSCEEEEEEET
T ss_pred ccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCcccccc-------------CCcEEEEEecccccCEEEEEEEEcC
Confidence 356788999999999999999999999999988764321000 0111222456678999999999999
Q ss_pred CceEEEEEEEEEeecCC
Q psy12695 233 AGEVFTNISLNVIKVET 249 (369)
Q Consensus 233 ~g~~~~~~~l~v~~~~~ 249 (369)
.|.....+.|.|...+.
T Consensus 401 ~G~~~~s~~L~v~~~p~ 417 (423)
T 3qs7_E 401 DAQFTKMFTLNIRSGTK 417 (423)
T ss_dssp TEEEEEEEEEC------
T ss_pred CceEEEEEEEEEecCCc
Confidence 99999999999987764
No 348
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.71 E-value=3.9e-08 Score=89.94 Aligned_cols=87 Identities=29% Similarity=0.353 Sum_probs=70.8
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .......|.|.+++.+|+|.|.|.|.|
T Consensus 214 ~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~---------------~~~~~~~L~i~~~~~~d~G~Y~C~a~n 278 (382)
T 1cs6_A 214 PADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSK---------------WLSSEPLLHIQNVDFEDEGTYECEAEN 278 (382)
T ss_dssp CSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCC---------------CSBSSSEEEECSCCGGGCEEEEEEEEE
T ss_pred CCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccE---------------EecCCcEEEEccCChhhCEEEEEEEEc
Confidence 45677889999999999999999999999987654320 112356899999999999999999999
Q ss_pred CCceEEEEEEEEEeecCCcccC
Q psy12695 232 GAGEVFTNISLNVIKVETAVAQ 253 (369)
Q Consensus 232 ~~g~~~~~~~l~v~~~~~~~~~ 253 (369)
..|.....+.|.|...+.....
T Consensus 279 ~~g~~~~~~~l~V~~~p~~~~~ 300 (382)
T 1cs6_A 279 IKGRDTYQGRIIIHAQPDWLDV 300 (382)
T ss_dssp TTEEEEEEEEEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEEecCCCcccC
Confidence 9999999999998876654433
No 349
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.71 E-value=2.5e-08 Score=86.50 Aligned_cols=96 Identities=23% Similarity=0.369 Sum_probs=66.7
Q ss_pred CCCCeeeccCCeEEEEEEe---eCCCCCeEEEEeCCeE------eeec----------ccccccCCcceEEE--Eeecce
Q psy12695 151 ITPDVTAEENENVTLSCRA---TGSPVPKIKWIFKEKI------IANI----------SSGLANMNKRQYII--KTINSL 209 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~---~g~p~p~i~W~~~~~~------~~~~----------~~~~~~~~~~~~~~--~~~~~~ 209 (369)
.+....+.+|+.+.|.|.+ .+.|.|.+.|+++++. .... ....+ . .+... ......
T Consensus 124 ~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~r~~~~~~~~~~~ 200 (268)
T 3mj6_A 124 EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRF--R-NRVDLTGDISRND 200 (268)
T ss_dssp CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTT--T-TTEEECSCGGGTB
T ss_pred CCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCcccccccccc--c-cceEeeccCCCCe
Confidence 3456788999999999999 6779999999994321 1100 00000 0 01111 011346
Q ss_pred eeEEEcccCCCCCEEEEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 210 SNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 210 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|...++
T Consensus 201 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p 240 (268)
T 3mj6_A 201 GSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEF 240 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC--
T ss_pred EEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCCC
Confidence 7899999999999999999999999999999999965443
No 350
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.71 E-value=1e-08 Score=83.30 Aligned_cols=66 Identities=17% Similarity=0.189 Sum_probs=53.0
Q ss_pred cCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCCceEEE
Q psy12695 159 ENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFT 238 (369)
Q Consensus 159 ~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~ 238 (369)
.+..+.|.|.+.|.|.|.+.|++++..+... ..+.|.+++.+|+|.|.|.|.|..|....
T Consensus 109 ~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~--------------------~~~~i~~~~~~d~G~Y~C~a~N~~g~~~~ 168 (176)
T 1hng_A 109 ECSNATLTCEVLEGTDVELKLYQGKEHLRSL--------------------RQKTMSYQWTNLRAPFKCKAVNRVSQESE 168 (176)
T ss_dssp ETTTTEEEEECSSCSSCEEEEEETTEEEEEE--------------------SSSEEEEECSCCSSCEEEEEEETTEEEEE
T ss_pred cCCcEEEEEEecCCCCcEEEEEECCEECCCC--------------------CcEEEEEEEccCCeEEEEEEEecCCCcee
Confidence 3556999999999999999999998776531 12445577899999999999999999887
Q ss_pred EEEEEE
Q psy12695 239 NISLNV 244 (369)
Q Consensus 239 ~~~l~v 244 (369)
.+.|.+
T Consensus 169 ~~~l~~ 174 (176)
T 1hng_A 169 MEVVNC 174 (176)
T ss_dssp EECCCC
T ss_pred cccccC
Confidence 766544
No 351
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.71 E-value=4.2e-08 Score=73.61 Aligned_cols=97 Identities=20% Similarity=0.253 Sum_probs=61.8
Q ss_pred CCCCeeeccCCeEEEEEEeeCC--CCCeEEEEeCC-------eEeeecccccc-cCCcceEEEE--eecceeeEEEcccC
Q psy12695 151 ITPDVTAEENENVTLSCRATGS--PVPKIKWIFKE-------KIIANISSGLA-NMNKRQYIIK--TINSLSNLTIVAVT 218 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~--p~p~i~W~~~~-------~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~L~I~~v~ 218 (369)
.|..+.+.+|++++|.|.+... ....+.|++.. ..+........ .....++.+. ...+...|+|.+++
T Consensus 3 sp~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 82 (115)
T 2or7_A 3 SHTAVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTV 82 (115)
T ss_dssp ---CEEEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCC
T ss_pred CccEEEEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCC
Confidence 3567889999999999998653 24579999975 22221111100 0112233322 12345689999999
Q ss_pred CCCCEEEEEEEEeCCceEEEEEEEEEeec
Q psy12695 219 MSDSGIYTCRAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 219 ~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~ 247 (369)
.+|+|.|.|.+.+........+.|.|...
T Consensus 83 ~~DsG~Y~C~v~~~~~~~~~~v~L~V~~~ 111 (115)
T 2or7_A 83 VGDGGPYCCVVEIPGAFHFVDYMLEVKPE 111 (115)
T ss_dssp GGGCEEEEEEECCTTSCEEEEEEEEEESC
T ss_pred HHHCEEEEEEEECCCceeEEEEEEEEcCC
Confidence 99999999999876555566677777543
No 352
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.71 E-value=4.8e-08 Score=72.62 Aligned_cols=86 Identities=17% Similarity=0.276 Sum_probs=56.0
Q ss_pred CeeeccCCeEEEEEEeeCCCCC-----eEEEEeCCeEee-ecccccc------cCCcceEEEEeecceeeEEEcccCCCC
Q psy12695 154 DVTAEENENVTLSCRATGSPVP-----KIKWIFKEKIIA-NISSGLA------NMNKRQYIIKTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p-----~i~W~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~L~I~~v~~~D 221 (369)
.+.+.+|++++|.|.+.+.|.+ .+.|++++.... ....+.. ..-..+... ......|.|.+++.+|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~sL~I~~v~~~D 80 (110)
T 1ncn_A 3 KIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSF--DSDSWTLRLHNLQIKD 80 (110)
T ss_dssp EEEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEE--ETTTTEEEECSCCGGG
T ss_pred EEEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEE--ECCCEEEEEcCCChHH
Confidence 4678999999999999876544 399999764211 1100000 000112222 2235789999999999
Q ss_pred CEEEEEEEEeCCceEEEEEE
Q psy12695 222 SGIYTCRAKNGAGEVFTNIS 241 (369)
Q Consensus 222 ~G~Y~C~a~n~~g~~~~~~~ 241 (369)
+|.|.|.+.+..+.....+.
T Consensus 81 ~G~Y~C~v~~~~~~~~~~~~ 100 (110)
T 1ncn_A 81 KGLYQCIIHHKKPTGMIRIH 100 (110)
T ss_dssp CEEEEEEEEEECSSSEEEEE
T ss_pred CEEEEEEEEcCCCCceEEEE
Confidence 99999999988766544443
No 353
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.71 E-value=2.8e-08 Score=82.20 Aligned_cols=72 Identities=15% Similarity=0.080 Sum_probs=50.2
Q ss_pred CeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEE-eecceeeEEEcccCCCCCEEEEEEEEeC
Q psy12695 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK-TINSLSNLTIVAVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 232 (369)
...+.+|+.++|.|.+.+. .+.+.|++++..+..... .+... .......|.|.+++.+|+|.|.|.|.|.
T Consensus 109 ~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~--------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 179 (198)
T 1ugn_A 109 SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCL--------NSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDS 179 (198)
T ss_dssp CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEE--------EC------CCEEEEEECCCCTTSCEEEEEEEECT
T ss_pred ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccc--------cccccCCCcceeEEEecccCcccCeEEEEEEEeC
Confidence 3678899999999999988 789999999876532110 00000 1112478999999999999999999998
Q ss_pred Cc
Q psy12695 233 AG 234 (369)
Q Consensus 233 ~g 234 (369)
.+
T Consensus 180 ~~ 181 (198)
T 1ugn_A 180 NS 181 (198)
T ss_dssp TS
T ss_pred CC
Confidence 65
No 354
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.17 E-value=1.6e-09 Score=80.83 Aligned_cols=83 Identities=20% Similarity=0.202 Sum_probs=56.9
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCe--Ee---eecccccccCCcceEEEEe--ecceeeEEEcccCCCCC
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKEK--II---ANISSGLANMNKRQYIIKT--INSLSNLTIVAVTMSDS 222 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~--~~---~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~~D~ 222 (369)
..|..+.+.+|++++|.|.+.+.+.+.+.|+++.. .. .............++.+.. ......|+|.+++.+|+
T Consensus 4 Q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds 83 (110)
T 1u3h_A 4 QSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDS 83 (110)
Confidence 44677889999999999999888888999998642 11 1000000011123444332 33456899999999999
Q ss_pred EEEEEEEEeC
Q psy12695 223 GIYTCRAKNG 232 (369)
Q Consensus 223 G~Y~C~a~n~ 232 (369)
|.|.|.+.+.
T Consensus 84 G~Y~C~~~~~ 93 (110)
T 1u3h_A 84 ATYFCAASAN 93 (110)
Confidence 9999999875
No 355
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.70 E-value=7.1e-08 Score=80.21 Aligned_cols=90 Identities=16% Similarity=0.100 Sum_probs=61.6
Q ss_pred eeeccCCeEEEEEEeeCCCC---CeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 155 VTAEENENVTLSCRATGSPV---PKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 155 ~~~~~G~~~~l~C~~~g~p~---p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
..+.+|+.++|.|.+.|.++ +.|.|++++..+.............. ......|.|..+..+|.|.|+|.|.|
T Consensus 101 ~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~-----~~~~~~l~i~~~~~d~~g~ytC~A~n 175 (202)
T 1vca_A 101 GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSL-----ETKSLEVTFTPVIEDIGKVLVCRAKL 175 (202)
T ss_dssp SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCC-----EEEEEEEEECCCGGGTTCEEEEEEEE
T ss_pred eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcc-----eEEEEEEEEEeeeccCCCeEEEEEEc
Confidence 56889999999999988643 36899999987653211000000000 11234678888888899999999999
Q ss_pred CCce-------EEEEEEEEEeecCC
Q psy12695 232 GAGE-------VFTNISLNVIKVET 249 (369)
Q Consensus 232 ~~g~-------~~~~~~l~v~~~~~ 249 (369)
..|. ....+.|.|..+|.
T Consensus 176 ~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 176 HIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CSCCCTTSCSEEEEEEECCEECCC-
T ss_pred cccCCCCcceeEeeEEEEEEecCCC
Confidence 8765 45678888887653
No 356
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=98.70 E-value=6.9e-08 Score=72.09 Aligned_cols=82 Identities=16% Similarity=0.271 Sum_probs=56.4
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--e---Eeeeccccccc----CCcceEEEEeecceeeEEEcccCCC
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--K---IIANISSGLAN----MNKRQYIIKTINSLSNLTIVAVTMS 220 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~L~I~~v~~~ 220 (369)
..|..+.+.+|++++|.|.+.+.+.+.+.|++.. . .+......... ....++........ .|.|.+++.+
T Consensus 6 q~p~~~~v~~G~~vtL~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~-~L~I~~~~~~ 84 (112)
T 1fo0_B 6 QNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDT-ELRLQVANMS 84 (112)
T ss_dssp EECSEEECCTTCCEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEETT-EEEEEEESCC
T ss_pred eCCCeEEEecCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCCC-eEEEcCCCHh
Confidence 3466788999999999999977677889999853 1 12211111100 01145655444444 8999999999
Q ss_pred CCEEEEEEEEeC
Q psy12695 221 DSGIYTCRAKNG 232 (369)
Q Consensus 221 D~G~Y~C~a~n~ 232 (369)
|+|.|.|.+.+.
T Consensus 85 Dsg~Y~C~~~~~ 96 (112)
T 1fo0_B 85 QGRTLYCTCSAD 96 (112)
T ss_dssp SCEEEEEEEESS
T ss_pred HCEEEEEEEEcC
Confidence 999999999764
No 357
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.70 E-value=1.4e-08 Score=83.26 Aligned_cols=71 Identities=17% Similarity=0.310 Sum_probs=56.6
Q ss_pred eeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcc-cCCCCCEEEEEEEEeCC
Q psy12695 155 VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVA-VTMSDSGIYTCRAKNGA 233 (369)
Q Consensus 155 ~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~-v~~~D~G~Y~C~a~n~~ 233 (369)
..+..|+.+.|.|.+.+ +. .|.|++++..+... ....|.|.+ ++.+|+|.|+|.|.|..
T Consensus 9 ~v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~------------------~~~~L~I~~~~~~~D~G~Y~C~a~n~~ 68 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK------------------HDKHLVLQDFSEVEDSGYYVCYTPASN 68 (186)
T ss_dssp EEEEETTEEEEECSSCC-CT-TCEEEETTEEECSC------------------CCSEEEEESCCTTTSCEEEEEECSSCC
T ss_pred EEEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC------------------CCCEEEECCCCccccCEEEEEEEEeCC
Confidence 44578999999999988 44 49999999876531 134799999 99999999999999999
Q ss_pred ceEEEEEEEEEe
Q psy12695 234 GEVFTNISLNVI 245 (369)
Q Consensus 234 g~~~~~~~l~v~ 245 (369)
|.....+.+.|.
T Consensus 69 g~~~~~~~~~v~ 80 (186)
T 1jbj_A 69 KNTYLYLKARVG 80 (186)
T ss_dssp CCCCEEECCCCC
T ss_pred CcEEEEEEEEEe
Confidence 886555555554
No 358
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.70 E-value=9e-08 Score=80.18 Aligned_cols=94 Identities=15% Similarity=0.192 Sum_probs=62.2
Q ss_pred CCCeeeccCCeEEEEEEeeC-CC-CCeEEEEeCCe--Ee---eecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 152 TPDVTAEENENVTLSCRATG-SP-VPKIKWIFKEK--II---ANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g-~p-~p~i~W~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
|..+.+.+|+.++|.|.+.+ .+ .+.+.|++++. .. .............++..........|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 67788999999999999644 43 57899998541 11 11110000111234555445556789999999999999
Q ss_pred EEEEEEeCCc-e-EEEEEEEEEe
Q psy12695 225 YTCRAKNGAG-E-VFTNISLNVI 245 (369)
Q Consensus 225 Y~C~a~n~~g-~-~~~~~~l~v~ 245 (369)
|.|.+.|..+ . ......|.|.
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~ 109 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIK 109 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEEC
T ss_pred EEEEEEeCCCcceECCCEEEEEc
Confidence 9999999886 2 2233456664
No 359
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.70 E-value=4.9e-08 Score=84.02 Aligned_cols=100 Identities=16% Similarity=0.252 Sum_probs=66.7
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCC-----CCeEEEEeCC--eEe---eecccccccCCcceEEEEeecceeeEEEc
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSP-----VPKIKWIFKE--KII---ANISSGLANMNKRQYIIKTINSLSNLTIV 215 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p-----~p~i~W~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 215 (369)
+.+...+..+.+.+|+.++|.|.+.+.| .+.+.|++++ ... .............++..........|.|.
T Consensus 39 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 118 (254)
T 2c1o_A 39 LVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKIS 118 (254)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred eeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEEC
Confidence 4444457788999999999999999988 4899999743 211 11000000111234554444556689999
Q ss_pred ccCCCCCEEEEEEEEeCCceEEE-EEEEEEe
Q psy12695 216 AVTMSDSGIYTCRAKNGAGEVFT-NISLNVI 245 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~~g~~~~-~~~l~v~ 245 (369)
+++.+|+|.|.|.+.|..+.... ...+.|.
T Consensus 119 ~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~ 149 (254)
T 2c1o_A 119 RVEAEDLGIYYCVQGSHFPPTFGAGTKLELK 149 (254)
T ss_dssp SCCGGGCSEEEEEECSSSSCEEBCCEEEEEC
T ss_pred cCCcccCEEEEEEEEcCcceEecCCEEEEEC
Confidence 99999999999999998664322 2355554
No 360
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.70 E-value=2.6e-08 Score=89.97 Aligned_cols=97 Identities=13% Similarity=0.171 Sum_probs=69.1
Q ss_pred cCCCCCeeeccCCeEEEEEEeeCCCC-----------CeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEccc
Q psy12695 149 RPITPDVTAEENENVTLSCRATGSPV-----------PKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAV 217 (369)
Q Consensus 149 ~~~~~~~~~~~G~~~~l~C~~~g~p~-----------p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 217 (369)
.....++.+.+|+.+.|.|.+.+.|. +.+.|++++................+.. ...+.|.|.++
T Consensus 11 ~~~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~----~~~~~L~i~~~ 86 (349)
T 4dep_C 11 LDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRIS----KEKDVLWFRPT 86 (349)
T ss_dssp ECCCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEE----EETTEEEESSC
T ss_pred cceeeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEe----ecCCEEEEccC
Confidence 33456788999999999999998765 8999999874211000000000111211 12458999999
Q ss_pred CCCCCEEEEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 218 TMSDSGIYTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
+.+|+|.|.|.|.|..|.....+.|.|...+.
T Consensus 87 ~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~ 118 (349)
T 4dep_C 87 LLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDS 118 (349)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEECCCT
T ss_pred ChhhCEEEEEEEecCCceEEEEEEEEEecCCc
Confidence 99999999999999999988889999987553
No 361
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.70 E-value=3e-08 Score=83.82 Aligned_cols=100 Identities=22% Similarity=0.389 Sum_probs=67.7
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCC-CeEEEEeCCeEee--ecccccccCCcceEEEE---------eecceeeEEEccc
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPV-PKIKWIFKEKIIA--NISSGLANMNKRQYIIK---------TINSLSNLTIVAV 217 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~-p~i~W~~~~~~~~--~~~~~~~~~~~~~~~~~---------~~~~~~~L~I~~v 217 (369)
..|.++.+.+|+.+.|.|.+.+.|. +.+.|++++.... ...............+. .....+.|.|.++
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v 84 (231)
T 2pet_A 5 SVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEA 84 (231)
T ss_dssp CCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSC
T ss_pred cCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEccc
Confidence 3567889999999999999999985 8999998653211 00000000000000011 0122345999999
Q ss_pred CCCCCEEEEEEEEeCC-ceEEEEEEEEEeecCC
Q psy12695 218 TMSDSGIYTCRAKNGA-GEVFTNISLNVIKVET 249 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~-g~~~~~~~l~v~~~~~ 249 (369)
+.+|+|.|.|.+.+.. |.....+.|.|...+.
T Consensus 85 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~ 117 (231)
T 2pet_A 85 QVGDERDYVCVVRAGAAGTAEATARLNVFAKPE 117 (231)
T ss_dssp CGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCC
T ss_pred CcccCceEEEEEEecCCCceEEEEEEEEEecCC
Confidence 9999999999999987 7888888999987653
No 362
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.70 E-value=1.6e-08 Score=83.49 Aligned_cols=70 Identities=14% Similarity=0.218 Sum_probs=52.5
Q ss_pred eeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCCc
Q psy12695 156 TAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG 234 (369)
Q Consensus 156 ~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g 234 (369)
.+.+|+.++|.|.+.+. .+.+.|++++..+.... ...........+.|.|.+++.+|+|.|+|.|.|..+
T Consensus 110 ~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~--------~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 110 LVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLC--------LRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGS--------EEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred eecCCCeEEEEEecCCC-CCEEEEEeCCCccccee--------ecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 67899999999999884 56899999986543211 111111223457899999999999999999999876
No 363
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.70 E-value=4.9e-08 Score=72.89 Aligned_cols=81 Identities=20% Similarity=0.304 Sum_probs=55.6
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCe-----EeeecccccccCCcceEEEE--eecceeeEEEcccCCCCC
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKEK-----IIANISSGLANMNKRQYIIK--TINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~I~~v~~~D~ 222 (369)
..+..+.+.+|++++|.|.+.+.+.+.+.|+++.. .+.............++.+. .......|.|.+++.+|+
T Consensus 5 q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~Ds 84 (112)
T 2z35_A 5 QTGGQVALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESDS 84 (112)
T ss_dssp CSCSEEEEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTC
T ss_pred eCCCcEEEcCCCCEEEEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhhC
Confidence 45677889999999999999887778899998531 12111111100112345443 223456899999999999
Q ss_pred EEEEEEEE
Q psy12695 223 GIYTCRAK 230 (369)
Q Consensus 223 G~Y~C~a~ 230 (369)
|.|.|.+.
T Consensus 85 G~Y~C~~~ 92 (112)
T 2z35_A 85 AVYYCALS 92 (112)
T ss_dssp SEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999987
No 364
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.70 E-value=5e-08 Score=84.77 Aligned_cols=101 Identities=13% Similarity=0.174 Sum_probs=68.4
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCC------CCeEEEEeCC--eE---eeecccccccCCcceEEEEeecceeeEEEc
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSP------VPKIKWIFKE--KI---IANISSGLANMNKRQYIIKTINSLSNLTIV 215 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p------~p~i~W~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 215 (369)
.+...|..+.+.+|++++|.|.+.+.| .+.+.|+++. .. +.............++.+........|.|.
T Consensus 7 ~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~ 86 (264)
T 2gjj_A 7 VLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIG 86 (264)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEES
T ss_pred ceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEEC
Confidence 344557788999999999999999887 6789999852 21 111110000011235555444556789999
Q ss_pred ccCCCCCEEEEEEEEeCCceE-EEEEEEEEeec
Q psy12695 216 AVTMSDSGIYTCRAKNGAGEV-FTNISLNVIKV 247 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~~g~~-~~~~~l~v~~~ 247 (369)
+++.+|+|.|.|.+.|..+.. ...+.|.|...
T Consensus 87 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~ 119 (264)
T 2gjj_A 87 SVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRG 119 (264)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEECC
T ss_pred CCCHHHCEEEEEEEecCCccEecCCEEEEEEcC
Confidence 999999999999999876532 23356777654
No 365
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.70 E-value=1.4e-08 Score=91.40 Aligned_cols=95 Identities=19% Similarity=0.195 Sum_probs=74.2
Q ss_pred CCccCCCCCeeeccCCeEEEEEEee-------CCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccC
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRAT-------GSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVT 218 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~-------g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 218 (369)
|.+...+.++.+.+|+.+.|.|.+. +.|.+.+.|++++..+..... ...++.. ..+.|.|.+++
T Consensus 19 p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~-----~~~~~~~----~~~~L~i~~v~ 89 (339)
T 3o4o_C 19 RFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGE-----EETRMWA----QDGALWLLPAL 89 (339)
T ss_dssp EEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCC-----SSSCEEE----ETTEEEESSBC
T ss_pred HhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCcc-----ccccEEe----eCCeEEECCCC
Confidence 4555667889999999999999998 899999999998865321110 0112211 24589999999
Q ss_pred CCCCEEEEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 219 MSDSGIYTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 219 ~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
.+|+|.|.|.+.|..|.....+.|.|...+.
T Consensus 90 ~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~ 120 (339)
T 3o4o_C 90 QEDSGTYVCTTRNASYCDKMSIELRVFENTD 120 (339)
T ss_dssp TTCCEEEECCEEETTEEEEEEEEEEEECSCG
T ss_pred cccCEEEEEEEECCcceEEEEEEEEEEcCCC
Confidence 9999999999999999988889999987654
No 366
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.69 E-value=9.5e-08 Score=71.95 Aligned_cols=97 Identities=21% Similarity=0.233 Sum_probs=62.4
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCC-CCeEEEEeCC--e---Eeeecccc-cccCCcceEEEEe--ecceeeEEEcccCCC
Q psy12695 150 PITPDVTAEENENVTLSCRATGSP-VPKIKWIFKE--K---IIANISSG-LANMNKRQYIIKT--INSLSNLTIVAVTMS 220 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p-~p~i~W~~~~--~---~~~~~~~~-~~~~~~~~~~~~~--~~~~~~L~I~~v~~~ 220 (369)
..|..+.+.+|++++|.|.+.+.. ...+.|+++. . .+...... .......+|.+.. ......|.|.+++.+
T Consensus 4 q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~ 83 (117)
T 3bp6_A 4 FYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRN 83 (117)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCGG
T ss_pred ecCCcEEEeCCCCEEEEeEeecCCCCCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcCCHH
Confidence 346678899999999999997654 4679999852 2 11111111 0111234565533 345568999999999
Q ss_pred CCEEEEEEEEeCCce----EEEEEEEEEee
Q psy12695 221 DSGIYTCRAKNGAGE----VFTNISLNVIK 246 (369)
Q Consensus 221 D~G~Y~C~a~n~~g~----~~~~~~l~v~~ 246 (369)
|+|.|.|.+.+..+. ....+.|.|..
T Consensus 84 Dsg~Y~C~~~~~~~~~~~~~~~~t~L~V~~ 113 (117)
T 3bp6_A 84 DSGIYLCGAISLHPKLKIEESPGAELVVTE 113 (117)
T ss_dssp GCEEEEEEEEECSSSCEEEECCCEEEEEC-
T ss_pred HCEEEEEEEEecCCccccccCCcEEEEEEh
Confidence 999999999875532 12345565543
No 367
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.69 E-value=4.8e-08 Score=73.48 Aligned_cols=82 Identities=18% Similarity=0.299 Sum_probs=56.6
Q ss_pred CCCCCeeeccCCeEEEEEEeeCC-CCCeEEEEeCC--e---Eeeecc-cccccCCcceEEEE--eecceeeEEEcccCCC
Q psy12695 150 PITPDVTAEENENVTLSCRATGS-PVPKIKWIFKE--K---IIANIS-SGLANMNKRQYIIK--TINSLSNLTIVAVTMS 220 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~--~---~~~~~~-~~~~~~~~~~~~~~--~~~~~~~L~I~~v~~~ 220 (369)
..|..+.+.+|++++|.|.+.+. +.+.+.|+++. . .+.... .........++.+. .......|+|.+++.+
T Consensus 5 q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~ 84 (116)
T 1fo0_A 5 QTQTSISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIE 84 (116)
T ss_dssp CCCCEEEEETTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCGG
T ss_pred cCCCcEEEecCCcEEEEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCChh
Confidence 44677899999999999999876 55689999853 1 111111 11111123455553 3345668999999999
Q ss_pred CCEEEEEEEEe
Q psy12695 221 DSGIYTCRAKN 231 (369)
Q Consensus 221 D~G~Y~C~a~n 231 (369)
|+|.|.|.+.+
T Consensus 85 DsG~Y~C~~~~ 95 (116)
T 1fo0_A 85 DSAVYFCAMRG 95 (116)
T ss_dssp GCEEEEEEEEC
T ss_pred hCEEEEEEEEc
Confidence 99999999987
No 368
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.69 E-value=6.6e-08 Score=72.68 Aligned_cols=83 Identities=19% Similarity=0.304 Sum_probs=56.7
Q ss_pred CCCCCeeeccCCeEEEEEEeeCC-CCCeEEEEeCC--e---Eeeecccccc---cCCcceEEEEe--ecceeeEEEcccC
Q psy12695 150 PITPDVTAEENENVTLSCRATGS-PVPKIKWIFKE--K---IIANISSGLA---NMNKRQYIIKT--INSLSNLTIVAVT 218 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~--~---~~~~~~~~~~---~~~~~~~~~~~--~~~~~~L~I~~v~ 218 (369)
..|..+.+.+|++++|.|.+.+. +.+.+.|++.. . .+........ .....++.+.. ......|+|.+++
T Consensus 5 q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 84 (116)
T 1tvd_A 5 QSSPDQTVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPVR 84 (116)
T ss_dssp CCSCCEEEETTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSCC
T ss_pred cCCCcEEEecCCeEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccCC
Confidence 45678899999999999999764 55679999853 1 1211111100 01134555443 3455689999999
Q ss_pred CCCCEEEEEEEEeC
Q psy12695 219 MSDSGIYTCRAKNG 232 (369)
Q Consensus 219 ~~D~G~Y~C~a~n~ 232 (369)
.+|+|.|.|.+.+.
T Consensus 85 ~~DsG~Y~C~~~~~ 98 (116)
T 1tvd_A 85 TEDSATYYCAFTLP 98 (116)
T ss_dssp GGGCEEEEEEEECT
T ss_pred hHHCEEEEEEEeCC
Confidence 99999999999874
No 369
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.69 E-value=7.8e-08 Score=92.00 Aligned_cols=99 Identities=18% Similarity=0.292 Sum_probs=72.6
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCe-EEEEeCCeEe--eecccccccCCcceEEEEeecceeeEEEcccCCCCC
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPK-IKWIFKEKII--ANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~-i~W~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 222 (369)
|.+...+....+.+|+.+.|.|.+.|.|.|. +.|++++..+ ......... ... .....+.|.|.+++.+|+
T Consensus 212 p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~L~I~~~~~~D~ 285 (524)
T 2ec8_A 212 PVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHH-GDF-----NYERQATLTISSARVNDS 285 (524)
T ss_dssp CEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEEC-SSS-----CEEEEEEEEESSCCTTTC
T ss_pred CcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccc-cCC-----ccceEEEEEECCCCHHHC
Confidence 3333445566789999999999999999887 9999998762 111000000 000 112357899999999999
Q ss_pred EEEEEEEEeCCceEEEEEEEEEeecCCc
Q psy12695 223 GIYTCRAKNGAGEVFTNISLNVIKVETA 250 (369)
Q Consensus 223 G~Y~C~a~n~~g~~~~~~~l~v~~~~~~ 250 (369)
|.|.|.|.|..|.....+.|.|...+..
T Consensus 286 G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 313 (524)
T 2ec8_A 286 GVFMCYANNTFGSANVTTTLEVVDKGFI 313 (524)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEESSCEE
T ss_pred EEEEEEEEecCCceEEEEEEEEeccCce
Confidence 9999999999999988999999876543
No 370
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.69 E-value=3.5e-08 Score=75.28 Aligned_cols=80 Identities=19% Similarity=0.250 Sum_probs=55.7
Q ss_pred cCCCCCeeeccCCeEEEEEEeeCC--CCCeEEEEeC--CeEeeecccccccCCcceEEEEe--ecceeeEEEcccCCCCC
Q psy12695 149 RPITPDVTAEENENVTLSCRATGS--PVPKIKWIFK--EKIIANISSGLANMNKRQYIIKT--INSLSNLTIVAVTMSDS 222 (369)
Q Consensus 149 ~~~~~~~~~~~G~~~~l~C~~~g~--p~p~i~W~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~~D~ 222 (369)
.+.|..+.+.+|++++|.|.+.+. +.+.+.|+++ +...... .....++.... ......|+|.+++.+|+
T Consensus 4 ~Q~p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l-----i~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 78 (126)
T 3moq_A 4 DQTPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQS-----ISIGGRYVETVNKGSKSFSLRISDLRVEDS 78 (126)
T ss_dssp EEECSEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEE-----CCCBTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EECCceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEE-----EEeCCcEEEEEeCCCCEEEEEECcCChHhC
Confidence 345677899999999999999875 5667999984 2211000 00122443332 23467899999999999
Q ss_pred EEEEEEEEeCC
Q psy12695 223 GIYTCRAKNGA 233 (369)
Q Consensus 223 G~Y~C~a~n~~ 233 (369)
|.|.|.+.+..
T Consensus 79 G~Y~C~~~~~~ 89 (126)
T 3moq_A 79 GTYKCQAFYVF 89 (126)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEEEEEEEcC
Confidence 99999998754
No 371
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.69 E-value=6.2e-08 Score=79.47 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=62.6
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...|.. .+.+|++++|.|.+.+. .+.+.|++++..+....... ......+.|.|.+++.+|+|.|
T Consensus 5 P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~----------~~~~~~~~L~I~~v~~~D~G~Y 72 (188)
T 1oll_A 5 PFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKP----------PERINKVKFYIPDMNSRMAGQY 72 (188)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECCSS----------CTTCCEEEEEESSCCGGGCEEE
T ss_pred CEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCccccccccc----------CCCcceeEEEeCcCCcccCeEE
Confidence 344444555 78999999999999764 46899999987654211100 0112356899999999999999
Q ss_pred EEEEEeCCceE--EEEEEEEEee
Q psy12695 226 TCRAKNGAGEV--FTNISLNVIK 246 (369)
Q Consensus 226 ~C~a~n~~g~~--~~~~~l~v~~ 246 (369)
.|.+.|..|.. +..+.|.|..
T Consensus 73 ~C~~~~~~~~~~~s~~~~l~V~~ 95 (188)
T 1oll_A 73 SCIYRVGELWSEPSNLLDLVVTE 95 (188)
T ss_dssp EEEEEETTEECCCCCCEEEEEES
T ss_pred EEEecCCCCCCCCCCceEEEecc
Confidence 99999876532 4456677764
No 372
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.68 E-value=2.3e-08 Score=85.83 Aligned_cols=99 Identities=15% Similarity=0.200 Sum_probs=67.1
Q ss_pred CCCCeeeccCCeEEEEEEeeCCCCCe-----EEEEeCCeEee------ecccccc--cCCcceEE-EEeecceeeEEEcc
Q psy12695 151 ITPDVTAEENENVTLSCRATGSPVPK-----IKWIFKEKIIA------NISSGLA--NMNKRQYI-IKTINSLSNLTIVA 216 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p~p~-----i~W~~~~~~~~------~~~~~~~--~~~~~~~~-~~~~~~~~~L~I~~ 216 (369)
.+..+.+.+|+.++|.|.+.|.|.+. +.|++++.... ....... ..+..++. .....+...|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 35567899999999999999988876 99998642110 0000000 00000000 00112345699999
Q ss_pred cCCCCCEEEEEEEEeCCceEEEEEEEEEeecCC
Q psy12695 217 VTMSDSGIYTCRAKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 217 v~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 249 (369)
++.+|+|.|+|.+.|..+.....+.|.|...|.
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~ 121 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPA 121 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCE
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEecCCc
Confidence 999999999999999999888889999987554
No 373
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.68 E-value=5e-08 Score=84.24 Aligned_cols=100 Identities=19% Similarity=0.268 Sum_probs=66.3
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--e---Eeeec-ccccccCCcceEEE--EeecceeeEEEcccC
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--K---IIANI-SSGLANMNKRQYII--KTINSLSNLTIVAVT 218 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~---~~~~~-~~~~~~~~~~~~~~--~~~~~~~~L~I~~v~ 218 (369)
.+...+..+.+.+|++++|.|.+.+.|.+.+.|++.. . .+... ..........++.. ........|.|.+++
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 84 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH 84 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC
Confidence 3455677889999999999999999999999999843 1 11111 00000011223333 223456789999999
Q ss_pred CCCCEEEEEEEEeCCce----EEEEEEEEEee
Q psy12695 219 MSDSGIYTCRAKNGAGE----VFTNISLNVIK 246 (369)
Q Consensus 219 ~~D~G~Y~C~a~n~~g~----~~~~~~l~v~~ 246 (369)
.+|+|.|.|.+.|..+. ....+.|.|..
T Consensus 85 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (256)
T 3tf7_C 85 RSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSP 116 (256)
T ss_dssp GGGCSEEEEEEECTTCTTCEEECCCEEEEEEC
T ss_pred cccCEEEEEEEecCCCccceEECCCeEEEEeC
Confidence 99999999999987642 22335666664
No 374
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=98.68 E-value=2.9e-08 Score=85.55 Aligned_cols=81 Identities=23% Similarity=0.373 Sum_probs=65.3
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCC-eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVP-KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|++++..+.. ....|.|.+++.+|+|.
T Consensus 2 P~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~-------------------~~~~l~i~~~~~~d~G~ 62 (262)
T 3rjd_A 2 AVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQT-------------------STPSYRITSASVNDSGE 62 (262)
T ss_dssp CEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSC-------------------CSSEEEESSCCGGGCEE
T ss_pred CeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeec-------------------cCCeEEEecCCcccCeE
Confidence 555666778899999999999999999988 8999999876532 14579999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeec
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~ 247 (369)
|.|.+.|..+.. .+.+.|...
T Consensus 63 Y~C~~~~~~~s~--~~~l~v~~~ 83 (262)
T 3rjd_A 63 YRCQRGLSGRSD--PIQLEIHRG 83 (262)
T ss_dssp EEEEESSSCCCC--CEEEEEECS
T ss_pred EEEEEecCCccc--cEEEEEecc
Confidence 999999877654 455555544
No 375
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.68 E-value=1.4e-08 Score=84.13 Aligned_cols=89 Identities=18% Similarity=0.256 Sum_probs=63.7
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...|. ..+.+|+.++|.|.+.+.|. .+.|++++..+....... ......+.|.|.+++.+|+|.|
T Consensus 6 P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~----------~~~~~~~~L~i~~v~~~D~G~Y 73 (198)
T 1ugn_A 6 PTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIP----------QELVKKGQFPIPSITWEHTGRY 73 (198)
T ss_dssp CEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSC----------HHHHTTTEEEESSCCGGGCEEE
T ss_pred CeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCcccccccccc----------ccCCcccEEEECCCCHHHCeEE
Confidence 34444444 47899999999999998876 799999987553211000 0012346799999999999999
Q ss_pred EEEEEeCC-c--eEEEEEEEEEee
Q psy12695 226 TCRAKNGA-G--EVFTNISLNVIK 246 (369)
Q Consensus 226 ~C~a~n~~-g--~~~~~~~l~v~~ 246 (369)
.|.+.|.. | ..+..+.|.|..
T Consensus 74 ~C~a~n~~~g~~~~s~~~~l~V~~ 97 (198)
T 1ugn_A 74 RCYYGSDTAGRSESSDPLELVVTG 97 (198)
T ss_dssp EEEEEETTTEECCCCCCEEEEEEC
T ss_pred EEEEECCCCCcccCCccEEEEEcc
Confidence 99999987 5 335567777776
No 376
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.68 E-value=4.7e-08 Score=85.06 Aligned_cols=102 Identities=14% Similarity=0.209 Sum_probs=66.3
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCC-----CCeEEEEeCC--e---EeeecccccccCCcceEEEEeecceeeEEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSP-----VPKIKWIFKE--K---IIANISSGLANMNKRQYIIKTINSLSNLTI 214 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p-----~p~i~W~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I 214 (369)
.+.+...|..+.+.+|++++|.|.+.+.+ .+.+.|+++. . .+.............++.+........|.|
T Consensus 15 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I 94 (268)
T 1x9q_A 15 DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKI 94 (268)
T ss_dssp CCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEE
Confidence 34455557788899999999999998887 4789999853 1 121111100001123555544455678999
Q ss_pred cccCCCCCEEEEEEEEeCCceE-EEEEEEEEee
Q psy12695 215 VAVTMSDSGIYTCRAKNGAGEV-FTNISLNVIK 246 (369)
Q Consensus 215 ~~v~~~D~G~Y~C~a~n~~g~~-~~~~~l~v~~ 246 (369)
.+++.+|+|.|.|.+.|..+.. ...+.|.|..
T Consensus 95 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~ 127 (268)
T 1x9q_A 95 NRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKS 127 (268)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEC---
T ss_pred CCCChhHCEEEEEEEecCCCceEcCCEEEEEcc
Confidence 9999999999999999875532 2334555554
No 377
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.68 E-value=2.2e-08 Score=88.95 Aligned_cols=89 Identities=20% Similarity=0.240 Sum_probs=67.3
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCC-CCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGS-PVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
|.+. .+.+..+.+|+.+.|.|.+.+. |.+.+.|++++..+..... +. ...+...|.|.+++.+|+|.
T Consensus 8 P~~~-~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~---------~~--~~~~~~~L~i~~~~~~d~G~ 75 (317)
T 2y25_A 8 PHFV-EYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEK---------HD--FKDGICTLLITEFSKKDAGI 75 (317)
T ss_dssp CEEE-EEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC----------------CCEEEEETTCCSTTCSC
T ss_pred CcEe-eeeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCc---------EE--EECCeEEEEEccCCcccCeE
Confidence 4444 3345889999999999999887 7789999999987653211 11 11345689999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEee
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~ 246 (369)
|.|.+.|..|.....+.|.|..
T Consensus 76 Y~C~~~n~~g~~~~~~~l~v~~ 97 (317)
T 2y25_A 76 YEVILKDDRGKDKSRLKLVDEA 97 (317)
T ss_dssp EEEEEESSSCEEEEEECCSTHH
T ss_pred EEEEEECCCCcEEEEEEEEEec
Confidence 9999999999887776665543
No 378
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.68 E-value=3.2e-08 Score=83.40 Aligned_cols=89 Identities=13% Similarity=0.169 Sum_probs=62.0
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeeccee--eEEEcccCCCCCE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLS--NLTIVAVTMSDSG 223 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~L~I~~v~~~D~G 223 (369)
|.+...|. ..+.+|++++|.|.+.+ +.+.+.|++++..+..... . ........ .|.|.+++.+|+|
T Consensus 10 P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~--------~--~~~~~~~~~~~L~I~~v~~~D~G 77 (218)
T 1uct_A 10 PFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIG--------R--RLKFWNETDPEFVIDHMDANKAG 77 (218)
T ss_dssp CCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECS--------E--ECC----CCCEEEECSCCGGGCE
T ss_pred CEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccccc--------c--cCCCCcceeeEEEEcccccccCE
Confidence 44544444 57899999999999987 6789999998765432110 0 00011234 8999999999999
Q ss_pred EEEEEEEeCCceE--EEEEEEEEee
Q psy12695 224 IYTCRAKNGAGEV--FTNISLNVIK 246 (369)
Q Consensus 224 ~Y~C~a~n~~g~~--~~~~~l~v~~ 246 (369)
.|.|.+.|..|.. +..+.|.|..
T Consensus 78 ~Y~C~a~n~~~~~~~s~~~~l~V~~ 102 (218)
T 1uct_A 78 RYQCQYRIGHYRFRYSDTLELVVTG 102 (218)
T ss_dssp EEEEEEEETTTEEEECCCEEEEEEC
T ss_pred EEEEEEEcCCCceeecCCEEEEEcC
Confidence 9999999987643 3446777765
No 379
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.68 E-value=1.3e-07 Score=81.59 Aligned_cols=102 Identities=20% Similarity=0.241 Sum_probs=67.9
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCC-eEEEEeC--CeEe---eecccccccCCcceEEEEeecceeeEEEcccCC
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVP-KIKWIFK--EKII---ANISSGLANMNKRQYIIKTINSLSNLTIVAVTM 219 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p-~i~W~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 219 (369)
+.+...+....+.+|++++|.|.+.+.+.+ .+.|+++ +... .............++..........|.|.+++.
T Consensus 142 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 221 (257)
T 3gkz_A 142 IVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEA 221 (257)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred eEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCCh
Confidence 444555667889999999999999998888 8999984 2211 111110001112345554455567899999999
Q ss_pred CCCEEEEEEEEeCCceEEEE-EEEEEeec
Q psy12695 220 SDSGIYTCRAKNGAGEVFTN-ISLNVIKV 247 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~g~~~~~-~~l~v~~~ 247 (369)
+|+|.|.|.+.+........ ..|.|...
T Consensus 222 ~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~ 250 (257)
T 3gkz_A 222 EDAASYFCHQWSSFPFTFGSGTKLEIKRA 250 (257)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEECCC
T ss_pred HHCEEEEEEEccCCceEEcCCEEEEEEeC
Confidence 99999999998865544433 45555543
No 380
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=98.68 E-value=9.8e-08 Score=92.53 Aligned_cols=108 Identities=17% Similarity=0.245 Sum_probs=74.5
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeE----EEEe--CCe--EeeecccccccCCcceEEEEe--ecceeeEEEc
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKI----KWIF--KEK--IIANISSGLANMNKRQYIIKT--INSLSNLTIV 215 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i----~W~~--~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~ 215 (369)
|.+...+..+.+.+|+.+.|.|.+.|.|.|.+ .|++ ++. .+.............++.+.. ..+...|.|.
T Consensus 332 p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~ 411 (585)
T 2ocw_A 332 STIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILN 411 (585)
T ss_pred cccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEEC
Confidence 44444567788899999999999999999987 7998 775 443221110011112232221 1223459999
Q ss_pred ccCCCCCEEEEEEEEeCCceEEEEEEEEEeecCCcccCC
Q psy12695 216 AVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQP 254 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~ 254 (369)
+++.+|+|.|+|.| |..|.....+.|.|...++....+
T Consensus 412 ~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~ 449 (585)
T 2ocw_A 412 QLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVP 449 (585)
T ss_pred CCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccC
Confidence 99999999999999 999998889999998765444333
No 381
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.67 E-value=4.1e-08 Score=89.95 Aligned_cols=98 Identities=19% Similarity=0.435 Sum_probs=69.9
Q ss_pred CCccCCCCC-eeeccCCeEEEEEEeeCCCCCeEEEEe-CCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCC--
Q psy12695 146 PNIRPITPD-VTAEENENVTLSCRATGSPVPKIKWIF-KEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSD-- 221 (369)
Q Consensus 146 p~i~~~~~~-~~~~~G~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D-- 221 (369)
|.+...|.. +.+.+|+.++|.|.+.|.|.|.+.|++ ++..+..... .+. ....+.|.|.+++.+|
T Consensus 4 P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~-------~~~----~~~~~~L~i~~~~~~d~~ 72 (388)
T 2v5m_A 4 PVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPG-------LRQ----ISSDGKLVFPPFRAEDYR 72 (388)
T ss_dssp EEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTT-------TBE----ECSTTEEEECCCCGGGCC
T ss_pred CchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCC-------ceE----EcCCceEEecccChhhcc
Confidence 444444544 567899999999999999999999999 5654432111 011 1234679999999987
Q ss_pred ----CEEEEEEEEeCCceE-EEEEEEEEeecCCcccCC
Q psy12695 222 ----SGIYTCRAKNGAGEV-FTNISLNVIKVETAVAQP 254 (369)
Q Consensus 222 ----~G~Y~C~a~n~~g~~-~~~~~l~v~~~~~~~~~~ 254 (369)
+|.|+|.|.|..|.. +..+.+.+...+.....+
T Consensus 73 ~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~ 110 (388)
T 2v5m_A 73 QEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADV 110 (388)
T ss_dssp HHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBC
T ss_pred ccccCceEEEEEEccCCeEEecceEEEEccccccccCc
Confidence 999999999999874 456777777665544333
No 382
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.67 E-value=1.5e-08 Score=94.90 Aligned_cols=72 Identities=32% Similarity=0.493 Sum_probs=60.3
Q ss_pred CCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeC
Q psy12695 153 PDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 232 (369)
.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+... +..+ .++.+|+|.|+|.|.|.
T Consensus 378 ~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~-------------------g~~~---~v~~~d~G~Y~C~a~N~ 435 (450)
T 1z7z_I 378 GNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPI-------------------GESV---TVTRDLEGTYLCRARST 435 (450)
T ss_dssp SEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCT-------------------TSCE---ECCGGGCEEEEEEEEET
T ss_pred CceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCC-------------------CCeE---eEehhhCeEEEEEEEeC
Confidence 5678999999999999999999999999998733210 1112 57889999999999999
Q ss_pred CceEEEEEEEEEee
Q psy12695 233 AGEVFTNISLNVIK 246 (369)
Q Consensus 233 ~g~~~~~~~l~v~~ 246 (369)
.|.....+.|.|..
T Consensus 436 ~G~~~~~~~l~V~~ 449 (450)
T 1z7z_I 436 QGEVTREVTVNVLS 449 (450)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCceeEEEEEEEEc
Confidence 99999999998865
No 383
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.67 E-value=4.9e-08 Score=73.06 Aligned_cols=78 Identities=21% Similarity=0.294 Sum_probs=54.9
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCC--CCeEEEEeCC--eEeeecccccccCCcceEEEEe--ecceeeEEEcccCCCCCE
Q psy12695 150 PITPDVTAEENENVTLSCRATGSP--VPKIKWIFKE--KIIANISSGLANMNKRQYIIKT--INSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~~D~G 223 (369)
..|..+.+.+|++++|.|.+.+.+ .+.+.|+++. ...... .....++.... ......|+|.+++.+|+|
T Consensus 5 q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~-----~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG 79 (113)
T 1sq2_N 5 QTPRSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEES-----ISKGGRYVETVNSGSKSFSLRINDLTVEDGG 79 (113)
T ss_dssp EECSEEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEE-----CCCBTTEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred eCCccEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEe-----EEeCCCEEEEEeCCCCEEEEEECCCChhhCE
Confidence 346778899999999999998765 5689999853 211100 01122444332 234678999999999999
Q ss_pred EEEEEEEeC
Q psy12695 224 IYTCRAKNG 232 (369)
Q Consensus 224 ~Y~C~a~n~ 232 (369)
.|.|.+.+.
T Consensus 80 ~Y~C~~~~~ 88 (113)
T 1sq2_N 80 TYRCGLGVA 88 (113)
T ss_dssp EEEEEECBT
T ss_pred EEEEEEEeC
Confidence 999999873
No 384
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.67 E-value=1.4e-07 Score=83.24 Aligned_cols=101 Identities=17% Similarity=0.238 Sum_probs=66.9
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCC------eEEEEeCC--eE---eeecccccccCCcceEEEEeecceeeEEEc
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVP------KIKWIFKE--KI---IANISSGLANMNKRQYIIKTINSLSNLTIV 215 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p------~i~W~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 215 (369)
.+...+..+.+.+|++++|.|.+.+.+.+ .+.|+++. .. +.............++..........|.|.
T Consensus 161 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 240 (291)
T 2gki_A 161 VMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTIS 240 (291)
T ss_dssp CEECSCSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred eEEcCCCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEEC
Confidence 34445667889999999999999998876 89999963 21 111111000011234554444456789999
Q ss_pred ccCCCCCEEEEEEEEeCCceEEEE-EEEEEeec
Q psy12695 216 AVTMSDSGIYTCRAKNGAGEVFTN-ISLNVIKV 247 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~~g~~~~~-~~l~v~~~ 247 (369)
+++.+|+|.|+|.+.|.....+.. ..|.|...
T Consensus 241 ~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~v~~~ 273 (291)
T 2gki_A 241 SVQAEDLAVYYCKQSYYHMYTFGSGTKLEIKHH 273 (291)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEEECC
T ss_pred CCCHHHCEEEEEEEccCCceEEcCCEEEEEEee
Confidence 999999999999999976544443 34555443
No 385
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.67 E-value=9e-08 Score=91.53 Aligned_cols=96 Identities=17% Similarity=0.251 Sum_probs=66.2
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCe--E---eeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKEK--I---IANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
..|..+.+.+|+.+.|.|.+.|.|.+.+.|++++. . +.............++..........|.|.+++.+|+|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 84 (523)
T 2rcj_C 5 TQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESD 84 (523)
T ss_pred ccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEE
Confidence 44678899999999999999999999999999641 1 111000000011234443333456689999999999999
Q ss_pred EEEEEEeCCce---EEEEEEEEEe
Q psy12695 225 YTCRAKNGAGE---VFTNISLNVI 245 (369)
Q Consensus 225 Y~C~a~n~~g~---~~~~~~l~v~ 245 (369)
|.|.|.|..|. ....+.|.|.
T Consensus 85 Y~C~a~n~~g~~~~~~~~~~l~V~ 108 (523)
T 2rcj_C 85 YYCASWNSSDNSYVFGTGTKVTVL 108 (523)
T ss_pred EEEEEccCCCccccccCceEEEec
Confidence 99999998763 2344667774
No 386
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.67 E-value=1e-07 Score=85.52 Aligned_cols=87 Identities=21% Similarity=0.270 Sum_probs=66.2
Q ss_pred CCCCeeeccCCeEEEEEEeeCCC---CC-eEEEEeCCeEeeecccccccCCcceEEE---EeecceeeEEEcccCCCCCE
Q psy12695 151 ITPDVTAEENENVTLSCRATGSP---VP-KIKWIFKEKIIANISSGLANMNKRQYII---KTINSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p---~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~I~~v~~~D~G 223 (369)
.+....+.+|+.+.|.|.+.|.| .| .+.|++++..+..... ..+.. ......+.|.|.+++.+|+|
T Consensus 234 ~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~-------~~~~~~~~~~~~~~~~L~I~~v~~~D~G 306 (329)
T 3oq3_B 234 LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDF-------GVYSILTSSGGITEATLYFENVTEEYIG 306 (329)
T ss_dssp CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCS-------SEEEEEEEETTEEEEEEEESSCCGGGTT
T ss_pred cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCC-------ceeeeecccCceeEeEEEEEeccHHHCC
Confidence 34557889999999999999998 77 8899999876432111 11110 00113578999999999999
Q ss_pred -EEEEEEEeCCceEEEEEEEEE
Q psy12695 224 -IYTCRAKNGAGEVFTNISLNV 244 (369)
Q Consensus 224 -~Y~C~a~n~~g~~~~~~~l~v 244 (369)
.|+|.|.|..|.....+.|.|
T Consensus 307 ~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 307 NTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp CEEEEEEECSSCEEEEEEEEEE
T ss_pred CcEEEEEEecCCceEEEEEEEe
Confidence 999999999999988888776
No 387
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.66 E-value=2e-08 Score=90.12 Aligned_cols=87 Identities=25% Similarity=0.392 Sum_probs=68.7
Q ss_pred CeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCC
Q psy12695 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGA 233 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 233 (369)
...+.+|+.+.|.|.+.|.|.+.+.|++++..+....... ..........|.|.+++.+|+|.|.|.+.|..
T Consensus 132 ~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~--------~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 203 (334)
T 1ry7_B 132 LLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIG--------GIKLRHQQWSLVMESVVPSDRGNYTCVVENKF 203 (334)
T ss_dssp EEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTT--------CCCCCTTTTEEEECSCCGGGCCCEEEEEEETT
T ss_pred eEEecCCCcEEEEEEccCCCCCeEEEEECCEECccccccc--------ceecccceEEEEECCCCcccCEEEEEEEEeCC
Confidence 4678899999999999999999999999987664322110 00112235689999999999999999999999
Q ss_pred ceEEEEEEEEEeecC
Q psy12695 234 GEVFTNISLNVIKVE 248 (369)
Q Consensus 234 g~~~~~~~l~v~~~~ 248 (369)
|.....+.|.|...+
T Consensus 204 g~~~~~~~l~V~~~~ 218 (334)
T 1ry7_B 204 GSIRQTYTLDVLERS 218 (334)
T ss_dssp EEEEEEEEEEEECCC
T ss_pred CCEEEEEEEEEecCC
Confidence 999888999987643
No 388
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=98.66 E-value=7.4e-08 Score=83.00 Aligned_cols=80 Identities=24% Similarity=0.302 Sum_probs=66.7
Q ss_pred CCCCeeeccCCeEEEEEEe-eCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEE
Q psy12695 151 ITPDVTAEENENVTLSCRA-TGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRA 229 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 229 (369)
.+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .....|.|.+++.+|+|.|.|.+
T Consensus 88 ~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~-----------------~~~~~l~i~~~~~~d~G~Y~C~~ 150 (262)
T 3rjd_A 88 QVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF-----------------HWNSNLTILKTNISHNGTYHCSG 150 (262)
T ss_dssp EESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE-----------------EECCCEEESSCCGGGCEEEEEEE
T ss_pred cCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc-----------------CCCCeEEEEECChhhCEEEEEEE
Confidence 3455678899999999999 78888899999998766421 12467999999999999999999
Q ss_pred EeCCceEEEEEEEEEeec
Q psy12695 230 KNGAGEVFTNISLNVIKV 247 (369)
Q Consensus 230 ~n~~g~~~~~~~l~v~~~ 247 (369)
.|..+..+..+.|.|...
T Consensus 151 ~n~~~~~~~~~~l~V~~~ 168 (262)
T 3rjd_A 151 MGKHRYTSAGISVTVKEL 168 (262)
T ss_dssp ESSSEEEEECEEEEEECS
T ss_pred eCCCCccccceEEEeccC
Confidence 999988888888888764
No 389
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.66 E-value=4.6e-08 Score=72.55 Aligned_cols=77 Identities=21% Similarity=0.321 Sum_probs=54.0
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCC--CCeEEEEeCC--eEeeecccccccCCcceEEEEe--ecceeeEEEcccCCCCCE
Q psy12695 150 PITPDVTAEENENVTLSCRATGSP--VPKIKWIFKE--KIIANISSGLANMNKRQYIIKT--INSLSNLTIVAVTMSDSG 223 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~~D~G 223 (369)
..|..+.+.+|++++|.|.+.+.+ .+.+.|+++. ...... .....++.... ......|.|.+++.+|+|
T Consensus 5 q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~-----~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG 79 (108)
T 2coq_A 5 QTPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQT-----ISIGGRYSETVDEGSNSASLTIRDLRVEDSG 79 (108)
T ss_dssp EECSEEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEE-----CCCBTTEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred eCCceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEE-----EEeCCceEEEEcCCCCEEEEEECCCCcccCE
Confidence 346778899999999999998764 5679999863 211000 00122443322 234678999999999999
Q ss_pred EEEEEEEe
Q psy12695 224 IYTCRAKN 231 (369)
Q Consensus 224 ~Y~C~a~n 231 (369)
.|.|.+.+
T Consensus 80 ~Y~C~~~~ 87 (108)
T 2coq_A 80 TYKCKAYR 87 (108)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 99999987
No 390
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.66 E-value=1.1e-07 Score=79.85 Aligned_cols=86 Identities=12% Similarity=0.261 Sum_probs=57.7
Q ss_pred eeccCCeEEEEEEeeCCCCCeEEEEeC-CeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCCc
Q psy12695 156 TAEENENVTLSCRATGSPVPKIKWIFK-EKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG 234 (369)
Q Consensus 156 ~~~~G~~~~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g 234 (369)
.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+........... .........+..+..+|.|.|+|.|.|..|
T Consensus 127 ~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g 199 (222)
T 3sbw_C 127 VDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKR-------EEKLFNVTSTLRINTTTNEIFYCTFRRLDP 199 (222)
T ss_dssp EETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC-----------CEEEEEEEEEECCTTCEEEEEEEETTT
T ss_pred eecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcC-------CCCCEEEEEEEEEeccCCcEEEEEEEeCcc
Confidence 567899999999999999999999998 433322110000000 000011122224567899999999999999
Q ss_pred eEEEEEEEEEeecC
Q psy12695 235 EVFTNISLNVIKVE 248 (369)
Q Consensus 235 ~~~~~~~l~v~~~~ 248 (369)
.....+.|.|...+
T Consensus 200 ~~~~~~~l~v~~~p 213 (222)
T 3sbw_C 200 EENHTAELVIPELP 213 (222)
T ss_dssp TEEEEEEEECCCC-
T ss_pred ceeeEEEEEecCCc
Confidence 99999999887554
No 391
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.66 E-value=6.2e-08 Score=80.88 Aligned_cols=81 Identities=19% Similarity=0.291 Sum_probs=57.8
Q ss_pred CCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--eEee---ecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEE
Q psy12695 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKE--KIIA---NISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYT 226 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 226 (369)
|..+.+.+|+.++|.|.+.+.|.+.+.|++++ ..+. ............++..........|.|.+++.+|+|.|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 67788999999999999999888899999853 2211 100000001123455544556678999999999999999
Q ss_pred EEEEeC
Q psy12695 227 CRAKNG 232 (369)
Q Consensus 227 C~a~n~ 232 (369)
|.+.|.
T Consensus 86 C~~~n~ 91 (212)
T 1nfd_E 86 CLSSYG 91 (212)
T ss_dssp EEEEET
T ss_pred EEEEcc
Confidence 999973
No 392
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.66 E-value=7.4e-08 Score=81.72 Aligned_cols=94 Identities=15% Similarity=0.246 Sum_probs=62.9
Q ss_pred CCCeeeccCCeEEEEEEeeCCCC-C-eEEEEeCC--eE---eeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 152 TPDVTAEENENVTLSCRATGSPV-P-KIKWIFKE--KI---IANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p~-p-~i~W~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
|..+.+.+|+.++|.|.+.+.+. + .+.|++++ .. +.............++..........|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 67788999999999999988654 4 69999863 11 111110000111234554444556789999999999999
Q ss_pred EEEEEEeCCce---EEEEEEEEEe
Q psy12695 225 YTCRAKNGAGE---VFTNISLNVI 245 (369)
Q Consensus 225 Y~C~a~n~~g~---~~~~~~l~v~ 245 (369)
|.|.+.|..+. ....+.|.|.
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~ 129 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVL 129 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBC
T ss_pred EEEEEEcCCcceeEecCCEEEEEe
Confidence 99999999872 2223455553
No 393
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.66 E-value=4.4e-08 Score=81.16 Aligned_cols=94 Identities=15% Similarity=0.131 Sum_probs=74.2
Q ss_pred ceEEEecCCCCCccCCCC--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQL--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGN 121 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N 121 (369)
.+.++.+++.++.++. + ...++.|+|++|+|. ...|.++++|+.|+|++|+|+...+..|..+++|+.|+|++|
T Consensus 68 L~~L~l~~n~~~~~~~-l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n 146 (197)
T 4ezg_A 68 IKDLTINNIHATNYNP-ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYN 146 (197)
T ss_dssp CSEEEEESCCCSCCGG-GTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSC
T ss_pred CCEEEccCCCCCcchh-hhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCC
Confidence 5678888888876653 3 357899999999976 567888999999999999998866677888899999999999
Q ss_pred c-eecccCCcccccCcCcccccc
Q psy12695 122 P-IQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 122 ~-l~~~~~~~f~~l~~l~~~~~~ 143 (369)
. ++.++ .|..+++|...++.
T Consensus 147 ~~i~~~~--~l~~l~~L~~L~l~ 167 (197)
T 4ezg_A 147 GAITDIM--PLKTLPELKSLNIQ 167 (197)
T ss_dssp TBCCCCG--GGGGCSSCCEEECT
T ss_pred CCccccH--hhcCCCCCCEEECC
Confidence 7 88776 57777776655543
No 394
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.66 E-value=2e-08 Score=96.63 Aligned_cols=83 Identities=20% Similarity=0.337 Sum_probs=69.0
Q ss_pred CCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeChhhccCCcccCeeeccCCcccccCCccccccccccccc
Q psy12695 38 TCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELK 117 (369)
Q Consensus 38 ~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 117 (369)
.|.|. ..+.+++++++|+.+|..++..++.|+|++|+|..-. ..+++|+.|+|++|+|+.||. |.. +|+.|+
T Consensus 55 ~C~~~---~L~~L~Ls~n~L~~lp~~l~~~L~~L~Ls~N~l~~ip-~~l~~L~~L~Ls~N~l~~ip~--l~~--~L~~L~ 126 (571)
T 3cvr_A 55 ECLIN---QFSELQLNRLNLSSLPDNLPPQITVLEITQNALISLP-ELPASLEYLDACDNRLSTLPE--LPA--SLKHLD 126 (571)
T ss_dssp HHHHT---TCSEEECCSSCCSCCCSCCCTTCSEEECCSSCCSCCC-CCCTTCCEEECCSSCCSCCCC--CCT--TCCEEE
T ss_pred ccccC---CccEEEeCCCCCCccCHhHcCCCCEEECcCCCCcccc-cccCCCCEEEccCCCCCCcch--hhc--CCCEEE
Confidence 45543 3678999999999999988899999999999987433 567889999999999999887 554 888899
Q ss_pred ccccceecccC
Q psy12695 118 LSGNPIQKITH 128 (369)
Q Consensus 118 L~~N~l~~~~~ 128 (369)
|++|.|+.++.
T Consensus 127 Ls~N~l~~lp~ 137 (571)
T 3cvr_A 127 VDNNQLTMLPE 137 (571)
T ss_dssp CCSSCCSCCCC
T ss_pred CCCCcCCCCCC
Confidence 99998888876
No 395
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.65 E-value=3.1e-08 Score=93.76 Aligned_cols=108 Identities=31% Similarity=0.573 Sum_probs=92.9
Q ss_pred CCCCCCCeecccCCceEEEecCCCCCccCCCCCCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccc
Q psy12695 33 AECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDS 109 (369)
Q Consensus 33 ~~cp~~C~c~~~~~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~ 109 (369)
.+||..|.|... .+.++|++++|+.||..+|..++.|+|++|+|. +.+|.++++|++|+|++|+|+.+.+.+|.+
T Consensus 1 ~~Cp~~C~C~~~--~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 78 (477)
T 2id5_A 1 TGCPPRCECSAQ--DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNN 78 (477)
T ss_dssp CCCSTTCEEETT--TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred CcccCCCeECCC--CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhC
Confidence 379999999843 358999999999999999999999999999955 568899999999999999999988888999
Q ss_pred ccccccccccccceecccCCcccccCcCccccc
Q psy12695 110 ILELRELKLSGNPIQKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 110 l~~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~ 142 (369)
+++|+.|+|++|.|+.++.+.|.++++|...++
T Consensus 79 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 79 LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp CTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 999999999999998888888887777655443
No 396
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.65 E-value=3.7e-08 Score=88.37 Aligned_cols=82 Identities=20% Similarity=0.235 Sum_probs=62.2
Q ss_pred eeeccCCeEEEEEEeeCCC-CCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeC-
Q psy12695 155 VTAEENENVTLSCRATGSP-VPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG- 232 (369)
Q Consensus 155 ~~~~~G~~~~l~C~~~g~p-~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~- 232 (369)
..+.+|+.+.|.|.+.|.| .|.+.|++++..+... ..++... .+.|.|.+++.+|+|.|+|.|.|.
T Consensus 138 ~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~--------~~~~~~~----~~~L~I~~v~~~D~G~Y~C~a~n~~ 205 (329)
T 3oq3_B 138 LGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIID--------GTKYSQS----GQNLIIHNPELEDSGRYDCYVHYDD 205 (329)
T ss_dssp TTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCS--------SSSEEEE----TTEEEECSCCGGGCEEEEEEEEECC
T ss_pred eEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCC--------CceEecC----CCEEEEeecChhhCEEEEEEEEecc
Confidence 3467899999999999999 8999999999876321 1122221 468999999999999999999997
Q ss_pred -CceE----EEEEEEEEeecC
Q psy12695 233 -AGEV----FTNISLNVIKVE 248 (369)
Q Consensus 233 -~g~~----~~~~~l~v~~~~ 248 (369)
.|.. +..+.|.|...+
T Consensus 206 ~~g~~~~~~s~~~~l~V~~~~ 226 (329)
T 3oq3_B 206 VRIKNDIVVSRCKILTVIPSQ 226 (329)
T ss_dssp TTSSSCEEEEEEEEEEEECCC
T ss_pred cCCCceeEEEeeEEEEEECCC
Confidence 5443 233677777655
No 397
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.65 E-value=9.3e-08 Score=83.87 Aligned_cols=98 Identities=19% Similarity=0.292 Sum_probs=65.4
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEe--CCeEee---ecccccccCCcceEEEEeecceeeEEEcccCCCCC
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIF--KEKIIA---NISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 222 (369)
+...+..+.+.+|++++|.|.+.+.| +.+.|++ ++..+. ............++..........|.|.+++.+|+
T Consensus 165 ~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 243 (282)
T 1qok_A 165 LTQSPAIMSASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDA 243 (282)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EecCCCEEEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHC
Confidence 34446677899999999999999999 8999999 443221 11110001112345444445567899999999999
Q ss_pred EEEEEEEEeCCceEE-EEEEEEEee
Q psy12695 223 GIYTCRAKNGAGEVF-TNISLNVIK 246 (369)
Q Consensus 223 G~Y~C~a~n~~g~~~-~~~~l~v~~ 246 (369)
|.|+|.+.|..+... ....|.|..
T Consensus 244 G~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 244 ATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC-
T ss_pred EEEEEEEeeCCCceEeCCEEEEEec
Confidence 999999988654332 335666654
No 398
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.65 E-value=6.1e-08 Score=74.17 Aligned_cols=81 Identities=22% Similarity=0.266 Sum_probs=54.6
Q ss_pred CCCCCeeeccCCeEEEEEEeeCC-CCCeEEEEeCCeE---eeecccccccCCcceEEE-----EeecceeeEEEcccCCC
Q psy12695 150 PITPDVTAEENENVTLSCRATGS-PVPKIKWIFKEKI---IANISSGLANMNKRQYII-----KTINSLSNLTIVAVTMS 220 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~---~~~~~~~~~~~~~~~~~~-----~~~~~~~~L~I~~v~~~ 220 (369)
..+..+.+.+|++++|.|.+.+. +.+.+.|++++.. +....... ...++.. ........|.|.+++.+
T Consensus 8 q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~---~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 84 (127)
T 2jju_A 8 QPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG---HFPRVTTVSELTKRNNLDFSISISNITPA 84 (127)
T ss_dssp CCCSEEEEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSS---CCTTEEEC-------CCBCCEEECSCCGG
T ss_pred eeCCeEEEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCC---ccCcEEeeEeeeecCCCEEEEEECCCCHH
Confidence 44567899999999999999775 5678999997521 11111100 0012221 11123568999999999
Q ss_pred CCEEEEEEEEeCC
Q psy12695 221 DSGIYTCRAKNGA 233 (369)
Q Consensus 221 D~G~Y~C~a~n~~ 233 (369)
|+|.|.|.+.+..
T Consensus 85 DsG~Y~C~~~~~~ 97 (127)
T 2jju_A 85 DAGTYYCVKFRKG 97 (127)
T ss_dssp GCEEEEEEEEECC
T ss_pred HCEEEEEEEEcCC
Confidence 9999999998864
No 399
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=98.64 E-value=1.3e-07 Score=70.83 Aligned_cols=82 Identities=22% Similarity=0.377 Sum_probs=55.7
Q ss_pred CCCCeeeccCCeEEEEEEeeCC-CCCeEEEEeCCe--------Eeeeccc-cc----ccCCcceEEEEe--ecceeeEEE
Q psy12695 151 ITPDVTAEENENVTLSCRATGS-PVPKIKWIFKEK--------IIANISS-GL----ANMNKRQYIIKT--INSLSNLTI 214 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~~--------~~~~~~~-~~----~~~~~~~~~~~~--~~~~~~L~I 214 (369)
.|..+.+.+|++++|.|.+.+. +...+.|+++.. .+..... .. ......++.+.. ......|+|
T Consensus 4 ~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (115)
T 2atp_B 4 TPSSLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFLSI 83 (115)
T ss_dssp ECSEEEECTTSCEEEEEECCSSCCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEEEE
T ss_pred CCCCEEEcCCCcEEEEEEecCCCCcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCCCEEEEEE
Confidence 3567889999999999999765 466799998542 1111111 00 011234555544 334568999
Q ss_pred cccCCCCCEEEEEEEEeC
Q psy12695 215 VAVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 215 ~~v~~~D~G~Y~C~a~n~ 232 (369)
.+++.+|+|.|.|.+.+.
T Consensus 84 ~~~~~~DsG~Y~C~~~~~ 101 (115)
T 2atp_B 84 MNVKPEDSDFYFCATVGS 101 (115)
T ss_dssp CSCCGGGCEEEEEEEECS
T ss_pred CCCCHHHCEEEEEeEccC
Confidence 999999999999998753
No 400
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.64 E-value=1.6e-07 Score=71.74 Aligned_cols=94 Identities=20% Similarity=0.289 Sum_probs=60.9
Q ss_pred CCCCeeeccCCeEEEEEEeeCCCCC----eEEEEeCCe-----Eeeec--cccc-ccC---CcceEEEEee---------
Q psy12695 151 ITPDVTAEENENVTLSCRATGSPVP----KIKWIFKEK-----IIANI--SSGL-ANM---NKRQYIIKTI--------- 206 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p~p----~i~W~~~~~-----~~~~~--~~~~-~~~---~~~~~~~~~~--------- 206 (369)
.+..+.+.+|++++|.|.+.+.+.+ .+.|++... .+... .... ... -..++.+...
T Consensus 8 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~ 87 (128)
T 3r0n_A 8 VLPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTE 87 (128)
T ss_dssp CCSEEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCC
T ss_pred cCCeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccc
Confidence 3567889999999999999887665 799999631 11100 0000 000 1123332211
Q ss_pred --cceeeEEEcccCCCCCEEEEEEEEe-CCceEEEEEEEEE
Q psy12695 207 --NSLSNLTIVAVTMSDSGIYTCRAKN-GAGEVFTNISLNV 244 (369)
Q Consensus 207 --~~~~~L~I~~v~~~D~G~Y~C~a~n-~~g~~~~~~~l~v 244 (369)
.....|.|.+++.+|+|.|.|.+.+ ..|.....+.|.|
T Consensus 88 ~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V 128 (128)
T 3r0n_A 88 AELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRV 128 (128)
T ss_dssp CBCSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEC
T ss_pred cCCCCeEEEEccCCchhCeEEEEEEEeCCCCCcccEEEEEC
Confidence 1245899999999999999998754 6688777777754
No 401
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.63 E-value=4.9e-08 Score=80.11 Aligned_cols=66 Identities=15% Similarity=0.168 Sum_probs=51.3
Q ss_pred CeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCC
Q psy12695 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGA 233 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 233 (369)
...+.+|+.++|.|.+.+. .+.+.|++++..+... .......+.|.|.+++.+|+|.|.|.|.|..
T Consensus 107 ~~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~-------------~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 107 GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQ-------------RGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp CSEEETTCEEEEEEECSSS-CSEEEEEEESSSCEEE-------------EEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred CCccccCCEEEEEEEcCCC-CCEEEEEECCcccccc-------------ccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 4568899999999998764 5789999988654320 0122346789999999999999999998864
No 402
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=98.63 E-value=7.4e-08 Score=86.53 Aligned_cols=96 Identities=22% Similarity=0.349 Sum_probs=79.4
Q ss_pred CceEEEecCCCCCccCCCCC--CCccEEEeecceeC---h---------hhccCCcccCeeeccCCcccccCCccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQLD--VGTQVLDLSDNFLD---R---------YTFRKLINLVELDLSYNQIQFVPSHILDSIL 111 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~~--~~~~~L~l~~n~i~---~---------~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~ 111 (369)
..+.++.+++.++.+|..+. ..++.|+|++|++. + +.|.++++|+.|+|++|+|+.+|. .|..++
T Consensus 128 ~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~-~l~~l~ 206 (328)
T 4fcg_A 128 GLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPA-SIANLQ 206 (328)
T ss_dssp TCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCG-GGGGCT
T ss_pred CCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchH-hhcCCC
Confidence 35789999999999998763 57999999998732 2 236679999999999999999876 489999
Q ss_pred ccccccccccceecccCCcccccCcCcccccc
Q psy12695 112 ELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 112 ~L~~L~L~~N~l~~~~~~~f~~l~~l~~~~~~ 143 (369)
+|+.|+|++|.++.+++ .|..+++|...++.
T Consensus 207 ~L~~L~L~~N~l~~l~~-~l~~l~~L~~L~Ls 237 (328)
T 4fcg_A 207 NLKSLKIRNSPLSALGP-AIHHLPKLEELDLR 237 (328)
T ss_dssp TCCEEEEESSCCCCCCG-GGGGCTTCCEEECT
T ss_pred CCCEEEccCCCCCcCch-hhccCCCCCEEECc
Confidence 99999999999999876 47788887665554
No 403
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=98.62 E-value=2.2e-07 Score=71.81 Aligned_cols=99 Identities=20% Similarity=0.213 Sum_probs=64.8
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCC-CCeEEEEeCC--e---Eeeecccc-cccCCcceEEEEe--ecceeeEEEcccCCC
Q psy12695 150 PITPDVTAEENENVTLSCRATGSP-VPKIKWIFKE--K---IIANISSG-LANMNKRQYIIKT--INSLSNLTIVAVTMS 220 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p-~p~i~W~~~~--~---~~~~~~~~-~~~~~~~~~~~~~--~~~~~~L~I~~v~~~ 220 (369)
..+..+.+.+|++++|.|.+.+.. ...+.|+++. + .+...... .......+|.+.. ......|.|.+++.+
T Consensus 14 Q~p~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~ 93 (134)
T 3bik_B 14 FYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRN 93 (134)
T ss_dssp EECSEEEEETTSCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEECSCCGG
T ss_pred ECCCeEEEeCCCCEEEEEEeCCCCCCcEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCCCCEEEEEECCCChH
Confidence 346778899999999999997654 4679999852 2 11111111 0111234565532 344568999999999
Q ss_pred CCEEEEEEEEeCCce----EEEEEEEEEeecC
Q psy12695 221 DSGIYTCRAKNGAGE----VFTNISLNVIKVE 248 (369)
Q Consensus 221 D~G~Y~C~a~n~~g~----~~~~~~l~v~~~~ 248 (369)
|+|.|.|.+.+..+. ....+.|.|....
T Consensus 94 Dsg~Y~C~~~~~~~~~~~~~~~gt~L~V~~~~ 125 (134)
T 3bik_B 94 DSGIYLCGAISLHPKAKIEESPGAELVVTERI 125 (134)
T ss_dssp GCEEEEEEEEECSSSCEEEECCCEEEEEECCC
T ss_pred HCEEEEEEEEeCCCCceEEEcCCEEEEEeCCC
Confidence 999999999876432 2234677776544
No 404
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.62 E-value=1.1e-07 Score=83.34 Aligned_cols=84 Identities=21% Similarity=0.406 Sum_probs=65.8
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEE
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 224 (369)
.|.+...+..+.+.+|+.++|.|.+.| .+.|++++..+.. .....+.|.|.+++.+|+|.
T Consensus 12 ~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~~~----------------~~~~~~~L~i~~~~~~d~G~ 71 (290)
T 2o26_X 12 PPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFNEM----------------VENKKNEWIQEKAEATRTGT 71 (290)
T ss_dssp CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSSCE----------------EEECSSEEEETTCCGGGCEE
T ss_pred CCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcceee----------------ecCCCceEEEeccCHHhCeE
Confidence 456666678889999999999999988 8999998865410 01123789999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEeecCCcc
Q psy12695 225 YTCRAKNGAGEVFTNISLNVIKVETAV 251 (369)
Q Consensus 225 Y~C~a~n~~g~~~~~~~l~v~~~~~~~ 251 (369)
|+|.+.| |. ...+.|.|...+...
T Consensus 72 Y~C~~~n--g~-~~~~~l~V~~~~~~~ 95 (290)
T 2o26_X 72 YTCSNSN--GL-TSSIYVFVRDPAKLF 95 (290)
T ss_dssp EEEEESS--SC-EEEEEEEEECSSCCB
T ss_pred EEEEeeC--Cc-cEEEEEEEeCCCccc
Confidence 9999999 54 677888887766544
No 405
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.62 E-value=9.2e-08 Score=72.31 Aligned_cols=85 Identities=22% Similarity=0.300 Sum_probs=55.1
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCC-CCCeEEEEeCCeE---eeecccccccCCcceEEE---EeecceeeEEEcccCCC
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGS-PVPKIKWIFKEKI---IANISSGLANMNKRQYII---KTINSLSNLTIVAVTMS 220 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~L~I~~v~~~ 220 (369)
+...+..+.+.+|++++|.|.+.+. +.+.+.|++++.. +........ ..+..... ........|.|.+++.+
T Consensus 10 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~-~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 88 (120)
T 2yz1_A 10 VTQPEKSVSVAAGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEH-FPRVTNVSDATKRNNMDFSIRISNVTPE 88 (120)
T ss_dssp EECCSSEEEECTTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECEEC-TTTCCSEEECCBSSTTBCCEEECSCCGG
T ss_pred EECCCceEEEeCCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCcc-cCcccceeeccccCCCeEEEEECCCCHH
Confidence 3445677889999999999999765 5678999997521 111110000 00000000 01123468999999999
Q ss_pred CCEEEEEEEEeCC
Q psy12695 221 DSGIYTCRAKNGA 233 (369)
Q Consensus 221 D~G~Y~C~a~n~~ 233 (369)
|+|.|.|.+.+..
T Consensus 89 DsG~Y~C~~~~~~ 101 (120)
T 2yz1_A 89 DAGTYYCVKFQKG 101 (120)
T ss_dssp GCEEEEEEEEECC
T ss_pred HCEEEEEEEEcCC
Confidence 9999999998764
No 406
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.62 E-value=1.9e-07 Score=70.08 Aligned_cols=82 Identities=13% Similarity=0.243 Sum_probs=54.2
Q ss_pred CCCeeeccCCeEEEEEEeeCC---CCCeEEEEeCC--e---Eeeeccc-c-c-c-cCCcceEEEEeecc--eeeEEEccc
Q psy12695 152 TPDVTAEENENVTLSCRATGS---PVPKIKWIFKE--K---IIANISS-G-L-A-NMNKRQYIIKTINS--LSNLTIVAV 217 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~---p~p~i~W~~~~--~---~~~~~~~-~-~-~-~~~~~~~~~~~~~~--~~~L~I~~v 217 (369)
+..+.+.+|++++|.|.+.+. +...+.|++.. . .+..... . . . .....++....... ...|+|.++
T Consensus 5 ~~~~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~ 84 (116)
T 3bj9_1 5 PPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISEL 84 (116)
T ss_dssp CSEEEEETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSC
T ss_pred CCcEEEcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECCC
Confidence 345889999999999999754 45679999853 1 1221110 0 0 0 01124555543332 348999999
Q ss_pred CCCCCEEEEEEEEeCC
Q psy12695 218 TMSDSGIYTCRAKNGA 233 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~ 233 (369)
+.+|+|.|.|.+.+..
T Consensus 85 ~~~DsG~Y~C~~~~~~ 100 (116)
T 3bj9_1 85 QPEDEAMYYCAMGARS 100 (116)
T ss_dssp CGGGCEEEEEEECCSS
T ss_pred ChhHCEEEEEEEeCCC
Confidence 9999999999998754
No 407
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.62 E-value=4.8e-08 Score=87.78 Aligned_cols=93 Identities=20% Similarity=0.179 Sum_probs=80.2
Q ss_pred CceEEEecCCCCCccCCCCCC---CccEEEeecce--eChhhccCCcccC-eeeccCCcccccCCccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQLDV---GTQVLDLSDNF--LDRYTFRKLINLV-ELDLSYNQIQFVPSHILDSILELRELKLS 119 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~~~---~~~~L~l~~n~--i~~~~f~~l~~L~-~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 119 (369)
..+.++..+++++.||..... .++.|+|.+|- |..++|.++.+|+ .|+|.+ .++.|++++|.++.+|+.|+|+
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ni~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~ 305 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHNLKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLAT 305 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEEC
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcccceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeC
Confidence 356788888889999987643 58899998875 6689999999999 999988 8999999999999999999999
Q ss_pred ccceecccCCcccccCcCcc
Q psy12695 120 GNPIQKITHEAFINVPKLNL 139 (369)
Q Consensus 120 ~N~l~~~~~~~f~~l~~l~~ 139 (369)
+|.++.+..++|.++++|..
T Consensus 306 ~n~i~~I~~~aF~~~~~L~~ 325 (329)
T 3sb4_A 306 GDKITTLGDELFGNGVPSKL 325 (329)
T ss_dssp SSCCCEECTTTTCTTCCCCE
T ss_pred CCccCccchhhhcCCcchhh
Confidence 99999999999998877654
No 408
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.61 E-value=1.6e-07 Score=80.37 Aligned_cols=99 Identities=20% Similarity=0.339 Sum_probs=65.1
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC-----eEeeecc--ccc-c--cCCcceEEEEe-ecceeeEEEcc
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-----KIIANIS--SGL-A--NMNKRQYIIKT-INSLSNLTIVA 216 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~-----~~~~~~~--~~~-~--~~~~~~~~~~~-~~~~~~L~I~~ 216 (369)
+...+..+.+.+|+.++|.|.+.+.+.+.+.|++.. ..+.... ... . .....++.+.. ......|.|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 83 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTS 83 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECS
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECC
Confidence 334566788999999999999999999999999821 1111111 000 0 01113444432 24466899999
Q ss_pred cCCCCCEEEEEEEEeCCc----eEEEEEEEEEee
Q psy12695 217 VTMSDSGIYTCRAKNGAG----EVFTNISLNVIK 246 (369)
Q Consensus 217 v~~~D~G~Y~C~a~n~~g----~~~~~~~l~v~~ 246 (369)
++.+|+|.|.|.+.|..+ .......|.|..
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 117 (246)
T 4dzb_B 84 AHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLE 117 (246)
T ss_dssp CCGGGCEEEEEEECCSSGGGCCEECCCEEEEEES
T ss_pred CCHHHCEEEEEEEecCCCCcceEEcCCEEEEEec
Confidence 999999999999987643 233445666664
No 409
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.61 E-value=3.9e-08 Score=82.86 Aligned_cols=82 Identities=17% Similarity=0.258 Sum_probs=59.5
Q ss_pred CeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCC
Q psy12695 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGA 233 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 233 (369)
...+.+|+.++|.|.+.+.|.+.+.|++++..+... . ......+.|.|.+++.+|+|.|+|.|.|..
T Consensus 114 ~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~----------~---~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 114 GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ----------H---QSGEHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS----------E---EECSSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc----------c---cCCCccCEEEEccCCcccCEEEEEEEEcCC
Confidence 457889999999997778888999999998654320 0 112235789999999999999999999864
Q ss_pred c-----eEEEEEEEEEeecC
Q psy12695 234 G-----EVFTNISLNVIKVE 248 (369)
Q Consensus 234 g-----~~~~~~~l~v~~~~ 248 (369)
+ ..+..+.|.|....
T Consensus 181 ~~~~~s~~S~~~~l~V~g~~ 200 (218)
T 1uct_A 181 SPYLWSFPSNALELVVTDSI 200 (218)
T ss_dssp STTEECCCCCCEEEEEC---
T ss_pred CCCcCCCCCCcEEEEEecCC
Confidence 2 23445677776543
No 410
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.61 E-value=2e-07 Score=71.73 Aligned_cols=97 Identities=21% Similarity=0.276 Sum_probs=60.4
Q ss_pred CCCCeeeccCCeEEEEEEee-------CCCCCeEEEEeCCeE------eeeccccc--ccCCcceEEEEe--ecceeeEE
Q psy12695 151 ITPDVTAEENENVTLSCRAT-------GSPVPKIKWIFKEKI------IANISSGL--ANMNKRQYIIKT--INSLSNLT 213 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~-------g~p~p~i~W~~~~~~------~~~~~~~~--~~~~~~~~~~~~--~~~~~~L~ 213 (369)
.|..+.+.+|+.++|.|.+. +.....+.|++.... +....... ......|+.+.. ..+...|.
T Consensus 12 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 91 (132)
T 1nko_A 12 MQSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLS 91 (132)
T ss_dssp ECSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBCCEE
T ss_pred CCCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCceEEE
Confidence 45678899999999999997 345578999996532 11111000 001123554432 23456899
Q ss_pred EcccCCCCCEEEEEEEEeCCceEE---EEEEEEEeec
Q psy12695 214 IVAVTMSDSGIYTCRAKNGAGEVF---TNISLNVIKV 247 (369)
Q Consensus 214 I~~v~~~D~G~Y~C~a~n~~g~~~---~~~~l~v~~~ 247 (369)
|.+++.+|+|.|.|.+.+...... ..+.|.|...
T Consensus 92 I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~~l~V~~~ 128 (132)
T 1nko_A 92 IRDARMSDAGRYFFRMEKGNIKWNYKYDQLSVNVTAL 128 (132)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEECTTSCEEEEEECC
T ss_pred EcccCcccCeeEEEEEEcCCCcccccCCceEEEeccc
Confidence 999999999999999987642111 2355666543
No 411
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=98.61 E-value=3.5e-07 Score=68.51 Aligned_cols=82 Identities=15% Similarity=0.308 Sum_probs=57.5
Q ss_pred CCCeeeccCCeEEEEEEeeCC-CCCeEEEEeCC--e---Eeeeccc-c--cc-cCCcceEEEEeecceeeEEEcccCCCC
Q psy12695 152 TPDVTAEENENVTLSCRATGS-PVPKIKWIFKE--K---IIANISS-G--LA-NMNKRQYIIKTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~--~---~~~~~~~-~--~~-~~~~~~~~~~~~~~~~~L~I~~v~~~D 221 (369)
|..+.+.+|++++|.|.+.+. +.+.+.|++.. . .+..... . .. ..-..++.+........|+|.+++.+|
T Consensus 8 p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~D 87 (115)
T 2otu_A 8 SSSASFSLGASAKLTCTLSSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPED 87 (115)
T ss_dssp CCCEECCTTCCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCCEEECCCCCEEEEEEecCCCCCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEccCCEEEEEECCCChhH
Confidence 677899999999999999765 56789999842 1 1221111 0 00 011345665555566789999999999
Q ss_pred CEEEEEEEEeCC
Q psy12695 222 SGIYTCRAKNGA 233 (369)
Q Consensus 222 ~G~Y~C~a~n~~ 233 (369)
+|.|.|.+.+..
T Consensus 88 sg~Y~C~~~~~~ 99 (115)
T 2otu_A 88 EAIYICGVGDTI 99 (115)
T ss_dssp CEEEEEEEEECC
T ss_pred CEEEEEEEecCC
Confidence 999999998754
No 412
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.61 E-value=4.9e-08 Score=74.05 Aligned_cols=94 Identities=21% Similarity=0.226 Sum_probs=63.3
Q ss_pred CCeeeccCCeEEEEEEe-eCCCCCeEEEEeCCe-Eeeeccccc-----ccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 153 PDVTAEENENVTLSCRA-TGSPVPKIKWIFKEK-IIANISSGL-----ANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~-~g~p~p~i~W~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
..+.+.+|++++|.|.. .......+.|+++.. .+....... ... +.+.. .....+.|.|.+++.+|+|.|
T Consensus 12 ~pv~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f-~~R~~--l~~~~~sL~I~nv~~~DsG~Y 88 (121)
T 2edo_A 12 VHMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKF-KGRVR--LDPQSGALYISKVQKEDNSTY 88 (121)
T ss_dssp BCCEEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTT-TTTCE--ECTTTCCEEESSCCGGGCSEE
T ss_pred EEEEEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhc-CCcEE--EeCCCceEEEeCCCHHHCeEE
Confidence 44788999999999987 444456799999764 232211100 001 11222 223457899999999999999
Q ss_pred EEEEEeCCc-eEEEEEEEEEeecCC
Q psy12695 226 TCRAKNGAG-EVFTNISLNVIKVET 249 (369)
Q Consensus 226 ~C~a~n~~g-~~~~~~~l~v~~~~~ 249 (369)
.|.+.+..+ .....+.|.|....+
T Consensus 89 ~c~v~~~~~~~~~~~~~L~V~~~~~ 113 (121)
T 2edo_A 89 IMRVLKKTGNEQEWKIKLQVLDPVP 113 (121)
T ss_dssp EEEEEETTTEEEECCEECEEECCSC
T ss_pred EEEEEcCCCcEEEEEEEEEEECCCC
Confidence 999988765 456678888877553
No 413
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.60 E-value=6.8e-08 Score=80.10 Aligned_cols=92 Identities=14% Similarity=0.114 Sum_probs=61.4
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|.+...|. ..+.+|++++|.|.+.+ +.+.+.|+|++..+...... .........+.|.|.+++.+|+|.|
T Consensus 9 P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~--------~~~~~~~~~~~l~I~~v~~~D~G~Y 78 (201)
T 1nkr_A 9 PSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLI--------GEHHDGVSKANFSISRMTQDLAGTY 78 (201)
T ss_dssp CEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEE--------CEEETTEEEEEEEESSCCGGGCEEE
T ss_pred CeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceee--------eecCCCCceEEEEeccCCcccCeEE
Confidence 34444444 67889999999999974 77899999988654321100 0001112356899999999999999
Q ss_pred EEEEEeCC-----ceEEEEEEEEEeec
Q psy12695 226 TCRAKNGA-----GEVFTNISLNVIKV 247 (369)
Q Consensus 226 ~C~a~n~~-----g~~~~~~~l~v~~~ 247 (369)
.|.+.|.. ...+..+.|.|...
T Consensus 79 ~C~a~~~~~~~~~~~~s~~~~l~V~~~ 105 (201)
T 1nkr_A 79 RCYGSVTHSPYQVSAPSDPLDIVIIGL 105 (201)
T ss_dssp EEEEEBTTBTTCCCCCCCCEEEEEECS
T ss_pred EEeEecCCCCccccCCCCCEEEEeecc
Confidence 99998753 12344566777653
No 414
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.60 E-value=2e-07 Score=78.20 Aligned_cols=95 Identities=21% Similarity=0.255 Sum_probs=62.8
Q ss_pred CCCeeeccCCeEEEEEEeeCCC--CCeEEEEeCC--eEeee---ccc--cc---ccCCcceEEEEee--cceeeEEEccc
Q psy12695 152 TPDVTAEENENVTLSCRATGSP--VPKIKWIFKE--KIIAN---ISS--GL---ANMNKRQYIIKTI--NSLSNLTIVAV 217 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~~~~---~~~--~~---~~~~~~~~~~~~~--~~~~~L~I~~v 217 (369)
+..+.+.+|+.++|.|.+.|.| .+.+.|++++ ..+.. ... .. ......++.+... .....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 5667899999999999999876 6789999863 22210 000 00 0001234444322 34578999999
Q ss_pred CCCCCEEEEEEEEeCCce----EEEEEEEEEee
Q psy12695 218 TMSDSGIYTCRAKNGAGE----VFTNISLNVIK 246 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~g~----~~~~~~l~v~~ 246 (369)
+.+|+|.|.|.+.|..+. ....+.|.|..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 119 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSS 119 (219)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEECCCEEEEECC
T ss_pred CcccCEEEEEEEeccCcccceeecCceEEEEec
Confidence 999999999999998742 22345666665
No 415
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=98.60 E-value=2.9e-07 Score=68.90 Aligned_cols=83 Identities=22% Similarity=0.364 Sum_probs=57.4
Q ss_pred CCCCCeeeccCCeEEEEEEeeCC-CCCeEEEEeC--Ce----E-eeeccccc--cc--CCcceEEEEeecceeeEEEccc
Q psy12695 150 PITPDVTAEENENVTLSCRATGS-PVPKIKWIFK--EK----I-IANISSGL--AN--MNKRQYIIKTINSLSNLTIVAV 217 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~--~~----~-~~~~~~~~--~~--~~~~~~~~~~~~~~~~L~I~~v 217 (369)
..|..+.+.+|++++|.|.+.+. +...+.|+++ ++ . +....... .. ....++..........|+|.++
T Consensus 5 q~p~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~~~l~~~~~~~~~~~~~~~~~rf~~~~~~~~~~L~I~~~ 84 (114)
T 2hp4_A 5 VSPLDRTWNLGETVELKCQVLLSNPTSGASWLFQPRGAAASPTFLLYLNQNKPKAAEGLDTQRFSGKRLGDTFVLTLSDF 84 (114)
T ss_dssp EECCSCCCCTTCCEEEEEEECCSSCCSCEEEEEEESSSSCCCEEEEEESSSSCEECTTCCTTTEEEEEETTEEEEEESSC
T ss_pred eCCCEEEEcCCCCEEEEEEeecCCCCceEEEEEECCCCCCCcEEEEEEcCCCccccCCCCcccEEEEecCCEEEEEECCC
Confidence 44677889999999999999754 3567999974 32 1 11111110 01 1134666655555678999999
Q ss_pred CCCCCEEEEEEEEeC
Q psy12695 218 TMSDSGIYTCRAKNG 232 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~ 232 (369)
+.+|+|.|.|.+.+.
T Consensus 85 ~~~Dsg~Y~C~~~~~ 99 (114)
T 2hp4_A 85 RRENEGYYFCSALSN 99 (114)
T ss_dssp CGGGCEEEEEEEEET
T ss_pred CHHHCEEEEEEEecC
Confidence 999999999999875
No 416
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.60 E-value=1.2e-08 Score=101.50 Aligned_cols=87 Identities=21% Similarity=0.275 Sum_probs=76.2
Q ss_pred CceEEEecCCCCCccCCCC--CCCccEEEeecceeC--hhhccCCcccCeeeccCCcccccCCccccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQL--DVGTQVLDLSDNFLD--RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGN 121 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~--~~~~~~L~l~~n~i~--~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N 121 (369)
..+.++.++|.|+.+|..+ ...++.|+|++|+|. +..|.+|++|+.|+|++|.|+.||.. |..|++|+.|+|++|
T Consensus 248 ~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 248 FLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTTLPWE-FGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCCCCCSS-TTSCTTCCCEECTTS
T ss_pred CCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCCccChh-hhcCCCccEEeCCCC
Confidence 3567999999999999876 357999999999977 56799999999999999999999886 999999999999999
Q ss_pred ceecccCCcccc
Q psy12695 122 PIQKITHEAFIN 133 (369)
Q Consensus 122 ~l~~~~~~~f~~ 133 (369)
+|+...+..|..
T Consensus 327 ~l~~~~p~~~~~ 338 (727)
T 4b8c_D 327 PLEKQFLKILTE 338 (727)
T ss_dssp CCCSHHHHHHHH
T ss_pred ccCCCChHHHhh
Confidence 999877666543
No 417
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.60 E-value=1.6e-07 Score=81.13 Aligned_cols=98 Identities=19% Similarity=0.281 Sum_probs=64.3
Q ss_pred CCCCeeeccCCeEEEEEEeeCCC--CCeEEEEeCC--eEe---eecc--cc---cccCCcceEEEEee--cceeeEEEcc
Q psy12695 151 ITPDVTAEENENVTLSCRATGSP--VPKIKWIFKE--KII---ANIS--SG---LANMNKRQYIIKTI--NSLSNLTIVA 216 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~~---~~~~--~~---~~~~~~~~~~~~~~--~~~~~L~I~~ 216 (369)
.|..+.+.+|++++|.|.+.|.| .+.+.|++++ ... .... .. .......++.+... .....|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (256)
T 1nqb_A 6 QSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSS 85 (256)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECc
Confidence 35678899999999999999876 6789999842 211 1110 00 00001234444332 3457899999
Q ss_pred cCCCCCEEEEEEEEeCCce-----EEEEEEEEEeecC
Q psy12695 217 VTMSDSGIYTCRAKNGAGE-----VFTNISLNVIKVE 248 (369)
Q Consensus 217 v~~~D~G~Y~C~a~n~~g~-----~~~~~~l~v~~~~ 248 (369)
++.+|+|.|.|.+.|..|. ....+.|.|...+
T Consensus 86 v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~ 122 (256)
T 1nqb_A 86 LTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDI 122 (256)
T ss_dssp CCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCC
T ss_pred CChhhCEEEEEEEeeccCccceeEEcCceeeeecccc
Confidence 9999999999999998662 2234567666543
No 418
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.59 E-value=7.6e-08 Score=79.45 Aligned_cols=74 Identities=14% Similarity=0.032 Sum_probs=44.8
Q ss_pred CeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCC
Q psy12695 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGA 233 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 233 (369)
...+.+|+.++|.|.+.+.| +.+.|++++..+....... .........+.|.|.+++.+|+|.|.|.|.|..
T Consensus 108 ~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~-------~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 179 (196)
T 2d3v_A 108 SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDS-------QLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRH 179 (196)
T ss_dssp ---------CEEEEEESSCC-SEEEEEEC---CCEEEEEC-------EECTTSCEEEEEECCCCBTTBCEEEEEEEEETT
T ss_pred CccccCCCcEEEEEEcCCCC-CEEEEEccCCccccccccc-------ccccCCCceeEEEeeecCcccCeeEEEEEEccC
Confidence 35788999999999999998 8999999987653211000 000001124689999999999999999999986
Q ss_pred ce
Q psy12695 234 GE 235 (369)
Q Consensus 234 g~ 235 (369)
+.
T Consensus 180 ~~ 181 (196)
T 2d3v_A 180 IL 181 (196)
T ss_dssp EE
T ss_pred CC
Confidence 53
No 419
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.59 E-value=5e-08 Score=78.37 Aligned_cols=80 Identities=23% Similarity=0.399 Sum_probs=60.6
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCC-CCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEE
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSP-VPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYT 226 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p-~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 226 (369)
+...+....+.+|+.+.|.|.+.+.| .+.+.|++++..+.. ....+.|.+++.+|+|.|.
T Consensus 7 i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~-------------------~~~~~~~~~~~~~d~G~Y~ 67 (170)
T 3ry4_A 7 LKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPT-------------------HTQPSYRFKANNNDSGEYT 67 (170)
T ss_dssp EEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTT-------------------CCSSEEEEECCGGGCEEEE
T ss_pred EEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEccc-------------------CccceEEEecccccCeEEE
Confidence 34446667899999999999999987 578999999876542 1235677889999999999
Q ss_pred EEEEeCCceEEEEEEEEEeecC
Q psy12695 227 CRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 227 C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
|.+.|..+. ..+.|.|...+
T Consensus 68 C~~~~~~~s--~~~~l~v~~~~ 87 (170)
T 3ry4_A 68 CQTGQTSLS--DPVHLTVLFEW 87 (170)
T ss_dssp EEETTSBCC--CCEEEEEECCS
T ss_pred EEEeCCCce--EeEEEEEECCc
Confidence 999976544 34666666543
No 420
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.59 E-value=7.9e-08 Score=91.93 Aligned_cols=69 Identities=26% Similarity=0.447 Sum_probs=33.9
Q ss_pred CccEEEeecceeChhhccCC-cccCeeeccCCcccccCCcccccccccccccccccceecccCCcccccCc
Q psy12695 67 GTQVLDLSDNFLDRYTFRKL-INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136 (369)
Q Consensus 67 ~~~~L~l~~n~i~~~~f~~l-~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~f~~l~~ 136 (369)
.++.|+|++|+|....+..+ ++|+.|+|++|+|+.||...+ .+++|+.|+|++|+|+.++...|..+++
T Consensus 400 ~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~~ip~~~~-~l~~L~~L~L~~N~l~~l~~~~~~~l~~ 469 (520)
T 2z7x_B 400 SLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKSIPKQVV-KLEALQELNVASNQLKSVPDGIFDRLTS 469 (520)
T ss_dssp TCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCCCCCGGGG-GCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred cCCEEECcCCCCCcchhhhhcccCCEEECCCCcccccchhhh-cCCCCCEEECCCCcCCccCHHHhccCCc
Confidence 34444444444443333333 355555555555555554433 4555555555555555555444444444
No 421
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.58 E-value=1.2e-07 Score=81.67 Aligned_cols=101 Identities=11% Similarity=0.168 Sum_probs=66.2
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCC--CCCeEEEEeCC--e---Eeeecc-c----ccccCCcceEEEEe--ecceeeE
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGS--PVPKIKWIFKE--K---IIANIS-S----GLANMNKRQYIIKT--INSLSNL 212 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~--p~p~i~W~~~~--~---~~~~~~-~----~~~~~~~~~~~~~~--~~~~~~L 212 (369)
.+...+..+++.+|++++|.|.+.+. +.+.+.|++.. . .+.... . ........++.+.. ......|
T Consensus 8 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 87 (256)
T 3juy_B 8 VQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYM 87 (256)
T ss_dssp CEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEE
T ss_pred EEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEE
Confidence 33445688999999999999999883 67789999743 1 111111 0 00001123454442 2345679
Q ss_pred EEcccCCCCCEEEEEEEEeC------------CceEEEEEEEEEeec
Q psy12695 213 TIVAVTMSDSGIYTCRAKNG------------AGEVFTNISLNVIKV 247 (369)
Q Consensus 213 ~I~~v~~~D~G~Y~C~a~n~------------~g~~~~~~~l~v~~~ 247 (369)
.|.+++.+|+|.|.|.+.|. .+.....+.|.|...
T Consensus 88 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~ 134 (256)
T 3juy_B 88 ELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSG 134 (256)
T ss_dssp EECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSC
T ss_pred EECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCC
Confidence 99999999999999999987 333444566777654
No 422
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.58 E-value=7.7e-08 Score=79.24 Aligned_cols=79 Identities=24% Similarity=0.378 Sum_probs=60.0
Q ss_pred CCCCeeeccCCeEEEEEE-eeCCCC-CeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEE
Q psy12695 151 ITPDVTAEENENVTLSCR-ATGSPV-PKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCR 228 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~-~~g~p~-p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 228 (369)
.+..+.+.+|+.+.|.|. +.+.|. +.+.|++++..+..... ...+ .....+.|.|.+++.+|+|.|.|.
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~------~~~~---~~~~~~~L~i~~v~~~d~G~Y~C~ 84 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMD------KRRF---VSQTNGNLYIANVEASDKGNYSCF 84 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCS------SSEE---ECTTTCCEEESSCCGGGCEEEEEE
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeC------CCeE---EEcCCCeEEECcCCcccCeEEEEE
Confidence 457789999999999999 889998 99999998865532111 1111 122356799999999999999999
Q ss_pred EEeCCceEEE
Q psy12695 229 AKNGAGEVFT 238 (369)
Q Consensus 229 a~n~~g~~~~ 238 (369)
+.|..+....
T Consensus 85 ~~~~~~~~~~ 94 (201)
T 3s97_C 85 VSSPSITKSV 94 (201)
T ss_dssp EEEGGGTEEE
T ss_pred EEecCCCcch
Confidence 9997766543
No 423
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.58 E-value=2.7e-07 Score=79.66 Aligned_cols=96 Identities=17% Similarity=0.240 Sum_probs=62.9
Q ss_pred CCCeeeccCCeEEEEEEeeCCC--CCeEEEEeCC--e---Eeeecc-ccc---ccCCcceEEEEee--cceeeEEEcccC
Q psy12695 152 TPDVTAEENENVTLSCRATGSP--VPKIKWIFKE--K---IIANIS-SGL---ANMNKRQYIIKTI--NSLSNLTIVAVT 218 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~---~~~~~~-~~~---~~~~~~~~~~~~~--~~~~~L~I~~v~ 218 (369)
+..+.+.+|+.++|.|.+.|.| .+.+.|++++ . .+.... ... ......++.+... .....|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (257)
T 1f3r_B 7 SGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQ 86 (257)
T ss_dssp ECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCC
T ss_pred CCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCC
Confidence 3456799999999999999885 6889999852 1 111100 000 0001234444332 345789999999
Q ss_pred CCCCEEEEEEEEeCCc-------eE--EEEEEEEEeec
Q psy12695 219 MSDSGIYTCRAKNGAG-------EV--FTNISLNVIKV 247 (369)
Q Consensus 219 ~~D~G~Y~C~a~n~~g-------~~--~~~~~l~v~~~ 247 (369)
.+|+|.|.|.+.|..| .. ...+.|.|...
T Consensus 87 ~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~ 124 (257)
T 1f3r_B 87 TDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSG 124 (257)
T ss_dssp TTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSS
T ss_pred cccCEEEEEEEcccccCccccccccccCCceEEEEEeC
Confidence 9999999999999854 11 13356777654
No 424
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.58 E-value=1.9e-07 Score=94.35 Aligned_cols=96 Identities=32% Similarity=0.464 Sum_probs=71.7
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEE
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRA 229 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 229 (369)
..+....+.+|+.+.|.|.+.|.|.|.+.|++++..+........ ..+..........|.|.+++.+|+|.|+|.|
T Consensus 434 ~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~----~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 509 (816)
T 3dmk_A 434 QAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQV----GQYVTVNGDVVSYLNITSVHANDGGLYKCIA 509 (816)
T ss_dssp EECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEE----EEEECTTSCEEEEEEESSCCTTTCEEEEEEE
T ss_pred ecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCccc----ccEEecCCCcEEEEEEeeccccCCEEEEEEE
Confidence 345667888999999999999999999999999877643211000 0000000112346999999999999999999
Q ss_pred EeCCceEEEEEEEEEeecCC
Q psy12695 230 KNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 230 ~n~~g~~~~~~~l~v~~~~~ 249 (369)
.|..|.....+.|.|...+.
T Consensus 510 ~n~~g~~~~~~~l~V~~~p~ 529 (816)
T 3dmk_A 510 KSKVGVAEHSAKLNVYGLPY 529 (816)
T ss_dssp EETTEEEEEEEEEEECSSCE
T ss_pred EECCCeEEEEEEEEEecCCe
Confidence 99999999999999987653
No 425
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.57 E-value=1.4e-07 Score=78.22 Aligned_cols=93 Identities=17% Similarity=0.192 Sum_probs=63.8
Q ss_pred CCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeee-----ccccc---c--cCCcceEEEEeecceeeEEEcccCCCCC
Q psy12695 153 PDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIAN-----ISSGL---A--NMNKRQYIIKTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~-----~~~~~---~--~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 222 (369)
....+.+|+.+.|.|.+.+.+.+.+.|++++..... ..... . ..-..++.+ ...+.|.|.+++.+|+
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~---~~~~~L~i~~v~~~D~ 83 (208)
T 3r4d_A 7 VPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREII---YSNGSLLFQMITMKDM 83 (208)
T ss_dssp ESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEE---CTTSCEEECSCCGGGC
T ss_pred ccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEE---ecCCeEEEccccccCC
Confidence 346788999999999998999999999987532111 00000 0 000112211 1345799999999999
Q ss_pred EEEEEEEEeCC-ceEEEEEEEEEeecC
Q psy12695 223 GIYTCRAKNGA-GEVFTNISLNVIKVE 248 (369)
Q Consensus 223 G~Y~C~a~n~~-g~~~~~~~l~v~~~~ 248 (369)
|.|.|.+.+.. +.....+.|.|...+
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~ 110 (208)
T 3r4d_A 84 GVYTLDMTDENYRRTQATVRFHVHQPV 110 (208)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEECCC
T ss_pred eEEEEEEEcccCceeEEEEEEEeccCC
Confidence 99999999985 666777888887553
No 426
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.57 E-value=5.1e-08 Score=81.46 Aligned_cols=91 Identities=20% Similarity=0.380 Sum_probs=61.0
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCC-CC-CeEEEEeCCeEeeecccccc-cCCcceEEEEeecceeeEEEcccCCCCC
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGS-PV-PKIKWIFKEKIIANISSGLA-NMNKRQYIIKTINSLSNLTIVAVTMSDS 222 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~-p~-p~i~W~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 222 (369)
|.+...+....+.+|+.++|.|.+.|. |+ +.+.|++++..+........ ......+. ..+.|.|.++..+|.
T Consensus 115 P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~-----~~s~L~i~~~~~~d~ 189 (213)
T 3mj8_L 115 PSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYM-----ATSYLTMTADAWKSR 189 (213)
T ss_dssp CEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEE-----EEEEEEEESHHHHSC
T ss_pred CeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEE-----EEEEEEEeHHHcCCC
Confidence 334333444555689999999999885 33 38999999987753211000 00111121 145699999999999
Q ss_pred EEEEEEEEeCCceEEEEEE
Q psy12695 223 GIYTCRAKNGAGEVFTNIS 241 (369)
Q Consensus 223 G~Y~C~a~n~~g~~~~~~~ 241 (369)
|.|+|.|.|..+.....+.
T Consensus 190 G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 190 NTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp SCEEEEEEETTEEEEEEEC
T ss_pred CEEEEEEEECCccEEeeec
Confidence 9999999999977666543
No 427
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.57 E-value=6e-08 Score=83.01 Aligned_cols=97 Identities=15% Similarity=0.131 Sum_probs=65.3
Q ss_pred CCCCCeeeccCCeEEEEEEeeC---CCCCeEEEEeCCeEe----eecccc-----------------cccCCcceEEEEe
Q psy12695 150 PITPDVTAEENENVTLSCRATG---SPVPKIKWIFKEKII----ANISSG-----------------LANMNKRQYIIKT 205 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g---~p~p~i~W~~~~~~~----~~~~~~-----------------~~~~~~~~~~~~~ 205 (369)
..+..+.+.+|+.+.|.|.+.+ .|.+.+.|++++... ...... .......+..+.
T Consensus 7 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~- 85 (250)
T 2fbo_J 7 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVA- 85 (250)
T ss_dssp CSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECS-
T ss_pred cCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEec-
Confidence 3456788999999999999988 888999999976431 100000 000001111111
Q ss_pred ecceeeEEEcccCCCCCEEEEEEEEeCCce-----EEEEEEEEEeec
Q psy12695 206 INSLSNLTIVAVTMSDSGIYTCRAKNGAGE-----VFTNISLNVIKV 247 (369)
Q Consensus 206 ~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~-----~~~~~~l~v~~~ 247 (369)
..+...|.|.+++.+|+|.|.|.+.|..+. ....+.|.|...
T Consensus 86 ~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~ 132 (250)
T 2fbo_J 86 NLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 132 (250)
T ss_dssp CTTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT
T ss_pred cCCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEecc
Confidence 112458999999999999999999997764 356788888765
No 428
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.57 E-value=1e-08 Score=92.36 Aligned_cols=100 Identities=18% Similarity=0.208 Sum_probs=67.4
Q ss_pred CCccCCCCCeeeccCCeEEEEEEe---eCCC-CCeEEEEeCCeEeeecccccccCCcceEEEEeecc---eeeEEEcccC
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRA---TGSP-VPKIKWIFKEKIIANISSGLANMNKRQYIIKTINS---LSNLTIVAVT 218 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~---~g~p-~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~L~I~~v~ 218 (369)
|.+...+....+.+|+.+.|.|.+ .|.| .+.+.|++++..+.............++....... ...|.|.+++
T Consensus 227 P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~ 306 (339)
T 3o4o_C 227 PVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVT 306 (339)
T ss_dssp CEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSC
T ss_pred CEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEec
Confidence 344445566788999999999999 8999 88899999887653221110000111111111110 2279999999
Q ss_pred CCCC-EEEEEEEEeCCceEEEEEEEEEe
Q psy12695 219 MSDS-GIYTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 219 ~~D~-G~Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
.+|+ |.|.|.|.|..|..++.+.+.+.
T Consensus 307 ~~d~~G~Y~C~a~N~~G~~~~~~~~~~~ 334 (339)
T 3o4o_C 307 REDLHMDFKCVVHNTLSFQTLRTTVKEH 334 (339)
T ss_dssp CCSCCCCCEEEEEETTEEECCBCCCCC-
T ss_pred hhhcCccEEEEEEeccCceEEEEEhhHh
Confidence 9997 99999999999998877666543
No 429
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.56 E-value=1.2e-07 Score=82.33 Aligned_cols=90 Identities=19% Similarity=0.274 Sum_probs=74.2
Q ss_pred CceEEEecCCCCCccCCCC--CCCccEEEeecceeChh-hccCCcccCeeeccCCcccccCCcccccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQL--DVGTQVLDLSDNFLDRY-TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~--~~~~~~L~l~~n~i~~~-~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~ 122 (369)
..+.+++++++++.+|. + ...++.|+|++|+|... .|.++++|+.|+|++|+|+.++...+ .+|+.|+|++|.
T Consensus 42 ~L~~L~l~~n~i~~l~~-l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~L~~N~l~~l~~~~~---~~L~~L~L~~N~ 117 (263)
T 1xeu_A 42 GVQNFNGDNSNIQSLAG-MQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKNLNGIPS---ACLSRLFLDNNE 117 (263)
T ss_dssp TCSEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCSCCTTCCC---SSCCEEECCSSC
T ss_pred cCcEEECcCCCcccchH-HhhCCCCCEEECCCCccCCChhhccCCCCCEEECCCCccCCcCcccc---CcccEEEccCCc
Confidence 45789999999999983 4 46899999999997732 29999999999999999999987544 899999999999
Q ss_pred eecccCCcccccCcCcccc
Q psy12695 123 IQKITHEAFINVPKLNLED 141 (369)
Q Consensus 123 l~~~~~~~f~~l~~l~~~~ 141 (369)
|+.++ .|..+++|...+
T Consensus 118 l~~~~--~l~~l~~L~~L~ 134 (263)
T 1xeu_A 118 LRDTD--SLIHLKNLEILS 134 (263)
T ss_dssp CSBSG--GGTTCTTCCEEE
T ss_pred cCCCh--hhcCcccccEEE
Confidence 99985 466666655433
No 430
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=98.56 E-value=1e-07 Score=86.74 Aligned_cols=75 Identities=16% Similarity=0.258 Sum_probs=63.2
Q ss_pred eeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCCc
Q psy12695 155 VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG 234 (369)
Q Consensus 155 ~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g 234 (369)
..+.+|+.+.|.|.+.+.|.|.+.|++++..+. .....|.|.+++.+|+|.|.|.|.|..+
T Consensus 106 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~-------------------~~~~~L~i~~v~~~d~G~Y~C~a~~~~~ 166 (363)
T 1wio_A 106 THLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI-------------------QGGKTLSVSQLELQDSGTWTCTVLQNQK 166 (363)
T ss_dssp SSEESBSCEEEEEECCTTCCCCEEEECSSSCEE-------------------EESSEEEECSBCGGGCEECEEEEEETTE
T ss_pred eEEecCCCEEEEEEcCCCCCCeEEEEcCCCccc-------------------ccceEEEEeeCChhcCCEEEEEEecCCC
Confidence 467899999999999999999999999875432 1246899999999999999999999988
Q ss_pred eEEEEEEEEEeecC
Q psy12695 235 EVFTNISLNVIKVE 248 (369)
Q Consensus 235 ~~~~~~~l~v~~~~ 248 (369)
.....+.+.|...+
T Consensus 167 ~~~~~~~l~v~~~p 180 (363)
T 1wio_A 167 KVEFKIDIVVLAFQ 180 (363)
T ss_dssp EEEECCEECEECCS
T ss_pred eEEEEEEEEEecCC
Confidence 88777788777544
No 431
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=98.55 E-value=2.6e-07 Score=70.72 Aligned_cols=85 Identities=20% Similarity=0.400 Sum_probs=58.7
Q ss_pred ccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeC--Ce------Eeeeccc---cc----ccCCcceEEE-Eeecceee
Q psy12695 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFK--EK------IIANISS---GL----ANMNKRQYII-KTINSLSN 211 (369)
Q Consensus 148 i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~--~~------~~~~~~~---~~----~~~~~~~~~~-~~~~~~~~ 211 (369)
+...|..+.+.+|++++|.|.+.+.....+.|+++ +. .+..... .. ......+|.. ........
T Consensus 7 v~Q~p~~~~v~~G~~vtL~C~~s~~~~~~v~WyrQ~~g~~l~~p~~l~~~~~~~~~~~~~~~~~~~~rfs~~~~~~~~~~ 86 (128)
T 1nez_G 7 LRIFPKKMDAELGQKVDLVCEVLGSVSQGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRDTNNKYV 86 (128)
T ss_dssp EEEESSCEEECTTCCEEEEEEEESCCSSCEEEEEEESSCSSCCCEEEEEECSSSCCEEECTTTTGGGTEEEEEETTTEEE
T ss_pred eEECCCeEEEcCCCCEEEEEEeCccCCCcEEEEEeCCCCCCCCcEEEEEEecccCCceeeccccCCCcEEEEeCCCCEEE
Confidence 34456788999999999999998766678999984 22 1222111 00 0112356665 44445678
Q ss_pred EEEcccCCCCCEEEEEEEEeC
Q psy12695 212 LTIVAVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 212 L~I~~v~~~D~G~Y~C~a~n~ 232 (369)
|.|.+++.+|+|.|.|.+...
T Consensus 87 L~I~~~~~~Dsg~YyCa~~~~ 107 (128)
T 1nez_G 87 LTLNKFSKENEGYYFCSVISN 107 (128)
T ss_dssp EEESSCCGGGCEEEEEEEEET
T ss_pred EEECCCCHHHCEEEEEEEcCC
Confidence 999999999999999998754
No 432
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.55 E-value=3.1e-07 Score=78.57 Aligned_cols=97 Identities=15% Similarity=0.204 Sum_probs=63.7
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--eE---eeeccccc--ccCCcceEEEEe-ecceeeEEEcccCCCC
Q psy12695 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--KI---IANISSGL--ANMNKRQYIIKT-INSLSNLTIVAVTMSD 221 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~---~~~~~~~~--~~~~~~~~~~~~-~~~~~~L~I~~v~~~D 221 (369)
..+..+.+.+|+.++|.|.+.+.+.+.+.|++.. .. +....... ......++.+.. ......|.|.+++.+|
T Consensus 6 ~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D 85 (245)
T 3nfj_J 6 QWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSD 85 (245)
T ss_dssp EECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGG
T ss_pred CCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhh
Confidence 3466788999999999999999999999999832 11 11111000 001112333332 3456789999999999
Q ss_pred CEEEEEEEEeCCc------eEEEEEEEEEee
Q psy12695 222 SGIYTCRAKNGAG------EVFTNISLNVIK 246 (369)
Q Consensus 222 ~G~Y~C~a~n~~g------~~~~~~~l~v~~ 246 (369)
+|.|.|.+.|..| .....+.|.|..
T Consensus 86 ~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~ 116 (245)
T 3nfj_J 86 SGFYLCAWSVSVGAGVPTIYFGEGSWLTVVE 116 (245)
T ss_dssp CEEEEEEEECCTTTSSCCCEECCCEEEEEES
T ss_pred CEEEEEEEeeccCCCceeEEECCCeEEEEEc
Confidence 9999999998322 233445666764
No 433
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.55 E-value=2.7e-07 Score=75.13 Aligned_cols=93 Identities=22% Similarity=0.277 Sum_probs=63.9
Q ss_pred CCeeeccCCeEEEEEEeeC-CCCCeEEEEeC-CeEeeecccc-cc-cC-C--cceEEEEeecceeeEEEcccCCCCCEEE
Q psy12695 153 PDVTAEENENVTLSCRATG-SPVPKIKWIFK-EKIIANISSG-LA-NM-N--KRQYIIKTINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g-~p~p~i~W~~~-~~~~~~~~~~-~~-~~-~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 225 (369)
..+.+.+|++++|.|.+.+ .+.+.|.|++. +..+...... .. .. . +.++.+ ....+.|.|.+++.+|+|.|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l--~~~~~sL~I~~v~~~D~G~Y 84 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDL--DKTNGALRIYNVSKEDRGDY 84 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEE--CTTTCCEEECSCCGGGCEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEE--eCCCccEEEcCCCHHHCeEE
Confidence 4678999999999999854 34678999994 4333321111 00 00 1 123332 23567899999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEeecC
Q psy12695 226 TCRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 226 ~C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
.|.+.+.. .....+.|.|..++
T Consensus 85 ~C~v~~~~-~~~~~~~L~V~~~~ 106 (180)
T 2dru_A 85 YMRMLHET-EDQWKITMEVYEMV 106 (180)
T ss_dssp EEEEESSS-EEEEEEEEEEECCC
T ss_pred EEEEEcCC-eEEEEEEEEEECCC
Confidence 99998776 66777888887643
No 434
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.55 E-value=6.8e-08 Score=83.71 Aligned_cols=99 Identities=19% Similarity=0.347 Sum_probs=61.6
Q ss_pred CccCCCCCeeeccCCeEEEEEEee---CCCCCeEEEEeCCeEeeec------ccc-cc--cCCcceEEE--EeecceeeE
Q psy12695 147 NIRPITPDVTAEENENVTLSCRAT---GSPVPKIKWIFKEKIIANI------SSG-LA--NMNKRQYII--KTINSLSNL 212 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~---g~p~p~i~W~~~~~~~~~~------~~~-~~--~~~~~~~~~--~~~~~~~~L 212 (369)
.+...+..+.+.+|+.+.|.|.+. +.+.+.+.|++.+...... ... .. ..-..++.+ ........|
T Consensus 7 ~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 86 (268)
T 3mj6_A 7 GLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSL 86 (268)
T ss_dssp -----CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCE
T ss_pred ccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEE
Confidence 344556778999999999999998 7778889999965321100 000 00 000012211 112234789
Q ss_pred EEcccCCCCCEEEEEEEEeCCce--EEEEEEEEEe
Q psy12695 213 TIVAVTMSDSGIYTCRAKNGAGE--VFTNISLNVI 245 (369)
Q Consensus 213 ~I~~v~~~D~G~Y~C~a~n~~g~--~~~~~~l~v~ 245 (369)
.|.+++.+|+|.|.|.+.|..+. ....+.|.|.
T Consensus 87 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~ 121 (268)
T 3mj6_A 87 LLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL 121 (268)
T ss_dssp EECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE
T ss_pred EECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe
Confidence 99999999999999999987654 3455666665
No 435
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=98.54 E-value=6.8e-08 Score=86.15 Aligned_cols=96 Identities=17% Similarity=0.232 Sum_probs=77.5
Q ss_pred ceEEEecC-CCCC-ccCCCC--CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCccccccccccccccc
Q psy12695 47 KETVLCKA-KNFT-TIPEQL--DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLS 119 (369)
Q Consensus 47 ~~~~~c~~-~~l~-~ip~~~--~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 119 (369)
.+.++.++ +++. .+|..+ -..+++|+|++|+|. +..|.++++|++|+|++|+|+...+..|..+++|+.|+|+
T Consensus 78 L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECc
Confidence 46788884 7776 678766 357999999999975 6789999999999999999997667789999999999999
Q ss_pred ccceecccCCcccccC-cCccccc
Q psy12695 120 GNPIQKITHEAFINVP-KLNLEDF 142 (369)
Q Consensus 120 ~N~l~~~~~~~f~~l~-~l~~~~~ 142 (369)
+|.|+...+..|..+. .|...++
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L 181 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTI 181 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEEC
T ss_pred CCcccCcCCHHHhhhhhcCcEEEC
Confidence 9999965556666665 5544433
No 436
>1xed_A Polymeric-immunoglobulin receptor; IG-like fold, immune system; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.54 E-value=5.4e-07 Score=67.73 Aligned_cols=96 Identities=16% Similarity=0.252 Sum_probs=60.3
Q ss_pred CCCCeeeccCCeEEEEEEeeCCC---CCeEEEEeCCe-----EeeecccccccCCcceEEEEe--ecceeeEEEcccCCC
Q psy12695 151 ITPDVTAEENENVTLSCRATGSP---VPKIKWIFKEK-----IIANISSGLANMNKRQYIIKT--INSLSNLTIVAVTMS 220 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p---~p~i~W~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~~ 220 (369)
.|..+.+.+|++++|.|...+.. ...+.|+++.. .+.............++.... ......|+|.+++.+
T Consensus 6 ~p~~v~~~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~ 85 (117)
T 1xed_A 6 GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQD 85 (117)
T ss_dssp CCSEEEEETTCCEEEEEECCCCHHHHHSCEEEEEC-----CEEEEESSSCBCTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred CCCeEEEecCCCEEEEeEecCCcCCCCceEEEEEeCCCCCCEEEEEeCCeEcceEcCCEEEEecCCCCEEEEEECCCChH
Confidence 45678899999999999986541 35699998642 122211111111233444432 345568999999999
Q ss_pred CCEEEEEEEEeCCceEEEEEEEEEee
Q psy12695 221 DSGIYTCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 221 D~G~Y~C~a~n~~g~~~~~~~l~v~~ 246 (369)
|+|.|.|.+............+.|..
T Consensus 86 DsG~Y~C~v~~~~~~l~f~~~~~~~~ 111 (117)
T 1xed_A 86 DSGRYKCGLGINSRGLSFDVSLEVLE 111 (117)
T ss_dssp GCEEEEEEESCGGGCCEEEEEEEEEC
T ss_pred HCEEEEEEEEeCCCCeeEEEEEEEee
Confidence 99999999876533344445555543
No 437
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.54 E-value=3.6e-08 Score=83.66 Aligned_cols=100 Identities=13% Similarity=0.192 Sum_probs=49.9
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCe--E---eeecccccccCCcceEEEEeecceeeEEEcccCCCC
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEK--I---IANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 221 (369)
.+...+..+.+.+|++++|.|.+.+.|.+.+.|++++. . +.............++..........|.|.+++.+|
T Consensus 25 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 104 (233)
T 3bqu_C 25 TVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSED 104 (233)
T ss_dssp CEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCC
T ss_pred eEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHH
Confidence 33444677889999999999999998888999998531 1 111000000001122222222334589999999999
Q ss_pred CEEEEEEEEeCCceEE-EEEEEEEee
Q psy12695 222 SGIYTCRAKNGAGEVF-TNISLNVIK 246 (369)
Q Consensus 222 ~G~Y~C~a~n~~g~~~-~~~~l~v~~ 246 (369)
+|.|.|.+.|..+... ....+.|..
T Consensus 105 ~G~Y~C~~~~~~~~~~~~~~~l~V~~ 130 (233)
T 3bqu_C 105 VADYYCLQSDNLPYTFGGGTNLEIKR 130 (233)
T ss_dssp CSEEEEEECSSSSCCBCCCCBC---C
T ss_pred CEEEEEEEecCCceeecCCEEEEEeC
Confidence 9999999998765322 223455543
No 438
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.54 E-value=3e-08 Score=88.48 Aligned_cols=90 Identities=19% Similarity=0.086 Sum_probs=69.1
Q ss_pred ceEEEecCCCCCc---cCCCC----CCCccEEEeecceeC---h---hhccCCcccCeeeccCCcccccC-Ccccccccc
Q psy12695 47 KETVLCKAKNFTT---IPEQL----DVGTQVLDLSDNFLD---R---YTFRKLINLVELDLSYNQIQFVP-SHILDSILE 112 (369)
Q Consensus 47 ~~~~~c~~~~l~~---ip~~~----~~~~~~L~l~~n~i~---~---~~f~~l~~L~~L~Ls~N~l~~i~-~~~f~~l~~ 112 (369)
.+.++.++|.+.. +|..+ ...++.|+|++|+|. . ..|.++++|+.|+|++|+|+.++ ...|.++++
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 254 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTT
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCC
Confidence 5789999998753 23222 357899999999987 1 45678899999999999999865 356778899
Q ss_pred cccccccccceecccCCcccccCc
Q psy12695 113 LRELKLSGNPIQKITHEAFINVPK 136 (369)
Q Consensus 113 L~~L~L~~N~l~~~~~~~f~~l~~ 136 (369)
|+.|+|++|.|+.++...+.++..
T Consensus 255 L~~L~Ls~N~l~~ip~~~~~~L~~ 278 (312)
T 1wwl_A 255 LNSLNLSFTGLKQVPKGLPAKLSV 278 (312)
T ss_dssp CCEEECTTSCCSSCCSSCCSEEEE
T ss_pred CCEEECCCCccChhhhhccCCceE
Confidence 999999999999888776644443
No 439
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.54 E-value=7.5e-08 Score=81.32 Aligned_cols=81 Identities=16% Similarity=0.290 Sum_probs=55.0
Q ss_pred CccCCCCCeeeccCCeE-EEEEEe-eCCCCCeEEEEeCCeEeeecccccccCCcceEEEEe----ec-----ceeeEEEc
Q psy12695 147 NIRPITPDVTAEENENV-TLSCRA-TGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT----IN-----SLSNLTIV 215 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~-~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~L~I~ 215 (369)
.+...+....+.+|+.+ .|.|.+ .|.|.|.+.|++++..+...... ..++.+.. .. ..+.|.|.
T Consensus 120 ~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~L~i~ 194 (231)
T 2pet_A 120 EVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEM-----NPEGYMTSRTVREASGLLSLTSTLYLR 194 (231)
T ss_dssp EEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSC-----CSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred EEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcccccc-----ccceeecceeEecCCCeEEEEEEEEEe
Confidence 33444556677899988 999999 89999999999999876543210 00111110 00 02568887
Q ss_pred ccCCCCCEEEEEEEEeC
Q psy12695 216 AVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~ 232 (369)
....+|.|.|+|.|.|.
T Consensus 195 ~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 195 LRKDDRDASFHCAAHYS 211 (231)
T ss_dssp CCGGGGGCEEEEEEEEE
T ss_pred cchhhCCceEEEEEEcC
Confidence 66666799999999994
No 440
>3dmm_D T-cell surface glycoprotein CD8 beta chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=98.54 E-value=4.2e-07 Score=71.58 Aligned_cols=101 Identities=25% Similarity=0.393 Sum_probs=64.3
Q ss_pred CccCCCCCeeeccCCeEEEEEEeeCC-CCCeEEEEeCC-----eE---eeeccc-c----cccCCcceEEEE--eeccee
Q psy12695 147 NIRPITPDVTAEENENVTLSCRATGS-PVPKIKWIFKE-----KI---IANISS-G----LANMNKRQYIIK--TINSLS 210 (369)
Q Consensus 147 ~i~~~~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~-----~~---~~~~~~-~----~~~~~~~~~~~~--~~~~~~ 210 (369)
.+...|..+.+.+|+.++|.|.+.+. ....+.|+++. .. +..... . .......+|.+. ......
T Consensus 3 ~v~Q~p~~~~v~~G~svtL~C~~s~~~~~~~v~Wyrq~~g~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~ 82 (150)
T 3dmm_D 3 ALIQTPSSLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRP 82 (150)
T ss_dssp -CEEECSEEEEETTSCEEEEEECCCSSCCCEEEEEEEECCSSCCEEEEEEEEETTTEEEECTTTTTTCCEEEESTTSSSC
T ss_pred ccEECCCeEEEeCCCcEEEEEEecCCCCCceEEEEEeCCCCCCCccEEEEEEecCCceEeCCCCccCcEEEEEcCCCCEE
Confidence 34455678899999999999999764 56679999862 11 211111 0 011123466554 344567
Q ss_pred eEEEcccCCCCCEEEEEEEEeCCceEE-EEEEEEEeec
Q psy12695 211 NLTIVAVTMSDSGIYTCRAKNGAGEVF-TNISLNVIKV 247 (369)
Q Consensus 211 ~L~I~~v~~~D~G~Y~C~a~n~~g~~~-~~~~l~v~~~ 247 (369)
.|.|.+++.+|+|.|.|.+.......+ ....|.|...
T Consensus 83 sL~I~~l~~~Dsg~Y~C~~~~~~~~~fG~GT~L~V~~~ 120 (150)
T 3dmm_D 83 FLSIMNVKPEDSDFYFCATVGSPKMVFGTGTKLTVVDV 120 (150)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEESC
T ss_pred EEEECCCChhhCEEEEEEEecCCcceECCCEEEEEeCC
Confidence 899999999999999999975432222 2245666553
No 441
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.54 E-value=1.2e-07 Score=96.07 Aligned_cols=96 Identities=23% Similarity=0.217 Sum_probs=79.2
Q ss_pred ceEEEecCCCCCccCCCC---CCCccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQL---DVGTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG 120 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~---~~~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 120 (369)
.+.++.+++.+..++... ...++.|+|++|+|. +.+|.++++|+.|+|++|+|+.+.+.+|.++++|+.|+|++
T Consensus 268 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 347 (844)
T 3j0a_A 268 VRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQK 347 (844)
T ss_dssp CCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCS
T ss_pred ccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCC
Confidence 567888888888765433 357899999999854 67899999999999999999999888999999999999999
Q ss_pred cceecccCCcccccCcCccccc
Q psy12695 121 NPIQKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 121 N~l~~~~~~~f~~l~~l~~~~~ 142 (369)
|.|..+++..|.++++|...++
T Consensus 348 N~i~~~~~~~~~~l~~L~~L~L 369 (844)
T 3j0a_A 348 NHIAIIQDQTFKFLEKLQTLDL 369 (844)
T ss_dssp CCCCCCCSSCSCSCCCCCEEEE
T ss_pred CCCCccChhhhcCCCCCCEEEC
Confidence 9999998888888877655433
No 442
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.54 E-value=2.6e-07 Score=75.10 Aligned_cols=80 Identities=10% Similarity=0.199 Sum_probs=57.8
Q ss_pred eeeccCCeEEEEEEeeCCCCC--eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeC
Q psy12695 155 VTAEENENVTLSCRATGSPVP--KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232 (369)
Q Consensus 155 ~~~~~G~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 232 (369)
..+.+|+.+.|.|.+.|.|.| .+.|++++..+...... .....|.|. +.+|+|.|.|.+.|.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~--------------~~~~~l~i~--~~~d~G~Y~C~~~n~ 71 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP--------------GQKTEFKVD--SDDQWGEYSCVFLPE 71 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC--------------CSEEEEEEC--GGGCCEEEEEEEEST
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc--------------CCcEEEEEe--chhhCeEEEEEEECC
Confidence 567899999999999988887 89999998776532211 113456665 689999999999984
Q ss_pred CceEEEEEEEEEeecCCcccC
Q psy12695 233 AGEVFTNISLNVIKVETAVAQ 253 (369)
Q Consensus 233 ~g~~~~~~~l~v~~~~~~~~~ 253 (369)
. ...+.|.|...|.....
T Consensus 72 ~---~~~~~l~V~~~P~~~~~ 89 (184)
T 3b5h_A 72 P---MGTANIQLHGPPRVKAV 89 (184)
T ss_dssp T---SCEEEEEECCSCCCEES
T ss_pred c---CcEEEEEEecCCceeec
Confidence 3 24567777766644333
No 443
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=98.53 E-value=1.6e-07 Score=85.32 Aligned_cols=93 Identities=14% Similarity=0.112 Sum_probs=66.7
Q ss_pred CCeeeccCCeEEEEEEeeC-----CCCCeEEEEeCCeEeeecccccccCCcceEEEEe----------ecceeeEEEccc
Q psy12695 153 PDVTAEENENVTLSCRATG-----SPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT----------INSLSNLTIVAV 217 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g-----~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~L~I~~v 217 (369)
..+.+.+|+.+.|.|.+.| .|.|.+.|++++..+.... ..+.....++.+.. ......|.|.++
T Consensus 184 ~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 262 (363)
T 1wio_A 184 SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSW-ITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQA 262 (363)
T ss_dssp EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCE-EEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSB
T ss_pred CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceE-EEEEecCCeeeccccccchhhhcccCCceEEEEccC
Confidence 4566788999999998887 7889999999886553210 00000011222211 112448999999
Q ss_pred CCCCCEEEEEEEEeC--CceEEEEEEEEEee
Q psy12695 218 TMSDSGIYTCRAKNG--AGEVFTNISLNVIK 246 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~--~g~~~~~~~l~v~~ 246 (369)
+.+|+|.|.|.|.|. .|.....+.|.|..
T Consensus 263 ~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~ 293 (363)
T 1wio_A 263 LPQYAGSGNLTLALEAKTGKLHQEVNLVVMR 293 (363)
T ss_dssp CGGGCEEEEEEECBTTTTCCEEEEEEEEEEE
T ss_pred CcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE
Confidence 999999999999999 99999999988874
No 444
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.53 E-value=2.8e-07 Score=78.87 Aligned_cols=96 Identities=19% Similarity=0.242 Sum_probs=62.4
Q ss_pred CCCeeeccCCeEEEEEEeeCCC--CCeEEEEeCC--eE---eeecccc-----cccCCcceEEEEee--cceeeEEEccc
Q psy12695 152 TPDVTAEENENVTLSCRATGSP--VPKIKWIFKE--KI---IANISSG-----LANMNKRQYIIKTI--NSLSNLTIVAV 217 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~---~~~~~~~-----~~~~~~~~~~~~~~--~~~~~L~I~~v 217 (369)
+..+.+.+|+.++|.|.+.|.| .+.+.|+++. .. +...... .......++.+... .....|.|.++
T Consensus 9 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (247)
T 2ghw_B 9 SGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSL 88 (247)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred cCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcC
Confidence 3568899999999999999987 5789999843 11 1100000 00011234444332 34568999999
Q ss_pred CCCCCEEEEEEEEeCCce--EEEEEEEEEeec
Q psy12695 218 TMSDSGIYTCRAKNGAGE--VFTNISLNVIKV 247 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~g~--~~~~~~l~v~~~ 247 (369)
+.+|+|.|.|.+.|..+. ....+.|.|...
T Consensus 89 ~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~ 120 (247)
T 2ghw_B 89 RAEDTAVYYCARDRSYYLDYWGQGTLVTVSSG 120 (247)
T ss_dssp CGGGCEEEEEEEEETTEEEEECCCEEEEECSC
T ss_pred CHHHCEEEEEeeeccCCccccCCceEEEEecc
Confidence 999999999999998433 223356777643
No 445
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=98.53 E-value=6.5e-07 Score=63.39 Aligned_cols=89 Identities=16% Similarity=0.230 Sum_probs=59.7
Q ss_pred CCeeeccCCeEEEEEEeeC-CCCCeEEEEeCCeEe-eecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEE
Q psy12695 153 PDVTAEENENVTLSCRATG-SPVPKIKWIFKEKII-ANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAK 230 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g-~p~p~i~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 230 (369)
+..++..|+.+.|.|.+.+ .+.|.++|-+-+... ....... ....-........|.+.++..+|+|.|.|.|.
T Consensus 19 S~hsv~~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~~~-----q~w~E~~N~s~fvLhf~~V~~sDsGsYRCsAn 93 (120)
T 2aw2_A 19 SEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQ-----TSWKEEKNISFFILHFEPVLPNDNGSYRCSAN 93 (120)
T ss_dssp EEEEEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSSC-----EEEEECSSCEEEEEEESSCCGGGCEEEEEEEE
T ss_pred ccceEecCCeEEEEccEEeccCCCceEEEecCCceEEECcccc-----ccceecCCeeEEEEEEeeeeEcCCcceEEEee
Confidence 4567899999999999998 699999999866321 1111100 00000001113479999999999999999999
Q ss_pred eCCceEE-EEEEEEEee
Q psy12695 231 NGAGEVF-TNISLNVIK 246 (369)
Q Consensus 231 n~~g~~~-~~~~l~v~~ 246 (369)
+..|... ..+.+.|.+
T Consensus 94 ~~sg~ieSHsvtI~Vt~ 110 (120)
T 2aw2_A 94 FQSNLIESHSTTLYVTD 110 (120)
T ss_dssp ETTEEEECCCEEEEEEC
T ss_pred CCCCcEEeeEEEEEEEe
Confidence 9998854 345555543
No 446
>3bdb_A Novel immune-type receptor 11; immunoglobulin variable domain-like beta-sandwich, stalk region, immune system; 2.80A {Ictalurus punctatus}
Probab=98.53 E-value=2.7e-07 Score=71.54 Aligned_cols=97 Identities=18% Similarity=0.249 Sum_probs=65.1
Q ss_pred CCCeeeccCCeEEEEEEee-CCCCCeEEEEeCC--e---Eeeecc-c-cc--c--cCCcceEEEEeecceeeEEEcccCC
Q psy12695 152 TPDVTAEENENVTLSCRAT-GSPVPKIKWIFKE--K---IIANIS-S-GL--A--NMNKRQYIIKTINSLSNLTIVAVTM 219 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~-g~p~p~i~W~~~~--~---~~~~~~-~-~~--~--~~~~~~~~~~~~~~~~~L~I~~v~~ 219 (369)
+..+.+.+|++++|.|.+. +.....+.|+++. + .+.... . .. . .....++..........|+|.+++.
T Consensus 6 p~~v~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~L~I~~~~~ 85 (137)
T 3bdb_A 6 LHVKTVKRGENVTMECSMSKVTNKNNLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIGARE 85 (137)
T ss_dssp CEECCCCTTCEECCCCBCTTCCCGGGBEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEEESCCS
T ss_pred CCeEEEcCCCCEEEEeecCCCcCcceEEEEEECCCCCCEEEEEEEcCCCcceecCcccCCcEEEEecCCEEEEEECCCCH
Confidence 4567889999999999997 7666789999853 2 222111 1 10 0 0113566665555567899999999
Q ss_pred CCCEEEEEEEEeCCceE-EEEEEEEEeecC
Q psy12695 220 SDSGIYTCRAKNGAGEV-FTNISLNVIKVE 248 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~g~~-~~~~~l~v~~~~ 248 (369)
+|+|.|.|.+.+..... .....|.|....
T Consensus 86 ~Dsg~Y~C~~~~~~~~~fg~GT~L~V~~~~ 115 (137)
T 3bdb_A 86 DDGGEYFCGEVEGIIIKFTSGTRLQFEGSN 115 (137)
T ss_dssp TTCEEEEEEEECSSCEEEEEEEEECCCCCC
T ss_pred HHCEEEEEEEccCCeEEECCCEEEEEECCC
Confidence 99999999998765433 334566666543
No 447
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.53 E-value=6.4e-08 Score=86.48 Aligned_cols=95 Identities=13% Similarity=0.096 Sum_probs=74.4
Q ss_pred CceEEEecCCCCCccCCCCCCCccEEEeecceeChhhccCCcccCeeeccCCcccccCCcccccccccccccccccceec
Q psy12695 46 GKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~~~~~~~L~l~~n~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~ 125 (369)
..+.++.+++.++.+|.. ..++.|+|++|+|....+..+++|+.|+|++|+|+.+++..|..+++|+.|+|++|.|+.
T Consensus 81 ~L~~L~Ls~n~l~~l~~~--~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 158 (317)
T 3o53_A 81 TLRTLDLNNNYVQELLVG--PSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT 158 (317)
T ss_dssp TCCEEECCSSEEEEEEEC--TTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCE
T ss_pred CCCEEECcCCccccccCC--CCcCEEECCCCccCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCc
Confidence 356788888888877743 688889999998876666677888899999999988888888888889999999998888
Q ss_pred ccCCccc-ccCcCccccc
Q psy12695 126 ITHEAFI-NVPKLNLEDF 142 (369)
Q Consensus 126 ~~~~~f~-~l~~l~~~~~ 142 (369)
+....|. .++.|...++
T Consensus 159 ~~~~~~~~~l~~L~~L~L 176 (317)
T 3o53_A 159 VNFAELAASSDTLEHLNL 176 (317)
T ss_dssp EEGGGGGGGTTTCCEEEC
T ss_pred ccHHHHhhccCcCCEEEC
Confidence 7766553 5666555444
No 448
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.53 E-value=2.4e-07 Score=75.60 Aligned_cols=92 Identities=17% Similarity=0.248 Sum_probs=63.5
Q ss_pred CCeeeccCCeEEEEEEee--CCCCCeEEEEe--CCeEeeeccccccc-CCcceEEEEeecceeeEEEcccCCCCCEEEEE
Q psy12695 153 PDVTAEENENVTLSCRAT--GSPVPKIKWIF--KEKIIANISSGLAN-MNKRQYIIKTINSLSNLTIVAVTMSDSGIYTC 227 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~--g~p~p~i~W~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 227 (369)
..+.+.+|++++|.|... +.+.+.|.|++ ++..+......... ....++.+. .++.|.|.+++.+|+|.|.|
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~---~ngsL~I~~v~~~DsG~Y~c 83 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLF---KNGTLKIKHLKTDDQDIYKV 83 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEEC---TTSCEEECSCCGGGCEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEEC---CCCCEEECCCChhhCEEEEE
Confidence 456788999999999553 35567899999 77665432111000 012233322 34689999999999999999
Q ss_pred EEEeCCceEE--EEEEEEEeec
Q psy12695 228 RAKNGAGEVF--TNISLNVIKV 247 (369)
Q Consensus 228 ~a~n~~g~~~--~~~~l~v~~~ 247 (369)
.+.|..|... ..+.|.|...
T Consensus 84 ~~~n~~g~~~~~~~~~L~V~~~ 105 (182)
T 1hnf_A 84 SIYDTKGKNVLEKIFDLKIQER 105 (182)
T ss_dssp EEEETTSCEEEEEEEEEEEECC
T ss_pred EEEeCCCceeEEEEEEEEEcCc
Confidence 9999988753 4667777754
No 449
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.53 E-value=9.9e-08 Score=72.87 Aligned_cols=94 Identities=13% Similarity=0.186 Sum_probs=60.5
Q ss_pred CCCeeeccCCeEEEEEEeeCC---CCCeEEEEeCC--e---Eeee-ccccc--c-cCCcceEEEE--eecceeeEEEccc
Q psy12695 152 TPDVTAEENENVTLSCRATGS---PVPKIKWIFKE--K---IIAN-ISSGL--A-NMNKRQYIIK--TINSLSNLTIVAV 217 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~---p~p~i~W~~~~--~---~~~~-~~~~~--~-~~~~~~~~~~--~~~~~~~L~I~~v 217 (369)
+..+.+.+|++++|.|.+.+. ....+.|++.. . .+.. ..... . .....+|.+. .......|.|.++
T Consensus 7 p~~v~v~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~ 86 (126)
T 2h32_A 7 PPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISEL 86 (126)
T ss_dssp CSEEEEETTCCEEEEEEECTTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCCEEEEEEecCCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEeCCCCeEEEEECCC
Confidence 456889999999999999764 24579999853 1 1221 11110 0 0113456554 2345678999999
Q ss_pred CCCCCEEEEEEEEeCCceEEEEEEEEEe
Q psy12695 218 TMSDSGIYTCRAKNGAGEVFTNISLNVI 245 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~g~~~~~~~l~v~ 245 (369)
+.+|+|.|.|.+.+..+.......|.|.
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~t~l~v~ 114 (126)
T 2h32_A 87 QPEDEAMYYCAMGARSSEKEEREREWEE 114 (126)
T ss_dssp CGGGCEEEEEEEECSCCCCCCTTCC---
T ss_pred ChhHCEEEEEEEEcCCCCcceeEEEeec
Confidence 9999999999998877655444445443
No 450
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.52 E-value=1.6e-07 Score=82.24 Aligned_cols=85 Identities=18% Similarity=0.262 Sum_probs=57.6
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEee-cceeeEEEcccCCCCCEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTI-NSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~ 224 (369)
|.|......+.+.+|+.++|.|.+.|. +.|++++..+.. +...... ...+.|.|.+++.+|+|.
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~-----------~~~~~~~~~~~~~L~i~~~~~~D~G~ 65 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQ-----------EMAKAQDGTFSSVLTLTNLTGLDTGE 65 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSE-----------EEEECTTSCEEEEEEECSCCGGGCEE
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCccc-----------ceeccCCCceeEEEEEccCChhhCEE
Confidence 445555667889999999999999875 999999876521 1110000 114689999999999999
Q ss_pred EEEEEEeCCce---EEEEEEEEEe
Q psy12695 225 YTCRAKNGAGE---VFTNISLNVI 245 (369)
Q Consensus 225 Y~C~a~n~~g~---~~~~~~l~v~ 245 (369)
|+|.|.|..|. ....+.+.|.
T Consensus 66 Y~C~a~n~~g~~~~~~~~~~v~v~ 89 (289)
T 3mjg_X 66 YFCTHNDSRGLETDERKRLYIFVP 89 (289)
T ss_dssp EEEECCC------CCCEEEEEECC
T ss_pred EEEEEcccCCCCcCcEEeEEEEEE
Confidence 99999998876 2334444444
No 451
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.52 E-value=2.5e-07 Score=79.36 Aligned_cols=82 Identities=17% Similarity=0.290 Sum_probs=55.8
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCC--CCeEEEEeC--CeEeeec---c--cc---cccCCcceEEEEee--cceeeEEEc
Q psy12695 150 PITPDVTAEENENVTLSCRATGSP--VPKIKWIFK--EKIIANI---S--SG---LANMNKRQYIIKTI--NSLSNLTIV 215 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~~~~~~---~--~~---~~~~~~~~~~~~~~--~~~~~L~I~ 215 (369)
..+....+.+|+.++|.|.+.+.+ .+.+.|+++ +..+... . .. .......++.+... .....|.|.
T Consensus 136 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 215 (250)
T 3esu_F 136 QQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLS 215 (250)
T ss_dssp EECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred ecCCceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEEC
Confidence 345667899999999999999877 788999986 3322111 0 00 00011234444322 345579999
Q ss_pred ccCCCCCEEEEEEEEe
Q psy12695 216 AVTMSDSGIYTCRAKN 231 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n 231 (369)
+++.+|+|.|.|.+.+
T Consensus 216 ~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 216 SLTSVDSAVYFCARSG 231 (250)
T ss_dssp SCCGGGCEEEEEEEEC
T ss_pred CCCcccCEEEEEEEec
Confidence 9999999999999997
No 452
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.52 E-value=4.6e-08 Score=87.45 Aligned_cols=92 Identities=14% Similarity=0.091 Sum_probs=70.8
Q ss_pred ceEEEecCCCCCccCC-CCCCCccEEEeecceeChhhccCCcccCeeeccCCcccccCCcccccccccccccccccceec
Q psy12695 47 KETVLCKAKNFTTIPE-QLDVGTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~-~~~~~~~~L~l~~n~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~ 125 (369)
.+.++.+++.++.++. .-...++.|+|++|+|.. +...++|+.|+|++|+|+.++... +++|+.|+|++|.|+.
T Consensus 60 L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~--l~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~ 134 (317)
T 3o53_A 60 LELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQE--LLVGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITM 134 (317)
T ss_dssp CCEEECTTSCCEEEEEETTCTTCCEEECCSSEEEE--EEECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCS
T ss_pred CCEEECCCCcCCcchhhhhcCCCCEEECcCCcccc--ccCCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCC
Confidence 5788999998886554 124578999999999763 234588999999999999887665 4678999999999999
Q ss_pred ccCCcccccCcCcccccc
Q psy12695 126 ITHEAFINVPKLNLEDFA 143 (369)
Q Consensus 126 ~~~~~f~~l~~l~~~~~~ 143 (369)
+.+..|..+++|...++.
T Consensus 135 ~~~~~~~~l~~L~~L~Ls 152 (317)
T 3o53_A 135 LRDLDEGCRSRVQYLDLK 152 (317)
T ss_dssp GGGBCTGGGSSEEEEECT
T ss_pred ccchhhhccCCCCEEECC
Confidence 988888877776554443
No 453
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.52 E-value=2.2e-07 Score=82.25 Aligned_cols=97 Identities=21% Similarity=0.307 Sum_probs=62.5
Q ss_pred CCCeeeccCCeEEEEEEeeCC-CCCeEEEEeCCeEeee----cccc--cc--cCCcceEEE-EeecceeeEEEcccCCCC
Q psy12695 152 TPDVTAEENENVTLSCRATGS-PVPKIKWIFKEKIIAN----ISSG--LA--NMNKRQYII-KTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~~~~----~~~~--~~--~~~~~~~~~-~~~~~~~~L~I~~v~~~D 221 (369)
+.++++.+|++++|.|.+.+. +.+.|.|++.+..... .... .. .....+... ......+.|.|.+++.+|
T Consensus 6 ~p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 85 (308)
T 4fom_A 6 EPHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSD 85 (308)
T ss_dssp CCSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGG
T ss_pred CCEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHH
Confidence 347889999999999998654 4456999986532111 0000 00 000112211 112245689999999999
Q ss_pred CEEEEEEEEeC-CceEEEEEEEEEeecC
Q psy12695 222 SGIYTCRAKNG-AGEVFTNISLNVIKVE 248 (369)
Q Consensus 222 ~G~Y~C~a~n~-~g~~~~~~~l~v~~~~ 248 (369)
+|.|+|.|.|. .|.....+.+.+...+
T Consensus 86 ~G~Y~C~a~n~~~~~~~~~~~~~v~~~~ 113 (308)
T 4fom_A 86 SGKYICKAVTFPLGNAQSSTTVTVLVEP 113 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEEEEEBCC
T ss_pred CEEEEEEEeeCCCcceeeeeEEEeeecc
Confidence 99999999886 5667777777776554
No 454
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.52 E-value=1.4e-07 Score=84.01 Aligned_cols=77 Identities=29% Similarity=0.281 Sum_probs=34.8
Q ss_pred eEEEecCCCCCccCCCC--CCCccEEEeecceeCh-hhccCCcccCeeeccCCcccccCCccccccccccccccccccee
Q psy12695 48 ETVLCKAKNFTTIPEQL--DVGTQVLDLSDNFLDR-YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQ 124 (369)
Q Consensus 48 ~~~~c~~~~l~~ip~~~--~~~~~~L~l~~n~i~~-~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~ 124 (369)
+.++.+++.++.+|. + ...++.|+|++|+|.. ..|.++++|+.|+|++|+|+.+++ |..+++|+.|+|++|.++
T Consensus 66 ~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 142 (308)
T 1h6u_A 66 IGLELKDNQITDLAP-LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQIT 142 (308)
T ss_dssp CEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEECTTSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred CEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCchhhcCCCCCCEEECCCCCCCCchh--hcCCCCCCEEECCCCccC
Confidence 344555555444443 2 1234455555554331 234444444444444444444432 444444444444444444
Q ss_pred ccc
Q psy12695 125 KIT 127 (369)
Q Consensus 125 ~~~ 127 (369)
.++
T Consensus 143 ~~~ 145 (308)
T 1h6u_A 143 NIS 145 (308)
T ss_dssp CCG
T ss_pred cCc
Confidence 443
No 455
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=98.52 E-value=1.1e-07 Score=72.03 Aligned_cols=78 Identities=22% Similarity=0.335 Sum_probs=53.9
Q ss_pred CCCCeeeccCCeEEEEEEeeCCC----CCeEEEEeCC----eEeeecccccccCCcceEEEEe-----ecceeeEEEccc
Q psy12695 151 ITPDVTAEENENVTLSCRATGSP----VPKIKWIFKE----KIIANISSGLANMNKRQYIIKT-----INSLSNLTIVAV 217 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p----~p~i~W~~~~----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~L~I~~v 217 (369)
.|..+.+.+|++++|.|.+.+.+ .+.+.|+++. ..+... .. ....++.... ......|.|.++
T Consensus 13 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~---~~-~~~~R~~~~~~~~~~~~~~~sL~I~~v 88 (120)
T 3noi_A 13 QPPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNG---TP-EFRGRLAPLASSRFLHDHQAELHIRDV 88 (120)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTT---CT-TTTTCEECCCHHHHHTTCBCCEEESSC
T ss_pred CCCEEEEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceeccc---cc-ccCCcEEeecccccccCCcEEEEEecC
Confidence 35678899999999999998765 4579999975 222110 00 1122333321 234568999999
Q ss_pred CCCCCEEEEEEEEeC
Q psy12695 218 TMSDSGIYTCRAKNG 232 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~ 232 (369)
+.+|+|.|.|.+...
T Consensus 89 ~~~DsG~Y~C~v~~~ 103 (120)
T 3noi_A 89 RGHDASIYVCRVEVL 103 (120)
T ss_dssp CGGGCEEEEEEEEET
T ss_pred ChhhCEEEEEEEEEC
Confidence 999999999999754
No 456
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.52 E-value=4.3e-08 Score=80.16 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=51.5
Q ss_pred CeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCC
Q psy12695 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGA 233 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 233 (369)
...+.+|+.++|.|.+.+.| +.+.|++++..+.... . .....+.|.|.+++.+|+|.|.|.|.|..
T Consensus 102 ~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~---------~----~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 167 (184)
T 2gi7_A 102 GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKN---------P----ERWYRASFPIITVTAAHSGTYRCYSFSSR 167 (184)
T ss_dssp CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCC---------C----CEEEEESSSEEEETTCCSEEEEEEEECTT
T ss_pred CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCccee---------c----CCCceEEEEEccCCccCCeEEEEEEEeCC
Confidence 45678999999999987665 6999999986543210 0 11235689999999999999999999975
Q ss_pred c
Q psy12695 234 G 234 (369)
Q Consensus 234 g 234 (369)
+
T Consensus 168 ~ 168 (184)
T 2gi7_A 168 D 168 (184)
T ss_dssp S
T ss_pred C
Confidence 4
No 457
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.51 E-value=3.5e-07 Score=87.63 Aligned_cols=92 Identities=15% Similarity=0.244 Sum_probs=64.6
Q ss_pred CCCCeeeccCCeEEEEEEee-CCCCCeEEEEeCCeEeeecccccccCCcceEEE-EeecceeeEEEcccCCCCCEEEEEE
Q psy12695 151 ITPDVTAEENENVTLSCRAT-GSPVPKIKWIFKEKIIANISSGLANMNKRQYII-KTINSLSNLTIVAVTMSDSGIYTCR 228 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~ 228 (369)
.+....+.+|+.+.|.|.+. |.|.|.|.|++++..+........ ..+.. ......+.|.|.+++.+|+|.|+|.
T Consensus 233 ~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~----~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 308 (527)
T 3qs9_E 233 TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEM----STYSTNRTMIRILFAFVSSVARNDTGYYTCS 308 (527)
T ss_dssp SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEE----EEEETTTEEEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeee----eeeccCcceeeEEEEEEccCCcccCeEEEEE
Confidence 45678889999999999996 999999999999876542110000 00000 0011245799999999999999999
Q ss_pred EEeCCceEEEEEEEEEeecCC
Q psy12695 229 AKNGAGEVFTNISLNVIKVET 249 (369)
Q Consensus 229 a~n~~g~~~~~~~l~v~~~~~ 249 (369)
|.|. ....+.|.|...+.
T Consensus 309 a~N~---~~~~~~L~V~~~p~ 326 (527)
T 3qs9_E 309 SSKH---PSQSALVTIVEKGF 326 (527)
T ss_dssp ETTE---EEEEEEEEEC--CE
T ss_pred EEeC---CCceEEEEEEccCc
Confidence 9988 56777888876553
No 458
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.51 E-value=1.2e-07 Score=84.52 Aligned_cols=79 Identities=16% Similarity=0.110 Sum_probs=51.3
Q ss_pred ceEEEecCCCCC-ccCCCC----CCCccEEEeecceeCh-------hhccCCcccCeeeccCCcccccCCcccccccccc
Q psy12695 47 KETVLCKAKNFT-TIPEQL----DVGTQVLDLSDNFLDR-------YTFRKLINLVELDLSYNQIQFVPSHILDSILELR 114 (369)
Q Consensus 47 ~~~~~c~~~~l~-~ip~~~----~~~~~~L~l~~n~i~~-------~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~ 114 (369)
.+.++.+++++. .+|..+ ...++.|+|++|+|.. ..|.++++|+.|+|++|+|+.+++..|..+++|+
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 172 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALT 172 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCC
Confidence 445666677666 344433 3456777777777653 3445677777777777777777777777777777
Q ss_pred cccccccceec
Q psy12695 115 ELKLSGNPIQK 125 (369)
Q Consensus 115 ~L~L~~N~l~~ 125 (369)
.|+|++|++..
T Consensus 173 ~L~Ls~N~l~~ 183 (310)
T 4glp_A 173 SLDLSDNPGLG 183 (310)
T ss_dssp EEECCSCTTCH
T ss_pred EEECCCCCCcc
Confidence 77777776544
No 459
>2ol3_A BM3.3 T-cell receptor alpha-chain; T cell receptor, class I MHC, H-2KBM8, TCR-PMHC complex, IMM system; HET: NAG; 2.90A {Mus musculus} SCOP: b.1.1.1
Probab=98.51 E-value=5.1e-07 Score=70.40 Aligned_cols=83 Identities=18% Similarity=0.290 Sum_probs=56.2
Q ss_pred cCCCCCeeeccCCeEEEEEEeeCCC-CCeEEEEeCC--e---Eeeecc-cccccCCcceEEEE--eecceeeEEEcccCC
Q psy12695 149 RPITPDVTAEENENVTLSCRATGSP-VPKIKWIFKE--K---IIANIS-SGLANMNKRQYIIK--TINSLSNLTIVAVTM 219 (369)
Q Consensus 149 ~~~~~~~~~~~G~~~~l~C~~~g~p-~p~i~W~~~~--~---~~~~~~-~~~~~~~~~~~~~~--~~~~~~~L~I~~v~~ 219 (369)
...+..+.+.+|++++|.|.+.+.. ...+.|+++. . .+.... .........+|.+. .......|+|.+++.
T Consensus 4 ~Q~p~~v~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~ 83 (142)
T 2ol3_A 4 TQTQTSISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQI 83 (142)
T ss_dssp BCCCSEEEEETTCCEEECCBCCCCCSSCEEEEEEECTTCCEEEEEEEETTCSSCCEETTEEECCBGGGTBCCEEECSCCT
T ss_pred EecCCeEEEecCCCEEEEEEecCCcCCceEEEEEeCCCCCcEEEEEECCCCcccccCCCEEEEecCCCCEEEEEECCCCh
Confidence 3446778999999999999987655 4579999853 2 111111 11111123455552 234456899999999
Q ss_pred CCCEEEEEEEEe
Q psy12695 220 SDSGIYTCRAKN 231 (369)
Q Consensus 220 ~D~G~Y~C~a~n 231 (369)
+|+|.|.|.+.+
T Consensus 84 ~Dsg~Y~C~~~~ 95 (142)
T 2ol3_A 84 EDSAVYFCAMRG 95 (142)
T ss_dssp TTCEEEEEEEEC
T ss_pred hhCEEEEEEEEc
Confidence 999999999986
No 460
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.51 E-value=4.9e-07 Score=74.66 Aligned_cols=77 Identities=16% Similarity=0.303 Sum_probs=52.6
Q ss_pred ccCCeEEEEEEee-CCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecce-eeEEEcccCCCCCEEEEEEEEeCCce
Q psy12695 158 EENENVTLSCRAT-GSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSL-SNLTIVAVTMSDSGIYTCRAKNGAGE 235 (369)
Q Consensus 158 ~~G~~~~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~L~I~~v~~~D~G~Y~C~a~n~~g~ 235 (369)
..|+.+.|.|.+. |.|.|.|.|++++..+..... .+......+. ....+..+..+|.|.|+|.|.|..|.
T Consensus 119 ~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~--------~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~ 190 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEPHLSWLENGEELNAINT--------TVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLR 190 (201)
T ss_dssp SSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEE--------EEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCC
T ss_pred CCCCeEEEEEecCCccCCCEEEEEECCEECccccc--------eEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcce
Confidence 5588999999995 999999999999876653211 1111000011 11233455678999999999999999
Q ss_pred EEEEEEE
Q psy12695 236 VFTNISL 242 (369)
Q Consensus 236 ~~~~~~l 242 (369)
.++.+.+
T Consensus 191 ~s~~~~~ 197 (201)
T 1dr9_A 191 VNQTFNW 197 (201)
T ss_dssp EEEEEEE
T ss_pred eeeEEec
Confidence 8877654
No 461
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.51 E-value=1.4e-07 Score=80.23 Aligned_cols=99 Identities=16% Similarity=0.137 Sum_probs=61.3
Q ss_pred cCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeC--CeE---eeecccccc---cCCcceEEEEe-ecceeeEEEcccCC
Q psy12695 149 RPITPDVTAEENENVTLSCRATGSPVPKIKWIFK--EKI---IANISSGLA---NMNKRQYIIKT-INSLSNLTIVAVTM 219 (369)
Q Consensus 149 ~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~--~~~---~~~~~~~~~---~~~~~~~~~~~-~~~~~~L~I~~v~~ 219 (369)
...|..+.+.+|++++|.|. .+.|.+.+.|+++ +.. +........ .....++.+.. ......|.|.+++.
T Consensus 4 ~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~ 82 (238)
T 2p1y_A 4 TQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATP 82 (238)
T ss_dssp EEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCG
T ss_pred eECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCc
Confidence 34467788999999999999 7889999999985 211 111000000 00122333332 22356899999999
Q ss_pred CCCEEEEEEEEeCCceE-----EEEEEEEEeecC
Q psy12695 220 SDSGIYTCRAKNGAGEV-----FTNISLNVIKVE 248 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~g~~-----~~~~~l~v~~~~ 248 (369)
+|+|.|.|.+.|..|.. .....|.|...+
T Consensus 83 ~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~ 116 (238)
T 2p1y_A 83 SQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSA 116 (238)
T ss_dssp GGCEEEEEEEEC------CEEECCCEEEEEECCC
T ss_pred ccCeeEEEEEEeCCCccccceeCCCeEEEEeccC
Confidence 99999999999886521 123466665543
No 462
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=98.51 E-value=1.1e-06 Score=66.78 Aligned_cols=99 Identities=21% Similarity=0.263 Sum_probs=62.8
Q ss_pred cCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--e---Eeeeccc-cc--ccCCcceEEEEe-ecceeeEEEcccCC
Q psy12695 149 RPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--K---IIANISS-GL--ANMNKRQYIIKT-INSLSNLTIVAVTM 219 (369)
Q Consensus 149 ~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~---~~~~~~~-~~--~~~~~~~~~~~~-~~~~~~L~I~~v~~ 219 (369)
...|..+.+.+|++++|.|.+.......+.|++.. . .+..... .. ......++.+.. ......|+|.+++.
T Consensus 9 ~Q~p~~~~v~~G~~vtL~C~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~Rf~~~~~~~~~~sL~I~~~~~ 88 (125)
T 3r8b_B 9 TQSPRNKVAVTGEKVTLSCKQTNSYFNNMYWYRQDTGHELRLIFMSHGIRNVEKGDIPDGYKASRPSQENFSLILELATP 88 (125)
T ss_dssp EEECSEEEEETTCCEEEEEEEESCCCSEEEEEEECTTSCEEEEEEESSTTCCEECSSCTTCEEEEEETTEEEEEETTCCG
T ss_pred EecCCeEEEcCCCcEEEEEEECCCCCCeEEEEEECCCCCcEEEEEEcCCccccCCCCCCceEEEecCCCEEEEEECCCCh
Confidence 34466788999999999999987665689999842 1 1211111 00 011123444432 24577899999999
Q ss_pred CCCEEEEEEEEeCCceEE-EEEEEEEeec
Q psy12695 220 SDSGIYTCRAKNGAGEVF-TNISLNVIKV 247 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~g~~~-~~~~l~v~~~ 247 (369)
+|+|.|.|.+.+...... ....|.|...
T Consensus 89 ~Dsg~Y~C~~~~~~~~~fg~GT~l~V~~~ 117 (125)
T 3r8b_B 89 SQTSVYFCASGGGGTLYFGAGTRLSVLYG 117 (125)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEEBC
T ss_pred hhCEEEEEEEcCCCCcEECCCEEEEEeec
Confidence 999999999976532222 2245555543
No 463
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.50 E-value=3.2e-07 Score=80.42 Aligned_cols=98 Identities=18% Similarity=0.244 Sum_probs=64.0
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCC--CCeEEEEeCC--eE---eeeccc-c----cccCCcceEEEEe--ecceeeEEEc
Q psy12695 150 PITPDVTAEENENVTLSCRATGSP--VPKIKWIFKE--KI---IANISS-G----LANMNKRQYIIKT--INSLSNLTIV 215 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~---~~~~~~-~----~~~~~~~~~~~~~--~~~~~~L~I~ 215 (369)
..|..+.+.+|++++|.|.+.|.+ .+.+.|++++ .. +..... . .......++.+.. ......|.|.
T Consensus 31 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 110 (282)
T 1qok_A 31 QQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLS 110 (282)
T ss_dssp EECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEEC
Confidence 346678899999999999999875 5789999864 11 111000 0 0000123444433 2245789999
Q ss_pred ccCCCCCEEEEEEEEeCCc---e--EEEEEEEEEeec
Q psy12695 216 AVTMSDSGIYTCRAKNGAG---E--VFTNISLNVIKV 247 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~~g---~--~~~~~~l~v~~~ 247 (369)
+++.+|+|.|.|.+.|..| . ....+.|.|...
T Consensus 111 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~ 147 (282)
T 1qok_A 111 SLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSG 147 (282)
T ss_dssp SCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC-
T ss_pred cCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecC
Confidence 9999999999999999876 1 123356777654
No 464
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.50 E-value=4.6e-07 Score=91.44 Aligned_cols=96 Identities=28% Similarity=0.378 Sum_probs=72.6
Q ss_pred CCeeeccCCeEEEEEEeeCCCCC-eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 153 PDVTAEENENVTLSCRATGSPVP-KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
....+.+|+.++|.|.+.+.+.+ .+.|++++..+..... ..........+.|.|.++..+|+|.|+|.|.|
T Consensus 627 ~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~--------~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 698 (816)
T 3dmk_A 627 EEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLG--------ITTSRVGRRGSVLTIEAVEASHAGNFTCHARN 698 (816)
T ss_dssp CSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGT--------CEEEEETTTEEEEEEESCCGGGCEEEEEEEEC
T ss_pred cccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCC--------eeEEEcCCCeeEEEEccCChhhCEEEEEEEEe
Confidence 45678899999999999876655 8999999876642111 11111223457899999999999999999999
Q ss_pred CCceEEEEEEEEEeecCCcccCCCC
Q psy12695 232 GAGEVFTNISLNVIKVETAVAQPDP 256 (369)
Q Consensus 232 ~~g~~~~~~~l~v~~~~~~~~~~~~ 256 (369)
..|.....+.|.|..+|.....+..
T Consensus 699 ~~g~~~~~~~l~V~~~P~~~~~~~~ 723 (816)
T 3dmk_A 699 LAGHQQFTTPLNVYVPPRWILEPTD 723 (816)
T ss_dssp SSCEEEEEEEECEEEEEEEEECCCC
T ss_pred CCccEEEEEEEEEEeCCceeeeccc
Confidence 9999999999999877755444433
No 465
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.50 E-value=4.8e-09 Score=87.10 Aligned_cols=91 Identities=24% Similarity=0.285 Sum_probs=61.0
Q ss_pred ceEEEecCCCCCccCCCCC--CCccEEEeecceeC--hhhccCCcccCeeeccCCcccccCCcccccccccccccccccc
Q psy12695 47 KETVLCKAKNFTTIPEQLD--VGTQVLDLSDNFLD--RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~~--~~~~~L~l~~n~i~--~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~ 122 (369)
.+.++.++++++.+| .+. ..++.|+|++|+|. +..+..+++|+.|+|++|+|+.++ .|..+++|+.|+|++|.
T Consensus 50 L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~l~--~~~~l~~L~~L~l~~N~ 126 (198)
T 1ds9_A 50 CKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLS--GIEKLVNLRVLYMSNNK 126 (198)
T ss_dssp CSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCCHH--HHHHHHHSSEEEESEEE
T ss_pred CCEEECCCCCCcccc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCcCC--ccccCCCCCEEECCCCc
Confidence 456777777777776 442 56777777777766 334556677777777777777775 46777777777777777
Q ss_pred eecccC-CcccccCcCccc
Q psy12695 123 IQKITH-EAFINVPKLNLE 140 (369)
Q Consensus 123 l~~~~~-~~f~~l~~l~~~ 140 (369)
|+.++. ..|..+++|...
T Consensus 127 i~~~~~~~~l~~l~~L~~L 145 (198)
T 1ds9_A 127 ITNWGEIDKLAALDKLEDL 145 (198)
T ss_dssp CCCHHHHHHHTTTTTCSEE
T ss_pred CCchhHHHHHhcCCCCCEE
Confidence 776654 345555554443
No 466
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.50 E-value=2.4e-07 Score=77.61 Aligned_cols=94 Identities=22% Similarity=0.288 Sum_probs=62.1
Q ss_pred CCCeeeccCCeEEEEEEeeCC--CCCeEEEEeCC--eE---eeecccc-c---ccCCcceEEEEeecceeeEEEcccCCC
Q psy12695 152 TPDVTAEENENVTLSCRATGS--PVPKIKWIFKE--KI---IANISSG-L---ANMNKRQYIIKTINSLSNLTIVAVTMS 220 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~--p~p~i~W~~~~--~~---~~~~~~~-~---~~~~~~~~~~~~~~~~~~L~I~~v~~~ 220 (369)
+..+.+.+|++++|.|.+.+. +.+.+.|++.. .. +...... . ......++.+........|.|.+++.+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 85 (215)
T 3nl4_H 6 SGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTE 85 (215)
T ss_dssp ECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGG
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcc
Confidence 456789999999999999874 36789999743 11 1111000 0 001123555544555668999999999
Q ss_pred CCEEEEEEEEeCCce----EEEEEEEEEe
Q psy12695 221 DSGIYTCRAKNGAGE----VFTNISLNVI 245 (369)
Q Consensus 221 D~G~Y~C~a~n~~g~----~~~~~~l~v~ 245 (369)
|+|.|.|.+.|..+. ....+.|.|.
T Consensus 86 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~ 114 (215)
T 3nl4_H 86 DTATYFCVRKYGSEWGGDLWGPGTLVTVS 114 (215)
T ss_dssp GCEEEEEEEECSSSSCEEEECCCEEEEEC
T ss_pred cCEEEEEEEecCCCccceEEcCCEEEEEe
Confidence 999999999988652 3333566665
No 467
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.50 E-value=6.8e-08 Score=86.11 Aligned_cols=78 Identities=19% Similarity=0.174 Sum_probs=44.9
Q ss_pred ceEEEecCCCCC-ccCCCC----CCCccEEEeecceeC--hhhccCC-----cccCeeeccCCcccccCCcccccccccc
Q psy12695 47 KETVLCKAKNFT-TIPEQL----DVGTQVLDLSDNFLD--RYTFRKL-----INLVELDLSYNQIQFVPSHILDSILELR 114 (369)
Q Consensus 47 ~~~~~c~~~~l~-~ip~~~----~~~~~~L~l~~n~i~--~~~f~~l-----~~L~~L~Ls~N~l~~i~~~~f~~l~~L~ 114 (369)
.+.++.++++++ .+|..+ ...++.|+|++|+|. +..|.++ ++|++|+|++|+|+.+++..|..+++|+
T Consensus 97 L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 176 (312)
T 1wwl_A 97 LQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALS 176 (312)
T ss_dssp CCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCC
T ss_pred ccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCC
Confidence 445666666665 455543 235666666666654 2344444 5666666666666666656666666666
Q ss_pred ccccccccee
Q psy12695 115 ELKLSGNPIQ 124 (369)
Q Consensus 115 ~L~L~~N~l~ 124 (369)
.|+|++|++.
T Consensus 177 ~L~Ls~N~l~ 186 (312)
T 1wwl_A 177 TLDLSDNPEL 186 (312)
T ss_dssp EEECCSCTTC
T ss_pred EEECCCCCcC
Confidence 6666666543
No 468
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.50 E-value=1.4e-07 Score=76.80 Aligned_cols=82 Identities=16% Similarity=0.224 Sum_probs=55.6
Q ss_pred CCeeeccCCeEEEEEEeeCCCCCeEEEEeCCeEeeec-ccccc----cCCcceEEEEe---ecceeeEEEcccCCCCCEE
Q psy12695 153 PDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANI-SSGLA----NMNKRQYIIKT---INSLSNLTIVAVTMSDSGI 224 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-~~~~~----~~~~~~~~~~~---~~~~~~L~I~~v~~~D~G~ 224 (369)
..+.+.+|+.+.|.|.+.+.|.+.+.|++++...... ..... .....++.... ..+...|.|.+++.+|+|.
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~ 82 (184)
T 2ny1_B 3 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 82 (184)
T ss_dssp CEEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEE
T ss_pred CcEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEE
Confidence 3467899999999999999999999999988632211 00000 00011222111 1224569999999999999
Q ss_pred EEEEEEeCCc
Q psy12695 225 YTCRAKNGAG 234 (369)
Q Consensus 225 Y~C~a~n~~g 234 (369)
|.|.+.|..|
T Consensus 83 Y~C~~~~~~~ 92 (184)
T 2ny1_B 83 YICEVEDQKE 92 (184)
T ss_dssp EEEEETTEEE
T ss_pred EEEEEEcCCC
Confidence 9999988765
No 469
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.50 E-value=5.5e-07 Score=77.93 Aligned_cols=79 Identities=18% Similarity=0.260 Sum_probs=59.9
Q ss_pred eeeccCCeEEEEEEeeC-CCCC--eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEccc---CCCCCEE--EE
Q psy12695 155 VTAEENENVTLSCRATG-SPVP--KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAV---TMSDSGI--YT 226 (369)
Q Consensus 155 ~~~~~G~~~~l~C~~~g-~p~p--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v---~~~D~G~--Y~ 226 (369)
..+.+|+.++|.|.+.| .|.| .+.|++++..+... + ......+.+..+ +.+|+|. |+
T Consensus 13 ~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~-------------~--~~~~~~~~~~~~~~~~~~d~g~g~Y~ 77 (265)
T 2oz4_A 13 RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPT-------------V--TYGNDSFSAKASVSVTAEDEGTQRLT 77 (265)
T ss_dssp SEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCCE-------------E--EECSSEEEEEEEEEECGGGCEEEEEE
T ss_pred ceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCce-------------E--eeCCCeEEEEeecccccccCCcceEE
Confidence 46889999999999998 7877 99999999765420 0 011224444444 7788885 99
Q ss_pred EEEEeCCceEEEEEEEEEeecC
Q psy12695 227 CRAKNGAGEVFTNISLNVIKVE 248 (369)
Q Consensus 227 C~a~n~~g~~~~~~~l~v~~~~ 248 (369)
|.+.|..|.....+.|.|...+
T Consensus 78 C~a~n~~~~~~~~~~l~V~~~p 99 (265)
T 2oz4_A 78 CAVILGNQSQETLQTVTIYSFP 99 (265)
T ss_dssp EEEEETTEEEEEEEEEEEECCC
T ss_pred EEEecCCCCcEEEEEEEEeCCC
Confidence 9999999998888999997644
No 470
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.50 E-value=6.9e-08 Score=81.23 Aligned_cols=99 Identities=17% Similarity=0.203 Sum_probs=65.2
Q ss_pred CCCCeeeccCCeEEEEEEeeC-CCCCe----EEEEeCCeEeee----cccccccCCcceEEEEe-----ecceeeEEEcc
Q psy12695 151 ITPDVTAEENENVTLSCRATG-SPVPK----IKWIFKEKIIAN----ISSGLANMNKRQYIIKT-----INSLSNLTIVA 216 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g-~p~p~----i~W~~~~~~~~~----~~~~~~~~~~~~~~~~~-----~~~~~~L~I~~ 216 (369)
.+..+.+.+|+.+.|.|.+.+ .+.+. +.|++++....- ...........++.+.. ..+...|.|.+
T Consensus 5 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 84 (221)
T 3eow_R 5 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFG 84 (221)
T ss_dssp CCCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCC
T ss_pred CCCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEcc
Confidence 356788899999999999954 44444 999998642110 00000000012222221 22466899999
Q ss_pred cCCCCCEEEEEEEEeCC-ceEEEEEEEEEeecCC
Q psy12695 217 VTMSDSGIYTCRAKNGA-GEVFTNISLNVIKVET 249 (369)
Q Consensus 217 v~~~D~G~Y~C~a~n~~-g~~~~~~~l~v~~~~~ 249 (369)
++.+|+|.|.|.+.+.. |.....+.|.|...|.
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~ 118 (221)
T 3eow_R 85 LRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQ 118 (221)
T ss_dssp SSCCCCSCBEEEEEESSSCSCEEECCCCCCCCCE
T ss_pred CChHHCeEEEEEEEeCCCCceEEEEEEEEEECCC
Confidence 99999999999999976 7777778887776543
No 471
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.50 E-value=8.4e-08 Score=80.57 Aligned_cols=82 Identities=21% Similarity=0.253 Sum_probs=53.6
Q ss_pred CeeeccCCeEEEEEEeeC-CCCC-eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 154 DVTAEENENVTLSCRATG-SPVP-KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g-~p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
...+.+|+.++|.|.+.| .|.| .|.|++++..+........... ..+. ..+.|.|.. ...|.|.|+|.|.|
T Consensus 133 ~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~-~~~~-----~~s~L~i~~-~~~d~g~Y~C~a~n 205 (219)
T 1c1e_H 133 GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQS-DLYT-----LSSSVTVPS-SPRPSETVTCNVAH 205 (219)
T ss_dssp CSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEESS-SCEE-----EEEEEEEES-SSTTTSCCEEEEEE
T ss_pred ccccccCCeEEEEEEcccccCCCeEEEEEeCCcccceEecCCcccC-CeEE-----EEEEEEEec-ccCCCCEEEEEEEe
Confidence 345678999999999998 8999 9999998865321111000000 1111 135788844 44466999999999
Q ss_pred CCceEEEEEEE
Q psy12695 232 GAGEVFTNISL 242 (369)
Q Consensus 232 ~~g~~~~~~~l 242 (369)
..|.......+
T Consensus 206 ~~~~~~~~~~i 216 (219)
T 1c1e_H 206 PASSTKVDKKI 216 (219)
T ss_dssp GGGTEEEEEEC
T ss_pred CCCCccEEEec
Confidence 98876554443
No 472
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.50 E-value=8.5e-08 Score=90.97 Aligned_cols=60 Identities=27% Similarity=0.198 Sum_probs=24.4
Q ss_pred CccEEEeecceeC---hhhccCCcccCeeeccCCcccccCCcccc-cccccccccccccceecc
Q psy12695 67 GTQVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILD-SILELRELKLSGNPIQKI 126 (369)
Q Consensus 67 ~~~~L~l~~n~i~---~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~-~l~~L~~L~L~~N~l~~~ 126 (369)
.++.|+|++|+|. +..|.++++|+.|+|++|+|+.+++..|. .+++|+.|+|++|.|+.+
T Consensus 121 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 3444444444432 22344444444444444444443333332 334444444444444433
No 473
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.50 E-value=3.4e-07 Score=76.09 Aligned_cols=97 Identities=14% Similarity=0.149 Sum_probs=60.6
Q ss_pred CCCCeeeccCCeEEEEEEeeCCCCCe---EEEEeCCeEeeecc------cccc---cCCcceEEEE---eecceeeEEEc
Q psy12695 151 ITPDVTAEENENVTLSCRATGSPVPK---IKWIFKEKIIANIS------SGLA---NMNKRQYIIK---TINSLSNLTIV 215 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p~p~---i~W~~~~~~~~~~~------~~~~---~~~~~~~~~~---~~~~~~~L~I~ 215 (369)
.+..+++.+|++++|.|.+.+.|.+. |.|++++....... .... .....++... .....+.|.|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 35678899999999999999988764 89998764321100 0000 0000011110 11234579999
Q ss_pred ccCCCCCEEEEEEEEeCCceEEE-EEEEEEeec
Q psy12695 216 AVTMSDSGIYTCRAKNGAGEVFT-NISLNVIKV 247 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~~g~~~~-~~~l~v~~~ 247 (369)
+++.+|+|.|.|.+.+..+.... ...+.+...
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~ 117 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVLVP 117 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEeee
Confidence 99999999999999887665443 344444433
No 474
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.50 E-value=6.5e-07 Score=75.57 Aligned_cols=95 Identities=17% Similarity=0.270 Sum_probs=63.1
Q ss_pred CCCeeeccCCeEEEEEEeeCCC--CCeEEEEeCC--eEe---eeccc--c-c--ccCCcceEEEEee--cceeeEEEccc
Q psy12695 152 TPDVTAEENENVTLSCRATGSP--VPKIKWIFKE--KII---ANISS--G-L--ANMNKRQYIIKTI--NSLSNLTIVAV 217 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~~---~~~~~--~-~--~~~~~~~~~~~~~--~~~~~L~I~~v 217 (369)
+..+.+.+|++++|.|.+.+.+ .+.+.|+++. ... ..... . . ......++.+... .....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 4567899999999999999877 6789999853 211 11100 0 0 0011234444332 34578999999
Q ss_pred CCCCCEEEEEEEEeCCc-----e---EEEEEEEEEee
Q psy12695 218 TMSDSGIYTCRAKNGAG-----E---VFTNISLNVIK 246 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~g-----~---~~~~~~l~v~~ 246 (369)
+.+|+|.|.|.+.|..| . ....+.|.|..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~ 123 (225)
T 1op3_H 87 RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSP 123 (225)
T ss_dssp CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEES
T ss_pred ChhhCEEEEEEEecCCCccccccceeecCCEEEeccc
Confidence 99999999999999865 2 12345777765
No 475
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.49 E-value=1.6e-07 Score=82.90 Aligned_cols=91 Identities=21% Similarity=0.226 Sum_probs=67.0
Q ss_pred ceEEEecCCCCCccCCCC--CCCccEEEeecceeCh-hhccCCcccCeeeccCCcccccCCcccccccccccccccccce
Q psy12695 47 KETVLCKAKNFTTIPEQL--DVGTQVLDLSDNFLDR-YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPI 123 (369)
Q Consensus 47 ~~~~~c~~~~l~~ip~~~--~~~~~~L~l~~n~i~~-~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l 123 (369)
.+.++++++.++.+|. + ...++.|+|++|+|.. ..|.++++|+.|+|++|+|+.+ ..|..+++|+.|+|++|.|
T Consensus 92 L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~n~i~~~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l 168 (291)
T 1h6t_A 92 LGWLFLDENKVKDLSS-LKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQI 168 (291)
T ss_dssp CCEEECCSSCCCCGGG-GTTCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred CCEEECCCCcCCCChh-hccCCCCCEEECCCCcCCCChhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcc
Confidence 5678888888887765 3 3568888888888663 4577788888888888888877 3577788888888888888
Q ss_pred ecccCCcccccCcCccccc
Q psy12695 124 QKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 124 ~~~~~~~f~~l~~l~~~~~ 142 (369)
+.+++ |..+++|...++
T Consensus 169 ~~~~~--l~~l~~L~~L~L 185 (291)
T 1h6t_A 169 SDIVP--LAGLTKLQNLYL 185 (291)
T ss_dssp CCCGG--GTTCTTCCEEEC
T ss_pred ccchh--hcCCCccCEEEC
Confidence 87765 666666554433
No 476
>3bia_X T-cell immunoglobulin and mucin domain- containing protein 4; beta barrel, immunoglobulin fold, IGV domain, TIM, glycoprotein; HET: TLA; 2.20A {Mus musculus} PDB: 3bi9_X* 3bib_X*
Probab=98.49 E-value=6.9e-07 Score=66.97 Aligned_cols=97 Identities=19% Similarity=0.278 Sum_probs=59.9
Q ss_pred CCCeeeccCCeEEEEEEeeC--CCCCeEEEEeCC-eE------eeecccc-cccCCcceEEEE--eecceeeEEEcccCC
Q psy12695 152 TPDVTAEENENVTLSCRATG--SPVPKIKWIFKE-KI------IANISSG-LANMNKRQYIIK--TINSLSNLTIVAVTM 219 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g--~p~p~i~W~~~~-~~------~~~~~~~-~~~~~~~~~~~~--~~~~~~~L~I~~v~~ 219 (369)
+..+.+.+|++++|.|...+ .....+.|+++. .. +...... .......++.+. .......|+|.+++.
T Consensus 3 ~~~v~~~~G~~vtL~C~~~~~~~~~~~v~W~r~~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 82 (116)
T 3bia_X 3 EDTIIGFLGQPVTLPCHYLSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGKVQFGEVSLTISNTNR 82 (116)
T ss_dssp CEEEEEETTSCEEECCBCTTCCTTTCEEEEEESSCCSSSCTTEEEEECSSSEEEESSTTEEECSCGGGTBCCEEECSCCG
T ss_pred ccEEEEeeCCcEEEEEEeeCCCCCeEEEEEeeecCCCCCCceEEEEECCcccccccCceEEEeccCCCCEEEEEEccCCh
Confidence 35678899999999999873 233469999875 21 1111110 001111233332 233456899999999
Q ss_pred CCCEEEEEEEEeCC--ceEEEEEEEEEeecC
Q psy12695 220 SDSGIYTCRAKNGA--GEVFTNISLNVIKVE 248 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~--g~~~~~~~l~v~~~~ 248 (369)
+|+|.|.|.+.... ......+.|.|...+
T Consensus 83 ~Dsg~Y~C~v~~~~~~~~~~~~v~L~V~~~~ 113 (116)
T 3bia_X 83 GDSGVYCCRIEVPGWFNDVKKNVRLELRRAL 113 (116)
T ss_dssp GGCEEEEEEEECSSSSCCEEEEEEEEEECC-
T ss_pred hHCEEEEEEEEcCCcccceEEEEEEEEecCC
Confidence 99999999997532 233556777776543
No 477
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.49 E-value=5.9e-07 Score=79.40 Aligned_cols=77 Identities=22% Similarity=0.294 Sum_probs=59.1
Q ss_pred CeeeccCCeEEEEEEee-CCCCCeEEEEeCCeEeeecccccccCCcceEEEEee--cceeeEEEcccCCCCCEEEEEEEE
Q psy12695 154 DVTAEENENVTLSCRAT-GSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTI--NSLSNLTIVAVTMSDSGIYTCRAK 230 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~ 230 (369)
...+.+|+.+.|.|.+. +.|.+.+.|++++..+.... ++.+... .....|.|.+++.+|+|.|.|.+.
T Consensus 116 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~---------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 186 (312)
T 2y23_A 116 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGP---------KYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 186 (312)
T ss_dssp EEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSS---------SCEEEEETTTTEEEEEESCCCGGGCEEEEEEEE
T ss_pred ceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCC---------cEEEEEccCCCEEEEEEccCCcccCEeEEEEEE
Confidence 67889999999999998 89999999999998775321 2222221 334569999999999999999998
Q ss_pred eCCceEEEE
Q psy12695 231 NGAGEVFTN 239 (369)
Q Consensus 231 n~~g~~~~~ 239 (369)
|..+.....
T Consensus 187 ~~~~~~~~~ 195 (312)
T 2y23_A 187 DGKATNHST 195 (312)
T ss_dssp SSSCEEEEE
T ss_pred eCCceEEEE
Confidence 765554433
No 478
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.49 E-value=6.1e-08 Score=91.94 Aligned_cols=75 Identities=15% Similarity=0.149 Sum_probs=53.9
Q ss_pred CccEEEeecceeChhhccCCcccCeeeccCCcccccCCcccccccccccccccccceecccCCccc-ccCcCcccc
Q psy12695 67 GTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFI-NVPKLNLED 141 (369)
Q Consensus 67 ~~~~L~l~~n~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~f~-~l~~l~~~~ 141 (369)
.++.|+|++|.|.......+++|+.|+|++|+|+.+++..|..+++|+.|+|++|.|+.+.+..|. .++.|...+
T Consensus 100 ~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 100 SIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CcCEEECcCCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 344444444444444455677888999999999988888888889999999999999887766664 566654443
No 479
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.49 E-value=5.2e-07 Score=78.90 Aligned_cols=101 Identities=19% Similarity=0.299 Sum_probs=65.9
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--eE---eeeccc---ccc--cCCcceEEEEe-ecceeeEEE
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--KI---IANISS---GLA--NMNKRQYIIKT-INSLSNLTI 214 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~---~~~~~~---~~~--~~~~~~~~~~~-~~~~~~L~I 214 (369)
+.+...+..+.+.+|++++|.|.+.+.+.+.+.|++++ .. +..... ... .....++.+.. ......|.|
T Consensus 25 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (279)
T 2wbj_D 25 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTV 104 (279)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEE
T ss_pred ceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEE
Confidence 34445567889999999999999998888899999864 11 111000 000 01123454432 234568999
Q ss_pred cccCCCCCEEEEEEEEeCCc------eEEEEEEEEEee
Q psy12695 215 VAVTMSDSGIYTCRAKNGAG------EVFTNISLNVIK 246 (369)
Q Consensus 215 ~~v~~~D~G~Y~C~a~n~~g------~~~~~~~l~v~~ 246 (369)
.+++.+|+|.|.|.+.|..| .....+.|.|..
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~ 142 (279)
T 2wbj_D 105 TSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTE 142 (279)
T ss_dssp SSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEES
T ss_pred ccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEec
Confidence 99999999999999999421 112235666665
No 480
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.49 E-value=5e-07 Score=79.11 Aligned_cols=101 Identities=14% Similarity=0.203 Sum_probs=64.7
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeC-CC-CCeEEEEeCC--eEee---ecccccccCCcceEEEEeecceeeEEEccc
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATG-SP-VPKIKWIFKE--KIIA---NISSGLANMNKRQYIIKTINSLSNLTIVAV 217 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g-~p-~p~i~W~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 217 (369)
.+.+...+. +.+.+|++++|.|.+.+ .+ .+.+.|++.. .... ............++..........|.|.++
T Consensus 140 ~~~v~~~p~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 218 (280)
T 3fku_X 140 QPGLTQPPS-VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGL 218 (280)
T ss_dssp CCSBBCCSE-EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSC
T ss_pred eeEEEeCCc-EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCC
Confidence 344444455 88999999999999988 44 3789999842 2111 111111111124555555556678999999
Q ss_pred CCCCCEEEEEEEEeCCc--e-EEEEEEEEEee
Q psy12695 218 TMSDSGIYTCRAKNGAG--E-VFTNISLNVIK 246 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~g--~-~~~~~~l~v~~ 246 (369)
+.+|+|.|+|.+.|..+ . ......|.|..
T Consensus 219 ~~~DsG~Y~C~~~~~~~~~~~~g~~t~l~V~~ 250 (280)
T 3fku_X 219 QPEDEADYYCSTWDSSLSAVVFGGGTKLTVLG 250 (280)
T ss_dssp CGGGCSEEEEEEEETTTTEEEEBCCCEEEEC-
T ss_pred CHHHCEEEEEEEecCCCCceEECCCEEEEECC
Confidence 99999999999999762 2 22334566644
No 481
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.49 E-value=4.2e-07 Score=75.77 Aligned_cols=98 Identities=18% Similarity=0.301 Sum_probs=64.9
Q ss_pred CCCCeeeccCCeEEEEEEeeCC-------CCCeEEEEeCCeEe-----ee-cccc--cccCCcceEEEEe--ecceeeEE
Q psy12695 151 ITPDVTAEENENVTLSCRATGS-------PVPKIKWIFKEKII-----AN-ISSG--LANMNKRQYIIKT--INSLSNLT 213 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~-------p~p~i~W~~~~~~~-----~~-~~~~--~~~~~~~~~~~~~--~~~~~~L~ 213 (369)
.|..+.+.+|+.++|.|.+.+. +.+.+.|++++... .. .... .......++.+.. ......|.
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~ 85 (214)
T 2zg1_A 6 VQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLS 85 (214)
T ss_dssp CCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEE
T ss_pred CCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEE
Confidence 4567889999999999999764 56789999986421 10 0000 0001122343322 12356899
Q ss_pred EcccCCCCCEEEEEEEEeCCceEE----EEEEEEEeecC
Q psy12695 214 IVAVTMSDSGIYTCRAKNGAGEVF----TNISLNVIKVE 248 (369)
Q Consensus 214 I~~v~~~D~G~Y~C~a~n~~g~~~----~~~~l~v~~~~ 248 (369)
|.+++.+|+|.|.|.+.+..+... ..+.|.|...+
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~ 124 (214)
T 2zg1_A 86 IGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALI 124 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCC
T ss_pred EccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCC
Confidence 999999999999999999874432 35777777643
No 482
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.49 E-value=7.4e-07 Score=76.76 Aligned_cols=96 Identities=18% Similarity=0.194 Sum_probs=60.8
Q ss_pred CCCeeeccCCeEEEEEEeeCC--CCCeEEEEeCC--eE--ee-ec-ccc---cccCCcceEEEEee--cceeeEEEcccC
Q psy12695 152 TPDVTAEENENVTLSCRATGS--PVPKIKWIFKE--KI--IA-NI-SSG---LANMNKRQYIIKTI--NSLSNLTIVAVT 218 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~--p~p~i~W~~~~--~~--~~-~~-~~~---~~~~~~~~~~~~~~--~~~~~L~I~~v~ 218 (369)
+..+.+.+|++++|.|.+.+. +.+.+.|++.. .. .. .. ... .......++.+... .....|.|.+++
T Consensus 15 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 94 (257)
T 3gkz_A 15 SGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVS 94 (257)
T ss_dssp ECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCC
Confidence 456779999999999999884 47789999842 11 11 00 000 00011234444322 345689999999
Q ss_pred CCCCEEEEEEEEeC----CceEEEEEEEEEeec
Q psy12695 219 MSDSGIYTCRAKNG----AGEVFTNISLNVIKV 247 (369)
Q Consensus 219 ~~D~G~Y~C~a~n~----~g~~~~~~~l~v~~~ 247 (369)
.+|+|.|.|.+.|. .+.....+.|.|...
T Consensus 95 ~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~ 127 (257)
T 3gkz_A 95 SEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGG 127 (257)
T ss_dssp GGGCEEEEEEEECTTCTTCEEECCCEEEEEC--
T ss_pred hhhCEEEEEEEecCCCcceeEEcCCEEEeecCc
Confidence 99999999999997 222334456777654
No 483
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.49 E-value=5.8e-07 Score=77.42 Aligned_cols=95 Identities=19% Similarity=0.295 Sum_probs=62.5
Q ss_pred CCCeeeccCCeEEEEEEeeCCC--CCeEEEEeCC--eE---eeecc-----cccccCCcceEEEEee--cceeeEEEccc
Q psy12695 152 TPDVTAEENENVTLSCRATGSP--VPKIKWIFKE--KI---IANIS-----SGLANMNKRQYIIKTI--NSLSNLTIVAV 217 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~---~~~~~-----~~~~~~~~~~~~~~~~--~~~~~L~I~~v 217 (369)
+..+.+.+|++++|.|.+.+.+ .+.+.|++.. .. +.... .........++.+... .....|.|.++
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (256)
T 3umt_A 9 SGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSL 88 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCC
Confidence 4557799999999999999876 6789999742 11 11000 0000011234444332 34567999999
Q ss_pred CCCCCEEEEEEEEeC----CceEEEEEEEEEee
Q psy12695 218 TMSDSGIYTCRAKNG----AGEVFTNISLNVIK 246 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~----~g~~~~~~~l~v~~ 246 (369)
+.+|+|.|.|.+.|. .+.....+.|.|..
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~ 121 (256)
T 3umt_A 89 TSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSS 121 (256)
T ss_dssp CGGGCEEEEEEECCSTTCCSCEECCCEEEEECC
T ss_pred CcccCEEEEEEEccCCCccccEECCCEEEEEcC
Confidence 999999999999987 34444556777764
No 484
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.49 E-value=9.6e-08 Score=79.73 Aligned_cols=79 Identities=18% Similarity=0.261 Sum_probs=54.6
Q ss_pred CCeeeccCCeEEEEEEeeC-CCCC-eEEEEeCCeEeeec-cc--ccccCCcceEEEEeecceeeEEEcccCCCCCEEEEE
Q psy12695 153 PDVTAEENENVTLSCRATG-SPVP-KIKWIFKEKIIANI-SS--GLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTC 227 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g-~p~p-~i~W~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 227 (369)
....+..|+.+.|.|.+.| .|.+ .+.|++++..+... .. .........+. ..+.|.|.++..+|+|.|+|
T Consensus 120 ~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~-----~~s~L~i~~~~~~d~G~Y~C 194 (213)
T 3d9a_L 120 PSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYS-----MSSTLTLTKDEYERHNSYTC 194 (213)
T ss_dssp CCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEE-----EEEEEEEEHHHHHHCCEEEE
T ss_pred CChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEE-----EEEEEEEeccccCCCCEEEE
Confidence 3334457999999999987 6665 79999999876532 00 00001111221 14589999999999999999
Q ss_pred EEEeCCceE
Q psy12695 228 RAKNGAGEV 236 (369)
Q Consensus 228 ~a~n~~g~~ 236 (369)
.|.|.....
T Consensus 195 ~a~n~~~~~ 203 (213)
T 3d9a_L 195 EATHKTSTS 203 (213)
T ss_dssp EEECTTCSS
T ss_pred EEEEccCCC
Confidence 999987653
No 485
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.48 E-value=2e-07 Score=82.85 Aligned_cols=92 Identities=23% Similarity=0.324 Sum_probs=76.9
Q ss_pred CceEEEecCCCCCccCCCC--CCCccEEEeecceeCh-hhccCCcccCeeeccCCcccccCCcccccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQL--DVGTQVLDLSDNFLDR-YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~--~~~~~~L~l~~n~i~~-~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~ 122 (369)
..+.+++.+++++.+|. + ...++.|+|++|+|.. ..|.++++|+.|+|++|+|+.++ .|..+++|+.|+|++|.
T Consensus 42 ~L~~L~l~~~~i~~l~~-~~~l~~L~~L~L~~n~i~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~l~~n~ 118 (308)
T 1h6u_A 42 GITTLSAFGTGVTTIEG-VQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVS--AIAGLQSIKTLDLTSTQ 118 (308)
T ss_dssp TCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCCG--GGTTCTTCCEEECTTSC
T ss_pred CcCEEEeeCCCccCchh-hhccCCCCEEEccCCcCCCChhHccCCCCCEEEccCCcCCCch--hhcCCCCCCEEECCCCC
Confidence 46789999999999884 4 4689999999999763 22999999999999999999985 58999999999999999
Q ss_pred eecccCCcccccCcCccccc
Q psy12695 123 IQKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 123 l~~~~~~~f~~l~~l~~~~~ 142 (369)
|+.++. |..+++|...++
T Consensus 119 l~~~~~--l~~l~~L~~L~l 136 (308)
T 1h6u_A 119 ITDVTP--LAGLSNLQVLYL 136 (308)
T ss_dssp CCCCGG--GTTCTTCCEEEC
T ss_pred CCCchh--hcCCCCCCEEEC
Confidence 999874 777776554433
No 486
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.48 E-value=5.9e-07 Score=77.44 Aligned_cols=101 Identities=22% Similarity=0.322 Sum_probs=63.9
Q ss_pred CCCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--eE---eeecc-ccc--ccCCcceEEEEe-ecceeeEEEc
Q psy12695 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--KI---IANIS-SGL--ANMNKRQYIIKT-INSLSNLTIV 215 (369)
Q Consensus 145 ~p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~---~~~~~-~~~--~~~~~~~~~~~~-~~~~~~L~I~ 215 (369)
.|.+...+..+.+.+|+.++|.|.+.+. .+.+.|+++. .. +.... ... ......++.... ......|.|.
T Consensus 137 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 215 (256)
T 3tf7_C 137 EAAVTQSPRNKVTVTGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLE 215 (256)
T ss_dssp -CCEEESCSEEEEETTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEES
T ss_pred ccEEEecCCEEEEeCCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEEC
Confidence 3455566777888999999999999887 7799999842 11 11000 000 000112333322 2345689999
Q ss_pred ccCCCCCEEEEEEEEeCCceEEE--EEEEEEee
Q psy12695 216 AVTMSDSGIYTCRAKNGAGEVFT--NISLNVIK 246 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~~g~~~~--~~~l~v~~ 246 (369)
+++.+|+|.|+|.|.|..|.... ...|.|..
T Consensus 216 ~v~~~DsG~Y~C~a~n~~g~~~fG~gt~l~v~~ 248 (256)
T 3tf7_C 216 SASPSQTSLYFCASSDAPGQLYFGEGSKLTVLE 248 (256)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCCHHHCEEEEEEecCCCCccEECCCeEEEEEc
Confidence 99999999999999998775322 23455543
No 487
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.48 E-value=2.7e-07 Score=85.96 Aligned_cols=97 Identities=19% Similarity=0.203 Sum_probs=66.0
Q ss_pred cCCCCCeeeccCCeEEEEEEeeCCCCC----eEEEEeCC--eEe---eecccccccCCcceEEEEeecceeeEEEcccCC
Q psy12695 149 RPITPDVTAEENENVTLSCRATGSPVP----KIKWIFKE--KII---ANISSGLANMNKRQYIIKTINSLSNLTIVAVTM 219 (369)
Q Consensus 149 ~~~~~~~~~~~G~~~~l~C~~~g~p~p----~i~W~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 219 (369)
...|..+.+.+|+.++|.|.+.+.|.+ .+.|++++ ..+ .............++..........|.|.+++.
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (438)
T 1qgc_4 5 TQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEA 84 (438)
T ss_dssp EEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCG
T ss_pred EecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcC
Confidence 344678889999999999999988874 89999963 211 111000001112345544455567899999999
Q ss_pred CCCEEEEEEEEeCCceE-EEEEEEEEe
Q psy12695 220 SDSGIYTCRAKNGAGEV-FTNISLNVI 245 (369)
Q Consensus 220 ~D~G~Y~C~a~n~~g~~-~~~~~l~v~ 245 (369)
+|+|.|+|.|.|..|.. ...+.+.|.
T Consensus 85 ~D~G~Y~C~a~n~~~~~~~~~~~l~V~ 111 (438)
T 1qgc_4 85 DDVATYYCQQSNEVPLTFGAGTKLDLK 111 (438)
T ss_dssp GGCEEEEEEECSSTTCCBCCCEEEEEC
T ss_pred cCCeeEEEEEecCCCccccCceeEEec
Confidence 99999999999987643 334556664
No 488
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.48 E-value=6.8e-07 Score=77.50 Aligned_cols=100 Identities=17% Similarity=0.260 Sum_probs=64.5
Q ss_pred CCccCCCCCeeeccCCeEEEEEEeeCCCCCeEEEEeC--CeE---eeecccccc----cCCcceEEEEe-ecceeeEEEc
Q psy12695 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFK--EKI---IANISSGLA----NMNKRQYIIKT-INSLSNLTIV 215 (369)
Q Consensus 146 p~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~--~~~---~~~~~~~~~----~~~~~~~~~~~-~~~~~~L~I~ 215 (369)
+.+...+..+.+.+|++++|.|.+. .+.+.+.|++. +.. +........ .....++.+.. ......|.|.
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~ 105 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQ 105 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEEC
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEEC
Confidence 4455566778999999999999986 57789999983 211 111000000 00113444332 2335789999
Q ss_pred ccCCCCCEEEEEEEEeC--CceEEEEEEEEEee
Q psy12695 216 AVTMSDSGIYTCRAKNG--AGEVFTNISLNVIK 246 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~--~g~~~~~~~l~v~~ 246 (369)
+++.+|+|.|.|.+.|. .+.......+.|..
T Consensus 106 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~ 138 (268)
T 3pl6_D 106 RTERGDSAVYLCATSALGDTQYFGPGTRLTVLE 138 (268)
T ss_dssp SCCGGGCEEEEEEEESSSSSCEECCCEEEEEES
T ss_pred CCCcccCEEEEEEEecCCCceeeCCcEEEEEec
Confidence 99999999999999973 33444455677765
No 489
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.48 E-value=4.2e-07 Score=80.65 Aligned_cols=79 Identities=19% Similarity=0.284 Sum_probs=60.7
Q ss_pred eeeccCCeEEEEEEe------eCCCCCeEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEE
Q psy12695 155 VTAEENENVTLSCRA------TGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCR 228 (369)
Q Consensus 155 ~~~~~G~~~~l~C~~------~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 228 (369)
..+.+|+.+.|.|.+ .|.|.|.+.|++++..+.... .++. ...+.|.|.+++.+|+|.|+|.
T Consensus 113 ~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~--------~~~~----~~~~~L~i~~v~~~d~G~Y~C~ 180 (315)
T 1itb_B 113 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN--------IHFS----GVKDRLIVMNVAEKHRGNYTCH 180 (315)
T ss_dssp EEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCS--------SSEE----EETTEEEESSCCGGGCEEEEEE
T ss_pred eEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCcc--------ceEe----ecCceEEEEeceehhCcEEEEE
Confidence 567899999999998 899999999999998764311 1111 1245899999999999999999
Q ss_pred EE-eCCceE---EEEEEEEEe
Q psy12695 229 AK-NGAGEV---FTNISLNVI 245 (369)
Q Consensus 229 a~-n~~g~~---~~~~~l~v~ 245 (369)
|. |..|.. ...+.+.+.
T Consensus 181 a~~n~~g~~~~~~~~~~~~~~ 201 (315)
T 1itb_B 181 ASYTYLGKQYPITRVIEFITL 201 (315)
T ss_dssp EEEEETTEEEEEEEEEEEEEE
T ss_pred EEcCCCCcEEEEEEEEEEEEe
Confidence 99 788876 344445444
No 490
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.48 E-value=6e-07 Score=77.24 Aligned_cols=95 Identities=16% Similarity=0.206 Sum_probs=60.9
Q ss_pred CCCCeeeccCCeEEEEEEeeCCCCCeEEEEeCC--e---Eeeecccccc---cCCcc-eEEEEeecceeeEEEcccCCCC
Q psy12695 151 ITPDVTAEENENVTLSCRATGSPVPKIKWIFKE--K---IIANISSGLA---NMNKR-QYIIKTINSLSNLTIVAVTMSD 221 (369)
Q Consensus 151 ~~~~~~~~~G~~~~l~C~~~g~p~p~i~W~~~~--~---~~~~~~~~~~---~~~~~-~~~~~~~~~~~~L~I~~v~~~D 221 (369)
.+..+.+.+|++++|.|.+.+.+.+.+.|++.. . .+........ ..... ++.+....... |.|.+++.+|
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~D 85 (253)
T 3to4_D 7 NPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMSQ 85 (253)
T ss_dssp ECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCSS
T ss_pred CCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChhh
Confidence 456788999999999999999999999999832 1 1111111000 00011 44443333333 9999999999
Q ss_pred CEEEEEEEEeCCc------eEEEEEEEEEee
Q psy12695 222 SGIYTCRAKNGAG------EVFTNISLNVIK 246 (369)
Q Consensus 222 ~G~Y~C~a~n~~g------~~~~~~~l~v~~ 246 (369)
+|.|.|.+.+..+ .......+.|..
T Consensus 86 sG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~ 116 (253)
T 3to4_D 86 GRTLYCTSSADHWTNTGQLYFGEGSKLTVLE 116 (253)
T ss_dssp CEEEEEEEECSCCSTTCCEEECCCEEEEEES
T ss_pred CeEEEEEEecCCCCcccceEECCCEEEEEec
Confidence 9999999987643 222334666654
No 491
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.48 E-value=3e-07 Score=87.91 Aligned_cols=88 Identities=11% Similarity=0.209 Sum_probs=61.5
Q ss_pred CeeeccCCeEEEEEEeeCC-CCC-eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEe
Q psy12695 154 DVTAEENENVTLSCRATGS-PVP-KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN 231 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~g~-p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 231 (369)
...+.+|+.+.|.|.+.|. |.| .|.|++++..+..............+. ..+.|.|.++..+| |.|+|.|.|
T Consensus 228 ~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~-----~~s~L~i~~~~~~d-G~Y~C~a~n 301 (523)
T 2rcj_C 228 SSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYS-----LSSVVTVPSSSLGT-QTYICNVNH 301 (523)
T ss_pred CcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEE-----EEEEEEechhhcCC-ceEEEEEEe
Confidence 3456789999999999887 878 899999987542211000000111111 14589999999999 999999999
Q ss_pred CCceEEEEEEEEEeec
Q psy12695 232 GAGEVFTNISLNVIKV 247 (369)
Q Consensus 232 ~~g~~~~~~~l~v~~~ 247 (369)
..|.....+.+.|...
T Consensus 302 ~~g~~~~~~~l~v~~~ 317 (523)
T 2rcj_C 302 KPSNTKVDKRVEPLSL 317 (523)
T ss_pred CCCCcceEEecCCCcC
Confidence 9998776666665433
No 492
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.48 E-value=1.2e-07 Score=78.31 Aligned_cols=93 Identities=28% Similarity=0.412 Sum_probs=62.7
Q ss_pred CeeeccCCeEEEEEEee----CCCCCeEEEEeCCeEeeecccccccCC---cceEEEEeecceeeEEEcccCCCCCEEEE
Q psy12695 154 DVTAEENENVTLSCRAT----GSPVPKIKWIFKEKIIANISSGLANMN---KRQYIIKTINSLSNLTIVAVTMSDSGIYT 226 (369)
Q Consensus 154 ~~~~~~G~~~~l~C~~~----g~p~p~i~W~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 226 (369)
.+.+.+|+.+.|.|.+. +.|.+.+.|++++..+........... ..+..+. ..+...|.|.+++.+|+|.|.
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~-~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD-ITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEE-STTTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEc-cCCCcEEEEecccchhCeEEE
Confidence 46789999999999995 346678999999876532211110000 0111111 123568999999999999999
Q ss_pred EEEEeCCceE-----EEEEEEEEeec
Q psy12695 227 CRAKNGAGEV-----FTNISLNVIKV 247 (369)
Q Consensus 227 C~a~n~~g~~-----~~~~~l~v~~~ 247 (369)
|.+.|..|.. ...+.|.|...
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~ 107 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKAD 107 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECC
T ss_pred EEEEcCCCCccccccccEEEEEEcCC
Confidence 9999977543 35667777664
No 493
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.47 E-value=4.2e-07 Score=81.99 Aligned_cols=95 Identities=15% Similarity=0.237 Sum_probs=64.1
Q ss_pred CCCeeeccCCeEEEEEEeeCCC--CCeEEEEeC--CeEee---eccc-c----cccCCcceEEEEee--cceeeEEEccc
Q psy12695 152 TPDVTAEENENVTLSCRATGSP--VPKIKWIFK--EKIIA---NISS-G----LANMNKRQYIIKTI--NSLSNLTIVAV 217 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~~~~---~~~~-~----~~~~~~~~~~~~~~--~~~~~L~I~~v 217 (369)
+..+.+.+|+.++|.|.+.+.+ .+.+.|+++ +..+. .... . .......++.+... .....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (344)
T 1za6_B 7 SGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSL 86 (344)
T ss_dssp CCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCC
Confidence 4568899999999999999874 678999986 32221 0000 0 00011234444322 34578999999
Q ss_pred CCCCCEEEEEEEEeCCceEEEEEEEEEee
Q psy12695 218 TMSDSGIYTCRAKNGAGEVFTNISLNVIK 246 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~g~~~~~~~l~v~~ 246 (369)
+.+|+|.|.|.+.|..+.....+.|.|..
T Consensus 87 ~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~ 115 (344)
T 1za6_B 87 RSEDTAVYFCTRSLNMAYWGQGTLVTVSS 115 (344)
T ss_dssp CGGGCEEEEEEETTTTCEECCCEEEEECS
T ss_pred CcccCEEEEEEEecCcceecCcEEEEEec
Confidence 99999999999999765555556777763
No 494
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.47 E-value=2.8e-07 Score=76.88 Aligned_cols=82 Identities=16% Similarity=0.263 Sum_probs=54.8
Q ss_pred CCeeeccCCeEEEEEEeeCCCCC--eEEEEeCCeEeeeccccc--ccCCcceEEEEeecceeeEEEcccCCCCCEEEEEE
Q psy12695 153 PDVTAEENENVTLSCRATGSPVP--KIKWIFKEKIIANISSGL--ANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCR 228 (369)
Q Consensus 153 ~~~~~~~G~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 228 (369)
....+..|+.++|.|.+.|.+++ .|.|++++..+....... .......+. ..+.|.|..+..+|+|.|+|.
T Consensus 123 ~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~-----~~s~L~i~~~~~~d~g~Y~C~ 197 (212)
T 1q0x_L 123 PSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYM-----ASSYLTLTARAWERHSSYSCQ 197 (212)
T ss_dssp CCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEE-----EEEEEEEEHHHHTTCCEEEEE
T ss_pred CCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEE-----EEEEEEEcHHHccCCCcEEEE
Confidence 33344579999999999885443 799999988764321100 000111111 135799999999999999999
Q ss_pred EEeCCceEEEE
Q psy12695 229 AKNGAGEVFTN 239 (369)
Q Consensus 229 a~n~~g~~~~~ 239 (369)
|.|.......+
T Consensus 198 a~n~~~~~~~~ 208 (212)
T 1q0x_L 198 VTHEGHSSNKT 208 (212)
T ss_dssp EEETTEEEEEE
T ss_pred EEeCCcceeee
Confidence 99987664444
No 495
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.47 E-value=9e-07 Score=74.42 Aligned_cols=95 Identities=20% Similarity=0.246 Sum_probs=62.9
Q ss_pred CCCeeeccCCeEEEEEEeeCCC--CCeEEEEeCC--eE---eeecccc-----cccCCcceEEEEee--cceeeEEEccc
Q psy12695 152 TPDVTAEENENVTLSCRATGSP--VPKIKWIFKE--KI---IANISSG-----LANMNKRQYIIKTI--NSLSNLTIVAV 217 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~---~~~~~~~-----~~~~~~~~~~~~~~--~~~~~L~I~~v 217 (369)
+..+.+.+|++++|.|.+.+.+ .+.+.|+++. .. +...... .......++.+... .+...|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 4568899999999999999876 5789999853 11 1111100 00011235544332 34568999999
Q ss_pred CCCCCEEEEEEEEeCCce---EEEEEEEEEee
Q psy12695 218 TMSDSGIYTCRAKNGAGE---VFTNISLNVIK 246 (369)
Q Consensus 218 ~~~D~G~Y~C~a~n~~g~---~~~~~~l~v~~ 246 (369)
+.+|+|.|.|.+.+..+. ....+.|.|..
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~ 118 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSA 118 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECS
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecC
Confidence 999999999999997653 22335677764
No 496
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.47 E-value=7.1e-07 Score=74.88 Aligned_cols=95 Identities=22% Similarity=0.341 Sum_probs=62.2
Q ss_pred CCCeeeccCCeEEEEEEeeCCC--CCeEEEEeCC--eE---eeeccc--cc----c-cCCcceEEEEee--cceeeEEEc
Q psy12695 152 TPDVTAEENENVTLSCRATGSP--VPKIKWIFKE--KI---IANISS--GL----A-NMNKRQYIIKTI--NSLSNLTIV 215 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~---~~~~~~--~~----~-~~~~~~~~~~~~--~~~~~L~I~ 215 (369)
+..+.+.+|++++|.|.+.+.+ .+.+.|++++ .. +..... .. . ..-..++.+... .+...|.|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 4667899999999999999876 6789999853 11 111110 00 0 000234444332 245589999
Q ss_pred ccCCCCCEEEEEEEEeCCceE-E--EEEEEEEee
Q psy12695 216 AVTMSDSGIYTCRAKNGAGEV-F--TNISLNVIK 246 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~~g~~-~--~~~~l~v~~ 246 (369)
+++.+|+|.|.|.+.|..+.. . ..+.|.|..
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 120 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSS 120 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECS
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEcc
Confidence 999999999999999976432 1 345666653
No 497
>2frg_P TREM-like transcript-1; immunoglobulin-like, beta-sandwich, cell surface receptor, triggering receptor, platelet receptor, ITIM, immune system; 1.19A {Homo sapiens}
Probab=98.47 E-value=1.7e-06 Score=63.70 Aligned_cols=94 Identities=16% Similarity=0.258 Sum_probs=58.4
Q ss_pred CCCeeeccCCeEEEEEEeeCC-CCCeEEEEeC--Ce--EeeecccccccCCcceEEEE-eecceeeEEEcccCCCCCEEE
Q psy12695 152 TPDVTAEENENVTLSCRATGS-PVPKIKWIFK--EK--IIANISSGLANMNKRQYIIK-TINSLSNLTIVAVTMSDSGIY 225 (369)
Q Consensus 152 ~~~~~~~~G~~~~l~C~~~g~-p~p~i~W~~~--~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y 225 (369)
|..+.+.+|++++|.|..... ....+.|+++ ++ .+.............++.+. ...+...|+|.+++.+|+|.|
T Consensus 4 p~~v~~~~G~svtl~C~~s~~~~~~~~~Wyrq~~g~~~~li~~~~~~~~~~~~R~s~~~~~~~~~~L~I~~l~~~Dsg~Y 83 (106)
T 2frg_P 4 PEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLPEGCQPLVSSAVDRRAPAGRRTFLTDLGGGLLQVEMVTLQEEDAGEY 83 (106)
T ss_dssp CEEEEECTTCCEEEEEECCGGGTTSEEEEEEEETTEEEEEEECCBTCEEEETTTEEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEEEecCCcEEEEeEecCCcccCcEEEEECCCCCCcEEEEeCCcEeeecCCCEEEEcCCCCEEEEEEccCCHHHCEEE
Confidence 456778999999999998632 2335789984 22 11111111111113345442 234457899999999999999
Q ss_pred EEEEEeCCceE-EEEEEEEEe
Q psy12695 226 TCRAKNGAGEV-FTNISLNVI 245 (369)
Q Consensus 226 ~C~a~n~~g~~-~~~~~l~v~ 245 (369)
.|.+....+.. ...+.|.|.
T Consensus 84 ~C~~~~~~~~d~~~~v~L~V~ 104 (106)
T 2frg_P 84 GCMVDGARGPQILHRVSLNIL 104 (106)
T ss_dssp EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEeecCCCCCEeEEEEEEEe
Confidence 99998776443 344555553
No 498
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.47 E-value=7.9e-08 Score=80.94 Aligned_cols=80 Identities=21% Similarity=0.275 Sum_probs=54.9
Q ss_pred eeccCCeEEEEEEeeCC-CCC-eEEEEeCCeEeeecccccccCCcceEEEEeecceeeEEEcccCCCCCEEEEEEEEeCC
Q psy12695 156 TAEENENVTLSCRATGS-PVP-KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGA 233 (369)
Q Consensus 156 ~~~~G~~~~l~C~~~g~-p~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 233 (369)
.+.+|+.++|.|.+.|. |.| .+.|++++..+......... ....+. ..+.|.|.++..+| |.|+|.|.|..
T Consensus 138 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~-~~~~~~-----~~s~L~i~~~~~~d-g~y~C~a~n~~ 210 (222)
T 1q9r_B 138 AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVL-QSDLYT-----LSSSVTVPSSTWPS-ETVTCNVAHPA 210 (222)
T ss_dssp CCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEEEEEEE-ETTEEE-----EEEEEEEETTTTTT-SCCEEEEEEGG
T ss_pred cccCCCcEEEEEEEccEECCCCEEEEecCCeEcceEeccccc-cCCcEE-----EEEEEEECchhcCC-CeEEEEEEccC
Confidence 45689999999999985 888 99999987653211000000 001121 13579999999899 99999999999
Q ss_pred ceEEEEEEE
Q psy12695 234 GEVFTNISL 242 (369)
Q Consensus 234 g~~~~~~~l 242 (369)
|.......+
T Consensus 211 ~~~~~~~~i 219 (222)
T 1q9r_B 211 SSTKVDKKI 219 (222)
T ss_dssp GTEEEEEEC
T ss_pred CCCcEEEec
Confidence 876544433
No 499
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.46 E-value=4.7e-07 Score=77.87 Aligned_cols=97 Identities=16% Similarity=0.228 Sum_probs=63.3
Q ss_pred CCCCCeeeccCCeEEEEEEeeCCC--CCeEEEEeC--CeEeeec---c-----cccccCCcceEEEEee--cceeeEEEc
Q psy12695 150 PITPDVTAEENENVTLSCRATGSP--VPKIKWIFK--EKIIANI---S-----SGLANMNKRQYIIKTI--NSLSNLTIV 215 (369)
Q Consensus 150 ~~~~~~~~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~~~~~~---~-----~~~~~~~~~~~~~~~~--~~~~~L~I~ 215 (369)
..+..+.+.+|++++|.|.+.|.+ .+.+.|++. +...... . .........++.+... .....|.|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 85 (253)
T 3uzq_A 6 EQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLS 85 (253)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeC
Confidence 346778899999999999998854 678999983 2111100 0 0000011224444322 235569999
Q ss_pred ccCCCCCEEEEEEEEeCCceEE-EEEEEEEee
Q psy12695 216 AVTMSDSGIYTCRAKNGAGEVF-TNISLNVIK 246 (369)
Q Consensus 216 ~v~~~D~G~Y~C~a~n~~g~~~-~~~~l~v~~ 246 (369)
+++.+|+|.|.|.+.|..+... ..+.|.|..
T Consensus 86 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~ 117 (253)
T 3uzq_A 86 SLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSA 117 (253)
T ss_dssp SCCGGGCEEEEEEECSSSCCEECCCEEEEECS
T ss_pred CCCcccCEEEEEEEeeCCccEECCCcEEEEec
Confidence 9999999999999999766543 446677764
No 500
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.46 E-value=2.1e-07 Score=82.08 Aligned_cols=92 Identities=23% Similarity=0.239 Sum_probs=74.6
Q ss_pred CceEEEecCCCCCccCCCC--CCCccEEEeecceeC-hhhccCCcccCeeeccCCcccccCCcccccccccccccccccc
Q psy12695 46 GKETVLCKAKNFTTIPEQL--DVGTQVLDLSDNFLD-RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122 (369)
Q Consensus 46 ~~~~~~c~~~~l~~ip~~~--~~~~~~L~l~~n~i~-~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~ 122 (369)
..+.++++++.++.++. + ...++.|+|++|+|. ...|.++++|+.|+|++|+|+.++ .|..+++|+.|+|++|.
T Consensus 69 ~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~i~~~~--~l~~l~~L~~L~l~~n~ 145 (291)
T 1h6t_A 69 NVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDIN--GLVHLPQLESLYLGNNK 145 (291)
T ss_dssp TCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCGGGGTTCTTCCEEECTTSCCCCCG--GGGGCTTCCEEECCSSC
T ss_pred CCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCCChhhccCCCCCEEECCCCcCCCCh--hhcCCCCCCEEEccCCc
Confidence 35789999999998876 4 357899999999976 345889999999999999999884 57889999999999999
Q ss_pred eecccCCcccccCcCccccc
Q psy12695 123 IQKITHEAFINVPKLNLEDF 142 (369)
Q Consensus 123 l~~~~~~~f~~l~~l~~~~~ 142 (369)
|+.+ ..|..+++|...++
T Consensus 146 l~~~--~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 146 ITDI--TVLSRLTKLDTLSL 163 (291)
T ss_dssp CCCC--GGGGGCTTCSEEEC
T ss_pred CCcc--hhhccCCCCCEEEc
Confidence 9988 36777777655444
Done!