Your job contains 1 sequence.
>psy12695
MDHDECADDVMMIYEWRVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTI
PEQLDVGTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSG
NPIQKITHEAFINVPKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWI
FKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNI
SLNVIKVETAVAQPDPVYLVASLTTVVTIILTACFVVLCIILLKAKRKRYADVNRRYLED
KCESNHQQSKPLTVNKMDRPPPVPSAVPAVPLVPPHPPPRNEYSSVPLSDTTRGPEPRDK
IDHEENIDK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12695
(369 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0028370 - symbol:kek3 "kekkon-3" species:7227 "Dro... 248 1.4e-38 2
FB|FBgn0015399 - symbol:kek1 "kekkon-1" species:7227 "Dro... 208 2.0e-26 2
FB|FBgn0015400 - symbol:kek2 "kekkon-2" species:7227 "Dro... 190 7.4e-25 2
MGI|MGI:2144814 - symbol:Lrfn5 "leucine rich repeat and f... 157 1.7e-19 2
RGD|1309357 - symbol:Lrfn5 "leucine rich repeat and fibro... 157 2.8e-19 2
FB|FBgn0032484 - symbol:kek4 "kekkon4" species:7227 "Dros... 153 5.7e-17 2
FB|FBgn0031016 - symbol:kek5 "kekkon5" species:7227 "Dros... 145 6.1e-15 3
ZFIN|ZDB-GENE-080219-38 - symbol:zgc:172282 "zgc:172282" ... 140 1.8e-14 2
WB|WBGene00004257 - symbol:pxn-2 species:6239 "Caenorhabd... 138 1.2e-13 2
MGI|MGI:2442298 - symbol:Lingo2 "leucine rich repeat and ... 140 3.5e-13 2
UNIPROTKB|Q7L985 - symbol:LINGO2 "Leucine-rich repeat and... 139 9.3e-13 2
MGI|MGI:2385612 - symbol:Lrfn4 "leucine rich repeat and f... 124 1.5e-12 2
RGD|1585286 - symbol:Lrfn4 "leucine rich repeat and fibro... 124 1.5e-12 2
MGI|MGI:2444651 - symbol:Lingo4 "leucine rich repeat and ... 143 2.1e-12 2
UNIPROTKB|F1NTY3 - symbol:LRRC4C "Uncharacterized protein... 131 3.4e-12 2
ZFIN|ZDB-GENE-040426-1227 - symbol:mb21d2b "Mab-21 domain... 126 4.3e-12 2
UNIPROTKB|Q1RMS4 - symbol:LRFN3 "Leucine-rich repeat and ... 119 8.3e-12 2
UNIPROTKB|Q9BTN0 - symbol:LRFN3 "Leucine-rich repeat and ... 118 1.4e-11 2
MGI|MGI:2442512 - symbol:Lrfn3 "leucine rich repeat and f... 119 2.7e-11 2
ZFIN|ZDB-GENE-040924-5 - symbol:lrit1a "leucine-rich repe... 114 3.5e-11 3
UNIPROTKB|F1P2C4 - symbol:LRRC4C "Uncharacterized protein... 127 3.8e-11 2
RGD|1305567 - symbol:Lrfn3 "leucine rich repeat and fibro... 117 4.5e-11 2
MGI|MGI:1917780 - symbol:Lrfn2 "leucine rich repeat and f... 122 4.6e-11 2
RGD|1311831 - symbol:Lrfn2 "leucine rich repeat and fibro... 122 4.6e-11 2
UNIPROTKB|Q9ULH4 - symbol:LRFN2 "Leucine-rich repeat and ... 120 6.1e-11 2
UNIPROTKB|Q96NI6 - symbol:LRFN5 "Leucine-rich repeat and ... 156 6.9e-11 2
UNIPROTKB|E2REC5 - symbol:LRRC4C "Uncharacterized protein... 133 7.0e-11 2
UNIPROTKB|Q9HCJ2 - symbol:LRRC4C "Leucine-rich repeat-con... 133 7.1e-11 2
UNIPROTKB|F1MXH5 - symbol:LRRC4C "Uncharacterized protein... 133 7.1e-11 2
MGI|MGI:2442636 - symbol:Lrrc4c "leucine rich repeat cont... 133 7.1e-11 2
RGD|1311013 - symbol:Lrrc4c "leucine rich repeat containi... 133 7.1e-11 2
UNIPROTKB|F1SHH6 - symbol:LRRC4C "Uncharacterized protein... 133 7.1e-11 2
UNIPROTKB|Q9P244 - symbol:LRFN1 "Leucine-rich repeat and ... 126 8.3e-11 2
RGD|1304707 - symbol:Lrfn1 "leucine rich repeat and fibro... 126 1.2e-10 3
UNIPROTKB|Q6UY18 - symbol:LINGO4 "Leucine-rich repeat and... 131 1.2e-10 2
MGI|MGI:2136810 - symbol:Lrfn1 "leucine rich repeat and f... 126 1.5e-10 3
ZFIN|ZDB-GENE-071126-1 - symbol:lrrn1 "leucine rich repea... 133 2.0e-10 2
ZFIN|ZDB-GENE-050522-160 - symbol:lrit2 "leucine-rich rep... 117 2.3e-10 2
MGI|MGI:2443955 - symbol:Lrig3 "leucine-rich repeats and ... 116 2.4e-10 2
ZFIN|ZDB-GENE-080723-57 - symbol:lingo2 "leucine rich rep... 130 2.7e-10 2
FB|FBgn0039862 - symbol:kek6 "kek6" species:7227 "Drosoph... 173 7.1e-10 1
ZFIN|ZDB-GENE-050522-533 - symbol:lrrc4c "leucine rich re... 119 8.2e-10 2
ZFIN|ZDB-GENE-080723-63 - symbol:zgc:195063 "zgc:195063" ... 114 8.7e-10 2
MGI|MGI:1915522 - symbol:Lingo1 "leucine rich repeat and ... 133 1.4e-09 2
UNIPROTKB|G3V881 - symbol:Lingo1 "Leucine rich repeat neu... 133 1.4e-09 2
UNIPROTKB|F1MBT2 - symbol:LINGO1 "Uncharacterized protein... 133 1.8e-09 2
UNIPROTKB|F1PGX0 - symbol:LINGO1 "Uncharacterized protein... 133 1.8e-09 2
UNIPROTKB|Q96FE5 - symbol:LINGO1 "Leucine-rich repeat and... 133 1.8e-09 2
UNIPROTKB|F1SJ87 - symbol:LINGO1 "Uncharacterized protein... 133 1.8e-09 2
ZFIN|ZDB-GENE-091116-44 - symbol:lrrc4bb "leucine rich re... 116 2.0e-09 2
UNIPROTKB|Q50L44 - symbol:LINGO1 "Leucine-rich repeat and... 127 3.2e-09 2
UNIPROTKB|Q92626 - symbol:PXDN "Peroxidasin homolog" spec... 120 3.5e-09 2
ZFIN|ZDB-GENE-080327-13 - symbol:lrrc3 "leucine rich repe... 157 3.7e-09 1
MGI|MGI:106036 - symbol:Lrrn3 "leucine rich repeat protei... 122 6.5e-09 2
UNIPROTKB|Q6UXM1 - symbol:LRIG3 "Leucine-rich repeats and... 117 6.5e-09 2
UNIPROTKB|Q9HBW1 - symbol:LRRC4 "Leucine-rich repeat-cont... 109 6.8e-09 2
UNIPROTKB|F1PZW2 - symbol:LRRC4B "Uncharacterized protein... 112 8.2e-09 2
ZFIN|ZDB-GENE-080327-25 - symbol:lrrc4ba "leucine rich re... 114 1.0e-08 2
ZFIN|ZDB-GENE-040912-136 - symbol:lingo1b "leucine rich r... 135 1.2e-08 2
MGI|MGI:3027390 - symbol:Lrrc4b "leucine rich repeat cont... 110 1.3e-08 2
RGD|1307121 - symbol:Lrrc4b "leucine rich repeat containi... 110 1.3e-08 2
ZFIN|ZDB-GENE-080327-5 - symbol:sc:d0316 "sc:d0316" speci... 119 1.3e-08 2
MGI|MGI:2182081 - symbol:Lrrc4 "leucine rich repeat conta... 109 1.4e-08 2
MGI|MGI:2444885 - symbol:Lrit2 "leucine-rich repeat, immu... 105 1.5e-08 2
UNIPROTKB|I3LDA4 - symbol:PXDN "Uncharacterized protein" ... 112 1.7e-08 2
ZFIN|ZDB-GENE-060503-496 - symbol:lrrc24 "leucine rich re... 115 1.7e-08 3
UNIPROTKB|E1BPK8 - symbol:LRRC4B "Uncharacterized protein... 109 1.7e-08 2
UNIPROTKB|I3LJI7 - symbol:LRRC4B "Uncharacterized protein... 109 1.8e-08 2
RGD|1560026 - symbol:Lrrc4 "leucine rich repeat containin... 108 1.8e-08 2
WB|WBGene00004256 - symbol:pxn-1 species:6239 "Caenorhabd... 117 1.8e-08 2
UNIPROTKB|E1C0J7 - symbol:PXDNL "Uncharacterized protein"... 108 2.0e-08 2
UNIPROTKB|E1C0J1 - symbol:PXDNL "Uncharacterized protein"... 108 2.1e-08 2
UNIPROTKB|Q9NT99 - symbol:LRRC4B "Leucine-rich repeat-con... 107 2.9e-08 2
UNIPROTKB|H3BQ49 - symbol:LINGO1 "Leucine-rich repeat and... 133 3.0e-08 1
MGI|MGI:107935 - symbol:Lrig1 "leucine-rich repeats and i... 115 3.4e-08 2
UNIPROTKB|F1PKU2 - symbol:PXDNL "Uncharacterized protein"... 120 3.5e-08 2
UNIPROTKB|A1KZ92 - symbol:PXDNL "Peroxidasin-like protein... 119 4.7e-08 2
MGI|MGI:2443718 - symbol:Lrig2 "leucine-rich repeats and ... 117 4.8e-08 2
UNIPROTKB|O75325 - symbol:LRRN2 "Leucine-rich repeat neur... 103 5.0e-08 2
UNIPROTKB|Q9H3W5 - symbol:LRRN3 "Leucine-rich repeat neur... 108 5.6e-08 2
UNIPROTKB|O94898 - symbol:LRIG2 "Leucine-rich repeats and... 116 6.3e-08 2
UNIPROTKB|Q6EMK4 - symbol:VASN "Vasorin" species:9606 "Ho... 154 6.9e-08 1
RGD|71066 - symbol:Lrrn3 "leucine rich repeat neuronal 3"... 111 8.6e-08 2
MGI|MGI:1916925 - symbol:Pxdn "peroxidasin homolog (Droso... 107 9.3e-08 2
RGD|1303079 - symbol:Amigo1 "adhesion molecule with Ig li... 118 9.5e-08 2
UNIPROTKB|Q96JA1 - symbol:LRIG1 "Leucine-rich repeats and... 117 1.1e-07 2
UNIPROTKB|Q6WRI0 - symbol:IGSF10 "Immunoglobulin superfam... 113 1.1e-07 2
ZFIN|ZDB-GENE-010126-4 - symbol:ntrk3b "neurotrophic tyro... 131 1.4e-07 2
ZFIN|ZDB-GENE-080327-15 - symbol:lrrtm4l1 "leucine rich r... 150 1.5e-07 1
ZFIN|ZDB-GENE-060503-114 - symbol:amigo1 "adhesion molecu... 125 1.6e-07 2
WB|WBGene00022129 - symbol:lron-11 species:6239 "Caenorha... 149 1.8e-07 1
RGD|628861 - symbol:Lrrc3 "leucine rich repeat containing... 142 2.0e-07 1
UNIPROTKB|Q86WK6 - symbol:AMIGO1 "Amphoterin-induced prot... 116 2.0e-07 2
MGI|MGI:2653612 - symbol:Amigo1 "adhesion molecule with I... 121 2.2e-07 2
UNIPROTKB|Q9BY71 - symbol:LRRC3 "Leucine-rich repeat-cont... 141 2.6e-07 1
ZFIN|ZDB-GENE-040822-27 - symbol:negr1 "neuronal growth r... 98 2.7e-07 2
UNIPROTKB|H3BMN3 - symbol:LINGO1 "Leucine-rich repeat and... 124 2.9e-07 1
ZFIN|ZDB-GENE-090312-22 - symbol:mxra5 "matrix-remodellin... 115 3.2e-07 2
MGI|MGI:2141485 - symbol:Lrtm2 "leucine-rich repeats and ... 144 3.2e-07 1
WB|WBGene00020649 - symbol:sma-10 species:6239 "Caenorhab... 118 3.3e-07 2
WARNING: Descriptions of 239 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0028370 [details] [associations]
symbol:kek3 "kekkon-3" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0005887 "integral
to plasma membrane" evidence=ISM] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG255871
GeneTree:ENSGT00700000104028 KO:K07523 HSSP:P13596 EMBL:BT044530
RefSeq:NP_001162986.1 RefSeq:NP_523575.1 UniGene:Dm.21548
SMR:Q9V430 IntAct:Q9V430 MINT:MINT-324955
EnsemblMetazoa:FBtr0080752 EnsemblMetazoa:FBtr0300848 GeneID:34912
KEGG:dme:Dmel_CG4192 UCSC:CG4192-RA CTD:34912 FlyBase:FBgn0028370
InParanoid:Q9V430 OMA:KMKETCD OrthoDB:EOG4P2NH5 GenomeRNAi:34912
NextBio:790842 Uniprot:Q9V430
Length = 1021
Score = 248 (92.4 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 54/167 (32%), Positives = 93/167 (55%)
Query: 136 KLNLEDFACSPNIRPITPDVTAE--ENENVTLSCRATGSPVPKIKWIFKEKIIANISSG- 192
KL+++DFAC P I + D TA E N+T+SC G P P +KW+ K ++IAN+S+G
Sbjct: 308 KLDVDDFACVPQI--VATDTTAHGVEGRNITMSCYVEGVPQPAVKWLLKNRLIANLSAGG 365
Query: 193 -----------LANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNIS 241
A ++ Y++ + + SNLTI+ M D+GIYTC A+N AG+V +++
Sbjct: 366 DGDSDSEPRTAAATQGRKTYVVNMLRNASNLTILTADMQDAGIYTCAAENKAGKVEASVT 425
Query: 242 LNVIKVETAVAQPDPVYLVASLTTVVTIILTACFVVLCIILLKAKRK 288
L V + + L+ ++ ++ ++ + F +C+ L+ +RK
Sbjct: 426 LAVSRRPPEAPWGVRIILLGAVAALL-LVGGSSFAAICLCSLQRRRK 471
Score = 226 (84.6 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 54/141 (38%), Positives = 79/141 (56%)
Query: 20 IMVLVCTGCL-QVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFL 78
+ +L C L Q+ AECP+ CECKWK GKE+VLC N T IP+ LD GTQ+LDLS N +
Sbjct: 63 LWLLCCCSQLGQLRAECPAVCECKWKSGKESVLCLNANLTHIPQPLDAGTQLLDLSGNEI 122
Query: 79 -----DRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFIN 133
D + +L+NL ++ L+ ++ + H ++ L EL LS N + I A +
Sbjct: 123 QLIPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSAIPSLALYH 182
Query: 134 VPKLNLEDFACSPNIRPITPD 154
V +L + +P +R PD
Sbjct: 183 VSELRELRLSGNPILR--VPD 201
Score = 169 (64.5 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVP-- 135
++R+ FRKLINLVELDLS N + +PS L + ELREL+LSGNPI ++ +AF +VP
Sbjct: 151 IERHAFRKLINLVELDLSQNLLSAIPSLALYHVSELRELRLSGNPILRVPDDAFGHVPQL 210
Query: 136 -KLNLED 141
KL L D
Sbjct: 211 VKLELSD 217
Score = 58 (25.5 bits), Expect = 5.4e-21, Sum P(2) = 5.4e-21
Identities = 23/64 (35%), Positives = 29/64 (45%)
Query: 71 LDLSDNFLDRYTFRKLIN---LVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
LDLS N L L + L EL LS N I VP + +L +L+LS + I
Sbjct: 165 LDLSQNLLSAIPSLALYHVSELRELRLSGNPILRVPDDAFGHVPQLVKLELSDCRLSHIA 224
Query: 128 HEAF 131
AF
Sbjct: 225 VRAF 228
>FB|FBgn0015399 [details] [associations]
symbol:kek1 "kekkon-1" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0048477
"oogenesis" evidence=IMP] [GO:0042059 "negative regulation of
epidermal growth factor receptor signaling pathway"
evidence=IGI;IMP;TAS] [GO:0005154 "epidermal growth factor receptor
binding" evidence=IPI] [GO:0007175 "negative regulation of
epidermal growth factor-activated receptor activity"
evidence=IDA;TAS] [GO:0016021 "integral to membrane" evidence=TAS]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0048019 "receptor
antagonist activity" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005576 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0022008 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0048477 GO:GO:0000910 GO:GO:0048019 InterPro:IPR013098
Pfam:PF07679 MEROPS:I43.001 GO:GO:0007175 HSSP:P07359 EMBL:U42767
ProteinModelPortal:P91643 SMR:P91643 STRING:P91643 PRIDE:P91643
FlyBase:FBgn0015399 InParanoid:P91643 OrthoDB:EOG48932C
ArrayExpress:P91643 Bgee:P91643 Uniprot:P91643
Length = 880
Score = 208 (78.3 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 56/194 (28%), Positives = 96/194 (49%)
Query: 119 SGNPIQKITHEAFINVPKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIK 178
SG P ++I +F + L++++FAC P + PI+ V A EN +++CRA P I
Sbjct: 306 SGGP-ERIIDRSFAD---LHVDEFACRPEMLPISHYVEAAMGENASITCRARAVPAANIN 361
Query: 179 WIFKEKIIANISSGLA--NMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEV 236
W + +++AN S+ A ++ + + S L + +DS + C A+N AG
Sbjct: 362 WYWNGRLLANNSAFTAYQRIHMLEQVEGGFEKRSKLVLTNAQETDSSEFYCVAENRAGMA 421
Query: 237 FTNISLNVIKVETAVAQPDPVYLVASLTTVVTIILTACFVVLCIILLKAKRKRYADVNR- 295
N +L+V +A +V +V +I+ A V++C+ LL+ KR+ Y D
Sbjct: 422 EANFTLHVSMRAAGMASLGSGQIVGLSAALVALIVFALGVIMCL-LLRVKRQPYVDSKTP 480
Query: 296 RYLEDKCESNHQQS 309
++E NHQ S
Sbjct: 481 NHMEVITSVNHQNS 494
Score = 163 (62.4 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 39/108 (36%), Positives = 57/108 (52%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFL-----DRYTFRKLINL 89
C + C CKWKGGK+TV C ++ IPE +D TQVLD+S N L +++ L+NL
Sbjct: 90 CQTVCACKWKGGKQTVECIDRHLIQIPEHIDPNTQVLDMSGNKLQTLSNEQFIRANLLNL 149
Query: 90 VELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
+L L +I + + L EL LS N + + A ++P L
Sbjct: 150 QKLYLRNCKIGEIERETFKGLTNLVELDLSHNLLVTVPSLALGHIPSL 197
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
++R TF+ L NLVELDLS+N + VPS L I LREL L+ N I KI +AF N P L
Sbjct: 162 IERETFKGLTNLVELDLSHNLLVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSL 221
Query: 138 NLEDFA 143
+ D +
Sbjct: 222 HKLDLS 227
Score = 63 (27.2 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 24/72 (33%), Positives = 33/72 (45%)
Query: 71 LDLSDNFL---DRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
LDLS N L + +L EL L+ N I + S + L +L LS IQ I+
Sbjct: 176 LDLSHNLLVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTIS 235
Query: 128 HEAFINVPKLNL 139
+AF + L L
Sbjct: 236 AQAFGGLQGLTL 247
>FB|FBgn0015400 [details] [associations]
symbol:kek2 "kekkon-2" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HSSP:Q9BZR6
GeneTree:ENSGT00700000104028 FlyBase:FBgn0015400 EMBL:BT120011
RefSeq:NP_523551.1 UniGene:Dm.2402 SMR:Q9VKG1 MINT:MINT-1619269
STRING:Q9VKG1 EnsemblMetazoa:FBtr0080252 GeneID:34582
KEGG:dme:Dmel_CG4977 UCSC:CG4977-RA CTD:34582 InParanoid:Q9VKG1
OMA:DSPDEGY GenomeRNAi:34582 NextBio:789152 Uniprot:Q9VKG1
Length = 894
Score = 190 (71.9 bits), Expect = 7.4e-25, Sum P(2) = 7.4e-25
Identities = 43/109 (39%), Positives = 60/109 (55%)
Query: 29 LQVFAECP-STCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFL-----DRYT 82
L + A CP C CKWKGGK+TV C + + +PE +D GTQVL+ S N L +R+
Sbjct: 14 LAITAACPPEVCVCKWKGGKQTVECGGQQLSNLPEGMDPGTQVLNFSGNALQVLQSERFL 73
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
L+NL ++ LS NQ+ + + L EL LS N +Q + E F
Sbjct: 74 RMDLLNLQKIYLSRNQLIRIHEKAFRGLTNLVELDLSENALQNVPSETF 122
Score = 169 (64.5 bits), Expect = 7.4e-25, Sum P(2) = 7.4e-25
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 134 VPKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGL 193
+ L E AC P + P + E N++++C P PK+ W+F ++++N S +
Sbjct: 246 IKSLQREQLACLPEVSPQSSYTEVSEGRNMSITCLVRAIPEPKVLWLFNGQVMSN-DSLM 304
Query: 194 ANMNKRQYIIKTIN------SLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKV 247
N++ YI +TI S + I V D+G ++C +N AG F+N +L VI
Sbjct: 305 DNLHMYYYIDETIGVSGAEEKRSEIFIYNVGAEDNGTFSCVGQNIAGTTFSNYTLRVIIK 364
Query: 248 ETAVAQ----P-DPV-YLVASLTTVVTIILTACFVVLCIILLKAKR 287
E V P D + Y+VAS I + V+LC I++K K+
Sbjct: 365 EPPVVNEVSFPRDYMNYIVASSAGGGIIFV----VLLCTIVVKCKK 406
Score = 120 (47.3 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 39/99 (39%), Positives = 52/99 (52%)
Query: 36 PSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVEL 92
P T + G VL +++ F + + L++ Q + LS N L R FR L NLVEL
Sbjct: 52 PGTQVLNFSGNALQVL-QSERFLRM-DLLNL--QKIYLSRNQLIRIHEKAFRGLTNLVEL 107
Query: 93 DLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
DLS N +Q VPS L L LSGNPI+++ AF
Sbjct: 108 DLSENALQNVPSETFQDYSSLMRLSLSGNPIRELKTSAF 146
Score = 81 (33.6 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 71 LDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
LDLS+N L TF+ +L+ L LS N I+ + + + L L+LS +++I
Sbjct: 107 LDLSENALQNVPSETFQDYSSLMRLSLSGNPIRELKTSAFRHLSFLTTLELSNCQVERIE 166
Query: 128 HEAFINVPKL 137
+EAF+ + L
Sbjct: 167 NEAFVGMDNL 176
Score = 51 (23.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 71 LDLSDN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI- 126
L LS N L FR L L L+LS Q++ + + + L L+L GN I I
Sbjct: 131 LSLSGNPIRELKTSAFRHLSFLTTLELSNCQVERIENEAFVGMDNLEWLRLDGNRIGFIQ 190
Query: 127 -TH 128
TH
Sbjct: 191 GTH 193
>MGI|MGI:2144814 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10090 "Mus musculus" [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
MGI:MGI:2144814 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:145581
eggNOG:NOG249839 KO:K16358 OMA:NAQCCKA OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 EMBL:AK034245
EMBL:AK048443 EMBL:AK220546 EMBL:BC052038 IPI:IPI00226604
IPI:IPI00227586 RefSeq:NP_848829.2 UniGene:Mm.28802
ProteinModelPortal:Q8BXA0 SMR:Q8BXA0 STRING:Q8BXA0
PhosphoSite:Q8BXA0 PaxDb:Q8BXA0 PRIDE:Q8BXA0
Ensembl:ENSMUST00000055815 Ensembl:ENSMUST00000119481 GeneID:238205
KEGG:mmu:238205 UCSC:uc007nqm.1 UCSC:uc007nqn.1 NextBio:383687
Bgee:Q8BXA0 Genevestigator:Q8BXA0 Uniprot:Q8BXA0
Length = 719
Score = 157 (60.3 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 19 YIMVLVCTGCLQVFAE-CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
++ L G + V A+ CP C C+ LC K +P +D T L L+DNF
Sbjct: 4 FLFYLFLIG-IAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNF 62
Query: 78 ---LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
+ R F + +LV+L LS N I F+ H + LR L L+ N + KIT++ F +
Sbjct: 63 VTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGL 122
Query: 135 PKLN 138
L+
Sbjct: 123 SNLH 126
Score = 152 (58.6 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 46/150 (30%), Positives = 71/150 (47%)
Query: 115 ELKLSGNPIQKITHEAFINVPKLNLEDFACSPN-IRPITPDVTAEENENVTLSCRATGSP 173
+L+ +P +T F ++P+ E+F C P I T ++ E + TL C+A G P
Sbjct: 259 DLETCASPAL-LTGRYFWSIPE---EEFLCEPPLITRHTHEMRVLEGQRATLRCKARGDP 314
Query: 174 VPKIKWIFKE-KIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232
P I WI E K+I+N + L N L I+ T+ D+G +TC A N
Sbjct: 315 EPAIHWISPEGKLISNATRSLVYDN------------GTLDILITTVKDTGAFTCIASNP 362
Query: 233 AGEVFTNISLNVIKVE------TAVAQPDP 256
AGE + L++IK+ + +PDP
Sbjct: 363 AGEATQTVDLHIIKLPHLLNSTNHIHEPDP 392
Score = 78 (32.5 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 69 QVLDLSDNFLDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
+ L L+ N L + T F L NL L L+ NQ+ + S D + L EL LS N ++
Sbjct: 102 RALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLET 161
Query: 126 ITHEA 130
I +A
Sbjct: 162 IPWDA 166
Score = 56 (24.8 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 56 NFTTIP----EQLDVGTQVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVP 103
N TIP E++ V L L N +D TF L + LD++ N++Q +P
Sbjct: 158 NLETIPWDAVEKM-VSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLP 211
>RGD|1309357 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10116 "Rattus norvegicus" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 RGD:1309357 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 EMBL:CH473947 CTD:145581 KO:K16358 OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 IPI:IPI00367330
RefSeq:NP_001101494.1 UniGene:Rn.224998 ProteinModelPortal:D4A1J9
Ensembl:ENSRNOT00000007520 GeneID:314164 KEGG:rno:314164
NextBio:667230 ArrayExpress:D4A1J9 Uniprot:D4A1J9
Length = 719
Score = 157 (60.3 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 19 YIMVLVCTGCLQVFAE-CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
++ L G + V A+ CP C C+ LC K +P +D T L L+DNF
Sbjct: 4 FLFYLFLIG-IAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNF 62
Query: 78 ---LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
+ R F + +LV+L LS N I F+ H + LR L L+ N + KIT++ F +
Sbjct: 63 VTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGL 122
Query: 135 PKLN 138
L+
Sbjct: 123 SNLH 126
Score = 150 (57.9 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 46/150 (30%), Positives = 71/150 (47%)
Query: 115 ELKLSGNPIQKITHEAFINVPKLNLEDFACSPN-IRPITPDVTAEENENVTLSCRATGSP 173
+L+ +P +T F ++P+ E+F C P I T ++ E + TL C+A G P
Sbjct: 259 DLETCASPAL-LTGRYFWSIPE---EEFLCEPPLITRHTHEMRVLEGQRATLRCKARGDP 314
Query: 174 VPKIKWIFKE-KIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232
P I WI E K+I+N + L N L I+ T+ D+G +TC A N
Sbjct: 315 EPAIHWISPEGKLISNATRSLVYDN------------GTLDILITTVKDTGAFTCIASNP 362
Query: 233 AGEVFTNISLNVIKVE------TAVAQPDP 256
AGE + L++IK+ + +PDP
Sbjct: 363 AGEATQTMDLHIIKLPHLLNSTNNIHEPDP 392
Score = 78 (32.5 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 69 QVLDLSDNFLDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
+ L L+ N L + T F L NL L L+ NQ+ + S D + L EL LS N ++
Sbjct: 102 RALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLET 161
Query: 126 ITHEA 130
I +A
Sbjct: 162 IPWDA 166
Score = 56 (24.8 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 56 NFTTIP----EQLDVGTQVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVP 103
N TIP E++ V L L N +D TF L + LD++ N++Q +P
Sbjct: 158 NLETIPWDAVEKM-VSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLP 211
>FB|FBgn0032484 [details] [associations]
symbol:kek4 "kekkon4" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00700000104028 HSSP:P13596 FlyBase:FBgn0032484
EMBL:AF507920 RefSeq:NP_609615.2 UniGene:Dm.417 SMR:Q9VK22
EnsemblMetazoa:FBtr0080485 GeneID:34718 KEGG:dme:Dmel_CG9431
UCSC:CG9431-RA CTD:34718 InParanoid:Q9VK22 OMA:PRIPEDI
GenomeRNAi:34718 NextBio:789865 Uniprot:Q9VK22
Length = 649
Score = 153 (58.9 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 48/166 (28%), Positives = 80/166 (48%)
Query: 140 EDFACSPNIRPITPDVTAEEN---ENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
E FAC P I + P ++ N ENVTL CR GSP I W + ++ + S + ++
Sbjct: 272 EAFACKPKI--VYPTLSTSINTSKENVTLICRVHGSPNTVIAWDYTNQVYESRSKPVKSL 329
Query: 197 NKRQYIIKTINS-------------LSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLN 243
K++ I+ + +S LTIV SD G+YTC A+N G+ +IS+
Sbjct: 330 QKQRIYIELLREDESKIRKFGHDVFVSRLTIVNARKSDEGVYTCLAENPGGKDSVHISVV 389
Query: 244 VIKVETAVAQPDP-VYLVASLTTVVTIILTACF-VVLCIILLKAKR 287
V K ++ D + + L + + ++ F +V C+I + K+
Sbjct: 390 VQKDMERISLIDSNFFAIVCLIAMGFLSMSILFSLVTCLIFKRFKQ 435
Score = 131 (51.2 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 36/139 (25%), Positives = 65/139 (46%)
Query: 1 MDHDECADDV--MMIYEWRVYIMVLVC-TGCLQVFAECPSTCECKWKGGKETVLCKAKNF 57
+ D C+ + + ++ +++Y + L+ + +C C CKW GK+T C+ +
Sbjct: 5 LSFDPCSISLKHLSLFLFKIYCLALIFRSASADWLLDC-GNCHCKWNSGKKTADCRNLSL 63
Query: 58 TTIPEQLDVGTQVLDLSDN---FLDRYTF--RKLINLVELDLSYNQIQFVPSHILDSILE 112
+ +PE L QVLDLS N +L+ F L NL +L + ++++ +
Sbjct: 64 SGVPEYLSPEVQVLDLSHNHIFYLEENAFLTTHLQNLQKLLIRNGTLKYLNQRSFTQLQI 123
Query: 113 LRELKLSGNPIQKITHEAF 131
L EL LS N + + F
Sbjct: 124 LIELDLSNNLLVDLLPNVF 142
Score = 91 (37.1 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 20/62 (32%), Positives = 39/62 (62%)
Query: 77 FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
+L++ +F +L L+ELDLS N + + ++ D + ++R + L+GN +Q + H F N+
Sbjct: 112 YLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSKVRAIFLNGNLLQALRHGVFRNLKY 171
Query: 137 LN 138
L+
Sbjct: 172 LH 173
Score = 61 (26.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 71 LDLSDNFL-DRY--TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
LDLS+N L D F L + + L+ N +Q + + ++ L +++L N + I
Sbjct: 127 LDLSNNLLVDLLPNVFDCLSKVRAIFLNGNLLQALRHGVFRNLKYLHKIELKRNRLVSID 186
Query: 128 HEAFINVPKLN 138
+AF+ VP L+
Sbjct: 187 AKAFVGVPLLS 197
Score = 58 (25.5 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 21/83 (25%), Positives = 42/83 (50%)
Query: 60 IPEQLDVGTQV--LDLSDNFLD--RY-TFRKLINLVELDLSYNQIQFVPSHILDSILELR 114
+P D ++V + L+ N L R+ FR L L +++L N++ + + + L
Sbjct: 138 LPNVFDCLSKVRAIFLNGNLLQALRHGVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLLS 197
Query: 115 ELKLSGNPIQKITHEAFINVPKL 137
++ L N + K+ E+F ++ KL
Sbjct: 198 QIYLDNNELTKLRVESFQDLTKL 220
>FB|FBgn0031016 [details] [associations]
symbol:kek5 "kekkon5" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030510 "regulation of BMP signaling pathway" evidence=IDA]
InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030510 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00700000104028 HSSP:Q10466 FlyBase:FBgn0031016
EMBL:BT023770 RefSeq:NP_001245746.1 RefSeq:NP_573382.1
RefSeq:NP_728242.1 RefSeq:NP_728243.1 UniGene:Dm.33776 SMR:Q9VWI6
MINT:MINT-297003 EnsemblMetazoa:FBtr0074707
EnsemblMetazoa:FBtr0074708 EnsemblMetazoa:FBtr0309223
EnsemblMetazoa:FBtr0309224 GeneID:32930 KEGG:dme:Dmel_CG12199
UCSC:CG12199-RA CTD:32930 InParanoid:Q9VWI6 OMA:YDNLGLR
GenomeRNAi:32930 NextBio:781084 Uniprot:Q9VWI6
Length = 931
Score = 145 (56.1 bits), Expect = 6.1e-15, Sum P(3) = 6.1e-15
Identities = 39/146 (26%), Positives = 66/146 (45%)
Query: 140 EDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKR 199
E+FAC P I ++N++L CR GSP P + W++ ++ + + +
Sbjct: 273 ENFACRPRILGSVRSFIEANHDNISLPCRIVGSPRPNVTWVYNKRPLQQYDPRVRVLTSV 332
Query: 200 QYIIKTINSL--SNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVI-KVETAVAQPDP 256
+ + + + + S L IV V SD G YTC A N G L V AV+ D
Sbjct: 333 EQMPEQPSQVLTSELRIVGVRASDKGAYTCVADNRGGRAEAEFQLLVSGDYAGAVSASDG 392
Query: 257 VYLVASLTTVVTIILTACFVVLCIIL 282
+ + A + T F+++C+I+
Sbjct: 393 MGMGAIGAPTIDP-QTNMFLIICLII 417
Score = 127 (49.8 bits), Expect = 6.1e-15, Sum P(3) = 6.1e-15
Identities = 39/135 (28%), Positives = 61/135 (45%)
Query: 10 VMMIYEWRVYIMVLV--CTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVG 67
++++ V +M L G C TC C+W GK++ CK K T IP+ +
Sbjct: 16 ILLLLGVLVVLMALPPPTAGTTDWMQSC-GTCHCQWNSGKKSADCKNKALTKIPQDMSNE 74
Query: 68 TQVLDLSDNFL-----DRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
QVLD + N + + + L N+ ++ L IQ V + L EL LSGN
Sbjct: 75 MQVLDFAHNQIPELRREEFLLAGLPNVHKIFLRNCTIQEVHREAFKGLHILIELDLSGNR 134
Query: 123 IQKITHEAFINVPKL 137
I+++ F + KL
Sbjct: 135 IRELHPGTFAGLEKL 149
Score = 76 (31.8 bits), Expect = 9.1e-10, Sum P(3) = 9.1e-10
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 80 RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNL 139
R F+ L L+ELDLS N+I+ + + +LR + ++ N I+ + + F+N+ L+
Sbjct: 116 REAFKGLHILIELDLSGNRIRELHPGTFAGLEKLRNVIINNNEIEVLPNHLFVNLSFLSR 175
Query: 140 EDF 142
+F
Sbjct: 176 IEF 178
Score = 61 (26.5 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 17/71 (23%), Positives = 35/71 (49%)
Query: 71 LDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
LDLS N + TF L L + ++ N+I+ +P+H+ ++ L ++ N ++++
Sbjct: 128 LDLSGNRIRELHPGTFAGLEKLRNVIINNNEIEVLPNHLFVNLSFLSRIEFRNNRLRQVQ 187
Query: 128 HEAFINVPKLN 138
F L+
Sbjct: 188 LHVFAGTMALS 198
Score = 54 (24.1 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L + F L L ++ N+++ V H+ + L + L N + + E F ++ KL
Sbjct: 162 LPNHLFVNLSFLSRIEFRNNRLRQVQLHVFAGTMALSAISLEQNRLSHLHKETFKDLQKL 221
Score = 38 (18.4 bits), Expect = 6.1e-15, Sum P(3) = 6.1e-15
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 342 EYSSVPLSDTTRGPEPR 358
E SV +SDTT P R
Sbjct: 526 EAVSVAMSDTTTTPRSR 542
Score = 38 (18.4 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 81 YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGN 121
+ F + L + L N++ + + +L L L GN
Sbjct: 189 HVFAGTMALSAISLEQNRLSHLHKETFKDLQKLMHLSLQGN 229
>ZFIN|ZDB-GENE-080219-38 [details] [associations]
symbol:zgc:172282 "zgc:172282" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-080219-38 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG052352 EMBL:BC171440 IPI:IPI00882605 UniGene:Dr.85826
ProteinModelPortal:B7ZV32 Uniprot:B7ZV32
Length = 687
Score = 140 (54.3 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 45/150 (30%), Positives = 70/150 (46%)
Query: 115 ELKLSGNPIQKITHEAFINVPKLNLEDFACSPN-IRPITPDVTAEENENVTLSCRATGSP 173
+L+ +P +T + F +P+ E+F C P I +P A E + +L C+A G P
Sbjct: 260 DLETCASP-PDLTAKYFWTIPE---EEFICDPPVITRKSPKTFAMEGQPTSLKCKANGDP 315
Query: 174 VPKIKWIFKE-KIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232
P + WI E ++IAN S L+ N +L I ++ D+GI+TC A N
Sbjct: 316 DPDVHWISPEGRLIANTSRTLSFSN------------GSLEINITSLKDTGIFTCIASNA 363
Query: 233 AGEVFTNISLNVIKVE------TAVAQPDP 256
AGE + L V + + +PDP
Sbjct: 364 AGESTGTVELVVSPLPHLANSTNRIREPDP 393
Score = 122 (48.0 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 33/126 (26%), Positives = 54/126 (42%)
Query: 15 EWRVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
EW ++ ++L+ CP C C+ +LC +P +D T L L+
Sbjct: 2 EWLIFSLLLLAVSASGQL--CPKRCMCQNLSPSLAILCAKTGLLFVPTVIDRRTVELRLT 59
Query: 75 DNFLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
+NF+ R F + +L+ L LS N I + + + LR L L N + IT + F
Sbjct: 60 ENFITAVKRRDFANMTSLLHLTLSRNTISQIMPYTFADLKRLRALHLDSNRLSVITDDHF 119
Query: 132 INVPKL 137
+ L
Sbjct: 120 RGLTNL 125
>WB|WBGene00004257 [details] [associations]
symbol:pxn-2 species:6239 "Caenorhabditis elegans"
[GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0010172 "embryonic body morphogenesis"
evidence=IMP] [GO:0016203 "muscle attachment" evidence=IMP]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0071711 "basement
membrane organization" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0048681 "negative regulation of axon
regeneration" evidence=IMP] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006979 InterPro:IPR003598 SMART:SM00408 InterPro:IPR003591
SMART:SM00369 GO:GO:0020037 GO:GO:0016203 GO:GO:0004601
GO:GO:0005604 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0071711 GO:GO:0010172
SUPFAM:SSF48113 Gene3D:1.10.640.10 GO:GO:0048681 EMBL:Z68006
HSSP:P05164 GeneTree:ENSGT00550000074325 EMBL:Z68005 PIR:T23007
RefSeq:NP_509834.1 ProteinModelPortal:G5EG78 SMR:G5EG78
EnsemblMetazoa:K09C8.5 GeneID:181288 KEGG:cel:CELE_K09C8.5
CTD:181288 WormBase:K09C8.5 OMA:MEFERNG NextBio:913292
Uniprot:G5EG78
Length = 1328
Score = 138 (53.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 37/95 (38%), Positives = 51/95 (53%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVE 91
CPS C C G + V C+ KN T IP + + T L S+N L+ + F+ L NL
Sbjct: 17 CPSECRC---AGLD-VHCEGKNLTAIPGHIPIATTNLYFSNNLLNSLSKSNFQALPNLQY 72
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
LDLS N I+ + +LDS L+ L LS N I+ +
Sbjct: 73 LDLSNNSIRDIEETLLDSFPGLKYLDLSWNKIRYV 107
Score = 123 (48.4 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 35/91 (38%), Positives = 45/91 (49%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLT 213
D A + VTL C A G PVP + W+F E I + N R Y I N++ LT
Sbjct: 453 DTNATIGQQVTLRCNAKGFPVPDVVWLF-EGI------RIPRRNTR-YTISD-NNIE-LT 502
Query: 214 IVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
I VT DSG++TC+A N G +L V
Sbjct: 503 IEKVTRHDSGVFTCQAVNSVGSAVATANLLV 533
Score = 96 (38.9 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 30/116 (25%), Positives = 52/116 (44%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLT 213
D T+ + E + L C A+G P P I W+F+++ + S + K ++K L+
Sbjct: 360 DTTSRDGETLELKCEASGEPTPTITWLFEKQKLTE--SRKHKLTKNGSVLKIFPFLN--- 414
Query: 214 IVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLTTVVTI 269
+D G Y C A NG S+++ + E V P+ A++ VT+
Sbjct: 415 ------TDIGQYECVASNGEESKSHIFSVSLKESEQPVIIDAPMDTNATIGQQVTL 464
>MGI|MGI:2442298 [details] [associations]
symbol:Lingo2 "leucine rich repeat and Ig domain containing
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2442298 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
HSSP:Q15772 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HOVERGEN:HBG057546 CTD:158038 OMA:DQDSGMY
OrthoDB:EOG4NS3B7 EMBL:AK035778 EMBL:AK045639 EMBL:AK141568
EMBL:BC090619 EMBL:BC145692 IPI:IPI00341267 RefSeq:NP_001159471.1
RefSeq:NP_001159472.1 RefSeq:NP_001159473.1 RefSeq:NP_780725.2
UniGene:Mm.132507 ProteinModelPortal:Q3URE9 SMR:Q3URE9
PhosphoSite:Q3URE9 PaxDb:Q3URE9 PRIDE:Q3URE9
Ensembl:ENSMUST00000065173 Ensembl:ENSMUST00000098151
Ensembl:ENSMUST00000108122 Ensembl:ENSMUST00000108124
Ensembl:ENSMUST00000164772 GeneID:242384 KEGG:mmu:242384
InParanoid:Q3URE9 NextBio:385317 Bgee:Q3URE9 CleanEx:MM_LINGO2
Genevestigator:Q3URE9 Uniprot:Q3URE9
Length = 606
Score = 140 (54.3 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 16 WRVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSD 75
W+ ++ + V + CP+ CEC + ++V C + IPE + + T++LDLS
Sbjct: 9 WQPFLGLAVVLLLMGSTIGCPARCECSAQN--KSVSCHRRRLLAIPEGIPIETKILDLSK 66
Query: 76 NFLDRYTFRKLIN---LVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFI 132
N L + I+ L E+DLS N I V +++ LR L+L GN ++ + F
Sbjct: 67 NRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFT 126
Query: 133 ---NVPKLNLED 141
N+ KL++ +
Sbjct: 127 GLSNLTKLDISE 138
Score = 108 (43.1 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 44/133 (33%), Positives = 57/133 (42%)
Query: 142 FACS-PNIRPIT-PDVTAEENENVTLSCRATGSPVPKIKWIF-KEKIIANISSGLANMNK 198
F C P IR + +E + V L C A G P P I W+ + + I S+G A
Sbjct: 405 FTCKKPKIREKKLQHLLVDEGQTVQLECNADGDPQPVISWVTPRRRFITTKSNGRA---- 460
Query: 199 RQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG-EVFTNISLNVIKVETA----VAQ 253
T+ L I DSG+Y C A N AG + FT SL V K T+ A
Sbjct: 461 ------TVLGDGTLEIRFAQDQDSGMYVCIASNAAGNDTFT-ASLTV-KGFTSDRFLYAN 512
Query: 254 PDPVYLVASLTTV 266
P+Y+ S TV
Sbjct: 513 RTPMYMTDSNDTV 525
Score = 80 (33.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF---INVPKLNL 139
F L NL +LD+S N+I + ++ + L+ L++ N + I+H AF +++ +L L
Sbjct: 125 FTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTL 184
Query: 140 E 140
E
Sbjct: 185 E 185
Score = 67 (28.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 71 LDLSDN----FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
LD+S+N LD Y F+ L NL L++ N + ++ +L L +L L + +
Sbjct: 134 LDISENKIVILLD-YMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAV 192
Query: 127 THEAFINVPKL 137
EA ++ L
Sbjct: 193 PTEALSHLRSL 203
Score = 60 (26.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 87 INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSP 146
+NL L ++ + VP ++ L L LS NPI I F ++ +L E
Sbjct: 249 LNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQ-ELHIVGA 307
Query: 147 NIRPITP 153
+R I P
Sbjct: 308 QLRTIEP 314
Score = 56 (24.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 23/94 (24%), Positives = 43/94 (45%)
Query: 56 NFTTIP-EQLD-----VGTQVLDLSDNFLDRYTFRKLINLVELDLSY-NQIQFVPSHILD 108
N T +P E L + + L+ N + Y F++L +L L++ Y + +P++ L
Sbjct: 188 NLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEIDYWPLLDLMPANSLY 247
Query: 109 SILELRELKLSGNPIQKITHEAF---INVPKLNL 139
L L L ++ + + AF + + LNL
Sbjct: 248 G-LNLTSLSITNTNLSTVPFLAFKHLVYLTHLNL 280
Score = 52 (23.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 111 LELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNI 148
+E + L LS N ++ I E FI+ P L E+ S NI
Sbjct: 57 IETKILDLSKNRLKSINPEEFISYPLL--EEIDLSDNI 92
>UNIPROTKB|Q7L985 [details] [associations]
symbol:LINGO2 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471071
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 HOGENOM:HOG000246971
HOVERGEN:HBG057546 EMBL:AY358114 EMBL:AK056372 EMBL:AK172834
EMBL:AK290972 EMBL:BC137514 IPI:IPI00001120 RefSeq:NP_001245211.1
RefSeq:NP_689783.1 UniGene:Hs.662661 UniGene:Hs.739574
ProteinModelPortal:Q7L985 SMR:Q7L985 STRING:Q7L985
PhosphoSite:Q7L985 DMDM:172046190 PaxDb:Q7L985 PRIDE:Q7L985
Ensembl:ENST00000308675 Ensembl:ENST00000379992 GeneID:158038
KEGG:hsa:158038 UCSC:uc003zqu.1 CTD:158038 GeneCards:GC09M027940
HGNC:HGNC:21207 HPA:CAB025361 HPA:HPA016633 MIM:609793
neXtProt:NX_Q7L985 PharmGKB:PA162394096 InParanoid:Q7L985
OMA:DQDSGMY OrthoDB:EOG4NS3B7 PhylomeDB:Q7L985 GenomeRNAi:158038
NextBio:87602 Bgee:Q7L985 CleanEx:HS_LINGO2 Genevestigator:Q7L985
Uniprot:Q7L985
Length = 606
Score = 139 (54.0 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 16 WRVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSD 75
W+ ++ + V + CP+ CEC + ++V C + IPE + + T++LDLS
Sbjct: 9 WQPFLGLAVVLIFMGSTIGCPARCECSAQN--KSVSCHRRRLIAIPEGIPIETKILDLSK 66
Query: 76 NFLDRYTFRKLIN---LVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFI 132
N L + I+ L E+DLS N I V +++ LR L+L GN ++ + F
Sbjct: 67 NRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFT 126
Query: 133 ---NVPKLNLED 141
N+ KL++ +
Sbjct: 127 GLSNLTKLDISE 138
Score = 105 (42.0 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 41/132 (31%), Positives = 55/132 (41%)
Query: 142 FACS-PNIRPIT-PDVTAEENENVTLSCRATGSPVPKIKWIF-KEKIIANISSGLANMNK 198
F C P IR + +E + V L C A G P P I W+ + + I S+G A
Sbjct: 405 FTCKKPKIREKKLQHLLVDEGQTVQLECSADGDPQPVISWVTPRRRFITTKSNGRA---- 460
Query: 199 RQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG-EVFTNISLNVIKVET---AVAQP 254
T+ L I DSG+Y C A N AG + FT SL V + A
Sbjct: 461 ------TVLGDGTLEIRFAQDQDSGMYVCIASNAAGNDTFT-ASLTVKGFASDRFLYANR 513
Query: 255 DPVYLVASLTTV 266
P+Y+ S T+
Sbjct: 514 TPMYMTDSNDTI 525
Score = 73 (30.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 71 LDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPI 123
+DLSDN + F L NL L L N+++ VP + + L +L +S N I
Sbjct: 86 IDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKI 141
Score = 67 (28.6 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 71 LDLSDN----FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
LD+S+N LD Y F+ L NL L++ N + ++ +L L +L L + +
Sbjct: 134 LDISENKIVILLD-YMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAV 192
Query: 127 THEAFINVPKL 137
EA ++ L
Sbjct: 193 PTEALSHLRSL 203
Score = 59 (25.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 87 INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSP 146
+NL L ++ + VP ++ L L LS NPI I F ++ +L E
Sbjct: 249 LNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQ-ELHIVGA 307
Query: 147 NIRPITP 153
+R I P
Sbjct: 308 QLRTIEP 314
Score = 55 (24.4 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 23/94 (24%), Positives = 43/94 (45%)
Query: 56 NFTTIP-EQLD-----VGTQVLDLSDNFLDRYTFRKLINLVELDLSY-NQIQFVPSHILD 108
N T +P E L + + L+ N + Y F++L +L L++ Y + +P++ L
Sbjct: 188 NLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLY 247
Query: 109 SILELRELKLSGNPIQKITHEAF---INVPKLNL 139
L L L ++ + + AF + + LNL
Sbjct: 248 G-LNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNL 280
>MGI|MGI:2385612 [details] [associations]
symbol:Lrfn4 "leucine rich repeat and fibronectin type III
domain containing 4" species:10090 "Mus musculus" [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 MGI:MGI:2385612 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:78999 KO:K16357
OMA:PHGGNGS OrthoDB:EOG4GTKCM EMBL:DQ078786 EMBL:AK081560
EMBL:AK163603 EMBL:BC023036 EMBL:BC023156 IPI:IPI00330802
RefSeq:NP_700437.2 UniGene:Mm.329675 ProteinModelPortal:Q80XU8
SMR:Q80XU8 STRING:Q80XU8 PhosphoSite:Q80XU8 PaxDb:Q80XU8
PRIDE:Q80XU8 Ensembl:ENSMUST00000053597 Ensembl:ENSMUST00000113822
GeneID:225875 KEGG:mmu:225875 UCSC:uc008gah.2 InParanoid:Q460G5
NextBio:377837 Bgee:Q80XU8 Genevestigator:Q80XU8
GermOnline:ENSMUSG00000045045 Uniprot:Q80XU8
Length = 636
Score = 124 (48.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD 79
+++L+ +G A CP C C+ + LC + +P +D T L L+DNF+
Sbjct: 6 LLLLLASGA----AACPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVELRLADNFIQ 61
Query: 80 RY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
FR + LV+L LS N I + + + LR L L GN + ++ + + P
Sbjct: 62 ALGPPDFRNMTGLVDLTLSRNAITRIGARSFGDLESLRSLHLDGNRLVELGSSS-LRGP- 119
Query: 137 LNLEDFACSPN 147
+NL+ S N
Sbjct: 120 VNLQHLILSGN 130
Score = 120 (47.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 40/133 (30%), Positives = 57/133 (42%)
Query: 141 DFACSPN-IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-KIIANISSGLANMNK 198
+F+C P I T + E + TL CRA G PVP + W+ + +++ N S A N
Sbjct: 275 EFSCEPPLIARHTQRLWVLEGQRATLRCRALGDPVPTMHWVGPDDRLVGNSSRAWAFPN- 333
Query: 199 RQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKV----ETAV--A 252
L I D+G YTC A N AGE + L V+ + T+
Sbjct: 334 -----------GTLEIGVTGAGDAGAYTCIATNPAGEATARVELRVLALPHGGNTSAEGG 382
Query: 253 QPDPVYLVASLTT 265
+P P + AS T
Sbjct: 383 RPGPSDIAASART 395
Score = 75 (31.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 29/93 (31%), Positives = 43/93 (46%)
Query: 66 VGTQVLDLSDNFLDRYT---FRKLINLVE-LDLSYNQIQFVPSHILDSILELRELKLSGN 121
V Q L LS N L R F ++ +E LD+SYN ++ VP + S+ L L L N
Sbjct: 120 VNLQHLILSGNQLGRIAPGAFDDFLDSLEDLDVSYNNLRQVPWAGIGSMPALHTLNLDHN 179
Query: 122 PIQKITHEAFINVPKLNLEDFACSPNIRPITPD 154
I + F + +L+ D S + + PD
Sbjct: 180 LIDALPPGVFAQLSQLSRLDLT-SNRLATLAPD 211
Score = 62 (26.9 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 28/85 (32%), Positives = 42/85 (49%)
Query: 71 LDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
L LS N + R +F L +L L L N++ + S L + L+ L LSGN + +I
Sbjct: 77 LTLSRNAITRIGARSFGDLESLRSLHLDGNRLVELGSSSLRGPVNLQHLILSGNQLGRIA 136
Query: 128 HEAFINVPKLNLEDFACS-PNIRPI 151
AF + +LED S N+R +
Sbjct: 137 PGAFDDFLD-SLEDLDVSYNNLRQV 160
>RGD|1585286 [details] [associations]
symbol:Lrfn4 "leucine rich repeat and fibronectin type III
domain containing 4" species:10116 "Rattus norvegicus" [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
RGD:1585286 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473953
GeneTree:ENSGT00660000095307 CTD:78999 KO:K16357 OMA:PHGGNGS
OrthoDB:EOG4GTKCM IPI:IPI00195375 RefSeq:NP_001102978.1
UniGene:Rn.198548 ProteinModelPortal:D4ABX8
Ensembl:ENSRNOT00000026169 GeneID:688721 KEGG:rno:688721
UCSC:RGD:1585286 NextBio:737115 Uniprot:D4ABX8
Length = 636
Score = 124 (48.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD 79
+++L+ +G A CP C C+ + LC + +P +D T L L+DNF+
Sbjct: 6 LLLLLASGA----AACPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVELRLADNFIQ 61
Query: 80 RY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
FR + LV+L LS N I + + + LR L L GN + ++ + + P
Sbjct: 62 ALGPPDFRNMTGLVDLTLSRNAITRIGARSFGDLESLRSLHLDGNRLVELGSSS-LRGP- 119
Query: 137 LNLEDFACSPN 147
+NL+ S N
Sbjct: 120 VNLQHLILSGN 130
Score = 120 (47.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 40/133 (30%), Positives = 57/133 (42%)
Query: 141 DFACSPN-IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-KIIANISSGLANMNK 198
+F+C P I T + E + TL CRA G PVP + W+ + +++ N S A N
Sbjct: 275 EFSCEPPLIARHTQRLWVLEGQRATLRCRALGDPVPTMHWVGPDDRLVGNSSRAWAFPN- 333
Query: 199 RQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKV----ETAV--A 252
L I D+G YTC A N AGE + L V+ + T+
Sbjct: 334 -----------GTLEIGVTGAGDAGAYTCIATNPAGEATARVELRVLALPHGGNTSAEGG 382
Query: 253 QPDPVYLVASLTT 265
+P P + AS T
Sbjct: 383 RPGPSDIAASART 395
Score = 75 (31.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 29/93 (31%), Positives = 43/93 (46%)
Query: 66 VGTQVLDLSDNFLDRYT---FRKLINLVE-LDLSYNQIQFVPSHILDSILELRELKLSGN 121
V Q L LS N L R F ++ +E LD+SYN ++ VP + S+ L L L N
Sbjct: 120 VNLQHLILSGNQLGRIAPGAFDDFLDSLEDLDVSYNNLRQVPWAGIGSMPALHTLNLDHN 179
Query: 122 PIQKITHEAFINVPKLNLEDFACSPNIRPITPD 154
I + F + +L+ D S + + PD
Sbjct: 180 LIDALPPGVFAQLSQLSRLDLT-SNRLATLAPD 211
Score = 62 (26.9 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 28/85 (32%), Positives = 42/85 (49%)
Query: 71 LDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
L LS N + R +F L +L L L N++ + S L + L+ L LSGN + +I
Sbjct: 77 LTLSRNAITRIGARSFGDLESLRSLHLDGNRLVELGSSSLRGPVNLQHLILSGNQLGRIA 136
Query: 128 HEAFINVPKLNLEDFACS-PNIRPI 151
AF + +LED S N+R +
Sbjct: 137 PGAFDDFLD-SLEDLDVSYNNLRQV 160
>MGI|MGI:2444651 [details] [associations]
symbol:Lingo4 "leucine rich repeat and Ig domain containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2444651 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
HOVERGEN:HBG057546 CTD:339398 eggNOG:NOG306417 OrthoDB:EOG49KFQ7
EMBL:BC117866 EMBL:BC117867 EMBL:AK042286 IPI:IPI00273210
RefSeq:NP_796224.1 UniGene:Mm.213001 ProteinModelPortal:Q149C3
SMR:Q149C3 PhosphoSite:Q149C3 PRIDE:Q149C3
Ensembl:ENSMUST00000050975 GeneID:320747 KEGG:mmu:320747
UCSC:uc008qgb.1 InParanoid:Q149C3 NextBio:397357 Bgee:Q149C3
CleanEx:MM_LINGO4 Genevestigator:Q149C3 Uniprot:Q149C3
Length = 593
Score = 143 (55.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 40/129 (31%), Positives = 60/129 (46%)
Query: 16 WRVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSD 75
W + +L+ G + CP+ C+C + V C + TIP L + T++LDLS
Sbjct: 14 WSPLLFLLLLPG--GSISSCPTVCDCTSQ--TRAVFCAHRRLDTIPGGLPLDTELLDLSG 69
Query: 76 NFL---DRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFI 132
N L R +L L ELDLSYNQ+ + + L L+L GN ++ + F
Sbjct: 70 NRLWGLQRGMLSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFS 129
Query: 133 NVPKLNLED 141
+ L L D
Sbjct: 130 GLTALTLLD 138
Score = 97 (39.2 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 32/109 (29%), Positives = 45/109 (41%)
Query: 142 FACSPN-IRPITPD-VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKR 199
F C P IR P V AEE + SC G P P + W+ + + L + +
Sbjct: 408 FTCKPALIRKSGPRWVIAEEGGHAVFSCSGDGDPAPTVSWMRPQ------GAWLGRVGR- 460
Query: 200 QYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVE 248
++ + L I +V + D G Y C N AG L VI+VE
Sbjct: 461 ---VRVLED-GTLEIRSVQLRDRGAYVCVVSNVAGNDSLRTWLEVIQVE 505
>UNIPROTKB|F1NTY3 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:WITPNGS PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00573827 Ensembl:ENSGALT00000012910
ArrayExpress:F1NTY3 Uniprot:F1NTY3
Length = 545
Score = 131 (51.2 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 34/117 (29%), Positives = 56/117 (47%)
Query: 24 VCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDR 80
VC CPS C C + K V+C KN +P+ + T++L+L +N +
Sbjct: 4 VCVAASSGAQTCPSVCSCSNQFSK--VICVRKNLRDVPDGISTNTRLLNLHENQIQIIKV 61
Query: 81 YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
+F+ L +L L LS N I+ + + + L L+L N + I + AF+ + KL
Sbjct: 62 NSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKL 118
Score = 107 (42.7 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 38/138 (27%), Positives = 58/138 (42%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+L F C +P I D+ E + CRA+ S + + WI +
Sbjct: 308 IGELDLNYFTCYAPVIVEPPADLNVTEGMAAEMKCRASTS-LTSVSWITPNGSV------ 360
Query: 193 LANMNKRQYIIK-TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAV 251
M Y ++ + S L VT+ D+G+YTC N G + +LNV TA+
Sbjct: 361 ---MTHGAYRVRIAVLSDGTLNFTKVTVQDTGLYTCMVSNSVGNTTASATLNV----TAL 413
Query: 252 AQPDPVYLVASLTTVVTI 269
P Y S TV T+
Sbjct: 414 DNPGYTYF--STVTVETV 429
Score = 89 (36.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + F L NL L+L N++ +P+ + +L+EL L NPI+
Sbjct: 71 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 130
Query: 126 ITHEAFINVPKLNLED 141
I AF +P L D
Sbjct: 131 IPSYAFNRIPSLRRLD 146
Score = 60 (26.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLN-LEDF 142
L+L NQIQ + + + L L+LS N I+ I AF + LN LE F
Sbjct: 49 LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 100
>ZFIN|ZDB-GENE-040426-1227 [details] [associations]
symbol:mb21d2b "Mab-21 domain containing 2b"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-040426-1227
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00660000095307 EMBL:CABZ01031876
EMBL:CABZ01031877 EMBL:CABZ01072581 EMBL:CU499339 IPI:IPI00995611
Ensembl:ENSDART00000124704 Uniprot:E7EZ70
Length = 742
Score = 126 (49.4 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 37/113 (32%), Positives = 50/113 (44%)
Query: 17 RVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN 76
R+ VLV G L CP C C+ T+LC +P +D T L L+DN
Sbjct: 3 RLVFCVLVF-GALAKAQLCPGRCICQTISPTLTLLCAKTGLLFVPPTVDRKTVELRLTDN 61
Query: 77 FLD---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
F+ R F + +LV L LS N I + H + LR L + GN + I
Sbjct: 62 FITAVRRKDFLNMTSLVHLTLSRNTISQIAPHAFMGLKSLRALHMDGNRLSVI 114
Score = 115 (45.5 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 37/117 (31%), Positives = 53/117 (45%)
Query: 140 EDFACSPNIRPITP-DVTAE---ENENVTLSCRATGSPVPKIKWIFKE-KIIANISSGLA 194
E+F C P + IT VT E + VTL C+A G P P I W F + K++ N
Sbjct: 281 EEFICEPPL--ITKHQVTKPYVMEGQGVTLKCKAMGDPDPAIHWRFPDGKLVHN------ 332
Query: 195 NMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAV 251
N R + L I+ T+ DSG + C A N AG + +++I + V
Sbjct: 333 --NSRTILYDN----GTLDILITTLKDSGAFNCVASNAAGIATAAVHVHMIPLPLLV 383
Score = 69 (29.3 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/78 (26%), Positives = 37/78 (47%)
Query: 78 LDRYTFRKLINLVE-LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
++ +F + + +E LDLSYN ++ +P + + + L L N I I F + K
Sbjct: 138 IEESSFDEFVATIEDLDLSYNNLRTLPWEAIARMTNINTLTLDHNLIDHIGVGTFTLLTK 197
Query: 137 LNLEDFACSPNIRPITPD 154
L D S ++ + PD
Sbjct: 198 LVRLDMT-SNRLQTLPPD 214
Score = 62 (26.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 56 NFTTIP-EQLDVGTQV--LDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHIL 107
N T+P E + T + L L N +D TF L LV LD++ N++Q +P L
Sbjct: 159 NLRTLPWEAIARMTNINTLTLDHNLIDHIGVGTFTLLTKLVRLDMTSNRLQTLPPDTL 216
Score = 59 (25.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 86 LINLVELDLSYNQIQFVPSHILDS-ILELRELKLSGNPIQKITHEAFINVPKLN 138
L+NL L L NQI + D + + +L LS N ++ + EA + +N
Sbjct: 122 LMNLRHLILGNNQIHHIEESSFDEFVATIEDLDLSYNNLRTLPWEAIARMTNIN 175
Score = 48 (22.0 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 90 VELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
VEL L+ N I V ++ L L LS N I +I AF+ + L
Sbjct: 54 VELRLTDNFITAVRRKDFLNMTSLVHLTLSRNTISQIAPHAFMGLKSL 101
>UNIPROTKB|Q1RMS4 [details] [associations]
symbol:LRFN3 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 3" species:9913 "Bos taurus" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 GO:GO:0030424 GO:GO:0030425 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000237343 HOVERGEN:HBG052352
GeneTree:ENSGT00660000095307 EMBL:BC114740 IPI:IPI00689182
RefSeq:NP_001070427.1 UniGene:Bt.55363 ProteinModelPortal:Q1RMS4
Ensembl:ENSBTAT00000000176 GeneID:767839 KEGG:bta:767839 CTD:79414
eggNOG:NOG323197 InParanoid:Q1RMS4 KO:K16356 OMA:WAVGEEE
OrthoDB:EOG4H465G NextBio:20918207 Uniprot:Q1RMS4
Length = 628
Score = 119 (46.9 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 31/95 (32%), Positives = 43/95 (45%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYTFRKLIN---LVE 91
CP C C+ + +VLC +P LD L L+DNF+ R L N L+
Sbjct: 28 CPRRCRCQTQSLPLSVLCPGAGLLFVPPSLDRRAAELRLADNFIATVRRRDLANMTGLLH 87
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
L LS N I+ V + + LR L L GN + +
Sbjct: 88 LSLSRNTIRHVAAGAFSDLRALRALHLDGNRLTSL 122
Score = 118 (46.6 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 30/107 (28%), Positives = 46/107 (42%)
Query: 140 EDFACSPNI-RPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-KIIANISSGLANMN 197
E+F C P + +P + L CRA G P P+++W+ + +++ N S A N
Sbjct: 289 EEFVCEPPVVTHRSPPLAVPAGRPAALRCRAVGDPEPRVRWVSPQGRLLGNSSRARAFPN 348
Query: 198 KRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
L ++ D GI+TC A N AGE + L V
Sbjct: 349 ------------GTLELLVTEPGDGGIFTCIAANAAGEATAAVELTV 383
Score = 69 (29.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 84 RKLINLVELDLSYNQIQFVPSHILDSILE-LRELKLSGNPIQKITHEAFINVPKLN 138
R L+NL L LS NQ+ + + LD E L +L LS N ++++ EA + +N
Sbjct: 128 RGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVN 183
Score = 61 (26.5 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 18/51 (35%), Positives = 21/51 (41%)
Query: 212 LTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVAS 262
L ++ D GI+TC A N AGE VE V P P L S
Sbjct: 351 LELLVTEPGDGGIFTCIAANAAGEA-------TAAVELTVGPPPPPQLANS 394
Score = 56 (24.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 71 LDLSDNFLDRYTFR---KLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
LDLS N L++ + +L N+ L L +N + VP+ + +L L ++ N + I
Sbjct: 161 LDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIP 220
Query: 128 HEA-FINVPKL 137
+ F +P L
Sbjct: 221 PDPLFSRLPLL 231
>UNIPROTKB|Q9BTN0 [details] [associations]
symbol:LRFN3 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 3" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 GO:GO:0030425
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000237343 HOVERGEN:HBG052352 CTD:79414
KO:K16356 OMA:WAVGEEE OrthoDB:EOG4H465G EMBL:AK172754 EMBL:AY358127
EMBL:BC003578 IPI:IPI00001577 RefSeq:NP_078785.1 UniGene:Hs.143792
ProteinModelPortal:Q9BTN0 SMR:Q9BTN0 STRING:Q9BTN0
PhosphoSite:Q9BTN0 DMDM:62286945 PRIDE:Q9BTN0 DNASU:79414
Ensembl:ENST00000246529 GeneID:79414 KEGG:hsa:79414 UCSC:uc002oco.3
GeneCards:GC19P036427 HGNC:HGNC:28370 HPA:HPA048923 MIM:612809
neXtProt:NX_Q9BTN0 PharmGKB:PA134880779 eggNOG:NOG239228
InParanoid:Q9BTN0 PhylomeDB:Q9BTN0 ChiTaRS:LRFN3 GenomeRNAi:79414
NextBio:68379 Bgee:Q9BTN0 CleanEx:HS_LRFN3 Genevestigator:Q9BTN0
GermOnline:ENSG00000126243 Uniprot:Q9BTN0
Length = 628
Score = 118 (46.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 30/107 (28%), Positives = 46/107 (42%)
Query: 140 EDFACSPNI-RPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-KIIANISSGLANMN 197
E+F C P + +P + L CRA G P P+++W+ + +++ N S A N
Sbjct: 289 EEFVCEPPVVTHRSPPLAVPAGRPAALRCRAVGDPEPRVRWVSPQGRLLGNSSRARAFPN 348
Query: 198 KRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
L ++ D GI+TC A N AGE + L V
Sbjct: 349 ------------GTLELLVTEPGDGGIFTCIAANAAGEATAAVELTV 383
Score = 117 (46.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 31/95 (32%), Positives = 43/95 (45%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYTFRKLIN---LVE 91
CP C C+ + +VLC +P LD L L+DNF+ R L N L+
Sbjct: 28 CPRRCRCQTQSLPLSVLCPGAGLLFVPPSLDRRAAELRLADNFIASVRRRDLANMTGLLH 87
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
L LS N I+ V + + LR L L GN + +
Sbjct: 88 LSLSRNTIRHVAAGAFADLRALRALHLDGNRLTSL 122
Score = 69 (29.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 84 RKLINLVELDLSYNQIQFVPSHILDSILE-LRELKLSGNPIQKITHEAFINVPKLN 138
R L+NL L LS NQ+ + + LD E L +L LS N ++++ EA + +N
Sbjct: 128 RGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVN 183
Score = 61 (26.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 18/51 (35%), Positives = 21/51 (41%)
Query: 212 LTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVAS 262
L ++ D GI+TC A N AGE VE V P P L S
Sbjct: 351 LELLVTEPGDGGIFTCIAANAAGEA-------TAAVELTVGPPPPPQLANS 394
Score = 56 (24.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 71 LDLSDNFLDRYTFR---KLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
LDLS N L++ + +L N+ L L +N + VP+ + +L L ++ N + I
Sbjct: 161 LDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIP 220
Query: 128 HEA-FINVPKL 137
+ F +P L
Sbjct: 221 PDPLFSRLPLL 231
>MGI|MGI:2442512 [details] [associations]
symbol:Lrfn3 "leucine rich repeat and fibronectin type III
domain containing 3" species:10090 "Mus musculus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
MGI:MGI:2442512 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 EMBL:CH466593 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:79414 KO:K16356
OMA:WAVGEEE eggNOG:NOG239228 EMBL:DQ078787 EMBL:AK040916
EMBL:BC066999 EMBL:BC094593 IPI:IPI00222949 RefSeq:NP_780687.1
UniGene:Mm.23157 ProteinModelPortal:Q8BLY3 SMR:Q8BLY3 STRING:Q8BLY3
PhosphoSite:Q8BLY3 PaxDb:Q8BLY3 PRIDE:Q8BLY3
Ensembl:ENSMUST00000046351 GeneID:233067 KEGG:mmu:233067
UCSC:uc009gee.1 InParanoid:Q505E2 OrthoDB:EOG43TZV6 NextBio:381527
Bgee:Q8BLY3 Genevestigator:Q8BLY3 GermOnline:ENSMUSG00000036957
Uniprot:Q8BLY3
Length = 626
Score = 119 (46.9 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 31/99 (31%), Positives = 45/99 (45%)
Query: 31 VFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYTFRKLIN-- 88
+ + CP C C+ + +VLC +P LD L L+DNF+ R L N
Sbjct: 24 ISSPCPRRCRCQTQSMPLSVLCPGAGLLFVPPSLDRRAAELRLADNFIAAVRRRDLANMT 83
Query: 89 -LVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
L+ L LS N I+ V + + LR L L GN + +
Sbjct: 84 GLLHLSLSRNTIRHVAAGAFADLRALRALHLDGNRLTSL 122
Score = 113 (44.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 140 EDFACSPNI-RPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-KIIANISSGLANMN 197
E+F C P + +P + L CRA G P P+++W+ + +++ N S A N
Sbjct: 289 EEFVCEPPVVTHRSPPLAVPAGRPAALRCRAVGDPEPRVRWVSPQGRLLGNSSRARAFPN 348
Query: 198 KRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
L ++ D G +TC A N AGE + L V
Sbjct: 349 ------------GTLELLVTEPEDGGTFTCIAANAAGEATAAVELTV 383
Score = 69 (29.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 84 RKLINLVELDLSYNQIQFVPSHILDSILE-LRELKLSGNPIQKITHEAFINVPKLN 138
R L+NL L LS NQ+ + + LD E L +L LS N ++++ EA + +N
Sbjct: 128 RGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVN 183
Score = 56 (24.8 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 71 LDLSDNFLDRYTFR---KLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
LDLS N L++ + +L N+ L L +N + VP+ + +L L ++ N + I
Sbjct: 161 LDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIP 220
Query: 128 HEA-FINVPKL 137
+ F +P L
Sbjct: 221 PDPLFSRLPLL 231
>ZFIN|ZDB-GENE-040924-5 [details] [associations]
symbol:lrit1a "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 1a" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-040924-5 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG108105 EMBL:BC095674 IPI:IPI00498659 UniGene:Dr.82959
ProteinModelPortal:Q502J4 InParanoid:Q502J4 Uniprot:Q502J4
Length = 643
Score = 114 (45.2 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 34/133 (25%), Positives = 60/133 (45%)
Query: 18 VYIMVLVCTGCLQ-VFAECPSTCECKWK----GGK-ETVLCKAKNFTTIPEQLDVGTQVL 71
V++ +L+ +G V + CP+ C C + G + +V+C + +P T L
Sbjct: 5 VFLGLLLASGGFPLVRSTCPTQCSCFYHNLSDGSRARSVICNDPEISLVPASFPGDTSKL 64
Query: 72 DLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITH 128
+ + R F L NL L +S+N + + S + L EL+L GN +
Sbjct: 65 RIEKTAIKRIPSEAFSYLSNLEFLWMSFNVLSSLNSDSFRGLYSLEELRLDGNSLSSFPW 124
Query: 129 EAFINVPKLNLED 141
E+ +++P L L D
Sbjct: 125 ESLMDMPSLRLLD 137
Score = 106 (42.4 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM-NKRQYIIK 204
P + V + NV L C G+P+P++ W + +G + N ++ I+
Sbjct: 252 PRVHTAVARVRSAVGNNVLLRCGTVGAPIPELAW---RRADGKPLNGTVLLENSKEGIVW 308
Query: 205 TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISL---NVIKVETAVAQPDP 256
+I L++ AV+ D+G Y C+A N AG ISL + K+E P P
Sbjct: 309 SI-----LSVPAVSYRDTGKYICKATNYAGSAEAVISLIINDAPKMENPTLDPKP 358
Score = 65 (27.9 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L+ +FR L +L EL L N + P L + LR L + N + + EA + + +
Sbjct: 98 LNSDSFRGLYSLEELRLDGNSLSSFPWESLMDMPSLRLLDIHNNQLSSLPSEAALYMKNI 157
Query: 138 NLEDFACSPNIRPITPDV 155
D + S N+ + +V
Sbjct: 158 TYLDLS-SNNLLTVPAEV 174
Score = 54 (24.1 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 69 QVLDLSDNFLDRYTFRKLI---NLVELDLSYNQIQFVPSHILDSILELR 114
++LD+ +N L + N+ LDLS N + VP+ +L++ L ++
Sbjct: 134 RLLDIHNNQLSSLPSEAALYMKNITYLDLSSNNLLTVPAEVLNTWLTIK 182
Score = 51 (23.0 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 265 TVVTIILTACFVVLCIILLKAKRKRYADVNRRYLED 300
TV +I V++C LK K K++ N + ++D
Sbjct: 551 TVACVIAVPLTVIVCCGALKRKIKKFLGKNSKDIQD 586
>UNIPROTKB|F1P2C4 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00823432 Ensembl:ENSGALT00000038578
ArrayExpress:F1P2C4 Uniprot:F1P2C4
Length = 423
Score = 127 (49.8 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 32/106 (30%), Positives = 54/106 (50%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRKLINLVE 91
CPS C C + K V+C KN +P+ + T++L+L +N + +F+ L +L
Sbjct: 24 CPSVCSCSNQFSK--VICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEI 81
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L LS N I+ + + + L L+L N + I + AF+ + KL
Sbjct: 82 LQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKL 127
Score = 98 (39.6 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 30/117 (25%), Positives = 50/117 (42%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+L F C +P I D+ E + CRA+ S + + WI +
Sbjct: 317 IGELDLNYFTCYAPVIVEPPADLNVTEGMAAEMKCRASTS-LTSVSWITPNGSV------ 369
Query: 193 LANMNKRQYIIK-TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVE 248
M Y ++ + S L VT+ D+G+YTC N G + +LNV ++
Sbjct: 370 ---MTHGAYRVRIAVLSDGTLNFTKVTVQDTGLYTCMVSNSVGNTTASATLNVTALD 423
Score = 89 (36.4 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + F L NL L+L N++ +P+ + +L+EL L NPI+
Sbjct: 80 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 139
Query: 126 ITHEAFINVPKLNLED 141
I AF +P L D
Sbjct: 140 IPSYAFNRIPSLRRLD 155
Score = 60 (26.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLN-LEDF 142
L+L NQIQ + + + L L+LS N I+ I AF + LN LE F
Sbjct: 58 LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 109
>RGD|1305567 [details] [associations]
symbol:Lrfn3 "leucine rich repeat and fibronectin type III
domain containing 3" species:10116 "Rattus norvegicus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
RGD:1305567 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 EMBL:CH473979 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:79414
eggNOG:NOG323197 KO:K16356 OMA:WAVGEEE OrthoDB:EOG43TZV6
EMBL:BC158862 IPI:IPI00367086 RefSeq:NP_001100972.1
UniGene:Rn.50030 ProteinModelPortal:B0BNK7
Ensembl:ENSRNOT00000028275 GeneID:308495 KEGG:rno:308495
UCSC:RGD:1305567 NextBio:659014 Genevestigator:B0BNK7
Uniprot:B0BNK7
Length = 626
Score = 117 (46.2 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 31/95 (32%), Positives = 43/95 (45%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYTFRKLIN---LVE 91
CP C C+ + +VLC +P LD L L+DNF+ R L N L+
Sbjct: 28 CPRRCRCQTQSLPLSVLCPGAGLLFVPPSLDRRAAELRLADNFIAAVRRRDLANMTGLLH 87
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
L LS N I+ V + + LR L L GN + +
Sbjct: 88 LSLSRNTIRHVAAGAFADLRALRALHLDGNRLTSL 122
Score = 113 (44.8 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 140 EDFACSPNI-RPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-KIIANISSGLANMN 197
E+F C P + +P + L CRA G P P+++W+ + +++ N S A N
Sbjct: 289 EEFVCEPPVVTHRSPPLAVPAGRPAALRCRAVGDPEPRVRWVSPQGRLLGNSSRARAFPN 348
Query: 198 KRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
L ++ D G +TC A N AGE + L V
Sbjct: 349 ------------GTLELLVTEPEDGGTFTCIAANAAGEATAAVELTV 383
Score = 69 (29.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 84 RKLINLVELDLSYNQIQFVPSHILDSILE-LRELKLSGNPIQKITHEAFINVPKLN 138
R L+NL L LS NQ+ + + LD E L +L LS N ++++ EA + +N
Sbjct: 128 RGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVN 183
Score = 56 (24.8 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 71 LDLSDNFLDRYTFR---KLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
LDLS N L++ + +L N+ L L +N + VP+ + +L L ++ N + I
Sbjct: 161 LDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIP 220
Query: 128 HEA-FINVPKL 137
+ F +P L
Sbjct: 221 PDPLFSRLPLL 231
>MGI|MGI:1917780 [details] [associations]
symbol:Lrfn2 "leucine rich repeat and fibronectin type III
domain containing 2" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:1917780
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 EMBL:CH466559 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:57497
eggNOG:NOG311542 KO:K16355 OMA:HWVAPDD OrthoDB:EOG469QT6
EMBL:AK017594 EMBL:AK044375 EMBL:AK122476 EMBL:BC139418
IPI:IPI00330152 RefSeq:NP_081728.2 UniGene:Mm.133607
ProteinModelPortal:Q80TG9 SMR:Q80TG9 IntAct:Q80TG9 STRING:Q80TG9
PhosphoSite:Q80TG9 PRIDE:Q80TG9 Ensembl:ENSMUST00000046254
GeneID:70530 KEGG:mmu:70530 UCSC:uc008cyd.2 InParanoid:Q80TG9
NextBio:331801 Bgee:Q80TG9 Genevestigator:Q80TG9
GermOnline:ENSMUSG00000040490 Uniprot:Q80TG9
Length = 788
Score = 122 (48.0 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 140 EDFACSPN-IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNK 198
E+F C P I T + E + TL C+A G P P I W+ + + SS A
Sbjct: 282 EEFVCEPPLITQHTHKLLVLEGQAATLKCKAIGDPSPLIHWVAPDDRLVGNSSRTA---- 337
Query: 199 RQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKV 247
+ L I+ T DSG +TC A N AGE + ++++++
Sbjct: 338 -------VYDNGTLDILITTSQDSGPFTCIAANAAGEATATVEVSIVQL 379
Score = 110 (43.8 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 34/117 (29%), Positives = 50/117 (42%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFL---DRYTFRKLINLVE 91
CP C C+ LC +K +P +D T L L NF+ R F + LV+
Sbjct: 21 CPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLGGNFIIHIGRQDFANMTGLVD 80
Query: 92 LDLSYNQIQFV-PSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPN 147
L LS N I + P LD + LR L L N + + + + +NL+ + N
Sbjct: 81 LTLSRNTISHIQPFSFLD-LESLRSLHLDSNRLPSLGEDTLRGL--VNLQHLIVNNN 134
Score = 83 (34.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 86 LINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACS 145
L+ L +LDLSYN + +P + ++ L +L L N + I F ++ KL D S
Sbjct: 148 LLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQKLARLDLT-S 206
Query: 146 PNIRPITPD 154
++ + PD
Sbjct: 207 NRLQKLPPD 215
Score = 68 (29.0 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 71 LDLSDNFLDRYTF---RKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
LDLS N L + R+++NL +L L +N + + + +L L L+ N +QK+
Sbjct: 154 LDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQKLARLDLTSNRLQKL 212
Score = 60 (26.2 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 71 LDLSDNFLDR---YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
L LS N + ++F L +L L L N++ + L ++ L+ L ++ N + I
Sbjct: 81 LTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLGGIA 140
Query: 128 HEAFINVPKLNLEDFACSPN 147
+AF + L LED S N
Sbjct: 141 DDAFEDF-LLTLEDLDLSYN 159
Score = 56 (24.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 66 VGTQVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVP 103
V L L N LD TF L L LDL+ N++Q +P
Sbjct: 173 VNLHQLSLDHNLLDHIAEGTFADLQKLARLDLTSNRLQKLP 213
>RGD|1311831 [details] [associations]
symbol:Lrfn2 "leucine rich repeat and fibronectin type III
domain containing 2" species:10116 "Rattus norvegicus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 RGD:1311831 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 HOGENOM:HOG000237343 HOVERGEN:HBG052352
eggNOG:NOG311542 OrthoDB:EOG469QT6 EMBL:DQ070869 IPI:IPI00371727
UniGene:Rn.47365 ProteinModelPortal:Q460M5 IntAct:Q460M5
STRING:Q460M5 UCSC:RGD:1311831 InParanoid:Q460M5
Genevestigator:Q460M5 Uniprot:Q460M5
Length = 788
Score = 122 (48.0 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 140 EDFACSPN-IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNK 198
E+F C P I T + E + TL C+A G P P I W+ + + SS A
Sbjct: 282 EEFVCEPPLITQHTHKLLVLEGQAATLKCKAIGDPSPLIHWVAPDDRLVGNSSRTA---- 337
Query: 199 RQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKV 247
+ L I+ T DSG +TC A N AGE + ++++++
Sbjct: 338 -------VYDNGTLDILITTSQDSGPFTCIAANAAGEATATVEVSIVQL 379
Score = 110 (43.8 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 34/117 (29%), Positives = 50/117 (42%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFL---DRYTFRKLINLVE 91
CP C C+ LC +K +P +D T L L NF+ R F + LV+
Sbjct: 21 CPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLGGNFIIHIGRQDFANMTGLVD 80
Query: 92 LDLSYNQIQFV-PSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPN 147
L LS N I + P LD + LR L L N + + + + +NL+ + N
Sbjct: 81 LTLSRNTISHIQPFSFLD-LESLRSLHLDSNRLPSLGEDTLRGL--VNLQHLIVNNN 134
Score = 83 (34.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 86 LINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACS 145
L+ L +LDLSYN + +P + ++ L +L L N + I F ++ KL D S
Sbjct: 148 LLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQKLARLDLT-S 206
Query: 146 PNIRPITPD 154
++ + PD
Sbjct: 207 NRLQKLPPD 215
Score = 68 (29.0 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 71 LDLSDNFLDRYTF---RKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
LDLS N L + R+++NL +L L +N + + + +L L L+ N +QK+
Sbjct: 154 LDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQKLARLDLTSNRLQKL 212
Score = 60 (26.2 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 71 LDLSDNFLDR---YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
L LS N + ++F L +L L L N++ + L ++ L+ L ++ N + I
Sbjct: 81 LTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLGGIA 140
Query: 128 HEAFINVPKLNLEDFACSPN 147
+AF + L LED S N
Sbjct: 141 DDAFEDF-LLTLEDLDLSYN 159
Score = 56 (24.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 66 VGTQVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVP 103
V L L N LD TF L L LDL+ N++Q +P
Sbjct: 173 VNLHQLSLDHNLLDHIAEGTFADLQKLARLDLTSNRLQKLP 213
>UNIPROTKB|Q9ULH4 [details] [associations]
symbol:LRFN2 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:CH471081 GO:GO:0030054 GO:GO:0045211
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HOGENOM:HOG000237343 HOVERGEN:HBG052352 EMBL:AB033072 EMBL:AK291474
EMBL:AL591063 EMBL:BC142616 IPI:IPI00008107 RefSeq:NP_065788.1
UniGene:Hs.250015 ProteinModelPortal:Q9ULH4 SMR:Q9ULH4
STRING:Q9ULH4 PhosphoSite:Q9ULH4 DMDM:62286951 PaxDb:Q9ULH4
PRIDE:Q9ULH4 Ensembl:ENST00000338305 GeneID:57497 KEGG:hsa:57497
UCSC:uc003oph.1 CTD:57497 GeneCards:GC06M040406 HGNC:HGNC:21226
HPA:HPA013653 MIM:612808 neXtProt:NX_Q9ULH4 PharmGKB:PA134913285
eggNOG:NOG311542 InParanoid:Q9ULH4 KO:K16355 OMA:HWVAPDD
OrthoDB:EOG469QT6 ChiTaRS:LRFN2 GenomeRNAi:57497 NextBio:63812
Bgee:Q9ULH4 CleanEx:HS_LRFN2 Genevestigator:Q9ULH4
GermOnline:ENSG00000156564 Uniprot:Q9ULH4
Length = 789
Score = 120 (47.3 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 32/109 (29%), Positives = 48/109 (44%)
Query: 140 EDFACSPN-IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNK 198
E+F C P I T + E + TL C+A G P P I W+ + + SS A
Sbjct: 282 EEFVCEPPLITQHTHKLLVLEGQAATLKCKAIGDPSPLIHWVAPDDRLVGNSSRTA---- 337
Query: 199 RQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKV 247
+ L I T DSG +TC A N AGE + ++++++
Sbjct: 338 -------VYDNGTLDIFITTSQDSGAFTCIAANAAGEATAMVEVSIVQL 379
Score = 111 (44.1 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 34/117 (29%), Positives = 50/117 (42%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFL---DRYTFRKLINLVE 91
CP C C+ LC +K +P +D T L L NF+ R F + LV+
Sbjct: 21 CPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLGGNFIIHISRQDFANMTGLVD 80
Query: 92 LDLSYNQIQFV-PSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPN 147
L LS N I + P LD + LR L L N + + + + +NL+ + N
Sbjct: 81 LTLSRNTISHIQPFSFLD-LESLRSLHLDSNRLPSLGEDTLRGL--VNLQHLIVNNN 134
Score = 68 (29.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 71 LDLSDNFLDRYTF---RKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
LDLS N L + R+++NL +L L +N + + + +L L L+ N +QK+
Sbjct: 154 LDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQKLARLDLTSNRLQKL 212
Score = 63 (27.2 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 71 LDLSDNFLDR---YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
L LS N + ++F L +L L L N++ + L ++ L+ L ++ N + I
Sbjct: 81 LTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLGGIA 140
Query: 128 HEAFINVPKLNLEDFACSPN 147
EAF + L LED S N
Sbjct: 141 DEAFEDF-LLTLEDLDLSYN 159
Score = 56 (24.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 66 VGTQVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVP 103
V L L N LD TF L L LDL+ N++Q +P
Sbjct: 173 VNLHQLSLDHNLLDHIAEGTFADLQKLARLDLTSNRLQKLP 213
>UNIPROTKB|Q96NI6 [details] [associations]
symbol:LRFN5 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 EMBL:AK055365 EMBL:AK096627 EMBL:AL138498
EMBL:BC043165 IPI:IPI00396961 RefSeq:NP_689660.2 UniGene:Hs.136893
ProteinModelPortal:Q96NI6 SMR:Q96NI6 STRING:Q96NI6
PhosphoSite:Q96NI6 DMDM:116242620 PaxDb:Q96NI6 PRIDE:Q96NI6
DNASU:145581 Ensembl:ENST00000298119 GeneID:145581 KEGG:hsa:145581
UCSC:uc001wvm.3 CTD:145581 GeneCards:GC14P042076 HGNC:HGNC:20360
HPA:HPA001177 MIM:612811 neXtProt:NX_Q96NI6 PharmGKB:PA134888453
eggNOG:NOG249839 InParanoid:Q96NI6 KO:K16358 OMA:NAQCCKA
OrthoDB:EOG4X6C81 PhylomeDB:Q96NI6 GenomeRNAi:145581 NextBio:85141
ArrayExpress:Q96NI6 Bgee:Q96NI6 CleanEx:HS_LRFN5
Genevestigator:Q96NI6 GermOnline:ENSG00000165379 InterPro:IPR026879
PANTHER:PTHR24373:SF3 Uniprot:Q96NI6
Length = 719
Score = 156 (60.0 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 36/107 (33%), Positives = 52/107 (48%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF---LDRYTFRKLINLVE 91
CP C C+ LC K +P +D T L L+DNF + R F + +LV+
Sbjct: 20 CPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFVTNIKRKDFANMTSLVD 79
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLN 138
L LS N I F+ H + LR L L+ N + KIT++ F + L+
Sbjct: 80 LTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLH 126
Score = 149 (57.5 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 46/150 (30%), Positives = 71/150 (47%)
Query: 115 ELKLSGNPIQKITHEAFINVPKLNLEDFACSPN-IRPITPDVTAEENENVTLSCRATGSP 173
+L+ +P +T F ++P+ E+F C P I T ++ E + TL C+A G P
Sbjct: 259 DLETCASP-PLLTGRYFWSIPE---EEFLCEPPLITRHTHEMRVLEGQRATLRCKARGDP 314
Query: 174 VPKIKWIFKE-KIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232
P I WI E K+I+N + L N L I+ T+ D+G +TC A N
Sbjct: 315 EPAIHWISPEGKLISNATRSLVYDN------------GTLDILITTVKDTGAFTCIASNP 362
Query: 233 AGEVFTNISLNVIKVE------TAVAQPDP 256
AGE + L++IK+ + +PDP
Sbjct: 363 AGEATQIVDLHIIKLPHLLNSTNHIHEPDP 392
Score = 78 (32.5 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 69 QVLDLSDNFLDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
+ L L+ N L + T F L NL L L+ NQ+ + S D + L EL LS N ++
Sbjct: 102 RALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLET 161
Query: 126 ITHEA 130
I +A
Sbjct: 162 IPWDA 166
Score = 56 (24.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 56 NFTTIP----EQLDVGTQVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVP 103
N TIP E++ V L L N +D TF L + LD++ N++Q +P
Sbjct: 158 NLETIPWDAVEKM-VSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLP 211
>UNIPROTKB|E2REC5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:AAEX03011364 RefSeq:XP_540535.1
ProteinModelPortal:E2REC5 Ensembl:ENSCAFT00000010899 GeneID:483417
KEGG:cfa:483417 NextBio:20857811 Uniprot:E2REC5
Length = 639
Score = 133 (51.9 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 35/121 (28%), Positives = 61/121 (50%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN--- 76
+ +LV G ++ CPS C C + K V+C KN +P+ + T++L+L +N
Sbjct: 33 LQLLVVAGLVRA-QTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQ 89
Query: 77 FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
+ +F+ L +L L LS N I+ + + + L L+L N + I + AF+ + K
Sbjct: 90 IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK 149
Query: 137 L 137
L
Sbjct: 150 L 150
Score = 94 (38.1 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 31/118 (26%), Positives = 48/118 (40%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CRA+ S + + WI +
Sbjct: 341 IGELDQNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTS-LTSVSWITPNGTV------ 393
Query: 193 LANMNKRQYIIK-TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVET 249
M Y ++ + S L VT+ D+G+YTC N G + +LNV T
Sbjct: 394 ---MTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTAATT 448
Score = 89 (36.4 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + F L NL L+L N++ +P+ + +L+EL L NPI+
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 126 ITHEAFINVPKLNLED 141
I AF +P L D
Sbjct: 163 IPSYAFNRIPSLRRLD 178
Score = 78 (32.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 71 LDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
LDLS N L +F+ L++L +L + +QIQ + + D++ L E+ L+ N + +
Sbjct: 224 LDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLP 283
Query: 128 HEAFINVPKLNLE 140
H+ F P +LE
Sbjct: 284 HDLF--TPLHHLE 294
Score = 71 (30.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 57 FTTIPE--QLDVGTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELR 114
F IP +LD+G ++ LS ++ F L NL L+L+ ++ +P+ L +++L
Sbjct: 168 FNRIPSLRRLDLG-ELKRLS--YISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLD 222
Query: 115 ELKLSGNPIQKITHEAF 131
EL LSGN + I +F
Sbjct: 223 ELDLSGNHLSAIRPGSF 239
Score = 67 (28.6 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 86 LINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
LI L ELDLS N + + ++ L++L + + IQ I AF N+ L
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 269
Score = 37 (18.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 151 ITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-KII 186
+TP T + T+ S +P I + K KII
Sbjct: 493 LTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKII 529
>UNIPROTKB|Q9HCJ2 [details] [associations]
symbol:LRRC4C "Leucine-rich repeat-containing protein 4C"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0050770
"regulation of axonogenesis" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:CH471064 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AB046800 EMBL:AY358293 EMBL:AK289646
EMBL:BC041374 IPI:IPI00014223 RefSeq:NP_001245348.1
RefSeq:NP_065980.1 UniGene:Hs.741547 PDB:3ZYJ PDBsum:3ZYJ
ProteinModelPortal:Q9HCJ2 SMR:Q9HCJ2 IntAct:Q9HCJ2 STRING:Q9HCJ2
PhosphoSite:Q9HCJ2 DMDM:57012973 PRIDE:Q9HCJ2
Ensembl:ENST00000278198 Ensembl:ENST00000527150
Ensembl:ENST00000528697 Ensembl:ENST00000530763 GeneID:57689
KEGG:hsa:57689 UCSC:uc001mxa.1 CTD:57689 GeneCards:GC11M040135
HGNC:HGNC:29317 MIM:608817 neXtProt:NX_Q9HCJ2 PharmGKB:PA142671534
InParanoid:Q9HCJ2 KO:K07523 OMA:WITPNGS OrthoDB:EOG4XKV6K
PhylomeDB:Q9HCJ2 GenomeRNAi:57689 NextBio:64523 ArrayExpress:Q9HCJ2
Bgee:Q9HCJ2 CleanEx:HS_LRRC4C Genevestigator:Q9HCJ2
GermOnline:ENSG00000148948 PANTHER:PTHR24369:SF8 Uniprot:Q9HCJ2
Length = 640
Score = 133 (51.9 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 35/121 (28%), Positives = 61/121 (50%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN--- 76
+ +LV G ++ CPS C C + K V+C KN +P+ + T++L+L +N
Sbjct: 33 LQLLVVAGLVRA-QTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQ 89
Query: 77 FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
+ +F+ L +L L LS N I+ + + + L L+L N + I + AF+ + K
Sbjct: 90 IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK 149
Query: 137 L 137
L
Sbjct: 150 L 150
Score = 94 (38.1 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 31/118 (26%), Positives = 48/118 (40%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CRA+ S + + WI +
Sbjct: 341 IGELDQNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTS-LTSVSWITPNGTV------ 393
Query: 193 LANMNKRQYIIK-TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVET 249
M Y ++ + S L VT+ D+G+YTC N G + +LNV T
Sbjct: 394 ---MTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTAATT 448
Score = 89 (36.4 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + F L NL L+L N++ +P+ + +L+EL L NPI+
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 126 ITHEAFINVPKLNLED 141
I AF +P L D
Sbjct: 163 IPSYAFNRIPSLRRLD 178
Score = 78 (32.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 71 LDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
LDLS N L +F+ L++L +L + +QIQ + + D++ L E+ L+ N + +
Sbjct: 224 LDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLP 283
Query: 128 HEAFINVPKLNLE 140
H+ F P +LE
Sbjct: 284 HDLF--TPLHHLE 294
Score = 71 (30.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 57 FTTIPE--QLDVGTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELR 114
F IP +LD+G ++ LS ++ F L NL L+L+ ++ +P+ L +++L
Sbjct: 168 FNRIPSLRRLDLG-ELKRLS--YISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLD 222
Query: 115 ELKLSGNPIQKITHEAF 131
EL LSGN + I +F
Sbjct: 223 ELDLSGNHLSAIRPGSF 239
Score = 67 (28.6 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 86 LINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
LI L ELDLS N + + ++ L++L + + IQ I AF N+ L
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 269
Score = 38 (18.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 14/55 (25%), Positives = 22/55 (40%)
Query: 133 NVPKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-KII 186
NV + D+ + +TP T + T+ S +P I + K KII
Sbjct: 475 NVGPTPVVDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKII 529
>UNIPROTKB|F1MXH5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:DAAA02041416 IPI:IPI00693604
RefSeq:XP_002693573.1 RefSeq:XP_003583216.1 RefSeq:XP_003583217.1
RefSeq:XP_003583218.1 RefSeq:XP_003587053.1 RefSeq:XP_003587054.1
RefSeq:XP_003587055.1 RefSeq:XP_883783.1 PRIDE:F1MXH5
Ensembl:ENSBTAT00000009633 GeneID:528664 KEGG:bta:528664
NextBio:20874880 Uniprot:F1MXH5
Length = 640
Score = 133 (51.9 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 35/121 (28%), Positives = 61/121 (50%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN--- 76
+ +LV G ++ CPS C C + K V+C KN +P+ + T++L+L +N
Sbjct: 33 LQLLVVAGLVRA-QTCPSVCSCSNQFSK--VICVRKNLRDVPDGISTNTRLLNLHENQIQ 89
Query: 77 FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
+ +F+ L +L L LS N I+ + + + L L+L N + I + AF+ + K
Sbjct: 90 IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK 149
Query: 137 L 137
L
Sbjct: 150 L 150
Score = 94 (38.1 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 31/118 (26%), Positives = 48/118 (40%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CRA+ S + + WI +
Sbjct: 341 IGELDQNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTS-LTSVSWITPNGTV------ 393
Query: 193 LANMNKRQYIIK-TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVET 249
M Y ++ + S L VT+ D+G+YTC N G + +LNV T
Sbjct: 394 ---MTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTAATT 448
Score = 89 (36.4 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + F L NL L+L N++ +P+ + +L+EL L NPI+
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 126 ITHEAFINVPKLNLED 141
I AF +P L D
Sbjct: 163 IPSYAFNRIPSLRRLD 178
Score = 78 (32.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 71 LDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
LDLS N L +F+ L++L +L + +QIQ + + D++ L E+ L+ N + +
Sbjct: 224 LDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLP 283
Query: 128 HEAFINVPKLNLE 140
H+ F P +LE
Sbjct: 284 HDLF--TPLHHLE 294
Score = 71 (30.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 57 FTTIPE--QLDVGTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELR 114
F IP +LD+G ++ LS ++ F L NL L+L+ ++ +P+ L +++L
Sbjct: 168 FNRIPSLRRLDLG-ELKRLS--YISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLD 222
Query: 115 ELKLSGNPIQKITHEAF 131
EL LSGN + I +F
Sbjct: 223 ELDLSGNHLSAIRPGSF 239
Score = 67 (28.6 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 86 LINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
LI L ELDLS N + + ++ L++L + + IQ I AF N+ L
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 269
Score = 37 (18.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 151 ITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-KII 186
+TP T + T+ S +P I + K KII
Sbjct: 493 LTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKII 529
>MGI|MGI:2442636 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0016020 "membrane" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050770 "regulation of
axonogenesis" evidence=ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2442636 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 EMBL:AK032467 EMBL:AK034276
EMBL:AK048322 EMBL:BC094588 IPI:IPI00309419 RefSeq:NP_848840.3
UniGene:Mm.241682 ProteinModelPortal:Q8C031 SMR:Q8C031
DIP:DIP-42049N MINT:MINT-1895606 STRING:Q8C031 PhosphoSite:Q8C031
PRIDE:Q8C031 Ensembl:ENSMUST00000059049 Ensembl:ENSMUST00000135431
Ensembl:ENSMUST00000162807 GeneID:241568 KEGG:mmu:241568
UCSC:uc008lhc.1 InParanoid:Q505E5 ChiTaRS:LRRC4C NextBio:385057
Bgee:Q8C031 CleanEx:MM_LRRC4C Genevestigator:Q8C031
GermOnline:ENSMUSG00000050587 Uniprot:Q8C031
Length = 640
Score = 133 (51.9 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 35/121 (28%), Positives = 61/121 (50%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN--- 76
+ +LV G ++ CPS C C + K V+C KN +P+ + T++L+L +N
Sbjct: 33 LQLLVVAGLVRA-QTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQ 89
Query: 77 FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
+ +F+ L +L L LS N I+ + + + L L+L N + I + AF+ + K
Sbjct: 90 IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK 149
Query: 137 L 137
L
Sbjct: 150 L 150
Score = 94 (38.1 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 31/118 (26%), Positives = 48/118 (40%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CRA+ S + + WI +
Sbjct: 341 IGELDQNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTS-LTSVSWITPNGTV------ 393
Query: 193 LANMNKRQYIIK-TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVET 249
M Y ++ + S L VT+ D+G+YTC N G + +LNV T
Sbjct: 394 ---MTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTAATT 448
Score = 89 (36.4 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + F L NL L+L N++ +P+ + +L+EL L NPI+
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 126 ITHEAFINVPKLNLED 141
I AF +P L D
Sbjct: 163 IPSYAFNRIPSLRRLD 178
Score = 78 (32.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 71 LDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
LDLS N L +F+ L++L +L + +QIQ + + D++ L E+ L+ N + +
Sbjct: 224 LDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLP 283
Query: 128 HEAFINVPKLNLE 140
H+ F P +LE
Sbjct: 284 HDLF--TPLHHLE 294
Score = 71 (30.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 57 FTTIPE--QLDVGTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELR 114
F IP +LD+G ++ LS ++ F L NL L+L+ ++ +P+ L +++L
Sbjct: 168 FNRIPSLRRLDLG-ELKRLS--YISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLD 222
Query: 115 ELKLSGNPIQKITHEAF 131
EL LSGN + I +F
Sbjct: 223 ELDLSGNHLSAIRPGSF 239
Score = 67 (28.6 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 86 LINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
LI L ELDLS N + + ++ L++L + + IQ I AF N+ L
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 269
Score = 37 (18.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 151 ITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-KII 186
+TP T + T+ S +P I + K KII
Sbjct: 493 LTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKII 529
>RGD|1311013 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA;ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 RGD:1311013
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:CH473949 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 IPI:IPI00207958
RefSeq:NP_001101223.1 UniGene:Rn.219303 SMR:D3ZXT1
Ensembl:ENSRNOT00000044595 GeneID:311236 KEGG:rno:311236
UCSC:RGD:1311013 NextBio:663237 Uniprot:D3ZXT1
Length = 640
Score = 133 (51.9 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 35/121 (28%), Positives = 61/121 (50%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN--- 76
+ +LV G ++ CPS C C + K V+C KN +P+ + T++L+L +N
Sbjct: 33 LQLLVVAGLVRA-QTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQ 89
Query: 77 FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
+ +F+ L +L L LS N I+ + + + L L+L N + I + AF+ + K
Sbjct: 90 IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK 149
Query: 137 L 137
L
Sbjct: 150 L 150
Score = 94 (38.1 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 31/118 (26%), Positives = 48/118 (40%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CRA+ S + + WI +
Sbjct: 341 IGELDQNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTS-LTSVSWITPNGTV------ 393
Query: 193 LANMNKRQYIIK-TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVET 249
M Y ++ + S L VT+ D+G+YTC N G + +LNV T
Sbjct: 394 ---MTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTAATT 448
Score = 89 (36.4 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + F L NL L+L N++ +P+ + +L+EL L NPI+
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 126 ITHEAFINVPKLNLED 141
I AF +P L D
Sbjct: 163 IPSYAFNRIPSLRRLD 178
Score = 78 (32.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 71 LDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
LDLS N L +F+ L++L +L + +QIQ + + D++ L E+ L+ N + +
Sbjct: 224 LDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLP 283
Query: 128 HEAFINVPKLNLE 140
H+ F P +LE
Sbjct: 284 HDLF--TPLHHLE 294
Score = 71 (30.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 57 FTTIPE--QLDVGTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELR 114
F IP +LD+G ++ LS ++ F L NL L+L+ ++ +P+ L +++L
Sbjct: 168 FNRIPSLRRLDLG-ELKRLS--YISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLD 222
Query: 115 ELKLSGNPIQKITHEAF 131
EL LSGN + I +F
Sbjct: 223 ELDLSGNHLSAIRPGSF 239
Score = 67 (28.6 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 86 LINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
LI L ELDLS N + + ++ L++L + + IQ I AF N+ L
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 269
Score = 37 (18.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 151 ITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-KII 186
+TP T + T+ S +P I + K KII
Sbjct: 493 LTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKII 529
>UNIPROTKB|F1SHH6 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:CU607014 RefSeq:XP_003122907.1
ProteinModelPortal:F1SHH6 Ensembl:ENSSSCT00000014510
GeneID:100522726 KEGG:ssc:100522726 Uniprot:F1SHH6
Length = 640
Score = 133 (51.9 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 35/121 (28%), Positives = 61/121 (50%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN--- 76
+ +LV G ++ CPS C C + K V+C KN +P+ + T++L+L +N
Sbjct: 33 LQLLVVAGLVRA-QTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQ 89
Query: 77 FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
+ +F+ L +L L LS N I+ + + + L L+L N + I + AF+ + K
Sbjct: 90 IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK 149
Query: 137 L 137
L
Sbjct: 150 L 150
Score = 94 (38.1 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 31/118 (26%), Positives = 48/118 (40%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CRA+ S + + WI +
Sbjct: 341 IGELDQNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTS-LTSVSWITPNGTV------ 393
Query: 193 LANMNKRQYIIK-TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVET 249
M Y ++ + S L VT+ D+G+YTC N G + +LNV T
Sbjct: 394 ---MTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTAATT 448
Score = 89 (36.4 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + F L NL L+L N++ +P+ + +L+EL L NPI+
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 126 ITHEAFINVPKLNLED 141
I AF +P L D
Sbjct: 163 IPSYAFNRIPSLRRLD 178
Score = 79 (32.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 56 NFTTIPEQLD-VGTQVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSIL 111
N IP V LDLS N L +F+ L++L +L + +QIQ + + D++
Sbjct: 208 NLREIPNLTPLVKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 267
Query: 112 ELRELKLSGNPIQKITHEAFINVPKLNLE 140
L E+ L+ N + + H+ F P +LE
Sbjct: 268 SLVEINLAHNNLTLLPHDLF--TPLHHLE 294
Score = 37 (18.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 151 ITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-KII 186
+TP T + T+ S +P I + K KII
Sbjct: 493 LTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKII 529
>UNIPROTKB|Q9P244 [details] [associations]
symbol:LRFN1 "Leucine-rich repeat and fibronectin type III
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 HSSP:P56276
MEROPS:I43.001 EMBL:AC011445 EMBL:AB040917 EMBL:BC025310
IPI:IPI00793456 RefSeq:NP_065913.1 UniGene:Hs.97860
ProteinModelPortal:Q9P244 SMR:Q9P244 IntAct:Q9P244 STRING:Q9P244
PhosphoSite:Q9P244 DMDM:189028858 PaxDb:Q9P244 PRIDE:Q9P244
Ensembl:ENST00000248668 GeneID:57622 KEGG:hsa:57622 UCSC:uc002okw.2
CTD:57622 GeneCards:GC19M039798 H-InvDB:HIX0015112 HGNC:HGNC:29290
HPA:HPA017383 MIM:612807 neXtProt:NX_Q9P244 PharmGKB:PA134871732
eggNOG:NOG291271 HOGENOM:HOG000237343 HOVERGEN:HBG052352
InParanoid:Q9P244 KO:K16354 OMA:PRVSHVC OrthoDB:EOG4TMR1K
GenomeRNAi:57622 NextBio:64302 Bgee:Q9P244 CleanEx:HS_LRFN1
Genevestigator:Q9P244 Uniprot:Q9P244
Length = 771
Score = 126 (49.4 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 36/142 (25%), Positives = 62/142 (43%)
Query: 115 ELKLSGNPIQKITHEAFINVPKLNLEDFACSPNI--RPITPDVTAEENENVTLSCRATGS 172
+L+ P + +T F ++P+ E+F C P + R E + V+L CRA G
Sbjct: 271 DLETCATP-EHLTDRYFWSIPE---EEFLCEPPLITRQAGGRALVVEGQAVSLRCRAVGD 326
Query: 173 PVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232
P P + W+ + + L N ++ + + L + T+ DSG +TC A N
Sbjct: 327 PEPVVHWVAPDGRL------LGNSSRTR-----VRGDGTLDVTITTLRDSGTFTCIASNA 375
Query: 233 AGEVFTNISLNVIKVETAVAQP 254
AGE + + V+ + P
Sbjct: 376 AGEATAPVEVCVVPLPLMAPPP 397
Score = 103 (41.3 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 29/95 (30%), Positives = 42/95 (44%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVE 91
CP C C+ T+LC +P +D L L+DNF+ R F + +LV
Sbjct: 34 CPGRCICQNVAPTLTMLCAKTGLLFVPPAIDRRVVELRLTDNFIAAVRRRDFANMTSLVH 93
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
L LS N I V + + LR L L N + ++
Sbjct: 94 LTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEV 128
Score = 52 (23.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 66 VGTQVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVP 103
V L L N +D TF +L LV LD++ N++ +P
Sbjct: 186 VNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLP 226
>RGD|1304707 [details] [associations]
symbol:Lrfn1 "leucine rich repeat and fibronectin type III
domain containing 1" species:10116 "Rattus norvegicus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 RGD:1304707 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 CTD:57622
eggNOG:NOG291271 HOGENOM:HOG000237343 HOVERGEN:HBG052352 KO:K16354
OMA:PRVSHVC OrthoDB:EOG4TMR1K GeneTree:ENSGT00660000095307
EMBL:AABR03001365 IPI:IPI00360897 RefSeq:NP_001121166.1
UniGene:Rn.87338 ProteinModelPortal:P0C7J6
Ensembl:ENSRNOT00000057073 GeneID:365222 KEGG:rno:365222
UCSC:RGD:1304707 NextBio:686907 ArrayExpress:P0C7J6
Genevestigator:P0C7J6 Uniprot:P0C7J6
Length = 766
Score = 126 (49.4 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 36/142 (25%), Positives = 62/142 (43%)
Query: 115 ELKLSGNPIQKITHEAFINVPKLNLEDFACSPNI--RPITPDVTAEENENVTLSCRATGS 172
+L+ P + +T F ++P+ E+F C P + R E + V+L CRA G
Sbjct: 271 DLETCATP-EHLTDRYFWSIPE---EEFLCEPPLITRQAGGRALVVEGQAVSLRCRAVGD 326
Query: 173 PVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232
P P + W+ + + L N ++ + + L + T+ DSG +TC A N
Sbjct: 327 PEPVVHWVAPDGRL------LGNSSRTR-----VRGDGTLDVTITTLRDSGTFTCIASNA 375
Query: 233 AGEVFTNISLNVIKVETAVAQP 254
AGE + + V+ + P
Sbjct: 376 AGEATAPVEVCVVPLPLMAPPP 397
Score = 103 (41.3 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 29/95 (30%), Positives = 42/95 (44%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVE 91
CP C C+ T+LC +P +D L L+DNF+ R F + +LV
Sbjct: 34 CPGRCICQNVAPTLTMLCAKTGLLFVPPAIDRRVVELRLTDNFIAAVRRRDFANMTSLVH 93
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
L LS N I V + + LR L L N + ++
Sbjct: 94 LTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEV 128
Score = 52 (23.4 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 66 VGTQVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVP 103
V L L N +D TF +L LV LD++ N++ +P
Sbjct: 186 VNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLP 226
Score = 38 (18.4 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 264 TTVVTI--ILTACFVVLCIILLKAKRKRYADVNRRYLEDKCES 304
T ++ I ++ A +V I+LL + K Y D + R ++ S
Sbjct: 535 TMIIAIGGVIVASVLVF-IVLLMIRYKVYGDGDSRRIKGTSRS 576
>UNIPROTKB|Q6UY18 [details] [associations]
symbol:LINGO4 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:AL589765
HSSP:Q9BZR6 HOGENOM:HOG000246971 HOVERGEN:HBG057546 EMBL:AY358115
IPI:IPI00258050 RefSeq:NP_001004432.1 UniGene:Hs.591477
ProteinModelPortal:Q6UY18 SMR:Q6UY18 STRING:Q6UY18
PhosphoSite:Q6UY18 DMDM:74762377 PRIDE:Q6UY18
Ensembl:ENST00000368820 GeneID:339398 KEGG:hsa:339398
UCSC:uc001ezf.1 CTD:339398 GeneCards:GC01M151775 HGNC:HGNC:31814
MIM:609794 neXtProt:NX_Q6UY18 PharmGKB:PA162394098 eggNOG:NOG306417
InParanoid:Q6UY18 OMA:EPPNGTL OrthoDB:EOG49KFQ7 GenomeRNAi:339398
NextBio:97381 Bgee:Q6UY18 CleanEx:HS_LINGO4 Genevestigator:Q6UY18
Uniprot:Q6UY18
Length = 593
Score = 131 (51.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 35/110 (31%), Positives = 54/110 (49%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFL---DRYTFRKLINLVE 91
CP+ C+C + + VLC + +P L + T++LDLS N L + +L L E
Sbjct: 31 CPAVCDCTSQ--PQAVLCGHRQLEAVPGGLPLDTELLDLSGNRLWGLQQGMLSRLSLLQE 88
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLED 141
LDLSYNQ+ + + L L+L GN ++ + F + L L D
Sbjct: 89 LDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLD 138
Score = 93 (37.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 32/109 (29%), Positives = 43/109 (39%)
Query: 142 FACSPN-IRPITPD-VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKR 199
F C P IR P V AEE + SC G P P + W+ + L +
Sbjct: 408 FTCKPALIRKSGPRWVIAEEGGHAVFSCSGDGDPAPTVSWMRPH------GAWLGRAGR- 460
Query: 200 QYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVE 248
++ + L I +V + D G Y C N AG L VI+VE
Sbjct: 461 ---VRVLED-GTLEIRSVQLRDRGAYVCVVSNVAGNDSLRTWLEVIQVE 505
>MGI|MGI:2136810 [details] [associations]
symbol:Lrfn1 "leucine rich repeat and fibronectin type III
domain containing 1" species:10090 "Mus musculus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 MGI:MGI:2136810 GO:GO:0016021 GO:GO:0005886
GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HSSP:P21809 MEROPS:I43.001
CTD:57622 eggNOG:NOG291271 HOGENOM:HOG000237343 HOVERGEN:HBG052352
KO:K16354 OMA:PRVSHVC OrthoDB:EOG4TMR1K EMBL:AB243740 EMBL:DQ070870
EMBL:DQ314497 EMBL:AK090175 EMBL:BC004018 IPI:IPI00468602
IPI:IPI00855061 IPI:IPI00895406 RefSeq:NP_001135393.1
RefSeq:NP_085039.2 UniGene:Mm.483073 ProteinModelPortal:Q2WF71
SMR:Q2WF71 IntAct:Q2WF71 STRING:Q2WF71 PhosphoSite:Q2WF71
PaxDb:Q2WF71 PRIDE:Q2WF71 Ensembl:ENSMUST00000055110
Ensembl:ENSMUST00000108288 GeneID:80749 KEGG:mmu:80749
UCSC:uc009fza.1 UCSC:uc009fzb.2 UCSC:uc009fzc.2
GeneTree:ENSGT00660000095307 InParanoid:Q2WF71 NextBio:350107
Bgee:Q2WF71 Genevestigator:Q2WF71 Uniprot:Q2WF71
Length = 766
Score = 126 (49.4 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 36/142 (25%), Positives = 62/142 (43%)
Query: 115 ELKLSGNPIQKITHEAFINVPKLNLEDFACSPNI--RPITPDVTAEENENVTLSCRATGS 172
+L+ P + +T F ++P+ E+F C P + R E + V+L CRA G
Sbjct: 271 DLETCATP-EHLTDRYFWSIPE---EEFLCEPPLITRQAGGRALVVEGQAVSLRCRAVGD 326
Query: 173 PVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNG 232
P P + W+ + + L N ++ + + L + T+ DSG +TC A N
Sbjct: 327 PEPVVHWVAPDGRL------LGNSSRTR-----VRGDGTLDVTITTLRDSGTFTCIASNA 375
Query: 233 AGEVFTNISLNVIKVETAVAQP 254
AGE + + V+ + P
Sbjct: 376 AGEATAPVEVCVVPLPLMAPPP 397
Score = 103 (41.3 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 29/95 (30%), Positives = 42/95 (44%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD---RYTFRKLINLVE 91
CP C C+ T+LC +P +D L L+DNF+ R F + +LV
Sbjct: 34 CPGRCICQNVAPTLTMLCAKTGLLFVPPAIDRRVVELRLTDNFIAAVRRRDFANMTSLVH 93
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
L LS N I V + + LR L L N + ++
Sbjct: 94 LTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEV 128
Score = 52 (23.4 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 66 VGTQVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVP 103
V L L N +D TF +L LV LD++ N++ +P
Sbjct: 186 VNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLP 226
Score = 37 (18.1 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 264 TTVVTI--ILTACFVVLCIILLKAKRKRYADVNRRYLE 299
T ++ I ++ A +V I+LL + K Y D + R ++
Sbjct: 535 TMIIAIGGVIVASVLVF-IVLLMIRYKVYGDGDSRRIK 571
>ZFIN|ZDB-GENE-071126-1 [details] [associations]
symbol:lrrn1 "leucine rich repeat neuronal 1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-071126-1 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE EMBL:CU468905 EMBL:BC155656
IPI:IPI00806642 RefSeq:NP_001124166.1 UniGene:Dr.29133
IntAct:A9JRH0 Ensembl:ENSDART00000084389 GeneID:568527
KEGG:dre:568527 NextBio:20889219 Uniprot:A9JRH0
Length = 717
Score = 133 (51.9 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 48/160 (30%), Positives = 77/160 (48%)
Query: 12 MIYEWRV-YIMVLVCTGCLQVFA-ECPSTCECK---W----KGGKE--TVLCKAKNFTTI 60
++ E ++ +I++L G V + ECP C C+ W +E TV C + T I
Sbjct: 8 LVVEGQICFILLLAVLGLSSVHSTECPQLCVCEIRPWFTPQSTYREATTVDCNDLHLTRI 67
Query: 61 PEQLDVGTQVLDLSDNFLDRYT--FRKLINLVELDLSYNQIQFVPSHILDSILELRELKL 118
P L TQVL L N++ R + +L+NL ELDLS N + L ++ +L L L
Sbjct: 68 PGNLSADTQVLLLQSNYIARTSEELEQLLNLTELDLSQNNFSNIRDIGLTNMSQLTTLHL 127
Query: 119 SGNPIQKITHEAFINVPKLNLEDFACSPN-IRPITPDVTA 157
N I ++ + ++ NL++ + N I I P+ A
Sbjct: 128 EENQIVEMPDFSLQDLT--NLQELYINHNQISSIAPNAFA 165
Score = 91 (37.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 35/106 (33%), Positives = 49/106 (46%)
Query: 144 CSPNIRPIT-PD-VTAEENENVTLSCRATGSPVPKIKWIFKE--KIIANISSGLANMNKR 199
C P I T P+ + + V L CRA P P+I W+ K++ + S +K
Sbjct: 423 CLPMISHDTFPNHLNLDIGMTVDLDCRAMAEPEPEIYWVTPSGNKVMMDTVS-----DKY 477
Query: 200 QYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN--GAGEVFTNISLN 243
Q +NS L I + + DSG YTC A+N GA T I +N
Sbjct: 478 Q-----LNSAGTLRISYIQVDDSGHYTCVAQNTEGADTRVTAIRVN 518
Score = 73 (30.8 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 27/79 (34%), Positives = 34/79 (43%)
Query: 62 EQLDVGTQVLDLSDNFLDRYTFRKLIN---LVELDLSYNQIQFVPSHILDSILELRELKL 118
EQL + LDLS N L N L L L NQI +P L + L+EL +
Sbjct: 93 EQL-LNLTELDLSQNNFSNIRDIGLTNMSQLTTLHLEENQIVEMPDFSLQDLTNLQELYI 151
Query: 119 SGNPIQKITHEAFINVPKL 137
+ N I I AF + L
Sbjct: 152 NHNQISSIAPNAFAGLRNL 170
Score = 71 (30.1 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 18/71 (25%), Positives = 36/71 (50%)
Query: 69 QVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITH 128
Q++++ D ++ + L NL EL +++NQI + + + L L L+ N ++ I
Sbjct: 131 QIVEMPD-----FSLQDLTNLQELYINHNQISSIAPNAFAGLRNLLRLHLNSNRLKAIDS 185
Query: 129 EAFINVPKLNL 139
F + P L +
Sbjct: 186 RWFESTPNLEI 196
>ZFIN|ZDB-GENE-050522-160 [details] [associations]
symbol:lrit2 "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 2" species:7955
"Danio rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-050522-160 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HSSP:P07359 EMBL:BC095086 IPI:IPI00493555 RefSeq:NP_001018372.2
UniGene:Dr.82810 ProteinModelPortal:Q504C1 GeneID:553557
KEGG:dre:553557 CTD:340745 HOGENOM:HOG000082676 HOVERGEN:HBG060406
InParanoid:Q504C1 OrthoDB:EOG4X97H6 NextBio:20880298 Uniprot:Q504C1
Length = 561
Score = 117 (46.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 155 VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTI 214
+TA NVTL+C A+ P I+WI+ K++ L+++++ TI+S L I
Sbjct: 259 ITAPLGGNVTLTCSASARPEAVIRWIYALKMLRGFRDILSHVDE-----DTISS--QLVI 311
Query: 215 VAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQP 254
++ +D G+YTC A N G IS++V E + + P
Sbjct: 312 PSLHSADRGLYTCIANNFLGNSSVIISVDVKSPEGSSSHP 351
Score = 105 (42.0 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 31/127 (24%), Positives = 57/127 (44%)
Query: 18 VYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVG-TQV-LDLSD 75
++ +++ C + +EC C C ++ C T IP+ L T++ ++ S
Sbjct: 6 LFHLIVFCILISHISSECFPGCSCGTDRHGRSLTCMETALTGIPDGLPEDLTKIRIEKSQ 65
Query: 76 -NFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
+ L F + L L L++N I + L+ + L EL+L GN ++ + AF
Sbjct: 66 LSELPEAVFSHVKALKHLWLNFNDIAIINIKSLEGLANLTELRLQGNKLRSVPWTAFEET 125
Query: 135 PKLNLED 141
P L + D
Sbjct: 126 PNLKILD 132
Score = 94 (38.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 28/90 (31%), Positives = 44/90 (48%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDF 142
F + NL LDL +N+I +P H L + L L LS N + I+ + F+N P + E+
Sbjct: 122 FEETPNLKILDLKHNRIDALPEHALKFLPGLTYLDLSSNQLSVISKDVFLNWPLYHSEN- 180
Query: 143 ACSPNIRPITPDVTAEENENVTL-SCRATG 171
+ +P +V ++N L CR G
Sbjct: 181 ---KHEKPSASNVVLALHDNPWLCDCRLGG 207
Score = 51 (23.0 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 69 QVLDLSDNFLD---RYTFRKLINLVELDLSYNQIQFVPSHI 106
++LDL N +D + + L L LDLS NQ+ + +
Sbjct: 129 KILDLKHNRIDALPEHALKFLPGLTYLDLSSNQLSVISKDV 169
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 116 (45.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRKLINLVE 91
CP+ C C G + + C + +P+ L LDLS N F+ + L +L E
Sbjct: 47 CPAACHCL---G-DLLDCSRRRLVRLPDPLPAWVTRLDLSHNRLSFIQTSSLSHLQSLQE 102
Query: 92 LDLSYNQIQFVPSHILDSI-LELRELKLSGNPIQKITHE---AFINVPKLNLED 141
+ L+ N+++ +P+ L SI +R+L L+GN I KI E AF ++ L+L +
Sbjct: 103 VKLNNNELETIPN--LGSISANIRQLSLAGNAIDKILPEQLEAFQSLETLDLSN 154
Score = 113 (44.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 49/156 (31%), Positives = 70/156 (44%)
Query: 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTIN 207
+RP+ D T + E L C A GSP P++ W K+ S L + +R + N
Sbjct: 700 LRPLL-DRTVTKGETAVLQCIAGGSPPPRLNWT-KD------DSPLV-VTERHFFAAG-N 749
Query: 208 SLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVA-SL--- 263
L L IV +SD+G YTC N G N+ L+VI T D ++ A SL
Sbjct: 750 QL--LIIVDSDVSDAGKYTCEMSNTLGTERGNVRLSVIPTPTC----DSPHMTAPSLDGD 803
Query: 264 ---TTVVTIILTACFVV----LCIILLKAKRKRYAD 292
T V II C VV + ++++ R+R D
Sbjct: 804 GWATVGVVIIAVVCCVVGTSLVWVVIIYHTRRRNED 839
Score = 103 (41.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 30/96 (31%), Positives = 46/96 (47%)
Query: 152 TP-DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLS 210
TP D+T L C A G P P+I W +K + A +R +++ +
Sbjct: 608 TPMDLTIRAGAMARLECAAVGHPAPQIAW---QK--DGGTDFPAARERRMHVMPEDDVFF 662
Query: 211 NLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIK 246
IV V + D G+Y+C A+N AG V N +L V++
Sbjct: 663 ---IVDVKIEDIGVYSCTAQNSAGSVSANATLTVLE 695
Score = 75 (31.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 83 FRKLINLVELDLSYNQIQFV---PSHILDSILELRELKLSGNPIQKITHEAFINVPKLNL 139
FR L +L LDL N+I + S + LR+L L GN I+ IT +AF + L
Sbjct: 355 FRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEH 414
Query: 140 EDFA 143
D +
Sbjct: 415 LDLS 418
Score = 71 (30.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 28/92 (30%), Positives = 37/92 (40%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL----- 137
F L L +L L N+I+ + + L L LSGN I + AF + KL
Sbjct: 382 FSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHL 441
Query: 138 NLEDFACSPNIRPITPDVTAEENEN--VTLSC 167
N C +R + P AE N V SC
Sbjct: 442 NTSSLLCDCQLRWL-PQWVAENNFQSFVNASC 472
Score = 69 (29.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLN 138
F L N+ L L +N + + L +L LREL LS N I +I+ +A+ KL+
Sbjct: 259 FWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLS 314
Score = 56 (24.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 85 KLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
KL L L+L+ N+I+ V + L+ LK+ N + K+ AF
Sbjct: 213 KLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAF 259
>ZFIN|ZDB-GENE-080723-57 [details] [associations]
symbol:lingo2 "leucine rich repeat and Ig domain
containing 2" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080723-57 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 HOVERGEN:HBG057546 CTD:158038
EMBL:CR788317 IPI:IPI00911397 RefSeq:NP_001139054.1
UniGene:Dr.111487 Ensembl:ENSDART00000102279 GeneID:564052
KEGG:dre:564052 OMA:STAMGCL NextBio:20885199 Uniprot:B8JIN1
Length = 607
Score = 130 (50.8 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 42/132 (31%), Positives = 59/132 (44%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYT---FRKLINLVE 91
CP+ CEC +V C + +PE + + T+ LDLS N L T F L+ L E
Sbjct: 27 CPARCECSVP--TRSVSCHRRRLAQVPEGIPIETRSLDLSKNRLRIVTPQNFSSLLLLEE 84
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNIRPI 151
LDLS N + V + + LR L+L N + + A + +L L D S N I
Sbjct: 85 LDLSNNLLSSVEPNSFRAQPRLRSLRLRSNQLTLLPRGALAGLSELTLLDV--SQNRLVI 142
Query: 152 TPDVTAEENENV 163
D EE +
Sbjct: 143 LLDYGFEEQRRL 154
Score = 91 (37.1 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 27/89 (30%), Positives = 40/89 (44%)
Query: 157 AEENENVTLSCRATGSPVPKIKWIFK-EKIIANISSGLANMNKRQYIIKTINSLSNLTIV 215
AEE + L C A G+P P + W+ + I S+G + ++ T SL
Sbjct: 419 AEEGQRAWLYCSADGAPPPSVSWLTPLRRHITTKSTG-------RVVVHTNGSLE---FR 468
Query: 216 AVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
DSG+Y C A N AG +++L V
Sbjct: 469 MAEPQDSGMYVCVASNPAGNATLSVTLAV 497
Score = 74 (31.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 69 QVLDLSDN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
+VL+LSDN F+ F L +L L L + VP+H L + L L+L I +
Sbjct: 155 RVLELSDNELVFIAPRAFSGLASLRSLTLQRCNLSTVPTHALAHLHGLTSLRLRDLGIAE 214
Query: 126 ITHEAFINVPKL-NLE 140
+ F +P+L +LE
Sbjct: 215 LQAHTFKGLPRLKHLE 230
>FB|FBgn0039862 [details] [associations]
symbol:kek6 "kek6" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 EMBL:AE014297 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 GO:GO:0046331 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104028 EMBL:BT100194
RefSeq:NP_651880.1 UniGene:Dm.24119 SMR:Q9V9V6
EnsemblMetazoa:FBtr0085821 GeneID:43729 KEGG:dme:Dmel_CG1804
UCSC:CG1804-RA CTD:43729 FlyBase:FBgn0039862 eggNOG:NOG238103
InParanoid:Q9V9V6 OMA:MGRRITA OrthoDB:EOG4S1RQ2 GenomeRNAi:43729
NextBio:835480 Uniprot:Q9V9V6
Length = 836
Score = 173 (66.0 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 67/260 (25%), Positives = 111/260 (42%)
Query: 69 QVLDLSDNFLD---RYTFRKLINLVELDLSYN------QIQFVPSHILDSILELRELKLS 119
+ L+L +N L+ Y F+ + NL L L N +++ ++S L L
Sbjct: 194 EFLNLKNNLLESLSEYVFQHMANLKTLSLEENPWQCNCKLRKFRGWYVNSRLSSVSLVCK 253
Query: 120 GNPIQKITHEAFINVPKLNLEDFACSPNIRPITPDVTA--EENENVTLSCRATGSPVPKI 177
G P QK + +V E F C P + + + N T SC G P+P++
Sbjct: 254 GPPAQK--DRTWDSVDD---ELFGCPPRVEIFNNEEVQNIDIGSNTTFSCLVYGDPLPEV 308
Query: 178 KWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVF 237
W KI+ N N+ I + SNLT+ VT D+G Y C N G +
Sbjct: 309 AWELNGKILDN-----DNVLFESESIASDKLWSNLTVFNVTSLDAGTYACTGSNSIGSMT 363
Query: 238 TNISLNVIKVETAVAQPDPV---Y--LVASLTTVVTIILTACFVVLCIILLKAKRKRYAD 292
NIS+ + ++ V + P Y L+ + V ++++ FVV C+ ++ R+A
Sbjct: 364 QNISIYLSEIVQHVLEKTPETFWYFGLIMGIFGTVFLLISISFVV-CLCKRTTRQHRHA- 421
Query: 293 VNRRYLEDKCESNHQQSKPL 312
N+ ++ N Q+ K L
Sbjct: 422 -NKAGVKSSVSFNDQEKKLL 440
Score = 164 (62.8 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 35/110 (31%), Positives = 59/110 (53%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRKL--INL 89
C S C CKW GK++ +C + TTIP L QVL L+DN +L+R F L +NL
Sbjct: 38 CASNCTCKWTNGKKSAICSSLQLTTIPNTLSTELQVLVLNDNHIPYLNREEFSTLGLLNL 97
Query: 90 VELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNL 139
+ L +++Q++ ++ L E+ LS N ++ + + F+ +L +
Sbjct: 98 QRIYLKKSEVQYIHKESFRNLKILVEIDLSDNKLEMLDKDTFMGNDRLRI 147
>ZFIN|ZDB-GENE-050522-533 [details] [associations]
symbol:lrrc4c "leucine rich repeat containing 4C"
species:7955 "Danio rerio" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-050522-533 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:BC095314 IPI:IPI00495437
RefSeq:NP_001018583.1 UniGene:Dr.79725 ProteinModelPortal:Q503I7
GeneID:553785 KEGG:dre:553785 InParanoid:Q503I7 NextBio:20880504
Uniprot:Q503I7
Length = 647
Score = 119 (46.9 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD 79
+ +LV G ++ CPS C C + K V+C + +P+ + T+ L+L +N +
Sbjct: 34 LQLLVVAGLVRA-QTCPSVCSCSNQFSK--VICTRRGLRDVPDGISTNTRYLNLQENLIQ 90
Query: 80 RY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
+F+ L +L L LS N I+ + + + L L+L N + I + AF + K
Sbjct: 91 VIKVDSFKHLRHLEILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTTIPNGAFEYLSK 150
Query: 137 L 137
L
Sbjct: 151 L 151
Score = 99 (39.9 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 33/118 (27%), Positives = 48/118 (40%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CRA + + WI I ++ G
Sbjct: 342 IGELDQNYFHCYAPVIVEPPADLNVTEGMAAELKCRANS--LTSVSWITPNGSI--MTHG 397
Query: 193 LANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETA 250
+ I +N L VTM D+G YTC N AG + +LNV E +
Sbjct: 398 AYKIR-----ISVLND-GTLNFTNVTMQDTGTYTCMVSNSAGNTTASATLNVSSTENS 449
Score = 97 (39.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + F L NL L+L N++ +P+ + + +L+EL L NPI+
Sbjct: 104 EILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIES 163
Query: 126 ITHEAFINVPKLNLED 141
I AF VP L D
Sbjct: 164 IPSYAFNRVPSLRRLD 179
Score = 76 (31.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 26/89 (29%), Positives = 44/89 (49%)
Query: 56 NFTTIPEQLD-VGTQVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSIL 111
N IP + V L++S N L +F+ L++L +L + + QIQ + + D +
Sbjct: 209 NLKEIPNLIPLVRLDELEMSGNQLSIIRPGSFKGLVHLQKLWMMHAQIQTIERNAFDDLQ 268
Query: 112 ELRELKLSGNPIQKITHEAFINVPKLNLE 140
L EL L+ N + + H+ F P +LE
Sbjct: 269 SLVELNLAHNNLTLLPHDLF--TPLHHLE 295
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 71 LDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSI-----LELRELK----L 118
L+L DN L F L L EL L N I+ +PS+ + + L+L ELK +
Sbjct: 130 LELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYI 189
Query: 119 SGNPIQKITHEAFINVPKLNLEDFACSPNIRPI 151
S + +++ ++N+ NL++ PN+ P+
Sbjct: 190 SEGAFEGLSNLRYLNLGMCNLKEI---PNLIPL 219
Score = 67 (28.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
++R F L +LVEL+L++N + +P + + L + L NP
Sbjct: 259 IERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLHHNP 303
>ZFIN|ZDB-GENE-080723-63 [details] [associations]
symbol:zgc:195063 "zgc:195063" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-080723-63
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104028 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 OrthoDB:EOG4THVT6
EMBL:BX510944 EMBL:BC163761 IPI:IPI00611152 RefSeq:NP_001122166.1
UniGene:Dr.110759 Ensembl:ENSDART00000077823 GeneID:558559
KEGG:dre:558559 OMA:PYLINIT NextBio:20882530 Uniprot:B3DK88
Length = 636
Score = 114 (45.2 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 40/137 (29%), Positives = 58/137 (42%)
Query: 13 IYEWRVYIMVLVCTGCLQVFAECPSTCECKWKG-----GKETVLCKAKNFTTIPEQLDVG 67
+Y V ++L C Q F CPS C C + G G +VLC + + IP + +
Sbjct: 1 MYRLLVAQVLLGCWSVAQPF--CPSQCTCVYHGRSDGTGSRSVLCNDPDMSDIPVNVPLD 58
Query: 68 TQVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQ 124
T L + + R F L L L ++YN I V ++ L EL+L GN I
Sbjct: 59 TVKLRVEKTAVRRVPTEAFYYLSELRYLWITYNSITSVDPGSFYNLKVLHELRLDGNMIA 118
Query: 125 KITHEAFINVPKLNLED 141
E+ +P L D
Sbjct: 119 TFPWESLKEMPSLKTLD 135
Score = 104 (41.7 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 31/117 (26%), Positives = 51/117 (43%)
Query: 141 DFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQ 200
D P + +T+ NV L C A G P P + W + + N + + + +
Sbjct: 247 DQCVKPTVMTSATKITSPLGSNVLLRCDANGFPTPTLLWTTADGSVVN--NTVVQESPGE 304
Query: 201 YIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPV 257
+ +I SL + + D+G Y C+AKN AG I+L+V V+ P P+
Sbjct: 305 GVRWSILSLHS-----IVFKDAGDYRCKAKNVAGNAEAYITLSVDGVQPTTPFP-PI 355
Score = 62 (26.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 69 QVLDLSDNFLDRYTFRK---LINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
+ LDL +N L LIN+ LD+S N++ +PS ++D ++ S N QK
Sbjct: 132 KTLDLHNNRLTSVPVEAAPYLINITYLDISSNKLTTLPSDLVDIWPPFSGIQPSANTSQK 191
>MGI|MGI:1915522 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing
1" species:10090 "Mus musculus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP;IDA] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IDA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:1915522 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043491 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0021954 HSSP:P21809 GO:GO:0048715
GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 EMBL:AK027262 EMBL:AK163538
EMBL:BC052384 EMBL:BC065696 EMBL:AY324324 IPI:IPI00134200
RefSeq:NP_851419.1 UniGene:Mm.246605 ProteinModelPortal:Q9D1T0
SMR:Q9D1T0 IntAct:Q9D1T0 STRING:Q9D1T0 PhosphoSite:Q9D1T0
PaxDb:Q9D1T0 PRIDE:Q9D1T0 Ensembl:ENSMUST00000053568
Ensembl:ENSMUST00000114247 GeneID:235402 KEGG:mmu:235402
InParanoid:Q9D1T0 ChiTaRS:LINGO1 NextBio:382644 Bgee:Q9D1T0
Genevestigator:Q9D1T0 Uniprot:Q9D1T0
Length = 614
Score = 133 (51.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 16 WRVYIMVLVCTGCLQVFAE-CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
W+ I++LV L A CP CEC + VLC K F +PE + T++LDL
Sbjct: 17 WQP-ILLLVLGSVLSGSATGCPPRCECSAQD--RAVLCHRKRFVAVPEGIPTETRLLDLG 73
Query: 75 DN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
N L++ F +L EL+L+ N + V +++ LR L L N ++ I F
Sbjct: 74 KNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVF 133
Query: 132 I---NVPKLNLED 141
N+ KL++ +
Sbjct: 134 TGLSNLTKLDISE 146
Score = 81 (33.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 31/107 (28%), Positives = 43/107 (40%)
Query: 131 FINVPKLNLED-FACS-PNIRPI-TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIA 187
F + P + L + F C +IR V +E V CRA G P P I W+ K +
Sbjct: 401 FKDFPDVLLPNYFTCRRAHIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLV 460
Query: 188 NISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG 234
+ S N R T+ L + + D+G Y C A N G
Sbjct: 461 SAKS-----NGRL----TVFPDGTLEVRYAQVQDNGTYLCIAANAGG 498
Score = 80 (33.2 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF--IN-VPKLNL 139
F L NL +LD+S N+I + ++ + L+ L++ N + I+H AF +N + +L L
Sbjct: 133 FTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 192
Query: 140 E 140
E
Sbjct: 193 E 193
>UNIPROTKB|G3V881 [details] [associations]
symbol:Lingo1 "Leucine rich repeat neuronal 6A, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473975
GeneTree:ENSGT00690000101682 CTD:84894 RefSeq:NP_001094192.1
UniGene:Rn.20269 ProteinModelPortal:G3V881 SMR:G3V881 PRIDE:G3V881
Ensembl:ENSRNOT00000023084 GeneID:315691 KEGG:rno:315691
NextBio:669664 Uniprot:G3V881
Length = 620
Score = 133 (51.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 16 WRVYIMVLVCTGCLQVFAE-CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
W+ I++LV L A CP CEC + VLC K F +PE + T++LDL
Sbjct: 23 WQP-ILLLVLGSVLSGSATGCPPRCECSAQD--RAVLCHRKRFVAVPEGIPTETRLLDLG 79
Query: 75 DN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
N L++ F +L EL+L+ N + V +++ LR L L N ++ I F
Sbjct: 80 KNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVF 139
Query: 132 I---NVPKLNLED 141
N+ KL++ +
Sbjct: 140 TGLSNLTKLDISE 152
Score = 81 (33.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 31/107 (28%), Positives = 43/107 (40%)
Query: 131 FINVPKLNLED-FACS-PNIRPI-TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIA 187
F + P + L + F C +IR V +E V CRA G P P I W+ K +
Sbjct: 407 FKDFPDVLLPNYFTCRRAHIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLV 466
Query: 188 NISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG 234
+ S N R T+ L + + D+G Y C A N G
Sbjct: 467 SAKS-----NGRL----TVFPDGTLEVRYAQVQDNGTYLCIAANAGG 504
>UNIPROTKB|F1MBT2 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:DAAA02052480
IPI:IPI01003440 Ensembl:ENSBTAT00000031490 Uniprot:F1MBT2
Length = 614
Score = 133 (51.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 16 WRVYIMVLVCTGCLQVFAE-CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
W+ I++LV L A CP CEC + VLC K F +PE + T++LDL
Sbjct: 17 WQP-ILLLVLGSVLSGSATGCPPRCECSAQD--RAVLCHRKRFVAVPEGIPTETRLLDLG 73
Query: 75 DN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
N L++ F +L EL+L+ N + V +++ LR L L N ++ I F
Sbjct: 74 KNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVF 133
Query: 132 I---NVPKLNLED 141
N+ KL++ +
Sbjct: 134 TGLSNLTKLDISE 146
Score = 80 (33.2 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 31/107 (28%), Positives = 42/107 (39%)
Query: 131 FINVPKLNLED-FACS-PNIRPI-TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIA 187
F + P + L + F C IR V +E V CRA G P P I W+ K +
Sbjct: 401 FKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLV 460
Query: 188 NISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG 234
+ S N R T+ L + + D+G Y C A N G
Sbjct: 461 SAKS-----NGRL----TVFPDGTLEVRYAQVQDNGTYLCIAANAGG 498
>UNIPROTKB|F1PGX0 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0021954 "central nervous
system neuron development" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:AAEX03016347
ProteinModelPortal:F1PGX0 Ensembl:ENSCAFT00000028688 Uniprot:F1PGX0
Length = 620
Score = 133 (51.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 16 WRVYIMVLVCTGCLQVFAE-CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
W+ I++LV L A CP CEC + VLC K F +PE + T++LDL
Sbjct: 23 WQP-ILLLVLGSVLSGSATGCPPRCECSAQD--RAVLCHRKRFVAVPEGIPTETRLLDLG 79
Query: 75 DN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
N L++ F +L EL+L+ N + V +++ LR L L N ++ I F
Sbjct: 80 KNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIPLGVF 139
Query: 132 I---NVPKLNLED 141
N+ KL++ +
Sbjct: 140 TGLSNLTKLDISE 152
Score = 80 (33.2 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 31/107 (28%), Positives = 42/107 (39%)
Query: 131 FINVPKLNLED-FACS-PNIRPI-TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIA 187
F + P + L + F C IR V +E V CRA G P P I W+ K +
Sbjct: 407 FKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLV 466
Query: 188 NISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG 234
+ S N R T+ L + + D+G Y C A N G
Sbjct: 467 SAKS-----NGRL----TVFPDGTLEVRYAQVQDNGTYLCIAANAGG 504
>UNIPROTKB|Q96FE5 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005154 "epidermal growth factor receptor binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0048011 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
EMBL:CH471136 GO:GO:0043491 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0050771
GO:GO:0021954 MEROPS:I43.001 GO:GO:0048715 Orphanet:862
OrthoDB:EOG40S0F8 CTD:84894 HOVERGEN:HBG057546 OMA:RIRDRKP
EMBL:AY324320 EMBL:AY324322 EMBL:AY324323 EMBL:AY358284
EMBL:AK027500 EMBL:AK291363 EMBL:BC011057 EMBL:BC068558
EMBL:AL834260 IPI:IPI00465325 IPI:IPI00795326 RefSeq:NP_116197.4
UniGene:Hs.656765 UniGene:Hs.736275 PDB:2ID5 PDBsum:2ID5
ProteinModelPortal:Q96FE5 SMR:Q96FE5 IntAct:Q96FE5
MINT:MINT-1378183 STRING:Q96FE5 PhosphoSite:Q96FE5 PaxDb:Q96FE5
PRIDE:Q96FE5 Ensembl:ENST00000355300 Ensembl:ENST00000561030
GeneID:84894 KEGG:hsa:84894 UCSC:uc002bct.1 GeneCards:GC15M077905
H-InvDB:HIX0012466 HGNC:HGNC:21205 HPA:HPA011630 MIM:609791
neXtProt:NX_Q96FE5 PharmGKB:PA162394087 InParanoid:Q96FE5
EvolutionaryTrace:Q96FE5 GenomeRNAi:84894 NextBio:75236 Bgee:Q96FE5
CleanEx:HS_LINGO1 Genevestigator:Q96FE5 Uniprot:Q96FE5
Length = 620
Score = 133 (51.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 16 WRVYIMVLVCTGCLQVFAE-CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
W+ I++LV L A CP CEC + VLC K F +PE + T++LDL
Sbjct: 23 WQP-ILLLVLGSVLSGSATGCPPRCECSAQD--RAVLCHRKRFVAVPEGIPTETRLLDLG 79
Query: 75 DN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
N L++ F +L EL+L+ N + V +++ LR L L N ++ I F
Sbjct: 80 KNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVF 139
Query: 132 I---NVPKLNLED 141
N+ KL++ +
Sbjct: 140 TGLSNLTKLDISE 152
Score = 80 (33.2 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 31/107 (28%), Positives = 42/107 (39%)
Query: 131 FINVPKLNLED-FACS-PNIRPI-TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIA 187
F + P + L + F C IR V +E V CRA G P P I W+ K +
Sbjct: 407 FKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLV 466
Query: 188 NISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG 234
+ S N R T+ L + + D+G Y C A N G
Sbjct: 467 SAKS-----NGRL----TVFPDGTLEVRYAQVQDNGTYLCIAANAGG 504
>UNIPROTKB|F1SJ87 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:CT954219
Ensembl:ENSSSCT00000002097 Uniprot:F1SJ87
Length = 620
Score = 133 (51.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 16 WRVYIMVLVCTGCLQVFAE-CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
W+ I++LV L A CP CEC + VLC K F +PE + T++LDL
Sbjct: 23 WQP-ILLLVLGSVLSGSATGCPPRCECSAQD--RAVLCHRKRFVAVPEGIPTETRLLDLG 79
Query: 75 DN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
N L++ F +L EL+L+ N + V +++ LR L L N ++ I F
Sbjct: 80 KNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVF 139
Query: 132 I---NVPKLNLED 141
N+ KL++ +
Sbjct: 140 TGLSNLTKLDISE 152
Score = 80 (33.2 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 31/107 (28%), Positives = 42/107 (39%)
Query: 131 FINVPKLNLED-FACS-PNIRPI-TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIA 187
F + P + L + F C IR V +E V CRA G P P I W+ K +
Sbjct: 407 FKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLV 466
Query: 188 NISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG 234
+ S N R T+ L + + D+G Y C A N G
Sbjct: 467 SAKS-----NGRL----TVFPDGTLEVRYAQVQDNGTYLCIAANAGG 504
>ZFIN|ZDB-GENE-091116-44 [details] [associations]
symbol:lrrc4bb "leucine rich repeat containing 4Bb"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091116-44 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101682
PANTHER:PTHR24369:SF7 EMBL:CU672238 EMBL:CU681836 IPI:IPI00961430
Ensembl:ENSDART00000007208 Uniprot:E7F2A9
Length = 745
Score = 116 (45.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
CP+ C C + + V+C K+ +P+ + T+ L+L +N + TF+ L +L
Sbjct: 58 CPALCSCSNQASR--VICTKKSLNEVPQSISSNTRYLNLQENSIQVIRSDTFKHLNHLEI 115
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L LS NQI+ + + + L L+L N + + +AF + KL
Sbjct: 116 LQLSKNQIRQIEVGAFNGLPNLITLELFDNRLPLVPSQAFEYLSKL 161
Score = 107 (42.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 28/76 (36%), Positives = 41/76 (53%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + + F L NL+ L+L N++ VPS + + +LREL L NPI+
Sbjct: 114 EILQLSKNQIRQIEVGAFNGLPNLITLELFDNRLPLVPSQAFEYLSKLRELWLRNNPIET 173
Query: 126 ITHEAFINVPKLNLED 141
+ AF VP L D
Sbjct: 174 LPAYAFHRVPSLRRLD 189
Score = 100 (40.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 37/131 (28%), Positives = 53/131 (40%)
Query: 137 LNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLAN 195
L+ DF C +P I D+ E L CR TG+ + + W+ + ++ G
Sbjct: 355 LDQRDFTCYAPVIVEPPTDLNVTEGMAAELKCR-TGTSMTSVNWLTPNGTL--MTHGAYK 411
Query: 196 MNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPD 255
+ I ++ L VTM D+G YTC N AG LNV + PD
Sbjct: 412 VR-----ISVLHD-GTLNFTNVTMQDTGPYTCMVTNSAGNTTATAVLNV-------SAPD 458
Query: 256 PVYLVASLTTV 266
P + TTV
Sbjct: 459 PGNGYSYFTTV 469
Score = 73 (30.8 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
++R F L NL EL+LS+N + +P + + +L + L+ NP
Sbjct: 269 IERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHNP 313
Score = 73 (30.8 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 57 FTTIPE--QLDVGTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELR 114
F +P +LD+G ++ LS F+ F L+NL L+L ++ VP+ L ++ L
Sbjct: 179 FHRVPSLRRLDLG-ELRKLS--FISEAAFEGLLNLRFLNLGMCGLKDVPN--LTPLVRLE 233
Query: 115 ELKLSGNPIQKITHEAF 131
EL+LSGN + + +F
Sbjct: 234 ELELSGNQLGVVRPGSF 250
>UNIPROTKB|Q50L44 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0043491 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 OrthoDB:EOG40S0F8
EMBL:AB195262 IPI:IPI00607536 RefSeq:NP_001019748.1
UniGene:Gga.13113 HSSP:Q05793 ProteinModelPortal:Q50L44 SMR:Q50L44
STRING:Q50L44 Ensembl:ENSGALT00000004272 GeneID:415344
KEGG:gga:415344 CTD:84894 HOVERGEN:HBG057546 InParanoid:Q50L44
OMA:RIRDRKP NextBio:20818967 ArrayExpress:Q50L44 Uniprot:Q50L44
Length = 613
Score = 127 (49.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 16 WRVYIMVLVCTGCLQVFAE-CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
W+ I++L+ L A CP CEC + + VLC K F +PE + T+ LDL
Sbjct: 16 WQP-ILLLMLGSILSGSATGCPPRCECSAQ--ERAVLCHRKRFMVVPEGIPTETRQLDLG 72
Query: 75 DN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
N L++ F +L EL+L+ N I + +++ LR L L N ++ I F
Sbjct: 73 KNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVF 132
Query: 132 I---NVPKLNLED 141
N+ KL++ +
Sbjct: 133 TGLSNLTKLDISE 145
Score = 84 (34.6 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 32/107 (29%), Positives = 44/107 (41%)
Query: 131 FINVPKLNLED-FACS-PNIRPITPD-VTAEENENVTLSCRATGSPVPKIKWIFKEKIIA 187
F + P + L + F C IR P + +E V CRA G P P I W+ K +
Sbjct: 400 FKDFPDVLLPNYFTCRRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPAIMWLSPRKHL- 458
Query: 188 NISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG 234
IS+ N R T+ L + + D+G Y C A N G
Sbjct: 459 -IST---KTNGRL----TVFPDGTLEVRYAQIQDNGTYLCIASNAGG 497
Score = 80 (33.2 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF--IN-VPKLNL 139
F L NL +LD+S N+I + ++ + L+ L++ N + I+H AF +N + +L L
Sbjct: 132 FTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 191
Query: 140 E 140
E
Sbjct: 192 E 192
>UNIPROTKB|Q92626 [details] [associations]
symbol:PXDN "Peroxidasin homolog" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005152
"interleukin-1 receptor antagonist activity" evidence=NAS]
[GO:0006955 "immune response" evidence=NAS] [GO:0004601 "peroxidase
activity" evidence=IDA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0030198 "extracellular matrix
organization" evidence=IDA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=IDA] [GO:0020037 "heme binding"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0001960
"negative regulation of cytokine-mediated signaling pathway"
evidence=NAS] InterPro:IPR001611 InterPro:IPR001007
InterPro:IPR002007 InterPro:IPR007110 InterPro:IPR010255
InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457
PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS50292
PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214 GO:GO:0005783
GO:GO:0005615 EMBL:CH471053 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006955 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
Orphanet:289499 GO:GO:0005201 Gene3D:1.10.640.10 GO:GO:0005152
CleanEx:HS_PRG2 HSSP:P05164 eggNOG:NOG262194 HOGENOM:HOG000016084
HOVERGEN:HBG108312 EMBL:AF200348 EMBL:EF090903 EMBL:D86983
EMBL:BC098579 IPI:IPI00016112 IPI:IPI00791587 RefSeq:NP_036425.1
UniGene:Hs.332197 ProteinModelPortal:Q92626 SMR:Q92626
IntAct:Q92626 STRING:Q92626 PeroxiBase:3355 PhosphoSite:Q92626
DMDM:172045828 PaxDb:Q92626 PRIDE:Q92626 DNASU:7837
Ensembl:ENST00000252804 GeneID:7837 KEGG:hsa:7837 UCSC:uc002qxa.3
UCSC:uc002qxb.1 CTD:7837 GeneCards:GC02M001635 HGNC:HGNC:14966
HPA:HPA012375 MIM:605158 neXtProt:NX_Q92626 PharmGKB:PA128394535
InParanoid:Q92626 OMA:EPVITWN OrthoDB:EOG4J1179 ChiTaRS:PXDN
GenomeRNAi:7837 NextBio:30238 ArrayExpress:Q92626 Bgee:Q92626
CleanEx:HS_PXDN Genevestigator:Q92626 Uniprot:Q92626
Length = 1479
Score = 120 (47.3 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 46/143 (32%), Positives = 65/143 (45%)
Query: 21 MVLVCT-GCLQVFAE-----CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
+VL C G L V A+ CPS C C + TV C +P + T +LDL
Sbjct: 16 LVLFCAWGTLAVVAQKPGAGCPSRCLCF----RTTVRCMHLLLEAVPA-VAPQTSILDLR 70
Query: 75 DNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
N + FR+L NL L L+ NQI+ +PS + + L+ L L N IQ I +AF
Sbjct: 71 FNRIREIQPGAFRRLRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAF 130
Query: 132 INVPKLNLEDFACSPNIRPITPD 154
+ L + + I + PD
Sbjct: 131 KGLASLE-QLYLHFNQIETLDPD 152
Score = 100 (40.3 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 31/107 (28%), Positives = 45/107 (42%)
Query: 133 NVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISS 191
+V + E+ C P I D V +CRA G+P P+I W+ ++ +
Sbjct: 232 SVATITPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRNNNELSMKTD 291
Query: 192 GLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFT 238
N+ ++ L I +D GIY C AKN AGEV T
Sbjct: 292 SRLNL---------LDD-GTLMIQNTQETDQGIYQCMAKNVAGEVKT 328
Score = 98 (39.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 34/125 (27%), Positives = 53/125 (42%)
Query: 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK 204
+P I D T E NV L C + G P P I W K+ + SG +++ ++
Sbjct: 524 TPVFASIPSDTTVEVGANVQLPCSSQGEPEPAITWN-KDGVQVT-ESGKFHISPEGFL-- 579
Query: 205 TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLT 264
TIN V +D+G Y C A+N G ++ L+V V DP + +
Sbjct: 580 TIND--------VGPADAGRYECVARNTIGSASVSMVLSV-NVPDVSRNGDPFVATSIVE 630
Query: 265 TVVTI 269
+ T+
Sbjct: 631 AIATV 635
Score = 82 (33.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 28/89 (31%), Positives = 36/89 (40%)
Query: 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTIN 207
I+P +V E+VTL C ATG P P+I W ++ + +N I
Sbjct: 346 IQPQNTEVLV--GESVTLECSATGHPPPRISWTRGDRTPLPVDP---RVN--------IT 392
Query: 208 SLSNLTIVAVTMSDSGIYTCRAKNGAGEV 236
L I V DSG Y C A N V
Sbjct: 393 PSGGLYIQNVVQGDSGEYACSATNNIDSV 421
Score = 70 (29.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 73 LSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHE 129
L++N + R F L NL L L N+IQ + + L +L L N I+ + +
Sbjct: 93 LNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQIETLDPD 152
Query: 130 AFINVPKL 137
+F ++PKL
Sbjct: 153 SFQHLPKL 160
>ZFIN|ZDB-GENE-080327-13 [details] [associations]
symbol:lrrc3 "leucine rich repeat containing 3"
species:7955 "Danio rerio" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-080327-13
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00390000003913
HOGENOM:HOG000073532 HOVERGEN:HBG052349 CTD:81543 eggNOG:NOG318731
OMA:HCECALQ OrthoDB:EOG48PMM1 EMBL:BX247868 EMBL:CU468760
IPI:IPI00876743 RefSeq:NP_001107114.1 UniGene:Dr.116517
ProteinModelPortal:A8WHP9 Ensembl:ENSDART00000113408
Ensembl:ENSDART00000142888 GeneID:100001372 KEGG:dre:100001372
NextBio:20785015 Bgee:A8WHP9 Uniprot:A8WHP9
Length = 266
Score = 157 (60.3 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 48/158 (30%), Positives = 75/158 (47%)
Query: 22 VLVCTGCLQV--FAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD 79
+L+ CL V FA CP +C C + V C ++N IP L T L LS N +
Sbjct: 25 LLLAVICLSVPSFA-CPKSCHCSERNSLTVVQCSSRNLEEIPPDLPHDTVSLQLSSNHIT 83
Query: 80 RY---TFRKLINLVELDLSYNQIQFVPSHILDSILE-LRELKLSGNPIQKITHEAFINV- 134
+ F+ L L ELDLS N I+ V + + E LR L LS N +Q + EAF +
Sbjct: 84 KIPNQAFKNLPWLQELDLSRNAIETVDAGAFKGVSESLRTLDLSHNHMQGVPKEAFARLH 143
Query: 135 PKLNLED--FACSPNIRPITPDVTAEENENVTLSCRAT 170
K++L + + C ++ + ++ + +SC +
Sbjct: 144 AKISLSNNPWHCECTLQEVLRELRLDPETVNEVSCHTS 181
>MGI|MGI:106036 [details] [associations]
symbol:Lrrn3 "leucine rich repeat protein 3, neuronal"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=ISO] [GO:0032403 "protein
complex binding" evidence=ISO] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:106036
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131 MEROPS:I43.001
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 CTD:54674 OMA:RWINMNK OrthoDB:EOG4MGS6W
EMBL:D49802 EMBL:AK036316 EMBL:BC069041 IPI:IPI00314773
RefSeq:NP_001258637.1 RefSeq:NP_001258638.1 RefSeq:NP_034863.1
UniGene:Mm.39913 ProteinModelPortal:Q8CBC6 SMR:Q8CBC6 STRING:Q8CBC6
PRIDE:Q8CBC6 Ensembl:ENSMUST00000043884 GeneID:16981 KEGG:mmu:16981
UCSC:uc007nln.1 InParanoid:Q8CBC6 NextBio:291064 Bgee:Q8CBC6
CleanEx:MM_LRRN3 Genevestigator:Q8CBC6
GermOnline:ENSMUSG00000036295 Uniprot:Q8CBC6
Length = 707
Score = 122 (48.0 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 42/127 (33%), Positives = 63/127 (49%)
Query: 133 NVPKLNLEDFA--CSPNIRPIT-P-DVTAEENENVTLSCRATGSPVPKIKWIFK--EKII 186
NV +++ D C P I P + P D+ E + V+L CRAT P P+I WI +K++
Sbjct: 406 NVRQVHFRDMMEICLPLIAPESFPSDLDVEADSYVSLHCRATAEPQPEIYWITPSGKKLL 465
Query: 187 ANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIK 246
N M ++ Y+ +S L I +T + G+YTC A N G +I +IK
Sbjct: 466 PN------TMREKFYV----HSEGTLEIRGITPKEGGLYTCIATNLVGADLKSI---MIK 512
Query: 247 VETAVAQ 253
V +V Q
Sbjct: 513 VGGSVPQ 519
Score = 88 (36.0 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 36/153 (23%), Positives = 67/153 (43%)
Query: 17 RVYIMV-LVCTGCLQVF---AECPSTCECK---WKGGKE------TVLCKAKNFTTIPEQ 63
+V++++ L T +Q +CP C C+ W + TV C P +
Sbjct: 7 QVHVLLGLAITTLVQAIDKKVDCPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPAR 66
Query: 64 LDVGTQVLDLSDNFLDR--YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGN 121
L TQ+L L N + R ++ +NL LDLS N + V + + + +L + L N
Sbjct: 67 LPADTQILLLQTNNIARIEHSTDFPVNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEEN 126
Query: 122 PIQKITHEAFINVPKLNLEDFACSPNI-RPITP 153
+ ++ + + NL++ + N+ I+P
Sbjct: 127 KLTELPEKCLYGLS--NLQELYVNHNLLSTISP 157
Score = 78 (32.5 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 27/95 (28%), Positives = 44/95 (46%)
Query: 48 ETVLCKAKNFTTIPEQLD--VGTQVLDLSDNFLDRYT---FRKLINLVELDLSYNQIQFV 102
+ +L + N I D V LDLS N L T +K+ L+ + L N++ +
Sbjct: 72 QILLLQTNNIARIEHSTDFPVNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTEL 131
Query: 103 PSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
P L + L+EL ++ N + I+ AFI + L
Sbjct: 132 PEKCLYGLSNLQELYVNHNLLSTISPGAFIGLHNL 166
Score = 59 (25.8 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 76 NFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVP 135
+++ F +L L L L+ N + + ++S+ L+E+ + NPI+ +IN+
Sbjct: 323 SYIHPNAFFRLPKLESLMLNTNALSALYHGTIESLPNLKEISIHSNPIRCDCVIRWINMN 382
Query: 136 KLNL 139
K N+
Sbjct: 383 KTNI 386
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 117 (46.2 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 49/155 (31%), Positives = 67/155 (43%)
Query: 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTIN 207
+RP+ D T + E L C A GSP PK+ W K+ S L + +R + N
Sbjct: 700 LRPLL-DRTVTKGETAVLQCIAGGSPPPKLNWT-KD------DSPLV-VTERHFFAAG-N 749
Query: 208 SLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASL---- 263
L L IV +SD+G YTC N G N+ L+VI T P SL
Sbjct: 750 QL--LIIVDSDVSDAGKYTCEMSNTLGTERGNVRLSVIPTPTC---DSPQMTAPSLDDDG 804
Query: 264 --TTVVTIILTACFVV----LCIILLKAKRKRYAD 292
T V II C VV + ++++ R+R D
Sbjct: 805 WATVGVVIIAVVCCVVGTSLVWVVIIYHTRRRNED 839
Score = 98 (39.6 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 36/118 (30%), Positives = 55/118 (46%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRKLINLVE 91
CP+TC C G + + C K +PE L LDLS N F+ + L +L E
Sbjct: 47 CPTTCRCL--G--DLLDCSRKRLARLPEPLPSWVARLDLSHNRLSFIKASSMSHLQSLRE 102
Query: 92 LDLSYNQIQFVPSHILDSI-LELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNI 148
+ L+ N+++ +P+ L + + L L+GN I +I E L D + S NI
Sbjct: 103 VKLNNNELETIPN--LGPVSANITLLSLAGNRIVEILPEHLKEFQSLETLDLS-SNNI 157
Score = 72 (30.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHI---LDSILELRELKLSGNPIQKITHEAFINVPKLNL 139
FR L +L LDL N+I + + + +LR L L GN I+ IT +AF + L
Sbjct: 355 FRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKAFTGLDALEH 414
Query: 140 EDFA 143
D +
Sbjct: 415 LDLS 418
Score = 59 (25.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 26/92 (28%), Positives = 35/92 (38%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL----- 137
F L L L L N+I+ + + L L LS N I + AF + KL
Sbjct: 382 FSGLDKLRRLILQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHL 441
Query: 138 NLEDFACSPNIRPITPDVTAEENEN--VTLSC 167
N C ++ + P AE N V SC
Sbjct: 442 NTSSLLCDCQLKWL-PQWVAENNFQSFVNASC 472
Score = 57 (25.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 85 KLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNL 139
KL L L+L+ N+I+ V + L+ LK+ N + K+ AF + + +
Sbjct: 213 KLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEI 267
Score = 56 (24.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/67 (23%), Positives = 32/67 (47%)
Query: 92 LDLSYNQIQFVPSHILDSI--LELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNIR 149
LD S ++ +P + + L+L +LS ++H + KLN + PN+
Sbjct: 58 LDCSRKRLARLPEPLPSWVARLDLSHNRLSFIKASSMSHLQSLREVKLNNNELETIPNLG 117
Query: 150 PITPDVT 156
P++ ++T
Sbjct: 118 PVSANIT 124
Score = 52 (23.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 20/76 (26%), Positives = 32/76 (42%)
Query: 69 QVLDLSDNFLDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
Q L LS N ++R + + L ELDL++N + + + L L + N +
Sbjct: 290 QELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSY 349
Query: 126 ITHEAFINVPKLNLED 141
I AF + L D
Sbjct: 350 IADCAFRGLSSLKTLD 365
Score = 50 (22.7 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 88 NLVELDLSYNQI-QFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLE 140
N+ L L+ N+I + +P H L L L LS N I ++ AF P L L+
Sbjct: 122 NITLLSLAGNRIVEILPEH-LKEFQSLETLDLSSNNISEL-QTAF---PALQLK 170
>UNIPROTKB|Q9HBW1 [details] [associations]
symbol:LRRC4 "Leucine-rich repeat-containing protein 4"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH236947
MEROPS:I43.001 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AF196976 EMBL:AJ297858 EMBL:AY358307
EMBL:AK172751 EMBL:AK314047 EMBL:BC111561 EMBL:BC111745
IPI:IPI00005516 RefSeq:NP_071426.1 UniGene:Hs.655003 PDB:2DL9
PDB:3ZYI PDBsum:2DL9 PDBsum:3ZYI ProteinModelPortal:Q9HBW1
SMR:Q9HBW1 STRING:Q9HBW1 PhosphoSite:Q9HBW1 DMDM:51701696
PaxDb:Q9HBW1 PRIDE:Q9HBW1 Ensembl:ENST00000249363 GeneID:64101
KEGG:hsa:64101 UCSC:uc003vmk.3 CTD:64101 GeneCards:GC07M127667
HGNC:HGNC:15586 MIM:610486 neXtProt:NX_Q9HBW1 PharmGKB:PA30463
InParanoid:Q9HBW1 KO:K16351 OMA:CGCEAVW OrthoDB:EOG4NGGM6
PhylomeDB:Q9HBW1 EvolutionaryTrace:Q9HBW1 GenomeRNAi:64101
NextBio:65940 ArrayExpress:Q9HBW1 Bgee:Q9HBW1 CleanEx:HS_LRRC4
Genevestigator:Q9HBW1 GermOnline:ENSG00000128594 InterPro:IPR026882
PANTHER:PTHR24369:SF9 Uniprot:Q9HBW1
Length = 653
Score = 109 (43.4 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 31/106 (29%), Positives = 50/106 (47%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRKLINLVE 91
CPS C C + K V+C + + +P+ + T+ L+L +N + TFR L +L
Sbjct: 46 CPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEV 103
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L L N I+ + + + L L+L N + I AF + KL
Sbjct: 104 LQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKL 149
Score = 101 (40.6 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 32/108 (29%), Positives = 44/108 (40%)
Query: 142 FACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQ 200
F CS P I D+ E L CR P+ +KW+ + + +S R
Sbjct: 348 FQCSAPFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHAS-------RH 398
Query: 201 YIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVE 248
I +N L V +SD+G+YTC N AG + LNV E
Sbjct: 399 PRISVLND-GTLNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVSTAE 445
Score = 91 (37.1 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
+VL L N + + F L +L L+L N + +PS + + +LREL L NPI+
Sbjct: 102 EVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIES 161
Query: 126 ITHEAFINVPKL 137
I AF VP L
Sbjct: 162 IPSYAFNRVPSL 173
Score = 74 (31.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 70 VLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
V++ + ++R F L +LVEL+L++N + +P + + L EL L NP
Sbjct: 249 VMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNP 301
>UNIPROTKB|F1PZW2 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051965 "positive regulation of synapse
assembly" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360
OMA:NNTTCCA PANTHER:PTHR24369:SF7 EMBL:AAEX03000782
EMBL:AAEX03000783 EMBL:AAEX03000784 EMBL:AAEX03000785
EMBL:AAEX03000786 RefSeq:XP_541477.2 Ensembl:ENSCAFT00000004749
GeneID:484361 KEGG:cfa:484361 Uniprot:F1PZW2
Length = 717
Score = 112 (44.5 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 31/120 (25%), Positives = 54/120 (45%)
Query: 21 MVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDR 80
M L G CP+ C C + + V+C + +P + V T+ L+L +N +
Sbjct: 43 MTLAAGGGSPPATSCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENGIQV 100
Query: 81 Y---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
TF+ L +L L LS N ++ + + + L L+L N + + +AF + KL
Sbjct: 101 IRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKL 160
Score = 98 (39.6 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 31/120 (25%), Positives = 51/120 (42%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CR TG+ + + W+ + ++ G
Sbjct: 351 IGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCR-TGTSMTSVNWLTPNGTL--MTHG 407
Query: 193 LANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVA 252
+ I ++ L VT+ D+G YTC N AG + +LNV V+ A
Sbjct: 408 SYRVR-----ISVLHD-GTLNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAA 461
Score = 98 (39.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + + F L +L L+L N++ VP+ + + +LREL L NPI+
Sbjct: 113 EILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIES 172
Query: 126 ITHEAFINVPKLNLED 141
I AF VP L D
Sbjct: 173 IPSYAFNRVPSLRRLD 188
Score = 69 (29.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 87 INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLN-LEDF 142
+N L+L N IQ + + + L L+LS N ++KI AF +P LN LE F
Sbjct: 86 VNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELF 142
Score = 65 (27.9 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
++R F L +L EL+LS+N + +P + + L + L+ NP
Sbjct: 268 IERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP 312
>ZFIN|ZDB-GENE-080327-25 [details] [associations]
symbol:lrrc4ba "leucine rich repeat containing 4Ba"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080327-25 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 KO:K16360
PANTHER:PTHR24369:SF7 EMBL:CR936968 IPI:IPI00774078
RefSeq:XP_684717.3 UniGene:Dr.114368 Ensembl:ENSDART00000076649
Ensembl:ENSDART00000150958 GeneID:556747 KEGG:dre:556747 CTD:556747
NextBio:20881642 Uniprot:F1QBH8
Length = 729
Score = 114 (45.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 29/106 (27%), Positives = 53/106 (50%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
CP+ C C + + V+C ++ +P+ + T+ L+L +N + TF+ L +L
Sbjct: 40 CPAVCSCSNQASR--VICARQHLEEVPDNISNNTRYLNLQENTIQVIKSDTFKHLRHLEI 97
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L LS NQI+ + + + L L+L N + + +AF + KL
Sbjct: 98 LQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTLVPSQAFEYLSKL 143
Score = 101 (40.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 28/76 (36%), Positives = 40/76 (52%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + + F L NL L+L N++ VPS + + +LREL L NPI+
Sbjct: 96 EILQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIET 155
Query: 126 ITHEAFINVPKLNLED 141
+ AF VP L D
Sbjct: 156 LPGYAFHRVPSLRRLD 171
Score = 95 (38.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 31/119 (26%), Positives = 49/119 (41%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CR TG+ + + WI + ++ G
Sbjct: 334 IGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCR-TGTSMTSVNWITPNGTL--MTHG 390
Query: 193 LANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAV 251
+ I ++ L VT+ D+G YTC N AG LNV + +V
Sbjct: 391 SYRVR-----ISVLHD-GTLNFTNVTLRDTGQYTCMVTNSAGNTTATAVLNVTAADVSV 443
Score = 72 (30.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
++R F L NL EL+LS+N + +P + + +L + L+ NP
Sbjct: 251 IERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNP 295
Score = 70 (29.7 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLN-LEDF 142
L+L N IQ + S + L L+LS N I++I AF +P LN LE F
Sbjct: 74 LNLQENTIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLNTLELF 125
Score = 68 (29.0 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 57 FTTIPE--QLDVGTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELR 114
F +P +LD+G ++ L +++ F LINL L+L ++ +P+ L ++ L
Sbjct: 161 FHRVPSLRRLDLG-ELKKL--DYISDAAFVGLINLRYLNLGMCGLKDIPN--LTPLVRLE 215
Query: 115 ELKLSGNPIQKITHEAFINVPKL 137
EL+LSGN ++ I +F + L
Sbjct: 216 ELELSGNRLEIIRPGSFQGLESL 238
>ZFIN|ZDB-GENE-040912-136 [details] [associations]
symbol:lingo1b "leucine rich repeat and Ig domain
containing 1b" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-040912-136 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
MEROPS:I43.001 EMBL:CU468744 EMBL:BX470207 EMBL:BC081651
IPI:IPI00483520 RefSeq:NP_001004576.1 UniGene:Dr.12903 HSSP:P21793
ProteinModelPortal:Q66HV9 SMR:Q66HV9 IntAct:Q66HV9 STRING:Q66HV9
Ensembl:ENSDART00000052113 GeneID:447837 KEGG:dre:447837 CTD:447837
eggNOG:NOG278536 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
InParanoid:Q66HV9 OMA:NISTIEA OrthoDB:EOG40S0F8 NextBio:20832358
Bgee:Q66HV9 Uniprot:Q66HV9
Length = 622
Score = 135 (52.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 36/131 (27%), Positives = 63/131 (48%)
Query: 16 WRVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSD 75
W+ +++++ T CPS CEC + + +V+C + T+PE + + T++LDLS
Sbjct: 25 WQPILILMLGTVLSGSATGCPSRCECSAQ--ERSVVCHRRKLITLPEGIPIDTRLLDLSK 82
Query: 76 NFLDRYTFRKLIN---LVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFI 132
N L + +N L +L L+ N I + ++L LR L L N ++ I F
Sbjct: 83 NRLKAINPEEFLNYPQLEDLQLNENIISVIEPGAFSNLLGLRTLGLRNNNLKLIQLGVFT 142
Query: 133 NVPKLNLEDFA 143
+ L D +
Sbjct: 143 GLSNLTRLDIS 153
Score = 70 (29.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 158 EENENVTLSCRATGSPVPKIKWIF-KEKIIANISSGLANMNKRQYIIKTINSLSNLTIVA 216
+E V C+A G P P I W K++ I S G +++ L +
Sbjct: 439 DEGTTVQFPCQADGDPTPMIMWQSPKKQFITTKSIGRLSVSLD----------GTLEVRY 488
Query: 217 VTMSDSGIYTCRAKNGAG 234
+ D+G YTC A N G
Sbjct: 489 AQIQDNGTYTCFAVNAGG 506
>MGI|MGI:3027390 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IDA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:3027390
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 HOVERGEN:HBG052359 KO:K16360 OMA:NNTTCCA
OrthoDB:EOG4W9J3K PANTHER:PTHR24369:SF7 EMBL:BC060263 EMBL:AK140418
IPI:IPI00381059 RefSeq:NP_937893.1 UniGene:Mm.44173 PDB:3ZYN
PDB:3ZYO PDBsum:3ZYN PDBsum:3ZYO ProteinModelPortal:P0C192
SMR:P0C192 IntAct:P0C192 STRING:P0C192 PhosphoSite:P0C192
PaxDb:P0C192 PRIDE:P0C192 Ensembl:ENSMUST00000058667 GeneID:272381
KEGG:mmu:272381 UCSC:uc009gpj.1 InParanoid:P0C192
EvolutionaryTrace:P0C192 NextBio:393574 Bgee:P0C192
CleanEx:MM_LRRC4B Genevestigator:P0C192
GermOnline:ENSMUSG00000047085 Uniprot:P0C192
Length = 709
Score = 110 (43.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 28/106 (26%), Positives = 51/106 (48%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
CP+ C C + + V+C + +P + V T+ L+L +N + TF+ L +L
Sbjct: 59 CPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKHLRHLEI 116
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L LS N ++ + + + L L+L N + + +AF + KL
Sbjct: 117 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKL 162
Score = 98 (39.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 31/120 (25%), Positives = 51/120 (42%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CR TG+ + + W+ + ++ G
Sbjct: 353 IGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCR-TGTSMTSVNWLTPNGTL--MTHG 409
Query: 193 LANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVA 252
+ I ++ L VT+ D+G YTC N AG + +LNV V+ A
Sbjct: 410 SYRVR-----ISVLHD-GTLNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAA 463
Score = 98 (39.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + + F L +L L+L N++ VP+ + + +LREL L NPI+
Sbjct: 115 EILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIES 174
Query: 126 ITHEAFINVPKLNLED 141
I AF VP L D
Sbjct: 175 IPSYAFNRVPSLRRLD 190
Score = 71 (30.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 87 INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLN-LEDF 142
+N L+L N IQ + + + L L+LS N ++KI AF +P LN LE F
Sbjct: 88 VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELF 144
Score = 65 (27.9 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
++R F L +L EL+LS+N + +P + + L + L+ NP
Sbjct: 270 IERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP 314
>RGD|1307121 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 RGD:1307121
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 KO:K16360 OMA:NNTTCCA OrthoDB:EOG4W9J3K
PANTHER:PTHR24369:SF7 EMBL:CB608563 IPI:IPI00367477
RefSeq:NP_001258010.1 RefSeq:XP_001077685.1 UniGene:Rn.22207
ProteinModelPortal:P0CC10 STRING:P0CC10 PRIDE:P0CC10
Ensembl:ENSRNOT00000026259 GeneID:308571 KEGG:rno:308571
UCSC:RGD:1307121 NextBio:659144 Uniprot:P0CC10
Length = 709
Score = 110 (43.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 28/106 (26%), Positives = 51/106 (48%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
CP+ C C + + V+C + +P + V T+ L+L +N + TF+ L +L
Sbjct: 59 CPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKHLRHLEI 116
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L LS N ++ + + + L L+L N + + +AF + KL
Sbjct: 117 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKL 162
Score = 98 (39.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 31/120 (25%), Positives = 51/120 (42%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CR TG+ + + W+ + ++ G
Sbjct: 353 IGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCR-TGTSMTSVNWLTPNGTL--MTHG 409
Query: 193 LANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVA 252
+ I ++ L VT+ D+G YTC N AG + +LNV V+ A
Sbjct: 410 SYRVR-----ISVLHD-GTLNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAA 463
Score = 98 (39.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + + F L +L L+L N++ VP+ + + +LREL L NPI+
Sbjct: 115 EILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIES 174
Query: 126 ITHEAFINVPKLNLED 141
I AF VP L D
Sbjct: 175 IPSYAFNRVPSLRRLD 190
Score = 71 (30.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 87 INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLN-LEDF 142
+N L+L N IQ + + + L L+LS N ++KI AF +P LN LE F
Sbjct: 88 VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELF 144
Score = 65 (27.9 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
++R F L +L EL+LS+N + +P + + L + L+ NP
Sbjct: 270 IERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP 314
>ZFIN|ZDB-GENE-080327-5 [details] [associations]
symbol:sc:d0316 "sc:d0316" species:7955 "Danio rerio"
[GO:0050770 "regulation of axonogenesis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-080327-5
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8 EMBL:CR388018
IPI:IPI00485297 RefSeq:XP_692888.2 UniGene:Dr.142090
Ensembl:ENSDART00000021605 GeneID:564462 KEGG:dre:564462 CTD:564462
NextBio:20885393 Bgee:F1QCU7 Uniprot:F1QCU7
Length = 631
Score = 119 (46.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD 79
+ +LV G ++ CPS C C + K V+C + +P+ + T+ L+L DN +
Sbjct: 34 LQLLVVAGLVRA-QTCPSVCSCSNQFSK--VICTRRGLKDVPDGVSTNTRYLNLQDNQIQ 90
Query: 80 RY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
+F+ L +L L LS N I+ + + + L L+L N + I + AF + K
Sbjct: 91 VIKVDSFKHLRHLEILQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTTIPNGAFEYLSK 150
Query: 137 L 137
L
Sbjct: 151 L 151
Score = 93 (37.8 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + F L +L L+L N++ +P+ + + +L+EL L NPI+
Sbjct: 104 EILQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIES 163
Query: 126 ITHEAFINVPKLNLED 141
I +AF +P L D
Sbjct: 164 IPSDAFSRLPSLRRLD 179
Score = 87 (35.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 34/118 (28%), Positives = 47/118 (39%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CR T S V + W+ I I+ G
Sbjct: 342 IGELDQSYFQCYAPVIIEPPVDLNLTEGMAAELKCR-TNS-VTSVSWLTPNGSI--ITHG 397
Query: 193 LANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETA 250
M I N L VT+ D+G YTC N G + LNV V+ +
Sbjct: 398 TLKMR-----INVQND-GTLNFTNVTLQDTGTYTCYVSNMLGNTSASAILNVTSVDNS 449
Score = 74 (31.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 22/84 (26%), Positives = 43/84 (51%)
Query: 51 LCKAKNFTTIPEQLDVGTQVLDLSDNFL---DRYTFRKLINLVELDLSYNQIQFVPSHIL 107
+C K I + L + L++S N L +F+ L++L +L + + Q+Q + +
Sbjct: 207 MCNLKEVPNI-QPL-IRLDELEMSGNQLTVIQPSSFKGLVHLQKLWMMHAQVQTIERNSF 264
Query: 108 DSILELRELKLSGNPIQKITHEAF 131
D + LREL L+ N + + H+ +
Sbjct: 265 DDLHSLRELNLAHNNLTFLPHDLY 288
Score = 74 (31.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 31/93 (33%), Positives = 47/93 (50%)
Query: 71 LDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHI---LDSI--LELRELK----L 118
L+L DN L F L L EL L N I+ +PS L S+ L+L ELK +
Sbjct: 130 LELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDLGELKRLSYI 189
Query: 119 SGNPIQKITHEAFINVPKLNLEDFACSPNIRPI 151
S Q +++ ++N+ NL++ PNI+P+
Sbjct: 190 SSGAFQGLSNLRYLNLGMCNLKEV---PNIQPL 219
>MGI|MGI:2182081 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2182081
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:AF300458 EMBL:DQ177325 EMBL:BC117834 IPI:IPI00169875
RefSeq:NP_619623.2 UniGene:Mm.443660 ProteinModelPortal:Q99PH1
SMR:Q99PH1 DIP:DIP-46449N STRING:Q99PH1 PhosphoSite:Q99PH1
PRIDE:Q99PH1 Ensembl:ENSMUST00000062304 GeneID:192198
KEGG:mmu:192198 UCSC:uc009bcu.1 InParanoid:Q149E5 NextBio:371238
Bgee:Q99PH1 CleanEx:MM_LRRC4 Genevestigator:Q99PH1
GermOnline:ENSMUSG00000049939 Uniprot:Q99PH1
Length = 652
Score = 109 (43.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 31/106 (29%), Positives = 50/106 (47%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRKLINLVE 91
CPS C C + K V+C + + +P+ + T+ L+L +N + TFR L +L
Sbjct: 45 CPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEV 102
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L L N I+ + + + L L+L N + I AF + KL
Sbjct: 103 LQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKL 148
Score = 98 (39.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 31/108 (28%), Positives = 44/108 (40%)
Query: 142 FACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQ 200
F CS P I D+ E+ L CR P+ +KW+ + + +S R
Sbjct: 347 FQCSAPFIMDAPRDLNISEDRMAELKCRTP--PMSSVKWLLPNGTVLSHAS-------RH 397
Query: 201 YIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVE 248
I +N L V + D+G+YTC N AG + LNV E
Sbjct: 398 PRISVLND-GTLNFSRVLLIDTGVYTCMVTNVAGNSNASAYLNVSSAE 444
Score = 91 (37.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
+VL L N + + F L +L L+L N + +PS + + +LREL L NPI+
Sbjct: 101 EVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIES 160
Query: 126 ITHEAFINVPKL 137
I AF VP L
Sbjct: 161 IPSYAFNRVPSL 172
Score = 74 (31.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 70 VLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
V++ + ++R F L +LVEL+L++N + +P + + L EL L NP
Sbjct: 248 VMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNP 300
>MGI|MGI:2444885 [details] [associations]
symbol:Lrit2 "leucine-rich repeat, immunoglobulin-like and
transmembrane domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 MGI:MGI:2444885 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HSSP:P07359 GeneTree:ENSGT00700000104028 CTD:340745
HOGENOM:HOG000082676 HOVERGEN:HBG060406 OrthoDB:EOG4X97H6
eggNOG:NOG331103 EMBL:BC057628 IPI:IPI00277844 RefSeq:NP_775594.1
UniGene:Mm.134302 ProteinModelPortal:Q6PFC5 SMR:Q6PFC5 PRIDE:Q6PFC5
Ensembl:ENSMUST00000057176 GeneID:239038 KEGG:mmu:239038
UCSC:uc007tbs.1 InParanoid:Q6PFC5 OMA:HIGPGIN NextBio:383967
Bgee:Q6PFC5 Genevestigator:Q6PFC5 Uniprot:Q6PFC5
Length = 549
Score = 105 (42.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 35/133 (26%), Positives = 62/133 (46%)
Query: 12 MIYEWRVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQL-DVGTQV 70
M + + ++ VLV V C C C + ++ C + + IP+ + QV
Sbjct: 1 MAFVFYCFLQVLVSWVIHAVQPFCLPECTCSEESFGRSLQCMSMSLGKIPDNFPEELKQV 60
Query: 71 -LDLSDNF-LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITH 128
++ S F L + F + +L L L++N + + L+ + ELREL+L GN ++ +
Sbjct: 61 RIENSPLFELSQGFFTNMSSLEYLWLNFNNVTVIHLGALEDLPELRELRLEGNKLRSVPW 120
Query: 129 EAFINVPKLNLED 141
AF P L + D
Sbjct: 121 TAFRATPLLRVLD 133
Score = 100 (40.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 37/117 (31%), Positives = 52/117 (44%)
Query: 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT 205
P I + +VT + +NVTL C A SP P I W + LA+ I
Sbjct: 253 PTISTPSVNVTIQVGKNVTLQCFAQASPSPTIAWKYPLSTWREFDV-LASPIAEGII--- 308
Query: 206 INSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVAS 262
LS L I A + D G YTC A N G +++ + ++ V+ A A P +L S
Sbjct: 309 ---LSQLVIPAAQLVDGGNYTCMAFNSIGR--SSLVI-LLYVQPAQAMPGLHFLSTS 359
>UNIPROTKB|I3LDA4 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0020037 "heme binding" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0004601
"peroxidase activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006979 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10
GeneTree:ENSGT00550000074325 CTD:7837 OMA:EPVITWN EMBL:FP102546
EMBL:FP565715 RefSeq:XP_003125453.3 Ensembl:ENSSSCT00000022979
GeneID:100516076 KEGG:ssc:100516076 Uniprot:I3LDA4
Length = 1479
Score = 112 (44.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 40/126 (31%), Positives = 58/126 (46%)
Query: 20 IMVLVCTGCLQVFAE-----CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
+++ C G L V A+ CPS C C + TV C +P + T +LDL
Sbjct: 16 LVMCCCWGVLAVVAQKPGNGCPSRCLCF----RTTVRCMHLLLEAVPA-VAPQTSILDLR 70
Query: 75 DNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
N + F+ L NL L L+ NQI+ +PS + + L+ L L N IQ I +AF
Sbjct: 71 FNRIREIQPGAFKGLRNLNTLLLNNNQIKSIPSGSFEDLENLKYLYLYKNEIQSIDRQAF 130
Query: 132 INVPKL 137
+ L
Sbjct: 131 QGLASL 136
Score = 102 (41.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 34/125 (27%), Positives = 55/125 (44%)
Query: 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK 204
+P + DVTAE +V L C + G P P I W K+ + SG +++ +
Sbjct: 524 TPVFASVPSDVTAEVGSSVQLPCSSQGEPEPAITWN-KDGVQVT-ESGKFHISPEGF--- 578
Query: 205 TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLT 264
LTI V +D+G Y C A+N G+ ++ L+V V DP + +
Sbjct: 579 -------LTIHDVGTADAGRYECVARNTMGQASVSMLLSV-NVPDVSRNGDPFVATSIVE 630
Query: 265 TVVTI 269
+ T+
Sbjct: 631 AIATV 635
Score = 94 (38.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 29/107 (27%), Positives = 44/107 (41%)
Query: 133 NVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISS 191
+V + E+ C P I D V +CRA G+P P+I W+ ++ +
Sbjct: 232 SVATITPEELDCERPRITSEPQDADVTLGNTVFFTCRAEGNPKPEIIWLRNNNELSMAAD 291
Query: 192 GLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFT 238
N+ ++ L I +D G+Y C AKN AGE T
Sbjct: 292 SRLNL---------LDD-GTLMIQNTREADQGVYQCMAKNVAGEAKT 328
Score = 85 (35.0 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 40/151 (26%), Positives = 59/151 (39%)
Query: 119 SGNPIQKITHEAFINVPKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIK 178
+ N + + AFI V L F +P R +T E + V C A G P P I
Sbjct: 414 AANTVDSVHATAFIIVQAL--PQFTVTPQDRAVT------EGQTVDFHCEAKGYPQPVIA 465
Query: 179 WIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFT 238
W S L+ +++R ++ S L I +V + D G Y C+A N G
Sbjct: 466 W-------TKGGSPLS-VDRRHLVL----SSGTLRISSVALHDQGQYECQAVNIIGSQRV 513
Query: 239 NISLNVIKVETAVAQPDPVYLVASLTTVVTI 269
L V T V P + A + + V +
Sbjct: 514 TAHLTVQARVTPVFASVPSDVTAEVGSSVQL 544
Score = 80 (33.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 28/89 (31%), Positives = 36/89 (40%)
Query: 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTIN 207
I+P +V E+VTL C ATG P P+I W + + ++ I
Sbjct: 346 IQPQNTEVLV--GESVTLECSATGHPPPRITWTRGDGTPVPVDPRVS-----------IT 392
Query: 208 SLSNLTIVAVTMSDSGIYTCRAKNGAGEV 236
L I V DSG YTC A N V
Sbjct: 393 PSGGLYIQNVVQEDSGEYTCFAANTVDSV 421
Score = 74 (31.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 82 TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
+F L NL L L N+IQ + + L +L L N I+ + E+F ++PKL
Sbjct: 105 SFEDLENLKYLYLYKNEIQSIDRQAFQGLASLEQLYLHFNQIETLDPESFQHLPKL 160
>ZFIN|ZDB-GENE-060503-496 [details] [associations]
symbol:lrrc24 "leucine rich repeat containing 24"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-060503-496
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:441381 EMBL:BX000489
IPI:IPI00876679 RefSeq:XP_694151.2 UniGene:Dr.141919
Ensembl:ENSDART00000114047 GeneID:565790 KEGG:dre:565790
NextBio:20887101 Bgee:F1QV37 Uniprot:F1QV37
Length = 594
Score = 115 (45.5 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 37/123 (30%), Positives = 54/123 (43%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD 79
++VL+ CPS C C TV C + IP+ + GTQ + L DN +
Sbjct: 9 VLVLMLAQLCSTSLACPSGCRCY----SLTVECGSIGIKEIPQGITQGTQTIFLQDNAIG 64
Query: 80 RYTFRKLINLVELDLSY---NQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
+ R L +L +L Y N I + S+ L EL L+GN I IT + F +
Sbjct: 65 QIRQRDLSDLGQLHYLYLQNNSISTLEPGAFRSLGLLLELALNGNRIHLITADVFRGLDH 124
Query: 137 LNL 139
L +
Sbjct: 125 LRI 127
Score = 82 (33.9 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 125 KITHEAFINVPKLNLEDFACSPNIRPITPD-VTAEENENVTLSCRATGSPVPKIKW 179
+++H + + VP +L C P + + P +T E++ +SC+A+G P P++ W
Sbjct: 242 RLSHLSLVEVPPNSL---VCIPPVVQLEPSHLTVRLGESLRVSCQASGYPQPQVTW 294
Score = 46 (21.3 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 217 VTMSDSGIYTCRAKN--GAGEVFTNISLNV 244
VT++ +G Y C A N G V ++S+N+
Sbjct: 369 VTVAHAGRYECEAWNPGGVARVTFHLSVNM 398
>UNIPROTKB|E1BPK8 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360 OMA:NNTTCCA
PANTHER:PTHR24369:SF7 EMBL:DAAA02047507 IPI:IPI00733296
RefSeq:NP_001179210.1 UniGene:Bt.88262 ProteinModelPortal:E1BPK8
Ensembl:ENSBTAT00000043330 GeneID:539607 KEGG:bta:539607
NextBio:20878103 ArrayExpress:E1BPK8 Uniprot:E1BPK8
Length = 711
Score = 109 (43.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 28/106 (26%), Positives = 51/106 (48%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
CP+ C C + + V+C + +P + V T+ L+L +N + TF+ L +L
Sbjct: 57 CPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEI 114
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L LS N ++ + + + L L+L N + + +AF + KL
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKL 160
Score = 98 (39.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 31/120 (25%), Positives = 51/120 (42%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CR TG+ + + W+ + ++ G
Sbjct: 351 IGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCR-TGTSMTSVNWLTPNGTL--MTHG 407
Query: 193 LANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVA 252
+ I ++ L VT+ D+G YTC N AG + +LNV V+ A
Sbjct: 408 SYRVR-----ISVLHD-GTLNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAA 461
Score = 98 (39.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + + F L +L L+L N++ VP+ + + +LREL L NPI+
Sbjct: 113 EILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIES 172
Query: 126 ITHEAFINVPKLNLED 141
I AF VP L D
Sbjct: 173 IPSYAFNRVPSLRRLD 188
Score = 69 (29.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 87 INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLN-LEDF 142
+N L+L N IQ + + + L L+LS N ++KI AF +P LN LE F
Sbjct: 86 VNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELF 142
Score = 65 (27.9 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
++R F L +L EL+LS+N + +P + + L + L+ NP
Sbjct: 268 IERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP 312
>UNIPROTKB|I3LJI7 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:NNTTCCA PANTHER:PTHR24369:SF7
EMBL:FP102476 EMBL:FP102472 Ensembl:ENSSSCT00000029477
Uniprot:I3LJI7
Length = 721
Score = 109 (43.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 28/106 (26%), Positives = 51/106 (48%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
CP+ C C + + V+C + +P + V T+ L+L +N + TF+ L +L
Sbjct: 57 CPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEI 114
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L LS N ++ + + + L L+L N + + +AF + KL
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKL 160
Score = 98 (39.6 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 31/120 (25%), Positives = 51/120 (42%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CR TG+ + + W+ + ++ G
Sbjct: 351 IGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCR-TGTSMTSVNWLTPNGTL--MTHG 407
Query: 193 LANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVA 252
+ I ++ L VT+ D+G YTC N AG + +LNV V+ A
Sbjct: 408 SYRVR-----ISVLHD-GTLNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAA 461
Score = 98 (39.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + + F L +L L+L N++ VP+ + + +LREL L NPI+
Sbjct: 113 EILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIES 172
Query: 126 ITHEAFINVPKLNLED 141
I AF VP L D
Sbjct: 173 IPSYAFNRVPSLRRLD 188
Score = 69 (29.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 87 INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLN-LEDF 142
+N L+L N IQ + + + L L+LS N ++KI AF +P LN LE F
Sbjct: 86 VNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELF 142
Score = 65 (27.9 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
++R F L +L EL+LS+N + +P + + L + L+ NP
Sbjct: 268 IERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP 312
>RGD|1560026 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1560026 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:DQ119102 IPI:IPI00197050 RefSeq:NP_001032413.1
UniGene:Rn.198672 ProteinModelPortal:Q45R42 SMR:Q45R42 PRIDE:Q45R42
Ensembl:ENSRNOT00000010673 GeneID:641521 KEGG:rno:641521
UCSC:RGD:1560026 InParanoid:Q45R42 NextBio:714703
Genevestigator:Q45R42 Uniprot:Q45R42
Length = 652
Score = 108 (43.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 31/106 (29%), Positives = 50/106 (47%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRKLINLVE 91
CPS C C + K V+C + + +P+ + T+ L+L +N + TFR L +L
Sbjct: 45 CPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEV 102
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L L N I+ + + + L L+L N + I AF + KL
Sbjct: 103 LQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKL 148
Score = 98 (39.6 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 31/108 (28%), Positives = 44/108 (40%)
Query: 142 FACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQ 200
F CS P I D+ E+ L CR P+ +KW+ + + +S R
Sbjct: 347 FQCSAPFIMDAPRDLNISEDRMAELKCRTP--PMSSVKWLLPNGTVLSHAS-------RH 397
Query: 201 YIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVE 248
I +N L V + D+G+YTC N AG + LNV E
Sbjct: 398 PRISVLND-GTLNFSRVLLIDTGVYTCMVTNVAGNSNASAYLNVSSAE 444
Score = 91 (37.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
+VL L N + + F L +L L+L N + +PS + + +LREL L NPI+
Sbjct: 101 EVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIES 160
Query: 126 ITHEAFINVPKL 137
I AF VP L
Sbjct: 161 IPSYAFNRVPSL 172
Score = 74 (31.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 70 VLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
V++ + ++R F L +LVEL+L++N + +P + + L EL L NP
Sbjct: 248 VMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNP 300
>WB|WBGene00004256 [details] [associations]
symbol:pxn-1 species:6239 "Caenorhabditis elegans"
[GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF03098 PRINTS:PR00457
PROSITE:PS00436 PROSITE:PS50292 PROSITE:PS50835 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483 SMART:SM00082
GO:GO:0020037 GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0042744
SUPFAM:SSF48113 PROSITE:PS00435 Gene3D:1.10.640.10 eggNOG:NOG262194
GeneTree:ENSGT00550000074325 HOGENOM:HOG000016084 EMBL:FO081391
RefSeq:NP_505188.3 UniGene:Cel.1260 ProteinModelPortal:Q1ENI8
SMR:Q1ENI8 PeroxiBase:3359 PaxDb:Q1ENI8 EnsemblMetazoa:ZK994.3
GeneID:191484 KEGG:cel:CELE_ZK994.3 UCSC:ZK994.3 CTD:191484
WormBase:ZK994.3 InParanoid:Q1ENI8 OMA:GGIVEEK NextBio:949320
Uniprot:Q1ENI8
Length = 1285
Score = 117 (46.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 18 VYIMVLV-CTGCLQVFA--ECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
+Y+++LV T Q A ECP C C KG V C + T IP+ + + L +
Sbjct: 3 LYLLLLVIATSSWQFVAGLECPVECTCDKKG--LVVDCSSSGLTRIPKNISRNVRSLVIR 60
Query: 75 DNFLDRYTFRKL--INLVE-LDLSYNQIQFVPSHILDSILELRELKLSGNPI 123
+N + + L N +E L L++N+I+ + ++LD + EL+ L L+ N +
Sbjct: 61 NNRIHKLKRSDLEGFNQLETLVLTHNKIKIIEENVLDHLPELKRLSLAHNEL 112
Score = 95 (38.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 34/101 (33%), Positives = 44/101 (43%)
Query: 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK 204
SP D + E V ++C G+P P I W K ISS KRQ +
Sbjct: 314 SPQFTYKPRDNSFREGSEVKVNCEVMGNPKPTINWYHNGKRF--ISS-----RKRQLGLS 366
Query: 205 TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVI 245
N++ L I DSG YTC A N G+V SL++I
Sbjct: 367 --NNV--LRIYPFLEEDSGRYTCEAVNSVGKVRHAFSLDLI 403
Score = 79 (32.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 89 LVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLN 138
L L+L N IQF+ +L +L +L S N IQ + + F N+P L+
Sbjct: 125 LASLNLKRNHIQFIDEQVLRYFPDLTQLDFSHNRIQSLRTKLFDNLPALS 174
Score = 73 (30.8 bits), Expect = 0.00081, Sum P(2) = 0.00080
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 77 FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
F+D R +L +LD S+N+IQ + + + D++ L L NP
Sbjct: 137 FIDEQVLRYFPDLTQLDFSHNRIQSLRTKLFDNLPALSHAHLHSNP 182
>UNIPROTKB|E1C0J7 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 EMBL:AADN02019209
IPI:IPI00576786 ProteinModelPortal:E1C0J7
Ensembl:ENSGALT00000009463 Uniprot:E1C0J7
Length = 1411
Score = 108 (43.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 39/143 (27%), Positives = 68/143 (47%)
Query: 132 INVPKLNLEDFACSPNIRPI---TP-DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIA 187
I V L ++ A +P + P+ P DV AE ++V ++C A G P P I W+ KE I
Sbjct: 497 IGVRTLPVQ-LAVTPRVIPVFLHPPQDVVAETGQDVAITCAAQGDPRPTITWV-KEGIQI 554
Query: 188 NISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKV 247
SG ++++ L+I + ++D G Y C A+N G FT+ ++ +
Sbjct: 555 T-ESGKFHVSQD----------GTLSIQDLGVADQGRYECIARNPFG--FTSSAMQLTIT 601
Query: 248 ETAVAQPDPVYLVASLTTVVTII 270
T V + ++ SL ++ +
Sbjct: 602 ATDVGRSGDTFVATSLREAISSV 624
Score = 105 (42.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 34/100 (34%), Positives = 46/100 (46%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
CP C C + TV C TIP+ + T +LDL N + FR+L NL
Sbjct: 24 CPPRCLCF----RTTVRCMHLMLETIPD-IPPQTSILDLRFNHIREIQPGAFRRLKNLNT 78
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
L L+ NQI+ + + + L+ L L N IQ I AF
Sbjct: 79 LLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAF 118
Score = 103 (41.3 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 133 NVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISS 191
++ L ++F C P I DV V +CRA G+P P I W+ I
Sbjct: 220 SIVTLTAQEFNCERPRITSEPHDVDVLLGNTVYFTCRAEGNPKPAIIWLHNNNEI----- 274
Query: 192 GLANMNKRQYIIKTINSLSNLTIVAVTM--SDSGIYTCRAKNGAGEVFT 238
+ + N+ +N L + T++ SD G+Y C AKN AGEV T
Sbjct: 275 DMKDDNR-------LNLLQDGTLMIQNTKESDKGVYQCMAKNIAGEVKT 316
Score = 93 (37.8 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 35/129 (27%), Positives = 47/129 (36%)
Query: 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK 204
SP + D T E ++V C A G P P I W + G N+R I+
Sbjct: 420 SPRFLLVPTDQTVTEGQSVDFPCTAEGHPPPVIAW-------TRAAGGPLPSNRRHSILS 472
Query: 205 TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLT 264
T L ++ V + D G Y C A + G + L V V P +VA
Sbjct: 473 T----GTLRVMRVALHDQGQYECHAISAIGVRTLPVQLAVTPRVIPVFLHPPQDVVAETG 528
Query: 265 TVVTIILTA 273
V I A
Sbjct: 529 QDVAITCAA 537
Score = 90 (36.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 28/89 (31%), Positives = 38/89 (42%)
Query: 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTIN 207
I+P +V E+VTL C +G P P+I W + +G ++ I
Sbjct: 334 IQPQNTEVLV--GESVTLECGVSGHPHPRISW--------TLGTGSPLPQDPRF---AIT 380
Query: 208 SLSNLTIVAVTMSDSGIYTCRAKNGAGEV 236
S L I VT SD G Y C A N G +
Sbjct: 381 SSGGLFIQNVTFSDQGQYNCNASNTEGSI 409
Score = 82 (33.9 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 80 RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
R +F L NL L L N+IQ + H + L +L L N ++ + E F ++PKL
Sbjct: 91 RRSFEDLENLKYLYLYKNEIQSIQQHAFHGLRSLEQLYLHFNSLETLEPETFSDLPKL 148
>UNIPROTKB|E1C0J1 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 OMA:GGRYECQ
EMBL:AADN02019209 IPI:IPI00599639 ProteinModelPortal:E1C0J1
Ensembl:ENSGALT00000009466 Uniprot:E1C0J1
Length = 1424
Score = 108 (43.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 39/143 (27%), Positives = 68/143 (47%)
Query: 132 INVPKLNLEDFACSPNIRPI---TP-DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIA 187
I V L ++ A +P + P+ P DV AE ++V ++C A G P P I W+ KE I
Sbjct: 497 IGVRTLPVQ-LAVTPRVIPVFLHPPQDVVAETGQDVAITCAAQGDPRPTITWV-KEGIQI 554
Query: 188 NISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKV 247
SG ++++ L+I + ++D G Y C A+N G FT+ ++ +
Sbjct: 555 T-ESGKFHVSQD----------GTLSIQDLGVADQGRYECIARNPFG--FTSSAMQLTIT 601
Query: 248 ETAVAQPDPVYLVASLTTVVTII 270
T V + ++ SL ++ +
Sbjct: 602 ATDVGRSGDTFVATSLREAISSV 624
Score = 105 (42.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 34/100 (34%), Positives = 46/100 (46%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
CP C C + TV C TIP+ + T +LDL N + FR+L NL
Sbjct: 24 CPPRCLCF----RTTVRCMHLMLETIPD-IPPQTSILDLRFNHIREIQPGAFRRLKNLNT 78
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
L L+ NQI+ + + + L+ L L N IQ I AF
Sbjct: 79 LLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAF 118
Score = 103 (41.3 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 133 NVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISS 191
++ L ++F C P I DV V +CRA G+P P I W+ I
Sbjct: 220 SIVTLTAQEFNCERPRITSEPHDVDVLLGNTVYFTCRAEGNPKPAIIWLHNNNEI----- 274
Query: 192 GLANMNKRQYIIKTINSLSNLTIVAVTM--SDSGIYTCRAKNGAGEVFT 238
+ + N+ +N L + T++ SD G+Y C AKN AGEV T
Sbjct: 275 DMKDDNR-------LNLLQDGTLMIQNTKESDKGVYQCMAKNIAGEVKT 316
Score = 93 (37.8 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 35/129 (27%), Positives = 47/129 (36%)
Query: 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK 204
SP + D T E ++V C A G P P I W + G N+R I+
Sbjct: 420 SPRFLLVPTDQTVTEGQSVDFPCTAEGHPPPVIAW-------TRAAGGPLPSNRRHSILS 472
Query: 205 TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLT 264
T L ++ V + D G Y C A + G + L V V P +VA
Sbjct: 473 T----GTLRVMRVALHDQGQYECHAISAIGVRTLPVQLAVTPRVIPVFLHPPQDVVAETG 528
Query: 265 TVVTIILTA 273
V I A
Sbjct: 529 QDVAITCAA 537
Score = 90 (36.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 28/89 (31%), Positives = 38/89 (42%)
Query: 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTIN 207
I+P +V E+VTL C +G P P+I W + +G ++ I
Sbjct: 334 IQPQNTEVLV--GESVTLECGVSGHPHPRISW--------TLGTGSPLPQDPRF---AIT 380
Query: 208 SLSNLTIVAVTMSDSGIYTCRAKNGAGEV 236
S L I VT SD G Y C A N G +
Sbjct: 381 SSGGLFIQNVTFSDQGQYNCNASNTEGSI 409
Score = 82 (33.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 80 RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
R +F L NL L L N+IQ + H + L +L L N ++ + E F ++PKL
Sbjct: 91 RRSFEDLENLKYLYLYKNEIQSIQQHAFHGLRSLEQLYLHFNSLETLEPETFSDLPKL 148
>UNIPROTKB|Q9NT99 [details] [associations]
symbol:LRRC4B "Leucine-rich repeat-containing protein 4B"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0051965 "positive regulation of synapse
assembly" evidence=ISS] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042734
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AC008743 InterPro:IPR026906
Pfam:PF13306 EMBL:BC019687 EMBL:BC056207 EMBL:AL137451
IPI:IPI00300241 PIR:T46266 RefSeq:NP_001073926.1 UniGene:Hs.120873
ProteinModelPortal:Q9NT99 SMR:Q9NT99 STRING:Q9NT99
PhosphoSite:Q9NT99 DMDM:91207142 PaxDb:Q9NT99 PRIDE:Q9NT99
DNASU:94030 Ensembl:ENST00000389201 GeneID:94030 KEGG:hsa:94030
UCSC:uc002pss.3 CTD:94030 GeneCards:GC19M051020 H-InvDB:HIX0015363
HGNC:HGNC:25042 neXtProt:NX_Q9NT99 PharmGKB:PA134890612
HOGENOM:HOG000252924 HOVERGEN:HBG052359 InParanoid:Q9NT99 KO:K16360
OMA:NNTTCCA OrthoDB:EOG4W9J3K ChiTaRS:LRRC4B GenomeRNAi:94030
NextBio:78327 ArrayExpress:Q9NT99 Bgee:Q9NT99 CleanEx:HS_LRRC4B
Genevestigator:Q9NT99 GermOnline:ENSG00000131409
PANTHER:PTHR24369:SF7 Uniprot:Q9NT99
Length = 713
Score = 107 (42.7 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 28/106 (26%), Positives = 51/106 (48%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
CP C C + + V+C ++ +P + V T+ L+L +N + TF+ L +L
Sbjct: 57 CPVACSCSNQASR--VICTRRDLAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEI 114
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L LS N ++ + + + L L+L N + + +AF + KL
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKL 160
Score = 98 (39.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 31/120 (25%), Positives = 51/120 (42%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ +L+ F C +P I D+ E L CR TG+ + + W+ + ++ G
Sbjct: 351 IGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCR-TGTSMTSVNWLTPNGTL--MTHG 407
Query: 193 LANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVA 252
+ I ++ L VT+ D+G YTC N AG + +LNV V+ A
Sbjct: 408 SYRVR-----ISVLHD-GTLNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAA 461
Score = 98 (39.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L LS N + + F L +L L+L N++ VP+ + + +LREL L NPI+
Sbjct: 113 EILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIES 172
Query: 126 ITHEAFINVPKLNLED 141
I AF VP L D
Sbjct: 173 IPSYAFNRVPSLRRLD 188
Score = 69 (29.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 87 INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLN-LEDF 142
+N L+L N IQ + + + L L+LS N ++KI AF +P LN LE F
Sbjct: 86 VNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELF 142
Score = 65 (27.9 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
++R F L +L EL+LS+N + +P + + L + L+ NP
Sbjct: 268 IERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP 312
>UNIPROTKB|H3BQ49 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0005154 "epidermal growth factor receptor
binding" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] InterPro:IPR003591
SMART:SM00369 GO:GO:0043491 GO:GO:0031175 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715 HGNC:HGNC:21205
EMBL:AC046168 EMBL:AC105133 EMBL:AC110607 Ensembl:ENST00000561686
Bgee:H3BQ49 Uniprot:H3BQ49
Length = 179
Score = 133 (51.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 16 WRVYIMVLVCTGCLQVFAE-CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
W+ I++LV L A CP CEC + VLC K F +PE + T++LDL
Sbjct: 17 WQP-ILLLVLGSVLSGSATGCPPRCECSAQD--RAVLCHRKRFVAVPEGIPTETRLLDLG 73
Query: 75 DN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
N L++ F +L EL+L+ N + V +++ LR L L N ++ I F
Sbjct: 74 KNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVF 133
Query: 132 I---NVPKLNLED 141
N+ KL++ +
Sbjct: 134 TGLSNLTKLDISE 146
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 115 (45.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 39/152 (25%), Positives = 70/152 (46%)
Query: 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK 204
+P++ D E V C+ATGSP P+I W+ + ++ + +R +
Sbjct: 694 TPSLAVPLEDRVVTVGETVAFQCKATGSPTPRITWLKGGRPLS--------LTERHHFTP 745
Query: 205 TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYL-VASL 263
N L L + V + D+G YTC N G + L+++ T + D + + ++
Sbjct: 746 G-NQL--LVVQNVMIDDAGRYTCEMSNPLGTERAHSQLSILP--TPGCRKDGTTVGIFTI 800
Query: 264 TTVVTIILTACFVVLCIIL-LKAKRKRYADVN 294
V +I+LT+ V +CII + K + Y+ N
Sbjct: 801 AVVCSIVLTS-LVWVCIIYQTRKKSEEYSVTN 831
Score = 110 (43.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT 205
P+ I D+ L C ATG P P+I W +K + A +R +++
Sbjct: 601 PSFTKIPHDIAIRTGTTARLECAATGHPNPQIAW---QK--DGGTDFPAARERRMHVMPD 655
Query: 206 INSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVET-AVAQPDPVYLV 260
+ + +T V + D G+Y+C A+N AG V N +L V++ + AV D V V
Sbjct: 656 -DDVFFITDVKI--DDMGVYSCTAQNSAGSVSANATLTVLETPSLAVPLEDRVVTV 708
Score = 93 (37.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 37/122 (30%), Positives = 55/122 (45%)
Query: 33 AECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFL---DRYTFRKLINL 89
A C + C C G +++ C + T+P L T+ L+LS N L D F L NL
Sbjct: 41 APCAAACTC---AG-DSLDCSGRGLATLPRDLPSWTRSLNLSYNRLSEIDSAAFEDLTNL 96
Query: 90 VELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNIR 149
E+ L+ N++ +PS SI + L L N I + + L + D + S NI
Sbjct: 97 QEVYLNSNELTAIPSLGAASI-GVVSLFLQHNKILSVDGSQLKSYLSLEVLDLS-SNNIT 154
Query: 150 PI 151
I
Sbjct: 155 EI 156
Score = 75 (31.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 71 LDLSDNFLDRYTFR--KLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITH 128
L LS N + + + KL L +LDL+ N+I+ + + L L+L N I ++T
Sbjct: 195 LRLSKNRITQLPVKAFKLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTD 254
Query: 129 EAFINVPKLNL 139
AF + K+++
Sbjct: 255 GAFWGLSKMHV 265
Score = 72 (30.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 69 QVLDLSDNFLDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILE-LRELKLSGNPIQ 124
+VLDLS N + F + + EL+L+ N+I + S D + L L+LS N I
Sbjct: 144 EVLDLSSNNITEIRSSCFPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRIT 203
Query: 125 KITHEAFINVPKLNLED 141
++ +AF +P+L D
Sbjct: 204 QLPVKAF-KLPRLTQLD 219
Score = 72 (30.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 26/89 (29%), Positives = 38/89 (42%)
Query: 48 ETVLCKAKNFTTIPE--QLDVGTQVLDLSDNFL---DRYTFRKLINLVELDLSYNQIQFV 102
+ V + T IP +G L L N + D + ++L LDLS N I +
Sbjct: 97 QEVYLNSNELTAIPSLGAASIGVVSLFLQHNKILSVDGSQLKSYLSLEVLDLSSNNITEI 156
Query: 103 PSHILDSILELRELKLSGNPIQKITHEAF 131
S + L +REL L+ N I + AF
Sbjct: 157 RSSCFPNGLRIRELNLASNRISILESGAF 185
Score = 69 (29.3 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFI---NVPKLNL 139
F L NL +L L N+I+ V + L L L N I+ + +AF N+ +L +
Sbjct: 380 FTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAIRSVQFDAFAKMKNLKELYI 439
Query: 140 --EDFACSPNIRPITP 153
E F C ++ + P
Sbjct: 440 SSESFLCDCQLKWLPP 455
Score = 68 (29.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 24/73 (32%), Positives = 34/73 (46%)
Query: 69 QVLDLSDNFLDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
+VL L N + R T F L + L L YN + V S L + L +L LS N I +
Sbjct: 240 EVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISR 299
Query: 126 ITHEAFINVPKLN 138
I + + KL+
Sbjct: 300 IQRDGWSFCQKLH 312
Score = 67 (28.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 22/56 (39%), Positives = 28/56 (50%)
Query: 87 INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFIN---VPKLNL 139
I +V L L +N+I V L S L L L LS N I +I F N + +LNL
Sbjct: 117 IGVVSLFLQHNKILSVDGSQLKSYLSLEVLDLSSNNITEIRSSCFPNGLRIRELNL 172
>UNIPROTKB|F1PKU2 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0020037 "heme binding" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0004601 "peroxidase activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 SUPFAM:SSF48113
Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325 OMA:EFRYNDL
EMBL:AAEX03015771 EMBL:AAEX03015772 EMBL:AAEX03015773
Ensembl:ENSCAFT00000010829 Uniprot:F1PKU2
Length = 1429
Score = 120 (47.3 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 41/138 (29%), Positives = 63/138 (45%)
Query: 133 NVPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISS 191
++ L +E+F C SP I DV V +CRA G+P P+I WI N S
Sbjct: 181 SIASLTVEEFNCESPRITYEPQDVEVTSGNTVYFTCRAEGNPKPEIIWIHN-----NHSL 235
Query: 192 GLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAV 251
L + ++ + + L I SD G Y C A+N AGEV T ++ ++ +
Sbjct: 236 DLEDDHR----LNLFDD-GTLMIRNTRESDQGEYQCMARNSAGEVKTQNAM--LRYSSPP 288
Query: 252 AQPDPVYLVASLTTVVTI 269
A+P +++ T V I
Sbjct: 289 AKPS--FIIQPQDTEVLI 304
Score = 101 (40.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 30/110 (27%), Positives = 48/110 (43%)
Query: 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT 205
P + + D + E +N+ +SC A G P P I W N +G+ ++
Sbjct: 472 PVLTQLPQDTSVEVGKNINISCHAEGEPQPIITW--------N-KAGVQITESGKF---H 519
Query: 206 INSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPD 255
++ LTI +D G Y C A+N G V N+ L V+ ++ A D
Sbjct: 520 VSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDD 569
Score = 90 (36.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
LD+ TF+ LI+L +L + +NQI+ + +L+L L L N + KI +F ++ L
Sbjct: 74 LDKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSL 133
Score = 66 (28.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 90 VELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
V DL +N+I+ +P + L L L+ N I++I+ AF + L
Sbjct: 14 VHRDLRFNRIREIPESAFKKLKTLNTLLLNNNQIRQISRNAFEGLENL 61
Score = 63 (27.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
+ R F L NL+ L L N+I+ + ++ L +L + N I+ + E F ++ KL
Sbjct: 50 ISRNAFEGLENLLYLYLYKNEIRALDKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKL 109
Score = 51 (23.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 82 TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPI 123
TF L+ L L L N++ +P+ + L+ L+L N +
Sbjct: 102 TFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSNAL 143
Score = 51 (23.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
F+KL L L L+ NQI+ + + + + L L L N I+ + + F
Sbjct: 31 FKKLKTLNTLLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRALDKQTF 79
>UNIPROTKB|A1KZ92 [details] [associations]
symbol:PXDNL "Peroxidasin-like protein" species:9606 "Homo
sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004601 "peroxidase activity"
evidence=ISS] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=ISS] [GO:0020037 "heme binding" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] [GO:0005615
"extracellular space" evidence=ISS] InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
GO:GO:0005737 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0090305 GO:GO:0004601 GO:GO:0004519 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0042744
SUPFAM:SSF48113 PROSITE:PS00435 EMBL:CH471068 MEROPS:I43.001
Gene3D:1.10.640.10 eggNOG:NOG262194 HOGENOM:HOG000016084
EMBL:AC090186 EMBL:EU170240 EMBL:AY877349 EMBL:AC103958
EMBL:AC107374 EMBL:AC011128 EMBL:AC012413 EMBL:AK058200
EMBL:AK131524 IPI:IPI00065049 IPI:IPI00890814 RefSeq:NP_653252.3
UniGene:Hs.444882 ProteinModelPortal:A1KZ92 SMR:A1KZ92
PeroxiBase:5398 PeroxiBase:5827 PhosphoSite:A1KZ92 PRIDE:A1KZ92
Ensembl:ENST00000356297 Ensembl:ENST00000543296 GeneID:137902
KEGG:hsa:137902 UCSC:uc003xqu.4 CTD:137902 GeneCards:GC08M052232
HGNC:HGNC:26359 HPA:HPA007919 neXtProt:NX_A1KZ92
PharmGKB:PA142671110 HOVERGEN:HBG108312 OMA:EFRYNDL
OrthoDB:EOG4HDSSN GenomeRNAi:137902 NextBio:83705 Bgee:A1KZ92
CleanEx:HS_PXDNL Genevestigator:A1KZ92 Uniprot:A1KZ92
Length = 1463
Score = 119 (46.9 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 42/139 (30%), Positives = 62/139 (44%)
Query: 134 VPKLNLEDFAC-SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
V + +E+F C SP I DV V +CRA G+P P+I WI N S
Sbjct: 221 VASVTVEEFNCQSPRITFEPQDVEVPSGNTVYFTCRAEGNPKPEIIWIHN-----NHSLD 275
Query: 193 LANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISL----NVIKVE 248
L + + + + L I SD G+Y C A+N AGE T ++ ++
Sbjct: 276 LEDDTR----LNVFDD-GTLMIRNTRESDQGVYQCMARNSAGEAKTQSAMLRYSSLPAKP 330
Query: 249 TAVAQP-DPVYLVASLTTV 266
+ V QP D L+ + TT+
Sbjct: 331 SFVIQPQDTEVLIGTSTTL 349
Score = 97 (39.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 31/102 (30%), Positives = 43/102 (42%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLT 213
D + E +N+ +SC A G P P I W KE + SG +++ LT
Sbjct: 519 DTSVEVGKNINISCHAQGEPQPIITWN-KEGVQIT-ESGKFHVDDE----------GTLT 566
Query: 214 IVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPD 255
I D G Y C A+N G TN+ L V ++ A D
Sbjct: 567 IYDAGFPDQGRYECVARNSFGLAVTNMFLTVTAIQGRQAGDD 608
Score = 90 (36.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
LD+ TF+ LI+L L + +NQ++ + +L L L L N + KI +F N+ L
Sbjct: 113 LDKQTFKGLISLEHLYIHFNQLEMLQPETFGDLLRLERLFLHNNKLSKIPAGSFSNLDSL 172
Score = 89 (36.4 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 36/114 (31%), Positives = 49/114 (42%)
Query: 21 MVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDR 80
+ L+ CL CPS C C K TV C IP Q+ T VLDL N +
Sbjct: 11 LFLLAGWCLPGLP-CPSRCLCF----KSTVRCMHLMLDHIP-QVPQQTTVLDLRFNRIRE 64
Query: 81 Y---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
F+KL NL L L+ N I+ + + + + L L L N I + + F
Sbjct: 65 IPGSAFKKLKNLNTLLLNNNHIRKISRNAFEGLENLLYLYLYKNEIHALDKQTF 118
Score = 72 (30.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
LDL +N+I+ +P + L L L+ N I+KI+ AF + L
Sbjct: 55 LDLRFNRIREIPGSAFKKLKNLNTLLLNNNHIRKISRNAFEGLENL 100
Score = 55 (24.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
+ R F L NL+ L L N+I + ++ L L + N ++ + E F ++ +L
Sbjct: 89 ISRNAFEGLENLLYLYLYKNEIHALDKQTFKGLISLEHLYIHFNQLEMLQPETFGDLLRL 148
Score = 53 (23.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 82 TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPI 123
TF L+ L L L N++ +P+ ++ L+ L+L N +
Sbjct: 141 TFGDLLRLERLFLHNNKLSKIPAGSFSNLDSLKRLRLDSNAL 182
>MGI|MGI:2443718 [details] [associations]
symbol:Lrig2 "leucine-rich repeats and immunoglobulin-like
domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443718 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101816 HOGENOM:HOG000113380
HOVERGEN:HBG052353 CTD:9860 OMA:FPTNHER OrthoDB:EOG41NTKF
EMBL:AK173030 EMBL:BC094228 IPI:IPI00605095 IPI:IPI00649164
RefSeq:NP_001020238.1 UniGene:Mm.34855 ProteinModelPortal:Q52KR2
SMR:Q52KR2 PhosphoSite:Q52KR2 PRIDE:Q52KR2
Ensembl:ENSMUST00000046316 GeneID:269473 KEGG:mmu:269473
UCSC:uc008que.1 UCSC:uc012cvk.1 InParanoid:Q52KR2 NextBio:392862
Bgee:Q52KR2 Genevestigator:Q52KR2 GermOnline:ENSMUSG00000032913
Uniprot:Q52KR2
Length = 1054
Score = 117 (46.2 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 45/151 (29%), Positives = 66/151 (43%)
Query: 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTIN 207
IRP+ D T E L C A GSP P++ W K+ G + +R + N
Sbjct: 698 IRPLE-DKTVTRGETAVLQCIAGGSPAPRLNWT-KD-------DGPLLVTERHFFAAA-N 747
Query: 208 SLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPV-YLVASLTTV 266
L L IV + D+G YTC N G +I LNVI + + + TTV
Sbjct: 748 QL--LIIVDAGLEDAGKYTCLMSNTLGTERGHIYLNVISSPNCDSSQSSIGHEDDGWTTV 805
Query: 267 -VTIILTACFVV----LCIILLKAKRKRYAD 292
+ II+ C VV + +I++ R++ D
Sbjct: 806 GIVIIVVVCCVVGTSLIWVIVIYHMRRKNED 836
Score = 97 (39.2 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 33/120 (27%), Positives = 53/120 (44%)
Query: 152 TP-DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLS 210
TP D+T L C A G P P+I W +K + A +R +++ +
Sbjct: 606 TPMDLTIRTGAMARLECAAEGHPTPQISW---QK--DGGTDFPAARERRMHVMPEDDVFF 660
Query: 211 NLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLTTVVTII 270
I V + D GIY+C A+N AG + N SL V++ + + + + T V+ I
Sbjct: 661 ---IANVKIEDMGIYSCMAQNIAGGLSANASLTVLETPSFIRPLEDKTVTRGETAVLQCI 717
Score = 89 (36.4 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 31/93 (33%), Positives = 42/93 (45%)
Query: 58 TTIPEQLDVGTQVLD---LSDNFLDRYT---FRKLINLVELDLSYNQIQFV---PSHILD 108
T + E VG +L+ L DN + FR L NL LDL N I + S
Sbjct: 323 TRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFS 382
Query: 109 SILELRELKLSGNPIQKITHEAFINVPKLNLED 141
+ L +L L GN I+ +T +AFI + L D
Sbjct: 383 GLKSLTKLILQGNRIKSVTQKAFIGLESLEYLD 415
Score = 69 (29.3 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 85 KLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFI---NVPKLNLE 140
KL +L L+L N+I+ V + LR LK+ N I K+ AF N+ +L LE
Sbjct: 212 KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELE 270
Score = 64 (27.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
F L N+ EL+L +N + V L + L++L +S N I+KI+ +A+
Sbjct: 258 FFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAW 306
Score = 61 (26.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 26/100 (26%), Positives = 43/100 (43%)
Query: 35 CPSTCECKWK--GGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYTFR-KLINLVE 91
CP+ C C+ L A ++ + L LDLS N L + + L E
Sbjct: 42 CPAPCACRLPLLDCSRRKL-PAPSWRALSGPLPSDISSLDLSHNRLSNWNNTLESQTLQE 100
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
+ ++YN++ +P + + + L L N I +I EAF
Sbjct: 101 VKMNYNELTEIP-YFGEPTPNITLLSLVHNLIPEINAEAF 139
Score = 57 (25.1 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 89 LVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVP---KLNLED 141
L +L +S N I+ + + L EL LS N + ++ AF+ + +LNL D
Sbjct: 288 LQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGD 343
Score = 57 (25.1 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 69 QVLDLSDNFLDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
Q L +S N +++ + + L ELDLSYNQ+ + + L L L N +
Sbjct: 289 QQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDN---R 345
Query: 126 ITHEA 130
+TH A
Sbjct: 346 VTHIA 350
>UNIPROTKB|O75325 [details] [associations]
symbol:LRRN2 "Leucine-rich repeat neuronal protein 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0007165
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:CH471067
GO:GO:0004872 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000252914
HOVERGEN:HBG052361 EMBL:AF030435 EMBL:AY358290 EMBL:AK312408
EMBL:AL512306 EMBL:BC034047 EMBL:BC068541 IPI:IPI00025256
RefSeq:NP_006329.2 RefSeq:NP_963924.1 UniGene:Hs.26312
ProteinModelPortal:O75325 SMR:O75325 IntAct:O75325 STRING:O75325
PhosphoSite:O75325 PRIDE:O75325 DNASU:10446 Ensembl:ENST00000367175
Ensembl:ENST00000367176 Ensembl:ENST00000367177 GeneID:10446
KEGG:hsa:10446 UCSC:uc001hbe.1 CTD:10446 GeneCards:GC01M204586
H-InvDB:HIX0001502 HGNC:HGNC:16914 HPA:HPA029124 MIM:605492
neXtProt:NX_O75325 PharmGKB:PA162394661 InParanoid:O75325
OMA:LHQQTVE OrthoDB:EOG4JWVCZ PhylomeDB:O75325 GenomeRNAi:10446
NextBio:39593 ArrayExpress:O75325 Bgee:O75325 CleanEx:HS_LRRN2
Genevestigator:O75325 GermOnline:ENSG00000170382 Uniprot:O75325
Length = 713
Score = 103 (41.3 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 36/123 (29%), Positives = 53/123 (43%)
Query: 134 VPKLNLEDFACSPNIRP--ITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISS 191
VP + D C P I P P + E++ L CRA P P+I W+ + ++
Sbjct: 411 VPFREMTDH-CLPLISPRSFPPSLQVASGESMVLHCRALAEPEPEIYWVTPAGL--RLTP 467
Query: 192 GLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAV 251
A R Y T L + VT ++G+YTC A+N G +S + V A+
Sbjct: 468 AHAGRRYRVYPEGT------LELRRVTAEEAGLYTCVAQNLVGADTKTVS---VVVGRAL 518
Query: 252 AQP 254
QP
Sbjct: 519 LQP 521
Score = 100 (40.3 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 34/115 (29%), Positives = 47/115 (40%)
Query: 35 CPSTCECK---W----KGGKE--TVLCKAKNFTTIPEQLDVGTQVLDLSDNFL---DRYT 82
CP C C+ W +E TV C T +P L GTQ L L N + D+
Sbjct: 29 CPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPALPAGTQTLLLQSNSIVRVDQSE 88
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L NL ELDLS N ++ +L L L N + ++ +F + L
Sbjct: 89 LGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLEDHSFAGLASL 143
Score = 69 (29.3 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 20/72 (27%), Positives = 31/72 (43%)
Query: 75 DNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
D LD FR L NL L L+ ++ + + L+ + L L N + ++ A V
Sbjct: 202 DAILDM-NFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQV 260
Query: 135 PKLNLEDFACSP 146
P L D +P
Sbjct: 261 PGLKFLDLNKNP 272
Score = 62 (26.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 71 LDLSDN----FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQ 124
LD+++N F+ F L + L L+ N + + ++S+ L+E+ L GNPI+
Sbjct: 315 LDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIR 372
>UNIPROTKB|Q9H3W5 [details] [associations]
symbol:LRRN3 "Leucine-rich repeat neuronal protein 3"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0030131
HOGENOM:HOG000252914 HOVERGEN:HBG052361 EMBL:AF134481 EMBL:AB060967
EMBL:AY358280 EMBL:CR457397 EMBL:AL442092 EMBL:BC035133
IPI:IPI00465126 RefSeq:NP_001093128.1 RefSeq:NP_001093130.1
RefSeq:NP_060804.3 UniGene:Hs.3781 ProteinModelPortal:Q9H3W5
SMR:Q9H3W5 STRING:Q9H3W5 DMDM:74761421 PRIDE:Q9H3W5 DNASU:54674
Ensembl:ENST00000308478 Ensembl:ENST00000422987
Ensembl:ENST00000451085 GeneID:54674 KEGG:hsa:54674 UCSC:uc003vfs.4
CTD:54674 GeneCards:GC07P110731 HGNC:HGNC:17200 neXtProt:NX_Q9H3W5
PharmGKB:PA30468 InParanoid:Q9H3W5 OMA:RWINMNK OrthoDB:EOG4MGS6W
PhylomeDB:Q9H3W5 GenomeRNAi:54674 NextBio:57220 ArrayExpress:Q9H3W5
Bgee:Q9H3W5 CleanEx:HS_LRRN3 Genevestigator:Q9H3W5 Uniprot:Q9H3W5
Length = 708
Score = 108 (43.1 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 133 NVPKLNLEDFA--CSPNIRPIT-P-DVTAEENENVTLSCRATGSPVPKIKWIFK--EKII 186
NV +++ D C P I P + P ++ E V+ CRAT P P+I WI +K++
Sbjct: 406 NVRQVHFRDMMEICLPLIAPESFPSNLNVEAGSYVSFHCRATAEPQPEIYWITPSGQKLL 465
Query: 187 ANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
N + + Y+ +S L I VT + G+YTC A N G ++ + V
Sbjct: 466 PN------TLTDKFYV----HSEGTLDINGVTPKEGGLYTCIATNLVGADLKSVMIKV 513
Score = 94 (38.1 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 37/153 (24%), Positives = 68/153 (44%)
Query: 17 RVYIMV-LVCTGCLQVF---AECPSTCECK---WKGGKE------TVLCKAKNFTTIPEQ 63
R+++++ L T +Q +CP C C+ W + TV C T P +
Sbjct: 7 RIHVLLGLAITTLVQAVDKKVDCPRLCTCEIRPWFTPRSIYMEASTVDCNDLGLLTFPAR 66
Query: 64 LDVGTQVLDLSDNFLDR--YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGN 121
L TQ+L L N + + Y+ +NL LDLS N + V + + + +L + L N
Sbjct: 67 LPANTQILLLQTNNIAKIEYSTDFPVNLTGLDLSQNNLSSVTNINVKKMPQLLSVYLEEN 126
Query: 122 PIQKITHEAFINVPKLNLEDFACSPNI-RPITP 153
+ ++ + + NL++ + N+ I+P
Sbjct: 127 KLTELPEKCLSELS--NLQELYINHNLLSTISP 157
Score = 80 (33.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 27/95 (28%), Positives = 44/95 (46%)
Query: 48 ETVLCKAKNFTTIPEQLD--VGTQVLDLSDNFLDRYT---FRKLINLVELDLSYNQIQFV 102
+ +L + N I D V LDLS N L T +K+ L+ + L N++ +
Sbjct: 72 QILLLQTNNIAKIEYSTDFPVNLTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTEL 131
Query: 103 PSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
P L + L+EL ++ N + I+ AFI + L
Sbjct: 132 PEKCLSELSNLQELYINHNLLSTISPGAFIGLHNL 166
Score = 62 (26.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/81 (24%), Positives = 36/81 (44%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L + +N + R F+ LINL L ++ + +P + L + L + N + K
Sbjct: 191 EILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENLESISFYDNRLIK 250
Query: 126 ITHEAFINVPKLNLEDFACSP 146
+ H A V L D +P
Sbjct: 251 VPHVALQKVVNLKFLDLNKNP 271
Score = 56 (24.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 15/64 (23%), Positives = 33/64 (51%)
Query: 76 NFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVP 135
+++ F +L L L L+ N + + ++S+ L+E+ + NPI+ ++N+
Sbjct: 323 SYIHPNAFFRLPKLESLMLNSNALSALYHGTIESLPNLKEISIHSNPIRCDCVIRWMNMN 382
Query: 136 KLNL 139
K N+
Sbjct: 383 KTNI 386
>UNIPROTKB|O94898 [details] [associations]
symbol:LRIG2 "Leucine-rich repeats and immunoglobulin-like
domains protein 2" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000113380
HOVERGEN:HBG052353 EMBL:AB018349 EMBL:AL161998 IPI:IPI00478892
PIR:T47152 RefSeq:NP_055628.1 UniGene:Hs.448972 UniGene:Hs.729143
ProteinModelPortal:O94898 SMR:O94898 IntAct:O94898 STRING:O94898
PhosphoSite:O94898 PaxDb:O94898 PRIDE:O94898
Ensembl:ENST00000361127 GeneID:9860 KEGG:hsa:9860 UCSC:uc001edf.1
CTD:9860 GeneCards:GC01P113615 HGNC:HGNC:20889 HPA:HPA015538
MIM:608869 neXtProt:NX_O94898 PharmGKB:PA134905053
InParanoid:O94898 OMA:FPTNHER OrthoDB:EOG41NTKF GenomeRNAi:9860
NextBio:37168 Bgee:O94898 CleanEx:HS_LRIG2 Genevestigator:O94898
GermOnline:ENSG00000198799 Uniprot:O94898
Length = 1065
Score = 116 (45.9 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 45/151 (29%), Positives = 66/151 (43%)
Query: 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTIN 207
IRP+ D T E L C A GSP P++ W K+ G + +R + N
Sbjct: 699 IRPLE-DKTVTRGETAVLQCIAGGSPAPRLNWT-KD-------DGPLLVTERHFFAAA-N 748
Query: 208 SLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPV-YLVASLTTV 266
L L IV + D+G YTC N G +I LNVI + + + TTV
Sbjct: 749 QL--LIIVDAGLEDAGKYTCIMSNTLGTERGHIYLNVISSPNCDSSQSSIGHEDDGWTTV 806
Query: 267 -VTIILTACFVV----LCIILLKAKRKRYAD 292
+ II+ C VV + +I++ R++ D
Sbjct: 807 GIVIIVVVCCVVGTSLIWVIVIYHMRRKNED 837
Score = 99 (39.9 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 33/120 (27%), Positives = 53/120 (44%)
Query: 152 TP-DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLS 210
TP D+T L C A G P P+I W +K + A +R +++ +
Sbjct: 607 TPMDLTIRTGAMARLECAAEGHPAPQISW---QK--DGGTDFPAARERRMHVMPEDDVFF 661
Query: 211 NLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLTTVVTII 270
I V + D GIY+C A+N AG + N SL V++ + + + + T V+ I
Sbjct: 662 ---IANVKIEDMGIYSCMAQNTAGGLSANASLTVLETPSFIRPLEDKTVTRGETAVLQCI 718
Score = 89 (36.4 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 31/89 (34%), Positives = 42/89 (47%)
Query: 58 TTIPEQLDVGTQVLD---LSDNFLDRYT---FRKLINLVELDLSYNQIQFV---PSHILD 108
T + E VG +L+ L DN + FR L NL LDL N+I + S
Sbjct: 324 TRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFA 383
Query: 109 SILELRELKLSGNPIQKITHEAFINVPKL 137
+ L +L L GN I+ IT +AFI + L
Sbjct: 384 GLTSLTKLILQGNQIKSITKKAFIGLESL 412
Score = 69 (29.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 85 KLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFI---NVPKLNLE 140
KL +L L+L N+I+ V + LR LK+ N I K+ AF N+ +L LE
Sbjct: 213 KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELE 271
Score = 68 (29.0 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 30/117 (25%), Positives = 49/117 (41%)
Query: 35 CPSTCECKWK--GGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYTFR-KLINLVE 91
CP+ C C+ L A ++ + L T +LD S N L + + L E
Sbjct: 43 CPAPCSCRIPLLDCSRRKL-PAPSWRALSGLLPPDTAILDFSHNRLSNWNISLESQTLQE 101
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNI 148
+ ++YN++ +P + + + L L N I +I +A P L E S NI
Sbjct: 102 VKMNYNELTEIP-YFGEPTSNITLLSLVHNIIPEINAQALQFYPAL--ESLDLSSNI 155
Score = 60 (26.2 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
F L N+ EL+L +N + V L + L++L +S N I++I+ +A+
Sbjct: 259 FFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAW 307
Score = 60 (26.2 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 21/69 (30%), Positives = 29/69 (42%)
Query: 69 QVLDLSDNFLD------RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
Q LDL +N + F L +L +L L NQI+ + + L L L+ N
Sbjct: 362 QTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNA 421
Query: 123 IQKITHEAF 131
I I AF
Sbjct: 422 IMSIQENAF 430
Score = 59 (25.8 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 69 QVLDLSDNFLDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
Q L +S N ++R + + L ELDLSYNQ+ + + L L L N +
Sbjct: 290 QQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDN---R 346
Query: 126 ITHEA 130
+TH A
Sbjct: 347 VTHIA 351
Score = 57 (25.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 23/77 (29%), Positives = 35/77 (45%)
Query: 71 LDLSDNFLDRYTFRKLINL---VELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
L+L N L R L L +L +S N I+ + + L EL LS N + ++
Sbjct: 268 LELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLD 327
Query: 128 HEAFINVP---KLNLED 141
AF+ + +LNL D
Sbjct: 328 ESAFVGLSLLERLNLGD 344
Score = 49 (22.3 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 22/90 (24%), Positives = 43/90 (47%)
Query: 69 QVLDLSDN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
Q L+L N ++ TF+ L +L L + N I + + + EL+L N + +
Sbjct: 218 QFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTR 277
Query: 126 ITHEAFINVPKLNLEDFACSPN-IRPITPD 154
+ ++ ++ ++ L+ S N I I+PD
Sbjct: 278 V-NKGWLYGLRM-LQQLYVSQNAIERISPD 305
>UNIPROTKB|Q6EMK4 [details] [associations]
symbol:VASN "Vasorin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR003961
PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
SMART:SM00181 GO:GO:0016021 GO:GO:0005576 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 EMBL:AY166584 EMBL:AY358298 EMBL:AY358299
EMBL:BC013767 EMBL:BC068575 IPI:IPI00395488 RefSeq:NP_612449.2
UniGene:Hs.372579 ProteinModelPortal:Q6EMK4 SMR:Q6EMK4
DIP:DIP-46245N STRING:Q6EMK4 PhosphoSite:Q6EMK4 DMDM:74748436
PaxDb:Q6EMK4 PeptideAtlas:Q6EMK4 PRIDE:Q6EMK4
Ensembl:ENST00000304735 GeneID:114990 KEGG:hsa:114990
UCSC:uc002cwj.1 CTD:114990 GeneCards:GC16P004421 HGNC:HGNC:18517
HPA:HPA011246 MIM:608843 neXtProt:NX_Q6EMK4 PharmGKB:PA134974883
eggNOG:NOG273568 HOGENOM:HOG000261606 HOVERGEN:HBG084318
InParanoid:Q6EMK4 OMA:VTQLRPN OrthoDB:EOG4GTKD4 PhylomeDB:Q6EMK4
GenomeRNAi:114990 NextBio:79480 Bgee:Q6EMK4 CleanEx:HS_VASN
Genevestigator:Q6EMK4 GermOnline:ENSG00000168140 Uniprot:Q6EMK4
Length = 673
Score = 154 (59.3 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 44/123 (35%), Positives = 60/123 (48%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLD---VGTQVLDLSDNFLDRYTFRKLINLVE 91
CPS C+C +TV C A+ TT+P + VG V + LD +F L L
Sbjct: 24 CPSGCQCSQP---QTVFCTARQGTTVPRDVPPDTVGLYVFENGITMLDAGSFAGLPGLQL 80
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPN-IRP 150
LDLS NQI +PS + + L L L+ N + +IT+E F + +L E N IR
Sbjct: 81 LDLSQNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLRRL--ERLYLGKNRIRH 138
Query: 151 ITP 153
I P
Sbjct: 139 IQP 141
>RGD|71066 [details] [associations]
symbol:Lrrn3 "leucine rich repeat neuronal 3" species:10116
"Rattus norvegicus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IDA] [GO:0032403
"protein complex binding" evidence=IDA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:71066
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0032403 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914 HOVERGEN:HBG052361
CTD:54674 OrthoDB:EOG4MGS6W EMBL:AF291437 EMBL:BC081791
IPI:IPI00192491 PIR:JC7763 RefSeq:NP_110483.1 UniGene:Rn.39124
ProteinModelPortal:Q9ESY6 STRING:Q9ESY6 PRIDE:Q9ESY6
Ensembl:ENSRNOT00000008655 GeneID:81514 KEGG:rno:81514
UCSC:RGD:71066 eggNOG:NOG294135 InParanoid:Q9ESY6 NextBio:615003
Genevestigator:Q9ESY6 GermOnline:ENSRNOG00000006368 Uniprot:Q9ESY6
Length = 707
Score = 111 (44.1 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 35/118 (29%), Positives = 57/118 (48%)
Query: 133 NVPKLNLEDFA--CSPNIRPIT-PDVT-AEENENVTLSCRATGSPVPKIKWIFK--EKII 186
NV +++ D C P I P + P + E + V+L CRAT P P+I WI ++++
Sbjct: 406 NVRQVHFRDMMEICLPLIAPESFPSILDVEADSYVSLHCRATAEPQPEIYWITPSGKRLL 465
Query: 187 ANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
N + ++ Y+ +S L I +T + G+YTC A N G +I + V
Sbjct: 466 PN------TLREKFYV----HSEGTLDIRGITPKEGGLYTCIATNLVGADLKSIMIKV 513
Score = 89 (36.4 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 37/146 (25%), Positives = 63/146 (43%)
Query: 20 IMVLVCTGCLQVFAECPSTCECK---WKGGKE------TVLCKAKNFTTIPEQLDVGTQV 70
I LV G +V +CP C C+ W + TV C P +L TQ+
Sbjct: 16 ITALVQAGDKKV--DCPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPADTQI 73
Query: 71 LDLSDNFLDR--YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITH 128
L L N + R ++ +NL LDLS N + V + + + +L + L N + ++
Sbjct: 74 LLLQTNNIARIEHSTDFPVNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPE 133
Query: 129 EAFINVPKLNLEDFACSPNI-RPITP 153
+ + NL++ + N+ I+P
Sbjct: 134 KCLYGLS--NLQELYVNHNLLSAISP 157
Score = 77 (32.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 48 ETVLCKAKNFTTIPEQLD--VGTQVLDLSDNFLDRYT---FRKLINLVELDLSYNQIQFV 102
+ +L + N I D V LDLS N L T +K+ L+ + L N++ +
Sbjct: 72 QILLLQTNNIARIEHSTDFPVNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTEL 131
Query: 103 PSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
P L + L+EL ++ N + I+ AF+ + L
Sbjct: 132 PEKCLYGLSNLQELYVNHNLLSAISPGAFVGLHNL 166
Score = 59 (25.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 76 NFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVP 135
+++ F +L L L L+ N + + ++S+ L+E+ + NPI+ +IN+
Sbjct: 323 SYIHPNAFFRLPKLESLMLNSNALSALYHGTIESLPNLKEISIHSNPIRCDCVIRWINMN 382
Query: 136 KLNL 139
K N+
Sbjct: 383 KTNI 386
>MGI|MGI:1916925 [details] [associations]
symbol:Pxdn "peroxidasin homolog (Drosophila)" species:10090
"Mus musculus" [GO:0004601 "peroxidase activity" evidence=ISO]
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0020037 "heme binding" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO;IDA]
[GO:0031012 "extracellular matrix" evidence=ISO;IDA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
MGI:MGI:1916925 GO:GO:0005783 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
HSSP:P21809 GO:GO:0005201 Gene3D:1.10.640.10 eggNOG:NOG262194
GeneTree:ENSGT00550000074325 HOGENOM:HOG000016084
HOVERGEN:HBG108312 CTD:7837 OMA:EPVITWN OrthoDB:EOG4J1179
EMBL:AK142872 EMBL:AC159626 EMBL:AC165078 EMBL:BC112913
IPI:IPI00461384 RefSeq:NP_852060.2 UniGene:Mm.251774
ProteinModelPortal:Q3UQ28 SMR:Q3UQ28 PhosphoSite:Q3UQ28
PaxDb:Q3UQ28 PRIDE:Q3UQ28 Ensembl:ENSMUST00000122328 GeneID:69675
KEGG:mmu:69675 UCSC:uc007ngl.2 InParanoid:Q3UQ28 NextBio:330062
Bgee:Q3UQ28 CleanEx:MM_PXDN Genevestigator:Q3UQ28 Uniprot:Q3UQ28
Length = 1475
Score = 107 (42.7 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 39/135 (28%), Positives = 63/135 (46%)
Query: 6 CADDVMMIYEWRVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLD 65
C +++ + W + M +V + + A CPS C C + TV C +P +
Sbjct: 9 CLLALLLCFAW--WAMAVVAS---KQGAGCPSRCLCF----RTTVRCMHLLLEAVPA-VA 58
Query: 66 VGTQVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
T +LDL N + FR+L +L L L+ NQI+ +P+ + + L+ L L N
Sbjct: 59 PQTSILDLRFNRIREIQPGAFRRLRSLNTLLLNNNQIKKIPNGAFEDLENLKYLYLYKNE 118
Query: 123 IQKITHEAFINVPKL 137
IQ I +AF + L
Sbjct: 119 IQSIDRQAFKGLASL 133
Score = 100 (40.3 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 34/126 (26%), Positives = 55/126 (43%)
Query: 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK 204
+P I D+T E NV L C + G P P I W K+ + SG +++ ++
Sbjct: 521 TPVFASIPSDMTVEVGTNVQLPCSSQGEPEPAITWN-KDGVQVT-ESGKFHISPEGFL-- 576
Query: 205 TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLT 264
TIN + +D+G Y C A+N G ++ L+V V DP Y+ S+
Sbjct: 577 TINDVGT--------ADAGRYECVARNTIGYASVSMVLSV-NVPDVSRNGDP-YVATSIV 626
Query: 265 TVVTII 270
+ +
Sbjct: 627 EAIATV 632
Score = 95 (38.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 29/107 (27%), Positives = 44/107 (41%)
Query: 133 NVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISS 191
+V + E+ C P I D V +CRA G+P P+I W+ ++ +
Sbjct: 229 SVATITPEELNCERPRITSEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRNNNELSMKTD 288
Query: 192 GLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFT 238
N+ ++ L I +D G+Y C AKN AGE T
Sbjct: 289 SRLNL---------LDD-GTLMIQNTQEADEGVYQCMAKNVAGEAKT 325
Score = 92 (37.4 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 30/89 (33%), Positives = 39/89 (43%)
Query: 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTIN 207
I+P +V E+VTL C ATG P+P+I W ++ I +N I
Sbjct: 343 IQPQNTEVLV--GESVTLECSATGHPLPQITWTRGDRTPLPIDP---RVN--------IT 389
Query: 208 SLSNLTIVAVTMSDSGIYTCRAKNGAGEV 236
L I V SDSG YTC A N +
Sbjct: 390 PSGGLYIQNVAQSDSGEYTCFASNSVDSI 418
Score = 79 (32.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 34/126 (26%), Positives = 54/126 (42%)
Query: 119 SGNPIQKITHEAFINVPKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIK 178
+ N + I AFI V L F +P R + E + V C A G P P I
Sbjct: 411 ASNSVDSIHATAFIIVQAL--PQFTVTPQSRVVI------EGQTVDFQCAAKGHPQPVIA 462
Query: 179 WIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKN--GAGEV 236
W K + +S +++R ++ S L I V + D G Y C+A N G+ +V
Sbjct: 463 WT---KGGSQLS-----VDRRHLVL----SSGTLRISGVALHDQGQYECQAVNIIGSQKV 510
Query: 237 FTNISL 242
++++
Sbjct: 511 VAHLTV 516
Score = 72 (30.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
F L NL L L N+IQ + + L +L L N I+ + E+F ++PKL
Sbjct: 103 FEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQIETLDPESFQHLPKL 157
>RGD|1303079 [details] [associations]
symbol:Amigo1 "adhesion molecule with Ig like domain 1"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0007156
"homophilic cell adhesion" evidence=IPI] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=IPI] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0007413 "axonal fasciculation" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IDA] [GO:0030424 "axon"
evidence=IEA] [GO:0042552 "myelination" evidence=IEP] [GO:0050772
"positive regulation of axonogenesis" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1303079 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042552 GO:GO:0050772 GO:GO:0007157 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57463
eggNOG:NOG146733 HOGENOM:HOG000231327 HOVERGEN:HBG080231
OrthoDB:EOG4TB4BP GO:GO:0007413 GO:GO:0007156 EMBL:AY237729
IPI:IPI00201253 RefSeq:NP_996764.1 UniGene:Rn.116338
ProteinModelPortal:Q80ZD7 STRING:Q80ZD7 GeneID:295365
KEGG:rno:295365 UCSC:RGD:1303079 InParanoid:Q80ZD7 NextBio:639469
ArrayExpress:Q80ZD7 Genevestigator:Q80ZD7 Uniprot:Q80ZD7
Length = 493
Score = 118 (46.6 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 33/109 (30%), Positives = 49/109 (44%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDR----YTFRKLINLV 90
CP+ C C + C + +P+ L T +LDLS N L R +T +L NL
Sbjct: 34 CPANCLC----ASNILSCSKQQLPNVPQSLPGYTALLDLSHNNLSRLKAEWTPTRLTNLH 89
Query: 91 ELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNL 139
L LS+N + F+ S + LR L LS N + + F + L +
Sbjct: 90 SLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSGLQALEV 138
Score = 77 (32.2 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 205 TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV-IKVETAVAQPDPVYLVASL 263
T++ NL V + D G+YTC A GE F N +L+V +KV L +
Sbjct: 319 TVSEDGNLHFKEVQVEDGGVYTCYAM---GETF-NETLSVELKVYNFTLHGHHDTLNTAY 374
Query: 264 TTVVTIILTACFVVLCIIL 282
TT+V IL+ V++ + L
Sbjct: 375 TTLVGCILSVVLVLIYLYL 393
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 117 (46.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 40/152 (26%), Positives = 71/152 (46%)
Query: 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK 204
+P++ D E V L C+ATG+P P+I W ++ ++ + +R ++
Sbjct: 692 TPSLVVPLEDRVVSVGETVALQCKATGNPPPRITWFKGDRPLS--------LTERHHLTP 743
Query: 205 TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYL-VASL 263
N L L + V D+G YTC N G + L+V+ A + D + + ++
Sbjct: 744 D-NQL--LVVQNVVAEDAGRYTCEMSNTLGTERAHSQLSVLPA--AGCRKDGTTVGIFTI 798
Query: 264 TTVVTIILTACFVVLCIIL-LKAKRKRYADVN 294
V +I+LT+ V +CII + K + Y+ N
Sbjct: 799 AVVSSIVLTS-LVWVCIIYQTRKKSEEYSVTN 829
Score = 108 (43.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 152 TP-DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLS 210
TP D+T L C ATG P P+I W +K + A +R +++ + +
Sbjct: 604 TPHDITIRTTTMARLECAATGHPNPQIAW---QK--DGGTDFPAARERRMHVMPD-DDVF 657
Query: 211 NLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAV 251
+T V + D+G+Y+C A+N AG + N +L V++ + V
Sbjct: 658 FITDVKI--DDAGVYSCTAQNSAGSISANATLTVLETPSLV 696
Score = 86 (35.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 35/148 (23%), Positives = 66/148 (44%)
Query: 16 WRVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSD 75
W + + + T A C + C C G +++ C + +P L T+ L+LS
Sbjct: 22 WLLLLRLEPVTAAAGPRAPCAAACTC---AG-DSLDCGGRGLAALPGDLPSWTRSLNLSY 77
Query: 76 NFL---DRYTFRKLINLVELDLSYNQIQFVPS------HILDSILELRELK-LSGNPIQK 125
N L D F L NL E+ L+ N++ VPS H++ L+ +++ + G+ ++
Sbjct: 78 NKLSEIDPAGFEDLPNLQEVYLNNNELTAVPSLGAASSHVVSLFLQHNKIRSVEGSQLKA 137
Query: 126 ITHEAFINVPKLNLEDF--ACSPNIRPI 151
+++ N+ + C P+ PI
Sbjct: 138 YLSLEVLDLSLNNITEVRNTCFPHGPPI 165
Score = 85 (35.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 71 LDLSDNFLDRYTFR--KLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITH 128
L LS N + + R KL L +LDL+ N+I+ + + L LKL N I K+T
Sbjct: 193 LRLSKNRITQLPVRAFKLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTD 252
Query: 129 EAFINVPKLNL 139
AF + K+++
Sbjct: 253 GAFWGLSKMHV 263
Score = 74 (31.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFI---NVPKLNL 139
F L +L +L L N+I+ V + L L L GN I+ + +AF+ N+ +L++
Sbjct: 378 FSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAIRSVQFDAFVKMKNLKELHI 437
Query: 140 --EDFACSPNIRPITP 153
+ F C ++ + P
Sbjct: 438 SSDSFLCDCQLKWLPP 453
Score = 63 (27.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 69 QVLDLSDNFLDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
+VL L N + + T F L + L L YN + V S L + L +L LS N I +
Sbjct: 238 EVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIAR 297
Query: 126 ITHEAFINVPKLN 138
I + + KL+
Sbjct: 298 IHRKGWSFCQKLH 310
Score = 58 (25.5 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 88 NLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVP---KLNL 139
++V L L +N+I+ V L + L L L LS N I ++ + F + P +LNL
Sbjct: 116 HVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNITEVRNTCFPHGPPIKELNL 170
Score = 51 (23.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 87 INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
++L LDLS N I V + ++EL L+GN I + AF
Sbjct: 139 LSLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAF 183
>UNIPROTKB|Q6WRI0 [details] [associations]
symbol:IGSF10 "Immunoglobulin superfamily member 10"
species:9606 "Homo sapiens" [GO:0001503 "ossification"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 GO:GO:0007275 GO:GO:0005576 GO:GO:0030154
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042246
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0001503 HSSP:Q9BZR6 EMBL:AY273815 EMBL:AK093069 EMBL:AK098838
EMBL:BC031063 IPI:IPI00183913 IPI:IPI00478293 IPI:IPI00795608
RefSeq:NP_001171616.1 RefSeq:NP_001171617.1 RefSeq:NP_849144.2
UniGene:Hs.741587 ProteinModelPortal:Q6WRI0 SMR:Q6WRI0
STRING:Q6WRI0 PhosphoSite:Q6WRI0 DMDM:74749492 PaxDb:Q6WRI0
PRIDE:Q6WRI0 Ensembl:ENST00000282466 GeneID:285313 KEGG:hsa:285313
UCSC:uc011bob.2 UCSC:uc011boc.2 UCSC:uc011bod.2 CTD:285313
GeneCards:GC03M151143 HGNC:HGNC:26384 HPA:HPA012921
neXtProt:NX_Q6WRI0 PharmGKB:PA134900760 eggNOG:NOG239806
HOGENOM:HOG000113014 HOVERGEN:HBG107995 InParanoid:Q6WRI0
OMA:PYVSEDG OrthoDB:EOG45MN4F PhylomeDB:Q6WRI0 GenomeRNAi:285313
NextBio:95425 ArrayExpress:Q6WRI0 Bgee:Q6WRI0 CleanEx:HS_IGSF10
Genevestigator:Q6WRI0 Uniprot:Q6WRI0
Length = 2623
Score = 113 (44.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 27/102 (26%), Positives = 46/102 (45%)
Query: 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSN 211
T ++T V L CRA G P P + WI + + + SS RQ ++ T++
Sbjct: 1752 TKEITVHSGSTVELKCRAEGRPSPTVTWILANQTVVSESS----QGSRQAVV-TVDG--T 1804
Query: 212 LTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQ 253
L + +++ D G Y C A N G+ + + VI + +
Sbjct: 1805 LVLHNLSIYDRGFYKCVASNPGGQDSLLVKIQVIAAPPVILE 1846
Score = 108 (43.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 35/115 (30%), Positives = 56/115 (48%)
Query: 134 VPKLNLEDFACSPNIRPITPDVTAEEN--ENVTLSCRATGSPVPKIKWIFKEKIIANISS 191
V L +E+ SP I + T E N + + L+C ATG P P+I W K + +
Sbjct: 1929 VVMLTMEERVTSPRIEAASQKRT-EVNFGDKLLLNCSATGEPKPQIMWRLPSKAVVDQQH 1987
Query: 192 GLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE--VFTNISLNV 244
+ + +I N +L I +VT DSG+Y C A+N G+ + ++SL +
Sbjct: 1988 RVGS-----WIHVYPNG--SLFIGSVTEKDSGVYLCVARNKMGDDLILMHVSLRL 2035
Score = 105 (42.0 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 136 KLNLEDFACSPNIRPITP-DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLA 194
K++L +P IR + + + L C TG P PKI W+ S+ +
Sbjct: 2131 KVHLTVITAAPRIRQSNKTNKRIKAGDTAVLDCEVTGDPKPKIFWLLP-------SNDMI 2183
Query: 195 NMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVI 245
+ + +Y T ++ +LTI V + DSG Y C A+N +G+ L+V+
Sbjct: 2184 SFSIDRY---TFHANGSLTINKVKLLDSGEYVCVARNPSGDDTKMYKLDVV 2231
Score = 101 (40.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 122 PIQKITHEAFINVPKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIF 181
P+Q+ T + L+ F + T N + L C A G+P+P I W
Sbjct: 1625 PVQEATTSKLLPFDSLSRYIFEKPRIVGGKAASFTIPANSDAFLPCEAVGNPLPTIHW-- 1682
Query: 182 KEKIIANISSGLANMNKRQYIIKTINSLSN--LTIVAVTMSDSGIYTCRAKNGAGEVFTN 239
+ SGL +++KR+ + + L N L+I V + D G Y C A N G +
Sbjct: 1683 -----TRVPSGL-DLSKRKQNSR-VQVLPNGTLSIQRVEIQDRGQYLCSASNLFGTDHLH 1735
Query: 240 ISLNVI 245
++L+V+
Sbjct: 1736 VTLSVV 1741
Score = 100 (40.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 165 LSCRATGSPVPKIKWIFKEKIIAN--ISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDS 222
+ C+A+GSPVP+I W + + N + + + R+Y T+ + L V +++
Sbjct: 2058 VDCKASGSPVPEISWSLPDGTMINNAMQADDSGHRTRRY---TLFNNGTLYFNKVGVAEE 2114
Query: 223 GIYTCRAKNGAGEVFTNISLNVIKVETAVAQ 253
G YTC A+N G+ + L VI + Q
Sbjct: 2115 GDYTCYAQNTLGKDEMKVHLTVITAAPRIRQ 2145
Score = 98 (39.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 34/124 (27%), Positives = 52/124 (41%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYT---FRKLINLVE 91
CP C C V C + T+IP+ + + ++L N L R F L L
Sbjct: 29 CPRRCACYMP---TEVHCTFRYLTSIPDSIPPNVERINLGYNSLVRLMETDFSGLTKLEL 85
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNIRPI 151
L L N I +P + L+ LK+S N ++K+ + F + L + NI I
Sbjct: 86 LMLHSNGIHTIPDKTFSDLQALQVLKMSYNKVRKLQKDTFYGLRSLTRLHMDHN-NIEFI 144
Query: 152 TPDV 155
P+V
Sbjct: 145 NPEV 148
Score = 95 (38.5 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 30/128 (23%), Positives = 51/128 (39%)
Query: 134 VPKLNLEDFACSPNIRPITPD-VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ KL + + P I P V E+++L C + G P P IKW + +
Sbjct: 2420 IEKLVILEIGQKPVILTYAPGTVKGISGESLSLHCVSDGIPKPNIKWTMPSGYVVD---- 2475
Query: 193 LANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVA 252
+N + YI+ + L I T D G Y C+A+N G + + ++ +
Sbjct: 2476 RPQINGK-YIL---HDNGTLVIKEATAYDRGNYICKAQNSVGHTLITVPVMIVAYPPRIT 2531
Query: 253 QPDPVYLV 260
P +V
Sbjct: 2532 NRPPRSIV 2539
Score = 91 (37.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 27/98 (27%), Positives = 50/98 (51%)
Query: 48 ETVLCKAKNFTTIPEQL--DV-GTQVLDLSDNF---LDRYTFRKLINLVELDLSYNQIQF 101
E ++ + TIP++ D+ QVL +S N L + TF L +L L + +N I+F
Sbjct: 84 ELLMLHSNGIHTIPDKTFSDLQALQVLKMSYNKVRKLQKDTFYGLRSLTRLHMDHNNIEF 143
Query: 102 VPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNL 139
+ + + LR + L GN + K+ + F+++ L +
Sbjct: 144 INPEVFYGLNFLRLVHLEGNQLTKLHPDTFVSLSYLQI 181
Score = 91 (37.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 25/92 (27%), Positives = 41/92 (44%)
Query: 156 TAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIV 215
TA + CRA G+P P++ WI + I + + T++ L I
Sbjct: 2250 TAVRHSKKHFDCRAEGTPSPEVMWIMPDNIFLTAPYYGSRI--------TVHKNGTLEIR 2301
Query: 216 AVTMSDSGIYTCRAKNGAGEVFTNISLNVIKV 247
V +SDS + C A+N GE + L V+++
Sbjct: 2302 NVRLSDSADFICVARNEGGESVLVVQLEVLEM 2333
Score = 89 (36.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 33/123 (26%), Positives = 48/123 (39%)
Query: 124 QKITHEAFINVPKLNLEDFACSPNIRPITP-DVTAEENENVTLSCRATGSPVPKIKWIFK 182
Q I VP + + A P I P + L C A G P P+I W
Sbjct: 2509 QNSVGHTLITVPVMIV---AYPPRITNRPPRSIVTRTGAAFQLHCVALGVPKPEITWEMP 2565
Query: 183 EKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISL 242
+ + + +S +R + + ++ L I SDSGIY C AKN G + +
Sbjct: 2566 DHSLLSTAS-----KERTHGSEQLHLQGTLVIQNPQTSDSGIYKCTAKNPLGSDYAATYI 2620
Query: 243 NVI 245
VI
Sbjct: 2621 QVI 2623
Score = 79 (32.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 26/84 (30%), Positives = 37/84 (44%)
Query: 161 ENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMS 220
E + L C +TG P I W+ + SS +K K +N+ L I+ VT
Sbjct: 589 ETLDLPCHSTGIPDASISWVIPGNNVLYQSS----RDK-----KVLNN-GTLRILQVTPK 638
Query: 221 DSGIYTCRAKNGAGEVFTNISLNV 244
D G Y C A N +G F ++V
Sbjct: 639 DQGYYRCVAANPSGVDFLIFQVSV 662
>ZFIN|ZDB-GENE-010126-4 [details] [associations]
symbol:ntrk3b "neurotrophic tyrosine kinase,
receptor, type 3b" species:7955 "Danio rerio" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004714 "transmembrane receptor protein tyrosine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA;IC] [GO:0007169
"transmembrane receptor protein tyrosine kinase signaling pathway"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IC] [GO:0005030 "neurotrophin receptor activity"
evidence=ISS] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR007110
InterPro:IPR011009 InterPro:IPR017441 InterPro:IPR020777
Pfam:PF07714 PRINTS:PR01939 PROSITE:PS00107 PROSITE:PS50011
PROSITE:PS50835 ZFIN:ZDB-GENE-010126-4 GO:GO:0005524 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004714 SUPFAM:SSF56112
InterPro:IPR003598 SMART:SM00408 GO:GO:0007169 GO:GO:0007166
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:JN837103 UniGene:Dr.115649 ProteinModelPortal:G9JKB4
Uniprot:G9JKB4
Length = 578
Score = 131 (51.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 35/93 (37%), Positives = 52/93 (55%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLS-NL 212
++T E NVTLSC +GSPVP++ W K GL ++N Q + N+ S NL
Sbjct: 217 NLTVLEGGNVTLSCNGSGSPVPEVDWAVK---------GLHSINTHQSTVYLPNTHSINL 267
Query: 213 TIVAVTMSDSG-IYTCRAKNGAGEVFTNISLNV 244
T+V V+ D+G + TC ++N G N+SL +
Sbjct: 268 TLVNVSRDDNGFVLTCISENVVG--MNNVSLQL 298
Score = 63 (27.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 23/134 (17%), Positives = 54/134 (40%)
Query: 13 IYEWRVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLD 72
++ WR++ + + G +CP TC C + C + L + +
Sbjct: 11 VFTWRLFFLSSIFQGYWSSMLDCPPTCSCS----PTEIYCNKSDVGNFFPLLALQESAGN 66
Query: 73 LSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFI 132
S+N FR + + + ++ ++ +Q + ++ L+ L + +++I AF
Sbjct: 67 GSNNNDIEELFRNITS-IHIE-NWTGLQILRDVDMELYTGLQRLTIINCNLRQIQPRAFS 124
Query: 133 NVPKLNLEDFACSP 146
P L + + +P
Sbjct: 125 RNPHLRYINLSRNP 138
Score = 62 (26.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 55 KNFTTIPEQLDVGTQVLDLSDNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELR 114
+N T+I + G Q+L D ++ YT + + ++ +L QIQ P LR
Sbjct: 78 RNITSIHIENWTGLQIL--RDVDMELYTGLQRLTIINCNL--RQIQ--P-RAFSRNPHLR 130
Query: 115 ELKLSGNPIQKITHEAF--INVPKLNLED--FACSPNIR 149
+ LS NP+ ++ + F + + +L LE F C IR
Sbjct: 131 YINLSRNPLASLSWQLFQHLQLVELRLEGVVFDCGCKIR 169
>ZFIN|ZDB-GENE-080327-15 [details] [associations]
symbol:lrrtm4l1 "leucine rich repeat transmembrane
neuronal 4 like 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-15 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0042802 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:BX005125
EMBL:BX293550 IPI:IPI00876741 Ensembl:ENSDART00000113737
Bgee:F1QVN0 Uniprot:F1QVN0
Length = 571
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 41/112 (36%), Positives = 55/112 (49%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDR---YTFRKLINLVE 91
CP +C C+ GK V C++ F +PE + V Q L L N L Y F L L+
Sbjct: 31 CPYSCHCE---GK-IVHCESSAFQDVPENISVSCQGLSLRYNDLHTMLPYQFAHLNQLLW 86
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143
L L +NQI FV S + L+EL LS N I ++ + F VP L D +
Sbjct: 87 LYLDHNQIMFVDSRAFQGVRRLKELILSSNRISQLHNVTFHGVPNLRSLDLS 138
>ZFIN|ZDB-GENE-060503-114 [details] [associations]
symbol:amigo1 "adhesion molecule with Ig-like
domain 1" species:7955 "Danio rerio" [GO:0007420 "brain
development" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450
ZFIN:ZDB-GENE-060503-114 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 CTD:57463 GeneTree:ENSGT00530000063545 EMBL:CU462975
IPI:IPI00497206 RefSeq:XP_001924023.1 UniGene:Dr.141809
ProteinModelPortal:F1QF94 Ensembl:ENSDART00000109732
GeneID:100144409 KEGG:dre:100144409 NextBio:20791439 Bgee:F1QF94
Uniprot:F1QF94
Length = 491
Score = 125 (49.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 38/110 (34%), Positives = 54/110 (49%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD----RYTFRKLINLV 90
C C C V C N T IP L T VLD+S N + ++T KL NL
Sbjct: 32 CHKMCIC----ASNIVSCSKMNLTMIPSDLPNYTAVLDISFNEITGLRAQWTKHKLPNLH 87
Query: 91 ELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLE 140
L LS+N + F+ S + +LR L LS N ++++ + FI P ++LE
Sbjct: 88 NLLLSHNGLSFISSEAFIFVKQLRYLDLSSNVLRQL--DEFIFEPLIHLE 135
Score = 67 (28.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 22/95 (23%), Positives = 40/95 (42%)
Query: 211 NLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLTTVVTII 270
+L + + DSG+YTC A E V+KV + L + TT+V +
Sbjct: 326 DLELKTIRPEDSGVYTCFA---VSEYLNETLYVVVKVHNFTLNGNGDTLNTAYTTLVGCL 382
Query: 271 LTACFVVLCIILLKAKRKRYADVNRRYLEDKCESN 305
+ V++ + L + D ++ + ED S+
Sbjct: 383 ASVVLVLIYLYLTPCRCFCCPDKSKNHHEDSIHSS 417
>WB|WBGene00022129 [details] [associations]
symbol:lron-11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104286 HSSP:P07359 EMBL:FO081276
EMBL:AF304125 RefSeq:NP_491035.1 UniGene:Cel.7069
ProteinModelPortal:G5EGE7 SMR:G5EGE7 EnsemblMetazoa:Y71F9B.8
GeneID:171837 KEGG:cel:CELE_Y71F9B.8 CTD:171837 WormBase:Y71F9B.8
OMA:AFVDNIN NextBio:872913 Uniprot:G5EGE7
Length = 542
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 47/152 (30%), Positives = 76/152 (50%)
Query: 18 VYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
V I++++ +G + C S C+C K T +CK + +IP LD T VLDLS+N
Sbjct: 5 VLILLVLVSGVIS----CQSGCKCPTK---TTAVCKGSSLRSIPILLDPRTTVLDLSNNR 57
Query: 78 LDRYTFRKLI---NLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
+ R + +L NL +L L N I + + + ++ LR L LS N + + +E F +
Sbjct: 58 ISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFSKL 117
Query: 135 PKLNLEDFACSPNIRPITPDVTAEENENVTLS 166
NL+ S N + P+ A ++ TLS
Sbjct: 118 K--NLKTLIISSNDVQLGPECFAGLSQLQTLS 147
>RGD|628861 [details] [associations]
symbol:Lrrc3 "leucine rich repeat containing 3" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:628861 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00390000003913 HOGENOM:HOG000073532
HOVERGEN:HBG052349 CTD:81543 eggNOG:NOG318731 OMA:HCECALQ
OrthoDB:EOG48PMM1 EMBL:AB086432 IPI:IPI00199541 RefSeq:NP_663712.1
UniGene:Rn.83630 ProteinModelPortal:P59035
Ensembl:ENSRNOT00000001632 GeneID:246773 KEGG:rno:246773
UCSC:RGD:628861 InParanoid:P59035 NextBio:623859
Genevestigator:P59035 GermOnline:ENSRNOG00000001217 Uniprot:P59035
Length = 257
Score = 142 (55.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/107 (34%), Positives = 54/107 (50%)
Query: 28 CLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFR 84
CL++ A CP +C+C G V C ++ IP + T +L L N + R F+
Sbjct: 26 CLRLGASCPQSCQCPDHAGAVAVHCSSRGLQEIPRDIPANTVLLKLDANRISRVPNGAFQ 85
Query: 85 KLINLVELDLSYNQIQFV-PSHILDSILELRELKLSGNPIQKITHEA 130
L L ELDLS+N I+ + P+ LR L LS N I++I +A
Sbjct: 86 HLPQLRELDLSHNAIEAIGPAAFSGLAGGLRLLDLSHNRIRRIPKDA 132
>UNIPROTKB|Q86WK6 [details] [associations]
symbol:AMIGO1 "Amphoterin-induced protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=ISS]
[GO:0007157 "heterophilic cell-cell adhesion" evidence=ISS]
[GO:0007413 "axonal fasciculation" evidence=ISS] [GO:0042552
"myelination" evidence=ISS] [GO:0050772 "positive regulation of
axonogenesis" evidence=ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 EMBL:AY237007
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030424 InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042552
GO:GO:0050772 GO:GO:0007157 InterPro:IPR000372 SMART:SM00013
EMBL:AK295678 EMBL:AL355145 EMBL:BC040879 EMBL:AB032989
IPI:IPI00410140 RefSeq:NP_065754.2 UniGene:Hs.726479
ProteinModelPortal:Q86WK6 SMR:Q86WK6 STRING:Q86WK6
PhosphoSite:Q86WK6 DMDM:68052342 PaxDb:Q86WK6 PRIDE:Q86WK6
DNASU:57463 Ensembl:ENST00000369862 Ensembl:ENST00000369864
GeneID:57463 KEGG:hsa:57463 UCSC:uc001dxx.4 CTD:57463
GeneCards:GC01M110046 HGNC:HGNC:20824 HPA:HPA046152
neXtProt:NX_Q86WK6 PharmGKB:PA142672625 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 InParanoid:Q86WK6
OMA:SVELKVY OrthoDB:EOG4TB4BP PhylomeDB:Q86WK6 ChiTaRS:AMIGO1
GenomeRNAi:57463 NextBio:63666 Bgee:Q86WK6 CleanEx:HS_AMIGO1
Genevestigator:Q86WK6 GermOnline:ENSG00000181754 GO:GO:0007413
GO:GO:0007156 InterPro:IPR013106 Pfam:PF07686 Uniprot:Q86WK6
Length = 493
Score = 116 (45.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDR----YTFRKLINLV 90
CP+ C C + C + +P L T +LDLS N L R +T +L L
Sbjct: 34 CPAACLC----ASNILSCSKQQLPNVPHSLPSYTALLDLSHNNLSRLRAEWTPTRLTQLH 89
Query: 91 ELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNL 139
L LS+N + F+ S + LR L LS N ++ + F ++ L +
Sbjct: 90 SLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQVLEV 138
Score = 76 (31.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 31/129 (24%), Positives = 58/129 (44%)
Query: 157 AEENENVTLSCRATGSPVPKIKWIF--KEKIIANISSGLANMNKRQYIIKTINSLSNLTI 214
A + + + C + K+ W+ E+++ +++G +++K +L
Sbjct: 280 AHLGDTLIIKCDTKQQGMTKV-WVTPSNERVLDEVTNGTVSVSKD----------GSLLF 328
Query: 215 VAVTMSDSGIYTCRAKNGAGEVFTNISLNV-IKVETAVAQPDPVYLVASLTTVVTIILTA 273
V + D G+YTC A GE F N +L+V +KV L + TT+V IL+
Sbjct: 329 QQVQVEDGGVYTCYAM---GETF-NETLSVELKVHNFTLHGHHDTLNTAYTTLVGCILSV 384
Query: 274 CFVVLCIIL 282
V++ + L
Sbjct: 385 VLVLIYLYL 393
>MGI|MGI:2653612 [details] [associations]
symbol:Amigo1 "adhesion molecule with Ig like domain 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=ISO] [GO:0007156 "homophilic
cell adhesion" evidence=ISO;ISS] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=ISO;ISS] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007413 "axonal fasciculation" evidence=ISO;ISS] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0042552 "myelination" evidence=ISS] [GO:0050772 "positive
regulation of axonogenesis" evidence=ISO;ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2653612 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0042552 GO:GO:0050772 GO:GO:0007157
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CTD:57463 eggNOG:NOG146733 HOGENOM:HOG000231327 HOVERGEN:HBG080231
OrthoDB:EOG4TB4BP GO:GO:0007413 GO:GO:0007156 EMBL:AY237008
EMBL:AB167509 EMBL:AK035960 EMBL:AK173118 EMBL:AL671854
EMBL:BC010598 EMBL:BC022907 IPI:IPI00122248 IPI:IPI00608009
RefSeq:NP_001004293.1 RefSeq:NP_666249.2 UniGene:Mm.275752 PDB:2XOT
PDBsum:2XOT ProteinModelPortal:Q80ZD8 SMR:Q80ZD8 STRING:Q80ZD8
PhosphoSite:Q80ZD8 PRIDE:Q80ZD8 Ensembl:ENSMUST00000050909
Ensembl:ENSMUST00000106656 Ensembl:ENSMUST00000106659 GeneID:229715
KEGG:mmu:229715 GeneTree:ENSGT00530000063545 InParanoid:Q80ZD8
NextBio:379639 Bgee:Q80ZD8 CleanEx:MM_AMIGO1 Genevestigator:Q80ZD8
GermOnline:ENSMUSG00000050947 Uniprot:Q80ZD8
Length = 492
Score = 121 (47.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 18 VYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
V++++ + CP+ C C + C + +P+ L T +LDLS N
Sbjct: 17 VFLLLFEVARAGRSVVSCPANCLC----ASNILSCSKQQLPNVPQSLPSYTALLDLSHNN 72
Query: 78 LDR----YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFIN 133
L R +T +L NL L LS+N + F+ S + LR L LS N + + F +
Sbjct: 73 LSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSD 132
Query: 134 VPKLNL 139
+ L +
Sbjct: 133 LQALEV 138
Score = 70 (29.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 31/129 (24%), Positives = 56/129 (43%)
Query: 157 AEENENVTLSCRATGSPVPKIKWIF--KEKIIANISSGLANMNKRQYIIKTINSLSNLTI 214
A + +T+ C + K+ W+ E++++ S+G ++ K +
Sbjct: 280 AHLGDTLTIRCDTKQQGMTKV-WVSPSNEQVLSQGSNGSVSVRNGDLFFKKVQ------- 331
Query: 215 VAVTMSDSGIYTCRAKNGAGEVFTNISLNV-IKVETAVAQPDPVYLVASLTTVVTIILTA 273
+ D G+YTC A GE F N +L+V +KV L + TT+V IL+
Sbjct: 332 ----VEDGGVYTCYAM---GETF-NETLSVELKVYNFTLHGHHDTLNTAYTTLVGCILSV 383
Query: 274 CFVVLCIIL 282
V++ + L
Sbjct: 384 VLVLIYLYL 392
>UNIPROTKB|Q9BY71 [details] [associations]
symbol:LRRC3 "Leucine-rich repeat-containing protein 3"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 HOGENOM:HOG000073532 HOVERGEN:HBG052349 CTD:81543
eggNOG:NOG318731 OMA:HCECALQ OrthoDB:EOG48PMM1 EMBL:AB058646
EMBL:AY061857 EMBL:AY358120 EMBL:BC119648 EMBL:BC119649
IPI:IPI00008377 RefSeq:NP_112153.1 UniGene:Hs.326579
ProteinModelPortal:Q9BY71 SMR:Q9BY71 IntAct:Q9BY71
MINT:MINT-7242320 PhosphoSite:Q9BY71 DMDM:18202742 PaxDb:Q9BY71
PRIDE:Q9BY71 Ensembl:ENST00000291592 GeneID:81543 KEGG:hsa:81543
UCSC:uc002zfa.3 GeneCards:GC21P045875 HGNC:HGNC:14965 HPA:HPA017975
neXtProt:NX_Q9BY71 PharmGKB:PA30462 InParanoid:Q9BY71
PhylomeDB:Q9BY71 GenomeRNAi:81543 NextBio:71777 ArrayExpress:Q9BY71
Bgee:Q9BY71 CleanEx:HS_LRRC3 Genevestigator:Q9BY71
GermOnline:ENSG00000160233 Uniprot:Q9BY71
Length = 257
Score = 141 (54.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 37/107 (34%), Positives = 50/107 (46%)
Query: 28 CLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFR 84
CL + A CP C C G V C + +PE + T +L L N + F+
Sbjct: 26 CLHLGAACPQPCRCPDHAGAVAVFCSLRGLQEVPEDIPANTVLLKLDANKISHLPDGAFQ 85
Query: 85 KLINLVELDLSYNQIQFVPSHILDSILE-LRELKLSGNPIQKITHEA 130
L L ELDLS+N I+ + S + LR L LS N IQ+I +A
Sbjct: 86 HLHRLRELDLSHNAIEAIGSATFAGLAGGLRLLDLSYNRIQRIPKDA 132
>ZFIN|ZDB-GENE-040822-27 [details] [associations]
symbol:negr1 "neuronal growth regulator 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IDA] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-040822-27 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0042802 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00650000092858 InterPro:IPR013106 Pfam:PF07686
HOGENOM:HOG000019085 HOVERGEN:HBG017341 CTD:257194 eggNOG:NOG320658
KO:K06775 OMA:ITGSACD OrthoDB:EOG4C2H9S EMBL:BX908753 EMBL:BX950870
EMBL:CR548641 EMBL:BC080221 EMBL:AF241637 IPI:IPI00628206
RefSeq:NP_001003851.1 UniGene:Dr.86564 IntAct:A0A4W4
Ensembl:ENSDART00000028895 GeneID:445374 KEGG:dre:445374
InParanoid:A0A4W4 NextBio:20832081 Uniprot:A0A4W4
Length = 346
Score = 98 (39.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 111 LELRELKLSGNPIQKITHEAFINV-PKLNLEDFACSPNIRPITPDVTAEENENVTLSCRA 169
L+++++ ++ + + ++ N+ PKL P I I+ D+T E NV+L C A
Sbjct: 104 LQIQKVDVTDEGVYTCSIQSERNLHPKLIQLIVKVPPKIYDISSDITVNEGSNVSLICAA 163
Query: 170 TGSPVPKIKW 179
+G P PKI W
Sbjct: 164 SGKPEPKISW 173
Score = 90 (36.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 33/111 (29%), Positives = 51/111 (45%)
Query: 165 LSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224
L C A P P +W EK I N+ G+ +I ++S S LT+ +T G
Sbjct: 244 LRCEAAAVPSPVFEWYKGEKRI-NMGQGI--------VINNLSSRSVLTVKNMTQDRYGN 294
Query: 225 YTCRAKNGAGEVFTNISLN----VIKVETAVAQPDPV--YLVASLTTVVTI 269
YTC A N G ++ LN + T A+ YL+ +L+++VT+
Sbjct: 295 YTCVAVNRLGTANASVPLNPSNPAMYGSTGGAEVLLACWYLILALSSLVTV 345
>UNIPROTKB|H3BMN3 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0005154 "epidermal growth factor receptor
binding" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] GO:GO:0043491
GO:GO:0031175 InterPro:IPR000372 SMART:SM00013 GO:GO:0021954
GO:GO:0048715 HGNC:HGNC:21205 EMBL:AC046168 EMBL:AC105133
EMBL:AC110607 Ensembl:ENST00000567726 Bgee:H3BMN3 Uniprot:H3BMN3
Length = 125
Score = 124 (48.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 36/110 (32%), Positives = 53/110 (48%)
Query: 16 WRVYIMVLVCTGCLQVFAE-CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
W+ I++LV L A CP CEC + VLC K F +PE + T++LDL
Sbjct: 17 WQP-ILLLVLGSVLSGSATGCPPRCECSAQD--RAVLCHRKRFVAVPEGIPTETRLLDLG 73
Query: 75 DN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGN 121
N L++ F +L EL+L+ N + V +++ LR L L N
Sbjct: 74 KNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 123
>ZFIN|ZDB-GENE-090312-22 [details] [associations]
symbol:mxra5 "matrix-remodelling associated 5"
species:7955 "Danio rerio" [GO:0048010 "vascular endothelial growth
factor receptor signaling pathway" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA] [GO:0005021 "vascular
endothelial growth factor-activated receptor activity"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 ZFIN:ZDB-GENE-090312-22 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104014 EMBL:BX322647 IPI:IPI00898560
Ensembl:ENSDART00000113486 Uniprot:F1QPU8
Length = 2480
Score = 115 (45.5 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 29/118 (24%), Positives = 54/118 (45%)
Query: 137 LNLEDFACSPNI-RPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLAN 195
+NL A P + +P + TA + + C++ G P P+I W+ K + + S +
Sbjct: 1586 VNLIVLAEHPRVLQPRYREATAYLGQTIEFECQSKGHPQPRITWVLPNKEV--VHSSVPT 1643
Query: 196 MNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQ 253
+++I + + L + ++ D GIY C A N AG ++ L V + + Q
Sbjct: 1644 HGTPEHMISVLPN-GTLHMKSINQMDRGIYKCIASNAAGADAISVRLTVATLAPIIQQ 1700
Score = 107 (42.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 39/155 (25%), Positives = 66/155 (42%)
Query: 124 QKITH-EAFINVPKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFK 182
+K+T E ++ P +N F + N + V++ ++ + C ATG+P P++ W+
Sbjct: 2081 RKVTRVEILVSPPAIN--GFKGTTN----SLRVSSVRDQRKLIDCDATGTPAPRVMWVLP 2134
Query: 183 EKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISL 242
E ++ + M T+ L I +V M+DSG C A+N GE + L
Sbjct: 2135 ENVVLPAPYYGSRM--------TVYRNGTLDIRSVRMTDSGQLACIARNEGGETKFIVQL 2186
Query: 243 NVIKVETAVAQPDPVYLVASLTTVVTIILTACFVV 277
+V + P LT TI L F +
Sbjct: 2187 HVTDILDKPKLKSPKMETFLLTVGRTINLNCSFEI 2221
Score = 100 (40.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 161 ENVTLSCRATGSPVPKIKWIFKEKIIAN-ISSGLANMNKR--QYIIKTINSLSNLTIVAV 217
+N+ + C A+G P PKI+W + + N + N+ R +Y++ N L + V
Sbjct: 1911 DNLKVDCVASGLPNPKIQWALPDGTMINSVIKSERNVGSRTRRYVVFD-NG--TLLLNEV 1967
Query: 218 TMSDSGIYTCRAKNGAGEVFTNISLNVI 245
M + G YTC A+N G+ N+ + V+
Sbjct: 1968 GMHEEGNYTCYAENQVGKDEMNVHVKVV 1995
Score = 91 (37.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 48 ETVLCKAKNFTTIPEQL--D-VGTQVLDLSDN---FLDRYTFRKLINLVELDLSYNQIQF 101
E +L N IP+ D + Q+L LS N L R T L +L L L +N+++F
Sbjct: 82 ELLLMHGNNVHQIPDGTFRDLISLQMLKLSYNKLKLLSRQTLMGLWSLTRLHLDHNRLEF 141
Query: 102 VPSHILDSILELRELKLSGNPIQKITHEA 130
+ + LR L L GN +Q++ H A
Sbjct: 142 IHPDAFQGLTNLRLLHLEGNQLQQL-HPA 169
Score = 87 (35.7 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 26/121 (21%), Positives = 57/121 (47%)
Query: 17 RVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN 76
+++IM+++ + V CP C C V C ++ T+P + + ++L N
Sbjct: 10 QIWIMLMLIAVPVAVQC-CPRPCACHQP---VEVHCTFRSLLTVPAGVPKQVERMNLGFN 65
Query: 77 FLDRYTFRKLINL--VELDLSY-NQIQFVPSHILDSILELRELKLSGNPIQKITHEAFIN 133
+ + T+ L +EL L + N + +P ++ L+ LKLS N ++ ++ + +
Sbjct: 66 TIHKITYSSFAGLRKMELLLMHGNNVHQIPDGTFRDLISLQMLKLSYNKLKLLSRQTLMG 125
Query: 134 V 134
+
Sbjct: 126 L 126
Score = 85 (35.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 145 SPNIRPIT-PDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYII 203
+P I+ ++ +VT E V +C A G+P P I WI + + + S + N ++
Sbjct: 1695 APIIQQLSLENVTFPEGSTVYFNCSARGAPPPSINWITPDGMQLHPSQFINGRNL--FVF 1752
Query: 204 KTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIK 246
L + +++++D+G Y C N G I L V K
Sbjct: 1753 PN----GTLHLHSLSLTDAGRYECSVTNVIGNARRAIILTVRK 1791
Score = 84 (34.6 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 23/89 (25%), Positives = 44/89 (49%)
Query: 165 LSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224
L C +G+P P+I W K + + + + R IK +++ L+I++VT + G
Sbjct: 1818 LDCITSGNPEPRIIWRTPSKKLVDAHY---SYDSR---IK-VSANGTLSIISVTEKEDGE 1870
Query: 225 YTCRAKNGAGEVFTNISLNVIKVETAVAQ 253
Y C A+N G+ F ++++ + Q
Sbjct: 1871 YLCVARNKIGDDFVPFKVSIMAKPAKIEQ 1899
Score = 84 (34.6 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 32/94 (34%), Positives = 41/94 (43%)
Query: 161 ENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMS 220
E+V+L C A G P P + W F A SS +Y I N+ L I V
Sbjct: 2015 ESVSLQCSAKGEPTPLVLW-FSPTNRAITSSS------DKYFIH--NN-GTLIIKKVQRF 2064
Query: 221 DSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQP 254
D G Y C A+N AG+ V +VE V+ P
Sbjct: 2065 DGGNYICLARNSAGQ-----DRKVTRVEILVSPP 2093
Score = 81 (33.6 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 82 TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNL 139
TFR LI+L L LSYN+++ + L + L L L N ++ I +AF + L L
Sbjct: 98 TFRDLISLQMLKLSYNKLKLLSRQTLMGLWSLTRLHLDHNRLEFIHPDAFQGLTNLRL 155
>MGI|MGI:2141485 [details] [associations]
symbol:Lrtm2 "leucine-rich repeats and transmembrane domains
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2141485
GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 GeneTree:ENSGT00700000104083 HOGENOM:HOG000290674
CTD:654429 eggNOG:NOG248110 HOVERGEN:HBG081938 OMA:GEHEDQK
OrthoDB:EOG4C5CKK EMBL:AK039006 EMBL:AK045494 EMBL:BC058944
IPI:IPI00221765 RefSeq:NP_001165678.1 RefSeq:NP_766080.1
UniGene:Mm.121498 ProteinModelPortal:Q8BGX3 SMR:Q8BGX3
PhosphoSite:Q8BGX3 PaxDb:Q8BGX3 PRIDE:Q8BGX3
Ensembl:ENSMUST00000068351 Ensembl:ENSMUST00000112756
Ensembl:ENSMUST00000168793 GeneID:211187 KEGG:mmu:211187
UCSC:uc009dmb.2 InParanoid:Q8BGX3 NextBio:373160 Bgee:Q8BGX3
CleanEx:MM_LRTM2 Genevestigator:Q8BGX3
GermOnline:ENSMUSG00000055003 Uniprot:Q8BGX3
Length = 370
Score = 144 (55.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 12 MIYEWRV--YIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQ 69
++ +WR +I + ++V CP +C C + + V C TT+P + TQ
Sbjct: 14 LVLQWRQVSWITCWIALCAVEVIPACPFSCTCDSRSLE--VDCSGLGLTTVPPDVPAATQ 71
Query: 70 VLDLSDNFLDR---YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
L L +N L + F L NL LDLS N + +P I + ++ L EL+L N I+ +
Sbjct: 72 SLLLLNNKLSALPSWAFANLSNLQRLDLSNNFLDQLPRSIFEDLVNLTELQLRNNSIRTL 131
Query: 127 THEAFINVPKLNLEDFA 143
+ + P L D +
Sbjct: 132 DRDLLQHSPLLRHLDLS 148
>WB|WBGene00020649 [details] [associations]
symbol:sma-10 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
[GO:0034713 "type I transforming growth factor beta receptor
binding" evidence=IPI] [GO:0005114 "type II transforming growth
factor beta receptor binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0040018 GO:GO:0000003 GO:GO:0007179 GO:GO:0030511
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 HSSP:Q9UQH9 EMBL:FO081576
GeneID:176849 KEGG:cel:CELE_T21D12.9 CTD:176849 UCSC:T21D12.9c.1
NextBio:894278 RefSeq:NP_499896.1 ProteinModelPortal:Q965M2
SMR:Q965M2 STRING:Q965M2 EnsemblMetazoa:T21D12.9a.1
EnsemblMetazoa:T21D12.9a.2 WormBase:T21D12.9a HOGENOM:HOG000022300
InParanoid:Q965M2 OMA:PIATIHP ArrayExpress:Q965M2 Uniprot:Q965M2
Length = 881
Score = 118 (46.6 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 37/105 (35%), Positives = 51/105 (48%)
Query: 152 TP-DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLS 210
TP D+ + C ATG+P P+IKW F++ I A +R Y+ T N
Sbjct: 621 TPEDMPLLVGQTAKFLCAATGTPRPEIKWAFEQ-----IPFPAAEA-RRLYV--TPND-D 671
Query: 211 NLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPD 255
++ I+ VT D G YTC A N AG+ T S N+I E P+
Sbjct: 672 HIYIMNVTKEDQGAYTCHATNVAGQ--TQASANLIVFENFFHYPE 714
Score = 78 (32.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 33/135 (24%), Positives = 60/135 (44%)
Query: 11 MMIYEWRVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQV 70
M++Y + I+ + C C C G V C + + + IP + T++
Sbjct: 1 MIVYSLLLLILYDFLPKVVTFDTVCIGLCHCV---GN-VVDCSSLDLSEIPTTIPNNTRI 56
Query: 71 LDLSDN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI- 126
L LSDN +D+ + L LD+S N I+ + ++ L+ L + N + +I
Sbjct: 57 LLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNRLARIP 116
Query: 127 --THEAFINVPKLNL 139
+HE ++ KL+L
Sbjct: 117 RGSHELG-HLEKLDL 130
Score = 74 (31.1 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 34/102 (33%), Positives = 49/102 (48%)
Query: 69 QVLDLSDNFLDRYT--FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQ-- 124
++L++ N L R +L +L +LDL N I V S L + +R + LS N I
Sbjct: 103 KILNIRKNRLARIPRGSHELGHLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLISYL 162
Query: 125 -KITHEAFINVPKLNLEDFACSPNIRPITPDVTAEENENVTL 165
K T A +N+ KL+L S +I I D + N VTL
Sbjct: 163 PKPTTSAKVNIEKLDL----ASNSITDIGTDHFSSFNTLVTL 200
Score = 72 (30.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
+VLDLS N + + ++ L L L N+IQ +PS + +L EL LS N I
Sbjct: 294 EVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSANSIDS 353
Query: 126 ITHEAFINVPKLNLEDFA 143
+ A + + L+ D +
Sbjct: 354 LHKFALVGMSSLHKLDLS 371
Score = 70 (29.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 58 TTIPEQLD--VGTQVLDLSDN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILE 112
T E+L + +DLS N +L + T +N+ +LDL+ N I + + S
Sbjct: 137 TVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAKVNIEKLDLASNSITDIGTDHFSSFNT 196
Query: 113 LRELKLSGNPIQKITHEAFINVPKLNLED 141
L LKL+ N I + +F + KL D
Sbjct: 197 LVTLKLARNHITTLNQFSFSRLRKLESLD 225
Score = 68 (29.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 29/84 (34%), Positives = 39/84 (46%)
Query: 67 GTQVLDLSDNFLDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPI 123
G + L+LS N + T L +L LDLSYNQIQ +L+ L L N I
Sbjct: 268 GLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRI 327
Query: 124 QKITHEAFINVPKLNLEDFACSPN 147
Q + +F V + LE+ S N
Sbjct: 328 QSLPSGSF-RVLR-QLEELILSAN 349
Score = 67 (28.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 89 LVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
L L + NQ++ +P + L EL L+ NPI I EAF
Sbjct: 393 LRSLRFTNNQLRVIPKRAFERFPALEELDLTDNPIATIHPEAF 435
Score = 64 (27.6 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 66 VGTQVLDLSDNFL-DRYT--FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
V + LDL+ N + D T F LV L L+ N I + + +L L L+ N
Sbjct: 171 VNIEKLDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNM 230
Query: 123 IQKITHEAFINVPKL 137
I+++ AF +P L
Sbjct: 231 IREVRFLAFNQLPSL 245
Score = 53 (23.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 82 TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPI 123
+FR L L EL LS N I + L + L +L LS N +
Sbjct: 334 SFRVLRQLEELILSANSIDSLHKFALVGMSSLHKLDLSSNTL 375
>MGI|MGI:2447899 [details] [associations]
symbol:Lrrc3 "leucine rich repeat containing 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2447899 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HOGENOM:HOG000073532 HOVERGEN:HBG052349 CTD:81543 eggNOG:NOG318731
OMA:HCECALQ OrthoDB:EOG48PMM1 EMBL:AY061858 IPI:IPI00169651
RefSeq:NP_660134.1 UniGene:Mm.133301 ProteinModelPortal:P59034
SMR:P59034 PhosphoSite:P59034 PRIDE:P59034
Ensembl:ENSMUST00000057608 GeneID:237387 KEGG:mmu:237387
InParanoid:P59034 NextBio:383332 Bgee:P59034 CleanEx:MM_LRRC3
Genevestigator:P59034 GermOnline:ENSMUSG00000051652 Uniprot:P59034
Length = 257
Score = 140 (54.3 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 37/107 (34%), Positives = 53/107 (49%)
Query: 28 CLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFR 84
CL++ A CP C+C G V C ++ IP + T +L L N + R F+
Sbjct: 26 CLRLGASCPQACQCPDHAGAVAVHCSSRGLQEIPRDIPADTVLLKLDANRISRVPNGAFQ 85
Query: 85 KLINLVELDLSYNQIQFV-PSHILDSILELRELKLSGNPIQKITHEA 130
L L ELDLS+N I+ + P+ LR L LS N I++I +A
Sbjct: 86 HLPQLRELDLSHNAIEAIGPAAFSGLAGGLRLLDLSHNRIRRIPKDA 132
>FB|FBgn0034083 [details] [associations]
symbol:lbk "lambik" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AE013599 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 RefSeq:NP_611091.2
ProteinModelPortal:A1ZAB1 SMR:A1ZAB1 STRING:A1ZAB1 PaxDb:A1ZAB1
EnsemblMetazoa:FBtr0302084 GeneID:36788 KEGG:dme:Dmel_CG8434
UCSC:CG8434-RA CTD:36788 FlyBase:FBgn0034083 eggNOG:NOG329771
InParanoid:A1ZAB1 OMA:LEINWST OrthoDB:EOG4T4B98 GenomeRNAi:36788
NextBio:800384 Bgee:A1ZAB1 Uniprot:A1ZAB1
Length = 1252
Score = 103 (41.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 32/99 (32%), Positives = 46/99 (46%)
Query: 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT 205
P + ++T + E L C A+G P P+I +K S A +R +I+
Sbjct: 834 PTFLQVPSNLTLDAGEMARLVCSASGDPTPEIAL---QKFGG--SEFPAATERRLQVIRE 888
Query: 206 INSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
N+ I SDSGIYTC A + AGE+ N +L V
Sbjct: 889 ENAF---LITNAKPSDSGIYTCTALSAAGEIKVNATLVV 924
Score = 95 (38.5 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 33/115 (28%), Positives = 53/115 (46%)
Query: 34 ECPSTCECKWKGGKETVL--CKAKNFTTIPEQLDVGTQVLDLSDNFLDRYT---FRKLIN 88
+CP C+C VL C + +P L Q L L++N L+ T R L+N
Sbjct: 264 DCPKDCKCL------NVLFDCDKLHLERVPV-LPSYVQTLHLANNKLNDTTVLEIRNLLN 316
Query: 89 LVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143
L ++ L N ++ +P I + L+ L L+ N I I+ E+ +P L D +
Sbjct: 317 LTKVSLKRNLLEVIPKFI--GLSGLKHLVLANNHITSISSESLAALPLLRTLDLS 369
Score = 77 (32.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 69 QVLDLSDNFLDRYTFRKLI---NLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
+VLDLS+N ++ + + L L L+L++N++Q++ + D + L EL L N +
Sbjct: 531 EVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSW 590
Query: 126 ITHEAFINVP 135
I + P
Sbjct: 591 IIEDQSAAAP 600
Score = 76 (31.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 28/76 (36%), Positives = 40/76 (52%)
Query: 71 LDLSDNFLDRY---TFRKLINLVELDLSYNQI-QFVPSHILDSILELRELKLSGNPIQKI 126
L+LS N + R T+ +L LDLS N I +F P H LD + L+ L L+ N +Q +
Sbjct: 509 LNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQH-LDCLHRLKTLNLAHNRLQYL 567
Query: 127 THEAFI---NVPKLNL 139
F N+ +LNL
Sbjct: 568 QENTFDCVKNLEELNL 583
Score = 66 (28.3 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 61 PEQLDV--GTQVLDLSDN---FLDRYTFRKLINLVELDLSYNQIQFV-----PSHILDSI 110
P+ LD + L+L+ N +L TF + NL EL+L N++ ++ + +
Sbjct: 545 PQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGL 604
Query: 111 LELRELKLSGNPIQKITHEAFINVPKLNL 139
+LR L L GN +++I+ +A + L +
Sbjct: 605 RKLRRLDLHGNNLKQISTKAMSGLNNLEI 633
>MGI|MGI:3609246 [details] [associations]
symbol:Lingo3 "leucine rich repeat and Ig domain containing
3" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3609246 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HSSP:Q05793 HOVERGEN:HBG057546 CTD:645191
OMA:EIDNWPL OrthoDB:EOG4THVSV EMBL:AC166937 EMBL:BC072620
IPI:IPI00131641 RefSeq:NP_001013780.2 UniGene:Mm.40213
ProteinModelPortal:Q6GQU6 SMR:Q6GQU6 PhosphoSite:Q6GQU6
PRIDE:Q6GQU6 Ensembl:ENSMUST00000053986 GeneID:237403
KEGG:mmu:237403 UCSC:uc007gey.2 InParanoid:Q6GQU6 NextBio:383344
Bgee:Q6GQU6 Genevestigator:Q6GQU6 Uniprot:Q6GQU6
Length = 589
Score = 144 (55.7 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 39/114 (34%), Positives = 56/114 (49%)
Query: 33 AECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRKLINL 89
A CP+ CEC TV C + T IPE + T++L+LS N L+ L L
Sbjct: 22 AGCPARCECS--ASTRTVACGRRRLTAIPEGIPAETRMLELSRNRIRCLNPGDLASLPTL 79
Query: 90 VELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143
ELDL++N I V ++ LR L+L GN ++ I F ++ L L D +
Sbjct: 80 EELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTHLDSLTLLDLS 133
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 66/237 (27%), Positives = 94/237 (39%)
Query: 69 QVLDLSDNFL---DRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGN-PI- 123
++L+LSDN L + TF + L L + N + +L + + L G P
Sbjct: 320 RLLNLSDNLLSTLEENTFHSVNTLETLRVDGNPLA-CDCRLLWIVQRRKTLNFDGRLPAC 378
Query: 124 ---QKITHEAFINVPKLNL-EDFAC-SPNIRPIT-PDVTAEENENVTLSCRATGSPVPKI 177
++ +A N+P L E F C P IR VTA E ++V CRA G P P +
Sbjct: 379 ATPAEVRGDALHNLPDSVLFEYFVCRKPKIRERRLQHVTATEGDDVRFLCRAEGEPAPTV 438
Query: 178 KWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE-- 235
W+ + S A R ++ LTI DSG YTC A N G
Sbjct: 439 AWVTPQH-----HSVTAASRGRARVLPG----GTLTIADTRPQDSGTYTCVASNAGGNDT 489
Query: 236 VFTNISLNVIKV--------ETAVAQPDPVYLVASLTTVVTIILTACFVVL-CIILL 283
F +++ ET V P+ L L + +T VVL C +LL
Sbjct: 490 YFATLTVQPAANRTQGDGHNETQVGVRFPLDLTTILVSTAMGCITFLGVVLFCFLLL 546
>UNIPROTKB|Q6PJG9 [details] [associations]
symbol:LRFN4 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 4" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000237343
HOVERGEN:HBG052352 EMBL:BC000207 EMBL:BC015581 EMBL:BC027475
EMBL:BC094813 EMBL:AB209005 IPI:IPI00172530 RefSeq:NP_076941.2
UniGene:Hs.209979 UniGene:Hs.714189 ProteinModelPortal:Q6PJG9
SMR:Q6PJG9 STRING:Q6PJG9 PhosphoSite:Q6PJG9 DMDM:62286924
PaxDb:Q6PJG9 PRIDE:Q6PJG9 Ensembl:ENST00000309602 GeneID:78999
KEGG:hsa:78999 UCSC:uc001ojq.1 CTD:78999 GeneCards:GC11P066625
HGNC:HGNC:28456 MIM:612810 neXtProt:NX_Q6PJG9 PharmGKB:PA134922153
eggNOG:NOG246097 InParanoid:Q6PJG9 KO:K16357 OMA:PHGGNGS
OrthoDB:EOG4GTKCM PhylomeDB:Q6PJG9 GenomeRNAi:78999 NextBio:67607
ArrayExpress:Q6PJG9 Bgee:Q6PJG9 CleanEx:HS_LRFN4
Genevestigator:Q6PJG9 GermOnline:ENSG00000173621 Uniprot:Q6PJG9
Length = 635
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 44/154 (28%), Positives = 71/154 (46%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD 79
+++L+ +G A CP C C+ + LC + +P +D T L L+DNF+
Sbjct: 6 LLLLLASGA----AACPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVELRLADNFIQ 61
Query: 80 RY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
FR + LV+L LS N I + + + LR L L GN + ++ + + P
Sbjct: 62 ALGPPDFRNMTGLVDLTLSRNAITRIGARAFGDLESLRSLHLDGNRLVELGTGS-LRGP- 119
Query: 137 LNLEDFACSPN-IRPITP---DVTAEENENVTLS 166
+NL+ S N + I P D E E++ LS
Sbjct: 120 VNLQHLILSGNQLGRIAPGAFDDFLESLEDLDLS 153
Score = 111 (44.1 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 33/107 (30%), Positives = 46/107 (42%)
Query: 141 DFACSPN-IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE-KIIANISSGLANMNK 198
+F+C P I T + E + TL CRA G P P + W+ + +++ N S A N
Sbjct: 275 EFSCEPPLIARHTQRLWVLEGQRATLRCRALGDPAPTMHWVGPDDRLVGNSSRARAFPN- 333
Query: 199 RQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVI 245
L I D+G YTC A N AGE + L V+
Sbjct: 334 -----------GTLEIGVTGAGDAGGYTCIATNPAGEATARVELRVL 369
Score = 78 (32.5 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 30/93 (32%), Positives = 44/93 (47%)
Query: 66 VGTQVLDLSDNFLDRYT---FRKLI-NLVELDLSYNQIQFVPSHILDSILELRELKLSGN 121
V Q L LS N L R F + +L +LDLSYN ++ VP + ++ L L L N
Sbjct: 120 VNLQHLILSGNQLGRIAPGAFDDFLESLEDLDLSYNNLRQVPWAGIGAMPALHTLNLDHN 179
Query: 122 PIQKITHEAFINVPKLNLEDFACSPNIRPITPD 154
I + AF + +L+ D S + + PD
Sbjct: 180 LIDALPPGAFAQLGQLSRLDLT-SNRLATLAPD 211
>ZFIN|ZDB-GENE-030827-4 [details] [associations]
symbol:tpbga "trophoblast glycoprotein a"
species:7955 "Danio rerio" [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IMP] [GO:2000052
"positive regulation of non-canonical Wnt receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-030827-4 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0090090 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 HSSP:Q9BZR6 GO:GO:2000052 CTD:100507050
HOVERGEN:HBG053843 EMBL:JN653073 EMBL:AB097825 IPI:IPI00508902
RefSeq:NP_919373.1 UniGene:Dr.25206 GeneID:373095 KEGG:dre:373095
InParanoid:Q7T2W3 NextBio:20813366 Uniprot:Q7T2W3
Length = 372
Score = 140 (54.3 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 39/116 (33%), Positives = 58/116 (50%)
Query: 20 IMVLVCTGCLQVFA-ECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFL 78
++ L+C + A CP+ CEC TV C +K+ IP + T+ L ++ N +
Sbjct: 10 VLGLLCAAAVSAGALVCPTGCECS--EAALTVKCVSKDLRDIPSGIPGYTRNLFITGNHI 67
Query: 79 DRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
+ +F+ L N+ L LS N+I V SH S+ LR L LS N + I EAF
Sbjct: 68 SQIGPESFQGLENVTNLSLSNNRISEVKSHTFSSLRSLRSLDLSNNQLAVIHPEAF 123
>UNIPROTKB|C9JPM9 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0007610 "behavior"
evidence=IEA] [GO:0035418 "protein localization to synapse"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
[GO:0060076 "excitatory synapse" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0007610 InterPro:IPR003591 SMART:SM00369
GO:GO:0050808 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
EMBL:AC016670 HGNC:HGNC:19408 IPI:IPI00917222
ProteinModelPortal:C9JPM9 SMR:C9JPM9 STRING:C9JPM9
Ensembl:ENST00000452811 HOGENOM:HOG000185833 ArrayExpress:C9JPM9
Bgee:C9JPM9 Uniprot:C9JPM9
Length = 183
Score = 128 (50.1 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 46/169 (27%), Positives = 73/169 (43%)
Query: 22 VLVCT--GCLQVFAECPSTCE--CKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
V++C C Q+ PS C C+ +G + C+A N T P L G L L N
Sbjct: 20 VVLCLLGACFQMLPAAPSGCPQLCRCEG--RLLYCEALNLTEAPHNLS-GLLGLSLRYNS 76
Query: 78 LDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
L F L+ L L L +N I V + ++EL LS N I ++ + F +
Sbjct: 77 LSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPM 136
Query: 135 PKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE 183
P L D + + ++ + PD+ + TL RA ++ IF++
Sbjct: 137 PNLRSVDLSYN-KLQALAPDLFHGLRKLTTLHMRANAIQFVPVR-IFQD 183
>UNIPROTKB|B7Z841 [details] [associations]
symbol:NCAM2 "Neural cell adhesion molecule 2" species:9606
"Homo sapiens" [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR007110
InterPro:IPR009138 PRINTS:PR01838 PROSITE:PS50835 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG052579
EMBL:AP001138 UniGene:Hs.473450 HGNC:HGNC:7657 ChiTaRS:NCAM2
EMBL:AP001114 EMBL:AP001115 EMBL:AP001136 EMBL:AP001137
EMBL:AP001252 EMBL:AK302870 IPI:IPI00922843 SMR:B7Z841
STRING:B7Z841 Ensembl:ENST00000535285 UCSC:uc011acc.2
Uniprot:B7Z841
Length = 424
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/82 (42%), Positives = 45/82 (54%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLT 213
+ TAE E +T SCRA+GSP P I W K+I N++ YI+K N+ LT
Sbjct: 244 NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEE--------NEK-YILKGSNT--ELT 292
Query: 214 IVAVTMSDSGIYTCRAKNGAGE 235
+ + SD G Y CRA N AGE
Sbjct: 293 VRNIINSDGGPYVCRATNKAGE 314
>UNIPROTKB|O43300 [details] [associations]
symbol:LRRTM2 "Leucine-rich repeat transmembrane neuronal
protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0042043 "neurexin family protein binding" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0060076
"excitatory synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 UniGene:Hs.656653 CleanEx:HS_LRRN2
HOGENOM:HOG000290681 HOVERGEN:HBG052362 EMBL:AY182026 EMBL:AB007876
EMBL:AK291064 EMBL:BC126408 EMBL:BC126410 EMBL:BC143926
IPI:IPI00023576 RefSeq:NP_056379.1 ProteinModelPortal:O43300
SMR:O43300 STRING:O43300 PhosphoSite:O43300 PRIDE:O43300
DNASU:26045 Ensembl:ENST00000274711 GeneID:26045 KEGG:hsa:26045
UCSC:uc011cyz.1 CTD:26045 GeneCards:GC05M138205 HGNC:HGNC:19409
HPA:HPA017323 MIM:610868 neXtProt:NX_O43300 PharmGKB:PA134993038
InParanoid:O43300 OMA:IRQCSMI OrthoDB:EOG4PG60Z GenomeRNAi:26045
NextBio:47883 ArrayExpress:O43300 Bgee:O43300 CleanEx:HS_LRRTM2
Genevestigator:O43300 Uniprot:O43300
Length = 516
Score = 125 (49.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 44/168 (26%), Positives = 73/168 (43%)
Query: 18 VYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
+Y M +V + CP C C+ K C ++ F ++P D G+ L L N
Sbjct: 17 IYAMSMVLKMLPALGMACPPKCRCE----KLLFYCDSQGFHSVPNATDKGSLGLSLRHNH 72
Query: 78 ---LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
L+R F L L L +NQI V + +L+EL LS N I + + F +
Sbjct: 73 ITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQL 132
Query: 135 PKLNLEDFACSPN-IRPITPDVTAEENENVTLSCRATG-SPVP-KIKW 179
+NL++ S N + + P++ + TL R+ +P ++ W
Sbjct: 133 --INLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFW 178
Score = 59 (25.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 26/113 (23%), Positives = 45/113 (39%)
Query: 207 NSLSNLTIVAVTMSDSGI-YTCRAKN-----GAGEVFTNISLNVIKVETAVAQPDPVYLV 260
N + +T++A T D YT R + G E+ T + + E +PD
Sbjct: 362 NLSTTVTVMATTYRDPTTEYTKRISSSSYHVGDKEIPTTAGI-AVTTEEHFPEPDNAIFT 420
Query: 261 ASLTTVVTIILTACFVVLCIILLKAKRKRYADVNRRYLEDKCESNHQQSKPLT 313
+ T +L + F ++ I+ + RK RR + NH+Q + T
Sbjct: 421 QRVITGTMALLFSFFFIIFIVFIS--RKCCPPTLRRIRQCSMVQNHRQLRSQT 471
>UNIPROTKB|A6H793 [details] [associations]
symbol:LRRC3 "Leucine-rich repeat-containing protein 3"
species:9913 "Bos taurus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00390000003913
HOGENOM:HOG000073532 HOVERGEN:HBG052349 EMBL:BC146159
IPI:IPI00854410 RefSeq:NP_001092354.1 UniGene:Bt.16596
ProteinModelPortal:A6H793 Ensembl:ENSBTAT00000023769 GeneID:506054
KEGG:bta:506054 CTD:81543 eggNOG:NOG318731 InParanoid:A6H793
OMA:HCECALQ OrthoDB:EOG48PMM1 NextBio:20867427 Uniprot:A6H793
Length = 257
Score = 135 (52.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 36/107 (33%), Positives = 52/107 (48%)
Query: 28 CLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFR 84
CL++ A CP C+C G V C A+ +P + T +L L N + R F+
Sbjct: 26 CLRLGASCPQNCQCPDHAGAVAVHCSARGLQEVPRDIPADTVLLKLDANKIARIPNGAFQ 85
Query: 85 KLINLVELDLSYNQIQFV-PSHILDSILELRELKLSGNPIQKITHEA 130
L L ELDLS N I+ + P+ LR L LS N +++I +A
Sbjct: 86 HLHQLRELDLSQNAIETIGPAAFSGLAGGLRLLDLSHNRLRRIPKDA 132
>MGI|MGI:2177651 [details] [associations]
symbol:Vasn "vasorin" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0071456 "cellular response
to hypoxia" evidence=IMP] [GO:0071461 "cellular response to redox
state" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00008 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
SMART:SM00181 MGI:MGI:2177651 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0071461
SUPFAM:SSF49265 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0071456 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 CTD:114990 eggNOG:NOG273568
HOGENOM:HOG000261606 HOVERGEN:HBG084318 OMA:VTQLRPN
OrthoDB:EOG4GTKD4 EMBL:AJ458938 EMBL:AK012169 EMBL:AK083684
EMBL:AK132325 EMBL:BC050274 IPI:IPI00321074 RefSeq:NP_647468.2
UniGene:Mm.482140 ProteinModelPortal:Q9CZT5 SMR:Q9CZT5
PhosphoSite:Q9CZT5 PaxDb:Q9CZT5 PRIDE:Q9CZT5
Ensembl:ENSMUST00000038770 GeneID:246154 KEGG:mmu:246154
UCSC:uc007xzz.2 InParanoid:Q9CZT5 NextBio:387103 Bgee:Q9CZT5
Genevestigator:Q9CZT5 GermOnline:ENSMUSG00000039646 Uniprot:Q9CZT5
Length = 673
Score = 143 (55.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 42/123 (34%), Positives = 59/123 (47%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLD---VGTQVLDLSDNFLDRYTFRKLINLVE 91
CPS C+C +TV C A+ TT+P + VG + + LD F L L
Sbjct: 25 CPSGCQCNQP---QTVFCTARQGTTVPRDVPPDTVGLYIFENGITTLDVGCFAGLPGLQL 81
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPN-IRP 150
LDLS NQI +P I ++ L L L+ N + +I++E F + +L E N IR
Sbjct: 82 LDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHEISNETFRGLRRL--ERLYLGKNRIRH 139
Query: 151 ITP 153
I P
Sbjct: 140 IQP 142
Score = 41 (19.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 20/80 (25%), Positives = 32/80 (40%)
Query: 205 TINSLS-NLTI-VAVTMSDSGIYTCRAKNGAGEVFTN--ISLNVIKVETAVAQPDPVYLV 260
T+ L N T + VT +G T + GE T+ + N V A P+ +
Sbjct: 522 TVTQLRPNATYSICVTPLGAG-RTPEGEEACGEANTSQAVRSNHAPVTQAREGNLPLLIA 580
Query: 261 ASLTTVVTIILTACFVVLCI 280
+L V+ +L A C+
Sbjct: 581 PALAAVLLAVLAAAGAAYCV 600
>FB|FBgn0021764 [details] [associations]
symbol:sdk "sidekick" species:7227 "Drosophila melanogaster"
[GO:0050931 "pigment cell differentiation" evidence=IMP]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=IMP] [GO:0042675 "compound eye cone cell
differentiation" evidence=IMP] [GO:0005887 "integral to plasma
membrane" evidence=NAS] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014298
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 eggNOG:NOG12793 InterPro:IPR013098
Pfam:PF07679 GO:GO:0042675 GO:GO:0046533 EMBL:AL132792
GO:GO:0050931 KO:K16353 OMA:INLTWAQ EMBL:U88578 EMBL:BT031329
PIR:T13924 RefSeq:NP_001162630.1 RefSeq:NP_001162631.1
RefSeq:NP_477289.5 RefSeq:NP_477290.6 RefSeq:NP_599141.5
RefSeq:NP_599142.5 UniGene:Dm.4732 ProteinModelPortal:O97394
SMR:O97394 DIP:DIP-20914N MINT:MINT-322425 PRIDE:O97394
GeneID:31017 KEGG:dme:Dmel_CG5227 UCSC:CG5227-RA CTD:31017
FlyBase:FBgn0021764 InParanoid:O97394 OrthoDB:EOG4WSTRB ChiTaRS:sdk
GenomeRNAi:31017 NextBio:771519 Bgee:O97394 Uniprot:O97394
Length = 2224
Score = 147 (56.8 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 43/126 (34%), Positives = 62/126 (49%)
Query: 145 SPNIRPITP-DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYII 203
S I + P +VTA + ++ T+SCRA GSP P I WI+ E + +ISS + + +I
Sbjct: 453 SAPIMELPPQNVTALDGKDATISCRAVGSPNPNITWIYNETQLVDISSRVQILESGDLLI 512
Query: 204 KTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASL 263
I S+ D+G+Y C N AG V L+V+ V T + QP PV L
Sbjct: 513 SNIRSV-----------DAGLYICVRANEAGSVKGEAYLSVL-VRTQIIQP-PVDTTVLL 559
Query: 264 TTVVTI 269
T+
Sbjct: 560 GLTATL 565
>ZFIN|ZDB-GENE-060929-856 [details] [associations]
symbol:zgc:152904 "zgc:152904" species:7955 "Danio
rerio" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-060929-856
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679 eggNOG:NOG308439
KO:K06491 HOGENOM:HOG000074124 HOVERGEN:HBG052579 EMBL:BC124170
IPI:IPI00769579 RefSeq:NP_001070212.1 UniGene:Dr.151295
ProteinModelPortal:Q08CM9 SMR:Q08CM9 GeneID:767777 KEGG:dre:767777
NextBio:20918159 Uniprot:Q08CM9
Length = 809
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 136 KLNLEDFACSPNIRPI--TP----DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANI 189
+++ D N+ P+ P + TA+ E+VT +C +GSP P++ W +K
Sbjct: 164 EIDFRDIVVQVNVPPVLSVPQQSFNATADYQESVTFTCVTSGSPDPQVTWYWK------- 216
Query: 190 SSGLANMNKRQYIIKTINS-LSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVE 248
G A + QY++ T+N S LT+ + +D G Y CRA N AG + + L V V+
Sbjct: 217 --GHAIEHSEQYVLNTMNGGKSTLTVKNIKQTDGGPYMCRASNKAGSSESQLFLKVF-VQ 273
Query: 249 TAVAQ 253
+ Q
Sbjct: 274 PHITQ 278
>UNIPROTKB|A6H789 [details] [associations]
symbol:LRRC3B "Leucine-rich repeat-containing protein 3B"
species:9913 "Bos taurus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:BC146155 IPI:IPI00703029
RefSeq:NP_001092865.1 UniGene:Bt.10353 ProteinModelPortal:A6H789
Ensembl:ENSBTAT00000047081 GeneID:783571 KEGG:bta:783571 CTD:116135
eggNOG:NOG282117 GeneTree:ENSGT00390000003913 HOGENOM:HOG000073532
HOVERGEN:HBG052349 InParanoid:A6H789 OMA:PDEADDI OrthoDB:EOG4X3H20
NextBio:20900933 Uniprot:A6H789
Length = 259
Score = 133 (51.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 38/111 (34%), Positives = 49/111 (44%)
Query: 28 CLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFR 84
C + CP C C GG V C N IP L T +L L N + F+
Sbjct: 27 CFHSASMCPKGCLCSSSGGLN-VTCSNANLKEIPRDLPPETVLLYLDSNQITSIPNEIFK 85
Query: 85 KLINLVELDLSYNQIQFVPSHILDSILE-LRELKLSGNPIQKITHEAFINV 134
L L L+LS N I+F+ H + E L+ L LS N IQ + AF N+
Sbjct: 86 DLHQLRVLNLSKNGIEFIDEHAFKGVAETLQTLDLSDNRIQSVHKNAFNNL 136
>UNIPROTKB|Q96PB8 [details] [associations]
symbol:LRRC3B "Leucine-rich repeat-containing protein 3B"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 CTD:116135 eggNOG:NOG282117
HOGENOM:HOG000073532 HOVERGEN:HBG052349 OMA:PDEADDI
OrthoDB:EOG4X3H20 EMBL:AF396933 EMBL:AY358282 EMBL:BC040656
EMBL:BC067784 EMBL:BC087849 IPI:IPI00044336 RefSeq:NP_443185.1
UniGene:Hs.517868 ProteinModelPortal:Q96PB8 SMR:Q96PB8
STRING:Q96PB8 PhosphoSite:Q96PB8 DMDM:24211927 PRIDE:Q96PB8
DNASU:116135 Ensembl:ENST00000396641 Ensembl:ENST00000417744
Ensembl:ENST00000456208 GeneID:116135 KEGG:hsa:116135
UCSC:uc003cdp.3 GeneCards:GC03P026640 HGNC:HGNC:28105 HPA:HPA015568
neXtProt:NX_Q96PB8 PharmGKB:PA134962068 InParanoid:Q96PB8
PhylomeDB:Q96PB8 GenomeRNAi:116135 NextBio:79780
ArrayExpress:Q96PB8 Bgee:Q96PB8 CleanEx:HS_LRRC3B
Genevestigator:Q96PB8 GermOnline:ENSG00000179796 Uniprot:Q96PB8
Length = 259
Score = 133 (51.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 38/111 (34%), Positives = 49/111 (44%)
Query: 28 CLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFR 84
C + CP C C GG V C N IP L T +L L N + F+
Sbjct: 27 CFHSASMCPKGCLCSSSGGLN-VTCSNANLKEIPRDLPPETVLLYLDSNQITSIPNEIFK 85
Query: 85 KLINLVELDLSYNQIQFVPSHILDSILE-LRELKLSGNPIQKITHEAFINV 134
L L L+LS N I+F+ H + E L+ L LS N IQ + AF N+
Sbjct: 86 DLHQLRVLNLSKNGIEFIDEHAFKGVAETLQTLDLSDNRIQSVHKNAFNNL 136
>MGI|MGI:2384996 [details] [associations]
symbol:Lrrc3b "leucine rich repeat containing 3B"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2384996 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
CTD:116135 eggNOG:NOG282117 GeneTree:ENSGT00390000003913
HOGENOM:HOG000073532 HOVERGEN:HBG052349 OMA:PDEADDI
OrthoDB:EOG4X3H20 EMBL:BC019794 IPI:IPI00122153 RefSeq:NP_666164.1
UniGene:Mm.138039 ProteinModelPortal:Q8VCH9 SMR:Q8VCH9
PhosphoSite:Q8VCH9 PRIDE:Q8VCH9 Ensembl:ENSMUST00000055211
Ensembl:ENSMUST00000163937 GeneID:218763 KEGG:mmu:218763
InParanoid:Q8VCH9 NextBio:376405 Bgee:Q8VCH9 CleanEx:MM_LRRC3B
Genevestigator:Q8VCH9 GermOnline:ENSMUSG00000045201 Uniprot:Q8VCH9
Length = 259
Score = 133 (51.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 38/111 (34%), Positives = 49/111 (44%)
Query: 28 CLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFR 84
C + CP C C GG V C N IP L T +L L N + F+
Sbjct: 27 CFHSASMCPKGCLCSSSGGLN-VTCSNANLKEIPRDLPPETVLLYLDSNQITSIPNEIFK 85
Query: 85 KLINLVELDLSYNQIQFVPSHILDSILE-LRELKLSGNPIQKITHEAFINV 134
L L L+LS N I+F+ H + E L+ L LS N IQ + AF N+
Sbjct: 86 DLHQLRVLNLSKNGIEFIDEHAFKGVAETLQTLDLSDNRIQSVHKNAFNNL 136
>ZFIN|ZDB-GENE-080327-14 [details] [associations]
symbol:lrrtm4l2 "leucine rich repeat transmembrane
neuronal 4 like 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-14 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042802
InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG052362 EMBL:CU468765
IPI:IPI00876678 UniGene:Dr.110767 IntAct:A8BB35 STRING:A8BB35
Uniprot:A8BB35
Length = 445
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 40/110 (36%), Positives = 54/110 (49%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRKLINLVE 91
CP +C C+ GK V C++ F +PE + +G Q L L N L Y F L LV
Sbjct: 30 CPVSCRCE---GK-IVYCESGGFQDVPENISLGCQGLSLRYNSLLLLLPYQFAHLNQLVW 85
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL-NLE 140
L L +N I V + L+EL LS N I ++ + F VP L NL+
Sbjct: 86 LYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNGTFETVPNLRNLD 135
>RGD|1598149 [details] [associations]
symbol:Vasn "vasorin" species:10116 "Rattus norvegicus"
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0071456 "cellular response to hypoxia"
evidence=ISO] [GO:0071461 "cellular response to redox state"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 SMART:SM00181 RGD:1598149
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00700000104056
CTD:114990 OMA:VTQLRPN OrthoDB:EOG4GTKD4 EMBL:CH474017
IPI:IPI00204993 RefSeq:NP_001102852.1 UniGene:Rn.198255
Ensembl:ENSRNOT00000005490 GeneID:679921 KEGG:rno:679921
UCSC:RGD:1598149 NextBio:717547 Uniprot:D3ZAE6
Length = 673
Score = 140 (54.3 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 45/138 (32%), Positives = 67/138 (48%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLD---VGTQVLDLSDN 76
++VL+ +G +Q CPS C+C +TV C A+ TT+P + VG + +
Sbjct: 14 LLVLLGSG-VQ---SCPSGCQCNQP---QTVFCTARQGTTVPRDVPPDTVGLYIFENGIT 66
Query: 77 FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
LD F L LDLS NQI +P I ++ L L L+ N + +I++E F + +
Sbjct: 67 TLDVGCFAGFPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHEISNETFRGLRR 126
Query: 137 LNLEDFACSPN-IRPITP 153
L E N IR I P
Sbjct: 127 L--ERLYLGKNRIRHIQP 142
Score = 42 (19.8 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 21/80 (26%), Positives = 32/80 (40%)
Query: 205 TINSLS-NLTI-VAVTMSDSGIYTCRAKNGAGEVFTN--ISLNVIKVETAVAQPDPVYLV 260
T+ L N T + VT +G T + GE T + N V A P+ +
Sbjct: 522 TVTQLRPNATYSICVTALGAG-RTPEGEEACGEANTPQAVRSNHAPVTQAREGNLPLLIA 580
Query: 261 ASLTTVVTIILTACFVVLCI 280
+L V+ +L A V C+
Sbjct: 581 PALAAVLLAVLAASGAVYCV 600
>UNIPROTKB|A6H701 [details] [associations]
symbol:LRRTM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104056
HOGENOM:HOG000290681 HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI
OrthoDB:EOG4PG60Z EMBL:DAAA02020406 EMBL:BC146061 IPI:IPI00709063
RefSeq:NP_001092847.1 UniGene:Bt.55901 Ensembl:ENSBTAT00000018866
GeneID:520949 KEGG:bta:520949 InParanoid:A6H701 NextBio:20873206
Uniprot:A6H701
Length = 516
Score = 125 (49.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 44/168 (26%), Positives = 73/168 (43%)
Query: 18 VYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
+Y M +V + CP C C+ K C ++ F ++P D G+ L L N
Sbjct: 17 IYAMSMVLKMLPALGMACPPKCRCE----KLLFYCDSQGFHSVPNTTDKGSLGLSLRHNH 72
Query: 78 ---LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
L+R F L L L +NQI V + +L+EL LS N I + + F +
Sbjct: 73 ITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQL 132
Query: 135 PKLNLEDFACSPN-IRPITPDVTAEENENVTLSCRATG-SPVP-KIKW 179
+NL++ S N + + P++ + TL R+ +P ++ W
Sbjct: 133 --INLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFW 178
Score = 55 (24.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 26/113 (23%), Positives = 44/113 (38%)
Query: 207 NSLSNLTIVAVTMSDSGI-YTCRAKN-----GAGEVFTNISLNVIKVETAVAQPDPVYLV 260
N + +T +A T D YT R + G E+ T + + E +PD
Sbjct: 362 NLSTTVTAMATTYKDPTTEYTKRISSSSYHVGDKEIPTTAGI-AVTTEEHFPEPDNAIFT 420
Query: 261 ASLTTVVTIILTACFVVLCIILLKAKRKRYADVNRRYLEDKCESNHQQSKPLT 313
+ T +L + F ++ I+ + RK RR + NH+Q + T
Sbjct: 421 QRVITGTMALLFSFFFIIFIVFIS--RKCCPPTLRRIRQCSMIQNHRQLRSQT 471
>MGI|MGI:106038 [details] [associations]
symbol:Lrrn1 "leucine rich repeat protein 1, neuronal"
species:10090 "Mus musculus" [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
MGI:MGI:106038 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:D45913 EMBL:AK173186 EMBL:AK139355
EMBL:AK139965 EMBL:AK160841 EMBL:BC031122 EMBL:BC058701
IPI:IPI00126070 RefSeq:NP_032542.1 UniGene:Mm.428543
UniGene:Mm.488119 ProteinModelPortal:Q61809 SMR:Q61809
STRING:Q61809 PaxDb:Q61809 PRIDE:Q61809 Ensembl:ENSMUST00000049285
GeneID:16979 KEGG:mmu:16979 UCSC:uc009ddd.1 InParanoid:Q61809
ChiTaRS:LRRN1 NextBio:291056 Bgee:Q61809 CleanEx:MM_LRRN1
Genevestigator:Q61809 GermOnline:ENSMUSG00000034648 Uniprot:Q61809
Length = 716
Score = 106 (42.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 35/106 (33%), Positives = 48/106 (45%)
Query: 33 AECPSTCECK---W----KGGKE--TVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYT- 82
+ECP C C+ W +E TV C T IP L TQVL L N + +
Sbjct: 30 SECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPGNLSSDTQVLLLQSNNIAKTVD 89
Query: 83 -FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
++L NL ELD S N + L ++ +L L L N I ++T
Sbjct: 90 ELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMT 135
Score = 85 (35.0 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 28/90 (31%), Positives = 44/90 (48%)
Query: 56 NFTTIPEQ-LDVGTQV--LDLSDNFLDR---YTFRKLINLVELDLSYNQIQFVPSHILDS 109
NFT I E L TQ+ L L +N + Y + L NL EL +++NQI + ++
Sbjct: 106 NFTNIKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYINHNQISTISANAFSG 165
Query: 110 ILELRELKLSGNPIQKITHEAFINVPKLNL 139
+ L L L+ N ++ I F + P L +
Sbjct: 166 LKNLLRLHLNSNKLKVIDSRWFDSTPNLEI 195
Score = 79 (32.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 144 CSPNIRPIT-PD-VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQY 201
C P I T P+ + + + L CRA P P+I W+ I N + + ++ + Y
Sbjct: 422 CLPMISHDTFPNHLNMDIGTTLFLDCRAMAEPEPEIYWVTP---IGNKIT-VETLSDK-Y 476
Query: 202 IIKTINSLSNLTIVAVTMSDSGIYTCRAKN--GAGEVFTNISLN 243
++S L I + + DSG YTC A+N GA I +N
Sbjct: 477 ---KLSSEGTLEIANIQIEDSGRYTCVAQNVQGADTRVATIKVN 517
>RGD|1564145 [details] [associations]
symbol:Lrrn1 "leucine rich repeat neuronal 1" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 RGD:1564145 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:BC107902 IPI:IPI00191618
RefSeq:NP_001032440.1 UniGene:Rn.96330 ProteinModelPortal:Q32Q07
STRING:Q32Q07 PhosphoSite:Q32Q07 Ensembl:ENSRNOT00000008879
GeneID:500280 KEGG:rno:500280 UCSC:RGD:1564145 InParanoid:Q32Q07
NextBio:705687 Genevestigator:Q32Q07 GermOnline:ENSRNOG00000006802
Uniprot:Q32Q07
Length = 716
Score = 106 (42.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 35/106 (33%), Positives = 48/106 (45%)
Query: 33 AECPSTCECK---W----KGGKE--TVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYT- 82
+ECP C C+ W +E TV C T IP L TQVL L N + +
Sbjct: 30 SECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPGNLSSDTQVLLLQSNNIAKTVD 89
Query: 83 -FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
++L NL ELD S N + L ++ +L L L N I ++T
Sbjct: 90 ELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMT 135
Score = 85 (35.0 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 28/90 (31%), Positives = 44/90 (48%)
Query: 56 NFTTIPEQ-LDVGTQV--LDLSDNFLDR---YTFRKLINLVELDLSYNQIQFVPSHILDS 109
NFT I E L TQ+ L L +N + Y + L NL EL +++NQI + ++
Sbjct: 106 NFTNIKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYINHNQISSISANAFSG 165
Query: 110 ILELRELKLSGNPIQKITHEAFINVPKLNL 139
+ L L L+ N ++ I F + P L +
Sbjct: 166 LKNLLRLHLNSNKLKVIDSRWFDSTPNLEI 195
Score = 79 (32.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 144 CSPNIRPIT-PD-VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQY 201
C P I T P+ + + + L CRA P P+I W+ I N + + ++ + Y
Sbjct: 422 CLPMISHDTFPNHLNMDIGTTLFLDCRAMAEPEPEIYWVTP---IGNKIT-VETLSDK-Y 476
Query: 202 IIKTINSLSNLTIVAVTMSDSGIYTCRAKN--GAGEVFTNISLN 243
++S L I + + DSG YTC A+N GA I +N
Sbjct: 477 ---KLSSEGTLEIANIQIEDSGRYTCVAQNVQGADTRVATIKVN 517
>UNIPROTKB|Q6UXK5 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CleanEx:HS_LRRN1 CTD:57633 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE OrthoDB:EOG4XKV6G EMBL:AB074161
EMBL:AB040930 EMBL:AY358312 EMBL:BC034947 EMBL:AK023273
IPI:IPI00021485 RefSeq:NP_065924.3 UniGene:Hs.163244
ProteinModelPortal:Q6UXK5 SMR:Q6UXK5 STRING:Q6UXK5
PhosphoSite:Q6UXK5 DMDM:60390188 PaxDb:Q6UXK5 PRIDE:Q6UXK5
DNASU:57633 Ensembl:ENST00000319331 GeneID:57633 KEGG:hsa:57633
UCSC:uc003bpt.4 GeneCards:GC03P003816 HGNC:HGNC:20980 HPA:HPA011071
neXtProt:NX_Q6UXK5 PharmGKB:PA134935557 InParanoid:Q6UXK5
GenomeRNAi:57633 NextBio:64341 Bgee:Q6UXK5 Genevestigator:Q6UXK5
GermOnline:ENSG00000175928 Uniprot:Q6UXK5
Length = 716
Score = 107 (42.7 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 35/106 (33%), Positives = 48/106 (45%)
Query: 33 AECPSTCECK---W----KGGKE--TVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYT- 82
+ECP C C+ W +E TV C T IP L TQVL L N + +
Sbjct: 30 SECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPSNLSSDTQVLLLQSNNIAKTVD 89
Query: 83 -FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
++L NL ELD S N + L ++ +L L L N I ++T
Sbjct: 90 ELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMT 135
Score = 89 (36.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 56 NFTTIPEQ-LDVGTQV--LDLSDNFLDR---YTFRKLINLVELDLSYNQIQFVPSHILDS 109
NFT I E L TQ+ L L +N + Y + L NL EL +++NQI + +H
Sbjct: 106 NFTNIKEVGLANLTQLTTLHLEENQITEMTDYCLQDLSNLQELYINHNQISTISAHAFAG 165
Query: 110 ILELRELKLSGNPIQKITHEAFINVPKLNL 139
+ L L L+ N ++ I F + P L +
Sbjct: 166 LKNLLRLHLNSNKLKVIDSRWFDSTPNLEI 195
Score = 77 (32.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 163 VTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDS 222
V L CRA P P+I W+ I N + + ++ + Y ++S L I + + DS
Sbjct: 443 VFLDCRAMAEPEPEIYWVTP---IGNKIT-VETLSDK-Y---KLSSEGTLEISNIQIEDS 494
Query: 223 GIYTCRAKN--GAGEVFTNISLN 243
G YTC A+N GA I +N
Sbjct: 495 GRYTCVAQNVQGADTRVATIKVN 517
>FB|FBgn0011828 [details] [associations]
symbol:Pxn "Peroxidasin" species:7227 "Drosophila
melanogaster" [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0004601
"peroxidase activity" evidence=ISS] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS00436
PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835
SMART:SM00214 EMBL:AE014296 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 GO:GO:0005578 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0006909 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
Gene3D:1.10.640.10 HSSP:P05164 GeneTree:ENSGT00550000074325
CTD:5829 ChiTaRS:PXN EMBL:U11052 EMBL:AY051536 EMBL:AY052120
RefSeq:NP_523891.2 RefSeq:NP_728759.1 RefSeq:NP_995975.1
RefSeq:NP_995976.1 RefSeq:NP_995977.1 UniGene:Dm.8030
ProteinModelPortal:Q9VZZ4 SMR:Q9VZZ4 IntAct:Q9VZZ4
MINT:MINT-1680107 STRING:Q9VZZ4 PeroxiBase:3369 PeroxiBase:3370
PaxDb:Q9VZZ4 PRIDE:Q9VZZ4 EnsemblMetazoa:FBtr0072951
EnsemblMetazoa:FBtr0072952 EnsemblMetazoa:FBtr0072953
EnsemblMetazoa:FBtr0072954 GeneID:38326 KEGG:dme:Dmel_CG12002
FlyBase:FBgn0011828 InParanoid:Q9VZZ4 OMA:GGRYECQ OrthoDB:EOG4JWSV8
PhylomeDB:Q9VZZ4 GenomeRNAi:38326 NextBio:808033 Bgee:Q9VZZ4
Uniprot:Q9VZZ4
Length = 1527
Score = 110 (43.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD 79
+++L+ G V+ CP+ C C + TV C + +P+ L TQ LDL N ++
Sbjct: 13 LLLLLAGGVQSVY--CPAGCTCL----ERTVRCIRAKLSAVPK-LPQDTQTLDLRFNHIE 65
Query: 80 RY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
F L L L L+ N++ ++ L+ + LR + L+ N + ++ F +P+
Sbjct: 66 ELPANAFSGLAQLTTLFLNDNELAYLQDGALNGLTALRFVYLNNNRLSRLPATIFQRMPR 125
Query: 137 L 137
L
Sbjct: 126 L 126
Score = 81 (33.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/128 (25%), Positives = 51/128 (39%)
Query: 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT 205
P I T + + L C A G+P+P I W + + L N+
Sbjct: 458 PEILTAPQSQTIKLGKAFVLECDADGNPLPTIDWQLNGVPLPGNTPDLQLENEN------ 511
Query: 206 INSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQP----DPVYLVA 261
+ L + A +G+Y C A N GE T++ IKVE + + P +P LVA
Sbjct: 512 ----TELVVGAARQEHAGVYRCTAHNENGE--TSVEAT-IKVERSQSPPQLAIEPSNLVA 564
Query: 262 SLTTVVTI 269
T + +
Sbjct: 565 ITGTTIEL 572
Score = 69 (29.3 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 22/93 (23%), Positives = 36/93 (38%)
Query: 162 NVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSD 221
+V L C A+G P P I+W + + + L I+ N LS
Sbjct: 383 HVLLDCAASGWPQPDIQWFVNGRQLLQSTPSLQLQANGSLILLQPNQLS----------- 431
Query: 222 SGIYTCRAKNGAGEVFTNISLNVIKVETAVAQP 254
+G Y C A+N G V + + ++ + P
Sbjct: 432 AGTYRCEARNSLGSVQATARIELKELPEILTAP 464
>MGI|MGI:2385320 [details] [associations]
symbol:Lrit1 "leucine-rich repeat, immunoglobulin-like and
transmembrane domains 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=ISO] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:2385320
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0030176
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:26103 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 OMA:RRINEYF
OrthoDB:EOG42JNR2 EMBL:AK044631 EMBL:BC032270 IPI:IPI00279273
RefSeq:NP_666357.2 UniGene:Mm.37907 ProteinModelPortal:Q8K099
SMR:Q8K099 PhosphoSite:Q8K099 PRIDE:Q8K099
Ensembl:ENSMUST00000120052 GeneID:239037 KEGG:mmu:239037
UCSC:uc007tbr.2 InParanoid:Q8K099 NextBio:383963 Bgee:Q8K099
Genevestigator:Q8K099 GermOnline:ENSMUSG00000041044 Uniprot:Q8K099
Length = 624
Score = 137 (53.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 46/153 (30%), Positives = 69/153 (45%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWK----GGK-ETVLCKAKNFTTIPEQLDVGTQVLDLS 74
+ +L G Q + CPS C C + G K TV+C + T P + T L L
Sbjct: 8 LWLLALGGPHQAWGFCPSECSCSLRILSDGSKARTVVCSDPDLTLPPASIPPDTCKLRLE 67
Query: 75 DNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
+ R TFR L L +L L YN + + + +L + LREL+L GN + A
Sbjct: 68 RTAIRRVPGETFRPLSRLEQLWLPYNALSELSALMLRGLRRLRELRLPGNRLVTFPWAAL 127
Query: 132 INVPKLNLEDFACSPNIRPITPDVTAEENENVT 164
+ P+L L D + + + P+ A EN+T
Sbjct: 128 RDTPQLQLLDLQAN-RLSTLPPEA-AHFLENLT 158
Score = 113 (44.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 40/147 (27%), Positives = 64/147 (43%)
Query: 105 HILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFAC-SPNIRPITPDVTAEENENV 163
H+LD + + + ++ + + V LE C SP +RP + + V
Sbjct: 214 HLLDGWVSSNLIFIEAR-LRCASPRSLAGVAFSQLELRKCQSPELRPGVTSIISPLGSTV 272
Query: 164 TLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSG 223
L C ATG P P++ W + N Q + +S + L + V++ DSG
Sbjct: 273 LLRCGATGIPGPEMSW-------RRANGRPLNGTVHQEVSSDGSSWTLLDLPVVSLFDSG 325
Query: 224 IYTCRAKNGAGEVFTNISLNVIKVETA 250
Y C+AKN G T ISL V + +T+
Sbjct: 326 DYICQAKNFLGASETLISLIVTEPQTS 352
Score = 59 (25.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILD 108
Q+LDL N L L NL LDLS NQ+ +P +LD
Sbjct: 134 QLLDLQANRLSTLPPEAAHFLENLTFLDLSNNQLMRLPEELLD 176
>FB|FBgn0003137 [details] [associations]
symbol:Ppn "Papilin" species:7227 "Drosophila melanogaster"
[GO:0005604 "basement membrane" evidence=IDA] [GO:0005578
"proteinaceous extracellular matrix" evidence=NAS] [GO:0030198
"extracellular matrix organization" evidence=IMP] [GO:0005201
"extracellular matrix structural constituent" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0004867
"serine-type endopeptidase inhibitor activity" evidence=IEA]
InterPro:IPR002223 InterPro:IPR007110 InterPro:IPR008197
InterPro:IPR010294 InterPro:IPR010909 InterPro:IPR013273
Pfam:PF00014 Pfam:PF05986 Pfam:PF08686 PRINTS:PR00759
PRINTS:PR01857 PROSITE:PS50279 PROSITE:PS50835 PROSITE:PS50900
PROSITE:PS51390 SMART:SM00131 SMART:SM00217 EMBL:AE014297
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004867
GO:GO:0008270 InterPro:IPR003598 SMART:SM00408 GO:GO:0030198
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 GO:GO:0004222 GO:GO:0005604 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000884 Pfam:PF00090 SMART:SM00209
SUPFAM:SSF82895 PROSITE:PS50092 eggNOG:NOG242665 GO:GO:0005201
HSSP:P12111 SUPFAM:SSF57256 GeneTree:ENSGT00700000104482
EMBL:AF205357 EMBL:AF529179 EMBL:AF529180 EMBL:BT011127
RefSeq:NP_001163760.1 RefSeq:NP_001163761.1 RefSeq:NP_788751.2
RefSeq:NP_788752.2 UniGene:Dm.7007 ProteinModelPortal:Q868Z9
SMR:Q868Z9 IntAct:Q868Z9 MINT:MINT-330923 STRING:Q868Z9
PaxDb:Q868Z9 EnsemblMetazoa:FBtr0301837 GeneID:43872
KEGG:dme:Dmel_CG33103 UCSC:CG33103-RA CTD:43872 FlyBase:FBgn0003137
InParanoid:Q868Z9 OMA:GCCPDNI OrthoDB:EOG4Q5748 PhylomeDB:Q868Z9
GenomeRNAi:43872 NextBio:836259 Bgee:Q868Z9 GermOnline:CG33103
Uniprot:Q868Z9
Length = 2898
Score = 144 (55.7 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 43/116 (37%), Positives = 60/116 (51%)
Query: 165 LSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGI 224
L C ATG+P P I W K +I N NK +Y++ T N +LTIV V +D G
Sbjct: 2541 LRCFATGNPAPNITWSLKNLVI--------NTNKGRYVL-TANG--DLTIVQVRQTDDGT 2589
Query: 225 YTCRAKNGAGE-VFTNISLNVIKVETAVAQPDPVYLVASLTTVVTIILTACFVVLC 279
Y C A NG GE V ++L V + V+QP +Y ++T +V + A V+ C
Sbjct: 2590 YVCVASNGLGEPVRREVALQVTE---PVSQPAYIYGDKNVTQIVELNRPA--VIRC 2640
>UNIPROTKB|C9JEE2 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0007610 "behavior"
evidence=IEA] [GO:0035418 "protein localization to synapse"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
[GO:0060076 "excitatory synapse" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0007610 InterPro:IPR003591 SMART:SM00369
GO:GO:0050808 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
EMBL:AC016670 HGNC:HGNC:19408 IPI:IPI00916020
ProteinModelPortal:C9JEE2 SMR:C9JEE2 STRING:C9JEE2
Ensembl:ENST00000416268 ArrayExpress:C9JEE2 Bgee:C9JEE2
Uniprot:C9JEE2
Length = 223
Score = 128 (50.1 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 46/169 (27%), Positives = 73/169 (43%)
Query: 22 VLVCT--GCLQVFAECPSTCE--CKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
V++C C Q+ PS C C+ +G + C+A N T P L G L L N
Sbjct: 20 VVLCLLGACFQMLPAAPSGCPQLCRCEG--RLLYCEALNLTEAPHNLS-GLLGLSLRYNS 76
Query: 78 LDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
L F L+ L L L +N I V + ++EL LS N I ++ + F +
Sbjct: 77 LSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPM 136
Query: 135 PKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE 183
P L D + + ++ + PD+ + TL RA ++ IF++
Sbjct: 137 PNLRSVDLSYN-KLQALAPDLFHGLRKLTTLHMRANAIQFVPVR-IFQD 183
>RGD|735030 [details] [associations]
symbol:Igsf10 "immunoglobulin superfamily, member 10"
species:10116 "Rattus norvegicus" [GO:0001503 "ossification"
evidence=IDA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042246
"tissue regeneration" evidence=IDA] InterPro:IPR007110
PROSITE:PS50835 RGD:735030 GO:GO:0007275 GO:GO:0005576
GO:GO:0030154 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042246 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0001503 HSSP:Q9BZR6 CTD:285313 eggNOG:NOG239806
HOGENOM:HOG000113014 HOVERGEN:HBG107995 OrthoDB:EOG45MN4F
EMBL:AY273816 IPI:IPI00400618 RefSeq:NP_942063.1 UniGene:Rn.205647
ProteinModelPortal:Q6WRH9 STRING:Q6WRH9 PhosphoSite:Q6WRH9
PRIDE:Q6WRH9 GeneID:310448 KEGG:rno:310448 UCSC:RGD:735030
InParanoid:Q6WRH9 NextBio:662025 ArrayExpress:Q6WRH9
Genevestigator:Q6WRH9 Uniprot:Q6WRH9
Length = 2597
Score = 106 (42.4 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 34/126 (26%), Positives = 55/126 (43%)
Query: 121 NPIQKITHEAFINVPKLNLEDFACSPNI-RPITPDVTAEENENVTLSCRATGSPVPKIKW 179
NP K H ++++PK L+ P I T N +V L C A G P+P I W
Sbjct: 1603 NPTSK--HLPYVSLPKTLLK----KPRIIGGKAASFTVPANSDVFLPCEAVGDPLPIIHW 1656
Query: 180 IFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTN 239
++ + + R +++ L+I V++ D G Y C A N G +
Sbjct: 1657 T---RVSSGLEISQGTQKSRFHVLPN----GTLSIQRVSIQDRGQYLCSAFNPLGVDHFH 1709
Query: 240 ISLNVI 245
+SL+V+
Sbjct: 1710 VSLSVV 1715
Score = 98 (39.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 165 LSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVA--VTMSDS 222
+ C+A+GSPVP++ W + + N +A + Y K N T+ V M++
Sbjct: 2032 VDCKASGSPVPEVSWSLPDGTVLN---NVAQADDSGYRTKRYTLFHNGTLYFNNVGMAEE 2088
Query: 223 GIYTCRAKNGAGEVFTNISLNVIKVETAVAQ 253
G Y C A+N G+ + L V+ + Q
Sbjct: 2089 GDYICSAQNTLGKDEMKVHLTVLTAIPRIRQ 2119
Score = 98 (39.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 33/114 (28%), Positives = 51/114 (44%)
Query: 134 VPKLNLEDFACSPNIRPITPD-VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSG 192
+ KL L + P I P V + E ++L C + G P P +KW + G
Sbjct: 2394 IEKLILLEIGQKPVILTYEPGMVKSVSGEPLSLHCVSDGIPKPNVKWT---------TPG 2444
Query: 193 LANMNKRQYIIKTI-NSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVI 245
+++ Q K I + L I A T D G Y CRA+N G+ ++S+ V+
Sbjct: 2445 GHVIDRPQVDGKYILHENGTLVIKATTAHDQGNYICRAQNSVGQAVISVSVMVV 2498
Score = 95 (38.5 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 34/118 (28%), Positives = 54/118 (45%)
Query: 137 LNLEDFACSPNIRPITPDVTAEEN--ENVTLSCRATGSPVPKIKWIFKEKIIANISSGLA 194
L +E+ P I + T E N E + L+C ATG P P+I W K + +
Sbjct: 1906 LTVEEGETIPRIETASQKWT-EVNLGEKLLLNCSATGDPKPRIIWRLPSKAVID---QWH 1961
Query: 195 NMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE--VFTNISLNVI--KVE 248
M R ++ +L + +VT D+G Y C A+N G+ V ++ L + K+E
Sbjct: 1962 RMGSRIHVYPN----GSLVVGSVTEKDAGDYLCVARNKMGDDLVLMHVRLRLTPAKIE 2015
Score = 93 (37.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/120 (22%), Positives = 49/120 (40%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLT 213
++T V L CR G P P + WI + + S A +++ ++ L
Sbjct: 1728 EITVHFGSTVELKCRVEGMPRPTVSWILANQTVV---SETAKGSRKVWVTPD----GTLI 1780
Query: 214 IVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLTTVVTIILTA 273
I +++ D G Y C A N +G+ + + VI + + +V L + + TA
Sbjct: 1781 IYNLSLYDRGFYKCVASNPSGQDSLLVKIQVITAPPVIIEQKRQAIVGVLGGSLKLPCTA 1840
Score = 93 (37.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 33/127 (25%), Positives = 53/127 (41%)
Query: 120 GNPIQKITHEAFINVPKLNLEDFACSPNIRPITP-DVTAEENENVTLSCRATGSPVPKIK 178
GN I + + V +++ A P I P ++ E + L C A G P PK+
Sbjct: 2476 GNYICRAQNSVGQAVISVSVMVVAYPPRIINYLPRNMLRRTGEAMQLHCVALGIPKPKVT 2535
Query: 179 WIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFT 238
W + +S A R + ++ L I + SDSG+Y CRA+N G +
Sbjct: 2536 WETPRHSL--LSKATARKPHRS---EMLHPQGTLVIQNLQTSDSGVYKCRAQNLLGTDYA 2590
Query: 239 NISLNVI 245
+ V+
Sbjct: 2591 TTYIQVL 2597
Score = 90 (36.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 29/111 (26%), Positives = 45/111 (40%)
Query: 136 KLNLEDFACSPNIRP-ITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLA 194
K++L P IR + E L C TG P P + W+ + + S
Sbjct: 2105 KVHLTVLTAIPRIRQSYKTTMRLRAGETAVLDCEVTGEPKPNVFWLLPSNNVISFS---- 2160
Query: 195 NMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVI 245
N R T ++ L+I V DSG Y C A+N +G+ L+++
Sbjct: 2161 --NDRF----TFHANRTLSIHKVKPLDSGDYVCVAQNPSGDDTKTYKLDIV 2205
Score = 89 (36.4 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 31/106 (29%), Positives = 44/106 (41%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYT---FRKLINLVE 91
CP C C V C + T+IP+ + + ++L N L R T F L L
Sbjct: 29 CPRRCACYVP---TEVHCTFRYLTSIPDGIPANVERINLGYNSLTRLTENDFDGLSKLEL 85
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L L N I V + L+ LK+S N +Q I + F + L
Sbjct: 86 LMLHSNGIHRVSDKTFSGLQSLQVLKMSYNKVQIIRKDTFYGLGSL 131
Score = 87 (35.7 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 69 QVLDLSDN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
QVL +S N + + TF L +LV L L +N I+F+ + LR + L GN + K
Sbjct: 108 QVLKMSYNKVQIIRKDTFYGLGSLVRLHLDHNNIEFINPEAFYGLTSLRLVHLEGNRLTK 167
Query: 126 ITHEAFINVPKLNL 139
+ + F+++ L +
Sbjct: 168 LHPDTFVSLSYLQI 181
Score = 85 (35.0 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 29/100 (29%), Positives = 43/100 (43%)
Query: 156 TAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIV 215
T E + L C +TG P I WI + + S RQ + N+ L I+
Sbjct: 584 TVVTGETLDLPCLSTGVPDASISWILPGNTVFSQPS-----RDRQIL----NN-GTLRIL 633
Query: 216 AVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPD 255
VT D G Y C A N +G F++ ++V K + + D
Sbjct: 634 QVTPKDQGHYQCVAANPSGADFSSFKVSVQKKGQRMVEHD 673
>UNIPROTKB|F1NN41 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA]
[GO:0042744 "hydrogen peroxide catabolic process" evidence=IEA]
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 GO:GO:0005783 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030198 GO:GO:0020037 GO:GO:0031012 GO:GO:0004601
InterPro:IPR013098 Pfam:PF07679 GO:GO:0042744 SUPFAM:SSF48113
GO:GO:0005201 Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325
OMA:EPVITWN EMBL:AADN02002863 EMBL:AADN02002864 IPI:IPI00586612
Ensembl:ENSGALT00000026413 Uniprot:F1NN41
Length = 1416
Score = 105 (42.0 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 33/107 (30%), Positives = 46/107 (42%)
Query: 133 NVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISS 191
+V + E+ C P I DV V +CRA G+P P+I W+ N +
Sbjct: 168 SVATITPEELNCERPRITSEPQDVDVTSGNTVYFTCRAEGNPKPEIIWL------RNNNE 221
Query: 192 GLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFT 238
+ + R ++ L I +D GIY C AKN AGEV T
Sbjct: 222 LIMKEDSRLNLLDD----GTLMIQNTQETDQGIYQCMAKNVAGEVKT 264
Score = 97 (39.2 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 35/129 (27%), Positives = 57/129 (44%)
Query: 146 PNIRPI---TP-DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQY 201
P + P+ P D+T E NV + C A G P P I W K+ + SG +++ Y
Sbjct: 457 PRVTPVFASVPSDMTVEVGTNVQIPCSAQGEPEPVITWN-KDGVQVT-ESGKFHVSPEGY 514
Query: 202 IIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV-IKVETAVAQPDPVYLV 260
LTI V +D G Y C A+N G ++++S+ + + V DP
Sbjct: 515 ----------LTIRDVGTADEGRYECVARNTIG--YSSVSMVLSVNVPNVSRNGDPFVQT 562
Query: 261 ASLTTVVTI 269
+ + + T+
Sbjct: 563 SIVEAIATV 571
Score = 88 (36.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 31/89 (34%), Positives = 39/89 (43%)
Query: 148 IRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTIN 207
I P +V E+VTL C ATG P P+I W ++ + S + R TI
Sbjct: 282 IHPQNTEVLV--GESVTLECSATGHPQPQITWTKGDR--TPLPS-----DPRI----TIT 328
Query: 208 SLSNLTIVAVTMSDSGIYTCRAKNGAGEV 236
L I V DSG YTC A N G +
Sbjct: 329 PSGGLYIQNVKQEDSGEYTCFATNSIGNI 357
Score = 87 (35.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 36/124 (29%), Positives = 50/124 (40%)
Query: 151 ITP-DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSL 209
+TP D T E + V C A G P P I W K G ++++R ++ S
Sbjct: 373 VTPQDKTVIEGQTVDFPCEAQGYPQPVIAWT-K-------GGGQLSVDRRHLVL----SS 420
Query: 210 SNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLTTVVTI 269
L I V + D G Y C+A N G + L V T V P + + T V I
Sbjct: 421 GTLRISRVALHDQGQYECQAVNIIGSQRIVVYLTVQPRVTPVFASVPSDMTVEVGTNVQI 480
Query: 270 ILTA 273
+A
Sbjct: 481 PCSA 484
Score = 84 (34.6 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
FR+L NL L L+ NQI+ +PS + + L+ L L N IQ I +AF + L
Sbjct: 18 FRRLKNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKGLASL 72
Score = 75 (31.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 73 LSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHE 129
L++N + R F L NL L L N+IQ + + L +L L N I+ + E
Sbjct: 29 LNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQIETLDPE 88
Query: 130 AFINVPKL 137
+F ++PKL
Sbjct: 89 SFTHLPKL 96
>UNIPROTKB|Q9HBL6 [details] [associations]
symbol:LRTM1 "Leucine-rich repeat and transmembrane
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
HSSP:Q9BZR6 eggNOG:KOG0619 EMBL:AF225421 EMBL:BC040732
EMBL:BC074741 IPI:IPI00010227 IPI:IPI00478406 RefSeq:NP_065729.1
UniGene:Hs.591668 ProteinModelPortal:Q9HBL6 SMR:Q9HBL6
STRING:Q9HBL6 DMDM:74761612 PRIDE:Q9HBL6 Ensembl:ENST00000273286
Ensembl:ENST00000493075 GeneID:57408 KEGG:hsa:57408 UCSC:uc003dhl.3
CTD:57408 GeneCards:GC03M054928 H-InvDB:HIX0003383 HGNC:HGNC:25023
HPA:HPA013839 neXtProt:NX_Q9HBL6 PharmGKB:PA142671499
HOGENOM:HOG000290674 HOVERGEN:HBG067803 InParanoid:Q9HBL6
OMA:CLMMLAA OrthoDB:EOG42JNS0 PhylomeDB:Q9HBL6 GenomeRNAi:57408
NextBio:63528 Bgee:Q9HBL6 CleanEx:HS_LRTM1 Genevestigator:Q9HBL6
Uniprot:Q9HBL6
Length = 345
Score = 131 (51.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 41/140 (29%), Positives = 62/140 (44%)
Query: 29 LQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRK 85
LQV CP C C+ V C + IP L T+ L L DN L + FR
Sbjct: 15 LQVVCSCPDKCYCQ--SSTNFVDCSQQGLAEIPSHLPPQTRTLHLQDNQIHHLPAFAFRS 72
Query: 86 LINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACS 145
+ L+ L+LS N + + + L+ L L+ N + + F ++P+L D + S
Sbjct: 73 VPWLMTLNLSNNSLSNLAPGAFHGLQHLQVLNLTQNSLLSLESRLFHSLPQLRELDLS-S 131
Query: 146 PNIRPITPDVTAEENENVTL 165
NI + P E EN+T+
Sbjct: 132 NNISHL-PTSLGETWENLTI 150
>UNIPROTKB|Q9NR99 [details] [associations]
symbol:MXRA5 "Matrix-remodeling-associated protein 5"
species:9606 "Homo sapiens" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HSSP:Q9BZR6 eggNOG:NOG239806 EMBL:AF245505 EMBL:AC004616
EMBL:BC011846 EMBL:BC064986 EMBL:BC080586 EMBL:AL049946
IPI:IPI00012347 PIR:T08678 RefSeq:NP_056234.2 UniGene:Hs.369422
ProteinModelPortal:Q9NR99 STRING:Q9NR99 PhosphoSite:Q9NR99
DMDM:117949607 PaxDb:Q9NR99 PRIDE:Q9NR99 Ensembl:ENST00000217939
Ensembl:ENST00000381114 GeneID:25878 KEGG:hsa:25878 UCSC:uc004crg.4
CTD:25878 GeneCards:GC0XM003220 H-InvDB:HIX0016637 HGNC:HGNC:7539
HPA:HPA000508 neXtProt:NX_Q9NR99 PharmGKB:PA31340
HOGENOM:HOG000168306 InParanoid:Q9NR99 OMA:GALMTPN
OrthoDB:EOG4B5P48 PhylomeDB:Q9NR99 GenomeRNAi:25878 NextBio:47288
Bgee:Q9NR99 CleanEx:HS_MXRA5 Genevestigator:Q9NR99
GermOnline:ENSG00000101825 Uniprot:Q9NR99
Length = 2828
Score = 115 (45.5 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 29/100 (29%), Positives = 46/100 (46%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLT 213
DVT + + + C A G+P P+I WIF ++ + S + T++ L+
Sbjct: 1959 DVTVYLGDTIAMECLAKGTPAPQISWIFPDRRVWQTVSPVEGRI-------TLHENRTLS 2011
Query: 214 IVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQ 253
I + SD G+Y C A N AG I L+V + + Q
Sbjct: 2012 IKEASFSDRGVYKCVASNAAGADSLAIRLHVAALPPVIHQ 2051
Score = 111 (44.1 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 36/105 (34%), Positives = 49/105 (46%)
Query: 145 SPNIRPITPD-VTAEEN--ENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQY 201
SP+ +P D VT +N E+VTL C A P + WI + I N LAN + Y
Sbjct: 574 SPSTQPAEKDTVTIGKNPGESVTLPCNALAIPEAHLSWILPNRRIIN---DLANTS-HVY 629
Query: 202 IIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIK 246
++ L+I V +SDSG Y C A N G + + V K
Sbjct: 630 MLPN----GTLSIPKVQVSDSGYYRCVAVNQQGADHFTVGITVTK 670
Score = 107 (42.7 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 150 PITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSL 209
PI+ +TA ++L+C A G+P P + W+ ++ SG + Q + +
Sbjct: 2547 PISEKITAMAGHTISLNCSAAGTPTPSLVWVLPNG--TDLQSG----QQLQRFYHKADGM 2600
Query: 210 SNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV-IKVE 248
L I ++ D+G Y C A+N AG +SL V +K E
Sbjct: 2601 --LHISGLSSVDAGAYRCVARNAAGHTERLVSLKVGLKPE 2638
Score = 104 (41.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 31/102 (30%), Positives = 46/102 (45%)
Query: 163 VTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDS 222
VT++C A G P+PK+ W+ + SS K Q I L I SDS
Sbjct: 2364 VTVACEAKGEPMPKVTWLSPTNKVIPTSS-----EKYQ-----IYQDGTLLIQKAQRSDS 2413
Query: 223 GIYTCRAKNGAGEVFTNISLNV-IKVETAVAQPDPVYLVASL 263
G YTC +N AGE + ++V ++ P+P+ V +
Sbjct: 2414 GNYTCLVRNSAGEDRKTVWIHVNVQPPKINGNPNPITTVREI 2455
Score = 100 (40.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 136 KLNLEDFACSPNIRPITPDVT-AEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLA 194
+LN++ A + I +P T + L C A+G P P+I W K + L
Sbjct: 2136 QLNVQRAAANARITGTSPRRTDVRYGGTLKLDCSASGDPWPRILWRLPSK---RMIDALF 2192
Query: 195 NMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVI 245
+ + R IK + L + +VT D+G Y C A+N G+ + + ++V+
Sbjct: 2193 SFDSR---IKVFAN-GTLVVKSVTDKDAGDYLCVARNKVGDDYVVLKVDVV 2239
Score = 78 (32.5 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 28/126 (22%), Positives = 51/126 (40%)
Query: 16 WRVYIMVLVCT-GCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
W +VL+ G +V CP C C V C ++ ++P + + ++L
Sbjct: 7 WGALSVVLILLWGHPRVALACPHPCACYVPS---EVHCTFRSLASVPAGIAKHVERINLG 63
Query: 75 DNFLDRYTFRKLINLVELDLSY---NQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
N + + L +L+L N+I +P L + L+ K S N ++ IT +
Sbjct: 64 FNSIQALSETSFAGLTKLELLMIHGNEIPSIPDGALRDLSSLQVFKFSYNKLRVITGQTL 123
Query: 132 INVPKL 137
+ L
Sbjct: 124 QGLSNL 129
Score = 75 (31.5 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 24/90 (26%), Positives = 42/90 (46%)
Query: 48 ETVLCKAKNFTTIPEQL--DVGT-QVLDLSDNFL---DRYTFRKLINLVELDLSYNQIQF 101
E ++ +IP+ D+ + QV S N L T + L NL+ L + +N+I+F
Sbjct: 82 ELLMIHGNEIPSIPDGALRDLSSLQVFKFSYNKLRVITGQTLQGLSNLMRLHIDHNKIEF 141
Query: 102 VPSHILDSILELRELKLSGNPIQKITHEAF 131
+ + + LR L L GN + ++ F
Sbjct: 142 IHPQAFNGLTSLRLLHLEGNLLHQLHPSTF 171
Score = 62 (26.9 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 84 RKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNL 139
R L +L SYN+++ + L + L L + N I+ I +AF + L L
Sbjct: 100 RDLSSLQVFKFSYNKLRVITGQTLQGLSNLMRLHIDHNKIEFIHPQAFNGLTSLRL 155
Score = 45 (20.9 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 235 EVFTNISLNVIKVETAVAQPDPVYLVAS-LTTVVTIILT 272
E ++ +L+ IKVE A +Q + L L T V I+L+
Sbjct: 1436 EAGSSTTLSSIKVEVASSQAETTTLDQDHLETTVAILLS 1474
>ZFIN|ZDB-GENE-050522-43 [details] [associations]
symbol:vasna "vasorin a" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR003961 PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 SMART:SM00181 ZFIN:ZDB-GENE-050522-43
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG084318 EMBL:AY838878 IPI:IPI01006442 UniGene:Dr.83310
ProteinModelPortal:Q3MKM9 IntAct:Q3MKM9 InParanoid:Q3MKM9
Uniprot:Q3MKM9
Length = 688
Score = 135 (52.6 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 47/159 (29%), Positives = 72/159 (45%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQL-DVGTQVLDLSD--N 76
++ L+C GCL + CP C C + C +N +P L G Q+ + N
Sbjct: 12 LLQLLC-GCLS--SRCPHDCTCL---PSNNIFCVQRNLIYMPRGLPSTGKQLYVFQNKIN 65
Query: 77 FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
L + F +L L LDLS N + +P + + L L LS N I I+ ++FI +
Sbjct: 66 ILQQQDFVELGELEMLDLSQNSLSEIPDGVFSPLSSLHNLDLSSNYITHISKDSFIGL-- 123
Query: 137 LNLEDFACSPNI-RPITPDVTAEENENVTLSCRATGSPV 174
+NLE NI + I P E EN+ L + G+ +
Sbjct: 124 VNLERLYLYSNIIQNIHP-AAFEGLENL-LELKLQGNQI 160
>UNIPROTKB|G3N3T6 [details] [associations]
symbol:NTRK3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007169 "transmembrane receptor protein tyrosine kinase
signaling pathway" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005030 "neurotrophin receptor activity" evidence=IEA]
[GO:0004714 "transmembrane receptor protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR007110 InterPro:IPR020446
InterPro:IPR020777 PRINTS:PR01939 PRINTS:PR01942 PROSITE:PS50835
GO:GO:0005524 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004714 InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
SMART:SM00082 GO:GO:0007169 GeneTree:ENSGT00700000104172
InterPro:IPR013098 Pfam:PF07679 GO:GO:0005030 EMBL:DAAA02052086
EMBL:DAAA02052087 EMBL:DAAA02052088 EMBL:DAAA02052089
Ensembl:ENSBTAT00000064547 OMA:EMNISQC Uniprot:G3N3T6
Length = 335
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 41/148 (27%), Positives = 68/148 (45%)
Query: 112 ELRELKLSGNPIQKITHEAFINVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRAT 170
E E KL+ + I+ + +P + C P I ++T E +N ++C +
Sbjct: 46 EQGEAKLNSQNLYCISADGS-QLPLFRMNISQCDLPEISVSHANLTVREGDNAVITCNGS 104
Query: 171 GSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLS-NLTIVAVTMSDSGI-YTCR 228
GSP+P + WI +GL ++N Q + N + NLT+V VT D+G TC
Sbjct: 105 GSPLPDVDWIV---------TGLQSINTHQTNLNWTNVHAINLTLVNVTSEDNGFTLTCI 155
Query: 229 AKNGAGEVFTNISLNVIKVETAVAQPDP 256
A+N G +++L V V+ +P
Sbjct: 156 AENVVGMSNASVALTVHYPPRVVSLEEP 183
>UNIPROTKB|B2ZI35 [details] [associations]
symbol:F11R "F11 receptor" species:9823 "Sus scrofa"
[GO:0030855 "epithelial cell differentiation" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005923 "tight
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0005923 InterPro:IPR013106 Pfam:PF07686 GO:GO:0030855
InterPro:IPR003596 SMART:SM00406 GeneTree:ENSGT00670000097525
CTD:50848 HOGENOM:HOG000247041 HOVERGEN:HBG000518 KO:K06089
OMA:SSPRVEW EMBL:CU137698 EMBL:EU670046 RefSeq:NP_001121916.1
UniGene:Ssc.44434 STRING:B2ZI35 Ensembl:ENSSSCT00000006979
GeneID:100127138 KEGG:ssc:100127138 Uniprot:B2ZI35
Length = 298
Score = 129 (50.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 35/124 (28%), Positives = 57/124 (45%)
Query: 153 PDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNK--RQYIIKTINSLS 210
P+V EN+ LSC +G P+++W F +I+S + NK Y + S S
Sbjct: 35 PEVRVAENKPAKLSCSYSGFSSPRVEWKFTH---GDITSLVCYNNKITASYENRVTFSAS 91
Query: 211 NLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLTTVVTII 270
+T +VT D+G YTC + G + +++N+I + V P V S T+
Sbjct: 92 GITFHSVTRKDTGTYTCMVSDEGGNTYGEVTVNLIVL---VPPSKPTISVPSSATIGNRA 148
Query: 271 LTAC 274
+ C
Sbjct: 149 VLTC 152
>UNIPROTKB|F1PBL5 [details] [associations]
symbol:NCAM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016020 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00680000099931 OMA:EPTISWY EMBL:AAEX03016454
EMBL:AAEX03016455 EMBL:AAEX03016456 Ensembl:ENSCAFT00000013401
Uniprot:F1PBL5
Length = 838
Score = 142 (55.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 36/84 (42%), Positives = 47/84 (55%)
Query: 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSN 211
T + TAE E +TLSCRA+GSP P I W K I N++ Y++K S +
Sbjct: 218 TFNATAERGEEMTLSCRASGSPEPSISWYRNGKFIEE--------NEK-YVLK--GSHTE 266
Query: 212 LTIVAVTMSDSGIYTCRAKNGAGE 235
LT+ + SD+G Y CRA N AGE
Sbjct: 267 LTVRNIINSDAGPYVCRATNKAGE 290
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 13/65 (20%), Positives = 28/65 (43%)
Query: 236 VFTNISLNVIKVETAVAQPDPVYLVASLTTVVTIILTACFVVLCIILLKAKRKRYADVNR 295
+F + L + + VA + L+ +T V + C +++CI +K +
Sbjct: 696 LFNGLGLGAV-IGLGVAA---LLLILVVTDVSCFFIRQCGLLMCITRRMCGKKSGSSGKS 751
Query: 296 RYLED 300
+ LE+
Sbjct: 752 KELEE 756
>UNIPROTKB|H9KV31 [details] [associations]
symbol:NCAM2 "Neural cell adhesion molecule 2" species:9606
"Homo sapiens" [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679
EMBL:AP001138 HGNC:HGNC:7657 ChiTaRS:NCAM2 EMBL:AP001114
EMBL:AP001115 EMBL:AP001136 EMBL:AP001137 EMBL:AP001252
ProteinModelPortal:H9KV31 SMR:H9KV31 PRIDE:H9KV31
Ensembl:ENST00000284894 Bgee:H9KV31 Uniprot:H9KV31
Length = 695
Score = 140 (54.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 35/82 (42%), Positives = 45/82 (54%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLT 213
+ TAE E +T SCRA+GSP P I W K+I N++ YI+K N+ LT
Sbjct: 77 NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEE--------NEK-YILKGSNT--ELT 125
Query: 214 IVAVTMSDSGIYTCRAKNGAGE 235
+ + SD G Y CRA N AGE
Sbjct: 126 VRNIINSDGGPYVCRATNKAGE 147
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/65 (20%), Positives = 28/65 (43%)
Query: 236 VFTNISLNVIKVETAVAQPDPVYLVASLTTVVTIILTACFVVLCIILLKAKRKRYADVNR 295
+F + L + + VA + L+ +T V + C +++CI +K +
Sbjct: 553 LFNGLGLGAV-IGLGVAA---LLLILVVTDVSCFFIRQCGLLMCITRRMCGKKSGSSGKS 608
Query: 296 RYLED 300
+ LE+
Sbjct: 609 KELEE 613
>ZFIN|ZDB-GENE-990415-31 [details] [associations]
symbol:ncam1a "neural cell adhesion molecule 1a"
species:7955 "Danio rerio" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
ZFIN:ZDB-GENE-990415-31 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016020 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007155 InterPro:IPR013098
Pfam:PF07679 KO:K06491 HOGENOM:HOG000074124 HOVERGEN:HBG052579
HSSP:P13596 EMBL:AY029402 IPI:IPI00502263 RefSeq:NP_571277.1
UniGene:Dr.75350 ProteinModelPortal:Q90YM1 SMR:Q90YM1 IntAct:Q90YM1
STRING:Q90YM1 PRIDE:Q90YM1 GeneID:30447 KEGG:dre:30447 CTD:30447
InParanoid:Q90YM1 ArrayExpress:Q90YM1 Bgee:Q90YM1 Uniprot:Q90YM1
Length = 838
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/113 (27%), Positives = 53/113 (46%)
Query: 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT 205
P I + +E E +TL+C ATG P P I W F ++ L ++++
Sbjct: 302 PKITFLENQTASELEEQITLTCEATGDPTPNIIWSFGRRVFTENEQSLDG----NVVVRS 357
Query: 206 INSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVY 258
+S+LT+ V +D+G Y C A+N G+ ++ L V + + P V+
Sbjct: 358 DARVSSLTLKYVQFTDAGQYLCTARNSIGQDIQSMYLEV-RYAPKIQGPQAVF 409
>FB|FBgn0264975 [details] [associations]
symbol:Nrg "Neuroglian" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=NAS;IDA]
[GO:0007560 "imaginal disc morphogenesis" evidence=IMP] [GO:0007158
"neuron cell-cell adhesion" evidence=ISS;NAS;IMP] [GO:0005509
"calcium ion binding" evidence=IDA] [GO:0016319 "mushroom body
development" evidence=NAS;IMP] [GO:0008050 "female courtship
behavior" evidence=IMP;TAS] [GO:0048036 "central complex
development" evidence=IMP;NAS] [GO:0045924 "regulation of female
receptivity" evidence=IMP;NAS] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=IMP] [GO:0016328 "lateral
plasma membrane" evidence=TAS] [GO:0005918 "septate junction"
evidence=IDA] [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0019991 "septate junction assembly" evidence=IMP] [GO:0005919
"pleated septate junction" evidence=IDA] [GO:0060857 "establishment
of glial blood-brain barrier" evidence=IMP] [GO:0050808 "synapse
organization" evidence=IMP] [GO:0008049 "male courtship behavior"
evidence=IMP] [GO:0021682 "nerve maturation" evidence=IMP]
[GO:0008366 "axon ensheathment" evidence=IMP] [GO:0048675 "axon
extension" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048812 "neuron projection morphogenesis"
evidence=IMP] [GO:0035011 "melanotic encapsulation of foreign
target" evidence=IMP] [GO:0030175 "filopodium" evidence=IDA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0016021 GO:GO:0007173
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0060857 GO:GO:0035151
GO:GO:0019991 EMBL:AE014298 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0050808
GO:GO:0005509 GO:GO:0030175 GO:GO:0005923 GO:GO:0048813
GO:GO:0045924 GO:GO:0016319 GO:GO:0008049 GO:GO:0016328
InterPro:IPR013098 Pfam:PF07679 GO:GO:0007158 InterPro:IPR013151
Pfam:PF00047 GO:GO:0048675 GO:GO:0035011 InterPro:IPR026966
Pfam:PF13882 GeneTree:ENSGT00690000101868 GO:GO:0008366
eggNOG:NOG293951 GO:GO:0021682 GO:GO:0007560 EMBL:M28231
EMBL:AF050085 EMBL:AF050084 EMBL:AY058284 EMBL:BT024971 EMBL:X76243
EMBL:X76244 PIR:A32579 RefSeq:NP_001162704.1 RefSeq:NP_001162705.1
RefSeq:NP_001162706.1 RefSeq:NP_511090.1 RefSeq:NP_727274.1
RefSeq:NP_996380.1 UniGene:Dm.3700 PDB:1CFB PDBsum:1CFB
ProteinModelPortal:P20241 SMR:P20241 DIP:DIP-22412N IntAct:P20241
MINT:MINT-1694518 STRING:P20241 PaxDb:P20241
EnsemblMetazoa:FBtr0071208 EnsemblMetazoa:FBtr0301763
EnsemblMetazoa:FBtr0333523 GeneID:31792 KEGG:dme:Dmel_CG1634
CTD:31792 FlyBase:FBgn0002968 InParanoid:P20241 OrthoDB:EOG4BK3JN
EvolutionaryTrace:P20241 GenomeRNAi:31792 NextBio:775317
Bgee:P20241 GO:GO:0005919 GO:GO:0048036 GO:GO:0008050
Uniprot:P20241
Length = 1302
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/126 (34%), Positives = 62/126 (49%)
Query: 137 LNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
LN++ A P I V+ + NVT+ CR GSP P +KW+ S+ L
Sbjct: 425 LNVQ--AEPPTISEAPAAVSTVDGRNVTIKCRVNGSPKPLVKWL-------RASNWLTG- 474
Query: 197 NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDP 256
+Y + + +L I VT SD+G YTC A+N GE+ + SL V+K T + Q
Sbjct: 475 --GRY---NVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSL-VVKEHTRITQEPQ 528
Query: 257 VYLVAS 262
Y VA+
Sbjct: 529 NYEVAA 534
Score = 130 (50.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 37/113 (32%), Positives = 55/113 (48%)
Query: 138 NLEDFACSPNIRPIT-----PDV-TAEENENVTLSCRATGSPVPKIKWIFKEKIIANISS 191
N + F+ N+ + P++ TA E+E V CRA G P PKI WI K I
Sbjct: 325 NAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQ--- 381
Query: 192 GLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
+ N R+ + T N++ I+ + D+G Y C A N G V+ ++ LNV
Sbjct: 382 --STPNPRRTV--TDNTIR---IINLVKGDTGNYGCNATNSLGYVYKDVYLNV 427
>UNIPROTKB|Q86VH4 [details] [associations]
symbol:LRRTM4 "Leucine-rich repeat transmembrane neuronal
protein 4" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182030 EMBL:AY358324 EMBL:BC099738
EMBL:BC110058 IPI:IPI00465323 IPI:IPI00884323 RefSeq:NP_001128217.1
RefSeq:NP_079269.4 UniGene:Hs.285782 ProteinModelPortal:Q86VH4
SMR:Q86VH4 STRING:Q86VH4 PhosphoSite:Q86VH4 DMDM:166897996
PaxDb:Q86VH4 PRIDE:Q86VH4 Ensembl:ENST00000409088
Ensembl:ENST00000409093 Ensembl:ENST00000409884 GeneID:80059
KEGG:hsa:80059 UCSC:uc002snq.3 UCSC:uc002sns.2 CTD:80059
GeneCards:GC02M076974 HGNC:HGNC:19411 MIM:610870 neXtProt:NX_Q86VH4
PharmGKB:PA134972631 ChiTaRS:LRRTM4 GenomeRNAi:80059 NextBio:70258
ArrayExpress:Q86VH4 Bgee:Q86VH4 CleanEx:HS_LRRTM4
Genevestigator:Q86VH4 Uniprot:Q86VH4
Length = 590
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 41/125 (32%), Positives = 60/125 (48%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD 79
+++++ TG + CP C C GK V C++ F IPE + G+Q L L N +
Sbjct: 22 LLLVMLTGAQRA---CPKNCRCD---GK-IVYCESHAFADIPENISGGSQGLSLRFNSIQ 74
Query: 80 RYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
+ F L L+ L L +N I V I L+EL LS N I + ++ F VP
Sbjct: 75 KLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPN 134
Query: 137 L-NLE 140
L NL+
Sbjct: 135 LRNLD 139
>MGI|MGI:2389180 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389180 GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0032281 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:AY182031 EMBL:BC037216
EMBL:AK032470 IPI:IPI00170371 IPI:IPI00269563 RefSeq:NP_848846.3
UniGene:Mm.473274 UniGene:Mm.483425 ProteinModelPortal:Q80XG9
SMR:Q80XG9 STRING:Q80XG9 PRIDE:Q80XG9 Ensembl:ENSMUST00000074662
Ensembl:ENSMUST00000126005 Ensembl:ENSMUST00000126399
Ensembl:ENSMUST00000133918 Ensembl:ENSMUST00000147663 GeneID:243499
KEGG:mmu:243499 UCSC:uc009ckf.2 UCSC:uc012enp.1 InParanoid:Q80XG9
NextBio:385801 Bgee:Q80XG9 CleanEx:MM_LRRTM4 Genevestigator:Q80XG9
GermOnline:ENSMUSG00000052581 Uniprot:Q80XG9
Length = 590
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 41/125 (32%), Positives = 60/125 (48%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD 79
+++++ TG + CP C C GK V C++ F IPE + G+Q L L N +
Sbjct: 22 LLLVMLTGAQRA---CPKNCRCD---GK-IVYCESHAFADIPENISGGSQGLSLRFNSIQ 74
Query: 80 RYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
+ F L L+ L L +N I V I L+EL LS N I + ++ F VP
Sbjct: 75 KLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPN 134
Query: 137 L-NLE 140
L NL+
Sbjct: 135 LRNLD 139
>RGD|1560707 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1560707 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:BC168219 IPI:IPI00388758
RefSeq:NP_001128218.1 UniGene:Rn.140910 GeneID:500219
KEGG:rno:500219 OrthoDB:EOG4MW85Z NextBio:705440
Genevestigator:B4F7C5 Uniprot:B4F7C5
Length = 590
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 41/125 (32%), Positives = 60/125 (48%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD 79
+++++ TG + CP C C GK V C++ F IPE + G+Q L L N +
Sbjct: 22 LLLVMLTGAQRA---CPKNCRCD---GK-IVYCESHAFADIPENISGGSQGLSLRFNSIQ 74
Query: 80 RYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
+ F L L+ L L +N I V I L+EL LS N I + ++ F VP
Sbjct: 75 KLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPN 134
Query: 137 L-NLE 140
L NL+
Sbjct: 135 LRNLD 139
>UNIPROTKB|B7Z7U4 [details] [associations]
symbol:NTRK3 "Tyrosine-protein kinase receptor"
species:9606 "Homo sapiens" [GO:0005030 "neurotrophin receptor
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0007169 "transmembrane receptor protein tyrosine
kinase signaling pathway" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004714 "transmembrane receptor protein tyrosine
kinase activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR002011
InterPro:IPR007110 InterPro:IPR008266 InterPro:IPR011009
InterPro:IPR017441 InterPro:IPR020446 InterPro:IPR020777
Pfam:PF07714 PRINTS:PR00109 PRINTS:PR01939 PRINTS:PR01942
PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS00239 PROSITE:PS50011
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005524 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004714 SUPFAM:SSF56112
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483 SMART:SM00082
GO:GO:0007169 InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG056735
GO:GO:0005030 UniGene:Hs.410969 UniGene:Hs.706364 HGNC:HGNC:8033
ChiTaRS:NTRK3 EMBL:AC009711 EMBL:AC011966 EMBL:AC021677
EMBL:AK302504 IPI:IPI01012361 SMR:B7Z7U4 STRING:B7Z7U4
Ensembl:ENST00000542733 UCSC:uc010upl.1 Uniprot:B7Z7U4
Length = 617
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 71 LDLSDNFLDRYTFR--KLINLVELDLSYNQIQF-VPSHILDSILELRELKLSGNPIQKIT 127
++LS N L +++ + ++L EL L N + E E KL+ + I
Sbjct: 34 INLSSNRLTTLSWQLFQTLSLRELQLEQNFFNCSCDIRWMQLWQEQGEAKLNSQNLYCIN 93
Query: 128 HEAFINVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKII 186
+ +P + C P I ++T E +N ++C +GSP+P + WI
Sbjct: 94 ADGS-QLPLFRMNISQCDLPEISVSHVNLTVREGDNAVITCNGSGSPLPDVDWIV----- 147
Query: 187 ANISSGLANMNKRQYIIKTINSLS-NLTIVAVTMSDSGI-YTCRAKNGAGEVFTNISLNV 244
+GL ++N Q + N + NLT+V VT D+G TC A+N G +++L V
Sbjct: 148 ----TGLQSINTHQTNLNWTNVHAINLTLVNVTSEDNGFTLTCIAENVVGMSNASVALTV 203
Query: 245 IKVETAVAQPDP 256
V+ +P
Sbjct: 204 YYPPRVVSLEEP 215
>MGI|MGI:2389174 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042043 "neurexin family protein binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO] [GO:0060076 "excitatory synapse"
evidence=ISO] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2389174
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI OrthoDB:EOG4PG60Z
EMBL:AY182027 EMBL:AK043173 EMBL:AK043784 EMBL:AK044705
EMBL:AK046818 EMBL:AK049920 EMBL:AK122278 IPI:IPI00313492
RefSeq:NP_821072.1 UniGene:Mm.39900 ProteinModelPortal:Q8BGA3
SMR:Q8BGA3 STRING:Q8BGA3 PhosphoSite:Q8BGA3 PaxDb:Q8BGA3
PRIDE:Q8BGA3 DNASU:107065 Ensembl:ENSMUST00000091636 GeneID:107065
KEGG:mmu:107065 UCSC:uc008ema.1 InParanoid:Q8BGA3 NextBio:358560
Bgee:Q8BGA3 CleanEx:MM_LRRTM2 Genevestigator:Q8BGA3
GermOnline:ENSMUSG00000071862 Uniprot:Q8BGA3
Length = 515
Score = 124 (48.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 44/168 (26%), Positives = 73/168 (43%)
Query: 18 VYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
+Y M +V + CP C C+ K C ++ F ++P D G+ L L N
Sbjct: 17 IYAMSVVLKMLPALGMACPPKCRCE----KLLFYCDSQGFHSVPNATDKGSLGLSLRHNH 72
Query: 78 ---LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
L+R F L L L +NQI V + +L+EL LS N I + + F +
Sbjct: 73 ITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQL 132
Query: 135 PKLNLEDFACSPN-IRPITPDVTAEENENVTLSCRATG-SPVP-KIKW 179
+NL++ S N + + P++ + TL R+ +P ++ W
Sbjct: 133 --INLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFW 178
Score = 50 (22.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/112 (22%), Positives = 44/112 (39%)
Query: 207 NSLSNLTIVAVTMSDSGI-YTCRAKN----GAGEVFTNISLNVIKVETAVAQPDPVYLVA 261
N + +T +A T D YT + + G E+ T + + E +PD
Sbjct: 362 NLSTTVTAMATTYRDPTTEYTKISSSSYHVGDKEIPTTAGI-AVTTEEHFPEPDNAIFTQ 420
Query: 262 SLTTVVTIILTACFVVLCIILLKAKRKRYADVNRRYLEDKCESNHQQSKPLT 313
+ T +L + F ++ I+ + RK RR + NH+Q + T
Sbjct: 421 RVITGTMALLFSFFFIIFIVFIS--RKCCPPTLRRIRQCSMIQNHRQLRSQT 470
>RGD|1593785 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042043 "neurexin
family protein binding" evidence=IPI] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO;IDA] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1593785 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0060076 EMBL:CH473974
CTD:26045 OrthoDB:EOG4PG60Z IPI:IPI00202163 RefSeq:NP_001102939.1
UniGene:Rn.218238 Ensembl:ENSRNOT00000026825 GeneID:685472
KEGG:rno:685472 UCSC:RGD:1593785 NextBio:729781 Uniprot:D4A7P2
Length = 515
Score = 124 (48.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 44/168 (26%), Positives = 73/168 (43%)
Query: 18 VYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
+Y M +V + CP C C+ K C ++ F ++P D G+ L L N
Sbjct: 17 IYAMSVVLKMLPALGMACPPKCRCE----KLLFYCDSQGFHSVPNATDKGSLGLSLRHNH 72
Query: 78 ---LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
L+R F L L L +NQI V + +L+EL LS N I + + F +
Sbjct: 73 ITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQL 132
Query: 135 PKLNLEDFACSPN-IRPITPDVTAEENENVTLSCRATG-SPVP-KIKW 179
+NL++ S N + + P++ + TL R+ +P ++ W
Sbjct: 133 --INLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFW 178
Score = 50 (22.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/112 (22%), Positives = 44/112 (39%)
Query: 207 NSLSNLTIVAVTMSDSGI-YTCRAKN----GAGEVFTNISLNVIKVETAVAQPDPVYLVA 261
N + +T +A T D YT + + G E+ T + + E +PD
Sbjct: 362 NLSTTVTAMATTYRDPTTEYTKISSSSYHVGDKEIPTTAGI-AVTTEEHFPEPDNAIFTQ 420
Query: 262 SLTTVVTIILTACFVVLCIILLKAKRKRYADVNRRYLEDKCESNHQQSKPLT 313
+ T +L + F ++ I+ + RK RR + NH+Q + T
Sbjct: 421 RVITGTMALLFSFFFIIFIVFIS--RKCCPPTLRRIRQCSMIQNHRQLRSQT 470
>MGI|MGI:2389173 [details] [associations]
symbol:Lrrtm1 "leucine rich repeat transmembrane neuronal 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007610 "behavior"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=ISO] [GO:0030426 "growth
cone" evidence=ISO] [GO:0035418 "protein localization to synapse"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO;IMP] [GO:0060076 "excitatory
synapse" evidence=ISO] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389173 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0007610 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
GO:GO:0030426 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG OMA:EPDLFHG
EMBL:AY182025 EMBL:AK053345 EMBL:AK053364 EMBL:AK136857
EMBL:BC027803 IPI:IPI00170022 RefSeq:NP_083156.2 UniGene:Mm.292568
ProteinModelPortal:Q8K377 SMR:Q8K377 IntAct:Q8K377 STRING:Q8K377
PhosphoSite:Q8K377 PaxDb:Q8K377 PRIDE:Q8K377
Ensembl:ENSMUST00000020400 Ensembl:ENSMUST00000159616
Ensembl:ENSMUST00000161677 GeneID:74342 KEGG:mmu:74342
UCSC:uc009cjt.1 InParanoid:Q8K377 NextBio:340493 Bgee:Q8K377
CleanEx:MM_LRRTM1 Genevestigator:Q8K377
GermOnline:ENSMUSG00000060780 Uniprot:Q8K377
Length = 522
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/169 (27%), Positives = 74/169 (43%)
Query: 22 VLVCT--GCLQVFAECPSTC--ECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
V++C C Q+ PS C +C+ +G + C+A N T P L G L L N
Sbjct: 20 VVLCLLGACFQMLPAAPSGCPGQCRCEG--RLLYCEALNLTEAPHNLS-GLLGLSLRYNS 76
Query: 78 LDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
L F L+ L L L +N I V + ++EL LS N I ++ + F +
Sbjct: 77 LSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPM 136
Query: 135 PKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE 183
P L D + + ++ + PD+ + TL RA ++ IF++
Sbjct: 137 PNLRSVDLSYN-KLQALAPDLFHGLRKLTTLHMRANAIQFVPVR-IFQD 183
>RGD|1585921 [details] [associations]
symbol:LRRTM1 "leucine rich repeat transmembrane neuronal 1"
species:10116 "Rattus norvegicus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA;ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426
"growth cone" evidence=IEA;ISO] [GO:0035418 "protein localization
to synapse" evidence=IEA;ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0050808 "synapse organization" evidence=ISO;IDA]
[GO:0060076 "excitatory synapse" evidence=IDA] [GO:0009986 "cell
surface" evidence=ISO] InterPro:IPR001611 PROSITE:PS51450
RGD:1585921 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 GO:GO:0007610
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0060076 GO:GO:0035418 EMBL:CH473957
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OrthoDB:EOG4FN4HG
OMA:EPDLFHG IPI:IPI00364927 RefSeq:NP_001102844.1 UniGene:Rn.171424
PRIDE:D4A6D8 Ensembl:ENSRNOT00000007993 GeneID:679668
KEGG:rno:679668 UCSC:RGD:1585921 NextBio:716984 Uniprot:D4A6D8
Length = 523
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/169 (27%), Positives = 74/169 (43%)
Query: 22 VLVCT--GCLQVFAECPSTC--ECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
V++C C Q+ PS C +C+ +G + C+A N T P L G L L N
Sbjct: 20 VVLCLLGACFQMLPAAPSGCPGQCRCEG--RLLYCEALNLTEAPHNLS-GLLGLSLRYNS 76
Query: 78 LDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
L F L+ L L L +N I V + ++EL LS N I ++ + F +
Sbjct: 77 LSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPM 136
Query: 135 PKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE 183
P L D + + ++ + PD+ + TL RA ++ IF++
Sbjct: 137 PNLRSVDLSYN-KLQALAPDLFHGLRKLTTLHMRANAIQFVPVR-IFQD 183
>RGD|628607 [details] [associations]
symbol:Lrit1 "leucine-rich repeat, immunoglobulin-like and
transmembrane domains 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=IDA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:628607
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0030176
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:26103 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 OrthoDB:EOG42JNR2
EMBL:AB028461 IPI:IPI00215326 RefSeq:NP_647547.2 UniGene:Rn.20309
ProteinModelPortal:Q9JMH2 STRING:Q9JMH2 PhosphoSite:Q9JMH2
PRIDE:Q9JMH2 Ensembl:ENSRNOT00000017773 GeneID:246214
KEGG:rno:246214 UCSC:RGD:628607 InParanoid:Q9JMH2 NextBio:623495
Genevestigator:Q9JMH2 GermOnline:ENSRNOG00000012790 Uniprot:Q9JMH2
Length = 623
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/153 (29%), Positives = 68/153 (44%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWK----GGK-ETVLCKAKNFTTIPEQLDVGTQVLDLS 74
+ +L G Q ++ CPS C C G K TV+C + T P + T L L
Sbjct: 8 LWLLALGGPHQAWSFCPSQCSCSLHILSDGSKARTVVCSDPDLTLPPASIPPDTCKLRLE 67
Query: 75 DNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
+ R TFR L L +L L YN + + + +L + LREL+L GN + A
Sbjct: 68 RTAIRRVPGETFRPLSRLEQLWLPYNALSELSTLMLRGLRRLRELRLPGNHLVTFPWAAL 127
Query: 132 INVPKLNLEDFACSPNIRPITPDVTAEENENVT 164
+ P+L L D + + + P+ EN+T
Sbjct: 128 KDTPQLQLLDLQAN-RLSTLPPEAV-HFLENLT 158
Score = 114 (45.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 47/151 (31%), Positives = 69/151 (45%)
Query: 105 HILD---SILELRELKLS-GNPIQKITHEAFINVPKLNLEDFAC-SPNIRPITPDVTAEE 159
H+LD S L E +L G+P + + AF +L L C SP +RP + +
Sbjct: 214 HLLDGWASNLIFIEARLRCGSP-RSLAGVAF---SQLELRK--CQSPELRPGVTSIISPL 267
Query: 160 NENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTM 219
V L C ATG P P++ W + N Q + +S + L + V++
Sbjct: 268 GSTVLLRCGATGIPGPEMSW-------RRANGRPLNGTVHQEVSSDGSSWTLLDLPVVSL 320
Query: 220 SDSGIYTCRAKNGAGEVFTNISLNVIKVETA 250
DSG Y C+AKN G T ISL V + +T+
Sbjct: 321 FDSGDYICQAKNFLGASETLISLIVTEPQTS 351
Score = 63 (27.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 19/49 (38%), Positives = 25/49 (51%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELR 114
Q+LDL N L L NL LDLS NQ+ +P +LD+ L+
Sbjct: 134 QLLDLQANRLSTLPPEAVHFLENLTFLDLSNNQLMRLPEELLDTWAHLK 182
>ZFIN|ZDB-GENE-041111-75 [details] [associations]
symbol:lrig2 "leucine-rich repeats and
immunoglobulin-like domains 2" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041111-75 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 EMBL:CR391948 IPI:IPI00901536
Ensembl:ENSDART00000112700 Uniprot:E7F013
Length = 1044
Score = 102 (41.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 31/96 (32%), Positives = 46/96 (47%)
Query: 152 TP-DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLS 210
TP D+T L C A G P P+I W K+ I N A +R +++ ++
Sbjct: 562 TPMDLTIRTGTVARLECAAEGHPTPQIAWQ-KDGGI-NFP---AARERRMHVMPDDDTFF 616
Query: 211 NLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIK 246
I V D G+Y+C AKN AG + N +L V++
Sbjct: 617 ---IANVKAEDMGVYSCTAKNEAGSLSANATLTVLE 649
Score = 94 (38.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 41/150 (27%), Positives = 64/150 (42%)
Query: 149 RPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINS 208
RP+ D E L C A GSP P++ W + + + +R + N
Sbjct: 655 RPLE-DRNVARGETAVLQCIARGSPAPRLNWTKDDAPLV--------LTERHFFAAA-NQ 704
Query: 209 LSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQP-DPVYLVASLTTV- 266
L L IV +D+G YTC N G +I L+V +A P VY TTV
Sbjct: 705 L--LIIVDAGPADAGKYTCIMSNTLGTERGHIYLSVSP--SANCDPGSSVYGHDGWTTVG 760
Query: 267 VTIILTACFVV----LCIILLKAKRKRYAD 292
+ +++ C VV + +I++ R++ D
Sbjct: 761 IVVMVVVCCVVGTSLVWVIVIYHMRRKSED 790
Score = 81 (33.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 33/123 (26%), Positives = 47/123 (38%)
Query: 35 CPSTCECKWKGGKETVL-CKAKNFTTIPEQLDVGTQVLDLSDNFLDRYTFR--KLINLVE 91
CPS C C G +L C K T + ++ N L F N+
Sbjct: 24 CPSPCSCSGGPGAAQLLDCNRKRLTAAALEAPAWVTHASINQNELTAVPFLGDASSNITV 83
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPN-IRP 150
L L +N+I V + L L L LS N I ++ +F P + L+ S N I
Sbjct: 84 LSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKAGSF---PPMQLKYLNLSKNKISS 140
Query: 151 ITP 153
+ P
Sbjct: 141 LEP 143
Score = 76 (31.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 64 LDVGTQVLDLS-DNFLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNP 122
LD+ + L+ ++F+ + K +N L L N+I+ + + ++EL L LS N
Sbjct: 322 LDIRNNEISLAIEDFIGMFVGLKRLN--SLVLQNNKIRTITKRAFEGLMELENLDLSKNG 379
Query: 123 IQKITHEAFINVPKLNLEDFACS 145
I I +AF ++ KL D S
Sbjct: 380 IMSIHPDAFTHL-KLKTLDLNSS 401
>UNIPROTKB|F8WFM6 [details] [associations]
symbol:Ntrk2 "Tyrosine-protein kinase receptor"
species:10116 "Rattus norvegicus" [GO:0004714 "transmembrane
receptor protein tyrosine kinase activity" evidence=IEA]
[GO:0005030 "neurotrophin receptor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0007169 "transmembrane receptor
protein tyrosine kinase signaling pathway" evidence=IEA]
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR002011
InterPro:IPR007110 InterPro:IPR008266 InterPro:IPR011009
InterPro:IPR017441 InterPro:IPR020455 InterPro:IPR020635
InterPro:IPR020777 Pfam:PF07714 PRINTS:PR00109 PRINTS:PR01939
PRINTS:PR01941 PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS00239
PROSITE:PS50011 PROSITE:PS50835 SMART:SM00219 RGD:3213
GO:GO:0005524 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004714 SUPFAM:SSF56112 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 GO:GO:0007169 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0005030 IPI:IPI00569029 ProteinModelPortal:F8WFM6
Ensembl:ENSRNOT00000025461 Uniprot:F8WFM6
Length = 772
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 65/242 (26%), Positives = 112/242 (46%)
Query: 17 RVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKN-----FTTI-PEQLDV-GTQ 69
R++ + L+ G + CP +C+C + C + F + P +D
Sbjct: 14 RLWGLCLLVLGFWRASLACPMSCKCS----TTRIWCTEPSPGIVAFPRLEPNSIDPENIT 69
Query: 70 VLDLSDN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
++ + N L R FR L +L +L L+ N F S + + L+E K S + Q +
Sbjct: 70 EINFTRNKLTSLSRRHFRHL-DLSDLILTGNP--FTCSCDIMWLKTLQETKSSPDT-QDL 125
Query: 127 --THEAFINVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE 183
+E+ N P NL+ C P+ R P++T EE ++VT+SC G P+P + W
Sbjct: 126 YCLNESSKNTPLANLQIPNCGLPSARLAAPNLTVEEGKSVTISCSVGGDPLPTLYWD--- 182
Query: 184 KIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIY-TCRAKNGAGEVFTNISL 242
+ N+ S +MN+ T ++ +L I ++ DSG +C A+N GE +++L
Sbjct: 183 --VGNLVS--KHMNE------TSHTQGSLRITNISSDDSGKQISCVAENLVGEDQDSVNL 232
Query: 243 NV 244
V
Sbjct: 233 TV 234
>UNIPROTKB|K7GR86 [details] [associations]
symbol:LOC100515564 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00680000099931 EMBL:CU570935
Ensembl:ENSSSCT00000036483 Uniprot:K7GR86
Length = 830
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 137 LNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
++L+ FA P I + E E VTL+C A+G P+P I W + NISS +
Sbjct: 282 IHLKVFA-KPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTR---NISSEEKTL 337
Query: 197 NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
+ ++++ +S+LT+ ++ +D+G Y C A N G+ ++ L V
Sbjct: 338 DGHM-VVRSHARVSSLTLKSIQYTDAGEYVCTASNTIGQDSQSMYLEV 384
>MGI|MGI:2444277 [details] [associations]
symbol:Islr2 "immunoglobulin superfamily containing
leucine-rich repeat 2" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2444277 GO:GO:0016021 GO:GO:0005886
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045773
InterPro:IPR000372 SMART:SM00013 HSSP:Q9BZR6 CTD:57611
eggNOG:NOG240332 HOGENOM:HOG000113108 HOVERGEN:HBG100863
OrthoDB:EOG4QC14W EMBL:EU497918 EMBL:AK129367 EMBL:BC059068
EMBL:BC096531 IPI:IPI00420535 RefSeq:NP_001155007.1
RefSeq:NP_001155008.1 RefSeq:NP_001155009.1 RefSeq:NP_001155010.1
RefSeq:NP_001155011.1 RefSeq:NP_001155012.1 RefSeq:NP_001155013.1
RefSeq:NP_796167.2 UniGene:Mm.186499 ProteinModelPortal:Q5RKR3
SMR:Q5RKR3 STRING:Q5RKR3 PhosphoSite:Q5RKR3 PaxDb:Q5RKR3
PRIDE:Q5RKR3 Ensembl:ENSMUST00000114144 Ensembl:ENSMUST00000163897
Ensembl:ENSMUST00000165276 Ensembl:ENSMUST00000170421 GeneID:320563
KEGG:mmu:320563 UCSC:uc009pwl.1 GeneTree:ENSGT00700000104028
InParanoid:Q5RKR3 NextBio:396975 Bgee:Q5RKR3 Genevestigator:Q5RKR3
Uniprot:Q5RKR3
Length = 745
Score = 105 (42.0 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 33/114 (28%), Positives = 47/114 (41%)
Query: 29 LQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRK 85
L V CP C C K + C K +PE L L LS N L R F
Sbjct: 14 LGVVRACPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSANKITVLRRGAFVN 73
Query: 86 LINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNL 139
+ + L L++++++ V S L + +L+ L LS N I N+ L L
Sbjct: 74 VTQVTSLWLAHSEVRTVESGALAVLSQLKNLDLSHNLISNFPWSDLRNLSALQL 127
Score = 62 (26.9 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 211 NLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
+L + ++ ++GIYTCRA N G T++ + V
Sbjct: 340 SLLVPLLSAKEAGIYTCRAHNELGTNSTSLRVTV 373
Score = 51 (23.0 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 15/53 (28%), Positives = 21/53 (39%)
Query: 134 VPKLNLEDFACSP-NIR------PITPDVTAEENENVTLSCRATGSPVPKIKW 179
VP L C+P ++R P P L C A G P P+++W
Sbjct: 220 VPVHRLPALPCAPPSVRLSAEPPPEAPGTPLRAGLAFMLHCVAEGHPTPRLQW 272
>UNIPROTKB|F1N1W7 [details] [associations]
symbol:NCAM1 "Neural cell adhesion molecule 1" species:9913
"Bos taurus" [GO:0016020 "membrane" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016020 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00680000099931 IPI:IPI00710515 EMBL:DAAA02040306
EMBL:DAAA02040307 EMBL:DAAA02040308 EMBL:DAAA02040309
Ensembl:ENSBTAT00000007501 ArrayExpress:F1N1W7 Uniprot:F1N1W7
Length = 843
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 137 LNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
++L+ FA P I + E E VTL+C A+G P+P I W + NISS +
Sbjct: 299 IHLKVFA-KPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTR---NISSEEKTL 354
Query: 197 NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
+ ++++ +S+LT+ ++ +D+G Y C A N G+ ++ L V
Sbjct: 355 DGHM-VVRSHARVSSLTLKSIQYTDAGEYVCTASNTIGQDSQSMYLEV 401
>UNIPROTKB|H0YM90 [details] [associations]
symbol:NTRK3 "Tyrosine-protein kinase receptor"
species:9606 "Homo sapiens" [GO:0005030 "neurotrophin receptor
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0007169 "transmembrane receptor protein tyrosine
kinase signaling pathway" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004714 "transmembrane receptor protein tyrosine
kinase activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR002011
InterPro:IPR007110 InterPro:IPR008266 InterPro:IPR011009
InterPro:IPR017441 InterPro:IPR020446 InterPro:IPR020777
Pfam:PF07714 PRINTS:PR00109 PRINTS:PR01939 PRINTS:PR01942
PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS00239 PROSITE:PS50011
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005524 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004714 SUPFAM:SSF56112
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483 SMART:SM00082
GO:GO:0007169 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0005030 HGNC:HGNC:8033
ChiTaRS:NTRK3 EMBL:AC009711 EMBL:AC011966 EMBL:AC021677
ProteinModelPortal:H0YM90 SMR:H0YM90 Ensembl:ENST00000558676
Bgee:H0YM90 Uniprot:H0YM90
Length = 705
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 71 LDLSDNFLDRYTFR--KLINLVELDLSYNQIQF-VPSHILDSILELRELKLSGNPIQKIT 127
++LS N L +++ + ++L EL L N + E E KL+ + I
Sbjct: 132 INLSSNRLTTLSWQLFQTLSLRELQLEQNFFNCSCDIRWMQLWQEQGEAKLNSQNLYCIN 191
Query: 128 HEAFINVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKII 186
+ +P + C P I ++T E +N ++C +GSP+P + WI
Sbjct: 192 ADGS-QLPLFRMNISQCDLPEISVSHVNLTVREGDNAVITCNGSGSPLPDVDWIV----- 245
Query: 187 ANISSGLANMNKRQYIIKTINSLS-NLTIVAVTMSDSGI-YTCRAKNGAGEVFTNISLNV 244
+GL ++N Q + N + NLT+V VT D+G TC A+N G +++L V
Sbjct: 246 ----TGLQSINTHQTNLNWTNVHAINLTLVNVTSEDNGFTLTCIAENVVGMSNASVALTV 301
Query: 245 IKVETAVAQPDP 256
V+ +P
Sbjct: 302 YYPPRVVSLEEP 313
>UNIPROTKB|F1LTE5 [details] [associations]
symbol:Ncam1 "Neural cell adhesion molecule 1"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR009138
Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 RGD:67378 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016020 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679 IPI:IPI00778762
Ensembl:ENSRNOT00000059218 ArrayExpress:F1LTE5 Uniprot:F1LTE5
Length = 715
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 137 LNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
++L+ FA P I + E E VTL+C A+G P+P I W + NISS +
Sbjct: 290 IHLKVFA-KPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTR---NISSEEKTL 345
Query: 197 NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
+ ++++ +S+LT+ ++ +D+G Y C A N G+ ++ L V
Sbjct: 346 DGHM-VVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEV 392
>UNIPROTKB|Q6UXK2 [details] [associations]
symbol:ISLR2 "Immunoglobulin superfamily containing
leucine-rich repeat protein 2" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0009986 "cell surface"
evidence=ISS] [GO:0045773 "positive regulation of axon extension"
evidence=ISS] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0009986
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045773 InterPro:IPR000372 SMART:SM00013
HSSP:Q9BZR6 EMBL:AB040898 EMBL:AY358316 EMBL:AK290467
IPI:IPI00479654 RefSeq:NP_001123608.1 RefSeq:NP_001123609.1
RefSeq:NP_001123610.1 RefSeq:NP_065902.1 UniGene:Hs.254775
ProteinModelPortal:Q6UXK2 SMR:Q6UXK2 IntAct:Q6UXK2 STRING:Q6UXK2
PhosphoSite:Q6UXK2 DMDM:74758577 PaxDb:Q6UXK2 PRIDE:Q6UXK2
Ensembl:ENST00000361742 Ensembl:ENST00000419208
Ensembl:ENST00000435464 Ensembl:ENST00000445793
Ensembl:ENST00000453268 Ensembl:ENST00000565159
Ensembl:ENST00000565540 GeneID:57611 KEGG:hsa:57611 UCSC:uc002axd.3
CTD:57611 GeneCards:GC15P074421 HGNC:HGNC:29286 MIM:614179
neXtProt:NX_Q6UXK2 PharmGKB:PA143485505 eggNOG:NOG240332
HOGENOM:HOG000113108 HOVERGEN:HBG100863 InParanoid:Q6UXK2
OMA:PRASYLE OrthoDB:EOG4QC14W GenomeRNAi:57611 NextBio:64263
ArrayExpress:Q6UXK2 Bgee:Q6UXK2 CleanEx:HS_ISLR2
Genevestigator:Q6UXK2 Uniprot:Q6UXK2
Length = 745
Score = 106 (42.4 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 33/114 (28%), Positives = 46/114 (40%)
Query: 29 LQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRK 85
L V CP C C K + C K +PE L L LS N L R F
Sbjct: 14 LGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSANKITVLRRGAFAD 73
Query: 86 LINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNL 139
+ + L L++N+++ V L + +L+ L LS N I N+ L L
Sbjct: 74 VTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLRNLSALQL 127
Score = 61 (26.5 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 211 NLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
+L + ++ ++G+YTCRA N G T+I + V
Sbjct: 339 SLLVPLLSAKEAGVYTCRAHNELGANSTSIRVAV 372
Score = 48 (22.0 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 15/57 (26%), Positives = 22/57 (38%)
Query: 130 AFINVPKLNLEDFACSP-NIR-----PI-TPDVTAEENENVTLSCRATGSPVPKIKW 179
A VP L C+P ++ P+ P L C A G P P+++W
Sbjct: 216 ALQGVPVYRLPALPCAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQW 272
Score = 38 (18.4 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 342 EYSSVPLSDTTRGPEPRDKI 361
E + P DT+ G E D+I
Sbjct: 430 ETETEPEEDTSEGEEAEDQI 449
>UNIPROTKB|E9PLH7 [details] [associations]
symbol:NCAM1 "Neural cell adhesion molecule 1" species:9606
"Homo sapiens" [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679
IPI:IPI00435020 HGNC:HGNC:7656 ChiTaRS:NCAM1 EMBL:AP000802
EMBL:AP000880 EMBL:AP000999 EMBL:AP002853 ProteinModelPortal:E9PLH7
SMR:E9PLH7 Ensembl:ENST00000531044 ArrayExpress:E9PLH7 Bgee:E9PLH7
Uniprot:E9PLH7
Length = 733
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 137 LNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
++L+ FA P I + E E VTL+C A+G P+P I W + NISS +
Sbjct: 182 IHLKVFA-KPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTR---NISSEEKTL 237
Query: 197 NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
+ ++++ +S+LT+ ++ +D+G Y C A N G+ ++ L V
Sbjct: 238 DGHM-VVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEV 284
>UNIPROTKB|O15394 [details] [associations]
symbol:NCAM2 "Neural cell adhesion molecule 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007158 "neuron cell-cell adhesion" evidence=TAS]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR009138
Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007158
eggNOG:NOG308439 KO:K06491 HOGENOM:HOG000074124 HOVERGEN:HBG052579
EMBL:U75330 EMBL:AP001138 EMBL:BC052946 IPI:IPI00376427
RefSeq:NP_004531.2 UniGene:Hs.473450 PDB:2DOC PDB:2JLL PDB:2KBG
PDB:2V5T PDB:2VAJ PDB:2WIM PDB:2XY1 PDB:2XY2 PDB:2XYC PDBsum:2DOC
PDBsum:2JLL PDBsum:2KBG PDBsum:2V5T PDBsum:2VAJ PDBsum:2WIM
PDBsum:2XY1 PDBsum:2XY2 PDBsum:2XYC ProteinModelPortal:O15394
SMR:O15394 DIP:DIP-56211N IntAct:O15394 STRING:O15394
PhosphoSite:O15394 PaxDb:O15394 PRIDE:O15394
Ensembl:ENST00000400546 GeneID:4685 KEGG:hsa:4685 UCSC:uc002yld.2
CTD:4685 GeneCards:GC21P022370 H-InvDB:HIX0027799 HGNC:HGNC:7657
HPA:HPA030900 MIM:602040 neXtProt:NX_O15394 PharmGKB:PA31460
InParanoid:O15394 OMA:EPTISWY OrthoDB:EOG4MGS6S ChiTaRS:NCAM2
EvolutionaryTrace:O15394 GenomeRNAi:4685 NextBio:18068
ArrayExpress:O15394 Bgee:O15394 CleanEx:HS_NCAM2
Genevestigator:O15394 GermOnline:ENSG00000154654 Uniprot:O15394
Length = 837
Score = 140 (54.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 35/82 (42%), Positives = 45/82 (54%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLT 213
+ TAE E +T SCRA+GSP P I W K+I N++ YI+K N+ LT
Sbjct: 219 NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEE--------NEK-YILKGSNT--ELT 267
Query: 214 IVAVTMSDSGIYTCRAKNGAGE 235
+ + SD G Y CRA N AGE
Sbjct: 268 VRNIINSDGGPYVCRATNKAGE 289
Score = 37 (18.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 13/65 (20%), Positives = 28/65 (43%)
Query: 236 VFTNISLNVIKVETAVAQPDPVYLVASLTTVVTIILTACFVVLCIILLKAKRKRYADVNR 295
+F + L + + VA + L+ +T V + C +++CI +K +
Sbjct: 695 LFNGLGLGAV-IGLGVAA---LLLILVVTDVSCFFIRQCGLLMCITRRMCGKKSGSSGKS 750
Query: 296 RYLED 300
+ LE+
Sbjct: 751 KELEE 755
>UNIPROTKB|G3X6G8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:AYGKAPS EMBL:DAAA02043707
EMBL:DAAA02043700 EMBL:DAAA02043701 EMBL:DAAA02043702
EMBL:DAAA02043703 EMBL:DAAA02043704 EMBL:DAAA02043705
EMBL:DAAA02043706 Ensembl:ENSBTAT00000006288 Uniprot:G3X6G8
Length = 943
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 40/127 (31%), Positives = 55/127 (43%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
CP C C+ G V C + +T+P LD T LDLS N L F L L E
Sbjct: 32 CPVPCRCREAGILLWVDCSERGLSTVPAGLDPLTAYLDLSMNSLTELWPGVFHHLRFLEE 91
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNIRPI 151
L LS N++ +P + L+ L L N + I EA +P L+ N+ +
Sbjct: 92 LRLSGNRLAHIPGQAFSGLSSLKILMLQNNRLGGIPAEALWELP--GLQSLRLDANLISL 149
Query: 152 TPDVTAE 158
PD + E
Sbjct: 150 VPDRSFE 156
>UNIPROTKB|H0YND1 [details] [associations]
symbol:NTRK3 "Tyrosine-protein kinase receptor"
species:9606 "Homo sapiens" [GO:0005030 "neurotrophin receptor
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0007169 "transmembrane receptor protein tyrosine
kinase signaling pathway" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004714 "transmembrane receptor protein tyrosine
kinase activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR002011
InterPro:IPR007110 InterPro:IPR008266 InterPro:IPR011009
InterPro:IPR017441 InterPro:IPR020446 InterPro:IPR020635
InterPro:IPR020777 Pfam:PF07714 PRINTS:PR00109 PRINTS:PR01939
PRINTS:PR01942 PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS00239
PROSITE:PS50011 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00219
GO:GO:0005524 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004714 SUPFAM:SSF56112 InterPro:IPR003599 SMART:SM00409
InterPro:IPR000483 SMART:SM00082 GO:GO:0007169 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 CTD:4916
KO:K05101 GO:GO:0005030 UniGene:Hs.410969 UniGene:Hs.706364
GeneID:4916 KEGG:hsa:4916 HGNC:HGNC:8033 ChiTaRS:NTRK3
GenomeRNAi:4916 EMBL:AC009711 EMBL:AC011966 EMBL:AC021677
RefSeq:NP_001230030.1 ProteinModelPortal:H0YND1 SMR:H0YND1
Ensembl:ENST00000557856 Bgee:H0YND1 Uniprot:H0YND1
Length = 817
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 71 LDLSDNFLDRYTFR--KLINLVELDLSYNQIQF-VPSHILDSILELRELKLSGNPIQKIT 127
++LS N L +++ + ++L EL L N + E E KL+ + I
Sbjct: 132 INLSSNRLTTLSWQLFQTLSLRELQLEQNFFNCSCDIRWMQLWQEQGEAKLNSQNLYCIN 191
Query: 128 HEAFINVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKII 186
+ +P + C P I ++T E +N ++C +GSP+P + WI
Sbjct: 192 ADGS-QLPLFRMNISQCDLPEISVSHVNLTVREGDNAVITCNGSGSPLPDVDWIV----- 245
Query: 187 ANISSGLANMNKRQYIIKTINSLS-NLTIVAVTMSDSGI-YTCRAKNGAGEVFTNISLNV 244
+GL ++N Q + N + NLT+V VT D+G TC A+N G +++L V
Sbjct: 246 ----TGLQSINTHQTNLNWTNVHAINLTLVNVTSEDNGFTLTCIAENVVGMSNASVALTV 301
Query: 245 IKVETAVAQPDP 256
V+ +P
Sbjct: 302 YYPPRVVSLEEP 313
>UNIPROTKB|E9PG56 [details] [associations]
symbol:NTRK3 "Tyrosine-protein kinase receptor"
species:9606 "Homo sapiens" [GO:0005030 "neurotrophin receptor
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0007169 "transmembrane receptor protein tyrosine
kinase signaling pathway" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004714 "transmembrane receptor protein tyrosine
kinase activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR002011
InterPro:IPR007110 InterPro:IPR008266 InterPro:IPR011009
InterPro:IPR017441 InterPro:IPR020446 InterPro:IPR020635
InterPro:IPR020777 Pfam:PF07714 PRINTS:PR00109 PRINTS:PR01939
PRINTS:PR01942 PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS00239
PROSITE:PS50011 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00219
GO:GO:0005524 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004714 SUPFAM:SSF56112 InterPro:IPR003599 SMART:SM00409
InterPro:IPR000483 SMART:SM00082 GO:GO:0007169 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0005030 IPI:IPI00376986 HGNC:HGNC:8033 ChiTaRS:NTRK3
EMBL:AC009711 EMBL:AC011966 EMBL:AC021677 ProteinModelPortal:E9PG56
SMR:E9PG56 Ensembl:ENST00000357724 UCSC:uc010bnh.1
ArrayExpress:E9PG56 Bgee:E9PG56 Uniprot:E9PG56
Length = 831
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 71 LDLSDNFLDRYTFR--KLINLVELDLSYNQIQF-VPSHILDSILELRELKLSGNPIQKIT 127
++LS N L +++ + ++L EL L N + E E KL+ + I
Sbjct: 132 INLSSNRLTTLSWQLFQTLSLRELQLEQNFFNCSCDIRWMQLWQEQGEAKLNSQNLYCIN 191
Query: 128 HEAFINVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKII 186
+ +P + C P I ++T E +N ++C +GSP+P + WI
Sbjct: 192 ADGS-QLPLFRMNISQCDLPEISVSHVNLTVREGDNAVITCNGSGSPLPDVDWIV----- 245
Query: 187 ANISSGLANMNKRQYIIKTINSLS-NLTIVAVTMSDSGI-YTCRAKNGAGEVFTNISLNV 244
+GL ++N Q + N + NLT+V VT D+G TC A+N G +++L V
Sbjct: 246 ----TGLQSINTHQTNLNWTNVHAINLTLVNVTSEDNGFTLTCIAENVVGMSNASVALTV 301
Query: 245 IKVETAVAQPDP 256
V+ +P
Sbjct: 302 YYPPRVVSLEEP 313
>UNIPROTKB|Q16288 [details] [associations]
symbol:NTRK3 "NT-3 growth factor receptor" species:9606
"Homo sapiens" [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004714
"transmembrane receptor protein tyrosine kinase activity"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019056 "modulation by
virus of host transcription" evidence=IEA] [GO:0042490
"mechanoreceptor differentiation" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0046875 "ephrin receptor
binding" evidence=IEA] [GO:0048665 "neuron fate specification"
evidence=IEA] [GO:0048678 "response to axon injury" evidence=IEA]
[GO:0048691 "positive regulation of axon extension involved in
regeneration" evidence=IEA] [GO:0048712 "negative regulation of
astrocyte differentiation" evidence=IEA] [GO:0051412 "response to
corticosterone stimulus" evidence=IEA] [GO:0060548 "negative
regulation of cell death" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0090102 "cochlea
development" evidence=IEA] [GO:0043121 "neurotrophin binding"
evidence=TAS] [GO:0005030 "neurotrophin receptor activity"
evidence=IDA] [GO:0032148 "activation of protein kinase B activity"
evidence=IDA] [GO:0000187 "activation of MAPK activity"
evidence=IDA] [GO:0050927 "positive regulation of positive
chemotaxis" evidence=IDA] [GO:0032856 "activation of Ras GTPase
activity" evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IDA] [GO:0007169 "transmembrane
receptor protein tyrosine kinase signaling pathway" evidence=IDA]
[GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IDA] [GO:0002039 "p53 binding"
evidence=IPI] [GO:0030335 "positive regulation of cell migration"
evidence=IDA] [GO:2000251 "positive regulation of actin
cytoskeleton reorganization" evidence=IDA] [GO:0010628 "positive
regulation of gene expression" evidence=IDA] InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR002011
InterPro:IPR007110 InterPro:IPR008266 InterPro:IPR011009
InterPro:IPR017441 InterPro:IPR020446 InterPro:IPR020635
InterPro:IPR020777 Pfam:PF07714 PRINTS:PR00109 PRINTS:PR01939
PRINTS:PR01942 PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS00239
PROSITE:PS50011 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00219
GO:GO:0005524 GO:GO:0001764 GO:GO:0000139 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0051412 GO:GO:0045471
eggNOG:COG0515 GO:GO:0008284 BRENDA:2.7.10.1 GO:GO:0004714
SUPFAM:SSF56112 GO:GO:0071300 InterPro:IPR003599 SMART:SM00409
InterPro:IPR000483 SMART:SM00082 GO:GO:0048678 GO:GO:0000187
GO:GO:0046777 GO:GO:0007169 Pathway_Interaction_DB:trkrpathway
GO:GO:0032148 GO:GO:0030335 GO:GO:0010628 GO:GO:0060548
GO:GO:0033138 GO:GO:0050927 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0001933
GO:GO:0048665 GO:GO:0090102 GO:GO:0042490 GO:GO:0048712
GO:GO:2000251 InterPro:IPR013151 Pfam:PF00047 Orphanet:2030
GO:GO:0019056 GO:GO:0032856 HOVERGEN:HBG056735 HOGENOM:HOG000264255
CTD:4916 KO:K05101 GO:GO:0005030 EMBL:U05012 EMBL:S76475
EMBL:S76476 EMBL:AJ224521 EMBL:AJ224522 EMBL:AJ224523 EMBL:AJ224524
EMBL:AJ224525 EMBL:AJ224526 EMBL:AJ224527 EMBL:AJ224528
EMBL:AJ224529 EMBL:AJ224530 EMBL:AJ224531 EMBL:AJ224532
EMBL:AJ224533 EMBL:AJ224534 EMBL:AJ224535 IPI:IPI00000824
IPI:IPI00185466 IPI:IPI00289961 IPI:IPI00376986 PIR:A55178
PIR:I73632 PIR:I73633 RefSeq:NP_001012338.1 RefSeq:NP_002521.2
UniGene:Hs.410969 UniGene:Hs.706364 PDB:1WWC PDB:3V5Q PDBsum:1WWC
PDBsum:3V5Q ProteinModelPortal:Q16288 SMR:Q16288 DIP:DIP-5723N
IntAct:Q16288 MINT:MINT-188514 STRING:Q16288 PhosphoSite:Q16288
DMDM:134035335 PaxDb:Q16288 PRIDE:Q16288 DNASU:4916
Ensembl:ENST00000317501 Ensembl:ENST00000355254
Ensembl:ENST00000360948 Ensembl:ENST00000394480
Ensembl:ENST00000540489 GeneID:4916 KEGG:hsa:4916 UCSC:uc002bme.2
UCSC:uc002bmf.2 GeneCards:GC15M088402 HGNC:HGNC:8033 HPA:CAB009233
MIM:191316 neXtProt:NX_Q16288 PharmGKB:PA31819 InParanoid:Q16288
OMA:NFVSIYE PhylomeDB:Q16288 BindingDB:Q16288 ChEMBL:CHEMBL5608
ChiTaRS:NTRK3 EvolutionaryTrace:Q16288 GenomeRNAi:4916
NextBio:18927 ArrayExpress:Q16288 Bgee:Q16288 CleanEx:HS_NTRK3
Genevestigator:Q16288 GermOnline:ENSG00000140538 GO:GO:0043121
GO:GO:0048691 Uniprot:Q16288
Length = 839
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 71 LDLSDNFLDRYTFR--KLINLVELDLSYNQIQF-VPSHILDSILELRELKLSGNPIQKIT 127
++LS N L +++ + ++L EL L N + E E KL+ + I
Sbjct: 132 INLSSNRLTTLSWQLFQTLSLRELQLEQNFFNCSCDIRWMQLWQEQGEAKLNSQNLYCIN 191
Query: 128 HEAFINVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKII 186
+ +P + C P I ++T E +N ++C +GSP+P + WI
Sbjct: 192 ADGS-QLPLFRMNISQCDLPEISVSHVNLTVREGDNAVITCNGSGSPLPDVDWIV----- 245
Query: 187 ANISSGLANMNKRQYIIKTINSLS-NLTIVAVTMSDSGI-YTCRAKNGAGEVFTNISLNV 244
+GL ++N Q + N + NLT+V VT D+G TC A+N G +++L V
Sbjct: 246 ----TGLQSINTHQTNLNWTNVHAINLTLVNVTSEDNGFTLTCIAENVVGMSNASVALTV 301
Query: 245 IKVETAVAQPDP 256
V+ +P
Sbjct: 302 YYPPRVVSLEEP 313
>UNIPROTKB|F1LPH9 [details] [associations]
symbol:Ncam2 "Protein Ncam2" species:10116 "Rattus
norvegicus" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 RGD:1303131 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679
IPI:IPI00409545 Ensembl:ENSRNOT00000031017 ArrayExpress:F1LPH9
Uniprot:F1LPH9
Length = 709
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/106 (33%), Positives = 54/106 (50%)
Query: 136 KLNLEDFACSPNIRP--ITP----DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANI 189
+++ D N+ P + P + TAE E +TL+C+A+GSP P I W K+I
Sbjct: 177 EIDFRDIIVIVNVPPAIVMPQKSFNATAERGEEMTLTCKASGSPDPAISWFRNGKLIEE- 235
Query: 190 SSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE 235
N++ YI+K N+ LT+ + D G Y C+A N AGE
Sbjct: 236 -------NEK-YILKGSNT--ELTVRNIINKDGGSYVCKATNKAGE 271
Score = 120 (47.3 bits), Expect = 0.00043, P = 0.00043
Identities = 41/119 (34%), Positives = 61/119 (51%)
Query: 117 KLSGNPIQKITHEAFINVPKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPK 176
K G+ + K T++A + + L+ F P+I + + T+E N +VTL C A G PVP+
Sbjct: 256 KDGGSYVCKATNKAGEDQKQAFLQVFV-QPHILQLKNETTSE-NGHVTLICEAEGEPVPE 313
Query: 177 IKWIFKEKIIA-NISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAG 234
I W K I S G + + R +K + S+L I V +SDSG Y C A + G
Sbjct: 314 ITW--KRAIDGVTFSEGDKSPDGR-IEVKGQHGRSSLHIRDVKLSDSGRYDCEAASRIG 369
>UNIPROTKB|E1C1K8 [details] [associations]
symbol:E1C1K8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0031102 "neuron projection regeneration"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0048683 "regulation of collateral sprouting of intact axon in
response to injury" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
OMA:SSNKLWT GeneTree:ENSGT00690000102271 EMBL:AADN02025705
IPI:IPI00601952 Ensembl:ENSGALT00000008974 Uniprot:E1C1K8
Length = 434
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 31 VFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN-FLDR-YTFRKLIN 88
V CPS C C G V C +N T +P L L+LS N F+D + + N
Sbjct: 22 VLGICPSNCTCS--GNNRNVDCSGRNLTVLPHGLQDNITYLNLSFNQFVDLDHQLTRFSN 79
Query: 89 LVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI 126
L LD+S N ++ VP+H+ S+ EL + + +QK+
Sbjct: 80 LRTLDISNNWLKNVPAHLPKSLWELYAINNNIKVLQKL 117
>MGI|MGI:97384 [details] [associations]
symbol:Ntrk2 "neurotrophic tyrosine kinase, receptor, type 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IMP]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0004672 "protein
kinase activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] [GO:0004714 "transmembrane receptor protein
tyrosine kinase activity" evidence=ISO] [GO:0005030 "neurotrophin
receptor activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IMP] [GO:0005768 "endosome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0007169 "transmembrane receptor protein tyrosine kinase
signaling pathway" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0007612 "learning" evidence=IMP]
[GO:0007616 "long-term memory" evidence=ISO] [GO:0007631 "feeding
behavior" evidence=IMP] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0010976 "positive regulation of neuron projection
development" evidence=IDA] [GO:0014047 "glutamate secretion"
evidence=IPI] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0019222 "regulation
of metabolic process" evidence=IMP] [GO:0021954 "central nervous
system neuron development" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0030424 "axon" evidence=ISO] [GO:0030425
"dendrite" evidence=ISO] [GO:0030426 "growth cone" evidence=ISO]
[GO:0031547 "brain-derived neurotrophic factor receptor signaling
pathway" evidence=ISO;IDA] [GO:0032314 "regulation of Rac GTPase
activity" evidence=IDA] [GO:0035584 "calcium-mediated signaling
using intracellular calcium source" evidence=IMP] [GO:0042490
"mechanoreceptor differentiation" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043025
"neuronal cell body" evidence=ISO] [GO:0043121 "neurotrophin
binding" evidence=ISO;IDA] [GO:0043195 "terminal bouton"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043408 "regulation of MAPK cascade" evidence=ISO] [GO:0043410
"positive regulation of MAPK cascade" evidence=ISO] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=ISO]
[GO:0043679 "axon terminus" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IDA] [GO:0046548 "retinal rod cell development"
evidence=IMP] [GO:0046777 "protein autophosphorylation"
evidence=ISO] [GO:0046875 "ephrin receptor binding" evidence=ISO]
[GO:0046928 "regulation of neurotransmitter secretion"
evidence=ISO] [GO:0048403 "brain-derived neurotrophic factor
binding" evidence=ISO;IDA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0048786 "presynaptic active
zone" evidence=ISO] [GO:0048935 "peripheral nervous system neuron
development" evidence=IMP] [GO:0050772 "positive regulation of
axonogenesis" evidence=ISO] [GO:0050773 "regulation of dendrite
development" evidence=ISO] [GO:0051896 "regulation of protein
kinase B signaling cascade" evidence=IMP] [GO:0051968 "positive
regulation of synaptic transmission, glutamatergic" evidence=ISO]
[GO:0060076 "excitatory synapse" evidence=ISO] [GO:0060175
"brain-derived neurotrophic factor-activated receptor activity"
evidence=ISO;IDA] [GO:0060291 "long-term synaptic potentiation"
evidence=IMP] [GO:2000811 "negative regulation of anoikis"
evidence=IDA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR002011 InterPro:IPR007110 InterPro:IPR008266
InterPro:IPR011009 InterPro:IPR017441 InterPro:IPR020455
InterPro:IPR020635 InterPro:IPR020777 Pfam:PF07714 PRINTS:PR00109
PRINTS:PR01939 PRINTS:PR01941 PROSITE:PS00107 PROSITE:PS00109
PROSITE:PS00239 PROSITE:PS50011 PROSITE:PS50835 SMART:SM00219
MGI:MGI:97384 GO:GO:0005829 GO:GO:0005524 GO:GO:0021987
GO:GO:0001764 GO:GO:0042803 GO:GO:0014069 GO:GO:0009986
GO:GO:0000139 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0010976 eggNOG:COG0515 GO:GO:0008284 GO:GO:0007631
GO:GO:0043025 GO:GO:0007612 GO:GO:0060291 GO:GO:0046928
BRENDA:2.7.10.1 SUPFAM:SSF56112 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 GO:GO:0048786 GO:GO:0043195
GO:GO:0043524 GO:GO:0051968 GO:GO:0014068 GO:GO:0046777
GO:GO:0010008 GO:GO:0030426 GO:GO:0050772 GO:GO:0043410
GO:GO:0010628 GO:GO:0001570 GO:GO:0032314 GO:GO:0050773
GeneTree:ENSGT00700000104172 GO:GO:0046548 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0014047 GO:GO:0048709 GO:GO:0060076 GO:GO:0021954
GO:GO:0042490 GO:GO:2000811 GO:GO:0035584 GO:GO:0048935
GO:GO:0051896 HOVERGEN:HBG056735 HOGENOM:HOG000264255 CTD:4915
KO:K04360 OrthoDB:EOG4255S6 GO:GO:0048403 GO:GO:0060175 OMA:YGKDERQ
EMBL:M33385 EMBL:X17647 EMBL:AK018789 EMBL:AK147391 EMBL:AK160789
EMBL:BC052014 IPI:IPI00128360 IPI:IPI00229333 IPI:IPI00229334
IPI:IPI00270098 PIR:A35104 PIR:S06943 RefSeq:NP_001020245.1
RefSeq:NP_032771.1 UniGene:Mm.130054 ProteinModelPortal:P15209
SMR:P15209 DIP:DIP-5722N IntAct:P15209 STRING:P15209
PhosphoSite:P15209 PaxDb:P15209 PRIDE:P15209
Ensembl:ENSMUST00000079828 Ensembl:ENSMUST00000109838 GeneID:18212
KEGG:mmu:18212 UCSC:uc007qui.1 InParanoid:P15209 ChiTaRS:NTRK2
NextBio:293608 Bgee:P15209 CleanEx:MM_NTRK2 Genevestigator:P15209
GermOnline:ENSMUSG00000055254 Uniprot:P15209
Length = 821
Score = 132 (51.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 54/171 (31%), Positives = 87/171 (50%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI--THEAFINVP 135
L R FR L +L +L L+ N F S + + L+E K S + Q + +E+ N+P
Sbjct: 130 LSRRHFRHL-DLSDLILTGNP--FTCSCDIMWLKTLQETKSSPDT-QDLYCLNESSKNMP 185
Query: 136 KLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLA 194
NL+ C P+ R P++T EE ++VTLSC G P+P + W + N+ S
Sbjct: 186 LANLQIPNCGLPSARLAAPNLTVEEGKSVTLSCSVGGDPLPTLYWD-----VGNLVS--K 238
Query: 195 NMNKRQYIIKTINSLSNLTIVAVTMSDSGIY-TCRAKNGAGEVFTNISLNV 244
+MN+ T ++ +L I ++ DSG +C A+N GE +++L V
Sbjct: 239 HMNE------TSHTQGSLRITNISSDDSGKQISCVAENLVGEDQDSVNLTV 283
Score = 44 (20.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 17 RVYIMVLVCTGCLQVFAECPSTCEC 41
R++ + L+ G + CP++C+C
Sbjct: 14 RLWGLCLLVLGFWRASLACPTSCKC 38
>UNIPROTKB|E1BT53 [details] [associations]
symbol:Gga.50987 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035023
"regulation of Rho protein signal transduction" evidence=IEA]
Pfam:PF00169 InterPro:IPR000219 InterPro:IPR000048
InterPro:IPR001452 InterPro:IPR001849 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 Pfam:PF00612 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 PROSITE:PS50096 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00015 SMART:SM00060 SMART:SM00233
SMART:SM00326 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0005622 SUPFAM:SSF50044 GO:GO:0005089 Gene3D:1.20.900.10
SUPFAM:SSF48065 GO:GO:0035023 InterPro:IPR013098 Pfam:PF07679
OMA:CEVGQEK GeneTree:ENSGT00700000104431 EMBL:AADN02000124
EMBL:AADN02000125 EMBL:AADN02000126 EMBL:AADN02000127
EMBL:AADN02000128 IPI:IPI00577658 ProteinModelPortal:E1BT53
Ensembl:ENSGALT00000007577 Uniprot:E1BT53
Length = 6635
Score = 141 (54.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 39/115 (33%), Positives = 60/115 (52%)
Query: 161 ENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMS 220
++ TLSC+ G+P+P + W K+K+ I SG ++ L LTI +++
Sbjct: 25 KDATLSCQIIGNPIPVVSWE-KDKL--PIQSG------GRFKTTEDGDLYQLTIYDLSLE 75
Query: 221 DSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLTTVVTIILTACF 275
DSG Y CRAKN GE F +S+ V + ET V + P ++ + VT+ A F
Sbjct: 76 DSGQYICRAKNTIGEAFAAVSIKVGE-ETTVTESAPYFIQKPSSIKVTLGEDAMF 129
>UNIPROTKB|F1PMS8 [details] [associations]
symbol:NCAM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016020 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00680000099931 EMBL:AAEX03003486
Ensembl:ENSCAFT00000022022 Uniprot:F1PMS8
Length = 709
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 137 LNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
++L+ FA P I + E E VTL+C A+G P+P I W + NISS +
Sbjct: 283 IHLKVFA-KPKITYVENQTAMELEEQVTLTCEASGDPIPTITWRTSTR---NISSEEKTL 338
Query: 197 NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
+ ++++ +S+LT+ ++ +D+G Y C A N G+ ++ L V
Sbjct: 339 DGH-IVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEV 385
>UNIPROTKB|H3BNZ6 [details] [associations]
symbol:ISLR2 "Immunoglobulin superfamily-containing
leucine-rich repeat protein 2" species:9606 "Homo sapiens"
[GO:0009986 "cell surface" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0009986 GO:GO:0045773 InterPro:IPR000372
SMART:SM00013 HGNC:HGNC:29286 EMBL:AC010931 Ensembl:ENST00000561740
Bgee:H3BNZ6 Uniprot:H3BNZ6
Length = 138
Score = 106 (42.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 33/114 (28%), Positives = 46/114 (40%)
Query: 29 LQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRK 85
L V CP C C K + C K +PE L L LS N L R F
Sbjct: 14 LGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSANKITVLRRGAFAD 73
Query: 86 LINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNL 139
+ + L L++N+++ V L + +L+ L LS N I N+ L L
Sbjct: 74 VTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLRNLSALQL 127
>UNIPROTKB|F1S5B4 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:CU929522 EMBL:FP565468 RefSeq:XP_003130662.2
Ensembl:ENSSSCT00000011954 GeneID:100511400 KEGG:ssc:100511400
Uniprot:F1S5B4
Length = 967
Score = 133 (51.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 38/127 (29%), Positives = 55/127 (43%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYT---FRKLINLVE 91
CP+ C C+ G + C + + +P L T LDLS N L FR L L E
Sbjct: 34 CPAPCRCQEDGFMLSADCSERGLSAVPGDLHPLTAYLDLSMNNLTELQPGLFRHLSFLEE 93
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNIRPI 151
L LS N + +P + L+ L L N + I EA +P +L+ N+ +
Sbjct: 94 LRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELP--SLQSLRLDANLISL 151
Query: 152 TPDVTAE 158
PD + E
Sbjct: 152 VPDGSFE 158
Score = 44 (20.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 160 NENVTLS-CRATGSPVPKIKWIFKEKIIANISSGLA 194
N V LS C A P+P +K++ AN +GL+
Sbjct: 579 NGLVLLSLCAAGPGPLPPVKFVVGAIAGANALTGLS 614
>UNIPROTKB|F1LUV9 [details] [associations]
symbol:Ncam1 "Neural cell adhesion molecule 1"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR009138
Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 RGD:67378 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009897 GO:GO:0030424 GO:GO:0043025 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0050850 GO:GO:0030426
GO:GO:0007166 GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679
GO:GO:0034109 GeneTree:ENSGT00680000099931 GO:GO:0001928
IPI:IPI00777130 PRIDE:F1LUV9 Ensembl:ENSRNOT00000047666
ArrayExpress:F1LUV9 Uniprot:F1LUV9
Length = 1108
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 137 LNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
++L+ FA P I + E E VTL+C A+G P+P I W + NISS +
Sbjct: 290 IHLKVFA-KPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTR---NISSEEKTL 345
Query: 197 NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
+ ++++ +S+LT+ ++ +D+G Y C A N G+ ++ L V
Sbjct: 346 DGHM-VVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEV 392
>ZFIN|ZDB-GENE-010822-2 [details] [associations]
symbol:ncam1b "neural cell adhesion molecule 1b"
species:7955 "Danio rerio" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR009138
Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 ZFIN:ZDB-GENE-010822-2 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
InterPro:IPR013098 Pfam:PF07679 KO:K06491 HOGENOM:HOG000074124
HOVERGEN:HBG052579 HSSP:P13596 EMBL:BC162073 EMBL:AY029401
EMBL:HM467819 IPI:IPI00859848 RefSeq:NP_571906.1 UniGene:Dr.12600
SMR:Q90YM2 STRING:Q90YM2 GeneID:114442 KEGG:dre:114442 CTD:114442
InParanoid:Q90YM2 NextBio:20796929 Uniprot:Q90YM2
Length = 1031
Score = 140 (54.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 36/115 (31%), Positives = 57/115 (49%)
Query: 136 KLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIAN---ISSG 192
+L+L+ F P I + T E +E VTL+C ATG P P I W F ++ S
Sbjct: 293 ELSLKVFV-QPKITYLESQTTTEMDEQVTLTCEATGDPTPTITWSFGTRVFTEGEQASWT 351
Query: 193 LANMNKR---QYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
+K + ++++ +S+LT+ +D+G Y C A+N GE +SL V
Sbjct: 352 RPEQHKGPDGEVLVRSDARVSSLTLKYPQYTDAGQYLCTARNAIGETVQPVSLEV 406
Score = 37 (18.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 239 NISL--NVIKVETAVAQPDPVYLVASLTTV 266
N++L ++ +V AV +PV + +S T+V
Sbjct: 890 NVTLLVDLAEVSPAVPSEEPVQVPSSPTSV 919
>UNIPROTKB|A1A4H9 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
SMART:SM00013 EMBL:BC126503 IPI:IPI00706066 RefSeq:NP_001073773.1
UniGene:Bt.34711 ProteinModelPortal:A1A4H9 PRIDE:A1A4H9
GeneID:538452 KEGG:bta:538452 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 InParanoid:A1A4H9 KO:K16665 OrthoDB:EOG4FN4HG
NextBio:20877367 Uniprot:A1A4H9
Length = 521
Score = 129 (50.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 46/169 (27%), Positives = 73/169 (43%)
Query: 22 VLVCT--GCLQVFAECPSTCE--CKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
V++C C Q+ PS C C+ +G + C+A N T P L G L L N
Sbjct: 20 VVLCLLGACFQMLPAAPSGCPQLCRCEG--RLLYCEALNLTEAPHNLS-GLLGLSLRYNS 76
Query: 78 LDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
L F L+ L L L +N I V + ++EL LS N I ++ + F +
Sbjct: 77 LSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPM 136
Query: 135 PKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE 183
P L D + + ++ + PD+ + TL RA ++ IF++
Sbjct: 137 PNLRSVDLSYN-KLQALAPDLFHGLRKLTTLHMRANAIQFVPVR-IFQD 183
>UNIPROTKB|I3L5J3 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 KO:K16665 OMA:EPDLFHG EMBL:CU928791
RefSeq:XP_003125000.1 Ensembl:ENSSSCT00000025495 GeneID:100520483
KEGG:ssc:100520483 Uniprot:I3L5J3
Length = 522
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 46/169 (27%), Positives = 73/169 (43%)
Query: 22 VLVCT--GCLQVFAECPSTCE--CKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
V++C C Q+ PS C C+ +G + C+A N T P L G L L N
Sbjct: 20 VVLCLLGACFQMLPAAPSGCPQLCRCEG--RLLYCEALNLTEAPHNLS-GLLGLSLRYNS 76
Query: 78 LDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
L F L+ L L L +N I V + ++EL LS N I ++ + F +
Sbjct: 77 LSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPM 136
Query: 135 PKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE 183
P L D + + ++ + PD+ + TL RA ++ IF++
Sbjct: 137 PNLRSVDLSYN-KLQALAPDLFHGLRKLTTLHMRANAIQFVPVR-IFQD 183
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 134 (52.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 37/123 (30%), Positives = 68/123 (55%)
Query: 26 TGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYT--- 82
+G ++ ++CP+ C C+ G TV C + IP + + T L L+DN L R +
Sbjct: 534 SGECRMDSDCPAMCHCE--G--TTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDG 589
Query: 83 -FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL---N 138
F +L +LV+L+L NQ+ + + + ++EL+L N I++I+++ F+ + +L N
Sbjct: 590 LFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 649
Query: 139 LED 141
L D
Sbjct: 650 LYD 652
>UNIPROTKB|J9NSB7 [details] [associations]
symbol:NTRK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005030 "neurotrophin receptor activity"
evidence=IEA] [GO:0004714 "transmembrane receptor protein tyrosine
kinase activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR020446 InterPro:IPR020777
PRINTS:PR01939 PRINTS:PR01942 PROSITE:PS50835 PROSITE:PS51450
GO:GO:0005524 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004714 InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
SMART:SM00082 GO:GO:0007169 GeneTree:ENSGT00700000104172
InterPro:IPR013098 Pfam:PF07679 GO:GO:0005030 EMBL:AAEX03002312
EMBL:AAEX03002313 Ensembl:ENSCAFT00000046792 Uniprot:J9NSB7
Length = 555
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 71 LDLSDNFLDRYTFR--KLINLVELDLSYNQIQF-VPSHILDSILELRELKLSGNPIQKIT 127
++LS N L +++ + ++L EL L N + E E KL+ + I
Sbjct: 76 INLSSNRLTTLSWQLFQTLSLRELRLEQNFFNCSCDIRWMQLWQEQGEAKLNNQHLYCIN 135
Query: 128 HEAFINVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKII 186
+ +P + C P I ++T E +N ++C +GSP+P + WI
Sbjct: 136 ADGS-QLPLFRMNISQCDLPEISVSHVNLTVREGDNAVITCNGSGSPLPDVDWIV----- 189
Query: 187 ANISSGLANMNKRQYIIKTINSLS-NLTIVAVTMSDSGI-YTCRAKNGAGEVFTNISLNV 244
+GL ++N Q + N + NLT+V VT D+G TC A+N G +++L V
Sbjct: 190 ----TGLQSINTHQTNLNWTNVHAINLTLVNVTSEDNGFTLTCIAENVVGMSNASVALTV 245
Query: 245 IKVETAVAQPDP 256
V+ +P
Sbjct: 246 HYPPRVVSLEEP 257
>UNIPROTKB|K7GLK2 [details] [associations]
symbol:VCAM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR003989 InterPro:IPR007110
PRINTS:PR01474 PROSITE:PS50835 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 GeneTree:ENSGT00700000104014
EMBL:CU467566 Ensembl:ENSSSCT00000035678 Uniprot:K7GLK2
Length = 142
Score = 105 (42.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 151 ITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLS 210
+ P T EE +V ++C + G P PKI W S L + N ++ ++ +
Sbjct: 10 VNPSSTLEEGSSVNMTCSSDGFPAPKILW----------SKKLRDGN-----LEPLSENT 54
Query: 211 NLTIVAVTMSDSGIYTCRAKNGAG 234
LT+ + M DSGIY C N AG
Sbjct: 55 TLTLTSTKMEDSGIYVCEGINQAG 78
>UNIPROTKB|P0C6S8 [details] [associations]
symbol:LINGO3 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
eggNOG:NOG278536 HOGENOM:HOG000246971 HOVERGEN:HBG057546
EMBL:AC004152 IPI:IPI00376131 RefSeq:NP_001094861.1
UniGene:Hs.371587 ProteinModelPortal:P0C6S8 SMR:P0C6S8
PhosphoSite:P0C6S8 DMDM:182662399 PRIDE:P0C6S8
Ensembl:ENST00000404279 GeneID:645191 KEGG:hsa:645191
UCSC:uc010dsx.1 CTD:645191 GeneCards:GC19M002289 H-InvDB:HIX0202769
HGNC:HGNC:21206 MIM:609792 neXtProt:NX_P0C6S8 PharmGKB:PA162394097
InParanoid:P0C6S8 OMA:EIDNWPL OrthoDB:EOG4THVSV GenomeRNAi:645191
NextBio:117179 Bgee:P0C6S8 CleanEx:HS_LINGO3 Genevestigator:P0C6S8
Uniprot:P0C6S8
Length = 592
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 41/128 (32%), Positives = 59/128 (46%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRKLINLVE 91
CP+ CEC + V C + T +P+ + T++L+LS N L+ L L E
Sbjct: 25 CPARCECTVQ--TRAVACTRRRLTAVPDGIPAETRLLELSRNRIRCLNPGDLAALPALEE 82
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNIRPI 151
LDLS N I V ++ LR L+L GN ++ I F + L L D S N I
Sbjct: 83 LDLSENAIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDL--SENKLVI 140
Query: 152 TPDVTAEE 159
D T ++
Sbjct: 141 LLDYTFQD 148
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 62/234 (26%), Positives = 91/234 (38%)
Query: 69 QVLDLSDNFL---DRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGN-PI- 123
++L+LS+N L + TF + L L + N + +L + + L G P
Sbjct: 321 RLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLA-CDCRLLWIVQRRKTLNFDGRLPAC 379
Query: 124 ---QKITHEAFINVPKLNL-EDFAC-SPNIRPITPD-VTAEENENVTLSCRATGSPVPKI 177
++ +A N+P L E F C P IR VTA E+V CRA G P P +
Sbjct: 380 ATPAEVRGDALRNLPDSVLFEYFVCRKPKIRERRLQRVTATAGEDVRFLCRAEGEPAPTV 439
Query: 178 KWIFKE-KIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEV 236
W+ + + + S+G A + L I DSG YTC A N G
Sbjct: 440 AWVTPQHRPVTATSAGRARVLPG----------GTLEIQDARPQDSGTYTCVASNAGGND 489
Query: 237 FTNISLNVIKVETAVAQPDPVY---LVA-----SLTTVVTIILTACFVVLCIIL 282
+L V A P + L A LTT++ C L ++L
Sbjct: 490 TYFATLTVRPEPAANRTPGEAHNETLAALRAPLDLTTILVSTAMGCITFLGVVL 543
>UNIPROTKB|D4A013 [details] [associations]
symbol:Ntrk3 "NT-3 growth factor receptor" species:10116
"Rattus norvegicus" [GO:0004714 "transmembrane receptor protein
tyrosine kinase activity" evidence=IEA] [GO:0005030 "neurotrophin
receptor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0007169 "transmembrane receptor protein tyrosine
kinase signaling pathway" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR020446 InterPro:IPR020777
PRINTS:PR01939 PRINTS:PR01942 PROSITE:PS50835 PROSITE:PS51450
RGD:3214 GO:GO:0005524 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0004714 InterPro:IPR003599 SMART:SM00409
InterPro:IPR000483 SMART:SM00082 GO:GO:0007169 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0005030 IPI:IPI00192842 ProteinModelPortal:D4A013
PRIDE:D4A013 Ensembl:ENSRNOT00000025276 ArrayExpress:D4A013
Uniprot:D4A013
Length = 500
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 49/192 (25%), Positives = 85/192 (44%)
Query: 71 LDLSDNFLDRYTFR--KLINLVELDLSYNQIQF-VPSHILDSILELRELKLSGNPIQKIT 127
++LS N L +++ + ++L EL L N + E E +L + I+
Sbjct: 132 INLSSNRLTTLSWQLFQTLSLRELRLEQNFFNCSCDIRWMQLWQEQGEARLDSQSLYCIS 191
Query: 128 HEAFINVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKII 186
+ +P + C P I ++T E +N ++C +GSP+P + WI
Sbjct: 192 ADGS-QLPLFRMNISQCDLPEISVSHVNLTVREGDNAVITCNGSGSPLPDVDWIV----- 245
Query: 187 ANISSGLANMNKRQYIIKTINSLS-NLTIVAVTMSDSGI-YTCRAKNGAGEVFTNISLNV 244
+GL ++N Q + N + NLT+V VT D+G TC A+N G +++L V
Sbjct: 246 ----TGLQSINTHQTNLNWTNVHAINLTLVNVTSEDNGFTLTCIAENVVGMSNASVALTV 301
Query: 245 IKVETAVAQPDP 256
V+ +P
Sbjct: 302 YYPPRVVSLVEP 313
>UNIPROTKB|Q8N967 [details] [associations]
symbol:LRTM2 "Leucine-rich repeat and transmembrane
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 EMBL:CH471116 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 HSSP:P07359 HOGENOM:HOG000290674
EMBL:AK095610 EMBL:AK124687 EMBL:BC146894 EMBL:BC146910
EMBL:BC150568 IPI:IPI00167619 RefSeq:NP_001034118.1
RefSeq:NP_001157397.1 RefSeq:NP_001157398.1 UniGene:Hs.585579
ProteinModelPortal:Q8N967 SMR:Q8N967 STRING:Q8N967
PhosphoSite:Q8N967 DMDM:74760021 PRIDE:Q8N967
Ensembl:ENST00000299194 Ensembl:ENST00000535041
Ensembl:ENST00000543818 GeneID:654429 KEGG:hsa:654429
UCSC:uc001qjt.2 CTD:654429 GeneCards:GC12P001929 HGNC:HGNC:32443
neXtProt:NX_Q8N967 PharmGKB:PA142671500 eggNOG:NOG248110
HOVERGEN:HBG081938 InParanoid:Q8N967 OMA:GEHEDQK OrthoDB:EOG4C5CKK
PhylomeDB:Q8N967 GenomeRNAi:654429 NextBio:123980
ArrayExpress:Q8N967 Bgee:Q8N967 CleanEx:HS_LRTM2
Genevestigator:Q8N967 GermOnline:ENSG00000166159 Uniprot:Q8N967
Length = 370
Score = 126 (49.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 36/134 (26%), Positives = 60/134 (44%)
Query: 15 EWRV--YIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLD 72
+WR +I + ++ CP +C+C + + V C TT+P + T+ L
Sbjct: 17 QWRQVSWITCWIALYAVEALPTCPFSCKCDSRSLE--VDCSGLGLTTVPPDVPAATRTLL 74
Query: 73 LSDNFLDR---YTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHE 129
L +N L + F L +L LDLS N + +P I + L EL+L N I+ + +
Sbjct: 75 LLNNKLSALPSWAFANLSSLQRLDLSNNFLDRLPRSIFGDLTNLTELQLRNNSIRTLDRD 134
Query: 130 AFINVPKLNLEDFA 143
+ P L D +
Sbjct: 135 LLRHSPLLRHLDLS 148
>UNIPROTKB|F1SRS9 [details] [associations]
symbol:NTRK3 "Tyrosine-protein kinase receptor"
species:9823 "Sus scrofa" [GO:0048691 "positive regulation of axon
extension involved in regeneration" evidence=IEA] [GO:0042490
"mechanoreceptor differentiation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004714 "transmembrane receptor
protein tyrosine kinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA] [GO:0005030
"neurotrophin receptor activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR002011
InterPro:IPR007110 InterPro:IPR008266 InterPro:IPR011009
InterPro:IPR017441 InterPro:IPR020446 InterPro:IPR020635
InterPro:IPR020777 Pfam:PF07714 PRINTS:PR00109 PRINTS:PR01939
PRINTS:PR01942 PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS00239
PROSITE:PS50011 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00219
GO:GO:0005524 GO:GO:0005737 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0004714 SUPFAM:SSF56112 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 SMART:SM00082 GO:GO:0007169
GeneTree:ENSGT00700000104172 InterPro:IPR013098 Pfam:PF07679
GO:GO:0042490 GO:GO:0005030 OMA:NFVSIYE GO:GO:0048691 EMBL:CU062610
EMBL:CU424465 Ensembl:ENSSSCT00000005628 ArrayExpress:F1SRS9
Uniprot:F1SRS9
Length = 740
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 50/192 (26%), Positives = 86/192 (44%)
Query: 71 LDLSDNFLDRYTFR--KLINLVELDLSYNQIQF-VPSHILDSILELRELKLSGNPIQKIT 127
++LS N L +++ + ++L EL L N + E E KL+ + I+
Sbjct: 49 INLSSNRLTTLSWQLFQTLSLRELRLEQNFFNCSCDIRWMQLWQEQGEAKLNSQSLYCIS 108
Query: 128 HEAFINVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKII 186
+ +P + C P I ++T E +N ++C +GSP+P + WI
Sbjct: 109 ADGS-QLPLFRMNISQCDLPEISVSHVNLTVREGDNAVVTCNGSGSPLPDVDWIV----- 162
Query: 187 ANISSGLANMNKRQYIIKTINSLS-NLTIVAVTMSDSGI-YTCRAKNGAGEVFTNISLNV 244
+GL ++N Q + N + NLT+V VT D+G TC A+N G +++L V
Sbjct: 163 ----TGLQSINTHQTNLNWTNVHAINLTLVNVTSEDNGFTLTCIAENVVGMSNASVALTV 218
Query: 245 IKVETAVAQPDP 256
V+ +P
Sbjct: 219 HYPPRVVSLEEP 230
>UNIPROTKB|F1PYP5 [details] [associations]
symbol:NTRK3 "Tyrosine-protein kinase receptor"
species:9615 "Canis lupus familiaris" [GO:0048691 "positive
regulation of axon extension involved in regeneration"
evidence=IEA] [GO:0042490 "mechanoreceptor differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004714
"transmembrane receptor protein tyrosine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007169
"transmembrane receptor protein tyrosine kinase signaling pathway"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0005030 "neurotrophin receptor activity"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR002011 InterPro:IPR007110
InterPro:IPR008266 InterPro:IPR011009 InterPro:IPR017441
InterPro:IPR020446 InterPro:IPR020777 Pfam:PF07714 PRINTS:PR00109
PRINTS:PR01939 PRINTS:PR01942 PROSITE:PS00107 PROSITE:PS00109
PROSITE:PS00239 PROSITE:PS50011 PROSITE:PS50835 PROSITE:PS51450
GO:GO:0005524 GO:GO:0005737 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0004714 SUPFAM:SSF56112 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 SMART:SM00082 GO:GO:0007169
GeneTree:ENSGT00700000104172 InterPro:IPR013098 Pfam:PF07679
GO:GO:0042490 GO:GO:0005030 OMA:NFVSIYE GO:GO:0048691
EMBL:AAEX03002312 EMBL:AAEX03002313 Ensembl:ENSCAFT00000018182
Uniprot:F1PYP5
Length = 613
Score = 129 (50.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 71 LDLSDNFLDRYTFR--KLINLVELDLSYNQIQF-VPSHILDSILELRELKLSGNPIQKIT 127
++LS N L +++ + ++L EL L N + E E KL+ + I
Sbjct: 34 INLSSNRLTTLSWQLFQTLSLRELRLEQNFFNCSCDIRWMQLWQEQGEAKLNNQHLYCIN 93
Query: 128 HEAFINVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKII 186
+ +P + C P I ++T E +N ++C +GSP+P + WI
Sbjct: 94 ADGS-QLPLFRMNISQCDLPEISVSHVNLTVREGDNAVITCNGSGSPLPDVDWIV----- 147
Query: 187 ANISSGLANMNKRQYIIKTINSLS-NLTIVAVTMSDSGI-YTCRAKNGAGEVFTNISLNV 244
+GL ++N Q + N + NLT+V VT D+G TC A+N G +++L V
Sbjct: 148 ----TGLQSINTHQTNLNWTNVHAINLTLVNVTSEDNGFTLTCIAENVVGMSNASVALTV 203
Query: 245 IKVETAVAQPDP 256
V+ +P
Sbjct: 204 HYPPRVVSLEEP 215
>UNIPROTKB|E2R115 [details] [associations]
symbol:CD226 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060369 "positive regulation of Fc receptor
mediated stimulatory signaling pathway" evidence=IEA] [GO:0050839
"cell adhesion molecule binding" evidence=IEA] [GO:0033005
"positive regulation of mast cell activation" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] [GO:0002891 "positive regulation of immunoglobulin
mediated immune response" evidence=IEA] [GO:0002860 "positive
regulation of natural killer cell mediated cytotoxicity directed
against tumor cell target" evidence=IEA] [GO:0001816 "cytokine
production" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR013106 Pfam:PF07686
GO:GO:0001816 CTD:10666 KO:K06567 OMA:EDIYVNY GO:GO:0060369
GO:GO:0002891 GO:GO:0033005 GO:GO:0002860
GeneTree:ENSGT00500000044993 EMBL:AAEX03000069 RefSeq:XP_851505.2
ProteinModelPortal:E2R115 Ensembl:ENSCAFT00000000056 GeneID:609196
KEGG:cfa:609196 NextBio:20894808 Uniprot:E2R115
Length = 333
Score = 125 (49.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 46/177 (25%), Positives = 82/177 (46%)
Query: 150 PITPDVTAEENENVTLSCRATGS-PVPKIKW--IFKEKI----IANISSGLANMNKRQYI 202
P + +E +NVTL+C+ G PV ++ W I +I I N+S G + +K Q
Sbjct: 136 PSNRHIVSEPGKNVTLTCQPAGKWPVQQVTWEKIQPHQIDILTICNLSQGKSYASKYQRE 195
Query: 203 IKTINSL---SNLTIVA-VTMSDSGIYTC--RAKNGAGEVFTNISLNVIKVETAVAQPDP 256
I + S S I+ VT SDSG+Y C +A G E F V+++ + D
Sbjct: 196 IWSSCSQDMRSTFIIMPHVTASDSGLYRCCFKASTGDSETF------VMRLTVTDGKTDN 249
Query: 257 VYLVASLTTVVTIILTACFVVLCIILLKAKRKRYADVNRRY--LEDKCESNHQQSKP 311
Y++ V ++L + I++ +R+R ++ + ++K +N++ P
Sbjct: 250 QYILFVAGGAVLLLLLVILITTIIVISYKRRRRQKELFKESWGAQNKAGNNYRNPNP 306
>UNIPROTKB|Q86UE6 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007610 "behavior" evidence=IEA] [GO:0035418 "protein
localization to synapse" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IEA] [GO:0060076 "excitatory synapse"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030426
"growth cone" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 EMBL:CH471053 GO:GO:0007610 GO:GO:0030054
GO:GO:0045211 GO:GO:0030424 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0035418 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG EMBL:AY182024
EMBL:AK056644 EMBL:AK290512 EMBL:AY358310 EMBL:BC045113
IPI:IPI00328716 RefSeq:NP_849161.2 UniGene:Hs.591580
ProteinModelPortal:Q86UE6 SMR:Q86UE6 MINT:MINT-7027295
STRING:Q86UE6 PhosphoSite:Q86UE6 DMDM:146330009 PRIDE:Q86UE6
DNASU:347730 Ensembl:ENST00000295057 Ensembl:ENST00000409148
Ensembl:ENST00000417012 Ensembl:ENST00000433224 GeneID:347730
KEGG:hsa:347730 UCSC:uc002sok.1 GeneCards:GC02M080427
H-InvDB:HIX0002207 HGNC:HGNC:19408 MIM:610867 neXtProt:NX_Q86UE6
PharmGKB:PA134887293 InParanoid:Q86UE6 OMA:EPDLFHG PhylomeDB:Q86UE6
GenomeRNAi:347730 NextBio:99250 ArrayExpress:Q86UE6 Bgee:Q86UE6
CleanEx:HS_LRRTM1 Genevestigator:Q86UE6 GermOnline:ENSG00000162951
Uniprot:Q86UE6
Length = 522
Score = 128 (50.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 46/169 (27%), Positives = 73/169 (43%)
Query: 22 VLVCT--GCLQVFAECPSTCE--CKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
V++C C Q+ PS C C+ +G + C+A N T P L G L L N
Sbjct: 20 VVLCLLGACFQMLPAAPSGCPQLCRCEG--RLLYCEALNLTEAPHNLS-GLLGLSLRYNS 76
Query: 78 LDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
L F L+ L L L +N I V + ++EL LS N I ++ + F +
Sbjct: 77 LSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPM 136
Query: 135 PKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE 183
P L D + + ++ + PD+ + TL RA ++ IF++
Sbjct: 137 PNLRSVDLSYN-KLQALAPDLFHGLRKLTTLHMRANAIQFVPVR-IFQD 183
>UNIPROTKB|P24786 [details] [associations]
symbol:NTRK3 "NT-3 growth factor receptor" species:9823
"Sus scrofa" [GO:0004714 "transmembrane receptor protein tyrosine
kinase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007169
"transmembrane receptor protein tyrosine kinase signaling pathway"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0005030 "neurotrophin receptor activity"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR002011 InterPro:IPR007110
InterPro:IPR008266 InterPro:IPR011009 InterPro:IPR017441
InterPro:IPR020446 InterPro:IPR020635 InterPro:IPR020777
Pfam:PF07714 PRINTS:PR00109 PRINTS:PR01939 PRINTS:PR01942
PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS00239 PROSITE:PS50011
PROSITE:PS50835 PROSITE:PS51450 SMART:SM00219 GO:GO:0005524
GO:GO:0007399 GO:GO:0030154 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 eggNOG:COG0515 BRENDA:2.7.10.1 GO:GO:0004714
SUPFAM:SSF56112 InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
SMART:SM00082 GO:GO:0007169 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOVERGEN:HBG056735
HOGENOM:HOG000264255 CTD:4916 KO:K05101 GO:GO:0005030
OrthoDB:EOG4W3SM8 EMBL:M80800 PIR:A40026 RefSeq:NP_999436.1
UniGene:Ssc.16303 ProteinModelPortal:P24786 SMR:P24786
STRING:P24786 GeneID:397511 KEGG:ssc:397511 Uniprot:P24786
Length = 825
Score = 130 (50.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 50/192 (26%), Positives = 86/192 (44%)
Query: 71 LDLSDNFLDRYTFR--KLINLVELDLSYNQIQF-VPSHILDSILELRELKLSGNPIQKIT 127
++LS N L +++ + ++L EL L N + E E KL+ + I+
Sbjct: 132 INLSSNRLTTLSWQLFQTLSLRELRLEQNFFNCSCDIRWMQLWQEQGEAKLNSQSLYCIS 191
Query: 128 HEAFINVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKII 186
+ +P + C P I ++T E +N ++C +GSP+P + WI
Sbjct: 192 ADGS-QLPLFRMNISQCDLPEISVSHVNLTVREGDNAVVTCNGSGSPLPDVDWIV----- 245
Query: 187 ANISSGLANMNKRQYIIKTINSLS-NLTIVAVTMSDSGI-YTCRAKNGAGEVFTNISLNV 244
+GL ++N Q + N + NLT+V VT D+G TC A+N G +++L V
Sbjct: 246 ----TGLQSINTHQTNLNWTNVHAINLTLVNVTSEDNGFTLTCIAENVVGMSNASVALTV 301
Query: 245 IKVETAVAQPDP 256
V+ +P
Sbjct: 302 HYPPRVVSLEEP 313
>RGD|708433 [details] [associations]
symbol:Cdon "cell adhesion associated, oncogene regulated"
species:10116 "Rattus norvegicus" [GO:0001708 "cell fate
specification" evidence=IEA;ISO] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=IEA;ISO] [GO:0002088 "lens
development in camera-type eye" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0007155 "cell adhesion"
evidence=IMP] [GO:0007224 "smoothened signaling pathway"
evidence=IEA;ISO;IDA] [GO:0007520 "myoblast fusion"
evidence=IEA;ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0009986 "cell surface"
evidence=IDA] [GO:0010172 "embryonic body morphogenesis"
evidence=IEA;ISO] [GO:0014816 "satellite cell differentiation"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA;ISO]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IEA;ISO]
[GO:0043497 "regulation of protein heterodimerization activity"
evidence=IEA;ISO] [GO:0045664 "regulation of neuron
differentiation" evidence=ISO] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048598 "embryonic morphogenesis"
evidence=ISO] [GO:0048643 "positive regulation of skeletal muscle
tissue development" evidence=IEA;ISO] [GO:0051057 "positive
regulation of small GTPase mediated signal transduction"
evidence=IEA;ISO] [GO:0051146 "striated muscle cell
differentiation" evidence=ISO] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IEA;ISO] [GO:2000179
"positive regulation of neural precursor cell proliferation"
evidence=IEA;ISO] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
RGD:708433 GO:GO:0016021 GO:GO:0001708 GO:GO:0021987 GO:GO:0009986
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009952 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0045944 GO:GO:0007155 GO:GO:0007520 GO:GO:0043410
GO:GO:0045666 GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679
GO:GO:0010172 GO:GO:0007224 GO:GO:2000179 GO:GO:0043497
GO:GO:0051057 GO:GO:0060059 GO:GO:0002088 CTD:50937
eggNOG:NOG150729 HOGENOM:HOG000060072 HOVERGEN:HBG081073
OrthoDB:EOG4GTKC2 GO:GO:0048643 GO:GO:0014816 EMBL:AF004840
IPI:IPI00206284 IPI:IPI00758456 PIR:T03096 RefSeq:NP_059054.1
UniGene:Rn.10818 ProteinModelPortal:O35158 SMR:O35158
MINT:MINT-5117456 STRING:O35158 PRIDE:O35158 GeneID:50938
KEGG:rno:50938 UCSC:RGD:708433 InParanoid:O35158 NextBio:610598
ArrayExpress:O35158 Genevestigator:O35158
GermOnline:ENSRNOG00000011789 Uniprot:O35158
Length = 1256
Score = 131 (51.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 43/135 (31%), Positives = 61/135 (45%)
Query: 136 KLNLE-DFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLA 194
+L +E D P I +V + + VTLSC ATG PVP I W + +I + S +
Sbjct: 394 RLQIEQDSGQRPVIVTAPANVEVTDGDFVTLSCNATGEPVPVIHWYGRHGLITSHPSQVL 453
Query: 195 NMNKRQ--------------YIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNI 240
R+ Y+I + S+L+I AVT +G YTC A N G +
Sbjct: 454 RSKSRKSHLFRPGDLDPEPVYLIMSQAGSSSLSIQAVTREHAGKYTCEAVNKHGSTQSEA 513
Query: 241 SLNVIKVETAV-AQP 254
L V+ ET A+P
Sbjct: 514 FLTVVPFETNTKAEP 528
Score = 47 (21.6 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 243 NVIKVETAVAQPDPVYLVASLTTVVTIILTACFVVLCI 280
NV + D +YL+ V +++ F+ LC+
Sbjct: 948 NVGPATSPARSSDMLYLIVGCVLGVMVLILLVFIALCL 985
>ZFIN|ZDB-GENE-050309-74 [details] [associations]
symbol:im:7148400 "im:7148400" species:7955 "Danio
rerio" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00041 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00220 ZFIN:ZDB-GENE-050309-74 GO:GO:0005524
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
SUPFAM:SSF56112 GO:GO:0004674 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR020675 PANTHER:PTHR22964 GeneTree:ENSGT00680000099521
EMBL:CU062431 IPI:IPI00961177 ProteinModelPortal:F1QPV1
Ensembl:ENSDART00000113441 Bgee:F1QPV1 Uniprot:F1QPV1
Length = 856
Score = 130 (50.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 34/137 (24%), Positives = 68/137 (49%)
Query: 109 SILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNIRPITPDVTAEENENVTLSCR 168
+IL E S +P+ + T +A ++ +L L+ C P D++ + +V LSC
Sbjct: 732 AILSKPEASASTSPVHE-TEQALQSL-ELKLQ---CKPEFSKTPSDLSVPQGSSVHLSCL 786
Query: 169 ATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCR 228
TG P P++ W+ ++ + + G ++ + + L + V+++ SG+Y+C+
Sbjct: 787 ITGYPDPEVVWL-RDGELLELQGGSVTVDYEE------DGSCTLILNNVSLNHSGLYSCK 839
Query: 229 AKNGAGEVFTNISLNVI 245
A N GE + +L V+
Sbjct: 840 ATNALGEALCSATLTVV 856
>UNIPROTKB|F1PMU4 [details] [associations]
symbol:NCAM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016020 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00680000099931 OMA:DVTCYFL EMBL:AAEX03003486
Ensembl:ENSCAFT00000022012 Uniprot:F1PMU4
Length = 1100
Score = 131 (51.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 137 LNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
++L+ FA P I + E E VTL+C A+G P+P I W + NISS +
Sbjct: 298 IHLKVFA-KPKITYVENQTAMELEEQVTLTCEASGDPIPTITWRTSTR---NISSEEKTL 353
Query: 197 NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
+ ++++ +S+LT+ ++ +D+G Y C A N G+ ++ L V
Sbjct: 354 DGH-IVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEV 400
>UNIPROTKB|Q16620 [details] [associations]
symbol:NTRK2 "BDNF/NT-3 growth factors receptor"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007568 "aging" evidence=IEA] [GO:0007616
"long-term memory" evidence=IEA] [GO:0007631 "feeding behavior"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010996
"response to auditory stimulus" evidence=IEA] [GO:0014047
"glutamate secretion" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0030426 "growth cone" evidence=IEA]
[GO:0035584 "calcium-mediated signaling using intracellular calcium
source" evidence=IEA] [GO:0042490 "mechanoreceptor differentiation"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0043195 "terminal bouton" evidence=IEA] [GO:0046548 "retinal
rod cell development" evidence=IEA] [GO:0046875 "ephrin receptor
binding" evidence=IEA] [GO:0046928 "regulation of neurotransmitter
secretion" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0048786 "presynaptic active
zone" evidence=IEA] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA] [GO:0050773 "regulation of dendrite
development" evidence=IEA] [GO:0051896 "regulation of protein
kinase B signaling cascade" evidence=IEA] [GO:0051968 "positive
regulation of synaptic transmission, glutamatergic" evidence=IEA]
[GO:0060076 "excitatory synapse" evidence=IEA] [GO:0060291
"long-term synaptic potentiation" evidence=IEA] [GO:2000811
"negative regulation of anoikis" evidence=IEA] [GO:0010008
"endosome membrane" evidence=IEA] [GO:0060175 "brain-derived
neurotrophic factor-activated receptor activity" evidence=IMP]
[GO:0031547 "brain-derived neurotrophic factor receptor signaling
pathway" evidence=IMP] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0043121 "neurotrophin binding" evidence=ISS;IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0043410
"positive regulation of MAPK cascade" evidence=ISS] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=ISS]
[GO:0046777 "protein autophosphorylation" evidence=ISS] [GO:0050772
"positive regulation of axonogenesis" evidence=ISS] [GO:0042803
"protein homodimerization activity" evidence=ISS] [GO:0048403
"brain-derived neurotrophic factor binding" evidence=ISS]
[GO:0001764 "neuron migration" evidence=ISS] [GO:0007612 "learning"
evidence=ISS] [GO:0010628 "positive regulation of gene expression"
evidence=ISS] [GO:0010976 "positive regulation of neuron projection
development" evidence=ISS] [GO:0021954 "central nervous system
neuron development" evidence=ISS] [GO:0021987 "cerebral cortex
development" evidence=ISS] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0032314 "regulation of Rac GTPase activity"
evidence=ISS] [GO:0007169 "transmembrane receptor protein tyrosine
kinase signaling pathway" evidence=TAS] [GO:0007190 "activation of
adenylate cyclase activity" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR002011 InterPro:IPR007110
InterPro:IPR008266 InterPro:IPR011009 InterPro:IPR017441
InterPro:IPR020455 InterPro:IPR020635 InterPro:IPR020777
Pfam:PF07714 PRINTS:PR00109 PRINTS:PR01939 PRINTS:PR01941
PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS00239 PROSITE:PS50011
PROSITE:PS50835 SMART:SM00219 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021987 GO:GO:0001764
GO:GO:0042803 GO:GO:0014069 GO:GO:0009986 GO:GO:0000139
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0010976
eggNOG:COG0515 GO:GO:0008284 GO:GO:0007631 GO:GO:0043025
GO:GO:0007612 GO:GO:0060291 GO:GO:0046928 BRENDA:2.7.10.1
SUPFAM:SSF56112 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
SMART:SM00082 GO:GO:0048786 GO:GO:0043195 GO:GO:0007190
GO:GO:0043524 GO:GO:0051968 GO:GO:0014068 GO:GO:0046777
GO:GO:0010008 GO:GO:0030426 Pathway_Interaction_DB:trkrpathway
GO:GO:0050772 GO:GO:0043410 GO:GO:0010628 GO:GO:0001570
GO:GO:0032314 GO:GO:0050773 EMBL:CH471089 GO:GO:0046548
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0014047 GO:GO:0048709 GO:GO:0060076
GO:GO:0021954 GO:GO:0042490 GO:GO:2000811 GO:GO:0035584
GO:GO:0048935 GO:GO:0051896 PDB:1HCF PDBsum:1HCF HOVERGEN:HBG056735
HOGENOM:HOG000264255 CTD:4915 KO:K04360 OrthoDB:EOG4255S6
GO:GO:0048403 GO:GO:0060175 EMBL:U12140 EMBL:S76473 EMBL:S76474
EMBL:X75958 EMBL:AF410899 EMBL:AF410900 EMBL:AF410901 EMBL:AF508964
EMBL:AB209118 EMBL:AK294285 EMBL:AL445532 EMBL:AL390777
EMBL:AL596132 EMBL:BC031835 IPI:IPI00003366 IPI:IPI00179433
IPI:IPI00478527 IPI:IPI00604575 IPI:IPI01010072 PIR:A56853
PIR:I73631 RefSeq:NP_001007098.1 RefSeq:NP_001018074.1
RefSeq:NP_001018075.1 RefSeq:NP_001018076.1 RefSeq:NP_006171.2
UniGene:Hs.494312 PDB:1WWB PDB:4ASZ PDB:4AT3 PDB:4AT4 PDB:4AT5
PDBsum:1WWB PDBsum:4ASZ PDBsum:4AT3 PDBsum:4AT4 PDBsum:4AT5
ProteinModelPortal:Q16620 SMR:Q16620 DIP:DIP-5720N IntAct:Q16620
STRING:Q16620 PhosphoSite:Q16620 DMDM:2497560 PaxDb:Q16620
PRIDE:Q16620 DNASU:4915 Ensembl:ENST00000277120
Ensembl:ENST00000304053 Ensembl:ENST00000323115
Ensembl:ENST00000359847 Ensembl:ENST00000376208
Ensembl:ENST00000376213 Ensembl:ENST00000376214
Ensembl:ENST00000395866 Ensembl:ENST00000395882 GeneID:4915
KEGG:hsa:4915 UCSC:uc004aoa.1 UCSC:uc011lta.2 GeneCards:GC09P087283
HGNC:HGNC:8032 HPA:CAB010346 HPA:HPA007637 MIM:600456 MIM:613886
neXtProt:NX_Q16620 PharmGKB:PA31818 OMA:YGKDERQ BindingDB:Q16620
ChEMBL:CHEMBL4898 EvolutionaryTrace:Q16620 GenomeRNAi:4915
NextBio:18915 ArrayExpress:Q16620 Bgee:Q16620 CleanEx:HS_NTRK2
Genevestigator:Q16620 GermOnline:ENSG00000148053 Uniprot:Q16620
Length = 822
Score = 135 (52.6 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 55/171 (32%), Positives = 85/171 (49%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI--THEAFINVP 135
L R FR L +L EL L N F S + I L+E K S + Q + +E+ N+P
Sbjct: 130 LSRKHFRHL-DLSELILVGNP--FTCSCDIMWIKTLQEAKSSPDT-QDLYCLNESSKNIP 185
Query: 136 KLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLA 194
NL+ C P+ P++T EE +++TLSC G PVP + W + N+ S
Sbjct: 186 LANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNMYWD-----VGNLVS--K 238
Query: 195 NMNKRQYIIKTINSLSNLTIVAVTMSDSGIY-TCRAKNGAGEVFTNISLNV 244
+MN+ T ++ +L I ++ DSG +C A+N GE +++L V
Sbjct: 239 HMNE------TSHTQGSLRITNISSDDSGKQISCVAENLVGEDQDSVNLTV 283
Score = 38 (18.4 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 32 FAECPSTCEC 41
FA CP++C+C
Sbjct: 30 FA-CPTSCKC 38
>MGI|MGI:97281 [details] [associations]
symbol:Ncam1 "neural cell adhesion molecule 1" species:10090
"Mus musculus" [GO:0001928 "regulation of exocyst assembly"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007166 "cell surface receptor
signaling pathway" evidence=IDA] [GO:0007568 "aging" evidence=ISO]
[GO:0007611 "learning or memory" evidence=ISO] [GO:0008201 "heparin
binding" evidence=IEA] [GO:0009897 "external side of plasma
membrane" evidence=ISO;IDA] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010288 "response to lead ion" evidence=ISO]
[GO:0014076 "response to fluoxetine" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019902 "phosphatase binding" evidence=ISO]
[GO:0021794 "thalamus development" evidence=ISO] [GO:0030275 "LRR
domain binding" evidence=ISO] [GO:0030424 "axon" evidence=IDA]
[GO:0030426 "growth cone" evidence=IDA] [GO:0031175 "neuron
projection development" evidence=IGI] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0033555 "multicellular organismal
response to stress" evidence=ISO] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IMP] [GO:0042220 "response to cocaine"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO;IDA]
[GO:0048666 "neuron development" evidence=ISO] [GO:0050850
"positive regulation of calcium-mediated signaling" evidence=IDA]
[GO:0051930 "regulation of sensory perception of pain"
evidence=ISO] [GO:0060045 "positive regulation of cardiac muscle
cell proliferation" evidence=ISO] [GO:0060548 "negative regulation
of cell death" evidence=ISO] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 MGI:MGI:97281 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009897 GO:GO:0030424
GO:GO:0043025 GO:GO:0031225 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 GO:GO:0008201 GO:GO:0050850 GO:GO:0030426
Reactome:REACT_127416 GO:GO:0007166 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 GO:GO:0034109 eggNOG:NOG308439
KO:K06491 CTD:4684 HOVERGEN:HBG052579 OrthoDB:EOG40VVP1
GO:GO:0001928 ChiTaRS:NCAM1 EMBL:Y00051 EMBL:BC011310 EMBL:AK051197
EMBL:AK082621 EMBL:X15049 EMBL:X15051 EMBL:X15052 EMBL:X06328
EMBL:X07195 EMBL:X07197 EMBL:X07198 EMBL:X07200 EMBL:X07244
IPI:IPI00122971 IPI:IPI00230665 IPI:IPI00830721 IPI:IPI01008428
PIR:A29673 RefSeq:NP_001074914.1 RefSeq:NP_001106675.1
RefSeq:NP_035005.2 UniGene:Mm.439182 UniGene:Mm.4974 PDB:2NCM
PDB:3NCM PDBsum:2NCM PDBsum:3NCM ProteinModelPortal:P13595
SMR:P13595 IntAct:P13595 MINT:MINT-1176881 STRING:P13595
PhosphoSite:P13595 PaxDb:P13595 PRIDE:P13595 GeneID:17967
KEGG:mmu:17967 UCSC:uc009pje.2 UCSC:uc009pjf.1 UCSC:uc009pjh.1
InParanoid:P13595 EvolutionaryTrace:P13595 NextBio:292903
Genevestigator:P13595 GermOnline:ENSMUSG00000039542 Uniprot:P13595
Length = 1115
Score = 131 (51.2 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 137 LNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
++L+ FA P I + E E VTL+C A+G P+P I W + NISS +
Sbjct: 301 IHLKVFA-KPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTR---NISSEEKTL 356
Query: 197 NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE 235
+ ++++ +S+LT+ ++ +D+G Y C A N G+
Sbjct: 357 DGHM-VVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQ 394
>UNIPROTKB|F1NWG8 [details] [associations]
symbol:F1NWG8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050808 "synapse organization" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 OMA:IRQCSMI EMBL:AADN02035971
IPI:IPI00583715 Ensembl:ENSGALT00000003872 Uniprot:F1NWG8
Length = 520
Score = 127 (49.8 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 45/168 (26%), Positives = 74/168 (44%)
Query: 18 VYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
+Y M +V + CP C C+ K C ++ F ++P + G+ L L NF
Sbjct: 22 LYAMSMVLKMLPALGMACPPKCRCE----KLLFYCDSQGFHSVPNTTEKGSLGLSLRHNF 77
Query: 78 ---LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
L+R F L L L +NQI V + +L+EL LS N I + + F +
Sbjct: 78 ITELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLPNTTFSQL 137
Query: 135 PKLNLEDFACSPN-IRPITPDVTAEENENVTLSCRATG-SPVP-KIKW 179
LNL++ S N + + P++ + TL R+ +P ++ W
Sbjct: 138 --LNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFW 183
>UNIPROTKB|E1BX56 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007610 "behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030426 "growth cone" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AADN02014722 IPI:IPI00599810 RefSeq:XP_001233729.1
ProteinModelPortal:E1BX56 Ensembl:ENSGALT00000025729 GeneID:771502
KEGG:gga:771502 NextBio:20921702 Uniprot:E1BX56
Length = 521
Score = 127 (49.8 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 41/152 (26%), Positives = 69/152 (45%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
CP C C+ G+ + C++ N T +P L G L L N L F L+ L
Sbjct: 39 CPQLCRCE---GR-LLYCESLNLTEMPRNLS-GMMGLSLRYNSLSELHDGQFTGLMQLTW 93
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNIRPI 151
L L +N I V + + ++EL LS N I ++ + F +P L D + + N++ +
Sbjct: 94 LYLDHNHICSVEGNAFQKLRRVKELTLSSNKITQLPNNTFRPMPNLRSVDLSYN-NLQSL 152
Query: 152 TPDVTAEENENVTLSCRATGSPVPKIKWIFKE 183
PD+ + TL R+ ++ IF++
Sbjct: 153 EPDLFHGLRKLTTLHMRSNAIKFVPVR-IFQD 183
>UNIPROTKB|F1PP71 [details] [associations]
symbol:F11R "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR007110 PROSITE:PS50835 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013106 Pfam:PF07686 InterPro:IPR003596 SMART:SM00406
GeneTree:ENSGT00670000097525 OMA:SSPRVEW EMBL:AAEX03018454
Ensembl:ENSCAFT00000020114 Uniprot:F1PP71
Length = 303
Score = 123 (48.4 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 33/124 (26%), Positives = 58/124 (46%)
Query: 153 PDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNK--RQYIIKTINSLS 210
P+V EN+ LSC +G P+++W F + +I+S + NK Y + S S
Sbjct: 40 PEVRVAENKPAKLSCSYSGFSSPRVEWKFAQ---GDITSLVCYNNKITASYEDRVTFSHS 96
Query: 211 NLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLTTVVTII 270
+T +VT D+G+YTC + G + +++ +I + V P + S T+
Sbjct: 97 GITFHSVTRKDTGMYTCMVSDEGGNTYGEVTVKLIVL---VPPSKPTVNIPSSATIGNRA 153
Query: 271 LTAC 274
+ C
Sbjct: 154 VLTC 157
>ZFIN|ZDB-GENE-060616-45 [details] [associations]
symbol:lrit1b "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 1b" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-060616-45 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 HOGENOM:HOG000063714
HOVERGEN:HBG108105 EMBL:CABZ01112650 EMBL:BC117586 IPI:IPI00607359
RefSeq:NP_001036218.1 UniGene:Dr.84695 Ensembl:ENSDART00000127706
GeneID:553432 KEGG:dre:553432 CTD:553432 InParanoid:Q1ED19
NextBio:20880185 Uniprot:Q1ED19
Length = 654
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 61/259 (23%), Positives = 108/259 (41%)
Query: 16 WRVYIMVLVCTGCLQVFAECPSTCECKWK----GGKE-TVLCKAKNFTTIPEQLDVGTQV 70
W V + L C L CP+ C C + G K +VLC + T IP+ +
Sbjct: 7 WGV-ALALCCFPLL--CGSCPAQCSCFYHKLSDGSKSRSVLCNDPDLTDIPDNFPLDASK 63
Query: 71 LDLSDNFLDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKIT 127
L + L R + F++L +L L +S+N + + + L EL++ GN +
Sbjct: 64 LRIEKTSLSRISSAPFQQLSSLEYLWISFNSLSSISPDTFRGLYALDELRMDGNVLTSFP 123
Query: 128 HEAFINVPKLNLEDFACSPNIRPITPDVTAEENENVT---LSCRATGSPVPKI--KWIF- 181
E +++P L L D + I I + T N+T LS + + P++ W
Sbjct: 124 WECLLDMPSLRLLDLH-NNKISSIPAEATLYIR-NLTYLDLSSNSLTTVPPEVLMSWFSP 181
Query: 182 KEKIIANISSGLANM--NKRQYIIKTIN--SLSNLTIVAVTMSDSGIYTCRAKNGAGEVF 237
K + A S + + N Q + + +V D+G+ ++ +G +F
Sbjct: 182 KPPLDAEGSRMILGLHDNPWQCDCRLFDLVQFQKFPSSSVAFIDTGLRCAEPESLSGVLF 241
Query: 238 TNISLN---VIKVETAVAQ 253
++ L + +V TAVA+
Sbjct: 242 SDAELRRCQIPRVHTAVAR 260
>MGI|MGI:1926387 [details] [associations]
symbol:Cdon "cell adhesion molecule-related/down-regulated
by oncogenes" species:10090 "Mus musculus" [GO:0001708 "cell fate
specification" evidence=IGI] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=IDA] [GO:0002088 "lens
development in camera-type eye" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=ISO] [GO:0007224
"smoothened signaling pathway" evidence=IGI;ISO] [GO:0007520
"myoblast fusion" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0009986 "cell surface"
evidence=ISO;TAS] [GO:0010172 "embryonic body morphogenesis"
evidence=IGI;IMP] [GO:0014816 "satellite cell differentiation"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016202 "regulation of
striated muscle tissue development" evidence=ISO] [GO:0016337
"cell-cell adhesion" evidence=TAS] [GO:0021987 "cerebral cortex
development" evidence=IMP] [GO:0043410 "positive regulation of MAPK
cascade" evidence=IGI;IMP] [GO:0043497 "regulation of protein
heterodimerization activity" evidence=IDA] [GO:0045663 "positive
regulation of myoblast differentiation" evidence=TAS] [GO:0045664
"regulation of neuron differentiation" evidence=IMP] [GO:0045666
"positive regulation of neuron differentiation" evidence=IDA;IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0048598 "embryonic
morphogenesis" evidence=IGI] [GO:0048643 "positive regulation of
skeletal muscle tissue development" evidence=IMP] [GO:0051057
"positive regulation of small GTPase mediated signal transduction"
evidence=IMP] [GO:0051146 "striated muscle cell differentiation"
evidence=IGI] [GO:0060059 "embryonic retina morphogenesis in
camera-type eye" evidence=IMP] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IMP]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 MGI:MGI:1926387 GO:GO:0001708
GO:GO:0021987 GO:GO:0009986 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0009952 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0045944
GO:GO:0016337 GO:GO:0007520 GO:GO:0043410 GO:GO:0045666
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 GO:GO:0010172
GO:GO:0007224 GO:GO:2000179 GO:GO:0043497 MEROPS:I43.001
GO:GO:0051057 GO:GO:0045663 GeneTree:ENSGT00680000099752
GO:GO:0060059 GO:GO:0002088 CTD:50937 eggNOG:NOG150729
HOGENOM:HOG000060072 HOVERGEN:HBG081073 OMA:EGSKQWH
OrthoDB:EOG4GTKC2 GO:GO:0048643 GO:GO:0014816 EMBL:AF090866
EMBL:AC118232 EMBL:AC159894 EMBL:BC109176 IPI:IPI00136594
RefSeq:NP_067314.2 UniGene:Mm.80509 ProteinModelPortal:Q32MD9
SMR:Q32MD9 DIP:DIP-57227N STRING:Q32MD9 PhosphoSite:Q32MD9
PRIDE:Q32MD9 Ensembl:ENSMUST00000042842 Ensembl:ENSMUST00000119129
GeneID:57810 KEGG:mmu:57810 UCSC:uc009ote.2 InParanoid:Q32MD9
NextBio:313990 Bgee:Q32MD9 Genevestigator:Q32MD9 Uniprot:Q32MD9
Length = 1250
Score = 130 (50.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 40/129 (31%), Positives = 59/129 (45%)
Query: 136 KLNLE-DFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLA 194
+L +E D P I ++ + + VTLSC ATG PVP I W + +I + S +
Sbjct: 393 RLQIEQDSGWKPVIVTAPANIEVMDGDFVTLSCNATGVPVPVIHWYGRHGLITSHPSQVL 452
Query: 195 NMNKRQ--------------YIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNI 240
R+ Y+I + S+L+I AVT+ +G YTC A N G +
Sbjct: 453 RSKPRKSHLFRPGDLDLEPVYLIMSQAGSSSLSIQAVTLEHAGKYTCEATNKHGSTQSEA 512
Query: 241 SLNVIKVET 249
L V+ ET
Sbjct: 513 FLTVVPFET 521
Score = 47 (21.6 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 243 NVIKVETAVAQPDPVYLVASLTTVVTIILTACFVVLCI 280
NV + D +YL+ V +++ F+ LC+
Sbjct: 947 NVGPATSPARSSDMLYLIVGCVLGVMVLILMVFIALCL 984
>UNIPROTKB|I3LAE2 [details] [associations]
symbol:I3LAE2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070593 "dendrite self-avoidance" evidence=IEA]
[GO:0060060 "post-embryonic retina morphogenesis in camera-type
eye" evidence=IEA] [GO:0048842 "positive regulation of axon
extension involved in axon guidance" evidence=IEA] [GO:0048813
"dendrite morphogenesis" evidence=IEA] [GO:0042327 "positive
regulation of phosphorylation" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101869 EMBL:FP085419
Ensembl:ENSSSCT00000031867 Uniprot:I3LAE2
Length = 215
Score = 119 (46.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 34/123 (27%), Positives = 54/123 (43%)
Query: 128 HEAFINVPKLNLEDFAC------SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIF 181
++ F+ KL+ +D+ +P I + E V+L C G+P+P I W
Sbjct: 12 YQCFVRKDKLSAQDYVQVVLEDGTPKIISAFSEKVVSPAEPVSLMCNVKGTPLPTITWTL 71
Query: 182 KEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNIS 241
+ I + G ++ Q I N +S L I + + D G+Y C A N AG V
Sbjct: 72 DDDPI--LKGGSHRIS--QMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQAR 127
Query: 242 LNV 244
+NV
Sbjct: 128 INV 130
>UNIPROTKB|F1MM03 [details] [associations]
symbol:NCAM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030424 "axon" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR009138
Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
GO:GO:0030424 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00680000099931 OMA:EPTISWY EMBL:DAAA02000359
EMBL:DAAA02000360 EMBL:DAAA02000361 EMBL:DAAA02000362
EMBL:DAAA02000363 EMBL:DAAA02000364 EMBL:DAAA02000365
EMBL:DAAA02000366 IPI:IPI00716099 Ensembl:ENSBTAT00000034421
Uniprot:F1MM03
Length = 834
Score = 129 (50.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 42/124 (33%), Positives = 60/124 (48%)
Query: 136 KLNLEDFACSPNIRP-IT-P----DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANI 189
+++ D N+ P IT P + TAE E +T SCRA+GSP P I W K I
Sbjct: 192 EIDFRDIIVIVNVPPLITMPQKSFNATAERGEEMTFSCRASGSPEPTISWYRNGKFIEE- 250
Query: 190 SSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVET 249
N++ Y ++ N+ LT+ + SD G Y C+A N AGE + L V V+
Sbjct: 251 -------NEK-YSLRGSNT--ELTVRNIINSDGGPYVCKATNKAGEDEKQVLLQVF-VQP 299
Query: 250 AVAQ 253
+ Q
Sbjct: 300 HIIQ 303
>ZFIN|ZDB-GENE-010822-1 [details] [associations]
symbol:ncam2 "neural cell adhesion molecule 2"
species:7955 "Danio rerio" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR009138
Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 ZFIN:ZDB-GENE-010822-1 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00680000099931 EMBL:BX957273 EMBL:CR759897
EMBL:CR847542 EMBL:CU074387 IPI:IPI00633410
ProteinModelPortal:F1QDV1 Ensembl:ENSDART00000062137
ArrayExpress:F1QDV1 Bgee:F1QDV1 Uniprot:F1QDV1
Length = 840
Score = 129 (50.5 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 32/91 (35%), Positives = 46/91 (50%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLT 213
+ TA+ E+VT +CRA GSP P + W K G+ +Y+++ + LT
Sbjct: 221 NATADYGESVTFTCRAYGSPEPDVTWHRK---------GVQLQESERYVMRARGT--TLT 269
Query: 214 IVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
+ + D G YTCRA N AGEV + L V
Sbjct: 270 VRNIQQDDGGSYTCRASNKAGEVEHELFLKV 300
>FB|FBgn0033159 [details] [associations]
symbol:Dscam "Down syndrome cell adhesion molecule"
species:7227 "Drosophila melanogaster" [GO:0005887 "integral to
plasma membrane" evidence=ISM;ISS] [GO:0007411 "axon guidance"
evidence=IGI;IMP;TAS] [GO:0008046 "axon guidance receptor activity"
evidence=IMP;NAS] [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0016319 "mushroom body development"
evidence=IMP] [GO:0007413 "axonal fasciculation" evidence=IMP]
[GO:0006909 "phagocytosis" evidence=IMP] [GO:0051635 "bacterial
cell surface binding" evidence=IDA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0030424 "axon" evidence=IDA]
[GO:0070593 "dendrite self-avoidance" evidence=IMP;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0021551 "central nervous system morphogenesis" evidence=IMP]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 EMBL:AE013599
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007422
GO:GO:0006909 GO:GO:0016319 InterPro:IPR013098 Pfam:PF07679
GO:GO:0007413 GO:GO:0051635 GO:GO:0021551 GO:GO:0048846 CTD:1826
GO:GO:0070593 GeneTree:ENSGT00690000101869 GO:GO:0008046
UniGene:Dm.2832 GeneID:35652 KEGG:dme:Dmel_CG17800
FlyBase:FBgn0033159 GenomeRNAi:35652 NextBio:794432
InterPro:IPR021012 Pfam:PF12355 RefSeq:NP_001036503.1
ProteinModelPortal:Q0E9K8 SMR:Q0E9K8 STRING:Q0E9K8 PRIDE:Q0E9K8
EnsemblMetazoa:FBtr0111102 UCSC:CG17800-RAN Bgee:Q0E9K8
Uniprot:Q0E9K8
Length = 2037
Score = 133 (51.9 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 40/123 (32%), Positives = 57/123 (46%)
Query: 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT 205
P IR + T E +V L C A G+P P+I W K IAN QY+
Sbjct: 430 PVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANND----RYQVGQYVTVN 485
Query: 206 INSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLTT 265
+ +S L I +V +D G+Y C AK+ G + LNV + + Q + +VA T
Sbjct: 486 GDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPY-IRQMEKKAIVAGETL 544
Query: 266 VVT 268
+VT
Sbjct: 545 IVT 547
>UNIPROTKB|F1Q057 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0020037 "heme binding" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0004601 "peroxidase activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 SUPFAM:SSF48113
Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325 OMA:EPVITWN
EMBL:AAEX03010629 EMBL:AAEX03010630 EMBL:AAEX03010631
EMBL:AAEX03010632 EMBL:AAEX03010633 EMBL:AAEX03010634
PeroxiBase:10035 Ensembl:ENSCAFT00000005177 Uniprot:F1Q057
Length = 1408
Score = 98 (39.6 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 33/125 (26%), Positives = 54/125 (43%)
Query: 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK 204
+P I D+T + NV L C + G P P I W K+ + SG +++ +
Sbjct: 457 TPVFASIPSDMTVDVGSNVQLPCSSQGEPEPAITWN-KDGVQVT-ESGKFHISPEGF--- 511
Query: 205 TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLT 264
LTI V +D+G Y C A+N G+ ++ L+V V DP + +
Sbjct: 512 -------LTIHDVGTADAGRYECVARNTIGQASVSMVLSV-SVPDVSRNGDPFVATSIVE 563
Query: 265 TVVTI 269
+ T+
Sbjct: 564 AIATV 568
Score = 97 (39.2 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 30/107 (28%), Positives = 45/107 (42%)
Query: 133 NVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISS 191
+V + E+ C P I D V +CRA G+P P+I W+ ++ +
Sbjct: 165 SVATITPEELDCERPRITSEPQDADVTSGNTVFFTCRAEGNPKPEIIWLRNNNELSMKTD 224
Query: 192 GLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFT 238
N+ ++ L I +D GIY C AKN AG+V T
Sbjct: 225 SRLNL---------LDD-GTLMIQNTQETDQGIYQCMAKNVAGQVKT 261
Score = 82 (33.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 83 FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
FRKL NL L L+ NQI+ +P + + L+ L L N IQ I +AF + L
Sbjct: 15 FRKLRNLNTLLLNNNQIKSIPGGSFEDLENLKYLYLYKNEIQAIDRQAFKGLASL 69
Score = 73 (30.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 82 TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
+F L NL L L N+IQ + + L +L L N I+ + E+F ++PKL
Sbjct: 38 SFEDLENLKYLYLYKNEIQAIDRQAFKGLASLEQLYLHFNQIETLDPESFQHLPKL 93
>ZFIN|ZDB-GENE-041210-129 [details] [associations]
symbol:lrrc4.1 "leucine rich repeat containing 4.1"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041210-129 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
InterPro:IPR026882 PANTHER:PTHR24369:SF9 EMBL:BX855622
UniGene:Dr.114688 UniGene:Dr.159965 Ensembl:ENSDART00000140028
OMA:ILTHASW Uniprot:I7HJH4
Length = 858
Score = 107 (42.7 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 33/126 (26%), Positives = 58/126 (46%)
Query: 20 IMVLVCTGCLQVFAE-----CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLS 74
++ L+ C++V A CP+ C C + K V+C + T +P + T+ L+L
Sbjct: 24 VLFLMVQACVEVVAAAGPQGCPTDCSCNNQLSK--VVCTRRGLTRVPPGIPSTTRHLNLM 81
Query: 75 DNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAF 131
+N ++ +FR L +L L L N I+ + + L L+L N + + AF
Sbjct: 82 ENAIESVQVDSFRNLHHLEVLQLGRNAIRQIEVGAFSGLTNLNTLELFDNRLTVVPSGAF 141
Query: 132 INVPKL 137
+ KL
Sbjct: 142 EYLSKL 147
Score = 99 (39.9 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
+VL L N + + F L NL L+L N++ VPS + + +LREL L NPI+
Sbjct: 100 EVLQLGRNAIRQIEVGAFSGLTNLNTLELFDNRLTVVPSGAFEYLSKLRELWLRNNPIES 159
Query: 126 ITHEAFINVPKL 137
I AF VP L
Sbjct: 160 IPSYAFNRVPSL 171
Score = 70 (29.7 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 26/106 (24%), Positives = 38/106 (35%)
Query: 144 CS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYI 202
CS P I D+ L CR + ++W+ I +S +
Sbjct: 352 CSAPFIADAPRDLNISAERVAELKCRTAA--MSAVRWLLPNGTILTHASSHPRL------ 403
Query: 203 IKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVE 248
T+ + L V D+G+YTC N AG + LNV E
Sbjct: 404 --TVLNDGTLNFSNVLAGDTGMYTCMVSNAAGNSNASAYLNVSAAE 447
Score = 37 (18.1 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 10/52 (19%), Positives = 23/52 (44%)
Query: 237 FTNISLNVIKVETAVAQPDPVYLVASLTTVVTI---ILTACFVVLCIILLKA 285
FT +++ V+ + + +P A +T T + F+ +LL++
Sbjct: 456 FTTVTVEVLSPTSEMPKPKTTTTTAGASTTTTASPSVFQPVFISTPTVLLQS 507
>UNIPROTKB|E2QW21 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AAEX03010953 RefSeq:XP_540204.1 ProteinModelPortal:E2QW21
Ensembl:ENSCAFT00000012896 GeneID:483089 KEGG:cfa:483089
NextBio:20857544 Uniprot:E2QW21
Length = 522
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 45/169 (26%), Positives = 73/169 (43%)
Query: 22 VLVCT--GCLQVFAECPSTCE--CKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNF 77
V++C C Q+ PS C C+ +G + C+A N T P L G L L N
Sbjct: 20 VVLCLLGACFQMLPAAPSGCPQLCRCEG--RLLYCEALNLTEAPHNLS-GLLGLSLRYNS 76
Query: 78 LDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINV 134
L F L+ L L L +N I V + ++EL LS N I ++ + F +
Sbjct: 77 LSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPM 136
Query: 135 PKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKE 183
P L D + + ++ + PD+ + TL R+ ++ IF++
Sbjct: 137 PNLRSVDLSYN-KLQALAPDLFHGLRKLTTLHMRSNAIQFVPVR-IFQD 183
>MGI|MGI:1321398 [details] [associations]
symbol:F11r "F11 receptor" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005923 "tight junction" evidence=IMP]
[GO:0007155 "cell adhesion" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IDA] InterPro:IPR007110 PROSITE:PS50835
MGI:MGI:1321398 GO:GO:0016021 GO:GO:0005886 GO:GO:0019048
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 GO:GO:0005923 InterPro:IPR013098
Pfam:PF07679 GO:GO:0030855 InterPro:IPR003596 SMART:SM00406
GeneTree:ENSGT00670000097525 CTD:50848 eggNOG:NOG150281
HOGENOM:HOG000247041 HOVERGEN:HBG000518 KO:K06089 OMA:SSPRVEW
OrthoDB:EOG4VT5XV ChiTaRS:F11R EMBL:U89915 EMBL:AK033574
EMBL:CT010347 EMBL:AC087229 EMBL:BC021876 IPI:IPI00121362
IPI:IPI00316159 RefSeq:NP_766235.1 UniGene:Mm.294882 PDB:1F97
PDBsum:1F97 ProteinModelPortal:O88792 MINT:MINT-247376
STRING:O88792 PhosphoSite:O88792 PaxDb:O88792 PRIDE:O88792
Ensembl:ENSMUST00000043839 GeneID:16456 KEGG:mmu:16456
InParanoid:O88792 EvolutionaryTrace:O88792 NextBio:289731
CleanEx:MM_F11R Genevestigator:O88792 GermOnline:ENSMUSG00000038235
Uniprot:O88792
Length = 300
Score = 122 (48.0 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKR---QYIIKTINSLS 210
DV ENE++ L+C +G P+++W K + ++ L N + Y + S S
Sbjct: 36 DVQVPENESIKLTCTYSGFSSPRVEW----KFVQGSTTALVCYNSQITAPYADRVTFSSS 91
Query: 211 NLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPD-PVYLVASLTTVVTI 269
+T +VT D+G YTC G+ + +S+++ T + P P V S T+
Sbjct: 92 GITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHL----TVLVPPSKPTISVPSSVTIGNR 147
Query: 270 ILTAC 274
+ C
Sbjct: 148 AVLTC 152
>UNIPROTKB|Q5VST9 [details] [associations]
symbol:OBSCN "Obscurin" species:9606 "Homo sapiens"
[GO:0004713 "protein tyrosine kinase activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
pathway" evidence=TAS] [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0030016 "myofibril" evidence=NAS]
[GO:0031432 "titin binding" evidence=IPI] [GO:0030018 "Z disc"
evidence=ISS] [GO:0031430 "M band" evidence=ISS] [GO:0008307
"structural constituent of muscle" evidence=NAS] [GO:0030506
"ankyrin binding" evidence=IPI] [GO:0045214 "sarcomere
organization" evidence=TAS] [GO:0034613 "cellular protein
localization" evidence=ISS] InterPro:IPR000219 InterPro:IPR000048
InterPro:IPR000719 InterPro:IPR001452 InterPro:IPR001849
InterPro:IPR002290 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR008266 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00041 Pfam:PF00069 Pfam:PF00612
Pfam:PF00621 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS00109
PROSITE:PS00741 PROSITE:PS50002 PROSITE:PS50003 PROSITE:PS50010
PROSITE:PS50011 PROSITE:PS50096 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00015 SMART:SM00060 SMART:SM00220 SMART:SM00233
SMART:SM00326 GO:GO:0007275 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_111102 GO:GO:0006915 GO:GO:0048011 GO:GO:0007264
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0031430 GO:GO:0030018
GO:GO:0034613 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF49265 SUPFAM:SSF56112
GO:GO:0004674 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0051056 SUPFAM:SSF50044 GO:GO:0004713
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 GO:GO:0045214
GO:GO:0008307 GO:GO:0035023 InterPro:IPR013098 Pfam:PF07679
EMBL:AL359510 InterPro:IPR020675 PANTHER:PTHR22964 EMBL:AJ002535
EMBL:AJ314896 EMBL:AJ314898 EMBL:AJ314900 EMBL:AJ314901
EMBL:AJ314903 EMBL:AJ314904 EMBL:AJ314905 EMBL:AJ314906
EMBL:AJ314907 EMBL:AJ314908 EMBL:AL670729 EMBL:AL353593
EMBL:AM231061 EMBL:AB046776 EMBL:AB046859 IPI:IPI00288940
IPI:IPI00479915 IPI:IPI00742748 IPI:IPI00744119 IPI:IPI00854629
RefSeq:NP_001092093.2 RefSeq:NP_443075.3 UniGene:Hs.650039
UniGene:Hs.656999 PDB:1V1C PDB:2CR6 PDB:2DKU PDB:2DM7 PDB:2E7B
PDB:2EDF PDB:2EDH PDB:2EDL PDB:2EDQ PDB:2EDR PDB:2EDT PDB:2EDW
PDB:2ENY PDB:2EO1 PDB:2GQH PDB:2YZ8 PDBsum:1V1C PDBsum:2CR6
PDBsum:2DKU PDBsum:2DM7 PDBsum:2E7B PDBsum:2EDF PDBsum:2EDH
PDBsum:2EDL PDBsum:2EDQ PDBsum:2EDR PDBsum:2EDT PDBsum:2EDW
PDBsum:2ENY PDBsum:2EO1 PDBsum:2GQH PDBsum:2YZ8
ProteinModelPortal:Q5VST9 DIP:DIP-35727N IntAct:Q5VST9
MINT:MINT-254901 STRING:Q5VST9 PhosphoSite:Q5VST9 DMDM:215274225
PaxDb:Q5VST9 PRIDE:Q5VST9 Ensembl:ENST00000284548
Ensembl:ENST00000422127 GeneID:84033 KEGG:hsa:84033 UCSC:uc001hsn.3
UCSC:uc009xez.1 CTD:84033 GeneCards:GC01P228395 H-InvDB:HIX0001664
H-InvDB:HIX0159663 H-InvDB:HIX0159975 H-InvDB:HIX0160154
HGNC:HGNC:15719 HPA:HPA019497 HPA:HPA021186 MIM:608616
neXtProt:NX_Q5VST9 PharmGKB:PA31888 HOVERGEN:HBG108206
InParanoid:Q5VST9 OMA:CEVGQEK EvolutionaryTrace:Q5VST9
GenomeRNAi:84033 NextBio:73174 ArrayExpress:Q5VST9 Bgee:Q5VST9
Genevestigator:Q5VST9 GermOnline:ENSG00000154358 InterPro:IPR020682
PANTHER:PTHR22964:SF11 Uniprot:Q5VST9
Length = 7968
Score = 138 (53.6 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 161 ENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMS 220
++ TLSC+ G+P P++ W EK +++G ++ + L LTI+ + +
Sbjct: 25 KDATLSCQIVGNPTPQVSW---EKDQQPVAAGA------RFRLAQDGDLYRLTILDLALG 75
Query: 221 DSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLV 260
DSG Y CRA+N GE F + L V E A A+ P +L+
Sbjct: 76 DSGQYVCRARNAIGEAFAAVGLQV-DAEAACAEQAPHFLL 114
>MGI|MGI:97385 [details] [associations]
symbol:Ntrk3 "neurotrophic tyrosine kinase, receptor, type 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000187 "activation of MAPK activity"
evidence=ISO] [GO:0001764 "neuron migration" evidence=ISO]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=ISO] [GO:0002039 "p53 binding" evidence=ISO] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004714 "transmembrane
receptor protein tyrosine kinase activity" evidence=IEA]
[GO:0005030 "neurotrophin receptor activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0007169 "transmembrane receptor
protein tyrosine kinase signaling pathway" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030335
"positive regulation of cell migration" evidence=ISO] [GO:0032148
"activation of protein kinase B activity" evidence=ISO] [GO:0032856
"activation of Ras GTPase activity" evidence=ISO] [GO:0033138
"positive regulation of peptidyl-serine phosphorylation"
evidence=ISO] [GO:0042490 "mechanoreceptor differentiation"
evidence=IMP] [GO:0046777 "protein autophosphorylation"
evidence=ISO] [GO:0046875 "ephrin receptor binding" evidence=ISO]
[GO:0048665 "neuron fate specification" evidence=ISO] [GO:0048691
"positive regulation of axon extension involved in regeneration"
evidence=IGI] [GO:0048712 "negative regulation of astrocyte
differentiation" evidence=ISO] [GO:0050927 "positive regulation of
positive chemotaxis" evidence=ISO] [GO:0060548 "negative regulation
of cell death" evidence=ISO] [GO:2000251 "positive regulation of
actin cytoskeleton reorganization" evidence=ISO] InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR002011
InterPro:IPR007110 InterPro:IPR008266 InterPro:IPR011009
InterPro:IPR017441 InterPro:IPR020446 InterPro:IPR020635
InterPro:IPR020777 Pfam:PF07714 PRINTS:PR00109 PRINTS:PR01939
PRINTS:PR01942 PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS00239
PROSITE:PS50011 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00219
MGI:MGI:97385 GO:GO:0005524 GO:GO:0005737 GO:GO:0001764
GO:GO:0000139 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0051412 GO:GO:0045471 eggNOG:COG0515 GO:GO:0004714
SUPFAM:SSF56112 GO:GO:0071300 InterPro:IPR003599 SMART:SM00409
InterPro:IPR000483 SMART:SM00082 GO:GO:0048678 GO:GO:0046777
GO:GO:0007169 GO:GO:0060548 GeneTree:ENSGT00700000104172
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0048665 GO:GO:0090102 GO:GO:0042490
GO:GO:0048712 GO:GO:0019056 HOVERGEN:HBG056735 HOGENOM:HOG000264255
CTD:4916 KO:K05101 GO:GO:0005030 OMA:NFVSIYE GO:GO:0048691
EMBL:AY336094 EMBL:AF035399 EMBL:AF035400 EMBL:BC139764
IPI:IPI00131278 IPI:IPI00380220 IPI:IPI00807839 RefSeq:NP_032772.3
RefSeq:NP_877961.1 UniGene:Mm.33496 UniGene:Mm.421361 HSSP:Q16288
ProteinModelPortal:Q6VNS1 SMR:Q6VNS1 STRING:Q6VNS1
PhosphoSite:Q6VNS1 PaxDb:Q6VNS1 PRIDE:Q6VNS1
Ensembl:ENSMUST00000039431 Ensembl:ENSMUST00000039438 GeneID:18213
KEGG:mmu:18213 UCSC:uc009hxf.2 UCSC:uc009hxh.2 UCSC:uc009hxi.2
InParanoid:Q6VNS1 OrthoDB:EOG4W3SM8 ChEMBL:CHEMBL2791
NextBio:293614 Bgee:Q6VNS1 CleanEx:MM_NTRK3 Genevestigator:Q6VNS1
GermOnline:ENSMUSG00000059146 Uniprot:Q6VNS1
Length = 825
Score = 128 (50.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 49/192 (25%), Positives = 85/192 (44%)
Query: 71 LDLSDNFLDRYTFR--KLINLVELDLSYNQIQF-VPSHILDSILELRELKLSGNPIQKIT 127
++LS N L +++ + ++L EL L N + E E +L + I+
Sbjct: 132 INLSSNRLTTLSWQLFQTLSLRELRLEQNFFNCSCDIRWMQLWQEQGEARLDSQSLYCIS 191
Query: 128 HEAFINVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKII 186
+ +P + C P I ++T E +N ++C +GSP+P + WI
Sbjct: 192 ADGS-QLPLFRMNISQCDLPEISVSHVNLTVREGDNAVITCNGSGSPLPDVDWIV----- 245
Query: 187 ANISSGLANMNKRQYIIKTINSLS-NLTIVAVTMSDSGI-YTCRAKNGAGEVFTNISLNV 244
+GL ++N Q + N + NLT+V VT D+G TC A+N G +++L V
Sbjct: 246 ----TGLQSINTHQTNLNWTNVHAINLTLVNVTSEDNGFTLTCIAENVVGMSNASVALTV 301
Query: 245 IKVETAVAQPDP 256
V+ +P
Sbjct: 302 YYPPRVVSLVEP 313
>UNIPROTKB|F1NR94 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR001791 Pfam:PF00054 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 EMBL:AADN02015249 EMBL:AADN02015250 EMBL:AADN02015251
EMBL:AADN02015252 EMBL:AADN02015253 EMBL:AADN02015254
EMBL:AADN02015255 EMBL:AADN02015256 EMBL:AADN02015257
EMBL:AADN02015258 EMBL:AADN02015259 EMBL:AADN02015260
EMBL:AADN02015261 EMBL:AADN02015262 EMBL:AADN02015263
EMBL:AADN02015264 EMBL:AADN02015265 EMBL:AADN02015266
EMBL:AADN02015267 EMBL:AADN02015268 EMBL:AADN02015269
EMBL:AADN02015270 EMBL:AADN02015271 IPI:IPI00594561
Ensembl:ENSGALT00000037314 ArrayExpress:F1NR94 Uniprot:F1NR94
Length = 666
Score = 123 (48.4 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 44/167 (26%), Positives = 72/167 (43%)
Query: 25 CTGCLQVFAECPST-CECKWKGGKETVL---CKAKNFTTIPEQLD--VGTQVLDLSDN-- 76
CT CL C + + KG + V FT +P++L ++DLS+N
Sbjct: 72 CT-CLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRI 130
Query: 77 -FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVP 135
L +F + L+ L LSYN+++ +P+ D + LR L L GN I + AF ++
Sbjct: 131 STLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLS 190
Query: 136 KLN-----LEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKI 177
L+ C N++ ++ V +E E C G K+
Sbjct: 191 ALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKL 237
Score = 47 (21.6 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 196 MNKRQYI-IKT--INSLSNLTIVAVTMSDSGI 224
+NK Y+ I + I+S +N+T+ T DSGI
Sbjct: 506 VNKESYLQIPSAKIHSQTNITLQIATDEDSGI 537
>UNIPROTKB|H3BPX2 [details] [associations]
symbol:OBSCN "Obscurin" species:9606 "Homo sapiens"
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035023
"regulation of Rho protein signal transduction" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000219
InterPro:IPR000048 InterPro:IPR000719 InterPro:IPR001452
InterPro:IPR001849 InterPro:IPR002290 InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR008266 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00041 Pfam:PF00069
Pfam:PF00612 Pfam:PF00621 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS00109 PROSITE:PS50003 PROSITE:PS50010 PROSITE:PS50011
PROSITE:PS50096 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00015
SMART:SM00060 SMART:SM00220 SMART:SM00233 SMART:SM00326
GO:GO:0005524 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 SUPFAM:SSF49265
SUPFAM:SSF56112 GO:GO:0004674 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0005622 SUPFAM:SSF50044
GO:GO:0004713 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
GO:GO:0035023 InterPro:IPR013098 Pfam:PF07679 EMBL:AL359510
InterPro:IPR020675 PANTHER:PTHR22964 EMBL:AL670729 EMBL:AL353593
HGNC:HGNC:15719 InterPro:IPR020682 PANTHER:PTHR22964:SF11
ProteinModelPortal:H3BPX2 SMR:H3BPX2 Ensembl:ENST00000570156
Bgee:H3BPX2 Uniprot:H3BPX2
Length = 8678
Score = 138 (53.6 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 161 ENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMS 220
++ TLSC+ G+P P++ W EK +++G ++ + L LTI+ + +
Sbjct: 25 KDATLSCQIVGNPTPQVSW---EKDQQPVAAGA------RFRLAQDGDLYRLTILDLALG 75
Query: 221 DSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLV 260
DSG Y CRA+N GE F + L V E A A+ P +L+
Sbjct: 76 DSGQYVCRARNAIGEAFAAVGLQV-DAEAACAEQAPHFLL 114
>RGD|3214 [details] [associations]
symbol:Ntrk3 "neurotrophic tyrosine kinase, receptor, type 3"
species:10116 "Rattus norvegicus" [GO:0000139 "Golgi membrane"
evidence=TAS] [GO:0000187 "activation of MAPK activity" evidence=ISO]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0002039 "p53
binding" evidence=ISO] [GO:0004714 "transmembrane receptor protein
tyrosine kinase activity" evidence=IEA] [GO:0005030 "neurotrophin
receptor activity" evidence=ISO;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=IDA;TAS] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEP] [GO:0007169 "transmembrane receptor protein tyrosine
kinase signaling pathway" evidence=IEA;ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0010628 "positive
regulation of gene expression" evidence=ISO] [GO:0016020 "membrane"
evidence=IDA] [GO:0019056 "modulation by virus of host transcription"
evidence=IEP] [GO:0030335 "positive regulation of cell migration"
evidence=ISO] [GO:0032148 "activation of protein kinase B activity"
evidence=ISO] [GO:0032856 "activation of Ras GTPase activity"
evidence=ISO] [GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=ISO] [GO:0042490 "mechanoreceptor
differentiation" evidence=IEA;ISO] [GO:0045471 "response to ethanol"
evidence=IEP] [GO:0046777 "protein autophosphorylation" evidence=IMP]
[GO:0046875 "ephrin receptor binding" evidence=IPI] [GO:0048665
"neuron fate specification" evidence=IMP] [GO:0048678 "response to
axon injury" evidence=IEP] [GO:0048691 "positive regulation of axon
extension involved in regeneration" evidence=IEA;ISO] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IMP]
[GO:0050927 "positive regulation of positive chemotaxis"
evidence=ISO] [GO:0051412 "response to corticosterone stimulus"
evidence=IEP] [GO:0060548 "negative regulation of cell death"
evidence=IMP] [GO:0071300 "cellular response to retinoic acid"
evidence=IEP] [GO:0090102 "cochlea development" evidence=IEP]
[GO:2000251 "positive regulation of actin cytoskeleton
reorganization" evidence=ISO] InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR002011 InterPro:IPR007110
InterPro:IPR008266 InterPro:IPR011009 InterPro:IPR017441
InterPro:IPR020446 InterPro:IPR020635 InterPro:IPR020777 Pfam:PF07714
PRINTS:PR00109 PRINTS:PR01939 PRINTS:PR01942 PROSITE:PS00107
PROSITE:PS00109 PROSITE:PS00239 PROSITE:PS50011 PROSITE:PS50835
PROSITE:PS51450 SMART:SM00219 RGD:3214 GO:GO:0005886 GO:GO:0005524
Reactome:REACT_111984 GO:GO:0001764 GO:GO:0000139 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0051412 GO:GO:0045471
eggNOG:COG0515 BRENDA:2.7.10.1 GO:GO:0004714 SUPFAM:SSF56112
GO:GO:0071300 InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
SMART:SM00082 GO:GO:0048678 GO:GO:0046777 GO:GO:0007169 GO:GO:0060548
GeneTree:ENSGT00700000104172 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0048665
GO:GO:0090102 GO:GO:0042490 GO:GO:0048712 MEROPS:I43.001
GO:GO:0019056 HOVERGEN:HBG056735 HOGENOM:HOG000264255 CTD:4916
KO:K05101 GO:GO:0005030 OMA:NFVSIYE GO:GO:0048691 OrthoDB:EOG4W3SM8
EMBL:L03813 EMBL:L14445 EMBL:L14446 EMBL:L14447 EMBL:S60953
EMBL:S62924 EMBL:S62933 IPI:IPI00194553 IPI:IPI00210007
IPI:IPI00231029 IPI:IPI00231030 IPI:IPI00231031 IPI:IPI00231032
IPI:IPI00231034 IPI:IPI00231035 RefSeq:NP_001257584.1
RefSeq:NP_001257585.1 RefSeq:NP_062121.1 UniGene:Rn.9963
ProteinModelPortal:Q03351 SMR:Q03351 DIP:DIP-5718N MINT:MINT-1208236
STRING:Q03351 PhosphoSite:Q03351 PRIDE:Q03351
Ensembl:ENSRNOT00000025536 Ensembl:ENSRNOT00000041839
Ensembl:ENSRNOT00000045165 Ensembl:ENSRNOT00000046080
Ensembl:ENSRNOT00000046849 Ensembl:ENSRNOT00000047776
Ensembl:ENSRNOT00000050151 GeneID:29613 KEGG:rno:29613 UCSC:RGD:3214
InParanoid:Q03351 NextBio:609800 ArrayExpress:Q03351
Genevestigator:Q03351 GermOnline:ENSRNOG00000018674 Uniprot:Q03351
Length = 864
Score = 128 (50.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 49/192 (25%), Positives = 85/192 (44%)
Query: 71 LDLSDNFLDRYTFR--KLINLVELDLSYNQIQF-VPSHILDSILELRELKLSGNPIQKIT 127
++LS N L +++ + ++L EL L N + E E +L + I+
Sbjct: 132 INLSSNRLTTLSWQLFQTLSLRELRLEQNFFNCSCDIRWMQLWQEQGEARLDSQSLYCIS 191
Query: 128 HEAFINVPKLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKII 186
+ +P + C P I ++T E +N ++C +GSP+P + WI
Sbjct: 192 ADGS-QLPLFRMNISQCDLPEISVSHVNLTVREGDNAVITCNGSGSPLPDVDWIV----- 245
Query: 187 ANISSGLANMNKRQYIIKTINSLS-NLTIVAVTMSDSGI-YTCRAKNGAGEVFTNISLNV 244
+GL ++N Q + N + NLT+V VT D+G TC A+N G +++L V
Sbjct: 246 ----TGLQSINTHQTNLNWTNVHAINLTLVNVTSEDNGFTLTCIAENVVGMSNASVALTV 301
Query: 245 IKVETAVAQPDP 256
V+ +P
Sbjct: 302 YYPPRVVSLVEP 313
>MGI|MGI:1923481 [details] [associations]
symbol:Igsf10 "immunoglobulin superfamily, member 10"
species:10090 "Mus musculus" [GO:0001503 "ossification"
evidence=ISA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005021 "vascular endothelial growth factor-activated receptor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0042246 "tissue regeneration"
evidence=ISO] [GO:0048010 "vascular endothelial growth factor
receptor signaling pathway" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR009134 PRINTS:PR01832
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:1923481 GO:GO:0005524
GO:GO:0005576 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042246
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0001503 MEROPS:I43.001 GO:GO:0048010 GO:GO:0005021
GO:GO:0038084 GeneTree:ENSGT00700000104014 CTD:285313
eggNOG:NOG239806 HOVERGEN:HBG107995 OMA:PYVSEDG OrthoDB:EOG45MN4F
EMBL:AC122038 EMBL:AK143421 EMBL:AC135238 EMBL:AK132367
EMBL:AK081990 IPI:IPI00405810 RefSeq:NP_001156356.1
UniGene:Mm.228086 UniGene:Mm.444186 HSSP:P07359
ProteinModelPortal:Q3V1M1 SMR:Q3V1M1 PhosphoSite:Q3V1M1
PRIDE:Q3V1M1 Ensembl:ENSMUST00000039419 GeneID:242050
KEGG:mmu:242050 UCSC:uc008piu.2 InParanoid:Q3V1M1 NextBio:385215
Bgee:Q3V1M1 CleanEx:MM_IGSF10 Genevestigator:Q3V1M1 Uniprot:Q3V1M1
Length = 2594
Score = 101 (40.6 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 37/138 (26%), Positives = 58/138 (42%)
Query: 117 KLSGNPIQKITHEAFINVPKLNLEDFACSPNI-RPITPDVTAEENENVTLSCRATGSPVP 175
K + NP K H + ++PK L+ P I T N +V L C A G P P
Sbjct: 1596 KPAQNPTSK--HLPYDSLPKTILK----KPRIIGGKAASFTVPTNSDVLLPCEAVGDPKP 1649
Query: 176 KIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE 235
I W + IS G+ R +++ L+I V++ D G Y C A N G
Sbjct: 1650 TIHWT-RVSSGREISRGI--QKTRFHVLPN----GTLSIQRVSIQDRGQYLCAASNPLGV 1702
Query: 236 VFTNISLNVIKVETAVAQ 253
+++L+V+ + +
Sbjct: 1703 DHLHVTLSVVSYPARILE 1720
Score = 100 (40.3 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 165 LSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIV--AVTMSDS 222
+ C+A+GSPVP++ W + + N +A + Y K N T+ V M++
Sbjct: 2029 VDCKASGSPVPEVSWSLPDGTVVN---NVAQADDSGYRTKRYTLFHNGTLYFNKVGMAEE 2085
Query: 223 GIYTCRAKNGAGEVFTNISLNVIKVETAVAQ 253
G Y C A+N G+ + L V+ + Q
Sbjct: 2086 GDYICSAQNTLGKDEMKVHLTVLTAIPRIRQ 2116
Score = 97 (39.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIF-KEKIIANISSGLANMNKRQYIIKTINSLSNL 212
++TA V L CR G P P I WI + +++ G +++ ++ L
Sbjct: 1725 EITAHSGSTVKLKCRVEGMPRPTISWILANQTVVSETPEG----SRKVWVTPD----GTL 1776
Query: 213 TIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLTTVVTIILT 272
I +++ D G Y C A N +G+ + + VI + + +V L + + T
Sbjct: 1777 IIHNLSLYDRGFYKCVANNPSGQDSLLVKIQVITAPPVIIEQKRQAIVGVLGESLKLPCT 1836
Query: 273 A 273
A
Sbjct: 1837 A 1837
Score = 96 (38.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 35/118 (29%), Positives = 53/118 (44%)
Query: 137 LNLEDFACSPNIRPITPDVTAEEN--ENVTLSCRATGSPVPKIKWIFKEKIIANISSGLA 194
L +E+ P I + T E N E + L+C ATG P P I W K++ +
Sbjct: 1903 LRVEEQETVPRIETASQKWT-EVNLGEKLLLNCSATGDPKPTIIWKLPSKVVID---QWH 1958
Query: 195 NMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE--VFTNISLNVI--KVE 248
M R ++ +L I +VT D G Y C A+N G+ V ++ L + K+E
Sbjct: 1959 RMGSRIHVYPN----GSLVIGSVTEKDGGDYLCVARNKMGDDLVLMHVRLRLTPAKIE 2012
Score = 93 (37.8 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 30/111 (27%), Positives = 47/111 (42%)
Query: 136 KLNLEDFACSPNIRP-ITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLA 194
K++L P IR +V + + L C TG P P + W+ + + S
Sbjct: 2102 KVHLTVLTAIPRIRQNYRSNVRIKAGDTAVLDCEVTGEPKPNVFWLLPSNNVISFS---- 2157
Query: 195 NMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVI 245
N R +I +LS I V DSG Y C A+N +G+ L+++
Sbjct: 2158 --NDR-FIFHANGTLS---INKVKPLDSGKYVCVAQNPSGDDTKTYKLDIV 2202
Score = 83 (34.3 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 30/106 (28%), Positives = 43/106 (40%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYT---FRKLINLVE 91
CP C C V C + T+IP+ + + ++L N L R T F L L
Sbjct: 29 CPRRCACYVP---TEVHCTFRYLTSIPDGIPANVERVNLGYNSLTRLTENDFSGLSRLEL 85
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L L N I V + L+ LK+S N +Q I + + L
Sbjct: 86 LMLHSNGIHRVSDKTFSGLQSLQVLKMSYNKVQIIEKDTLYGLRSL 131
Score = 81 (33.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 69 QVLDLSDNFLDRY---TFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++L L N + R TF L +L L +SYN++Q + L + L L L N I+
Sbjct: 84 ELLMLHSNGIHRVSDKTFSGLQSLQVLKMSYNKVQIIEKDTLYGLRSLTRLHLDHNNIEF 143
Query: 126 ITHEAFINVPKLNL 139
I EAF + L L
Sbjct: 144 INPEAFYGLTLLRL 157
Score = 79 (32.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 69 QVLDLSDN---FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
QVL +S N +++ T L +L L L +N I+F+ + LR + L GN + K
Sbjct: 108 QVLKMSYNKVQIIEKDTLYGLRSLTRLHLDHNNIEFINPEAFYGLTLLRLVHLEGNRLTK 167
Query: 126 ITHEAFINVPKLNL 139
+ + F+++ L +
Sbjct: 168 LHPDTFVSLSYLQI 181
>UNIPROTKB|E2RKA1 [details] [associations]
symbol:NTRK2 "Tyrosine-protein kinase receptor"
species:9615 "Canis lupus familiaris" [GO:2000811 "negative
regulation of anoikis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060175 "brain-derived
neurotrophic factor-activated receptor activity" evidence=IEA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IEA] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0048403 "brain-derived
neurotrophic factor binding" evidence=IEA] [GO:0046548 "retinal rod
cell development" evidence=IEA] [GO:0043195 "terminal bouton"
evidence=IEA] [GO:0042490 "mechanoreceptor differentiation"
evidence=IEA] [GO:0035584 "calcium-mediated signaling using
intracellular calcium source" evidence=IEA] [GO:0032314 "regulation
of Rac GTPase activity" evidence=IEA] [GO:0021987 "cerebral cortex
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0014047 "glutamate secretion"
evidence=IEA] [GO:0010976 "positive regulation of neuron projection
development" evidence=IEA] [GO:0010628 "positive regulation of gene
expression" evidence=IEA] [GO:0007631 "feeding behavior"
evidence=IEA] [GO:0007612 "learning" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR002011 InterPro:IPR007110 InterPro:IPR008266
InterPro:IPR011009 InterPro:IPR017441 InterPro:IPR020455
InterPro:IPR020635 InterPro:IPR020777 Pfam:PF07714 PRINTS:PR00109
PRINTS:PR01939 PRINTS:PR01941 PROSITE:PS00107 PROSITE:PS00109
PROSITE:PS00239 PROSITE:PS50011 PROSITE:PS50835 SMART:SM00219
GO:GO:0005829 GO:GO:0005524 GO:GO:0021987 GO:GO:0001764
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0010976
GO:GO:0007631 GO:GO:0007612 GO:GO:0060291 SUPFAM:SSF56112
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483 SMART:SM00082
GO:GO:0043195 GO:GO:0010628 GO:GO:0001570 GO:GO:0032314
GeneTree:ENSGT00700000104172 GO:GO:0046548 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0014047 GO:GO:0048709 GO:GO:0021954 GO:GO:0042490
GO:GO:2000811 GO:GO:0035584 GO:GO:0048935 GO:GO:0051896 CTD:4915
KO:K04360 GO:GO:0060175 OMA:YGKDERQ EMBL:AAEX03000513
RefSeq:XP_003432766.1 Ensembl:ENSCAFT00000002138 GeneID:484147
KEGG:cfa:484147 Uniprot:E2RKA1
Length = 822
Score = 134 (52.2 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 55/171 (32%), Positives = 83/171 (48%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI--THEAFINVP 135
L R FR L +L EL L N F S + I L+E K S Q + +E+ N+P
Sbjct: 130 LSRKHFRHL-DLSELILVGNP--FTCSCDIMWIKTLQETK-SSPETQDLYCLNESSKNIP 185
Query: 136 KLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLA 194
NL+ C P+ P++T EE +++TLSC G PVP + W + N+ S
Sbjct: 186 LANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVAGDPVPNLYWD-----VGNLVS--K 238
Query: 195 NMNKRQYIIKTINSLSNLTIVAVTMSDSGIY-TCRAKNGAGEVFTNISLNV 244
+MN+ T + +L I ++ DSG +C A+N GE +++L V
Sbjct: 239 HMNE------TSHMQGSLRITNISSDDSGKQISCVAENLVGEDQDSVNLTV 283
Score = 37 (18.1 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 4/7 (57%), Positives = 7/7 (100%)
Query: 35 CPSTCEC 41
CP++C+C
Sbjct: 32 CPTSCKC 38
>ZFIN|ZDB-GENE-080807-4 [details] [associations]
symbol:hspg2 "heparan sulfate proteoglycan 2"
species:7955 "Danio rerio" [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 ZFIN:ZDB-GENE-080807-4
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 GeneTree:ENSGT00530000063501
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0007519 Pfam:PF12661 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
EMBL:CR936463 EMBL:CR855310 IPI:IPI00889358
Ensembl:ENSDART00000111029 Bgee:F1RCP6 Uniprot:F1RCP6
Length = 3422
Score = 134 (52.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 40/120 (33%), Positives = 56/120 (46%)
Query: 140 EDFACSPNIRPITPD--VTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMN 197
++F C+P ++P+ +TA + VT +C A G PVP I W ++ G N
Sbjct: 313 DEFGCAPPTVTVSPEESITASRGDTVTFTCSAIGVPVPIITW--------RLNWGHIPAN 364
Query: 198 KRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPV 257
R +I N LTI V D G YTC A N G VF I V+ + +P+PV
Sbjct: 365 NRITMISE-NGQGTLTIRDVKEGDQGAYTCEAINAKGLVFA-IPDGVLSLSQ---KPNPV 419
>ZFIN|ZDB-GENE-091214-3 [details] [associations]
symbol:lingo4b "leucine rich repeat and Ig domain
containing 4b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091214-3 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 HOVERGEN:HBG057546 EMBL:BC171652 IPI:IPI00612243
UniGene:Dr.74856 ProteinModelPortal:B7ZVN7 eggNOG:NOG299566
OMA:IVESEYA OrthoDB:EOG4NZTT6 Uniprot:B7ZVN7
Length = 604
Score = 126 (49.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 36/127 (28%), Positives = 55/127 (43%)
Query: 20 IMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLD 79
+++L C CP C C + E V C +++ T +PE L + LDLS N L
Sbjct: 14 VLLLWCLNLSAADLPCPQRCSCS-RDPLE-VNCSSRHLTAVPEGLPTNAKRLDLSGNQLK 71
Query: 80 ---RYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPK 136
R F L L +LDLS N I + + LR L++ N ++ + F +
Sbjct: 72 TLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFSGLSN 131
Query: 137 LNLEDFA 143
L D +
Sbjct: 132 LRRLDIS 138
>ZFIN|ZDB-GENE-041014-322 [details] [associations]
symbol:hmcn1 "hemicentin 1" species:7955 "Danio
rerio" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0033333
"fin development" evidence=IMP] [GO:0071711 "basement membrane
organization" evidence=IMP] [GO:0033334 "fin morphogenesis"
evidence=IMP] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002035 InterPro:IPR007110 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50835
SMART:SM00179 SMART:SM00181 SMART:SM00327 InterPro:IPR000152
ZFIN:ZDB-GENE-041014-322 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR013098 Pfam:PF07679
GO:GO:0071711 InterPro:IPR000884 Pfam:PF00090 SMART:SM00209
SUPFAM:SSF82895 PROSITE:PS50092 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR026823 Pfam:PF12662 Gene3D:2.40.155.10
InterPro:IPR023413 InterPro:IPR009017 SUPFAM:SSF54511
InterPro:IPR006605 Pfam:PF07474 PROSITE:PS50993
GeneTree:ENSGT00700000104014 EMBL:BX957305 GO:GO:0033334
EMBL:BX248238 IPI:IPI01023513 Ensembl:ENSDART00000144705
Bgee:F1R7R3 Uniprot:F1R7R3
Length = 5616
Score = 136 (52.9 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 44/124 (35%), Positives = 59/124 (47%)
Query: 146 PNI--RPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYII 203
PNI + +++ N++V L CRA G+P P+I+W+ G+ Q I
Sbjct: 3231 PNIIGSELPSEMSVLLNDSVQLVCRAEGTPTPEIQWL---------KDGMTISRTAQKNI 3281
Query: 204 KTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASL 263
K S LT+ AV SDSG YTC A N AGE +LNV V + P L
Sbjct: 3282 KISPDGSTLTVTAVHTSDSGKYTCVATNQAGEEDRIFNLNVY-VPPLIQGNGPA--AKEL 3338
Query: 264 TTVV 267
TTV+
Sbjct: 3339 TTVL 3342
Score = 130 (50.8 bits), Expect = 0.00035, P = 0.00035
Identities = 38/149 (25%), Positives = 72/149 (48%)
Query: 119 SGNPIQKITHEAFINVPKLNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIK 178
+G + T++A +++L+ + P+I ++T N TLSC ATG P P +
Sbjct: 3764 TGRYLCMATNQAGTERKRVDLQVYV-PPSIAEGPTNITVTVNVQTTLSCEATGIPKPSVS 3822
Query: 179 WIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFT 238
W + + N ++ Q + + ++S +L ++A ++ D+ +Y C N AG+
Sbjct: 3823 WTKNTQAL--------NTDQNQNMYRLLSS-GSLVVIAPSVEDTALYECVVSNEAGQESR 3873
Query: 239 NISLNVIKVETAVAQPDPVYLVASLTTVV 267
I L V V ++A +V+ L+ VV
Sbjct: 3874 AIQLTV-HVPPSIADEATELVVSRLSPVV 3901
>UNIPROTKB|E2RLJ0 [details] [associations]
symbol:OBSCN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR000048
InterPro:IPR001452 InterPro:IPR001849 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 Pfam:PF00612 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 PROSITE:PS50096 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00015 SMART:SM00060 SMART:SM00233
SMART:SM00326 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0005622 SUPFAM:SSF50044 GO:GO:0005089 Gene3D:1.20.900.10
SUPFAM:SSF48065 GO:GO:0035023 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00700000104431 EMBL:AAEX03009171 EMBL:AAEX03009172
EMBL:AAEX03009173 EMBL:AAEX03009174 EMBL:AAEX03009175
Ensembl:ENSCAFT00000001792 Uniprot:E2RLJ0
Length = 5738
Score = 136 (52.9 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 33/100 (33%), Positives = 51/100 (51%)
Query: 161 ENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMS 220
++ TLSC+ G+P P++ W EK + G ++ + L LTI+ + +
Sbjct: 24 KDATLSCQIVGNPTPQVSW---EKDQLPVEEGA------RFRLAQDGDLYRLTILDLALG 74
Query: 221 DSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLV 260
DSG Y CRA+N GE F + L V E A A+ P +L+
Sbjct: 75 DSGQYVCRARNAIGEAFAAVGLQV-DAEAACAEQAPHFLL 113
>ZFIN|ZDB-GENE-080327-16 [details] [associations]
symbol:lingo1a "leucine rich repeat and Ig domain
containing 1a" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-080327-16 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0031103
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
EMBL:BX005076 EMBL:CR759783 IPI:IPI01024439
Ensembl:ENSDART00000149965 Bgee:F8W4D7 Uniprot:F8W4D7
Length = 619
Score = 126 (49.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 36/132 (27%), Positives = 64/132 (48%)
Query: 16 WRVYIMVLVCTGCLQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSD 75
W+ +++++ T CPS CEC + + +VLC K ++PE + T++LDLS
Sbjct: 20 WQPILILMLGTVLSGSATGCPSRCECNVQ--ERSVLCHRKKLMSVPEGIPSETRLLDLSK 77
Query: 76 NFLDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFI 132
N + F L EL+L+ N I + +++ L+ L L N ++ I F
Sbjct: 78 NRIKTINPDEFSAFPQLEELELNENTISAIEPGAFNNLYGLQTLGLRSNKLKLIQLGVFT 137
Query: 133 ---NVPKLNLED 141
N+ KL++ +
Sbjct: 138 GLSNLTKLDISE 149
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 130 (50.8 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 37/114 (32%), Positives = 55/114 (48%)
Query: 33 AECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINL 89
A CP+ C C TV C + T +P+ + T LDL DN + + F L+NL
Sbjct: 15 ATCPAECVCV----DRTVSCVGQQLTEVPQNIPNDTIRLDLQDNEITKIGPNDFSSLMNL 70
Query: 90 VELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFA 143
L L NQI + + S++ L++L+LS N I+ + F N KL D +
Sbjct: 71 KALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQNNLKLTHLDLS 124
>UNIPROTKB|D6RAV7 [details] [associations]
symbol:TLR6 "Toll-like receptor 6" species:9606 "Homo
sapiens" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0006954 "inflammatory
response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0034150 "toll-like receptor 6 signaling pathway"
evidence=IEA] [GO:0042088 "T-helper 1 type immune response"
evidence=IEA] [GO:0042496 "detection of diacyl bacterial
lipopeptide" evidence=IEA] [GO:0045410 "positive regulation of
interleukin-6 biosynthetic process" evidence=IEA] [GO:0050707
"regulation of cytokine secretion" evidence=IEA] [GO:0035355
"Toll-like receptor 2-Toll-like receptor 6 protein complex"
evidence=IEA] [GO:0042498 "diacyl lipopeptide binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR001611 InterPro:IPR027187 PROSITE:PS51450
EMBL:AC108044 GO:GO:0035355 GO:GO:0042498 PANTHER:PTHR24365:SF130
HGNC:HGNC:16711 ChiTaRS:TLR6 IPI:IPI00718965
ProteinModelPortal:D6RAV7 SMR:D6RAV7 Ensembl:ENST00000508254
ArrayExpress:D6RAV7 Bgee:D6RAV7 Uniprot:D6RAV7
Length = 150
Score = 107 (42.7 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 33/111 (29%), Positives = 55/111 (49%)
Query: 42 KWKGGKETVLCKAKN-FTTIPEQLDVGTQVLDLSDNFLDRYTFRKLINLVELD---LSYN 97
++ G E + K+K +P+ L + T+VLD+S N++ + L EL LS+N
Sbjct: 27 QFSDGNEFAVDKSKRGLIHVPKDLPLKTKVLDMSQNYIAELQVSDMSFLSELTVLRLSHN 86
Query: 98 QIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLE--DFACSP 146
+IQ + + +L L LS N +QKI+ ++ L+L DF P
Sbjct: 87 RIQLLDLSVFKFNQDLEYLDLSHNQLQKISCHPIVSFRHLDLSFNDFKALP 137
>RGD|3213 [details] [associations]
symbol:Ntrk2 "neurotrophic tyrosine kinase, receptor, type 2"
species:10116 "Rattus norvegicus" [GO:0000139 "Golgi membrane"
evidence=TAS] [GO:0001570 "vasculogenesis" evidence=IEA;ISO]
[GO:0001764 "neuron migration" evidence=ISO;ISS] [GO:0004714
"transmembrane receptor protein tyrosine kinase activity"
evidence=IMP] [GO:0005030 "neurotrophin receptor activity"
evidence=IDA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=ISO;IDA;TAS] [GO:0005887 "integral to
plasma membrane" evidence=ISO;IDA] [GO:0006468 "protein
phosphorylation" evidence=ISO] [GO:0007528 "neuromuscular junction
development" evidence=ISO] [GO:0007568 "aging" evidence=IEP]
[GO:0007612 "learning" evidence=ISO;ISS] [GO:0007616 "long-term
memory" evidence=IDA] [GO:0007631 "feeding behavior"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=ISO;ISS] [GO:0010976
"positive regulation of neuron projection development"
evidence=ISO;ISS] [GO:0010996 "response to auditory stimulus"
evidence=IEP] [GO:0014047 "glutamate secretion" evidence=IEA;ISO]
[GO:0014068 "positive regulation of phosphatidylinositol 3-kinase
cascade" evidence=IMP] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0019222 "regulation of metabolic process"
evidence=ISO] [GO:0021954 "central nervous system neuron development"
evidence=ISO;ISS] [GO:0021987 "cerebral cortex development"
evidence=ISO;ISS] [GO:0030182 "neuron differentiation"
evidence=ISO;ISS] [GO:0030424 "axon" evidence=IDA] [GO:0030425
"dendrite" evidence=IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0031547 "brain-derived neurotrophic factor receptor signaling
pathway" evidence=ISO;IMP;IDA] [GO:0032314 "regulation of Rac GTPase
activity" evidence=ISO;ISS] [GO:0035584 "calcium-mediated signaling
using intracellular calcium source" evidence=IEA;ISO] [GO:0042490
"mechanoreceptor differentiation" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043121 "neurotrophin binding"
evidence=ISO;ISS;IDA] [GO:0043195 "terminal bouton" evidence=IEA;ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043408 "regulation
of MAPK cascade" evidence=IDA] [GO:0043410 "positive regulation of
MAPK cascade" evidence=IMP] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IMP] [GO:0043679 "axon terminus"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=ISO]
[GO:0046548 "retinal rod cell development" evidence=IEA;ISO]
[GO:0046777 "protein autophosphorylation" evidence=IMP;IDA]
[GO:0046875 "ephrin receptor binding" evidence=IPI] [GO:0046928
"regulation of neurotransmitter secretion" evidence=IDA] [GO:0048403
"brain-derived neurotrophic factor binding" evidence=ISO;IMP;IDA]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEA;ISO]
[GO:0048786 "presynaptic active zone" evidence=IDA] [GO:0048935
"peripheral nervous system neuron development" evidence=IEA;ISO]
[GO:0050772 "positive regulation of axonogenesis" evidence=IMP]
[GO:0050773 "regulation of dendrite development" evidence=IMP]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IEA;ISO] [GO:0051968 "positive regulation of synaptic
transmission, glutamatergic" evidence=IMP] [GO:0060076 "excitatory
synapse" evidence=IDA] [GO:0060175 "brain-derived neurotrophic
factor-activated receptor activity" evidence=ISO;IDA] [GO:0060291
"long-term synaptic potentiation" evidence=IEA;ISO] [GO:2000811
"negative regulation of anoikis" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR002011 InterPro:IPR007110
InterPro:IPR008266 InterPro:IPR011009 InterPro:IPR017441
InterPro:IPR020455 InterPro:IPR020635 InterPro:IPR020777 Pfam:PF07714
PRINTS:PR00109 PRINTS:PR01939 PRINTS:PR01941 PROSITE:PS00107
PROSITE:PS00109 PROSITE:PS00239 PROSITE:PS50011 PROSITE:PS50835
SMART:SM00219 RGD:3213 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_111984 GO:GO:0021987 GO:GO:0001764 GO:GO:0042803
GO:GO:0014069 GO:GO:0009986 GO:GO:0000139 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0010976 eggNOG:COG0515
GO:GO:0008284 GO:GO:0007568 GO:GO:0007631 GO:GO:0043025 GO:GO:0007612
GO:GO:0060291 GO:GO:0043679 GO:GO:0046928 BRENDA:2.7.10.1
SUPFAM:SSF56112 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
SMART:SM00082 GO:GO:0007616 GO:GO:0048786 GO:GO:0043195 GO:GO:0043524
GO:GO:0051968 GO:GO:0014068 GO:GO:0046777 GO:GO:0010008 GO:GO:0030426
GO:GO:0050772 GO:GO:0043410 GO:GO:0010628 GO:GO:0001570 GO:GO:0032314
GO:GO:0050773 GeneTree:ENSGT00700000104172 GO:GO:0046548
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0014047 GO:GO:0048709 GO:GO:0060076 GO:GO:0021954
GO:GO:0042490 GO:GO:2000811 GO:GO:0035584 GO:GO:0048935 GO:GO:0051896
GO:GO:0010996 HOVERGEN:HBG056735 HOGENOM:HOG000264255 CTD:4915
KO:K04360 OrthoDB:EOG4255S6 GO:GO:0048403 GO:GO:0060175 OMA:YGKDERQ
EMBL:M55291 EMBL:M55292 EMBL:M55293 IPI:IPI00210944 IPI:IPI00231143
IPI:IPI00231144 PIR:A39667 PIR:B39667 PIR:C39667
RefSeq:NP_001156640.1 RefSeq:NP_036863.1 UniGene:Rn.11246
ProteinModelPortal:Q63604 SMR:Q63604 DIP:DIP-5717N MINT:MINT-1204365
STRING:Q63604 PhosphoSite:Q63604 PRIDE:Q63604
Ensembl:ENSRNOT00000042145 Ensembl:ENSRNOT00000066498 GeneID:25054
KEGG:rno:25054 UCSC:RGD:3213 InParanoid:Q63604 ChEMBL:CHEMBL1795111
NextBio:605258 ArrayExpress:Q63604 Genevestigator:Q63604
GermOnline:ENSRNOG00000018839 Uniprot:Q63604
Length = 821
Score = 129 (50.5 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 53/171 (30%), Positives = 86/171 (50%)
Query: 78 LDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKI--THEAFINVP 135
L R FR L +L +L L+ N F S + + L+E K S + Q + +E+ N P
Sbjct: 130 LSRRHFRHL-DLSDLILTGNP--FTCSCDIMWLKTLQETKSSPDT-QDLYCLNESSKNTP 185
Query: 136 KLNLEDFACS-PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLA 194
NL+ C P+ R P++T EE ++VT+SC G P+P + W + N+ S
Sbjct: 186 LANLQIPNCGLPSARLAAPNLTVEEGKSVTISCSVGGDPLPTLYWD-----VGNLVS--K 238
Query: 195 NMNKRQYIIKTINSLSNLTIVAVTMSDSGIY-TCRAKNGAGEVFTNISLNV 244
+MN+ T ++ +L I ++ DSG +C A+N GE +++L V
Sbjct: 239 HMNE------TSHTQGSLRITNISSDDSGKQISCVAENLVGEDQDSVNLTV 283
Score = 42 (19.8 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 17 RVYIMVLVCTGCLQVFAECPSTCEC 41
R++ + L+ G + CP +C+C
Sbjct: 14 RLWGLCLLVLGFWRASLACPMSCKC 38
>UNIPROTKB|F1P2E2 [details] [associations]
symbol:NTRK2 "Tyrosine-protein kinase receptor"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0007612 "learning" evidence=IEA] [GO:0007631
"feeding behavior" evidence=IEA] [GO:0010628 "positive regulation
of gene expression" evidence=IEA] [GO:0010976 "positive regulation
of neuron projection development" evidence=IEA] [GO:0014047
"glutamate secretion" evidence=IEA] [GO:0021954 "central nervous
system neuron development" evidence=IEA] [GO:0021987 "cerebral
cortex development" evidence=IEA] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IEA] [GO:0035584 "calcium-mediated
signaling using intracellular calcium source" evidence=IEA]
[GO:0042490 "mechanoreceptor differentiation" evidence=IEA]
[GO:0043195 "terminal bouton" evidence=IEA] [GO:0046548 "retinal
rod cell development" evidence=IEA] [GO:0048403 "brain-derived
neurotrophic factor binding" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0048935
"peripheral nervous system neuron development" evidence=IEA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IEA] [GO:0060175 "brain-derived neurotrophic
factor-activated receptor activity" evidence=IEA] [GO:0060291
"long-term synaptic potentiation" evidence=IEA] [GO:2000811
"negative regulation of anoikis" evidence=IEA] InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR002011
InterPro:IPR007110 InterPro:IPR008266 InterPro:IPR011009
InterPro:IPR017441 InterPro:IPR020455 InterPro:IPR020635
InterPro:IPR020777 Pfam:PF07714 PRINTS:PR00109 PRINTS:PR01939
PRINTS:PR01941 PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS00239
PROSITE:PS50011 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00219
GO:GO:0005829 GO:GO:0005524 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0060291 SUPFAM:SSF56112 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 SMART:SM00082 GO:GO:0043195
GO:GO:0010628 GO:GO:0032314 GeneTree:ENSGT00700000104172
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0014047 GO:GO:2000811 GO:GO:0035584 GO:GO:0051896
IPI:IPI00598961 GO:GO:0060175 OMA:YGKDERQ EMBL:AADN02064868
EMBL:AADN02064869 EMBL:AADN02064870 EMBL:AADN02064871
EMBL:AADN02064872 EMBL:AADN02064873 EMBL:AADN02064874
EMBL:AADN02064875 EMBL:AADN02064876 EMBL:AADN02064877
EMBL:AADN02064878 EMBL:AADN02064879 EMBL:AADN02064880
EMBL:AADN02064881 EMBL:AADN02064882 EMBL:AADN02064883
EMBL:AADN02064884 EMBL:AADN02064885 EMBL:AADN02064886
EMBL:AADN02064887 EMBL:AADN02064888 EMBL:AADN02064889
EMBL:AADN02064890 Ensembl:ENSGALT00000020568 ArrayExpress:F1P2E2
Uniprot:F1P2E2
Length = 818
Score = 110 (43.8 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLT 213
++T E +++TL C TG P P + W+ +++N S T + ++LT
Sbjct: 204 NITVVEGKSITLYCDTTGGPPPNVSWVLTN-LVSNHESD------------TSKNPASLT 250
Query: 214 IVAVTMSDSGIY-TCRAKNGAGEVFTNISLNVIKVE--TAVAQPDP 256
I V+ DSG++ +C A+N GEV T+ L V T + P P
Sbjct: 251 IKNVSSMDSGLWISCVAENIVGEVQTSAELTVFFAPNITFIESPTP 296
Score = 62 (26.9 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 31/144 (21%), Positives = 62/144 (43%)
Query: 16 WRVYIMVLVCTGCLQVFAECPSTCECK-WKGGKETVLCKAKNFTTIPEQL---DVGTQVL 71
W + +VL GC + CP++C C W+ + +F +P++ D T++
Sbjct: 16 WGLCCLVL---GCWRGALGCPASCRCSSWRIWCSEPVPGITSFP-VPQRSTEDDNVTEIY 71
Query: 72 DLSDNFLDRYTFRKL---INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITH 128
+ L+ ++ + L L + + ++FV + L+ + LS N + ++
Sbjct: 72 IANQRKLESINDNEVGFYVGLKNLTVVDSGLRFVSRQAFVKNINLQYINLSRNKLSSLSK 131
Query: 129 EAF--INVPKLNLED--FACSPNI 148
+ F + + L L D F CS I
Sbjct: 132 KPFRHLGLSDLILVDNPFKCSCEI 155
>UNIPROTKB|Q91987 [details] [associations]
symbol:NTRK2 "BDNF/NT-3 growth factors receptor"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007631 "feeding behavior" evidence=IEA]
[GO:0014047 "glutamate secretion" evidence=IEA] [GO:0035584
"calcium-mediated signaling using intracellular calcium source"
evidence=IEA] [GO:0042490 "mechanoreceptor differentiation"
evidence=IEA] [GO:0043195 "terminal bouton" evidence=IEA]
[GO:0046548 "retinal rod cell development" evidence=IEA]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEA]
[GO:0048935 "peripheral nervous system neuron development"
evidence=IEA] [GO:0051896 "regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0060291 "long-term synaptic
potentiation" evidence=IEA] [GO:2000811 "negative regulation of
anoikis" evidence=IEA] [GO:0043121 "neurotrophin binding"
evidence=ISS] [GO:0060175 "brain-derived neurotrophic
factor-activated receptor activity" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0014068
"positive regulation of phosphatidylinositol 3-kinase cascade"
evidence=ISS] [GO:0043410 "positive regulation of MAPK cascade"
evidence=ISS] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=ISS] [GO:0046777 "protein autophosphorylation"
evidence=ISS] [GO:0050772 "positive regulation of axonogenesis"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0031547 "brain-derived neurotrophic factor
receptor signaling pathway" evidence=ISS] [GO:0048403
"brain-derived neurotrophic factor binding" evidence=ISS]
[GO:0001764 "neuron migration" evidence=ISS] [GO:0007612 "learning"
evidence=ISS] [GO:0010628 "positive regulation of gene expression"
evidence=ISS] [GO:0010976 "positive regulation of neuron projection
development" evidence=ISS] [GO:0021954 "central nervous system
neuron development" evidence=ISS] [GO:0021987 "cerebral cortex
development" evidence=ISS] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0032314 "regulation of Rac GTPase activity"
evidence=ISS] InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR002011 InterPro:IPR007110
InterPro:IPR008266 InterPro:IPR011009 InterPro:IPR017441
InterPro:IPR020455 InterPro:IPR020635 InterPro:IPR020777
Pfam:PF07714 PRINTS:PR00109 PRINTS:PR01939 PRINTS:PR01941
PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS00239 PROSITE:PS50011
PROSITE:PS50835 PROSITE:PS51450 SMART:SM00219 GO:GO:0005829
GO:GO:0005524 GO:GO:0021987 GO:GO:0001764 GO:GO:0042803
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0010976
eggNOG:COG0515 GO:GO:0008284 GO:GO:0007612 GO:GO:0060291
BRENDA:2.7.10.1 SUPFAM:SSF56112 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 GO:GO:0043195 GO:GO:0043524
GO:GO:0014068 GO:GO:0046777 GO:GO:0010008 GO:GO:0050772
GO:GO:0043410 GO:GO:0010628 GO:GO:0032314 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0014047
GO:GO:0021954 GO:GO:2000811 GO:GO:0035584 MEROPS:I43.001
GO:GO:0051896 HOVERGEN:HBG056735 HOGENOM:HOG000264255 EMBL:X77251
EMBL:X77252 EMBL:X74109 IPI:IPI00571923 IPI:IPI00572101
IPI:IPI00582743 IPI:IPI00587228 IPI:IPI00591711 IPI:IPI00592289
IPI:IPI00594007 IPI:IPI00594373 IPI:IPI00596757 IPI:IPI00598848
IPI:IPI00598961 IPI:IPI00603138 PIR:S59938 PIR:S59939
RefSeq:NP_990562.1 UniGene:Gga.681 ProteinModelPortal:Q91987
SMR:Q91987 STRING:Q91987 GeneID:396157 KEGG:gga:396157 CTD:4915
InParanoid:Q91987 KO:K04360 OrthoDB:EOG4255S6 NextBio:20816213
GO:GO:0048403 GO:GO:0060175 Uniprot:Q91987
Length = 818
Score = 110 (43.8 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLT 213
++T E +++TL C TG P P + W+ +++N S T + ++LT
Sbjct: 204 NITVVEGKSITLYCDTTGGPPPNVSWVLTN-LVSNHESD------------TSKNPASLT 250
Query: 214 IVAVTMSDSGIY-TCRAKNGAGEVFTNISLNVIKVE--TAVAQPDP 256
I V+ DSG++ +C A+N GEV T+ L V T + P P
Sbjct: 251 IKNVSSMDSGLWISCVAENIVGEVQTSAELTVFFAPNITFIESPTP 296
Score = 62 (26.9 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 31/144 (21%), Positives = 62/144 (43%)
Query: 16 WRVYIMVLVCTGCLQVFAECPSTCECK-WKGGKETVLCKAKNFTTIPEQL---DVGTQVL 71
W + +VL GC + CP++C C W+ + +F +P++ D T++
Sbjct: 16 WGLCCLVL---GCWRGALGCPASCRCSSWRIWCSEPVPGITSFP-VPQRSTEDDNVTEIY 71
Query: 72 DLSDNFLDRYTFRKL---INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITH 128
+ L+ ++ + L L + + ++FV + L+ + LS N + ++
Sbjct: 72 IANQRKLESINDNEVGFYVGLKNLTVVDSGLRFVSRQAFVKNINLQYINLSRNKLSSLSK 131
Query: 129 EAF--INVPKLNLED--FACSPNI 148
+ F + + L L D F CS I
Sbjct: 132 KPFRHLGLSDLILVDNPFKCSCEI 155
>UNIPROTKB|H3BM69 [details] [associations]
symbol:ISLR2 "Immunoglobulin superfamily-containing
leucine-rich repeat protein 2" species:9606 "Homo sapiens"
[GO:0009986 "cell surface" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0009986 GO:GO:0045773 InterPro:IPR000372
SMART:SM00013 HGNC:HGNC:29286 EMBL:AC010931 Ensembl:ENST00000565332
Bgee:H3BM69 Uniprot:H3BM69
Length = 114
Score = 101 (40.6 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 29/96 (30%), Positives = 41/96 (42%)
Query: 29 LQVFAECPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDN---FLDRYTFRK 85
L V CP C C K + C K +PE L L LS N L R F
Sbjct: 14 LGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSANKITVLRRGAFAD 73
Query: 86 LINLVELDLSYNQIQFVPSHILDSILELRELKLSGN 121
+ + L L++N+++ V L + +L+ L LS N
Sbjct: 74 VTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHN 109
>UNIPROTKB|J3QQJ6 [details] [associations]
symbol:DCC "Netrin receptor DCC" species:9606 "Homo
sapiens" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001975
"response to amphetamine" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0005042 "netrin receptor
activity" evidence=IEA] [GO:0010976 "positive regulation of neuron
projection development" evidence=IEA] [GO:0021965 "spinal cord
ventral commissure morphogenesis" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0032584 "growth cone membrane" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0070374 "positive regulation of
ERK1 and ERK2 cascade" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
EMBL:AC011155 EMBL:AC019239 EMBL:AC021486 EMBL:AC027248
EMBL:AC078999 EMBL:AC090660 EMBL:AC100777 EMBL:AC103949
EMBL:AC110591 EMBL:AC116002 HGNC:HGNC:2701 Ensembl:ENST00000578949
Uniprot:J3QQJ6
Length = 102
Score = 101 (40.6 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 36/117 (30%), Positives = 53/117 (45%)
Query: 162 NVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSD 221
++ C +G PVP + W+ ++ I S Y I SNL I+ V SD
Sbjct: 2 DIEFECTVSGKPVPTVNWMKNGDVV--IPS--------DYF--QIVGGSNLRILGVVKSD 49
Query: 222 SGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLVASLTTVVTIILTACFVVL 278
G Y C A+N AG T+ L V K A P L ++ VV +++++ FV L
Sbjct: 50 EGFYQCVAENEAGNAQTSAQLIVPKP----AIPSSSVLPSAPRDVVPVLVSSRFVRL 102
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 129 (50.5 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 37/123 (30%), Positives = 59/123 (47%)
Query: 25 CTGCLQVFAECPST-CECKWKGGKETVL---CKAKNFTTIPEQLDV--GTQVLDLSDN-- 76
CT CL+ C + KG + V + + T +P +L ++DLS+N
Sbjct: 526 CT-CLETVVRCSNRGLHTLPKGIPKDVTELYLEGNHLTAVPRELSALRHLTLIDLSNNSI 584
Query: 77 -FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVP 135
L YTF + +L L LSYN+++ +P H D + LR L L GN I + +F ++
Sbjct: 585 GVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFDGLRSLRVLTLHGNDISSVPEGSFSDLT 644
Query: 136 KLN 138
L+
Sbjct: 645 SLS 647
>UNIPROTKB|F1SM72 [details] [associations]
symbol:LOC100515564 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050850 "positive regulation of calcium-mediated
signaling" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA] [GO:0001928 "regulation of exocyst assembly"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009897 GO:GO:0030424 GO:GO:0043025 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0050850 GO:GO:0030426
GO:GO:0007166 GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679
GO:GO:0034109 GeneTree:ENSGT00680000099931 GO:GO:0001928
OMA:DVTCYFL EMBL:CU570935 Ensembl:ENSSSCT00000016411 Uniprot:F1SM72
Length = 1116
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 146 PNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKT 205
P I + E E VTL+C A+G P+P I W + NISS ++ ++++
Sbjct: 307 PKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTR---NISSEEKTLDGHM-VVRS 362
Query: 206 INSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
+S+LT+ ++ +D+G Y C A N G+ ++ L V
Sbjct: 363 HARVSSLTLKSIQYTDAGEYVCTASNTIGQDSQSMYLEV 401
>FB|FBgn0243486 [details] [associations]
symbol:rdo "reduced ocelli" species:7227 "Drosophila
melanogaster" [GO:0008056 "ocellus development" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104286
GO:GO:0008056 EMBL:BT004502 RefSeq:NP_609861.1 UniGene:Dm.21796
SMR:Q9VJA9 MINT:MINT-990018 STRING:Q9VJA9
EnsemblMetazoa:FBtr0081029 GeneID:35077 KEGG:dme:Dmel_CG15151
UCSC:CG15151-RA CTD:35077 FlyBase:FBgn0243486 InParanoid:Q9VJA9
OMA:FRGQDNL OrthoDB:EOG4CZ8WX GenomeRNAi:35077 NextBio:791738
Uniprot:Q9VJA9
Length = 741
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 34/103 (33%), Positives = 54/103 (52%)
Query: 69 QVLDLSDNFLDRYT---FRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQK 125
++LDLS N + T FR NL+ELDLS N++ + S + +LR L L+ N I +
Sbjct: 109 RILDLSKNNITNITENNFRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVE 168
Query: 126 ITHEAFINVPKLNLEDFACSPNIRPITPDVTAEENENVTLSCR 168
+ F + +L D + +P ++ + PDV + E L CR
Sbjct: 169 LVQRNFFMLSRLKYLDLSGNP-LQDLQPDVFRDVPELKVLKCR 210
>UNIPROTKB|Q9P2V4 [details] [associations]
symbol:LRIT1 "Leucine-rich repeat, immunoglobulin-like
domain and transmembrane domain-containing protein 1" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030176 "integral
to endoplasmic reticulum membrane" evidence=ISS] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030176 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 EMBL:AB031547 EMBL:AL080175 IPI:IPI00024059
PIR:T12497 RefSeq:NP_056428.1 UniGene:Hs.226000
ProteinModelPortal:Q9P2V4 SMR:Q9P2V4 PhosphoSite:Q9P2V4
DMDM:37081671 PaxDb:Q9P2V4 PRIDE:Q9P2V4 DNASU:26103
Ensembl:ENST00000372105 GeneID:26103 KEGG:hsa:26103 UCSC:uc001kcz.1
CTD:26103 GeneCards:GC10M085982 HGNC:HGNC:23404 HPA:HPA014296
neXtProt:NX_Q9P2V4 PharmGKB:PA162394331 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 InParanoid:Q9P2V4
OMA:RRINEYF OrthoDB:EOG42JNR2 PhylomeDB:Q9P2V4 GenomeRNAi:26103
NextBio:48099 Bgee:Q9P2V4 CleanEx:HS_LRIT1 Genevestigator:Q9P2V4
GermOnline:ENSG00000148602 Uniprot:Q9P2V4
Length = 623
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 44/138 (31%), Positives = 58/138 (42%)
Query: 35 CPSTCECKWK----GGK-ETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKL 86
CPS C C G K TV+C + T P + T L L + R FR L
Sbjct: 23 CPSQCSCSLHIMGDGSKARTVVCNDPDMTLPPASIPPDTSRLRLERTAIRRVPGEAFRPL 82
Query: 87 INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSP 146
L +L L YN + + + +L + LREL+L GN + A + PKL L D
Sbjct: 83 GRLEQLWLPYNALSELNALMLRGLRRLRELRLPGNRLAAFPWAALRDAPKLRLLDLQA-- 140
Query: 147 NIRPITPDVTAEENENVT 164
N P A EN+T
Sbjct: 141 NRLSAVPAEAARFLENLT 158
>UNIPROTKB|F1M8G9 [details] [associations]
symbol:Ncam2 "Protein Ncam2" species:10116 "Rattus
norvegicus" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR009138
Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 RGD:1303131 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016020 GO:GO:0030424 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00680000099931 IPI:IPI00409508 PRIDE:F1M8G9
Ensembl:ENSRNOT00000002895 ArrayExpress:F1M8G9 Uniprot:F1M8G9
Length = 836
Score = 132 (51.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 36/106 (33%), Positives = 54/106 (50%)
Query: 136 KLNLEDFACSPNIRP--ITP----DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANI 189
+++ D N+ P + P + TAE E +TL+C+A+GSP P I W K+I
Sbjct: 194 EIDFRDIIVIVNVPPAIVMPQKSFNATAERGEEMTLTCKASGSPDPAISWFRNGKLIEE- 252
Query: 190 SSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE 235
N++ YI+K N+ LT+ + D G Y C+A N AGE
Sbjct: 253 -------NEK-YILKGSNT--ELTVRNIINKDGGSYVCKATNKAGE 288
Score = 38 (18.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 14/65 (21%), Positives = 28/65 (43%)
Query: 236 VFTNISLNVIKVETAVAQPDPVYLVASLTTVVTIILTACFVVLCIILLKAKRKRYADVNR 295
+F + L I + VA + L+ +T V + C +++CI +K +
Sbjct: 694 LFNGLGLGAI-IGLGVAA---LLLILVVTDVSCFFIRQCGLLMCITRRMCGKKSGSSGKS 749
Query: 296 RYLED 300
+ LE+
Sbjct: 750 KELEE 754
>RGD|1303131 [details] [associations]
symbol:Ncam2 "neural cell adhesion molecule 2" species:10116
"Rattus norvegicus" [GO:0007413 "axonal fasciculation"
evidence=IEP] [GO:0007608 "sensory perception of smell"
evidence=IEP] [GO:0030424 "axon" evidence=ISO] InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 RGD:1303131
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0007155 GO:GO:0007608
InterPro:IPR013098 Pfam:PF07679 GO:GO:0007413 KO:K06491
HOGENOM:HOG000074124 HOVERGEN:HBG052579 CTD:4685 OrthoDB:EOG4MGS6S
IPI:IPI00409545 EMBL:AY495695 RefSeq:NP_981954.1 UniGene:Rn.138756
ProteinModelPortal:Q6RKB3 SMR:Q6RKB3 STRING:Q6RKB3 GeneID:288280
KEGG:rno:288280 UCSC:RGD:1303131 InParanoid:Q6RKB3 NextBio:627894
Genevestigator:Q6RKB3 Uniprot:Q6RKB3
Length = 837
Score = 132 (51.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 36/106 (33%), Positives = 54/106 (50%)
Query: 136 KLNLEDFACSPNIRP--ITP----DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANI 189
+++ D N+ P + P + TAE E +TL+C+A+GSP P I W K+I
Sbjct: 195 EIDFRDIIVIVNVPPAIVMPQKSFNATAERGEEMTLTCKASGSPDPAISWFRNGKLIEE- 253
Query: 190 SSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE 235
N++ YI+K N+ LT+ + D G Y C+A N AGE
Sbjct: 254 -------NEK-YILKGSNT--ELTVRNIINKDGGSYVCKATNKAGE 289
Score = 38 (18.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 14/65 (21%), Positives = 28/65 (43%)
Query: 236 VFTNISLNVIKVETAVAQPDPVYLVASLTTVVTIILTACFVVLCIILLKAKRKRYADVNR 295
+F + L I + VA + L+ +T V + C +++CI +K +
Sbjct: 695 LFNGLGLGAI-IGLGVAA---LLLILVVTDVSCFFIRQCGLLMCITRRMCGKKSGSSGKS 750
Query: 296 RYLED 300
+ LE+
Sbjct: 751 KELEE 755
>UNIPROTKB|Q9BXB1 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IEA] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IEA]
[GO:0072224 "metanephric glomerulus development" evidence=IEA]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0045892 GO:GO:0045893 EMBL:CH471064 GO:GO:0004930
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282
EMBL:AF346711 EMBL:AF346709 EMBL:AF346710 EMBL:AF257182
EMBL:AC090597 IPI:IPI00217954 RefSeq:NP_060960.2 UniGene:Hs.502176
ProteinModelPortal:Q9BXB1 SMR:Q9BXB1 DIP:DIP-59894N STRING:Q9BXB1
PhosphoSite:Q9BXB1 DMDM:212286375 PaxDb:Q9BXB1 PRIDE:Q9BXB1
DNASU:55366 Ensembl:ENST00000379214 GeneID:55366 KEGG:hsa:55366
UCSC:uc001mrj.4 CTD:55366 GeneCards:GC11M027345 H-InvDB:HIX0009517
HGNC:HGNC:13299 HPA:HPA030267 MIM:606666 neXtProt:NX_Q9BXB1
PharmGKB:PA28893 HOVERGEN:HBG031675 InParanoid:Q9BXB1 KO:K04309
OMA:DGYWSDC OrthoDB:EOG476JZH ChiTaRS:LGR4 GenomeRNAi:55366
NextBio:59753 ArrayExpress:Q9BXB1 Bgee:Q9BXB1 CleanEx:HS_LGR4
Genevestigator:Q9BXB1 GermOnline:ENSG00000205213 GO:GO:0072202
GO:GO:0072224 Uniprot:Q9BXB1
Length = 951
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 32/99 (32%), Positives = 46/99 (46%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
C + C C G V C K T +PE L TQ LD+S N + + F+ L E
Sbjct: 29 CAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFLEE 85
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEA 130
L L+ N + F+ L + EL+ L L N ++ + EA
Sbjct: 86 LQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEA 124
>MGI|MGI:1891468 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G
protein-coupled receptor 4" species:10090 "Mus musculus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0035239 "tube
morphogenesis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0050673 "epithelial cell proliferation" evidence=IMP]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IMP] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IMP]
[GO:0072224 "metanephric glomerulus development" evidence=IMP]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1891468
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AL928922
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OMA:DGYWSDC OrthoDB:EOG476JZH
ChiTaRS:LGR4 GO:GO:0072202 GO:GO:0072224 EMBL:AL845423
EMBL:AY255619 EMBL:AK044357 EMBL:BC056637 IPI:IPI00753252
RefSeq:NP_766259.2 UniGene:Mm.277351 UniGene:Mm.485992
ProteinModelPortal:A2ARI4 SMR:A2ARI4 STRING:A2ARI4
PhosphoSite:A2ARI4 PRIDE:A2ARI4 DNASU:107515
Ensembl:ENSMUST00000046548 GeneID:107515 KEGG:mmu:107515
UCSC:uc008lmq.1 HOGENOM:HOG000231829 InParanoid:A2ARI4
NextBio:358950 Bgee:A2ARI4 Genevestigator:A2ARI4 Uniprot:A2ARI4
Length = 951
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 32/99 (32%), Positives = 46/99 (46%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
C + C C G V C K T +PE L TQ LD+S N + + F+ L E
Sbjct: 29 CAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFLEE 85
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEA 130
L L+ N + F+ L + EL+ L L N ++ + EA
Sbjct: 86 LQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEA 124
>MGI|MGI:2441805 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G
protein-coupled receptor 6" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450
MGI:MGI:2441805 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GO:GO:0016500 HSSP:P21809 GeneTree:ENSGT00650000092962
HOVERGEN:HBG031675 HOGENOM:HOG000231829 CTD:59352 KO:K08399
OrthoDB:EOG4SQWW8 EMBL:AK137380 EMBL:BC026896 EMBL:AY255562
IPI:IPI00321212 RefSeq:NP_001028581.1 UniGene:Mm.279594
ProteinModelPortal:Q3UVD5 SMR:Q3UVD5 IntAct:Q3UVD5
PhosphoSite:Q3UVD5 PRIDE:Q3UVD5 Ensembl:ENSMUST00000044828
GeneID:329252 KEGG:mmu:329252 UCSC:uc007csq.1 InParanoid:Q3UVD5
OMA:AYGKAPS NextBio:398648 Bgee:Q3UVD5 Genevestigator:Q3UVD5
Uniprot:Q3UVD5
Length = 967
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 37/127 (29%), Positives = 55/127 (43%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYT---FRKLINLVE 91
CP+ C C+ G + C + +P LD T LDLS N L F L L E
Sbjct: 35 CPAPCHCQEDGIMLSADCSELGLSVVPADLDPLTAYLDLSMNNLTELQPGLFHHLRFLEE 94
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNIRPI 151
L LS N + +P + L+ L L N ++ I EA +P +L+ N+ +
Sbjct: 95 LRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEALWELP--SLQSLRLDANLISL 152
Query: 152 TPDVTAE 158
P+ + E
Sbjct: 153 VPERSFE 159
>UNIPROTKB|J9JHM0 [details] [associations]
symbol:OBSCN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004713 "protein tyrosine kinase activity" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR000048
InterPro:IPR000719 InterPro:IPR001452 InterPro:IPR001849
InterPro:IPR002290 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR008266 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00041 Pfam:PF00069 Pfam:PF00612
Pfam:PF00621 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS00109
PROSITE:PS50003 PROSITE:PS50010 PROSITE:PS50011 PROSITE:PS50096
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00015 SMART:SM00060
SMART:SM00220 SMART:SM00233 SMART:SM00326 GO:GO:0005524
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 SUPFAM:SSF49265
SUPFAM:SSF56112 GO:GO:0004674 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0005622 SUPFAM:SSF50044
GO:GO:0004713 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
GO:GO:0035023 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR020675
PANTHER:PTHR22964 OMA:CEVGQEK InterPro:IPR020682
PANTHER:PTHR22964:SF11 GeneTree:ENSGT00700000104431
EMBL:AAEX03009171 EMBL:AAEX03009172 EMBL:AAEX03009173
EMBL:AAEX03009174 EMBL:AAEX03009175 Ensembl:ENSCAFT00000050108
Uniprot:J9JHM0
Length = 7923
Score = 136 (52.9 bits), Expect = 0.00011, P = 0.00011
Identities = 33/100 (33%), Positives = 51/100 (51%)
Query: 161 ENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMS 220
++ TLSC+ G+P P++ W EK + G ++ + L LTI+ + +
Sbjct: 24 KDATLSCQIVGNPTPQVSW---EKDQLPVEEGA------RFRLAQDGDLYRLTILDLALG 74
Query: 221 DSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPDPVYLV 260
DSG Y CRA+N GE F + L V E A A+ P +L+
Sbjct: 75 DSGQYVCRARNAIGEAFAAVGLQV-DAEAACAEQAPHFLL 113
>ZFIN|ZDB-GENE-040426-1821 [details] [associations]
symbol:nptnb "neuroplastin b" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR007110 PROSITE:PS50835 ZFIN:ZDB-GENE-040426-1821
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG008120
InterPro:IPR013151 Pfam:PF00047 InterPro:IPR027112
PANTHER:PTHR10075:SF5 EMBL:BC065957 EMBL:CU638753 IPI:IPI00501107
RefSeq:NP_991268.1 UniGene:Dr.17800 IntAct:Q6NZV3 GeneID:403006
KEGG:dre:403006 CTD:403006 InParanoid:Q6NZV3 NextBio:20816813
Uniprot:Q6NZV3
Length = 403
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 43/145 (29%), Positives = 72/145 (49%)
Query: 131 FINVPKLN--LEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIAN 188
F + P N +E AC P I +E EN TL C++ G P P W +++K+ +
Sbjct: 226 FKSAPNANASIEVKAC-PEIIGHKRSENKKEGENATLYCKSAGYPHPV--WTWRKKVGRD 282
Query: 189 ISSGLANMNKRQYIIKTINSLSNLTIVAVTM-SDSGIYTCRAKNGAGEVFTNISLNVIKV 247
+ N R +I+ N + L+I+ + + +D G Y C A N G FTN S +++V
Sbjct: 283 SYMDIDNSTGRFFIVNREN-FTELSILDLDIRTDPGEYFCNASNIIG--FTNSS-TILRV 338
Query: 248 ETAVAQPDPVY-LVASLTTVVTIIL 271
+ +A P ++A + +V II+
Sbjct: 339 RSHLAPLWPFLGVLAEIIILVVIIV 363
>UNIPROTKB|F1MLX5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:DAAA02041144
IPI:IPI00713357 Ensembl:ENSBTAT00000003370 Uniprot:F1MLX5
Length = 1034
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 33/106 (31%), Positives = 49/106 (46%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
C + C C G V C K T +PE L TQ+LD+S N + + F+ L E
Sbjct: 112 CAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQLLDISMNNITQLPEDAFKNFPFLEE 168
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L L+ N + F+ L + EL+ L L N ++ + EA + L
Sbjct: 169 LRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSSL 214
>UNIPROTKB|E2RGS8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00373 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:AAEX03004986 EMBL:AAEX03004981 EMBL:AAEX03004982
EMBL:AAEX03004983 EMBL:AAEX03004984 EMBL:AAEX03004985
RefSeq:XP_848875.1 Ensembl:ENSCAFT00000016729 GeneID:490231
KEGG:cfa:490231 NextBio:20863298 Uniprot:E2RGS8
Length = 965
Score = 131 (51.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 36/127 (28%), Positives = 55/127 (43%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYT---FRKLINLVE 91
CP+ C C+ G + C + +P LD T LDLS N L F L L E
Sbjct: 33 CPAPCRCQEDGIMLSADCSELGLSAVPRDLDPLTAYLDLSMNNLTELQPGLFHHLRFLEE 92
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNIRPI 151
L LS N + +P H + L+ L L N + + +A +P +L+ N+ +
Sbjct: 93 LRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGVPADALWELP--SLQSLRLDANLISL 150
Query: 152 TPDVTAE 158
P+ + E
Sbjct: 151 VPERSFE 157
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 160 NENVTLSCRATG-SPVPKIKWIFKEKIIANISSGLA 194
N + LS A G P+P +K++ AN SGL+
Sbjct: 577 NGLLLLSVFAGGPGPLPPVKFVVGAIAGANAVSGLS 612
>UNIPROTKB|F1NYN0 [details] [associations]
symbol:NCAM1 "Neural cell adhesion molecule 1" species:9031
"Gallus gallus" [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00680000099931
IPI:IPI00591739 EMBL:AADN02058023 EMBL:AADN02058024
EMBL:AADN02058025 ProteinModelPortal:F1NYN0
Ensembl:ENSGALT00000040522 ArrayExpress:F1NYN0 Uniprot:F1NYN0
Length = 848
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 29/99 (29%), Positives = 53/99 (53%)
Query: 137 LNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
++L+ FA P I + E + +TL+C A+G P+P I W + NIS+ +
Sbjct: 300 IHLKVFA-KPKITYVENKTAMELEDQITLTCEASGDPIPSITWKTSTR---NISNEEKTL 355
Query: 197 NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE 235
+ R ++++ +S+LT+ + +D+G Y C A N G+
Sbjct: 356 DGR-IVVRSHARVSSLTLKEIQYTDAGEYVCTASNTIGQ 393
>UNIPROTKB|F1P2E9 [details] [associations]
symbol:MYPN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0015630 "microtubule cytoskeleton" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0030018 "Z disc"
evidence=IEA] [GO:0045214 "sarcomere organization" evidence=IEA]
[GO:0051371 "muscle alpha-actinin binding" evidence=IEA]
InterPro:IPR007110 PROSITE:PS50835 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030018 GO:GO:0015630 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00690000101977 OMA:YWKKDNE
EMBL:AADN02028015 IPI:IPI00594082 Ensembl:ENSGALT00000006252
Uniprot:F1P2E9
Length = 1327
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK 204
+P + D++A E + V CR G+P PK++W ++E + S + K+ +
Sbjct: 441 APVFTKMLQDISASEGQLVVFECRVKGAPSPKVEW-YREGTLIEDSPDFRILQKKPRSMA 499
Query: 205 TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
+ L I V DSG +TC A N G V + L+V
Sbjct: 500 EPEEICTLVIAEVFSEDSGSFTCTASNKYGTVSSIAQLSV 539
>UNIPROTKB|A6NDA9 [details] [associations]
symbol:LRIT2 "Leucine-rich repeat, immunoglobulin-like
domain and transmembrane domain-containing protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR020901
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:AC022389 CTD:340745 HOVERGEN:HBG060406 OrthoDB:EOG4X97H6
EMBL:BX648524 IPI:IPI01015843 RefSeq:NP_001017924.1
UniGene:Hs.450425 ProteinModelPortal:A6NDA9 SMR:A6NDA9 PRIDE:A6NDA9
Ensembl:ENST00000372113 GeneID:340745 KEGG:hsa:340745
UCSC:uc001kcy.3 GeneCards:GC10M085971 HGNC:HGNC:23443 HPA:HPA037788
neXtProt:NX_A6NDA9 PharmGKB:PA162394344 eggNOG:NOG331103
InParanoid:A6NDA9 GenomeRNAi:340745 NextBio:98010
ArrayExpress:A6NDA9 Bgee:A6NDA9 CleanEx:HS_LRIT2
Genevestigator:A6NDA9 Uniprot:A6NDA9
Length = 550
Score = 127 (49.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 50/158 (31%), Positives = 71/158 (44%)
Query: 99 IQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFAC-SPNIRPITPDVTA 157
+QFV S L IL L G P+ K + F + +L+ AC P I + ++T
Sbjct: 212 VQFVKSITLPVILVNSYLICQG-PLSK-AGQLF-HETELS----ACMKPQISTPSANITI 264
Query: 158 EENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAV 217
+NVTL C A SP P I W + + ++ + +LS L I A
Sbjct: 265 RAGQNVTLRCLAQASPSPSIAWTYPLSMWREFDVLTSSTGED-------TALSELAIPAA 317
Query: 218 TMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAVAQPD 255
+ DSG YTC A N G+ ISL+V + A+ PD
Sbjct: 318 HLVDSGNYTCMASNSIGKSNLVISLHVQPAQ-ALHAPD 354
Score = 38 (18.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 276 VVLCIILLKAKRKRYA 291
VVLC++LL YA
Sbjct: 468 VVLCVVLLAVPVGAYA 483
>ZFIN|ZDB-GENE-110414-1 [details] [associations]
symbol:wfikkn2b "WAP, follistatin/kazal,
immunoglobulin, kunitz and netrin domain containing 2b"
species:7955 "Danio rerio" [GO:0004867 "serine-type endopeptidase
inhibitor activity" evidence=IEA] InterPro:IPR002223
InterPro:IPR007110 Pfam:PF00014 PRINTS:PR00759 PROSITE:PS50279
PROSITE:PS50835 SMART:SM00131 ZFIN:ZDB-GENE-110414-1
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004867
InterPro:IPR003598 SMART:SM00408 Gene3D:4.10.410.10
InterPro:IPR020901 SUPFAM:SSF57362 PROSITE:PS00280
InterPro:IPR008993 SUPFAM:SSF50242 InterPro:IPR013098 Pfam:PF07679
EMBL:JQ266019 Uniprot:J7K3J9
Length = 287
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 33/97 (34%), Positives = 44/97 (45%)
Query: 156 TAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQ-YIIKTINSLSNLTI 214
+A + V+ C G PVP+I W +K S +M Q Y + ++ L I
Sbjct: 28 SASIGDTVSFLCDVVGHPVPEITW---QK-----QSESVHMKPNQVYGNVVVTNIGQLVI 79
Query: 215 VAVTMSDSGIYTCRAKNGAGEVFTNISLNVIKVETAV 251
+ DSGIYTC A N G V N L+V K E V
Sbjct: 80 YNAQVQDSGIYTCTAANAGGSVQANFPLSVSKPEAVV 116
>MGI|MGI:97282 [details] [associations]
symbol:Ncam2 "neural cell adhesion molecule 2" species:10090
"Mus musculus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030424 "axon" evidence=IDA] [GO:0031225 "anchored to membrane"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 MGI:MGI:97282 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
GO:GO:0031225 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679 eggNOG:NOG308439
GeneTree:ENSGT00680000099931 KO:K06491 HOGENOM:HOG000074124
HOVERGEN:HBG052579 CTD:4685 OMA:EPTISWY OrthoDB:EOG4MGS6S
EMBL:AF001287 EMBL:AF001286 EMBL:AF016619 EMBL:BC119027
EMBL:BC119029 IPI:IPI00127556 IPI:IPI00322617 RefSeq:NP_001106679.1
RefSeq:NP_035084.1 UniGene:Mm.433941 ProteinModelPortal:O35136
SMR:O35136 IntAct:O35136 MINT:MINT-1177341 STRING:O35136
PhosphoSite:O35136 PaxDb:O35136 PRIDE:O35136
Ensembl:ENSMUST00000037785 Ensembl:ENSMUST00000067602 GeneID:17968
KEGG:mmu:17968 UCSC:uc007zta.2 UCSC:uc007ztb.2 InParanoid:O35136
NextBio:292909 Bgee:O35136 CleanEx:MM_NCAM2 Genevestigator:O35136
GermOnline:ENSMUSG00000022762 Uniprot:O35136
Length = 837
Score = 131 (51.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLT 213
+ TAE E +TL+C+A+GSP P I W K+I N++ YI+K N+ LT
Sbjct: 219 NATAERGEEMTLTCKASGSPDPTISWFRNGKLIEE--------NEK-YILKGSNT--ELT 267
Query: 214 IVAVTMSDSGIYTCRAKNGAGE 235
+ + D G Y C+A N AGE
Sbjct: 268 VRNIINKDGGSYVCKATNKAGE 289
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 14/65 (21%), Positives = 28/65 (43%)
Query: 236 VFTNISLNVIKVETAVAQPDPVYLVASLTTVVTIILTACFVVLCIILLKAKRKRYADVNR 295
+F + L I + VA + L+ +T V + C +++CI +K +
Sbjct: 695 LFNGLGLGAI-IGLGVAA---LLLILVVTDVSCFFIRQCGLLMCITRRMCGKKSGSSGKS 750
Query: 296 RYLED 300
+ LE+
Sbjct: 751 KELEE 755
>UNIPROTKB|F1NR89 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0010596 GO:GO:0001933 GO:GO:0071676 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0070100
GO:GO:0090288 GO:GO:0045499 Pfam:PF01463 GO:GO:0010593
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050929
GO:GO:0090024 GO:GO:0051058 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00821752 Ensembl:ENSGALT00000037322 ArrayExpress:F1NR89
Uniprot:F1NR89
Length = 870
Score = 123 (48.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 44/167 (26%), Positives = 72/167 (43%)
Query: 25 CTGCLQVFAECPST-CECKWKGGKETVL---CKAKNFTTIPEQLD--VGTQVLDLSDN-- 76
CT CL C + + KG + V FT +P++L ++DLS+N
Sbjct: 72 CT-CLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRI 130
Query: 77 -FLDRYTFRKLINLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVP 135
L +F + L+ L LSYN+++ +P+ D + LR L L GN I + AF ++
Sbjct: 131 STLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLS 190
Query: 136 KLN-----LEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKI 177
L+ C N++ ++ V +E E C G K+
Sbjct: 191 ALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKL 237
Score = 47 (21.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 196 MNKRQYI-IKT--INSLSNLTIVAVTMSDSGI 224
+NK Y+ I + I+S +N+T+ T DSGI
Sbjct: 506 VNKESYLQIPSAKIHSQTNITLQIATDEDSGI 537
>UNIPROTKB|I3LT68 [details] [associations]
symbol:LOC100620561 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050829 "defense response to Gram-negative
bacterium" evidence=IEA] [GO:0050707 "regulation of cytokine
secretion" evidence=IEA] [GO:0046696 "lipopolysaccharide receptor
complex" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0042116 "macrophage activation" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0001875 "lipopolysaccharide
receptor activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR027168 PROSITE:PS51450 InterPro:IPR000483 SMART:SM00082
GeneTree:ENSGT00700000104185 PANTHER:PTHR24365:SF9
Ensembl:ENSSSCT00000029553 Uniprot:I3LT68
Length = 653
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 32/89 (35%), Positives = 44/89 (49%)
Query: 52 CKAKNFTTIPEQLDVGTQVLDLSDNFL---DRYTFRKLINLVELDLSYNQIQFVPSHILD 108
C NF IP+ + ++LDLS N+L D +F L LDLS +IQ +
Sbjct: 40 CMELNFYKIPDNIPTSVKILDLSFNYLSHLDSNSFSSFPELQVLDLSRCEIQTIDDDAYQ 99
Query: 109 SILELRELKLSGNPIQKITHEAFINVPKL 137
+ L L L+GNPIQ + AF +P L
Sbjct: 100 GLNYLSTLILTGNPIQSLALGAFSGLPSL 128
>UNIPROTKB|F1NEL3 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0030539 "male genitalia development" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0050673 "epithelial cell proliferation"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0072202 "cell differentiation involved in metanephros
development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0045892
GO:GO:0045893 InterPro:IPR003591 SMART:SM00369 GO:GO:0090190
GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 GeneTree:ENSGT00650000092962 OMA:DGYWSDC
EMBL:AADN02040116 EMBL:AADN02040117 EMBL:AADN02040118
EMBL:AADN02040119 IPI:IPI00595681 ProteinModelPortal:F1NEL3
Ensembl:ENSGALT00000019904 Uniprot:F1NEL3
Length = 1038
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 31/99 (31%), Positives = 47/99 (47%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRY---TFRKLINLVE 91
CP++C C G V C + +P L TQ LD+S N + R F+ L E
Sbjct: 112 CPASCSCD---GDRGVDCSGRGLAAVPPGLSAFTQALDVSMNNITRLPEDAFKNFPYLEE 168
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEA 130
L L+ N + F+ L + EL+ L L N ++ + +EA
Sbjct: 169 LRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPNEA 207
>ZFIN|ZDB-GENE-090205-2 [details] [associations]
symbol:nrg2b "neuregulin 2b" species:7955 "Danio
rerio" [GO:0005102 "receptor binding" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000742 InterPro:IPR002154
InterPro:IPR007110 Pfam:PF02158 PROSITE:PS50026 PROSITE:PS50835
SMART:SM00181 ZFIN:ZDB-GENE-090205-2 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0009790 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00700000104510 EMBL:BX005008
EMBL:BX323592 EMBL:CR407701 IPI:IPI00996391
ProteinModelPortal:E7FGA4 Ensembl:ENSDART00000129055 Bgee:E7FGA4
Uniprot:E7FGA4
Length = 697
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 39/146 (26%), Positives = 62/146 (42%)
Query: 107 LDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNIRPITPDVTAEENENVTLS 166
+D E K S P+ +V + +D A +P ++P+ +E + +TL
Sbjct: 102 MDPTEEPLVFKASFAPLDSTEKTLKKDVESVLCKDCASAPKVKPMDSQ-WLQEGKKLTLK 160
Query: 167 CRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYT 226
C A G+P P W +K+ G K+ IKT S L I V + DSG YT
Sbjct: 161 CEAVGNPSPSFNW-YKD--------GSQLRQKKTVKIKTNKKNSKLHISKVRLEDSGNYT 211
Query: 227 CRAKNGAGEVFTNISLNVIKVETAVA 252
C +N G ++V + T ++
Sbjct: 212 CVVENSLGRENATSFVSVQSITTTLS 237
>MGI|MGI:1916052 [details] [associations]
symbol:Mypn "myopalladin" species:10090 "Mus musculus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008092
"cytoskeletal protein binding" evidence=ISO] [GO:0017124 "SH3
domain binding" evidence=ISO] [GO:0030018 "Z disc"
evidence=ISO;IDA] [GO:0031674 "I band" evidence=ISO;IDA]
[GO:0045214 "sarcomere organization" evidence=ISO] [GO:0051371
"muscle alpha-actinin binding" evidence=ISO] InterPro:IPR007110
PROSITE:PS50835 MGI:MGI:1916052 GO:GO:0005634 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030018 GO:GO:0015630 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0031674
GO:GO:0045214 InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000028074
GeneTree:ENSGT00690000101977 CTD:84665 eggNOG:NOG136920
HOVERGEN:HBG059166 OMA:YWKKDNE EMBL:AK220521 EMBL:AK036458
EMBL:BC052872 IPI:IPI00929815 RefSeq:NP_892037.2 UniGene:Mm.259767
ProteinModelPortal:Q5DTJ9 SMR:Q5DTJ9 STRING:Q5DTJ9
PhosphoSite:Q5DTJ9 PaxDb:Q5DTJ9 PRIDE:Q5DTJ9 DNASU:68802
Ensembl:ENSMUST00000095580 GeneID:68802 KEGG:mmu:68802
UCSC:uc007fjy.2 InParanoid:Q5DTJ9 OrthoDB:EOG4ZKJKH NextBio:327967
Bgee:Q5DTJ9 CleanEx:MM_MYPN Genevestigator:Q5DTJ9
GermOnline:ENSMUSG00000020067 Uniprot:Q5DTJ9
Length = 1315
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 30/108 (27%), Positives = 50/108 (46%)
Query: 137 LNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
LN + +P + +++A E + V CR G+P PK++W ++E + S +
Sbjct: 423 LNGKPIIAAPVFTKMLQNLSASEGQLVVFECRVKGAPSPKVEW-YREGTLIEDSPDFRIL 481
Query: 197 NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
K+ + + L I V DSG +TC A N G V + L+V
Sbjct: 482 QKKPRSMAEPEEICTLVIAEVFSEDSGCFTCTASNKYGTVSSIAQLDV 529
>UNIPROTKB|F1NLB3 [details] [associations]
symbol:NCAM1 "Neural cell adhesion molecule 1" species:9031
"Gallus gallus" [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00680000099931
EMBL:AADN02058023 EMBL:AADN02058024 EMBL:AADN02058025
IPI:IPI00597016 Ensembl:ENSGALT00000012723 ArrayExpress:F1NLB3
Uniprot:F1NLB3
Length = 1074
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 29/99 (29%), Positives = 53/99 (53%)
Query: 137 LNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
++L+ FA P I + E + +TL+C A+G P+P I W + NIS+ +
Sbjct: 284 IHLKVFA-KPKITYVENKTAMELEDQITLTCEASGDPIPSITWKTSTR---NISNEEKTL 339
Query: 197 NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE 235
+ R ++++ +S+LT+ + +D+G Y C A N G+
Sbjct: 340 DGR-IVVRSHARVSSLTLKEIQYTDAGEYVCTASNTIGQ 377
>UNIPROTKB|P13590 [details] [associations]
symbol:NCAM1 "Neural cell adhesion molecule 1" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001928 "regulation of exocyst assembly" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0009897 "external side of plasma membrane" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0050850 "positive regulation of calcium-mediated signaling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR009138
Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0009897 GO:GO:0030424 GO:GO:0043025
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0050850 GO:GO:0030426 GO:GO:0007166
Reactome:REACT_115433 InterPro:IPR013098 Pfam:PF07679 GO:GO:0034109
eggNOG:NOG308439 HOGENOM:HOG000074124 HOVERGEN:HBG052579
OrthoDB:EOG40VVP1 EMBL:M15861 EMBL:M15860 EMBL:M15922 EMBL:M15923
EMBL:M15924 EMBL:M21178 EMBL:M21179 EMBL:M21180 EMBL:M15929
EMBL:M15930 EMBL:M15931 EMBL:M15932 EMBL:M15933 EMBL:M15934
EMBL:L29437 EMBL:M15935 EMBL:M15937 EMBL:M15938 EMBL:M15939
EMBL:M15936 EMBL:X04479 EMBL:X70342 EMBL:Z12128 IPI:IPI00591580
IPI:IPI00591739 IPI:IPI00595516 IPI:IPI00680755 PIR:A43613
UniGene:Gga.35109 PDB:1IE5 PDBsum:1IE5 ProteinModelPortal:P13590
SMR:P13590 IntAct:P13590 STRING:P13590 PRIDE:P13590
InParanoid:P13590 EvolutionaryTrace:P13590 NextBio:20829295
GO:GO:0001928 Uniprot:P13590
Length = 1091
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 29/99 (29%), Positives = 53/99 (53%)
Query: 137 LNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
++L+ FA P I + E + +TL+C A+G P+P I W + NIS+ +
Sbjct: 300 IHLKVFA-KPKITYVENKTAMELEDQITLTCEASGDPIPSITWKTSTR---NISNEEKTL 355
Query: 197 NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE 235
+ R ++++ +S+LT+ + +D+G Y C A N G+
Sbjct: 356 DGR-IVVRSHARVSSLTLKEIQYTDAGEYVCTASNTIGQ 393
>UNIPROTKB|F1NLB0 [details] [associations]
symbol:NCAM1 "Neural cell adhesion molecule 1" species:9031
"Gallus gallus" [GO:0001928 "regulation of exocyst assembly"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0050850 "positive regulation of calcium-mediated signaling"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR009138 Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009897 GO:GO:0030424 GO:GO:0043025 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0050850 GO:GO:0030426 GO:GO:0007166 InterPro:IPR013098
Pfam:PF07679 GO:GO:0034109 GeneTree:ENSGT00680000099931 KO:K06491
CTD:4684 IPI:IPI00680755 UniGene:Gga.35109 GO:GO:0001928
OMA:DVTCYFL EMBL:AADN02058023 EMBL:AADN02058024 EMBL:AADN02058025
RefSeq:NP_001122300.2 Ensembl:ENSGALT00000012724 GeneID:428253
KEGG:gga:428253 ArrayExpress:F1NLB0 Uniprot:F1NLB0
Length = 1109
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 29/99 (29%), Positives = 53/99 (53%)
Query: 137 LNLEDFACSPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANM 196
++L+ FA P I + E + +TL+C A+G P+P I W + NIS+ +
Sbjct: 300 IHLKVFA-KPKITYVENKTAMELEDQITLTCEASGDPIPSITWKTSTR---NISNEEKTL 355
Query: 197 NKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGE 235
+ R ++++ +S+LT+ + +D+G Y C A N G+
Sbjct: 356 DGR-IVVRSHARVSSLTLKEIQYTDAGEYVCTASNTIGQ 393
>UNIPROTKB|P19320 [details] [associations]
symbol:VCAM1 "Vascular cell adhesion protein 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0002526 "acute
inflammatory response" evidence=IEA] [GO:0002544 "chronic
inflammatory response" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0007568 "aging" evidence=IEA]
[GO:0007584 "response to nutrient" evidence=IEA] [GO:0010212
"response to ionizing radiation" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0060710 "chorio-allantoic fusion"
evidence=IEA] [GO:0071333 "cellular response to glucose stimulus"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0019221 "cytokine-mediated signaling pathway" evidence=TAS]
[GO:0050776 "regulation of immune response" evidence=TAS]
[GO:0060333 "interferon-gamma-mediated signaling pathway"
evidence=TAS] [GO:0007155 "cell adhesion" evidence=IDA] [GO:0022614
"membrane to membrane docking" evidence=IEP] [GO:0005902
"microvillus" evidence=IDA] [GO:0030175 "filopodium" evidence=IDA]
[GO:0045177 "apical part of cell" evidence=IDA] [GO:0042102
"positive regulation of T cell proliferation" evidence=IDA]
[GO:0007159 "leukocyte cell-cell adhesion" evidence=IDA]
[GO:0050901 "leukocyte tethering or rolling" evidence=IEP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0030183 "B cell
differentiation" evidence=IC] [GO:0007157 "heterophilic cell-cell
adhesion" evidence=IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005178 "integrin binding" evidence=IDA]
[GO:0009897 "external side of plasma membrane" evidence=IDA]
[GO:0050839 "cell adhesion molecule binding" evidence=IDA;IPI]
[GO:0071065 "alpha9-beta1 integrin-vascular cell adhesion
molecule-1 complex" evidence=IDA] [GO:0002102 "podosome"
evidence=IDA] InterPro:IPR003987 InterPro:IPR003989
InterPro:IPR007110 InterPro:IPR008424 Pfam:PF05790 PRINTS:PR01472
PRINTS:PR01474 PROSITE:PS50835 GO:GO:0016021 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0005615 GO:GO:0007507
GO:GO:0060333 GO:GO:0050776 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009897 GO:GO:0071333 GO:GO:0007568 GO:GO:0001666
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007584 GO:GO:0045177 GO:GO:0042383 EMBL:CH471097
GO:GO:0010212 GO:GO:0030175 GO:GO:0005178 GO:GO:0002526
GO:GO:0030183 DrugBank:DB01136 GO:GO:0002102 GO:GO:0042102
GO:GO:0050839 GO:GO:0007157 Pathway_Interaction_DB:txa2pathway
InterPro:IPR013098 Pfam:PF07679 GO:GO:0005902
Pathway_Interaction_DB:anthraxpathway
Pathway_Interaction_DB:a4b1_paxdep_pathway
Pathway_Interaction_DB:a4b1_paxindep_pathway GO:GO:0002544
InterPro:IPR013151 Pfam:PF00047 GO:GO:0050901 GO:GO:0060710
GO:GO:0022614 CleanEx:HS_L1CAM CTD:7412 eggNOG:NOG148090
HOGENOM:HOG000004820 HOVERGEN:HBG053965 KO:K06527 EMBL:M30257
EMBL:X53051 EMBL:M60335 EMBL:M73255 EMBL:AF536818 EMBL:AK291732
EMBL:AK296692 EMBL:AC093428 EMBL:BC017276 EMBL:BC068490
EMBL:BC085003 EMBL:M92431 IPI:IPI00018136 IPI:IPI00082827
IPI:IPI00643090 PIR:A41288 PIR:B41288 RefSeq:NP_001069.1
RefSeq:NP_001186763.1 RefSeq:NP_542413.1 UniGene:Hs.109225 PDB:1IJ9
PDB:1VCA PDB:1VSC PDBsum:1IJ9 PDBsum:1VCA PDBsum:1VSC
ProteinModelPortal:P19320 SMR:P19320 IntAct:P19320 STRING:P19320
PhosphoSite:P19320 DMDM:137560 PaxDb:P19320 PRIDE:P19320 DNASU:7412
Ensembl:ENST00000294728 Ensembl:ENST00000347652
Ensembl:ENST00000370119 GeneID:7412 KEGG:hsa:7412 UCSC:uc001dti.3
UCSC:uc001dtj.3 GeneCards:GC01P101185 HGNC:HGNC:12663 HPA:CAB005426
MIM:192225 neXtProt:NX_P19320 PharmGKB:PA37286 InParanoid:P19320
OMA:YPFDRLE BindingDB:P19320 ChEMBL:CHEMBL3735 ChiTaRS:VCAM1
EvolutionaryTrace:P19320 GenomeRNAi:7412 NextBio:29020
PMAP-CutDB:P19320 ArrayExpress:P19320 Bgee:P19320 CleanEx:HS_VCAM1
Genevestigator:P19320 GermOnline:ENSG00000162692 GO:GO:0071065
Uniprot:P19320
Length = 739
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 65/269 (24%), Positives = 118/269 (43%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPE-----QLDVGTQVLDLSDNFLDRYTFRKL-IN 88
C +TCE + ++ + + +F PE L+ G + + + D Y F +L I+
Sbjct: 95 CTATCESRKL--EKGIQVEIYSFPKDPEIHLSGPLEAGKPIT-VKCSVADVYPFDRLEID 151
Query: 89 LVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNI 148
L++ D +F+ S LE + L+++ P+ + + + KL++++ P +
Sbjct: 152 LLKGDHLMKSQEFLEDADRKS-LETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTV 210
Query: 149 R-----------P------ITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISS 191
R P + P +E +VT++C + G P P+I W S
Sbjct: 211 RQAVKELQVYISPKNTVISVNPSTKLQEGGSVTMTCSSEGLPAPEIFW----------SK 260
Query: 192 GLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNVI-KVETA 250
L N N ++ ++ + LT++A+ M DSGIY C N G+ + L V K T
Sbjct: 261 KLDNGN-----LQHLSGNATLTLIAMRMEDSGIYVCEGVNLIGKNRKEVELIVQEKPFTV 315
Query: 251 VAQPDPVYLVASLTTVVTIILTACFVVLC 279
P P + A + +++LT C V+ C
Sbjct: 316 EISPGP-RIAAQIGD--SVMLT-CSVMGC 340
Score = 117 (46.2 bits), Expect = 0.00097, P = 0.00097
Identities = 47/185 (25%), Positives = 83/185 (44%)
Query: 81 YTFRKL-INLVELDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNL 139
Y +L I L++ + I+F+ + S LE + L+++ P + T +A + KL++
Sbjct: 431 YPLDRLEIELLKGETILENIEFLEDTDMKS-LENKSLEMTFIPTIEDTGKALVCQAKLHI 489
Query: 140 EDFACSP-----------NIRP------ITPDVTAEENENVTLSCRATGSPVPKIKWIFK 182
+D P N+ P ++P EE +V ++C + G P PKI W
Sbjct: 490 DDMEFEPKQRQSTQTLYVNVAPRDTTVLVSPSSILEEGSSVNMTCLSQGFPAPKILW--- 546
Query: 183 EKIIANISSGLANMNKRQYIIKTINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISL 242
S L N ++ ++ + LT+++ M DSG+Y C N AG + L
Sbjct: 547 -------SRQLPNGE-----LQPLSENATLTLISTKMEDSGVYLCEGINQAGRSRKEVEL 594
Query: 243 NVIKV 247
+I+V
Sbjct: 595 -IIQV 598
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 34/106 (32%), Positives = 49/106 (46%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYTFRKLINLVELD- 93
C + C C G V C K T +PE L TQ L L+ N L + L L EL
Sbjct: 29 CAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQALQLAGNDLSFIHPKALSGLKELKV 85
Query: 94 --LSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKL 137
L NQ++ VPS + + L+ L+L N I + ++F + +L
Sbjct: 86 LTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQL 131
>UNIPROTKB|F5GWA6 [details] [associations]
symbol:MYPN "Myopalladin" species:9606 "Homo sapiens"
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR007110 PROSITE:PS50835 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 EMBL:AC024258 EMBL:AL512429
EMBL:AC016395 IPI:IPI00871200 HGNC:HGNC:23246
ProteinModelPortal:F5GWA6 SMR:F5GWA6 Ensembl:ENST00000540630
ArrayExpress:F5GWA6 Bgee:F5GWA6 Uniprot:F5GWA6
Length = 1320
Score = 135 (52.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 30/100 (30%), Positives = 49/100 (49%)
Query: 145 SPNIRPITPDVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIK 204
+P + +++A E + V CR G+P PK++W ++E + S + KR ++
Sbjct: 434 APVFTKMLQNLSASEGQLVVFECRVKGAPSPKVEW-YREGTLIEDSPDFRILQKRPVCME 492
Query: 205 TINSLSNLTIVAVTMSDSGIYTCRAKNGAGEVFTNISLNV 244
I + L I V DSG +TC A N G V + L+V
Sbjct: 493 HIEEICTLVIAEVFAEDSGCFTCTASNKYGTVSSIAQLHV 532
Score = 37 (18.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 72 DLSDNFLDRYTFRKLINLVELDLSYNQIQ 100
DLS FL + + +NL L ++Y+ ++
Sbjct: 62 DLSA-FLSQEELDESVNLARLAINYDPLE 89
>RGD|1560339 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G protein-coupled
receptor 6" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS51450 RGD:1560339 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GeneTree:ENSGT00650000092962 CTD:59352
KO:K08399 OrthoDB:EOG4SQWW8 OMA:AYGKAPS IPI:IPI00213568
RefSeq:XP_001062538.1 RefSeq:XP_573455.1 ProteinModelPortal:D3ZJU9
Ensembl:ENSRNOT00000006969 GeneID:498233 KEGG:rno:498233
UCSC:RGD:1560339 NextBio:699115 Uniprot:D3ZJU9
Length = 965
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 37/127 (29%), Positives = 55/127 (43%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYT---FRKLINLVE 91
CP+ C C+ G + C + +P LD T LDLS N L F L L E
Sbjct: 35 CPAPCHCQEDGIMLSADCSELGLSEVPADLDPLTAYLDLSMNNLTELQPGLFHHLRFLEE 94
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNIRPI 151
L LS N + +P + L+ L L N ++ I EA +P +L+ N+ +
Sbjct: 95 LRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGIPAEALWELP--SLQSLRLDANLISL 152
Query: 152 TPDVTAE 158
P+ + E
Sbjct: 153 VPERSFE 159
>UNIPROTKB|Q9HBX8 [details] [associations]
symbol:LGR6 "Leucine-rich repeat-containing G-protein
coupled receptor 6" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500 HOVERGEN:HBG031675
EMBL:AF190501 EMBL:AY358119 EMBL:AL356953 EMBL:BC047905
EMBL:AB049405 EMBL:AB083616 EMBL:AK027377 IPI:IPI00151908
IPI:IPI00479360 IPI:IPI00514691 RefSeq:NP_001017403.1
RefSeq:NP_001017404.1 RefSeq:NP_067649.2 UniGene:Hs.497402
ProteinModelPortal:Q9HBX8 SMR:Q9HBX8 STRING:Q9HBX8
PhosphoSite:Q9HBX8 DMDM:158519993 PaxDb:Q9HBX8 PRIDE:Q9HBX8
Ensembl:ENST00000255432 Ensembl:ENST00000367278
Ensembl:ENST00000439764 GeneID:59352 KEGG:hsa:59352 UCSC:uc001gxu.3
UCSC:uc001gxv.3 UCSC:uc001gxw.3 CTD:59352 GeneCards:GC01P202163
HGNC:HGNC:19719 MIM:606653 neXtProt:NX_Q9HBX8 PharmGKB:PA134927114
InParanoid:Q9HBX8 KO:K08399 OrthoDB:EOG4SQWW8 GenomeRNAi:59352
NextBio:65269 ArrayExpress:Q9HBX8 Bgee:Q9HBX8 CleanEx:HS_LGR6
Genevestigator:Q9HBX8 Uniprot:Q9HBX8
Length = 967
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 37/127 (29%), Positives = 54/127 (42%)
Query: 35 CPSTCECKWKGGKETVLCKAKNFTTIPEQLDVGTQVLDLSDNFLDRYT---FRKLINLVE 91
CP+ C C+ G + C + +P LD T LDLS N L F L L E
Sbjct: 35 CPAPCHCQEDGIMLSADCSELGLSAVPGDLDPLTAYLDLSMNNLTELQPGLFHHLRFLEE 94
Query: 92 LDLSYNQIQFVPSHILDSILELRELKLSGNPIQKITHEAFINVPKLNLEDFACSPNIRPI 151
L LS N + +P + L+ L L N + I EA +P +L+ N+ +
Sbjct: 95 LRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELP--SLQSLRLDANLISL 152
Query: 152 TPDVTAE 158
P+ + E
Sbjct: 153 VPERSFE 159
>UNIPROTKB|F1NDT3 [details] [associations]
symbol:NCAM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR009138
Pfam:PF00041 PRINTS:PR01838 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
GO:GO:0030424 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00680000099931 OMA:EPTISWY EMBL:AADN02042982
EMBL:AADN02042983 EMBL:AADN02042984 IPI:IPI00578196
Ensembl:ENSGALT00000025378 Uniprot:F1NDT3
Length = 837
Score = 127 (49.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 154 DVTAEENENVTLSCRATGSPVPKIKWIFKEKIIANISSGLANMNKRQYIIKTINSLSNLT 213
+ TA+ E +TL CRATGSP P+I W K+I N++ Y+++ N+ LT
Sbjct: 219 NATADRGEAITLFCRATGSPPPEISWFRNGKLIEE--------NEK-YVLRGSNA--ELT 267
Query: 214 IVAVTMSDSGIYTCRAKNGAG 234
I + D+G Y C AKN AG
Sbjct: 268 IRDIKNIDAGPYICSAKNKAG 288
Score = 41 (19.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 260 VASLTTVVTIILTACFVVL-CIILLKAKRK 288
VA+L ++ +I +CF V C +L+ R+
Sbjct: 709 VAALLLILVVIDVSCFFVRQCGLLMCITRR 738
WARNING: HSPs involving 89 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 369 349 0.00099 116 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 339
No. of states in DFA: 606 (64 KB)
Total size of DFA: 238 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.58u 0.09s 31.67t Elapsed: 00:00:22
Total cpu time: 31.65u 0.10s 31.75t Elapsed: 00:00:22
Start: Thu Aug 15 13:11:33 2013 End: Thu Aug 15 13:11:55 2013
WARNINGS ISSUED: 2