Query psy12696
Match_columns 267
No_of_seqs 225 out of 1340
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 17:18:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12696.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12696hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4afl_A P29ING4, inhibitor of g 100.0 2.3E-30 7.8E-35 200.3 13.5 103 2-104 2-104 (104)
2 1weu_A Inhibitor of growth fam 99.9 1.6E-23 5.5E-28 157.1 8.4 71 197-267 19-89 (91)
3 1wen_A Inhibitor of growth fam 99.9 4.2E-23 1.4E-27 148.5 6.6 66 202-267 4-69 (71)
4 2g6q_A Inhibitor of growth pro 99.9 2.4E-23 8.3E-28 145.9 0.9 60 206-265 3-62 (62)
5 3c6w_A P28ING5, inhibitor of g 99.8 2.8E-22 9.5E-27 139.2 0.8 56 208-263 3-58 (59)
6 2vnf_A ING 4, P29ING4, inhibit 99.8 4.2E-22 1.4E-26 138.8 0.7 58 206-263 2-59 (60)
7 2jmi_A Protein YNG1, ING1 homo 99.8 9.7E-22 3.3E-26 147.2 0.9 56 207-262 19-75 (90)
8 1x4i_A Inhibitor of growth pro 99.8 5.7E-22 1.9E-26 142.2 -0.7 55 210-264 2-56 (70)
9 1wew_A DNA-binding family prot 99.7 5E-18 1.7E-22 124.3 2.8 63 203-266 5-75 (78)
10 2rsd_A E3 SUMO-protein ligase 99.5 1.5E-15 5.3E-20 108.1 1.3 57 207-264 3-66 (68)
11 3o70_A PHD finger protein 13; 99.5 3.6E-15 1.2E-19 106.1 2.3 52 209-263 14-67 (68)
12 3o7a_A PHD finger protein 13 v 99.5 6.2E-15 2.1E-19 99.4 1.1 47 213-262 3-51 (52)
13 2k16_A Transcription initiatio 99.4 1.2E-14 4E-19 105.4 1.1 53 210-265 14-70 (75)
14 1we9_A PHD finger family prote 99.4 2.4E-14 8.3E-19 100.5 2.3 53 211-266 3-61 (64)
15 1wep_A PHF8; structural genomi 99.4 1.8E-14 6.2E-19 105.5 1.3 51 211-264 9-64 (79)
16 1wem_A Death associated transc 99.4 1.3E-14 4.5E-19 105.4 0.4 52 209-264 12-71 (76)
17 1wee_A PHD finger family prote 99.4 4E-14 1.4E-18 101.8 2.1 52 210-264 12-67 (72)
18 3kqi_A GRC5, PHD finger protei 99.4 5.1E-14 1.7E-18 102.1 0.2 51 210-263 6-61 (75)
19 2lv9_A Histone-lysine N-methyl 99.3 3.7E-12 1.2E-16 96.9 4.7 51 211-264 25-77 (98)
20 4gne_A Histone-lysine N-methyl 99.2 3.5E-12 1.2E-16 98.3 2.9 49 210-261 11-60 (107)
21 2xb1_A Pygopus homolog 2, B-ce 99.2 1.7E-12 5.8E-17 100.0 0.4 47 215-264 4-62 (105)
22 1xwh_A Autoimmune regulator; P 99.2 5.4E-12 1.9E-16 89.1 2.0 48 213-265 7-57 (66)
23 1mm2_A MI2-beta; PHD, zinc fin 99.2 2E-11 6.7E-16 84.9 4.6 48 213-265 8-58 (61)
24 2ri7_A Nucleosome-remodeling f 99.2 1.7E-12 5.7E-17 108.4 -2.0 52 209-263 3-59 (174)
25 2kgg_A Histone demethylase jar 99.1 5.5E-12 1.9E-16 84.9 0.8 43 216-261 5-52 (52)
26 2vpb_A Hpygo1, pygopus homolog 99.1 2.9E-12 9.8E-17 90.2 -1.0 42 217-261 12-64 (65)
27 1f62_A Transcription factor WS 99.1 1.6E-11 5.4E-16 82.2 2.4 45 216-263 2-50 (51)
28 2l5u_A Chromodomain-helicase-D 99.1 1.8E-11 6.1E-16 85.1 2.6 47 212-263 9-58 (61)
29 2ku3_A Bromodomain-containing 99.1 7.2E-12 2.5E-16 89.7 0.1 51 212-265 14-68 (71)
30 2yql_A PHD finger protein 21A; 99.1 2.1E-11 7E-16 83.3 2.2 45 213-262 8-55 (56)
31 3kv5_D JMJC domain-containing 99.1 7.9E-12 2.7E-16 119.8 -0.9 51 209-262 32-87 (488)
32 2l43_A N-teminal domain from h 99.1 1.5E-11 5.1E-16 91.7 0.6 49 214-265 25-77 (88)
33 2puy_A PHD finger protein 21A; 99.1 1.3E-11 4.5E-16 85.4 0.1 47 214-265 5-54 (60)
34 2lri_C Autoimmune regulator; Z 99.0 1.2E-10 4.2E-15 82.0 3.9 45 215-264 13-60 (66)
35 2e6r_A Jumonji/ARID domain-con 99.0 4.3E-11 1.5E-15 89.9 1.5 48 213-263 15-66 (92)
36 1fp0_A KAP-1 corepressor; PHD 98.9 9.5E-10 3.2E-14 81.5 5.4 47 213-264 24-73 (88)
37 2yt5_A Metal-response element- 98.9 2.6E-10 9E-15 80.2 2.3 52 211-265 3-63 (66)
38 3asl_A E3 ubiquitin-protein li 98.9 7.3E-10 2.5E-14 79.0 3.3 43 218-263 23-69 (70)
39 2e6s_A E3 ubiquitin-protein li 98.8 1.7E-09 6E-14 78.4 3.8 44 216-262 28-76 (77)
40 1wev_A Riken cDNA 1110020M19; 98.7 8.8E-10 3E-14 82.0 -0.3 50 213-265 15-74 (88)
41 3shb_A E3 ubiquitin-protein li 98.7 9.9E-09 3.4E-13 74.4 3.0 43 218-263 31-77 (77)
42 2kwj_A Zinc finger protein DPF 98.7 2.5E-09 8.6E-14 83.3 -0.2 47 216-265 60-110 (114)
43 3ask_A E3 ubiquitin-protein li 98.6 1.7E-08 5.8E-13 87.1 2.4 45 216-263 176-225 (226)
44 3pur_A Lysine-specific demethy 98.5 1.7E-08 5.8E-13 96.6 1.5 35 225-262 56-93 (528)
45 3v43_A Histone acetyltransfera 98.5 5.7E-08 2E-12 75.3 3.8 44 216-262 63-111 (112)
46 2ysm_A Myeloid/lymphoid or mix 98.3 1.7E-07 5.8E-12 72.4 1.8 45 216-263 56-104 (111)
47 2lbm_A Transcriptional regulat 98.0 1.1E-06 3.8E-11 70.7 1.6 45 214-263 63-117 (142)
48 3ql9_A Transcriptional regulat 97.9 1.3E-06 4.4E-11 69.2 0.0 46 213-263 56-111 (129)
49 2ysm_A Myeloid/lymphoid or mix 97.9 7.1E-06 2.4E-10 63.1 4.1 45 214-261 7-55 (111)
50 2kwj_A Zinc finger protein DPF 97.8 4.2E-06 1.4E-10 64.9 0.3 44 215-261 2-59 (114)
51 3v43_A Histone acetyltransfera 97.7 5.3E-06 1.8E-10 64.1 0.5 44 215-261 6-62 (112)
52 4bbq_A Lysine-specific demethy 97.1 0.00024 8.2E-09 54.8 3.0 38 225-265 73-116 (117)
53 2xzr_A Immunoglobulin-binding 95.3 0.45 1.5E-05 35.1 11.7 87 5-91 7-95 (114)
54 1wil_A KIAA1045 protein; ring 95.1 0.017 5.9E-07 41.8 3.4 45 214-261 15-74 (89)
55 3a1b_A DNA (cytosine-5)-methyl 94.3 0.013 4.4E-07 47.6 1.4 49 213-264 78-135 (159)
56 2pv0_B DNA (cytosine-5)-methyl 94.1 0.016 5.6E-07 53.5 1.7 48 213-263 92-148 (386)
57 3ghg_A Fibrinogen alpha chain; 90.4 6.2 0.00021 37.6 14.1 54 62-115 106-159 (562)
58 1vyx_A ORF K3, K3RING; zinc-bi 88.7 0.067 2.3E-06 36.1 -0.5 51 212-264 4-57 (60)
59 2lq6_A Bromodomain-containing 87.4 0.21 7.2E-06 36.3 1.5 32 214-246 17-49 (87)
60 2d8s_A Cellular modulator of i 87.0 0.25 8.7E-06 35.2 1.7 48 214-263 15-67 (80)
61 1m1j_C Fibrinogen gamma chain; 86.9 10 0.00035 35.1 13.0 34 6-39 25-59 (409)
62 2ysl_A Tripartite motif-contai 83.1 1.6 5.5E-05 29.4 4.4 48 212-264 18-67 (73)
63 3kv4_A PHD finger protein 8; e 82.7 0.062 2.1E-06 50.7 -4.1 11 224-234 17-27 (447)
64 2ke4_A CDC42-interacting prote 79.9 8.4 0.00029 28.4 7.5 81 12-112 7-87 (98)
65 1m1j_A Fibrinogen alpha subuni 77.9 45 0.0016 31.2 13.3 53 64-116 109-161 (491)
66 2qyw_A Vesicle transport throu 75.3 22 0.00075 26.1 11.3 83 25-110 15-101 (102)
67 2kiz_A E3 ubiquitin-protein li 74.5 1.6 5.4E-05 29.2 2.1 46 213-263 13-60 (69)
68 3lhp_S 4E10_D0_1ISEA_004_N (T9 74.4 4.3 0.00015 31.2 4.7 33 79-111 89-121 (123)
69 2ect_A Ring finger protein 126 73.4 3.1 0.00011 28.4 3.5 46 213-263 14-61 (78)
70 2ct2_A Tripartite motif protei 73.1 1.5 5.1E-05 30.7 1.8 48 212-263 13-65 (88)
71 1deq_A Fibrinogen (alpha chain 73.0 52 0.0018 30.0 12.1 25 21-45 98-122 (390)
72 3sjb_C Golgi to ER traffic pro 71.6 19 0.00066 26.2 7.4 35 2-40 4-38 (93)
73 2yur_A Retinoblastoma-binding 70.6 1.3 4.5E-05 30.3 1.0 47 213-263 14-61 (74)
74 2ep4_A Ring finger protein 24; 70.2 2.6 9E-05 28.5 2.4 45 214-263 15-61 (74)
75 2ysj_A Tripartite motif-contai 70.2 2.4 8.4E-05 27.7 2.2 44 212-260 18-63 (63)
76 2ecv_A Tripartite motif-contai 69.8 2.3 8E-05 29.2 2.2 47 212-263 17-68 (85)
77 3ghg_B Fibrinogen beta chain; 69.1 40 0.0014 31.6 10.8 32 78-109 161-192 (461)
78 2ecj_A Tripartite motif-contai 69.1 4 0.00014 25.9 3.1 42 213-260 14-58 (58)
79 2d8t_A Dactylidin, ring finger 68.9 3.5 0.00012 27.8 2.8 43 214-263 15-58 (71)
80 2qyw_A Vesicle transport throu 68.8 32 0.0011 25.2 9.1 74 3-76 14-96 (102)
81 1weq_A PHD finger protein 7; s 66.5 6.1 0.00021 28.4 3.8 46 214-262 26-78 (85)
82 2ecw_A Tripartite motif-contai 65.8 6.6 0.00023 26.8 3.9 47 213-264 18-69 (85)
83 3ghg_A Fibrinogen alpha chain; 65.4 18 0.00063 34.4 7.8 25 80-104 131-155 (562)
84 1x4j_A Ring finger protein 38; 65.0 1.8 6.1E-05 29.6 0.7 46 213-263 22-69 (75)
85 1nfn_A Apolipoprotein E3; lipi 65.0 55 0.0019 26.7 10.0 48 3-50 30-80 (191)
86 2csy_A Zinc finger protein 183 64.9 3 0.0001 28.8 1.9 45 212-263 13-58 (81)
87 4gne_A Histone-lysine N-methyl 63.6 4.4 0.00015 30.4 2.7 44 211-257 50-98 (107)
88 2ecy_A TNF receptor-associated 63.5 3.4 0.00012 27.3 1.9 46 212-264 13-60 (66)
89 2ct0_A Non-SMC element 1 homol 63.3 5.8 0.0002 27.6 3.1 46 214-263 15-61 (74)
90 4fla_A Regulation of nuclear P 63.2 31 0.0011 27.4 7.8 95 10-107 45-141 (152)
91 2egp_A Tripartite motif-contai 62.9 5.5 0.00019 27.0 3.0 47 213-264 11-63 (79)
92 2ea6_A Ring finger protein 4; 62.3 5.4 0.00019 26.2 2.8 49 213-266 14-68 (69)
93 2zdi_C Prefoldin subunit alpha 61.8 54 0.0019 25.4 9.7 101 13-113 4-138 (151)
94 2l0b_A E3 ubiquitin-protein li 61.5 3.8 0.00013 29.2 1.9 46 213-263 39-86 (91)
95 3umh_A Amyloid beta A4 protein 60.4 37 0.0013 28.5 8.0 98 5-107 104-209 (211)
96 4gfq_A Ribosome-recycling fact 59.4 33 0.0011 28.7 7.6 33 79-111 175-207 (209)
97 1m1j_C Fibrinogen gamma chain; 59.4 14 0.00047 34.3 5.7 27 80-106 105-131 (409)
98 2lk0_A RNA-binding protein 5; 59.3 3.5 0.00012 24.0 1.1 11 252-262 3-13 (32)
99 3k1l_B Fancl; UBC, ring, RWD, 59.3 6 0.00021 36.1 3.2 50 213-263 307-370 (381)
100 2ecm_A Ring finger and CHY zin 58.7 4 0.00014 25.7 1.5 44 215-263 6-52 (55)
101 1iym_A EL5; ring-H2 finger, ub 58.5 5.3 0.00018 25.1 2.1 44 215-263 6-52 (55)
102 1v87_A Deltex protein 2; ring- 58.0 3.7 0.00013 30.3 1.4 26 238-263 63-91 (114)
103 1gs9_A Apolipoprotein E, APOE4 57.2 72 0.0025 25.4 11.6 55 4-58 31-88 (165)
104 3nw0_A Non-structural maintena 56.7 4.2 0.00014 34.8 1.7 45 214-262 180-225 (238)
105 1m1j_B Fibrinogen beta chain; 56.1 1.3E+02 0.0045 28.1 13.9 8 238-245 405-412 (464)
106 1dd5_A Ribosome recycling fact 55.9 43 0.0015 27.5 7.6 33 79-111 151-183 (185)
107 1m1j_A Fibrinogen alpha subuni 55.8 1.3E+02 0.0046 28.1 13.5 18 87-104 139-156 (491)
108 1ise_A Ribosome recycling fact 55.3 47 0.0016 27.2 7.8 33 79-111 151-183 (185)
109 1eh1_A Ribosome recycling fact 54.4 45 0.0015 27.3 7.5 32 79-110 152-183 (185)
110 3oja_B Anopheles plasmodium-re 54.2 1.4E+02 0.0049 27.9 13.0 7 25-31 463-469 (597)
111 1wqg_A Ribosome recycling fact 53.8 45 0.0015 27.3 7.4 33 79-111 151-183 (185)
112 1vcs_A Vesicle transport throu 52.2 51 0.0017 24.1 6.9 78 31-112 11-92 (102)
113 1x64_A Alpha-actinin-2 associa 51.9 18 0.00061 25.3 4.2 43 214-261 25-79 (89)
114 1is1_A Ribosome recycling fact 51.8 44 0.0015 27.3 7.1 33 79-111 151-183 (185)
115 1bor_A Transcription factor PM 51.5 14 0.00048 23.5 3.3 41 212-263 4-46 (56)
116 2k1p_A Zinc finger RAN-binding 51.4 4.6 0.00016 23.6 0.7 11 252-262 4-14 (33)
117 1jm7_A BRCA1, breast cancer ty 51.0 4.3 0.00015 29.6 0.7 44 215-263 22-67 (112)
118 2yf2_A C4B binding protein; im 50.9 49 0.0017 21.6 5.7 37 15-51 24-60 (65)
119 2v71_A Nuclear distribution pr 49.8 1.1E+02 0.0036 25.2 13.2 37 7-43 20-56 (189)
120 2wuj_A Septum site-determining 49.6 18 0.00061 23.7 3.6 29 6-37 25-53 (57)
121 3mq9_A Bone marrow stromal ant 49.0 1.6E+02 0.0053 26.8 15.2 34 78-111 434-467 (471)
122 2yuu_A NPKC-delta, protein kin 48.6 11 0.00038 26.5 2.6 33 212-247 26-62 (83)
123 3lf9_A 4E10_D0_1IS1A_001_C (T1 47.2 22 0.00077 27.1 4.2 34 79-112 79-112 (121)
124 2enn_A NPKC-theta, protein kin 47.2 10 0.00034 26.4 2.1 33 212-247 32-68 (77)
125 2hzl_A Trap-T family sorbitol/ 47.0 1.2E+02 0.0043 26.5 10.0 85 11-99 252-341 (365)
126 2d8v_A Zinc finger FYVE domain 46.8 6.2 0.00021 27.0 0.9 19 213-234 8-26 (67)
127 3nmd_A CGMP dependent protein 46.2 71 0.0024 22.1 7.1 41 71-111 24-64 (72)
128 2enz_A NPKC-theta, protein kin 45.7 15 0.00052 24.4 2.8 33 212-247 21-57 (65)
129 3na7_A HP0958; flagellar bioge 45.6 1.4E+02 0.0047 25.2 10.6 111 1-112 2-115 (256)
130 2eli_A Protein kinase C alpha 43.8 17 0.00059 25.6 3.0 33 212-247 26-62 (85)
131 2ecn_A Ring finger protein 141 43.6 5.8 0.0002 26.3 0.4 43 213-263 14-57 (70)
132 1t1h_A Gspef-atpub14, armadill 43.0 8 0.00027 26.2 1.1 45 213-263 7-52 (78)
133 2ecl_A Ring-box protein 2; RNF 42.6 20 0.00069 24.7 3.2 22 238-263 50-73 (81)
134 3ztg_A E3 ubiquitin-protein li 42.5 6.2 0.00021 27.8 0.4 47 212-263 11-59 (92)
135 1faq_A RAF-1; transferase, ser 42.3 12 0.00042 23.5 1.8 31 213-247 13-44 (52)
136 2dj7_A Actin-binding LIM prote 42.0 36 0.0012 23.3 4.5 44 213-261 14-69 (80)
137 1wig_A KIAA1808 protein; LIM d 41.9 18 0.00062 24.3 2.8 42 216-262 7-61 (73)
138 1ptq_A Protein kinase C delta 41.8 11 0.00038 23.4 1.5 32 213-247 10-45 (50)
139 3l11_A E3 ubiquitin-protein li 38.9 13 0.00043 27.4 1.7 44 214-263 15-59 (115)
140 2ckl_B Ubiquitin ligase protei 38.8 8.4 0.00029 30.4 0.7 46 213-263 53-99 (165)
141 3ghg_C Fibrinogen gamma chain; 37.7 2.4E+02 0.0083 25.9 15.1 37 72-108 97-133 (411)
142 2co8_A NEDD9 interacting prote 37.6 71 0.0024 21.7 5.5 45 214-263 15-74 (82)
143 3dpl_R Ring-box protein 1; ubi 37.2 12 0.0004 27.7 1.2 22 238-263 75-98 (106)
144 4dac_A Computationally designe 36.9 43 0.0015 18.2 3.1 19 91-109 5-23 (28)
145 2zzv_A ABC transporter, solute 36.9 2.1E+02 0.0073 24.9 10.8 43 11-53 259-302 (361)
146 3lrq_A E3 ubiquitin-protein li 36.4 8.9 0.0003 27.7 0.4 43 214-263 22-67 (100)
147 1fxk_C Protein (prefoldin); ar 36.0 1.2E+02 0.0042 22.7 7.1 104 6-113 3-128 (133)
148 3onj_A T-snare VTI1; helix, HA 35.9 99 0.0034 22.2 6.2 80 29-112 5-91 (97)
149 1v5n_A PDI-like hypothetical p 35.4 12 0.00041 26.9 1.0 32 215-249 48-80 (89)
150 4a0k_B E3 ubiquitin-protein li 35.4 10 0.00034 28.8 0.6 24 238-263 86-109 (117)
151 2l7p_A Histone-lysine N-methyl 34.9 9.9 0.00034 28.2 0.5 32 224-259 25-58 (100)
152 1vcs_A Vesicle transport throu 34.9 75 0.0026 23.1 5.4 69 6-74 7-83 (102)
153 2lh0_A Histone chaperone RTT10 34.9 17 0.00059 25.0 1.7 30 13-42 9-38 (70)
154 1m1j_B Fibrinogen beta chain; 34.5 2.9E+02 0.0099 25.8 15.2 16 96-111 177-192 (464)
155 4ayc_A E3 ubiquitin-protein li 34.2 13 0.00045 28.4 1.1 40 216-263 55-96 (138)
156 2e61_A Zinc finger CW-type PWW 34.1 24 0.00084 24.1 2.4 33 225-259 16-49 (69)
157 1x62_A C-terminal LIM domain p 33.9 20 0.00069 24.4 2.0 43 214-261 15-69 (79)
158 2djb_A Polycomb group ring fin 33.8 20 0.00068 23.8 1.9 46 213-264 14-60 (72)
159 2yo3_A General control protein 33.4 1.7E+02 0.0059 25.3 8.1 48 64-111 200-247 (268)
160 2jwo_A RAG-2, V(D)J recombinat 33.1 11 0.00038 26.4 0.4 31 227-259 38-75 (82)
161 3pmr_A Amyloid-like protein 1; 32.8 1.5E+02 0.0051 24.9 7.5 93 5-102 111-211 (219)
162 2dq0_A Seryl-tRNA synthetase; 32.8 2.2E+02 0.0075 26.3 9.5 22 92-113 81-102 (455)
163 3oja_A Leucine-rich immune mol 32.6 2.9E+02 0.0098 25.1 11.4 19 68-86 466-484 (487)
164 3onj_A T-snare VTI1; helix, HA 32.5 1.4E+02 0.0047 21.4 12.3 26 5-30 2-27 (97)
165 3fs3_A Nucleosome assembly pro 32.1 59 0.002 29.5 5.2 34 9-42 40-73 (359)
166 3mq9_A Bone marrow stromal ant 32.1 2.7E+02 0.0092 25.2 10.0 27 85-111 427-460 (471)
167 1y8f_A UNC-13 homolog A, MUNC1 32.0 14 0.00048 24.7 0.8 33 212-247 22-58 (66)
168 3l39_A Putative PHOU-like phos 31.8 1E+02 0.0036 25.4 6.5 43 3-47 43-85 (227)
169 2dfs_A Myosin-5A; myosin-V, in 31.5 4.6E+02 0.016 27.1 13.2 21 72-92 1023-1043(1080)
170 3qne_A Seryl-tRNA synthetase, 30.7 2.9E+02 0.0097 25.9 9.9 22 92-113 83-104 (485)
171 2vpn_A Periplasmic substrate b 30.6 2.4E+02 0.0081 24.1 9.0 39 11-49 218-257 (316)
172 2l5g_B Putative uncharacterize 29.8 76 0.0026 19.5 3.8 11 96-106 11-21 (42)
173 2d8x_A Protein pinch; LIM doma 29.8 31 0.0011 22.6 2.3 42 215-261 6-59 (70)
174 3ag7_A Putative uncharacterize 29.6 1.6E+02 0.0056 21.4 6.9 26 25-50 6-31 (106)
175 3u65_B TP33 protein; tetratric 29.2 2E+02 0.0067 25.1 8.2 62 11-72 235-301 (328)
176 3ng2_A RNF4, snurf, ring finge 29.1 26 0.00088 22.9 1.8 45 213-264 9-61 (71)
177 1chc_A Equine herpes virus-1 r 28.9 19 0.00065 23.4 1.1 44 214-263 5-49 (68)
178 1x68_A FHL5 protein; four-and- 28.9 55 0.0019 21.8 3.6 43 216-263 7-65 (76)
179 3uej_A NPKC-delta, protein kin 28.6 19 0.00064 23.9 1.0 32 213-247 19-54 (65)
180 6rxn_A Rubredoxin; electron tr 28.3 44 0.0015 21.0 2.6 13 252-264 28-40 (46)
181 2ld6_A Chemotaxis protein CHEA 28.2 1.6E+02 0.0054 22.3 6.6 71 1-72 1-71 (139)
182 2dfs_A Myosin-5A; myosin-V, in 28.1 5.2E+02 0.018 26.7 13.5 21 80-100 1023-1043(1080)
183 1nyp_A Pinch protein; LIM doma 28.1 21 0.00073 23.2 1.2 42 215-261 6-59 (66)
184 3ghg_B Fibrinogen beta chain; 27.8 3.3E+02 0.011 25.4 9.6 45 68-113 143-189 (461)
185 2db6_A SH3 and cysteine rich d 27.8 14 0.00047 25.4 0.2 33 212-247 26-62 (74)
186 4g2k_A General control protein 27.3 1.9E+02 0.0063 22.0 6.4 44 6-49 23-66 (125)
187 2bzb_A Conserved domain protei 27.3 1.1E+02 0.0038 20.3 4.7 45 7-51 4-48 (62)
188 1yke_B RNA polymerase II holoe 27.1 2.3E+02 0.0077 22.2 11.2 52 43-94 71-124 (151)
189 1e4u_A Transcriptional repress 27.1 62 0.0021 22.2 3.6 46 213-264 10-60 (78)
190 2l5g_A GPS2 protein, G protein 27.0 1.1E+02 0.0036 18.4 4.0 24 62-85 12-35 (38)
191 1nkp_A C-MYC, MYC proto-oncoge 26.8 1.4E+02 0.0049 21.0 5.6 38 5-42 46-83 (88)
192 3u50_C Telomerase-associated p 26.8 18 0.00062 29.3 0.7 14 250-263 55-68 (172)
193 3fxb_A Trap dicarboxylate tran 25.9 3.2E+02 0.011 23.5 10.0 17 11-27 232-248 (326)
194 2kn9_A Rubredoxin; metalloprot 25.7 47 0.0016 23.5 2.7 12 252-263 58-69 (81)
195 2dmj_A Poly (ADP-ribose) polym 25.7 14 0.00047 27.5 -0.1 9 238-246 57-65 (106)
196 2dar_A PDZ and LIM domain prot 25.6 40 0.0014 23.4 2.4 43 214-261 25-79 (90)
197 3lbx_A Spectrin alpha chain, e 25.6 1.4E+02 0.0048 23.1 5.9 23 61-83 133-155 (161)
198 3fl2_A E3 ubiquitin-protein li 25.5 12 0.00041 27.9 -0.5 44 215-264 53-97 (124)
199 1dx8_A Rubredoxin; electron tr 25.4 52 0.0018 22.5 2.8 13 252-264 38-50 (70)
200 2ehe_A Four and A half LIM dom 25.4 73 0.0025 21.4 3.7 43 216-263 17-73 (82)
201 2d8y_A Eplin protein; LIM doma 25.0 53 0.0018 22.8 3.0 42 214-260 15-69 (91)
202 2cu8_A Cysteine-rich protein 2 24.8 51 0.0017 22.0 2.7 42 215-261 10-65 (76)
203 2vrw_B P95VAV, VAV1, proto-onc 24.5 34 0.0012 30.8 2.3 34 211-247 354-391 (406)
204 4b2u_A S67; toxin, ICK; NMR {S 24.5 13 0.00045 21.4 -0.3 14 252-265 16-29 (36)
205 2cur_A Skeletal muscle LIM-pro 24.1 29 0.001 22.7 1.3 41 216-261 7-59 (69)
206 3agt_A Hemerythrin-like domain 24.1 2.2E+02 0.0076 21.1 8.2 44 64-107 86-130 (136)
207 1uw0_A DNA ligase III; DNA rep 23.9 12 0.00042 28.3 -0.7 9 238-246 49-57 (117)
208 1wyh_A SLIM 2, skeletal muscle 23.8 50 0.0017 21.6 2.5 42 215-261 6-61 (72)
209 1s24_A Rubredoxin 2; electron 23.7 53 0.0018 23.6 2.7 12 252-263 66-77 (87)
210 2xzr_A Immunoglobulin-binding 23.6 2.2E+02 0.0074 20.8 12.7 93 18-111 13-107 (114)
211 1zxa_A CGMP-dependent protein 23.4 74 0.0025 21.7 3.2 22 25-46 32-53 (67)
212 4e61_A Protein BIM1; EB1-like 23.3 2.3E+02 0.0078 21.0 9.7 54 12-77 5-61 (106)
213 2ckl_A Polycomb group ring fin 23.3 24 0.00082 25.5 0.8 44 214-263 15-59 (108)
214 1ykh_B RNA polymerase II holoe 23.3 2.5E+02 0.0085 21.3 11.2 55 43-97 71-127 (132)
215 2v3b_B Rubredoxin 2, rubredoxi 23.2 60 0.0021 21.0 2.7 13 252-264 34-46 (55)
216 2v71_A Nuclear distribution pr 23.2 3.1E+02 0.01 22.4 15.8 96 6-109 33-138 (189)
217 1z6u_A NP95-like ring finger p 23.2 20 0.0007 27.9 0.4 44 214-263 78-122 (150)
218 2zqm_A Prefoldin beta subunit 23.1 2.1E+02 0.0073 20.5 13.2 98 15-114 3-111 (117)
219 1yuz_A Nigerythrin; rubrythrin 23.1 37 0.0013 28.0 2.0 10 255-264 187-196 (202)
220 1n0z_A ZNF265; zinc finger, RN 23.1 25 0.00087 21.9 0.8 11 252-262 12-24 (45)
221 2a20_A Regulating synaptic mem 22.8 27 0.00093 23.3 0.9 47 214-263 9-60 (62)
222 2ko5_A Ring finger protein Z; 22.6 1.1E+02 0.0038 22.3 4.2 47 211-264 25-71 (99)
223 3lt7_A Adhesin YADA; adhesion, 22.6 1.8E+02 0.0062 19.5 7.3 44 70-113 5-53 (64)
224 1v9x_A Poly (ADP-ribose) polym 22.4 15 0.00051 27.8 -0.5 10 238-247 52-61 (114)
225 2d8z_A Four and A half LIM dom 22.4 41 0.0014 21.9 1.8 41 216-261 7-59 (70)
226 2ayu_A Nucleosome assembly pro 22.1 1.7E+02 0.0058 26.9 6.5 34 10-43 82-115 (417)
227 4rxn_A Rubredoxin; electron tr 21.6 33 0.0011 22.3 1.1 12 252-263 34-45 (54)
228 1nkp_B MAX protein, MYC proto- 21.5 1.6E+02 0.0053 20.3 4.9 16 6-21 42-57 (83)
229 2rpa_A Katanin P60 ATPase-cont 21.4 2.1E+02 0.0072 19.8 6.5 56 20-78 18-76 (78)
230 1ez3_A Syntaxin-1A; three heli 21.3 2.4E+02 0.0083 20.5 15.7 33 4-36 5-37 (127)
231 2ynq_A ESSB; membrane protein, 21.2 2.9E+02 0.0099 22.0 6.8 33 48-80 115-147 (161)
232 2cs2_A Poly [ADP-ribose] polym 21.2 15 0.00053 28.5 -0.7 9 238-246 61-69 (134)
233 1fxk_A Prefoldin; archaeal pro 21.1 2.2E+02 0.0077 20.0 6.2 38 74-111 66-103 (107)
234 3fx7_A Putative uncharacterize 21.0 2.4E+02 0.0082 20.4 10.9 26 17-42 8-33 (94)
235 2yy0_A C-MYC-binding protein; 20.9 1.7E+02 0.0059 18.7 5.2 45 4-48 5-49 (53)
236 2fup_A Hypothetical protein PA 20.9 2.7E+02 0.0093 20.9 8.6 8 93-100 117-124 (157)
237 3mtu_A Tropomyosin alpha-1 cha 20.8 85 0.0029 21.6 3.2 33 5-37 17-49 (75)
238 3vkg_A Dynein heavy chain, cyt 20.5 1.1E+03 0.037 27.8 14.0 36 6-41 1929-1964(3245)
239 1e8j_A Rubredoxin; iron-sulfur 20.3 39 0.0013 21.7 1.3 13 252-264 34-46 (52)
240 2fnf_X Putative RAS effector N 20.3 62 0.0021 22.0 2.4 33 212-247 33-66 (72)
241 1gqe_A Release factor 2, RF2; 20.2 4.8E+02 0.016 23.5 9.0 22 88-109 95-116 (365)
242 1tt9_A Formimidoyltransferase- 20.2 5.6E+02 0.019 24.3 12.1 77 18-94 389-467 (541)
243 1l1o_C Replication protein A 7 20.2 34 0.0011 27.6 1.2 13 251-263 59-71 (181)
244 2d9g_A YY1-associated factor 2 20.2 51 0.0018 21.2 1.8 13 251-263 8-20 (53)
No 1
>4afl_A P29ING4, inhibitor of growth protein 4; cell cycle, tumour suppressor, chromatin remodelling; 2.28A {Homo sapiens}
Probab=99.97 E-value=2.3e-30 Score=200.31 Aligned_cols=103 Identities=56% Similarity=0.911 Sum_probs=100.0
Q ss_pred hhhHHHHHHHHhhcchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhHHHH
Q psy12696 2 STSYLEQYLDSLDSLPIELQRNFTLMRELDSRAQDVMKTIDRVAEDYLDNMKHYSKDKKKETLAEIQKYFDKTKEYGDDK 81 (267)
Q Consensus 2 ~~~yLedfld~ie~LP~El~r~l~~irelD~~~~~~~~~i~~~~~~~~k~~~~~~~~~~~~~~~~I~~~~~~~~~lsdEK 81 (267)
+++|||+|+++|+|||.||+|+|++||+||.++++++.++++.+++|+++.++++++++...+.+|++.|.++++++|||
T Consensus 2 ~~~yledyld~ie~LP~El~r~~~~irelD~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~l~~I~~~~~~~~~l~dEK 81 (104)
T 4afl_A 2 AGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLALLKQIQEAYGKCKEFGDDK 81 (104)
T ss_dssp CCHHHHHHHHSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 82 VQLAIQTYEMVDKYIRKLDTDLA 104 (267)
Q Consensus 82 v~LA~~a~dlVd~hirrLD~dl~ 104 (267)
|+||++||++||+|++|||.||+
T Consensus 82 v~lA~~~~dlvdkhirrLD~dla 104 (104)
T 4afl_A 82 VQLAMQTYEMVDKHIRRLDTDLA 104 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHhhhcC
Confidence 99999999999999999999874
No 2
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.89 E-value=1.6e-23 Score=157.15 Aligned_cols=71 Identities=72% Similarity=1.524 Sum_probs=64.1
Q ss_pred CCCCCCCCCCCCCCCCCCceeecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCcccCC
Q psy12696 197 VAAPSHDVLDMPVDPNEPTYCVCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSDRKKK 267 (267)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~C~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~~~~~ 267 (267)
+...++.+.++++|+++.+||+|+++++|+||+||+|+|+++|||+.||||+..|.++||||.|...++++
T Consensus 19 ~~~~p~~~~~~~~d~~e~~yCiC~~~~~g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~~~k~ 89 (91)
T 1weu_A 19 GSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQESGPS 89 (91)
T ss_dssp CCCCCCCCCSCCCCSCCCBCSTTCCBCCSCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCCCSSS
T ss_pred cccCccccccCCcCCCCCcEEECCCCCCCCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCcCCcC
Confidence 34566677788999999999999999999999999999999999999999999999999999999887653
No 3
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=99.88 E-value=4.2e-23 Score=148.50 Aligned_cols=66 Identities=73% Similarity=1.561 Sum_probs=59.9
Q ss_pred CCCCCCCCCCCCCceeecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCcccCC
Q psy12696 202 HDVLDMPVDPNEPTYCVCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSDRKKK 267 (267)
Q Consensus 202 ~~~~~~~~~~~~~~~C~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~~~~~ 267 (267)
+.+.+.++|+++.+||+|+++++|+||+||+|+|+++|||+.||||+..|.++||||.|...++||
T Consensus 4 ~~~~~~~~d~~~~~~C~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~~~~~k~ 69 (71)
T 1wen_A 4 GSSGDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQESGPS 69 (71)
T ss_dssp CCSSCCCCCTTSCCCSTTCCCSCSSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTSSCSSSC
T ss_pred ccccccccCCCCCCEEECCCCCCCCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCCcccccc
Confidence 345577889999999999999999999999999998999999999999999999999999887654
No 4
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=99.86 E-value=2.4e-23 Score=145.87 Aligned_cols=60 Identities=77% Similarity=1.675 Sum_probs=49.8
Q ss_pred CCCCCCCCCceeecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCccc
Q psy12696 206 DMPVDPNEPTYCVCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSDRK 265 (267)
Q Consensus 206 ~~~~~~~~~~~C~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~~~ 265 (267)
++++|+++++||+|+++++|+||+||+|+|+++|||+.||||+..|.++||||.|..+++
T Consensus 3 ~~~~d~~e~~yC~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~r~ 62 (62)
T 2g6q_A 3 EFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGDNE 62 (62)
T ss_dssp -------CCEETTTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHTCC-
T ss_pred ccccCCCCCcEEECCCCCCCCeeeeeCCCCCcccEecccCCcCcCCCCCEECcCcccCCC
Confidence 567889999999999999999999999999999999999999999999999999987654
No 5
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=99.83 E-value=2.8e-22 Score=139.15 Aligned_cols=56 Identities=79% Similarity=1.706 Sum_probs=48.7
Q ss_pred CCCCCCCceeecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 208 PVDPNEPTYCVCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 208 ~~~~~~~~~C~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
++|+++++||+|+++++|+||+||+|+|+++|||+.||||+..|.++||||.|..+
T Consensus 3 ~~d~~e~~yC~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 3 CRGSNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp -----CCEETTTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHCC
T ss_pred ccCCCCCcEEECCCCCCCCeeEeeCCCCCCCCEecccCCcccCCCCCEECcCccCc
Confidence 46889999999999999999999999999899999999999999999999999764
No 6
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=99.83 E-value=4.2e-22 Score=138.77 Aligned_cols=58 Identities=83% Similarity=1.823 Sum_probs=48.3
Q ss_pred CCCCCCCCCceeecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 206 DMPVDPNEPTYCVCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 206 ~~~~~~~~~~~C~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
+.++|+++.+||+|+++++|+||+||+|+|+++|||+.||||+..|.|+||||.|..+
T Consensus 2 ~~~~d~~e~~~C~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 2 DMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp -------CCEETTTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC-
T ss_pred CcccCCCCCCEEECCCcCCCCEEEeCCCCCCCceEehhcCCCCcCCCCCEECcCccCc
Confidence 4677899999999999999999999999999899999999999999999999999764
No 7
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=99.82 E-value=9.7e-22 Score=147.16 Aligned_cols=56 Identities=55% Similarity=1.379 Sum_probs=48.8
Q ss_pred CCCCCCCCceeecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcC-CcC
Q psy12696 207 MPVDPNEPTYCVCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPK-CTS 262 (267)
Q Consensus 207 ~~~~~~~~~~C~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~-C~~ 262 (267)
.++++++.+||+|+++++|+||+||+|+|+++|||+.||||+..|.+.||||. |..
T Consensus 19 ~~~~~~~~~yCiC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 19 EGNNNQEEVYCFCRNVSYGPMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp -----CCSCCSTTTCCCSSSEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHHH
T ss_pred CCCCCCCCcEEEeCCCCCCCEEEecCCCCccccCcCccCCCCcCCCCCccCChhhcc
Confidence 34577889999999999999999999999999999999999999999999999 863
No 8
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=5.7e-22 Score=142.18 Aligned_cols=55 Identities=65% Similarity=1.557 Sum_probs=51.1
Q ss_pred CCCCCceeecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCcc
Q psy12696 210 DPNEPTYCVCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSDR 264 (267)
Q Consensus 210 ~~~~~~~C~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~~ 264 (267)
++++++||+|+++++|+||+||+|+||.+|||+.||||+..|.+.||||.|....
T Consensus 2 ~~~~~~yC~C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~~ 56 (70)
T 1x4i_A 2 SSGSSGYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTAAM 56 (70)
T ss_dssp CCSCCCCSTTSCCCCSSEECCSCTTCSCCCEEHHHHTCSSCCSSCCCCHHHHHHH
T ss_pred CCCCCeEEEcCCCCCCCEeEeCCCCCCccCCcccccccCcCCCCCEECCCCCccc
Confidence 4678999999999999999999999999999999999999999999999997543
No 9
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.69 E-value=5e-18 Score=124.27 Aligned_cols=63 Identities=32% Similarity=0.780 Sum_probs=52.4
Q ss_pred CCCCCCCCCCCCceeecCCC-CCCCcccccCCCCCCcceecccCccCCCC-------CCceeCcCCcCcccC
Q psy12696 203 DVLDMPVDPNEPTYCVCQQV-SYGEMIGCDNPDCPIEWFHFACVSLTTKP-------KGKWYCPKCTSDRKK 266 (267)
Q Consensus 203 ~~~~~~~~~~~~~~C~C~~~-~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p-------~~~w~C~~C~~~~~~ 266 (267)
+..+.++++++.+||+|+++ ++|.||+|||..|+. |||+.||||+..+ .+.|||+.|...+++
T Consensus 5 ~~~dd~~~~~~~~~CiC~~~~~~g~MI~CD~~~C~~-W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~~ 75 (78)
T 1wew_A 5 SSGEDPFQPEIKVRCVCGNSLETDSMIQCEDPRCHV-WQHVGCVILPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp CCCCCSSSCCCCCCCSSCCCCCCSCEEECSSTTTCC-EEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred cccccccCCCCCEEeECCCcCCCCCEEEECCccCCc-cccCEEEccccccccccccCCCCEECCCCCcccCC
Confidence 34467788899999999999 679999999544665 9999999998876 369999999877664
No 10
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=99.52 E-value=1.5e-15 Score=108.07 Aligned_cols=57 Identities=30% Similarity=0.804 Sum_probs=45.8
Q ss_pred CCCCCCCCceeecCCC-CCCCcccccCCCCCCcceecccCccCCCCC------CceeCcCCcCcc
Q psy12696 207 MPVDPNEPTYCVCQQV-SYGEMIGCDNPDCPIEWFHFACVSLTTKPK------GKWYCPKCTSDR 264 (267)
Q Consensus 207 ~~~~~~~~~~C~C~~~-~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~------~~w~C~~C~~~~ 264 (267)
.+.++++.+||+|+.+ ++|.||+||+..|. .|||+.||||+..|. +.|||+.|+..+
T Consensus 3 d~~~~e~~v~C~C~~~~~~g~mI~CD~~~C~-~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~r 66 (68)
T 2rsd_A 3 DSFQPEAKVRCICSSTMVNDSMIQCEDQRCQ-VWQHLNCVLIPDKPGESAEVPPVFYCELCRLSR 66 (68)
T ss_dssp SCCCSSCEECCTTCCCSCCSCEEECSCTTTC-EEEETTTSCCCSSTTSCCCCCSSCCCHHHHHHH
T ss_pred CCcCCCCCEEeECCCCcCCCCEEEECCCCCC-CeEchhhCCCCcccccccCCCCcEECcCccCcc
Confidence 4567888999999887 56899999974454 799999999987652 479999997654
No 11
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=99.51 E-value=3.6e-15 Score=106.07 Aligned_cols=52 Identities=23% Similarity=0.623 Sum_probs=44.7
Q ss_pred CCCCCCceeecCCCCCC-CcccccCCCCCCcceecccCccCCCC-CCceeCcCCcCc
Q psy12696 209 VDPNEPTYCVCQQVSYG-EMIGCDNPDCPIEWFHFACVSLTTKP-KGKWYCPKCTSD 263 (267)
Q Consensus 209 ~~~~~~~~C~C~~~~~~-~mi~Cd~~~c~~~wfH~~Cv~l~~~p-~~~w~C~~C~~~ 263 (267)
.++.+.+||+|+++.++ .||+||.|+ +|||+.|||++..+ .+.|+|+.|...
T Consensus 14 ~~~~~~~~CiC~~~~~~~~MIqCd~C~---~WfH~~Cvgi~~~~~~~~~~C~~C~~s 67 (68)
T 3o70_A 14 LYFQGLVTCFCMKPFAGRPMIECNECH---TWIHLSCAKIRKSNVPEVFVCQKCRDS 67 (68)
T ss_dssp CTTTTCCCSTTCCCCTTCCEEECTTTC---CEEETTTTTCCTTSCCSSCCCHHHHTC
T ss_pred CCCCCceEeECCCcCCCCCEEECCCCC---ccccccccCcCcccCCCcEECCCCCCC
Confidence 45678999999999876 599999987 99999999998754 689999999754
No 12
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=99.47 E-value=6.2e-15 Score=99.44 Aligned_cols=47 Identities=26% Similarity=0.740 Sum_probs=41.2
Q ss_pred CCceeecCCCCCC-CcccccCCCCCCcceecccCccCCCC-CCceeCcCCcC
Q psy12696 213 EPTYCVCQQVSYG-EMIGCDNPDCPIEWFHFACVSLTTKP-KGKWYCPKCTS 262 (267)
Q Consensus 213 ~~~~C~C~~~~~~-~mi~Cd~~~c~~~wfH~~Cv~l~~~p-~~~w~C~~C~~ 262 (267)
+.+||+|+++.++ .||+||+|+ +|||+.|||++..+ .+.|+|+.|..
T Consensus 3 d~~~C~C~~~~~~~~MI~Cd~C~---~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 3 DLVTCFCMKPFAGRPMIECNECH---TWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp TCBCSTTCCBCTTCCEEECTTTC---CEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred cCeEEEeCCcCCCCCEEEcCCCC---ccccccccCCCcccCCCcEECcCCCC
Confidence 4689999999775 899999987 99999999998865 68999999964
No 13
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.45 E-value=1.2e-14 Score=105.35 Aligned_cols=53 Identities=40% Similarity=1.024 Sum_probs=44.4
Q ss_pred CCCCCcee-ecCCCCCC-CcccccCCCCCCcceecccCccCCCC--CCceeCcCCcCccc
Q psy12696 210 DPNEPTYC-VCQQVSYG-EMIGCDNPDCPIEWFHFACVSLTTKP--KGKWYCPKCTSDRK 265 (267)
Q Consensus 210 ~~~~~~~C-~C~~~~~~-~mi~Cd~~~c~~~wfH~~Cv~l~~~p--~~~w~C~~C~~~~~ 265 (267)
++++..|| +|+++.++ .||+||.|+ .|||+.|||++..+ .+.|||+.|....+
T Consensus 14 ~~~~~~~C~~C~~~~~~~~mi~CD~C~---~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 14 WGNQIWICPGCNKPDDGSPMIGCDDCD---DWYHWPCVGIMAAPPEEMQWFCPKCANKIK 70 (75)
T ss_dssp SSCEEECBTTTTBCCSSCCEEECSSSS---SEEEHHHHTCSSCCCSSSCCCCTTTHHHHC
T ss_pred cCCCCcCCCCCCCCCCCCCEEEcCCCC---cccccccCCCCccCCCCCCEEChhccCchh
Confidence 45667899 99999876 699999977 89999999987765 48999999976543
No 14
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.44 E-value=2.4e-14 Score=100.54 Aligned_cols=53 Identities=26% Similarity=0.607 Sum_probs=44.8
Q ss_pred CCCCcee-ecCCCC--CCCcccccCCCCCCcceecccCccCCCC---CCceeCcCCcCcccC
Q psy12696 211 PNEPTYC-VCQQVS--YGEMIGCDNPDCPIEWFHFACVSLTTKP---KGKWYCPKCTSDRKK 266 (267)
Q Consensus 211 ~~~~~~C-~C~~~~--~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p---~~~w~C~~C~~~~~~ 266 (267)
.++..|| +|+++. .+.||+||.|+ .|||+.||||+..+ .+.|+|+.|..++.+
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~---~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~~ 61 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCE---MWFHGKCVKITPARAEHIKQYKCPSCSNKSGP 61 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSC---CEEETTTTTCCTTGGGGCSSCCCHHHHTTTCS
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCC---CCCCccccCcChhHhcCCCcEECCCCcCcCCC
Confidence 4578899 999996 47899999977 89999999998775 478999999876543
No 15
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.43 E-value=1.8e-14 Score=105.48 Aligned_cols=51 Identities=31% Similarity=0.726 Sum_probs=43.7
Q ss_pred CCCCceeecCCCC--CCCcccccCCCCCCcceecccCccCCCC---CCceeCcCCcCcc
Q psy12696 211 PNEPTYCVCQQVS--YGEMIGCDNPDCPIEWFHFACVSLTTKP---KGKWYCPKCTSDR 264 (267)
Q Consensus 211 ~~~~~~C~C~~~~--~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p---~~~w~C~~C~~~~ 264 (267)
.++.+||+|+++. ++.||+||.|+ +|||+.||||+..+ .+.|+|+.|....
T Consensus 9 ~~~~~~C~C~~~~d~~~~MIqCd~C~---~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 9 ALVPVYCLCRQPYNVNHFMIECGLCQ---DWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCCSTTSCSCCSSSCEEEBTTTC---CEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred cCCccEEEcCCccCCCCceEEcCCCC---CcEEeeecCcccccccCCCeEECCCccccc
Confidence 3568999999997 57899999977 99999999998765 4799999998654
No 16
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.43 E-value=1.3e-14 Score=105.42 Aligned_cols=52 Identities=40% Similarity=0.894 Sum_probs=43.3
Q ss_pred CCCCCCceeecCCCCC-CCcccccCCCCCCcceecccCccCCCC-------CCceeCcCCcCcc
Q psy12696 209 VDPNEPTYCVCQQVSY-GEMIGCDNPDCPIEWFHFACVSLTTKP-------KGKWYCPKCTSDR 264 (267)
Q Consensus 209 ~~~~~~~~C~C~~~~~-~~mi~Cd~~~c~~~wfH~~Cv~l~~~p-------~~~w~C~~C~~~~ 264 (267)
.|++ .+||+|+++.+ +.||+||.|. .|||+.||||+..+ .+.|||+.|....
T Consensus 12 ~d~~-~~~C~C~~~~~~~~MI~Cd~C~---~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 12 YDPN-ALYCICRQPHNNRFMICCDRCE---EWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp CCTT-CCCSTTCCCCCSSCEEECSSSC---CEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred cCCC-CCEEECCCccCCCCEEEeCCCC---CcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 3444 69999999987 5899999977 99999999998764 4789999997654
No 17
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.41 E-value=4e-14 Score=101.83 Aligned_cols=52 Identities=25% Similarity=0.593 Sum_probs=43.4
Q ss_pred CCCCCceeecCCCC-CC-CcccccCCCCCCcceecccCccCCC--CCCceeCcCCcCcc
Q psy12696 210 DPNEPTYCVCQQVS-YG-EMIGCDNPDCPIEWFHFACVSLTTK--PKGKWYCPKCTSDR 264 (267)
Q Consensus 210 ~~~~~~~C~C~~~~-~~-~mi~Cd~~~c~~~wfH~~Cv~l~~~--p~~~w~C~~C~~~~ 264 (267)
+.++.+||+|+++. ++ .||+||.|. .|||+.||||+.. ..+.|||+.|....
T Consensus 12 ~~~~~~~C~C~~~~~~g~~mI~Cd~C~---~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 12 VDNWKVDCKCGTKDDDGERMLACDGCG---VWHHTRCIGINNADALPSKFLCFRCIELS 67 (72)
T ss_dssp SCSSEECCTTCCCSCCSSCEEECSSSC---EEEETTTTTCCTTSCCCSCCCCHHHHHHC
T ss_pred CCCcceEeeCCCccCCCCcEEECCCCC---CccCCeeeccCccccCCCcEECCCccCCC
Confidence 45678999999985 45 699999987 9999999999864 36899999997543
No 18
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=99.37 E-value=5.1e-14 Score=102.06 Aligned_cols=51 Identities=33% Similarity=0.781 Sum_probs=43.5
Q ss_pred CCCCCceeecCCCCC--CCcccccCCCCCCcceecccCccCCCC---CCceeCcCCcCc
Q psy12696 210 DPNEPTYCVCQQVSY--GEMIGCDNPDCPIEWFHFACVSLTTKP---KGKWYCPKCTSD 263 (267)
Q Consensus 210 ~~~~~~~C~C~~~~~--~~mi~Cd~~~c~~~wfH~~Cv~l~~~p---~~~w~C~~C~~~ 263 (267)
.+++++||+|+++.+ +.||+||.|+ +|||+.|||++..+ .+.|+|+.|...
T Consensus 6 ~~~~~~yCiC~~~~~~~~~MI~Cd~C~---~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 6 MATVPVYCVCRLPYDVTRFMIECDACK---DWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp TCCCCEETTTTEECCTTSCEEECTTTC---CEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred CCCCeeEEECCCcCCCCCCEEEcCCCC---CCEecccccccccccCCCCEEECCCCccc
Confidence 467899999999854 6899999987 99999999999876 378999999643
No 19
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.26 E-value=3.7e-12 Score=96.90 Aligned_cols=51 Identities=25% Similarity=0.698 Sum_probs=41.4
Q ss_pred CCCCceeecCCCC-CCCcccccCCCCCCcceecccCccCCCC-CCceeCcCCcCcc
Q psy12696 211 PNEPTYCVCQQVS-YGEMIGCDNPDCPIEWFHFACVSLTTKP-KGKWYCPKCTSDR 264 (267)
Q Consensus 211 ~~~~~~C~C~~~~-~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p-~~~w~C~~C~~~~ 264 (267)
.++.+.|+|+.+. .+.||+||.|. .|||+.|||++... ++.|||+.|....
T Consensus 25 ~~d~vrCiC~~~~~~~~mi~Cd~C~---~w~H~~C~~~~~~~~p~~w~C~~C~~~~ 77 (98)
T 2lv9_A 25 GTDVTRCICGFTHDDGYMICCDKCS---VWQHIDCMGIDRQHIPDTYLCERCQPRN 77 (98)
T ss_dssp CCCBCCCTTSCCSCSSCEEEBTTTC---BEEETTTTTCCTTSCCSSBCCTTTSSSC
T ss_pred CCCCEEeECCCccCCCcEEEcCCCC---CcCcCcCCCCCccCCCCCEECCCCcCCC
Confidence 3456889999885 47899999987 89999999986543 4689999997543
No 20
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.22 E-value=3.5e-12 Score=98.29 Aligned_cols=49 Identities=41% Similarity=0.972 Sum_probs=40.5
Q ss_pred CCCCCcee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCc
Q psy12696 210 DPNEPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCT 261 (267)
Q Consensus 210 ~~~~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~ 261 (267)
.+.+..|| +|+ ..|+||.||+..||. |||+.||+|+..|.|.||||.|.
T Consensus 11 ~~~~~~~C~~C~--~~G~ll~CD~~~Cp~-~fH~~Cl~L~~~P~g~W~Cp~c~ 60 (107)
T 4gne_A 11 KQMHEDYCFQCG--DGGELVMCDKKDCPK-AYHLLCLNLTQPPYGKWECPWHQ 60 (107)
T ss_dssp CCSSCSSCTTTC--CCSEEEECCSTTCCC-EECTGGGTCSSCCSSCCCCGGGB
T ss_pred cCCCCCCCCcCC--CCCcEeEECCCCCCc-ccccccCcCCcCCCCCEECCCCC
Confidence 34457799 566 458999999555776 99999999999999999999875
No 21
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=99.20 E-value=1.7e-12 Score=99.97 Aligned_cols=47 Identities=26% Similarity=0.748 Sum_probs=39.2
Q ss_pred cee-ecCCC--CCCCccccc-CCCCCCcceecccCccCC--------CCCCceeCcCCcCcc
Q psy12696 215 TYC-VCQQV--SYGEMIGCD-NPDCPIEWFHFACVSLTT--------KPKGKWYCPKCTSDR 264 (267)
Q Consensus 215 ~~C-~C~~~--~~~~mi~Cd-~~~c~~~wfH~~Cv~l~~--------~p~~~w~C~~C~~~~ 264 (267)
..| +|+++ +++.||+|| .|+ +|||+.||||+. .|.+.|+||.|....
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~---~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQ---KWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTC---CEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred CCCCCCCCccCCCCCEEEecCCcc---cccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 357 99999 567899998 766 899999999986 466899999997543
No 22
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.18 E-value=5.4e-12 Score=89.08 Aligned_cols=48 Identities=40% Similarity=0.897 Sum_probs=40.8
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccCc--cCCCCCCceeCcCCcCccc
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS--LTTKPKGKWYCPKCTSDRK 265 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~~w~C~~C~~~~~ 265 (267)
...+| +|+.. |+||.||.|. .|||+.|++ |+..|.+.|||+.|...+.
T Consensus 7 ~~~~C~vC~~~--g~ll~CD~C~---~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 57 (66)
T 1xwh_A 7 NEDECAVCRDG--GELICCDGCP---RAFHLACLSPPLREIPSGTWRCSSCLQATV 57 (66)
T ss_dssp CCCSBSSSSCC--SSCEECSSCC---CEECTTTSSSCCSSCCSSCCCCHHHHHTCC
T ss_pred CCCCCccCCCC--CCEEEcCCCC---hhhcccccCCCcCcCCCCCeECccccCccc
Confidence 45678 89876 8999999965 599999999 8888999999999976554
No 23
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.17 E-value=2e-11 Score=84.87 Aligned_cols=48 Identities=35% Similarity=0.988 Sum_probs=40.7
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccCc--cCCCCCCceeCcCCcCccc
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS--LTTKPKGKWYCPKCTSDRK 265 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~~w~C~~C~~~~~ 265 (267)
...+| +|+.. ++||.||.|. .+||+.|++ |+..|.+.|||+.|.....
T Consensus 8 ~~~~C~vC~~~--g~ll~Cd~C~---~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~ 58 (61)
T 1mm2_A 8 HMEFCRVCKDG--GELLCCDTCP---SSYHIHCLNPPLPEIPNGEWLCPRCTCPAL 58 (61)
T ss_dssp SCSSCTTTCCC--SSCBCCSSSC---CCBCSSSSSSCCSSCCSSCCCCTTTTTTCC
T ss_pred CCCcCCCCCCC--CCEEEcCCCC---HHHcccccCCCcCcCCCCccCChhhcCchh
Confidence 45577 89875 8999999966 689999999 8888999999999987654
No 24
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=99.15 E-value=1.7e-12 Score=108.39 Aligned_cols=52 Identities=29% Similarity=0.816 Sum_probs=41.4
Q ss_pred CCCCCCceeecCCCC--CCCcccccCCCCCCcceecccCccCCCC---CCceeCcCCcCc
Q psy12696 209 VDPNEPTYCVCQQVS--YGEMIGCDNPDCPIEWFHFACVSLTTKP---KGKWYCPKCTSD 263 (267)
Q Consensus 209 ~~~~~~~~C~C~~~~--~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p---~~~w~C~~C~~~ 263 (267)
.+.++..||+|+++. ++.||+||.|. .|||+.|||++..+ .+.|+|+.|...
T Consensus 3 ~~~~~~~~C~C~~~~~~~~~mi~Cd~C~---~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 3 LGSDTKLYCICKTPEDESKFYIGCDRCQ---NWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp ----CCEETTTTEECCTTSCEEECTTTC---CEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCCCCCcEeeCCCCCCCCCCEeECCCCC---chhChhhcCCchhhccCccCeecCCCcch
Confidence 456678999999985 47899999976 89999999987654 689999999753
No 25
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=99.14 E-value=5.5e-12 Score=84.86 Aligned_cols=43 Identities=30% Similarity=0.739 Sum_probs=35.6
Q ss_pred eeecCCCCC--CCccccc-CCCCCCcceecccCccCCCC--CCceeCcCCc
Q psy12696 216 YCVCQQVSY--GEMIGCD-NPDCPIEWFHFACVSLTTKP--KGKWYCPKCT 261 (267)
Q Consensus 216 ~C~C~~~~~--~~mi~Cd-~~~c~~~wfH~~Cv~l~~~p--~~~w~C~~C~ 261 (267)
.|+|+++.+ +.||+|| .|+ +|||+.||||+..+ .++|+|+.|.
T Consensus 5 cc~C~~p~~~~~~mI~Cd~~C~---~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 5 AQNCQRPCKDKVDWVQCDGGCD---EWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp CTTCCCCCCTTCCEEECTTTTC---CEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred CCCCcCccCCCCcEEEeCCCCC---ccCcccccCCCccccCCCCEECCCCC
Confidence 469999864 4699999 666 89999999998765 5899999995
No 26
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=99.14 E-value=2.9e-12 Score=90.18 Aligned_cols=42 Identities=26% Similarity=0.756 Sum_probs=35.9
Q ss_pred eecCCCCC--CCccccc-CCCCCCcceecccCccCCC--------CCCceeCcCCc
Q psy12696 217 CVCQQVSY--GEMIGCD-NPDCPIEWFHFACVSLTTK--------PKGKWYCPKCT 261 (267)
Q Consensus 217 C~C~~~~~--~~mi~Cd-~~~c~~~wfH~~Cv~l~~~--------p~~~w~C~~C~ 261 (267)
++|+++.+ ..||+|| .|+ .|||+.||||+.. |.+.|+|+.|.
T Consensus 12 ~~C~~p~~~~~~mI~CD~~C~---~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 12 GICTNEVNDDQDAILCEASCQ---KWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp TTTCSBCCTTSCEEEBTTTTC---CEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred ccCCCccCCCCCeEecccCcc---ccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 39999864 5699999 877 8999999999873 67799999985
No 27
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.13 E-value=1.6e-11 Score=82.19 Aligned_cols=45 Identities=36% Similarity=0.941 Sum_probs=38.2
Q ss_pred ee-ecCCCC-CCCcccccCCCCCCcceecccC--ccCCCCCCceeCcCCcCc
Q psy12696 216 YC-VCQQVS-YGEMIGCDNPDCPIEWFHFACV--SLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 216 ~C-~C~~~~-~~~mi~Cd~~~c~~~wfH~~Cv--~l~~~p~~~w~C~~C~~~ 263 (267)
+| +|++.. .+.||.||.|+ .|||+.|+ +++..|.|.|||+.|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~---~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECN---KAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTC---CEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCCCCEEECCCCC---hhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 46 888774 46799999976 79999999 588899999999999753
No 28
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.12 E-value=1.8e-11 Score=85.06 Aligned_cols=47 Identities=43% Similarity=1.058 Sum_probs=39.7
Q ss_pred CCCcee-ecCCCCCCCcccccCCCCCCcceecccCcc--CCCCCCceeCcCCcCc
Q psy12696 212 NEPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSL--TTKPKGKWYCPKCTSD 263 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l--~~~p~~~w~C~~C~~~ 263 (267)
....+| +|++. ++||.||.|. .|||+.|++. +..|.+.|||+.|...
T Consensus 9 ~~~~~C~vC~~~--g~ll~CD~C~---~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 9 DHQDYCEVCQQG--GEIILCDTCP---RAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CCCSSCTTTSCC--SSEEECSSSS---CEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCCccCCCC--CcEEECCCCC---hhhhhhccCCCCCCCCCCceECcccccc
Confidence 446788 79885 8999999965 5999999995 6788999999999764
No 29
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.11 E-value=7.2e-12 Score=89.66 Aligned_cols=51 Identities=25% Similarity=0.658 Sum_probs=41.9
Q ss_pred CCCcee-ecCCCC---CCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCccc
Q psy12696 212 NEPTYC-VCQQVS---YGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSDRK 265 (267)
Q Consensus 212 ~~~~~C-~C~~~~---~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~~~ 265 (267)
.+..+| +|+... .+.||.||.|+ .|||..|++++..|.|.|||+.|...+.
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~CD~C~---~~~H~~Cl~~~~vP~g~W~C~~C~~~~~ 68 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILFCDMCN---LAVHQECYGVPYIPEGQWLCRHCLQSRA 68 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEECSSSC---CEEEHHHHTCSSCCSSCCCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCC---CccccccCCCCcCCCCCcCCccCcCcCc
Confidence 345567 998773 46899999976 6999999999999999999999976543
No 30
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.10 E-value=2.1e-11 Score=83.28 Aligned_cols=45 Identities=38% Similarity=1.110 Sum_probs=39.1
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccCc--cCCCCCCceeCcCCcC
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS--LTTKPKGKWYCPKCTS 262 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~~w~C~~C~~ 262 (267)
...+| +|+.. +.||.||.|. .|||+.|++ |+..|.+.|||+.|..
T Consensus 8 ~~~~C~vC~~~--g~ll~Cd~C~---~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 8 HEDFCSVCRKS--GQLLMCDTCS---RVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCCSCSSSCCS--SCCEECSSSS---CEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCccCCCC--CeEEEcCCCC---cceECccCCCCcCCCCCCceEChhhhC
Confidence 35578 89886 8999999966 799999999 8889999999999964
No 31
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.08 E-value=7.9e-12 Score=119.82 Aligned_cols=51 Identities=37% Similarity=0.843 Sum_probs=43.7
Q ss_pred CCCCCCceeecCCCC--CCCcccccCCCCCCcceecccCccCCCC---CCceeCcCCcC
Q psy12696 209 VDPNEPTYCVCQQVS--YGEMIGCDNPDCPIEWFHFACVSLTTKP---KGKWYCPKCTS 262 (267)
Q Consensus 209 ~~~~~~~~C~C~~~~--~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p---~~~w~C~~C~~ 262 (267)
...++.+||+|+++. ++.||+||.|+ +|||+.|||++..+ .+.|+|+.|..
T Consensus 32 ~~~~~~~yC~C~~~~d~~~~MIqCd~C~---~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 87 (488)
T 3kv5_D 32 PPPPPPVYCVCRQPYDVNRFMIECDICK---DWFHGSCVGVEEHHAVDIDLYHCPNCAV 87 (488)
T ss_dssp CCCCCCEETTTTEECCTTSCEEEBTTTC---CEEEHHHHTCCGGGGGGEEEBCCHHHHH
T ss_pred cCCCCCeEEeCCCcCCCCCCeEEccCCC---CceeeeecCcCcccccCCCEEECCCCcC
Confidence 345678999999986 57899999977 99999999998876 37899999964
No 32
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.08 E-value=1.5e-11 Score=91.68 Aligned_cols=49 Identities=24% Similarity=0.645 Sum_probs=40.5
Q ss_pred Ccee-ecCCCC---CCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCccc
Q psy12696 214 PTYC-VCQQVS---YGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSDRK 265 (267)
Q Consensus 214 ~~~C-~C~~~~---~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~~~ 265 (267)
..+| +|+... .+.||.||.|. .|||+.|++++..|.|.|||+.|.....
T Consensus 25 ~~~C~vC~~~~s~~~~~ll~CD~C~---~~fH~~Cl~p~~vP~g~W~C~~C~~~~~ 77 (88)
T 2l43_A 25 DAVCSICMDGESQNSNVILFCDMCN---LAVHQECYGVPYIPEGQWLCRHCLQSRA 77 (88)
T ss_dssp CCCCSSCCSSSSCSEEEEEECSSSC---CCCCHHHHTCSSCCSSCCCCHHHHHHTT
T ss_pred CCcCCcCCCCCCCCCCCEEECCCCC---chhhcccCCCCccCCCceECccccCccc
Confidence 4456 998873 35799999966 6999999999989999999999976543
No 33
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.07 E-value=1.3e-11 Score=85.40 Aligned_cols=47 Identities=36% Similarity=1.040 Sum_probs=40.1
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCc--cCCCCCCceeCcCCcCccc
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS--LTTKPKGKWYCPKCTSDRK 265 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~~w~C~~C~~~~~ 265 (267)
..+| +|+.. |.||.||.|. .|||+.|++ ++..|.+.|||+.|.....
T Consensus 5 ~~~C~vC~~~--g~ll~Cd~C~---~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~ 54 (60)
T 2puy_A 5 EDFCSVCRKS--GQLLMCDTCS---RVYHLDCLDPPLKTIPKGMWICPRCQDQML 54 (60)
T ss_dssp CSSCTTTCCC--SSCEECSSSS---CEECGGGSSSCCSSCCCSCCCCHHHHHHHH
T ss_pred CCCCcCCCCC--CcEEEcCCCC---cCEECCcCCCCcCCCCCCceEChhccChhh
Confidence 3467 89886 8999999966 799999999 8888999999999976543
No 34
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.04 E-value=1.2e-10 Score=82.02 Aligned_cols=45 Identities=27% Similarity=0.638 Sum_probs=38.7
Q ss_pred cee-ecCCCCCCCcccccCCCCCCcceecccCc--cCCCCCCceeCcCCcCcc
Q psy12696 215 TYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS--LTTKPKGKWYCPKCTSDR 264 (267)
Q Consensus 215 ~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~~w~C~~C~~~~ 264 (267)
..| +|++. ++||.||.|+ .|||+.|+. |...|.+.|||+.|....
T Consensus 13 ~~C~vC~~~--~~ll~Cd~C~---~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 13 ARCGVCGDG--TDVLRCTHCA---AAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp CCCTTTSCC--TTCEECSSSC---CEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCcCCCCCC--CeEEECCCCC---CceecccCCCccCcCCCCCEECccccCCC
Confidence 457 99876 8899999977 799999996 888999999999998654
No 35
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.03 E-value=4.3e-11 Score=89.89 Aligned_cols=48 Identities=33% Similarity=0.854 Sum_probs=40.4
Q ss_pred CCcee-ecCCCCC-CCcccccCCCCCCcceecccCc--cCCCCCCceeCcCCcCc
Q psy12696 213 EPTYC-VCQQVSY-GEMIGCDNPDCPIEWFHFACVS--LTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 213 ~~~~C-~C~~~~~-~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~~w~C~~C~~~ 263 (267)
+..+| +|+.... +.||.||.|+ .|||+.|++ |+..|.+.|||+.|...
T Consensus 15 ~~~~C~vC~~~~~~~~ll~CD~C~---~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 15 DSYICQVCSRGDEDDKLLFCDGCD---DNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCSSSCCSGGGGGCEECTTTC---CEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred CCCCCccCCCcCCCCCEEEcCCCC---chhccccCCCCcccCCCCCcCCccCcCc
Confidence 45568 9998753 5799999976 699999999 88899999999999753
No 36
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.94 E-value=9.5e-10 Score=81.54 Aligned_cols=47 Identities=32% Similarity=0.807 Sum_probs=39.7
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccC--ccCCCCCCceeCcCCcCcc
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACV--SLTTKPKGKWYCPKCTSDR 264 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv--~l~~~p~~~w~C~~C~~~~ 264 (267)
...+| +|+.. |+||+||.|. ..||+.|+ +|+..|.|.|||+.|....
T Consensus 24 n~~~C~vC~~~--g~LL~CD~C~---~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 24 SATICRVCQKP--GDLVMCNQCE---FCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp SSSCCSSSCSS--SCCEECTTSS---CEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCCcCcCcCCC--CCEEECCCCC---CceecccCCCCCCCCcCCCcCCccccCCC
Confidence 45578 99887 7899999955 46999999 6989999999999998544
No 37
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.93 E-value=2.6e-10 Score=80.20 Aligned_cols=52 Identities=25% Similarity=0.622 Sum_probs=40.9
Q ss_pred CCCCcee-ecCCCC---CCCcccccCCCCCCcceecccCccC--C---CCCCceeCcCCcCccc
Q psy12696 211 PNEPTYC-VCQQVS---YGEMIGCDNPDCPIEWFHFACVSLT--T---KPKGKWYCPKCTSDRK 265 (267)
Q Consensus 211 ~~~~~~C-~C~~~~---~~~mi~Cd~~~c~~~wfH~~Cv~l~--~---~p~~~w~C~~C~~~~~ 265 (267)
+.+..+| +|+... .+.||.||.|+ .|||..|++.. . .|.+.|||+.|.....
T Consensus 3 ~~~~~~C~vC~~~~~~~~~~ll~Cd~C~---~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~ 63 (66)
T 2yt5_A 3 SGSSGVCTICQEEYSEAPNEMVICDKCG---QGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATT 63 (66)
T ss_dssp CCCCCCBSSSCCCCCBTTBCEEECSSSC---CEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTS
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCC---hHHHhhhCCCcccccccCCCCCEECCCCcCccc
Confidence 4456677 998763 37899999977 79999999953 3 2789999999986654
No 38
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.89 E-value=7.3e-10 Score=78.98 Aligned_cols=43 Identities=35% Similarity=0.909 Sum_probs=36.7
Q ss_pred ecCCCC-CCCcccccCCCCCCcceecccCc--cCCCCCC-ceeCcCCcCc
Q psy12696 218 VCQQVS-YGEMIGCDNPDCPIEWFHFACVS--LTTKPKG-KWYCPKCTSD 263 (267)
Q Consensus 218 ~C~~~~-~~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~-~w~C~~C~~~ 263 (267)
+|++.. .+.||.||.|+ .|||+.|++ |+..|.| .|||+.|..+
T Consensus 23 ~C~~~~~~~~ll~CD~C~---~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 23 LCGGRQDPDKQLMCDECD---MAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp TTCCCSCGGGEEECTTTC---CEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCCCcCCCCCEEEcCCCC---CceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 567654 47899999977 799999999 8899999 9999999864
No 39
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.84 E-value=1.7e-09 Score=78.40 Aligned_cols=44 Identities=32% Similarity=0.838 Sum_probs=37.9
Q ss_pred ee-ecCCCC-CCCcccccCCCCCCcceecccCc--cCCCCCC-ceeCcCCcC
Q psy12696 216 YC-VCQQVS-YGEMIGCDNPDCPIEWFHFACVS--LTTKPKG-KWYCPKCTS 262 (267)
Q Consensus 216 ~C-~C~~~~-~~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~-~w~C~~C~~ 262 (267)
+| +|++.. .+.||.||.|+ .+||+.|++ |+..|.| .|||+.|..
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~---~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECN---VAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSC---CEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcCCCCCEEEcCCCC---ccccccccCCCccCCCCCCCcCCcCccC
Confidence 55 788764 57899999976 689999999 8889999 999999975
No 40
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.75 E-value=8.8e-10 Score=82.03 Aligned_cols=50 Identities=30% Similarity=0.820 Sum_probs=39.6
Q ss_pred CCcee-ecCCCCC---CCcccccCCCCCCcceecccCc--cCC----CCCCceeCcCCcCccc
Q psy12696 213 EPTYC-VCQQVSY---GEMIGCDNPDCPIEWFHFACVS--LTT----KPKGKWYCPKCTSDRK 265 (267)
Q Consensus 213 ~~~~C-~C~~~~~---~~mi~Cd~~~c~~~wfH~~Cv~--l~~----~p~~~w~C~~C~~~~~ 265 (267)
+..+| +|+.... +.||.||.|+ ..||..|++ |.. .|.+.|||+.|....+
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~---~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECH---NLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSC---CEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCC---CeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 45678 9988743 7899999976 679999999 442 6899999999975543
No 41
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.66 E-value=9.9e-09 Score=74.36 Aligned_cols=43 Identities=35% Similarity=0.906 Sum_probs=35.1
Q ss_pred ecCCCCC-CCcccccCCCCCCcceecccCc--cCCCCCCc-eeCcCCcCc
Q psy12696 218 VCQQVSY-GEMIGCDNPDCPIEWFHFACVS--LTTKPKGK-WYCPKCTSD 263 (267)
Q Consensus 218 ~C~~~~~-~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~~-w~C~~C~~~ 263 (267)
+|++... +.||.||.|+ .+||+.|++ |...|.+. |||+.|..+
T Consensus 31 vC~~~~d~~~ll~CD~C~---~~yH~~Cl~PpL~~~P~g~~W~C~~C~~d 77 (77)
T 3shb_A 31 LCGGRQDPDKQLMCDECD---MAFHIYCLDPPLSSVPSEDEWYCPECRND 77 (77)
T ss_dssp TTCCCSCGGGEEECTTTC---CEEETTTSSSCCSSCCSSSCCCCTTTC--
T ss_pred ccCCCCCCcceeEeCCCC---CccCcccCCCcccCCCCCCceECcCcccc
Confidence 6666643 6799999966 689999999 88999988 999999753
No 42
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.66 E-value=2.5e-09 Score=83.29 Aligned_cols=47 Identities=28% Similarity=0.742 Sum_probs=39.3
Q ss_pred ee-ecCCCC-CCCcccccCCCCCCcceecccCc--cCCCCCCceeCcCCcCccc
Q psy12696 216 YC-VCQQVS-YGEMIGCDNPDCPIEWFHFACVS--LTTKPKGKWYCPKCTSDRK 265 (267)
Q Consensus 216 ~C-~C~~~~-~~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~~w~C~~C~~~~~ 265 (267)
+| +|++.. .+.||.||.|+ .|||+.|++ |+..|.|.|||+.|....+
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~C~---~~yH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 110 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDDCD---RGYHMYCLNPPVAEPPEGSWSCHLCWELLK 110 (114)
T ss_dssp CCTTTTCCTTTTTEEECSSSC---CEEETTTSSSCCSSCCSSCCCCHHHHHHHH
T ss_pred ccCcccccCCCCceEEcCCCC---ccccccccCCCccCCCCCCeECccccchhh
Confidence 56 777764 47899999977 799999999 8889999999999976543
No 43
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.57 E-value=1.7e-08 Score=87.11 Aligned_cols=45 Identities=36% Similarity=0.937 Sum_probs=34.0
Q ss_pred ee-ecCCCC-CCCcccccCCCCCCcceecccCc--cCCCCCC-ceeCcCCcCc
Q psy12696 216 YC-VCQQVS-YGEMIGCDNPDCPIEWFHFACVS--LTTKPKG-KWYCPKCTSD 263 (267)
Q Consensus 216 ~C-~C~~~~-~~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~-~w~C~~C~~~ 263 (267)
.| +|+... .+.||+||.|+ .|||+.|++ |+..|.| .||||.|..+
T Consensus 176 ~C~vC~~~~~~~~lL~CD~C~---~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 176 ACHLCGGRQDPDKQLMCDECD---MAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp SCSSSCCCCC--CCEECSSSC---CEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCcCCCCCCCCCCeEEcCCCC---cceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 46 787764 47899999977 689999999 8888998 9999999754
No 44
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.53 E-value=1.7e-08 Score=96.57 Aligned_cols=35 Identities=40% Similarity=1.010 Sum_probs=31.1
Q ss_pred CCcccccCCCCCCcceecccCccCCCC---CCceeCcCCcC
Q psy12696 225 GEMIGCDNPDCPIEWFHFACVSLTTKP---KGKWYCPKCTS 262 (267)
Q Consensus 225 ~~mi~Cd~~~c~~~wfH~~Cv~l~~~p---~~~w~C~~C~~ 262 (267)
..||+||+|+ +|||+.||||+..+ .+.|+||.|..
T Consensus 56 ~~mI~CD~C~---~WfH~~CVgi~~~~a~~~~~y~Cp~C~~ 93 (528)
T 3pur_A 56 FQWIGCDSCQ---TWYHFLCSGLEQFEYYLYEKFFCPKCVP 93 (528)
T ss_dssp TSEEECTTTC---CEEEGGGTTCCGGGTTTEEECCCTTTHH
T ss_pred CCEEECCCCC---cCCCCcCCCCChhHhcCCCeEECcCCcC
Confidence 6799999988 99999999998864 57899999975
No 45
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.51 E-value=5.7e-08 Score=75.28 Aligned_cols=44 Identities=39% Similarity=0.901 Sum_probs=36.9
Q ss_pred ee-ecCCCC--CCCcccccCCCCCCcceecccC--ccCCCCCCceeCcCCcC
Q psy12696 216 YC-VCQQVS--YGEMIGCDNPDCPIEWFHFACV--SLTTKPKGKWYCPKCTS 262 (267)
Q Consensus 216 ~C-~C~~~~--~~~mi~Cd~~~c~~~wfH~~Cv--~l~~~p~~~w~C~~C~~ 262 (267)
+| +|+... .+.||.||.|+ .+||+.|+ .|...|.|.|||+.|+.
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~---~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCD---RGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTC---CEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccceEEcCCCC---CeeecccCCCCCCCCCCCCeECCCCCC
Confidence 56 777653 36899999976 68999999 48899999999999975
No 46
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.30 E-value=1.7e-07 Score=72.36 Aligned_cols=45 Identities=29% Similarity=0.751 Sum_probs=37.3
Q ss_pred ee-ecCCCCC-CCcccccCCCCCCcceecccCc--cCCCCCCceeCcCCcCc
Q psy12696 216 YC-VCQQVSY-GEMIGCDNPDCPIEWFHFACVS--LTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 216 ~C-~C~~~~~-~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~~w~C~~C~~~ 263 (267)
+| +|++... ..||.||.|+ .|||+.|+. ++..|.+.|||+.|..-
T Consensus 56 ~C~~C~~~~~~~~ll~Cd~C~---~~yH~~Cl~ppl~~~P~g~W~C~~C~~c 104 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCDTCD---KGYHTFCLQPVMKSVPTNGWKCKNCRIC 104 (111)
T ss_dssp CCTTTCCCSCCTTEEECSSSC---CEEEGGGSSSCCSSCCSSCCCCHHHHCC
T ss_pred cccccCccCCCCCeeECCCCC---cHHhHHhcCCccccCCCCCcCCcCCcCc
Confidence 56 7877743 5699999977 799999999 88889999999999653
No 47
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.04 E-value=1.1e-06 Score=70.67 Aligned_cols=45 Identities=29% Similarity=0.784 Sum_probs=37.4
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCccCC---------CCCCceeCcCCcCc
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTT---------KPKGKWYCPKCTSD 263 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~---------~p~~~w~C~~C~~~ 263 (267)
..|| +|+.. |++|+||. ||+. ||+.|+.... .|.+.|+|+.|...
T Consensus 63 ~d~C~vC~~G--G~LlcCD~--Cpr~-Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 63 DEQCRWCAEG--GNLICCDF--CHNA-FCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp BCSCSSSCCC--SSEEECSS--SCCE-EEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCeecccCCC--CcEEeCCC--CCCe-eeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 4689 99988 99999998 7775 9999998322 47899999999764
No 48
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=97.93 E-value=1.3e-06 Score=69.15 Aligned_cols=46 Identities=30% Similarity=0.769 Sum_probs=37.4
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccCcc-------CCC--CCCceeCcCCcCc
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSL-------TTK--PKGKWYCPKCTSD 263 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l-------~~~--p~~~w~C~~C~~~ 263 (267)
...|| +|+.. |++|+||. ||+. ||..|+.. ... |.+.|+|+.|...
T Consensus 56 ~~~~C~vC~dG--G~LlcCd~--Cpr~-Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 56 MDEQCRWCAEG--GNLICCDF--CHNA-FCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp CBSSCTTTCCC--SEEEECSS--SSCE-EEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCcCeecCCC--CeeEecCC--Cchh-hhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 35689 99988 99999998 7775 99999983 233 7899999999764
No 49
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=97.92 E-value=7.1e-06 Score=63.10 Aligned_cols=45 Identities=24% Similarity=0.744 Sum_probs=35.7
Q ss_pred Ccee-ecCCCCC-CCcccccCCCCCCcceecccCccCCCC--CCceeCcCCc
Q psy12696 214 PTYC-VCQQVSY-GEMIGCDNPDCPIEWFHFACVSLTTKP--KGKWYCPKCT 261 (267)
Q Consensus 214 ~~~C-~C~~~~~-~~mi~Cd~~~c~~~wfH~~Cv~l~~~p--~~~w~C~~C~ 261 (267)
..+| +|+.... .+||.|+.|. ..||+.|+++...+ .+.|+|+.|.
T Consensus 7 ~~~C~~C~~~g~~~~ll~C~~C~---~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 7 GANCAVCDSPGDLLDQFFCTTCG---QHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CSCBTTTCCCCCTTTSEECSSSC---CEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCcCCCCCCCCcCCeECCCCC---CCcChHHhCCccccccccCccCCcCC
Confidence 4467 9988854 5689999954 56999999977665 6899999984
No 50
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=97.76 E-value=4.2e-06 Score=64.87 Aligned_cols=44 Identities=30% Similarity=0.679 Sum_probs=33.4
Q ss_pred cee-ecCCCC--------CCCcccccCCCCCCcceecccCccC-----CCCCCceeCcCCc
Q psy12696 215 TYC-VCQQVS--------YGEMIGCDNPDCPIEWFHFACVSLT-----TKPKGKWYCPKCT 261 (267)
Q Consensus 215 ~~C-~C~~~~--------~~~mi~Cd~~~c~~~wfH~~Cv~l~-----~~p~~~w~C~~C~ 261 (267)
.+| +|.++. .++||.|+.|. ..||..|+++. ..|.+.|+|+.|.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~---~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCG---RSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSC---CEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCC---CccchhhCCChhhhhhccCCCccCccccC
Confidence 367 776653 25899999954 56999999976 3567899999883
No 51
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.73 E-value=5.3e-06 Score=64.07 Aligned_cols=44 Identities=23% Similarity=0.603 Sum_probs=34.1
Q ss_pred cee-ecCCCC-------CCCcccccCCCCCCcceecccCccC-----CCCCCceeCcCCc
Q psy12696 215 TYC-VCQQVS-------YGEMIGCDNPDCPIEWFHFACVSLT-----TKPKGKWYCPKCT 261 (267)
Q Consensus 215 ~~C-~C~~~~-------~~~mi~Cd~~~c~~~wfH~~Cv~l~-----~~p~~~w~C~~C~ 261 (267)
.+| +|.+.. .++||.|+.|. .+||++|+++. ..+.+.|+|+.|.
T Consensus 6 ~~C~~C~~~~~~~~~g~~~~Ll~C~~C~---~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 6 PICSFCLGTKEQNREKKPEELISCADCG---NSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp SSBTTTCCCTTCCTTSCCCCCEECTTTC---CEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred ccccccCCchhhCcCCCchhceEhhhcC---CCCCCchhcCCHHHHHHhhccccccccCC
Confidence 467 886542 35799999976 68999999864 3457899999994
No 52
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=97.11 E-value=0.00024 Score=54.81 Aligned_cols=38 Identities=24% Similarity=0.623 Sum_probs=28.1
Q ss_pred CCcccccCCCCCCcceecccCccCCC------CCCceeCcCCcCccc
Q psy12696 225 GEMIGCDNPDCPIEWFHFACVSLTTK------PKGKWYCPKCTSDRK 265 (267)
Q Consensus 225 ~~mi~Cd~~~c~~~wfH~~Cv~l~~~------p~~~w~C~~C~~~~~ 265 (267)
..||.|+.|+ .|||..|+++... ..+.|+||.|..+.+
T Consensus 73 ~~m~~C~~C~---~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~~ 116 (117)
T 4bbq_A 73 KKLMECCICN---EIVHPGCLQMDGEGLLNEELPNCWECPKCYQEDS 116 (117)
T ss_dssp GSCEEETTTC---CEECGGGCCSCCCCEECSSSSSEEECTTTC----
T ss_pred cceEEeeecC---CeEECCCCCCCccccccccCCCCeECCCCcCCCC
Confidence 3499999998 9999999997542 245699999987643
No 53
>2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd}
Probab=95.31 E-value=0.45 Score=35.07 Aligned_cols=87 Identities=15% Similarity=0.270 Sum_probs=62.6
Q ss_pred HHHHHHHHhhcchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChh-HHH-HHHHHHHHHHHHHHHhHHHHH
Q psy12696 5 YLEQYLDSLDSLPIELQRNFTLMRELDSRAQDVMKTIDRVAEDYLDNMKHYSKD-KKK-ETLAEIQKYFDKTKEYGDDKV 82 (267)
Q Consensus 5 yLedfld~ie~LP~El~r~l~~irelD~~~~~~~~~i~~~~~~~~k~~~~~~~~-~~~-~~~~~I~~~~~~~~~lsdEKv 82 (267)
-+|+.++.+-.|..++.|.-..|.-+|.++..-...|...-...-.+...+... .|. .+-++|.+..+++.++.+.=-
T Consensus 7 ~~~~~~~~~~~~~~~~~ri~~aig~~d~ri~~NtqaI~~NS~aiaanTr~lQqh~aRlnsqQrQI~ENhkEMKq~aaqsa 86 (114)
T 2xzr_A 7 KIEEILSKIYHIENEIARIKKLIGAIDGRVTRNTQSIEKNSKAIAANTRTLQQHSARLDSQQRQINENHKEMKQIEDKIE 86 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcchHHHHHHHHhhhhHHHHhhHHHHHhchHHHHHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 468899999999999999999999999999887777764433332222222221 222 455678888888888888877
Q ss_pred HHHHHHHHH
Q psy12696 83 QLAIQTYEM 91 (267)
Q Consensus 83 ~LA~~a~dl 91 (267)
+|++..|-+
T Consensus 87 aLlsk~yh~ 95 (114)
T 2xzr_A 87 EILSKIYHI 95 (114)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHhhHH
Confidence 788777753
No 54
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=95.08 E-value=0.017 Score=41.78 Aligned_cols=45 Identities=22% Similarity=0.572 Sum_probs=33.9
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCcc----C----------CCCCCceeCcCCc
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSL----T----------TKPKGKWYCPKCT 261 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l----~----------~~p~~~w~C~~C~ 261 (267)
...| +|.....+.++.|.-|. + =||..|+.- . ..+..-|.|+.|.
T Consensus 15 D~~C~VC~~~t~~~l~pCRvC~--R-vfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Ce 74 (89)
T 1wil_A 15 DEMCDVCEVWTAESLFPCRVCT--R-VFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCD 74 (89)
T ss_dssp SCCCTTTCCCCSSCCSSCSSSS--S-CCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTC
T ss_pred CcccCccccccccceecccccc--c-cccHhhcccccccccHHHHHHHHccCCCCCccccccc
Confidence 4467 89888888999999955 4 599999862 1 1235679999995
No 55
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=94.34 E-value=0.013 Score=47.62 Aligned_cols=49 Identities=31% Similarity=0.745 Sum_probs=38.7
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccCccCCCC--------CCceeCcCCcCcc
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKP--------KGKWYCPKCTSDR 264 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p--------~~~w~C~~C~~~~ 264 (267)
-..|| +|... |++|.|||..|+.. |=..||.+-.-| .+.|.|-.|.+..
T Consensus 78 ~~~yC~wC~~G--g~l~~Cdn~~C~r~-FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 78 YQSYCTICCGG--REVLMCGNNNCCRC-FCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp SBSSCTTTSCC--SEEEECSSTTTCCE-EEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CcceeeEecCC--CeEEeeCCCCCCCc-hhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 46799 99987 89999998778875 999998743333 5789999997653
No 56
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=94.06 E-value=0.016 Score=53.46 Aligned_cols=48 Identities=31% Similarity=0.838 Sum_probs=38.8
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccCccCCCC--------CCceeCcCCcCc
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKP--------KGKWYCPKCTSD 263 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p--------~~~w~C~~C~~~ 263 (267)
...|| +|+.. |+++.|||+.|++. |=..|+....-| .+.|.|-.|...
T Consensus 92 ~~~yCr~C~~G--g~l~~Cdn~~C~r~-FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 92 YQSYCSICCSG--ETLLICGNPDCTRC-YCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp SBCSCTTTCCC--SSCEECCSTTCCCE-ECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred CcccceEcCCC--CeEEEeCCCCCCcc-hHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 46799 99987 89999998889885 889998844433 578999999765
No 57
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=90.43 E-value=6.2 Score=37.57 Aligned_cols=54 Identities=22% Similarity=0.255 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12696 62 ETLAEIQKYFDKTKEYGDDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQEKAL 115 (267)
Q Consensus 62 ~~~~~I~~~~~~~~~lsdEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~~~~~ 115 (267)
..+.+|...|.+-+.+-++||.---+...+|...|+.+=.+|++||.+|..+++
T Consensus 106 NtynE~S~ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLEvDIdiqir 159 (562)
T 3ghg_A 106 NTYNRVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIR 159 (562)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666666666667776655566677888888888888888888877654
No 58
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=88.69 E-value=0.067 Score=36.13 Aligned_cols=51 Identities=20% Similarity=0.309 Sum_probs=30.8
Q ss_pred CCCcee-ecCCCCCCCcccccCCCCCC--cceecccCccCCCCCCceeCcCCcCcc
Q psy12696 212 NEPTYC-VCQQVSYGEMIGCDNPDCPI--EWFHFACVSLTTKPKGKWYCPKCTSDR 264 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~~mi~Cd~~~c~~--~wfH~~Cv~l~~~p~~~w~C~~C~~~~ 264 (267)
++...| +|.....+.+| .-|.|+. .|||..|+---....+.+.||.|...-
T Consensus 4 ~~~~~CrIC~~~~~~~l~--~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~ 57 (60)
T 1vyx_A 4 EDVPVCWICNEELGNERF--RACGCTGELENVHRSCLSTWLTISRNTACQICGVVY 57 (60)
T ss_dssp CSCCEETTTTEECSCCCC--CSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBC
T ss_pred CCCCEeEEeecCCCCcee--cCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCee
Confidence 345567 88665444443 2333432 689999997332223468999997653
No 59
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=87.37 E-value=0.21 Score=36.31 Aligned_cols=32 Identities=31% Similarity=0.790 Sum_probs=25.6
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCc
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS 246 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~ 246 (267)
.+-| +|++...|--|+|....|.. +||+.|.-
T Consensus 17 ~l~C~iC~~~~~GAciqC~~~~C~~-~fHv~CA~ 49 (87)
T 2lq6_A 17 KLTCYLCKQKGVGASIQCHKANCYT-AFHVTCAQ 49 (87)
T ss_dssp CCCBTTTTBCCSSCEEECSCTTTCC-EEEHHHHH
T ss_pred cCCCcCCCCCCCcEeEecCCCCCCC-cCcHHHHH
Confidence 3457 99876679999999988876 69999953
No 60
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.96 E-value=0.25 Score=35.17 Aligned_cols=48 Identities=21% Similarity=0.542 Sum_probs=28.0
Q ss_pred Ccee-ecCCCCC--CCcccccCCCCC--CcceecccCccCCCCCCceeCcCCcCc
Q psy12696 214 PTYC-VCQQVSY--GEMIGCDNPDCP--IEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 214 ~~~C-~C~~~~~--~~mi~Cd~~~c~--~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
...| +|..... ..+| --|.|. ..|||..|+.-...-.+...||.|+..
T Consensus 15 ~~~C~IC~~~~~~~~~l~--~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~ 67 (80)
T 2d8s_A 15 QDICRICHCEGDDESPLI--TPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYE 67 (80)
T ss_dssp SCCCSSSCCCCCSSSCEE--CSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCB
T ss_pred CCCCeEcCccccCCCeeE--eccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCe
Confidence 3456 8865432 3344 234454 268999999732222234689999754
No 61
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=86.90 E-value=10 Score=35.13 Aligned_cols=34 Identities=9% Similarity=0.114 Sum_probs=24.1
Q ss_pred HHHHHHHhhc-chHHHHHhHHHHHHHHHHHHHHHH
Q psy12696 6 LEQYLDSLDS-LPIELQRNFTLMRELDSRAQDVMK 39 (267)
Q Consensus 6 Ledfld~ie~-LP~El~r~l~~irelD~~~~~~~~ 39 (267)
|.+||...+. ||.+|+..-..+++|+....++..
T Consensus 25 i~d~L~k~e~~V~~~l~~LE~~l~elsn~ts~v~~ 59 (409)
T 1m1j_C 25 IADFFNKYRLTTDGELLEIEGLLQQATNSTGSIEY 59 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 6777777775 888888777777777666665443
No 62
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.13 E-value=1.6 Score=29.44 Aligned_cols=48 Identities=19% Similarity=0.486 Sum_probs=29.4
Q ss_pred CCCcee-ecCCCCCCCcccccCCCCCCcceecccCccCC-CCCCceeCcCCcCcc
Q psy12696 212 NEPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTT-KPKGKWYCPKCTSDR 264 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~-~p~~~w~C~~C~~~~ 264 (267)
.+...| +|.......++. .|. ..||..|+.-.. ...+...||.|+..-
T Consensus 18 ~~~~~C~IC~~~~~~~~~~--~Cg---H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 67 (73)
T 2ysl_A 18 QEEVICPICLDILQKPVTI--DCG---HNFCLKCITQIGETSCGFFKCPLCKTSV 67 (73)
T ss_dssp CCCCBCTTTCSBCSSEEEC--TTC---CEEEHHHHHHHCSSSCSCCCCSSSCCCC
T ss_pred ccCCEeccCCcccCCeEEc--CCC---ChhhHHHHHHHHHcCCCCCCCCCCCCcC
Confidence 345678 887764433222 443 469999987222 224567899998754
No 63
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=82.71 E-value=0.062 Score=50.69 Aligned_cols=11 Identities=36% Similarity=0.380 Sum_probs=9.6
Q ss_pred CCCcccccCCC
Q psy12696 224 YGEMIGCDNPD 234 (267)
Q Consensus 224 ~~~mi~Cd~~~ 234 (267)
++.||+||.|+
T Consensus 17 ~~~MIqCD~C~ 27 (447)
T 3kv4_A 17 TRFMIECDMCQ 27 (447)
T ss_dssp TSCEEECTTTC
T ss_pred CCCeEEcCCCC
Confidence 47899999987
No 64
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=79.87 E-value=8.4 Score=28.41 Aligned_cols=81 Identities=21% Similarity=0.407 Sum_probs=47.3
Q ss_pred HhhcchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q psy12696 12 SLDSLPIELQRNFTLMRELDSRAQDVMKTIDRVAEDYLDNMKHYSKDKKKETLAEIQKYFDKTKEYGDDKVQLAIQTYEM 91 (267)
Q Consensus 12 ~ie~LP~El~r~l~~irelD~~~~~~~~~i~~~~~~~~k~~~~~~~~~~~~~~~~I~~~~~~~~~lsdEKv~LA~~a~dl 91 (267)
...+||.|-++ +-|-.++.++..+|++.... ++-+..+...|.+--.++|.+-. ..++ .-
T Consensus 7 d~s~LPpeqRk-----kkL~~Ki~el~~ei~ke~~~-------------regl~Km~~vY~~nP~~GD~~s~-~~~L-~e 66 (98)
T 2ke4_A 7 DFSHLPPEQQR-----KRLQQQLEERSRELQKEVDQ-------------REALKKMKDVYEKTPQMGDPASL-EPQI-AE 66 (98)
T ss_dssp CSSSSCHHHHH-----HHHHHHHHHHHHHHHHHHHH-------------HTHHHHHHHHHHHCGGGCCGGGS-HHHH-HH
T ss_pred hhccCCHHHHH-----HHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHcCCccCCHHHH-HHHH-HH
Confidence 46789998653 33444444444444433222 24555677777777777766654 3333 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy12696 92 VDKYIRKLDTDLARFEQEIQE 112 (267)
Q Consensus 92 Vd~hirrLD~dl~~~e~el~~ 112 (267)
+..+|.+|..++.+|..-+.+
T Consensus 67 ~~~kid~L~~el~K~q~~L~e 87 (98)
T 2ke4_A 67 TLSNIERLKLEVQKYEAWLAE 87 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 466788888888777765443
No 65
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=77.89 E-value=45 Score=31.18 Aligned_cols=53 Identities=11% Similarity=0.172 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy12696 64 LAEIQKYFDKTKEYGDDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQEKALK 116 (267)
Q Consensus 64 ~~~I~~~~~~~~~lsdEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~~~~~~ 116 (267)
+.++...|.+=+.+-++||.---+-+.+|...|+.+=.+|.+||.++...++.
T Consensus 109 ~~e~S~eLe~ri~yIK~kVd~qi~~IrvLq~~l~~q~skIQRLE~dI~~q~~~ 161 (491)
T 1m1j_A 109 YGHVSTELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEMKRLEVDIDIKIRA 161 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444555554444566667777777778888888888776543
No 66
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=75.30 E-value=22 Score=26.13 Aligned_cols=83 Identities=14% Similarity=0.225 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHH
Q psy12696 25 TLMRELDSRAQDVMKTIDRVAEDYLDNMKHYSKDKKKETLAEIQKYFDKTKEYGDD----KVQLAIQTYEMVDKYIRKLD 100 (267)
Q Consensus 25 ~~irelD~~~~~~~~~i~~~~~~~~k~~~~~~~~~~~~~~~~I~~~~~~~~~lsdE----Kv~LA~~a~dlVd~hirrLD 100 (267)
.+....+..+..+..+|...+...-. ....++|...+.+|+..+++|.+|-+. .-.|-...--.+...+|.--
T Consensus 15 elFe~YE~df~~l~~~i~~kl~~i~~---~~~~e~rk~~i~~ie~~ldEA~eLl~qMelE~r~~p~s~R~~~~~klr~Yk 91 (102)
T 2qyw_A 15 EHFEKLHEIFRGLLEDLQGVPERLLG---TAGTEEKKKLVRDFDEKQQEANETLAEMEEELRYAPLTFRNPMMSKLRNYR 91 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT---CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc---cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 45556667777777777766665321 224477888888888888887766543 33333333444555566666
Q ss_pred HHHHHHHHHH
Q psy12696 101 TDLARFEQEI 110 (267)
Q Consensus 101 ~dl~~~e~el 110 (267)
.+|.+|..++
T Consensus 92 ~dL~~lk~el 101 (102)
T 2qyw_A 92 KDLAKLHREV 101 (102)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhc
Confidence 6666665543
No 67
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=74.48 E-value=1.6 Score=29.21 Aligned_cols=46 Identities=26% Similarity=0.441 Sum_probs=25.5
Q ss_pred CCcee-ecCCCCC-CCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 213 EPTYC-VCQQVSY-GEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 213 ~~~~C-~C~~~~~-~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
+...| +|..... +..+..-.|. ..||..|+.-.... ...||.|+..
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~---H~fc~~Ci~~~~~~--~~~CP~Cr~~ 60 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCM---HLFHQVCVDQWLIT--NKKCPICRVD 60 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTS---CEEEHHHHHHHHHH--CSBCTTTCSB
T ss_pred CCCCCeeCCccccCCCcEEEeCCC---CHHHHHHHHHHHHc--CCCCcCcCcc
Confidence 34567 8866532 3333333444 46999998621111 1359999865
No 68
>3lhp_S 4E10_D0_1ISEA_004_N (T93); epitope-scaffold, immune system; 2.70A {Artificial gene} PDB: 1y69_8
Probab=74.38 E-value=4.3 Score=31.23 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 79 DDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQ 111 (267)
Q Consensus 79 dEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~ 111 (267)
|+.-..-.++..+.|++|.++|.-++.-|.||.
T Consensus 89 De~k~~e~eIQKLTDkyIkkID~ll~~KEKEIm 121 (123)
T 3lhp_S 89 FDISQSLWDVQKLTDAAIKKIEAALADMEAWLT 121 (123)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455667788899999999999999998888875
No 69
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=73.44 E-value=3.1 Score=28.44 Aligned_cols=46 Identities=24% Similarity=0.426 Sum_probs=25.6
Q ss_pred CCcee-ecCCCCC-CCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 213 EPTYC-VCQQVSY-GEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 213 ~~~~C-~C~~~~~-~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
+...| +|..... +..+.--.|. ..||..|+.-... ....||.|+..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~---H~fc~~Ci~~~~~--~~~~CP~Cr~~ 61 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQLPCN---HLFHDSCIVPWLE--QHDSCPVCRKS 61 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEECTTS---CEEETTTTHHHHT--TTCSCTTTCCC
T ss_pred CCCCCeeCCccccCCCCEEEeCCC---CeecHHHHHHHHH--cCCcCcCcCCc
Confidence 34567 8876533 2222111333 4699999972111 12579999765
No 70
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.06 E-value=1.5 Score=30.67 Aligned_cols=48 Identities=15% Similarity=0.211 Sum_probs=28.1
Q ss_pred CCCcee-ecCCCCCC-C--cccccCCCCCCcceecccCccC-CCCCCceeCcCCcCc
Q psy12696 212 NEPTYC-VCQQVSYG-E--MIGCDNPDCPIEWFHFACVSLT-TKPKGKWYCPKCTSD 263 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~-~--mi~Cd~~~c~~~wfH~~Cv~l~-~~p~~~w~C~~C~~~ 263 (267)
.+...| +|...... . .+.- .|. ..||..|+.-. ....+...||.|+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~-~Cg---H~fC~~Ci~~~~~~~~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLL-HCG---HTICRQCLEKLLASSINGVRCPFCSKI 65 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEEC-SSS---CEEEHHHHHHHHHHCSSCBCCTTTCCC
T ss_pred cCCCCCccCCccccccCCCeEEC-CCC---ChhhHHHHHHHHHcCCCCcCCCCCCCc
Confidence 345568 88776432 1 2222 333 47999998721 112345789999864
No 71
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=72.98 E-value=52 Score=30.04 Aligned_cols=25 Identities=8% Similarity=0.173 Sum_probs=11.0
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 21 QRNFTLMRELDSRAQDVMKTIDRVA 45 (267)
Q Consensus 21 ~r~l~~irelD~~~~~~~~~i~~~~ 45 (267)
+..|..+.+.|..+.++..+|++++
T Consensus 98 k~~~~q~~dndn~~~e~s~eLe~~i 122 (390)
T 1deq_A 98 RGDFAKANNNDNTFKQINEDLRSRI 122 (390)
T ss_pred HHHHHhhccchHHHHHHHHHHHHHH
Confidence 3333444444444444444444443
No 72
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=71.55 E-value=19 Score=26.21 Aligned_cols=35 Identities=9% Similarity=0.132 Sum_probs=10.6
Q ss_pred hhhHHHHHHHHhhcchHHHHHhHHHHHHHHHHHHHHHHH
Q psy12696 2 STSYLEQYLDSLDSLPIELQRNFTLMRELDSRAQDVMKT 40 (267)
Q Consensus 2 ~~~yLedfld~ie~LP~El~r~l~~irelD~~~~~~~~~ 40 (267)
++.|-+.++..| ||. .......+.|-.++.++..+
T Consensus 4 t~~Yh~~wi~~l--~~~--s~~a~~~~~lk~E~~~lk~E 38 (93)
T 3sjb_C 4 TNKYHEKWISKF--APG--NELSKKYLAKVKERHELKEF 38 (93)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHH--ccC--cHhHHHHHHHHHHHHHHHHH
Confidence 466888888888 775 55555666655555555444
No 73
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=70.64 E-value=1.3 Score=30.30 Aligned_cols=47 Identities=13% Similarity=0.466 Sum_probs=27.8
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
+...| +|.......++ -..|. ..||..|+.-.....+...||.|+..
T Consensus 14 ~~~~C~IC~~~~~~p~~-~~~Cg---H~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 14 DELLCLICKDIMTDAVV-IPCCG---NSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp GGGSCSSSCCCCTTCEE-CSSSC---CEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred CCCCCcCCChHHhCCeE-cCCCC---CHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 45567 99776443322 22233 46999998622221234689999875
No 74
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.19 E-value=2.6 Score=28.49 Aligned_cols=45 Identities=22% Similarity=0.401 Sum_probs=25.0
Q ss_pred Ccee-ecCCCCC-CCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 214 PTYC-VCQQVSY-GEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 214 ~~~C-~C~~~~~-~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
...| +|..... +..+.--.|. ..||..|+.-.... ...||.|+..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~---H~f~~~Ci~~~~~~--~~~CP~Cr~~ 61 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCK---HAFHRKCLIKWLEV--RKVCPLCNMP 61 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTT---EEEEHHHHHHHHHH--CSBCTTTCCB
T ss_pred CCCCcCCCcccCCCCcEEEcCCC---CEecHHHHHHHHHc--CCcCCCcCcc
Confidence 4467 8877643 3333111333 56999998621111 1279999764
No 75
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.16 E-value=2.4 Score=27.70 Aligned_cols=44 Identities=20% Similarity=0.529 Sum_probs=25.7
Q ss_pred CCCcee-ecCCCCCCCcccccCCCCCCcceecccCccCC-CCCCceeCcCC
Q psy12696 212 NEPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTT-KPKGKWYCPKC 260 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~-~p~~~w~C~~C 260 (267)
.+...| +|........+. .|. ..||..|+.-.. ...+...||.|
T Consensus 18 ~~~~~C~IC~~~~~~p~~~--~Cg---H~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQKPVTI--DCG---HNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSSCEEC--TTS---SEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhCCeEEe--CCC---CcchHHHHHHHHHcCCCCCcCcCC
Confidence 345668 897765443332 443 469999987211 12245678887
No 76
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.81 E-value=2.3 Score=29.24 Aligned_cols=47 Identities=23% Similarity=0.477 Sum_probs=28.0
Q ss_pred CCCcee-ecCCCCCCCcccccCCCCCCcceecccCcc--CC--CCCCceeCcCCcCc
Q psy12696 212 NEPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSL--TT--KPKGKWYCPKCTSD 263 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l--~~--~p~~~w~C~~C~~~ 263 (267)
.+...| +|.......++. .|. ..||..|+.. .. ...+...||.|+..
T Consensus 17 ~~~~~C~IC~~~~~~p~~~--~Cg---H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecv_A 17 KEEVTCPICLELLTQPLSL--DCG---HSFCQACLTANHKKSMLDKGESSCPVCRIS 68 (85)
T ss_dssp CCCCCCTTTCSCCSSCBCC--SSS---CCBCTTHHHHHHHHHHHTTSCCCCTTTCCS
T ss_pred cCCCCCCCCCcccCCceeC--CCC---CHHHHHHHHHHHHHhhcCCCCCcCCCCCCc
Confidence 345668 887764433222 333 4699999862 11 12346789999764
No 77
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=69.09 E-value=40 Score=31.61 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 78 GDDKVQLAIQTYEMVDKYIRKLDTDLARFEQE 109 (267)
Q Consensus 78 sdEKv~LA~~a~dlVd~hirrLD~dl~~~e~e 109 (267)
...-|.+-+.+++.+...|.+|+.++..++..
T Consensus 161 ~~~~i~~l~~~~~~~~~~i~~l~~~~~~~~~~ 192 (461)
T 3ghg_B 161 IPTNLRVLRSILENLRSKIQKLESDVSAQMEY 192 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 45556677777777777777777777766543
No 78
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.07 E-value=4 Score=25.90 Aligned_cols=42 Identities=26% Similarity=0.564 Sum_probs=24.6
Q ss_pred CCcee-ecCCCCCCC-cccccCCCCCCcceecccCccCCC-CCCceeCcCC
Q psy12696 213 EPTYC-VCQQVSYGE-MIGCDNPDCPIEWFHFACVSLTTK-PKGKWYCPKC 260 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~-mi~Cd~~~c~~~wfH~~Cv~l~~~-p~~~w~C~~C 260 (267)
+...| +|....... ++.| . ..||..|+.-... ......||.|
T Consensus 14 ~~~~C~IC~~~~~~p~~~~C---g---H~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPVIIEC---G---HNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCCCCSS---C---CCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccCccEeCCC---C---CccCHHHHHHHHHhcCCCCCCCCC
Confidence 45567 887765433 3333 3 3599999872211 1345778887
No 79
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.94 E-value=3.5 Score=27.75 Aligned_cols=43 Identities=19% Similarity=0.374 Sum_probs=25.3
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
...| +|....... +.. .|. ..||..|+.-... ....||.|+..
T Consensus 15 ~~~C~IC~~~~~~~-~~~-~Cg---H~fC~~Ci~~~~~--~~~~CP~Cr~~ 58 (71)
T 2d8t_A 15 VPECAICLQTCVHP-VSL-PCK---HVFCYLCVKGASW--LGKRCALCRQE 58 (71)
T ss_dssp CCBCSSSSSBCSSE-EEE-TTT---EEEEHHHHHHCTT--CSSBCSSSCCB
T ss_pred CCCCccCCcccCCC-EEc-cCC---CHHHHHHHHHHHH--CCCcCcCcCch
Confidence 4567 887664332 222 344 4699999862111 12689999865
No 80
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=68.83 E-value=32 Score=25.23 Aligned_cols=74 Identities=8% Similarity=0.135 Sum_probs=44.5
Q ss_pred hhHHHHHHHHhhcchHHHHHhHHHHHHH---HHHHHHH------HHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHH
Q psy12696 3 TSYLEQYLDSLDSLPIELQRNFTLMREL---DSRAQDV------MKTIDRVAEDYLDNMKHYSKDKKKETLAEIQKYFDK 73 (267)
Q Consensus 3 ~~yLedfld~ie~LP~El~r~l~~irel---D~~~~~~------~~~i~~~~~~~~k~~~~~~~~~~~~~~~~I~~~~~~ 73 (267)
+..|+.|-+.+..|=.+|.+.+..|..+ +.+-+.+ +++.+..+.+.--...++++..|.....+|+..-..
T Consensus 14 SelFe~YE~df~~l~~~i~~kl~~i~~~~~~e~rk~~i~~ie~~ldEA~eLl~qMelE~r~~p~s~R~~~~~klr~Yk~d 93 (102)
T 2qyw_A 14 SEHFEKLHEIFRGLLEDLQGVPERLLGTAGTEEKKKLVRDFDEKQQEANETLAEMEEELRYAPLTFRNPMMSKLRNYRKD 93 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 3588889888999999999999988655 4433322 122233333322223456677777666666654444
Q ss_pred HHH
Q psy12696 74 TKE 76 (267)
Q Consensus 74 ~~~ 76 (267)
+..
T Consensus 94 L~~ 96 (102)
T 2qyw_A 94 LAK 96 (102)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 81
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=66.55 E-value=6.1 Score=28.44 Aligned_cols=46 Identities=26% Similarity=0.482 Sum_probs=33.6
Q ss_pred CceeecCCC-CC------CCcccccCCCCCCcceecccCccCCCCCCceeCcCCcC
Q psy12696 214 PTYCVCQQV-SY------GEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTS 262 (267)
Q Consensus 214 ~~~C~C~~~-~~------~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~ 262 (267)
...|+|.+. .+ =.||.|..|. ..--|..|..+.. ....|.|..|..
T Consensus 26 A~~Clc~~GR~~~~~~~~W~L~lC~~Cg--s~gtH~~Cs~l~~-~~~~weC~~C~~ 78 (85)
T 1weq_A 26 APICLYEQGRDSFEDEGRWRLILCATCG--SHGTHRDCSSLRP-NSKKWECNECLP 78 (85)
T ss_dssp CSCCCSTTCSSCCBSSSTTBCEECSSSC--CCEECSGGGTCCT-TCSCCCCTTTSC
T ss_pred ccccCCCCCcccccCCCCEEEEeCcccC--CchhHHHHhCCcC-CCCCEECCcCcc
Confidence 456888654 22 2489999954 6779999998843 456799999974
No 82
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=65.81 E-value=6.6 Score=26.80 Aligned_cols=47 Identities=23% Similarity=0.538 Sum_probs=28.0
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccCc--cCCC--CCCceeCcCCcCcc
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS--LTTK--PKGKWYCPKCTSDR 264 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~--l~~~--p~~~w~C~~C~~~~ 264 (267)
+...| +|.......++ . .|. ..||..|+. +... ..+...||.|+..-
T Consensus 18 ~~~~C~IC~~~~~~p~~-~-~Cg---H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecw_A 18 EEVTCPICLELLKEPVS-A-DCN---HSFCRACITLNYESNRNTDGKGNCPVCRVPY 69 (85)
T ss_dssp TTTSCTTTCSCCSSCEE-C-TTS---CCBCHHHHHHHHHHSBCTTSCBCCTTTCCCC
T ss_pred cCCCCcCCChhhCccee-C-CCC---CHHHHHHHHHHHHhccCCCCCCCCCCCCCcC
Confidence 45578 88776443332 1 233 359999986 2221 23578999998653
No 83
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=65.39 E-value=18 Score=34.38 Aligned_cols=25 Identities=16% Similarity=0.276 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 80 DKVQLAIQTYEMVDKYIRKLDTDLA 104 (267)
Q Consensus 80 EKv~LA~~a~dlVd~hirrLD~dl~ 104 (267)
..|++-+..++-+-..|.|||.||.
T Consensus 131 snIrvLQsnLedq~~kIQRLEvDId 155 (562)
T 3ghg_A 131 QHIQLLQKNVRAQLVDMKRLEVDID 155 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555555777777664
No 84
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.02 E-value=1.8 Score=29.57 Aligned_cols=46 Identities=30% Similarity=0.514 Sum_probs=26.9
Q ss_pred CCcee-ecCCCC-CCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 213 EPTYC-VCQQVS-YGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 213 ~~~~C-~C~~~~-~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
+...| +|.... .+..+..-.|. ..||..|+.-... ....||.|+..
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~---H~fh~~Ci~~w~~--~~~~CP~Cr~~ 69 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCN---HEFHAKCVDKWLK--ANRTCPICRAD 69 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTT---EEEETTHHHHHHH--HCSSCTTTCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCC---CHhHHHHHHHHHH--cCCcCcCcCCc
Confidence 45567 887653 24433333444 4699999862111 12479999865
No 85
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=65.02 E-value=55 Score=26.70 Aligned_cols=48 Identities=17% Similarity=0.300 Sum_probs=38.3
Q ss_pred hhHHHHHHHHhhcchHHHHHhH--HHH-HHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 3 TSYLEQYLDSLDSLPIELQRNF--TLM-RELDSRAQDVMKTIDRVAEDYLD 50 (267)
Q Consensus 3 ~~yLedfld~ie~LP~El~r~l--~~i-relD~~~~~~~~~i~~~~~~~~k 50 (267)
...|.+|++.+.+-=.+++..| +.| ++++....+.+..+...+..+..
T Consensus 30 ~~~~~~y~~~l~~~a~~~~eqL~~s~l~~el~~l~~e~~~~l~~~~~~l~~ 80 (191)
T 1nfn_A 30 LGRFWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEE 80 (191)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467888888888888888888 777 89999999988888876666554
No 86
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.85 E-value=3 Score=28.79 Aligned_cols=45 Identities=18% Similarity=0.409 Sum_probs=26.4
Q ss_pred CCCcee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 212 NEPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
.+...| +|.......++ -.|. ..||..|+.-... ....||.|+..
T Consensus 13 ~~~~~C~IC~~~~~~p~~--~~Cg---H~fC~~Ci~~~~~--~~~~CP~Cr~~ 58 (81)
T 2csy_A 13 EIPFRCFICRQAFQNPVV--TKCR---HYFCESCALEHFR--ATPRCYICDQP 58 (81)
T ss_dssp CCCSBCSSSCSBCCSEEE--CTTS---CEEEHHHHHHHHH--HCSBCSSSCCB
T ss_pred CCCCCCcCCCchhcCeeE--ccCC---CHhHHHHHHHHHH--CCCcCCCcCcc
Confidence 345668 89776443322 2333 4699999862111 13579999764
No 87
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=63.60 E-value=4.4 Score=30.41 Aligned_cols=44 Identities=23% Similarity=0.423 Sum_probs=29.2
Q ss_pred CCCCcee---ecCCCCCCCcccccCCCCCCcceecccCc--cCCCCCCceeC
Q psy12696 211 PNEPTYC---VCQQVSYGEMIGCDNPDCPIEWFHFACVS--LTTKPKGKWYC 257 (267)
Q Consensus 211 ~~~~~~C---~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~~w~C 257 (267)
|....|| .|..-....-+.|.. ||.. ||..|+. |...+.+.|+|
T Consensus 50 P~g~W~Cp~c~C~~C~k~~~~~C~~--Cp~s-fC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 50 PYGKWECPWHQCDECSSAAVSFCEF--CPHS-FCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp CSSCCCCGGGBCTTTCSBCCEECSS--SSCE-ECTTTCTTSCEECTTTTCEE
T ss_pred CCCCEECCCCCCCcCCCCCCcCcCC--CCcc-hhhhccCCcceecCCCCcee
Confidence 3445666 332222122378888 7776 9999998 66777888998
No 88
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.46 E-value=3.4 Score=27.30 Aligned_cols=46 Identities=15% Similarity=0.317 Sum_probs=27.7
Q ss_pred CCCcee-ecCCCCCCC-cccccCCCCCCcceecccCccCCCCCCceeCcCCcCcc
Q psy12696 212 NEPTYC-VCQQVSYGE-MIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSDR 264 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~~-mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~~ 264 (267)
.+...| +|....... ++ .|. ..||..|+.-... .+...||.|+..-
T Consensus 13 ~~~~~C~IC~~~~~~p~~~---~Cg---H~fC~~Ci~~~~~-~~~~~CP~Cr~~~ 60 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPKQT---ECG---HRFCESCMAALLS-SSSPKCTACQESI 60 (66)
T ss_dssp CCCEECTTTCCEESSCCCC---SSS---CCCCHHHHHHHHT-TSSCCCTTTCCCC
T ss_pred CcCCCCCCCChHhcCeeEC---CCC---CHHHHHHHHHHHH-hCcCCCCCCCcCC
Confidence 445678 887764332 33 333 3599999872211 3346799998754
No 89
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.28 E-value=5.8 Score=27.63 Aligned_cols=46 Identities=24% Similarity=0.680 Sum_probs=27.5
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
...| +|...-.. -+.|.. |... ||..|+.---.....=.||.|...
T Consensus 15 i~~C~IC~~~i~~-g~~C~~--C~h~-fH~~Ci~kWl~~~~~~~CP~Cr~~ 61 (74)
T 2ct0_A 15 VKICNICHSLLIQ-GQSCET--CGIR-MHLPCVAKYFQSNAEPRCPHCNDY 61 (74)
T ss_dssp SCBCSSSCCBCSS-SEECSS--SCCE-ECHHHHHHHSTTCSSCCCTTTCSC
T ss_pred CCcCcchhhHccc-CCccCC--CCch-hhHHHHHHHHHhcCCCCCCCCcCc
Confidence 4457 88877432 245665 4444 999999822222223469999754
No 90
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=63.25 E-value=31 Score=27.35 Aligned_cols=95 Identities=15% Similarity=0.194 Sum_probs=43.6
Q ss_pred HHHhhcchHHHHHhHHHHHHH-HHH-HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy12696 10 LDSLDSLPIELQRNFTLMREL-DSR-AQDVMKTIDRVAEDYLDNMKHYSKDKKKETLAEIQKYFDKTKEYGDDKVQLAIQ 87 (267)
Q Consensus 10 ld~ie~LP~El~r~l~~irel-D~~-~~~~~~~i~~~~~~~~k~~~~~~~~~~~~~~~~I~~~~~~~~~lsdEKv~LA~~ 87 (267)
-+.|.+||.||+.-- .|..| |.. ...+..++++.+..+-...+.+..+ .+....+...+..+.....+-+.-+..
T Consensus 45 rq~Ia~LP~eVsd~s-~l~klkDk~~~e~l~~~veeA~~~L~eYn~rL~~E--~~dR~~L~~~L~~~~~~~~~~l~e~e~ 121 (152)
T 4fla_A 45 RQKIASLPQEVQDVS-LLEKITDKEAAERLSKTVDEACLLLAEYNGRLAAE--LEDRRQLARMLVEYTQNQKDVLSEKEK 121 (152)
T ss_dssp HHHHHTSCGGGTCGG-GGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCccccCHH-HHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356788888877532 23222 333 3444444444333222211122211 122233445555555555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy12696 88 TYEMVDKYIRKLDTDLARFE 107 (267)
Q Consensus 88 a~dlVd~hirrLD~dl~~~e 107 (267)
.++-..+...|+.+.-.+++
T Consensus 122 ~leeyK~Kl~rv~~vkkeL~ 141 (152)
T 4fla_A 122 KLEEYKQKLARVTQVRKELK 141 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 55555555555444444443
No 91
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=62.93 E-value=5.5 Score=27.02 Aligned_cols=47 Identities=21% Similarity=0.426 Sum_probs=27.5
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccCcc--CCC---CCCceeCcCCcCcc
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSL--TTK---PKGKWYCPKCTSDR 264 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l--~~~---p~~~w~C~~C~~~~ 264 (267)
+...| +|.......++. .|. ..||..|+.- ... ..+...||.|+..-
T Consensus 11 ~~~~C~IC~~~~~~p~~l--~Cg---H~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~ 63 (79)
T 2egp_A 11 EEVTCPICLELLTEPLSL--DCG---HSLCRACITVSNKEAVTSMGGKSSCPVCGISY 63 (79)
T ss_dssp CCCEETTTTEECSSCCCC--SSS---CCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCC
T ss_pred cCCCCcCCCcccCCeeEC--CCC---CHHHHHHHHHHHHhcccCCCCCCcCCCCCCcC
Confidence 45668 887664332221 233 3589999872 221 13468899998653
No 92
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.29 E-value=5.4 Score=26.16 Aligned_cols=49 Identities=20% Similarity=0.426 Sum_probs=27.3
Q ss_pred CCcee-ecCCCCC-----CCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCcccC
Q psy12696 213 EPTYC-VCQQVSY-----GEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSDRKK 266 (267)
Q Consensus 213 ~~~~C-~C~~~~~-----~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~~~~ 266 (267)
+...| +|..... +.++..-.|. ..||..|+.-... ....||.|+..-.+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~~~~Cg---H~fc~~Ci~~~~~--~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIVSTECG---HVFCSQCLRDSLK--NANTCPTCRKKINH 68 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEEECSSS---CEEEHHHHHHHHH--HCSSCTTTCCCCCC
T ss_pred CCCCCcccCccccccccccCCeEeCCCC---ChhcHHHHHHHHH--cCCCCCCCCCccCc
Confidence 34567 8876522 2222333433 4699999862110 02369999876544
No 93
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=61.78 E-value=54 Score=25.44 Aligned_cols=101 Identities=11% Similarity=0.202 Sum_probs=64.5
Q ss_pred hhcchHHHHHhHHHHHHHHHHHHHHHHHHHHH---HHHH---H---HhcCCCC-hhHHH------------------HHH
Q psy12696 13 LDSLPIELQRNFTLMRELDSRAQDVMKTIDRV---AEDY---L---DNMKHYS-KDKKK------------------ETL 64 (267)
Q Consensus 13 ie~LP~El~r~l~~irelD~~~~~~~~~i~~~---~~~~---~---k~~~~~~-~~~~~------------------~~~ 64 (267)
+.++|.+++.....+..++...+.+...+... ..++ . .....+. ..... ..+
T Consensus 4 m~~~~~~l~ql~~~~qql~~~~~~l~~~~~~L~~a~~~~~e~~~~l~~l~~l~~~~~~ilvplg~~~yv~g~i~~~~~V~ 83 (151)
T 2zdi_C 4 MAQNNKELEKLAYEYQVLQAQAQILAQNLELLNLAKAEVQTVRETLENLKKIEEEKPEILVPIGAGSFLKGVIVDKNNAI 83 (151)
T ss_dssp CCSSTTHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCEEEEECSSSCEEEEECSCTTEEE
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEcCCCeEEEEEECCCCEEE
Confidence 44677777777777777777777666665544 2222 1 1111111 00000 000
Q ss_pred ------HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 65 ------AEIQKYFDKTKEYGDDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQEK 113 (267)
Q Consensus 65 ------~~I~~~~~~~~~lsdEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~~~ 113 (267)
--+...+.+|.++-++|+..+....+-++..+..+...+..++..+..-
T Consensus 84 v~lG~g~~vE~~~~eA~~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~l 138 (151)
T 2zdi_C 84 VSVGSGYAVERSIDEAISFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEV 138 (151)
T ss_dssp EEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred EEeCCCeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0134567889999999999999999999999999999888888777654
No 94
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=61.46 E-value=3.8 Score=29.18 Aligned_cols=46 Identities=24% Similarity=0.483 Sum_probs=26.6
Q ss_pred CCcee-ecCCCC-CCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 213 EPTYC-VCQQVS-YGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 213 ~~~~C-~C~~~~-~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
+...| +|.... .+..+..-.|. ..||..|+.-... ....||.|+..
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~C~---H~Fh~~Ci~~wl~--~~~~CP~Cr~~ 86 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELPCH---HYFHKPCVSIWLQ--KSGTCPVCRCM 86 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEETTT---EEEEHHHHHHHHT--TTCBCTTTCCB
T ss_pred CCCCCcccChhhcCCCcEEecCCC---ChHHHHHHHHHHH--cCCcCcCcCcc
Confidence 34567 887553 23333223344 4699999872111 12489999865
No 95
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=60.38 E-value=37 Score=28.46 Aligned_cols=98 Identities=16% Similarity=0.252 Sum_probs=54.5
Q ss_pred HHHHHHHHhhcchHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCChhH-------HHHHHHHHHHHHHHHHH
Q psy12696 5 YLEQYLDSLDSLPIELQRNFTLMRELDS-RAQDVMKTIDRVAEDYLDNMKHYSKDK-------KKETLAEIQKYFDKTKE 76 (267)
Q Consensus 5 yLedfld~ie~LP~El~r~l~~irelD~-~~~~~~~~i~~~~~~~~k~~~~~~~~~-------~~~~~~~I~~~~~~~~~ 76 (267)
.|+.|+..+.+=|....+.|.-++-+=. .-.+.+..|. .|- .....++.. -...|..|...+..++.
T Consensus 104 Ale~y~~ALq~~pp~~~~il~aLk~yirae~KDR~Hti~----hy~-Hv~~~dpe~A~~~k~~v~~hL~~id~r~NqsL~ 178 (211)
T 3umh_A 104 ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK----HFE-HVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLS 178 (211)
T ss_dssp HHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHH----HHH-HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHH----HHH-HHHcCCHHHHHhcchHHHHHHHHHHHHHhHhHH
Confidence 5788999999999888888877765421 1122222222 221 111223321 11345667788888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 77 YGDDKVQLAIQTYEMVDKYIRKLDTDLARFE 107 (267)
Q Consensus 77 lsdEKv~LA~~a~dlVd~hirrLD~dl~~~e 107 (267)
+...==.|+..+.+.|+..+.+.+.+...|+
T Consensus 179 lL~~~P~l~~~i~~~~~e~l~~~~~~~~~~~ 209 (211)
T 3umh_A 179 LLYNVPAVAEEIQDEVDELLQKEQNYSDDIE 209 (211)
T ss_dssp GGGGSHHHHHHHHHHHHHHHC----------
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHhccchhhc
Confidence 8777777888888888777777776665554
No 96
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=59.36 E-value=33 Score=28.71 Aligned_cols=33 Identities=33% Similarity=0.325 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 79 DDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQ 111 (267)
Q Consensus 79 dEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~ 111 (267)
|+--..-.++..+.|++|.++|.-++.-|.||.
T Consensus 175 De~k~~e~eiQklTd~~i~~iD~~l~~KEkEim 207 (209)
T 4gfq_A 175 DDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIM 207 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455555678889999999999999998888874
No 97
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=59.35 E-value=14 Score=34.26 Aligned_cols=27 Identities=19% Similarity=0.254 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 80 DKVQLAIQTYEMVDKYIRKLDTDLARF 106 (267)
Q Consensus 80 EKv~LA~~a~dlVd~hirrLD~dl~~~ 106 (267)
+.|...+..++..+..|..|...+..+
T Consensus 105 ~~i~~l~~~~~~~~~~i~~l~~~i~~l 131 (409)
T 1m1j_C 105 NTIQQLTDMHIMNSNKITQLKQKIAQL 131 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 344444444444444444444444333
No 98
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=59.31 E-value=3.5 Score=23.96 Aligned_cols=11 Identities=36% Similarity=1.008 Sum_probs=9.2
Q ss_pred CCceeCcCCcC
Q psy12696 252 KGKWYCPKCTS 262 (267)
Q Consensus 252 ~~~w~C~~C~~ 262 (267)
.|+|+|+.|..
T Consensus 3 ~gDW~C~~C~~ 13 (32)
T 2lk0_A 3 FEDWLCNKCCL 13 (32)
T ss_dssp CSEEECTTTCC
T ss_pred CCCCCcCcCcC
Confidence 58999999964
No 99
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=59.28 E-value=6 Score=36.05 Aligned_cols=50 Identities=30% Similarity=0.660 Sum_probs=29.6
Q ss_pred CCcee-ecCCC--CCCCc--ccccCCCCCCcceecccCcc--CCCC-------CCceeCcCCcCc
Q psy12696 213 EPTYC-VCQQV--SYGEM--IGCDNPDCPIEWFHFACVSL--TTKP-------KGKWYCPKCTSD 263 (267)
Q Consensus 213 ~~~~C-~C~~~--~~~~m--i~Cd~~~c~~~wfH~~Cv~l--~~~p-------~~~w~C~~C~~~ 263 (267)
...-| +|-.. ..|.+ ..|++..|... ||..|+-- ...+ .-.--||.|+..
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~-FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLK-CHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCC-BCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred CCccCcccceeecCCCCCccccccCCccCCc-cchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 34455 66443 22443 46997778775 99999952 1111 112359999864
No 100
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=58.71 E-value=4 Score=25.66 Aligned_cols=44 Identities=18% Similarity=0.380 Sum_probs=24.8
Q ss_pred cee-ecCCCCC--CCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 215 TYC-VCQQVSY--GEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 215 ~~C-~C~~~~~--~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
..| +|..... +..+..-.|. ..||..|+.-.... ...||.|+..
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~Cg---H~fc~~Ci~~~~~~--~~~CP~Cr~~ 52 (55)
T 2ecm_A 6 SGCPICLEDIHTSRVVAHVLPCG---HLLHRTCYEEMLKE--GYRCPLCSGP 52 (55)
T ss_dssp CSCTTTCCCCCTTTSCEEECTTS---CEEETTHHHHHHHH--TCCCTTSCCS
T ss_pred CcCcccChhhcCCCcCeEecCCC---CcccHHHHHHHHHc--CCcCCCCCCc
Confidence 346 7766532 2333334444 46999998621110 1579999764
No 101
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=58.48 E-value=5.3 Score=25.08 Aligned_cols=44 Identities=27% Similarity=0.407 Sum_probs=24.7
Q ss_pred cee-ecCCCCC-CC-cccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 215 TYC-VCQQVSY-GE-MIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 215 ~~C-~C~~~~~-~~-mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
..| +|..... ++ .+....|. ..||..|+.-... ....||.|+..
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~---H~f~~~Ci~~w~~--~~~~CP~Cr~~ 52 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCG---HGFHAECVDMWLG--SHSTCPLCRLT 52 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSC---CEECTTHHHHTTT--TCCSCSSSCCC
T ss_pred CcCccCCccccCCCceEECCCCC---CcccHHHHHHHHH--cCCcCcCCCCE
Confidence 456 7766532 22 22222344 4699999862211 23579999864
No 102
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=58.01 E-value=3.7 Score=30.29 Aligned_cols=26 Identities=27% Similarity=0.685 Sum_probs=17.6
Q ss_pred cceecccCc--cCCC-CCCceeCcCCcCc
Q psy12696 238 EWFHFACVS--LTTK-PKGKWYCPKCTSD 263 (267)
Q Consensus 238 ~wfH~~Cv~--l~~~-p~~~w~C~~C~~~ 263 (267)
.+||..|+. +... +.....||.|+..
T Consensus 63 H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~ 91 (114)
T 1v87_A 63 HAFHLLCLLAMYCNGNKDGSLQCPSCKTI 91 (114)
T ss_dssp CEECHHHHHHHHHHTCCSSCCBCTTTCCB
T ss_pred CcccHHHHHHHHHcccCCCCCcCCCCCCc
Confidence 479999997 3211 1345689999764
No 103
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=57.18 E-value=72 Score=25.41 Aligned_cols=55 Identities=15% Similarity=0.309 Sum_probs=40.1
Q ss_pred hHHHHHHHHhhcchHHHHHhH--HHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCChh
Q psy12696 4 SYLEQYLDSLDSLPIELQRNF--TLM-RELDSRAQDVMKTIDRVAEDYLDNMKHYSKD 58 (267)
Q Consensus 4 ~yLedfld~ie~LP~El~r~l--~~i-relD~~~~~~~~~i~~~~~~~~k~~~~~~~~ 58 (267)
..+-+|+.-+.+-=.+...+| +.+ ++|+.++.+.+.++...+..+.....-++.+
T Consensus 31 ~~~w~Y~~q~~~~a~~~v~ql~~sel~qel~~~l~~~ld~l~~~~~~l~~~L~P~t~e 88 (165)
T 1gs9_A 31 GRFWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEEQLTPVAEE 88 (165)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCSH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH
Confidence 456777777776655555544 366 9999999999999998888887766655543
No 104
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=56.74 E-value=4.2 Score=34.80 Aligned_cols=45 Identities=22% Similarity=0.625 Sum_probs=29.6
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcC
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTS 262 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~ 262 (267)
...| +|...-. .-+.|.+|. . -||..|+.--....+.--||.|..
T Consensus 180 i~~C~iC~~iv~-~g~~C~~C~--~-~~H~~C~~~~~~~~~~~~CP~C~~ 225 (238)
T 3nw0_A 180 VKICNICHSLLI-QGQSCETCG--I-RMHLPCVAKYFQSNAEPRCPHCND 225 (238)
T ss_dssp CCBCTTTCSBCS-SCEECSSSC--C-EECHHHHHHHTTTCSSCBCTTTCC
T ss_pred CCcCcchhhHHh-CCcccCccC--h-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 4567 9987743 127788854 4 499999974323334467999964
No 105
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=56.06 E-value=1.3e+02 Score=28.11 Aligned_cols=8 Identities=25% Similarity=0.858 Sum_probs=4.8
Q ss_pred cceecccC
Q psy12696 238 EWFHFACV 245 (267)
Q Consensus 238 ~wfH~~Cv 245 (267)
.|.+..|-
T Consensus 405 GWWy~~C~ 412 (464)
T 1m1j_B 405 GWWYNRCH 412 (464)
T ss_dssp CBCCSSBC
T ss_pred CEeCCCCC
Confidence 46556674
No 106
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=55.87 E-value=43 Score=27.45 Aligned_cols=33 Identities=30% Similarity=0.440 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 79 DDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQ 111 (267)
Q Consensus 79 dEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~ 111 (267)
|+--..-..+..+.|+++.++|.-++.-|.|+.
T Consensus 151 D~~k~~e~~iQkltd~~i~~id~~~~~KEkEim 183 (185)
T 1dd5_A 151 DDAKRLENEIQKLTDEFIEKLDEVFEIKKEEIM 183 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555556677888889999999999988888774
No 107
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=55.81 E-value=1.3e+02 Score=28.07 Aligned_cols=18 Identities=11% Similarity=0.265 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy12696 87 QTYEMVDKYIRKLDTDLA 104 (267)
Q Consensus 87 ~a~dlVd~hirrLD~dl~ 104 (267)
..++-+-..|.||+.++.
T Consensus 139 ~~l~~q~skIQRLE~dI~ 156 (491)
T 1m1j_A 139 NSIQEQVVEMKRLEVDID 156 (491)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333345677777664
No 108
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=55.33 E-value=47 Score=27.20 Aligned_cols=33 Identities=27% Similarity=0.364 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 79 DDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQ 111 (267)
Q Consensus 79 dEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~ 111 (267)
|+--..-..+..+.|+++.++|.-++.-|.|+.
T Consensus 151 D~~k~~e~~iQkltd~~i~~id~~~~~KEkEim 183 (185)
T 1ise_A 151 DDDRRSQDDVQKLTDAAIKKIEAALADKEAELM 183 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555556677888889999999999998888875
No 109
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=54.36 E-value=45 Score=27.29 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 79 DDKVQLAIQTYEMVDKYIRKLDTDLARFEQEI 110 (267)
Q Consensus 79 dEKv~LA~~a~dlVd~hirrLD~dl~~~e~el 110 (267)
|+--..-..+..+.|+++.++|.-++.-|.|+
T Consensus 152 D~~k~~e~~iQkltd~~i~~id~~~~~KEkEi 183 (185)
T 1eh1_A 152 DETKRAEAEIQKITDEFIAKADQLAEKKEQEI 183 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556667788888999999999998888776
No 110
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=54.21 E-value=1.4e+02 Score=27.90 Aligned_cols=7 Identities=14% Similarity=0.316 Sum_probs=2.6
Q ss_pred HHHHHHH
Q psy12696 25 TLMRELD 31 (267)
Q Consensus 25 ~~irelD 31 (267)
..|+.|.
T Consensus 463 ~~i~~l~ 469 (597)
T 3oja_B 463 AEVQQLT 469 (597)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 111
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=53.76 E-value=45 Score=27.29 Aligned_cols=33 Identities=15% Similarity=0.220 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 79 DDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQ 111 (267)
Q Consensus 79 dEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~ 111 (267)
|+--..-..+..+.|+++.++|.-++.-|.|+.
T Consensus 151 D~~k~~e~~iQkltd~~i~~id~~~~~KEkEim 183 (185)
T 1wqg_A 151 DEVGRAEKDLDKTTHQYVTQIDELVKHKEGELL 183 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555566677888889999999999998888875
No 112
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=52.17 E-value=51 Score=24.06 Aligned_cols=78 Identities=14% Similarity=0.279 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 31 DSRAQDVMKTIDRVAEDYLDNMKHYSKDKKKETLAEIQKYFDKTKEYGDD----KVQLAIQTYEMVDKYIRKLDTDLARF 106 (267)
Q Consensus 31 D~~~~~~~~~i~~~~~~~~k~~~~~~~~~~~~~~~~I~~~~~~~~~lsdE----Kv~LA~~a~dlVd~hirrLD~dl~~~ 106 (267)
+..+..+..+|...+... ..++.++|...+.+|...+++|.++-+. .-.|-...--.+...+|.--.+|.+|
T Consensus 11 E~df~~l~~~i~~kl~~i----~~~~geerk~~i~~ie~~l~EA~ell~qMelE~r~~p~~~R~~~~~klr~Yk~dL~~l 86 (102)
T 1vcs_A 11 EQDFAVLTAEITSKIARV----PRLPPDEKKQMVANVEKQLEEARELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKL 86 (102)
T ss_dssp HHHHHHHHHHHHHHHHHG----GGSCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh----hccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHhHHHHHHHHHHHHHHHHHH
Confidence 445556666666555542 2345567888888888888888776543 22222223344555667777777777
Q ss_pred HHHHHH
Q psy12696 107 EQEIQE 112 (267)
Q Consensus 107 e~el~~ 112 (267)
..++..
T Consensus 87 k~elk~ 92 (102)
T 1vcs_A 87 ETDFKR 92 (102)
T ss_dssp HHHTHH
T ss_pred HHHHHH
Confidence 776654
No 113
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=51.86 E-value=18 Score=25.31 Aligned_cols=43 Identities=23% Similarity=0.556 Sum_probs=26.3
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCc-------cCCCC----CCceeCcCCc
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS-------LTTKP----KGKWYCPKCT 261 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~-------l~~~p----~~~w~C~~C~ 261 (267)
...| .|+++-++..|.-.+ ..||..|.. |.... .+..||..|-
T Consensus 25 ~~~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y 79 (89)
T 1x64_A 25 MPLCDKCGSGIVGAVVKARD-----KYRHPECFVCADCNLNLKQKGYFFVEGELYCETHA 79 (89)
T ss_dssp CCBCTTTCCBCCSCCEESSS-----CEECTTTCCCSSSCCCTTTSCCEEETTEEECHHHH
T ss_pred CCCcccCCCEecccEEEECC-----ceECccCCEecCCCCCCCCCCeEeECCEEECHHHH
Confidence 4568 898887766555444 236877754 22211 4678887764
No 114
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=51.82 E-value=44 Score=27.33 Aligned_cols=33 Identities=24% Similarity=0.345 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 79 DDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQ 111 (267)
Q Consensus 79 dEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~ 111 (267)
|+--..-..+..+.|+++.++|.-++.-|.|+.
T Consensus 151 D~~k~~e~~iQkltd~~i~~id~~~~~KEkEim 183 (185)
T 1is1_A 151 DEDRKAQEEIQKLTDVAVKKIDEVLAAKEKELM 183 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555556677888889999999999988888774
No 115
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=51.47 E-value=14 Score=23.53 Aligned_cols=41 Identities=20% Similarity=0.468 Sum_probs=25.4
Q ss_pred CCCcee-ecCCCCCC-CcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 212 NEPTYC-VCQQVSYG-EMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~-~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
.+...| +|...... .++.|.. -|+..|+.- ....||.|+..
T Consensus 4 ~~~~~C~IC~~~~~~p~~l~CgH------~fC~~Ci~~-----~~~~CP~Cr~~ 46 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLLPCLH------TLCSGCLEA-----SGMQCPICQAP 46 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCSTTSC------CSBTTTCSS-----SSSSCSSCCSS
T ss_pred ccCCCceEeCCccCCeEEcCCCC------cccHHHHcc-----CCCCCCcCCcE
Confidence 445667 88776433 3444432 388888754 34579999765
No 116
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=51.36 E-value=4.6 Score=23.61 Aligned_cols=11 Identities=27% Similarity=1.147 Sum_probs=9.1
Q ss_pred CCceeCcCCcC
Q psy12696 252 KGKWYCPKCTS 262 (267)
Q Consensus 252 ~~~w~C~~C~~ 262 (267)
.|+|.|+.|..
T Consensus 4 ~gDW~C~~C~~ 14 (33)
T 2k1p_A 4 ANDWQCKTCSN 14 (33)
T ss_dssp SSSCBCSSSCC
T ss_pred CCCcccCCCCC
Confidence 68899999954
No 117
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=51.01 E-value=4.3 Score=29.63 Aligned_cols=44 Identities=25% Similarity=0.501 Sum_probs=25.6
Q ss_pred cee-ecCCCCCCCcccccCCCCCCcceecccCccC-CCCCCceeCcCCcCc
Q psy12696 215 TYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLT-TKPKGKWYCPKCTSD 263 (267)
Q Consensus 215 ~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~-~~p~~~w~C~~C~~~ 263 (267)
..| +|.......++. .|. ..||..|+.-. ....+...||.|+..
T Consensus 22 ~~C~IC~~~~~~p~~~--~Cg---H~fC~~Ci~~~~~~~~~~~~CP~Cr~~ 67 (112)
T 1jm7_A 22 LECPICLELIKEPVST--KCD---HIFCKFCMLKLLNQKKGPSQCPLCKND 67 (112)
T ss_dssp TSCSSSCCCCSSCCBC--TTS---CCCCSHHHHHHHHSSSSSCCCTTTSCC
T ss_pred CCCcccChhhcCeEEC--CCC---CHHHHHHHHHHHHhCCCCCCCcCCCCc
Confidence 457 887654332221 333 46899998621 122345789999764
No 118
>2yf2_A C4B binding protein; immune system, complement system; 2.24A {Gallus gallus}
Probab=50.93 E-value=49 Score=21.58 Aligned_cols=37 Identities=16% Similarity=0.339 Sum_probs=32.3
Q ss_pred cchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12696 15 SLPIELQRNFTLMRELDSRAQDVMKTIDRVAEDYLDN 51 (267)
Q Consensus 15 ~LP~El~r~l~~irelD~~~~~~~~~i~~~~~~~~k~ 51 (267)
+||.+=.|.|-+||.|=.++|.+..++.-.-++|+..
T Consensus 24 ~~P~~~~rTLLEi~KL~LEIQKL~~EL~glskefleh 60 (65)
T 2yf2_A 24 HVPTEDVKTLLEIRKLFLEIQKLKVELQGLSKEFLEH 60 (65)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcchhHHHHHH
Confidence 7999999999999999999999999988888888753
No 119
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=49.79 E-value=1.1e+02 Score=25.17 Aligned_cols=37 Identities=19% Similarity=0.183 Sum_probs=18.6
Q ss_pred HHHHHHhhcchHHHHHhHHHHHHHHHHHHHHHHHHHH
Q psy12696 7 EQYLDSLDSLPIELQRNFTLMRELDSRAQDVMKTIDR 43 (267)
Q Consensus 7 edfld~ie~LP~El~r~l~~irelD~~~~~~~~~i~~ 43 (267)
++|.+.+..|-.||...-..=|+|......-+...+.
T Consensus 20 ~~~~q~~~~le~El~EFqesSrELE~ELE~eL~~~Ek 56 (189)
T 2v71_A 20 MKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQ 56 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555555555555444444443333
No 120
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=49.61 E-value=18 Score=23.73 Aligned_cols=29 Identities=10% Similarity=0.347 Sum_probs=15.3
Q ss_pred HHHHHHHhhcchHHHHHhHHHHHHHHHHHHHH
Q psy12696 6 LEQYLDSLDSLPIELQRNFTLMRELDSRAQDV 37 (267)
Q Consensus 6 Ledfld~ie~LP~El~r~l~~irelD~~~~~~ 37 (267)
+++||+.|. .++.....++.+|..++..+
T Consensus 25 VD~FLd~v~---~~~~~l~~e~~~L~~~~~~l 53 (57)
T 2wuj_A 25 VNEFLAQVR---KDYEIVLRKKTELEAKVNEL 53 (57)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 566666655 45555555555555554443
No 121
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=49.01 E-value=1.6e+02 Score=26.84 Aligned_cols=34 Identities=18% Similarity=0.188 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 78 GDDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQ 111 (267)
Q Consensus 78 sdEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~ 111 (267)
.+.|+.-++.-.+-++..|..|++.|+..+++++
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (471)
T 3mq9_A 434 LDAEKAQGQKKVEELEGEITTLNHKLQDASAEVE 467 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444443344455555555555555555544
No 122
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.60 E-value=11 Score=26.46 Aligned_cols=33 Identities=27% Similarity=0.759 Sum_probs=25.2
Q ss_pred CCCcee-ecCCCCCC---CcccccCCCCCCcceecccCcc
Q psy12696 212 NEPTYC-VCQQVSYG---EMIGCDNPDCPIEWFHFACVSL 247 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~---~mi~Cd~~~c~~~wfH~~Cv~l 247 (267)
..+++| +|+..-+| +-+.|..|. + -+|-.|+..
T Consensus 26 ~~pt~C~~C~~~lwGl~kqg~~C~~C~--~-~~Hk~C~~~ 62 (83)
T 2yuu_A 26 GQPTFCSVCKDFVWGLNKQGYKCRQCN--A-AIHKKCIDK 62 (83)
T ss_dssp SSCCCCSSSCCCCCSSSCCEEEETTTC--C-EECTTGGGT
T ss_pred CCCcChhhcChhhccccccccccCCcC--C-eeChhhhhh
Confidence 347899 99888765 567899955 4 499999874
No 123
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=47.23 E-value=22 Score=27.09 Aligned_cols=34 Identities=29% Similarity=0.295 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 79 DDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQE 112 (267)
Q Consensus 79 dEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~~ 112 (267)
|+--.+-.++..+.|++|.++|.-++.-+.||..
T Consensus 79 De~kr~e~eIQKLTDkyIkkID~ll~~KEKEI~~ 112 (121)
T 3lf9_A 79 FDISQALWEIQKLTDVAVKKIDEVLAAKEKELME 112 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556677788899999999999999999888865
No 124
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=47.18 E-value=10 Score=26.38 Aligned_cols=33 Identities=27% Similarity=0.752 Sum_probs=25.2
Q ss_pred CCCcee-ecCCCCCC---CcccccCCCCCCcceecccCcc
Q psy12696 212 NEPTYC-VCQQVSYG---EMIGCDNPDCPIEWFHFACVSL 247 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~---~mi~Cd~~~c~~~wfH~~Cv~l 247 (267)
..++|| +|.+.-+| +-+.|..|. + -+|-.|+..
T Consensus 32 ~~pt~C~~C~~~lwGl~kqG~~C~~C~--~-~~Hk~C~~~ 68 (77)
T 2enn_A 32 PQPTFCSVCHEFVWGLNKQGYQCRQCN--A-AIHKKCIDK 68 (77)
T ss_dssp SSCEECSSSCCEECCTTCCEEECSSSC--C-EEESGGGSS
T ss_pred CCCcCccccChhhccccccccCcCCCC--C-cCCHhHHhh
Confidence 458899 99887665 567899955 4 499999874
No 125
>2hzl_A Trap-T family sorbitol/mannitol transporter, periplasmic binding protein, SMOM; trap transporter, periplasmic subunit, ligand binding; 1.40A {Rhodobacter sphaeroides 2} PDB: 2hzk_A
Probab=47.03 E-value=1.2e+02 Score=26.52 Aligned_cols=85 Identities=7% Similarity=0.084 Sum_probs=43.4
Q ss_pred HHhhcchHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcC----CCChhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy12696 11 DSLDSLPIELQRNFTL-MRELDSRAQDVMKTIDRVAEDYLDNMK----HYSKDKKKETLAEIQKYFDKTKEYGDDKVQLA 85 (267)
Q Consensus 11 d~ie~LP~El~r~l~~-irelD~~~~~~~~~i~~~~~~~~k~~~----~~~~~~~~~~~~~I~~~~~~~~~lsdEKv~LA 85 (267)
+..+.||.|+|..|.. ..+.-....+...+.+....+.++..+ .++++++.......+..+++.. ++-...
T Consensus 252 ~~~~~L~~~~q~~l~~a~~~a~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~v~~~~~----~~~~~~ 327 (365)
T 2hzl_A 252 SAYEGLTPTYQSLLRTACHAADANMLQLYDWKNPTAIKSLVAQGTQLRPFSPEILQACFEAANEVYAEME----ASNPAF 327 (365)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHH----HHCHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHHHHHHHH----ccCHHH
Confidence 3456899999988877 466555555554444444334444443 2344434333333333333221 122345
Q ss_pred HHHHHHHHHHHHHH
Q psy12696 86 IQTYEMVDKYIRKL 99 (267)
Q Consensus 86 ~~a~dlVd~hirrL 99 (267)
..+++.+..+++.+
T Consensus 328 ~~~~~~~~~~~~~~ 341 (365)
T 2hzl_A 328 KKIWDSIKAFRSEH 341 (365)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 56666666665544
No 126
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=46.84 E-value=6.2 Score=27.01 Aligned_cols=19 Identities=26% Similarity=0.712 Sum_probs=11.1
Q ss_pred CCceeecCCCCCCCcccccCCC
Q psy12696 213 EPTYCVCQQVSYGEMIGCDNPD 234 (267)
Q Consensus 213 ~~~~C~C~~~~~~~mi~Cd~~~ 234 (267)
.+..|+|..... +.|-.|+
T Consensus 8 ~pWC~ICneDAt---lrC~gCd 26 (67)
T 2d8v_A 8 LPWCCICNEDAT---LRCAGCD 26 (67)
T ss_dssp CSSCTTTCSCCC---EEETTTT
T ss_pred CCeeEEeCCCCe---EEecCCC
Confidence 345558877632 5666654
No 127
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=46.20 E-value=71 Score=22.07 Aligned_cols=41 Identities=5% Similarity=0.067 Sum_probs=25.8
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 71 FDKTKEYGDDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQ 111 (267)
Q Consensus 71 ~~~~~~lsdEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~ 111 (267)
|+.+++..+|.+..=....+.+++-|...|..+..|..++.
T Consensus 24 Lq~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLD 64 (72)
T 3nmd_A 24 LQYALQEKIEELRQRDALIDELELELDQKDELIQMLQNELD 64 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555565566666677777777777777766654
No 128
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=45.71 E-value=15 Score=24.41 Aligned_cols=33 Identities=27% Similarity=0.738 Sum_probs=25.2
Q ss_pred CCCcee-ecCCCCCC---CcccccCCCCCCcceecccCcc
Q psy12696 212 NEPTYC-VCQQVSYG---EMIGCDNPDCPIEWFHFACVSL 247 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~---~mi~Cd~~~c~~~wfH~~Cv~l 247 (267)
..+++| +|+..-+| +-+.|..|. + -+|-.|+..
T Consensus 21 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~--~-~~Hk~C~~~ 57 (65)
T 2enz_A 21 KSPTFCEHCGTLLWGLARQGLKCDACG--M-NVHHRCQTK 57 (65)
T ss_dssp CSCCBCSSSCCBCCCSSSCSEEESSSC--C-EECTTTTTT
T ss_pred CCCcCchhcChhheecCCcccccCCCC--C-ccCHhHHhh
Confidence 357899 99988765 567899854 5 499999874
No 129
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=45.61 E-value=1.4e+02 Score=25.21 Aligned_cols=111 Identities=13% Similarity=0.096 Sum_probs=0.0
Q ss_pred ChhhHHHHHHHHhhcchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH--HHHHHHHHHHHHHHHhH
Q psy12696 1 MSTSYLEQYLDSLDSLPIELQRNFTLMRELDSRAQDVMKTIDRVAEDYLDNMKHYSKDKKK--ETLAEIQKYFDKTKEYG 78 (267)
Q Consensus 1 m~~~yLedfld~ie~LP~El~r~l~~irelD~~~~~~~~~i~~~~~~~~k~~~~~~~~~~~--~~~~~I~~~~~~~~~ls 78 (267)
||--+|...++ |..|-.+|.+.-..+++|-..+.++..++......+......+....+. ..-..|...-.++..+.
T Consensus 2 ~m~~~L~~L~~-LQ~lD~~i~~l~~~~~~lp~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~ 80 (256)
T 3na7_A 2 GSNTHLKQLIE-ISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQ 80 (256)
T ss_dssp CCHHHHHHHHH-HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHH-HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 79 DDKVQLAI-QTYEMVDKYIRKLDTDLARFEQEIQE 112 (267)
Q Consensus 79 dEKv~LA~-~a~dlVd~hirrLD~dl~~~e~el~~ 112 (267)
..=..+.+ .-|+.+.+-|.-+...+..++.++..
T Consensus 81 ~~l~~v~~~kE~~aL~kEie~~~~~i~~lE~eile 115 (256)
T 3na7_A 81 KKMSEIKSERELRSLNIEEDIAKERSNQANREIEN 115 (256)
T ss_dssp HHHHHCSSSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 130
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.77 E-value=17 Score=25.64 Aligned_cols=33 Identities=36% Similarity=0.804 Sum_probs=25.4
Q ss_pred CCCcee-ecCCCCCC---CcccccCCCCCCcceecccCcc
Q psy12696 212 NEPTYC-VCQQVSYG---EMIGCDNPDCPIEWFHFACVSL 247 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~---~mi~Cd~~~c~~~wfH~~Cv~l 247 (267)
..+++| +|+..-+| +-+.|..|. + -+|-.|+..
T Consensus 26 ~~pt~C~~C~~~l~Gl~kqG~~C~~C~--~-~~Hk~C~~~ 62 (85)
T 2eli_A 26 GSPTFCDHCGSLLYGLIHQGMKCDTCD--M-NVHKQCVIN 62 (85)
T ss_dssp SSCCBCSSSCCBCCCSSSCEEECSSSC--C-EEETTTTTT
T ss_pred CCCcCCcccCccccccccCCCcCCCcC--C-ccCHhHHhh
Confidence 357899 99988776 567899854 5 499999874
No 131
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.61 E-value=5.8 Score=26.33 Aligned_cols=43 Identities=16% Similarity=0.412 Sum_probs=25.4
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
+...| +|........+ .|. ..||..|+.-... ....||.|+..
T Consensus 14 ~~~~C~IC~~~~~~~~~---~Cg---H~fc~~Ci~~~~~--~~~~CP~Cr~~ 57 (70)
T 2ecn_A 14 DEEECCICMDGRADLIL---PCA---HSFCQKCIDKWSD--RHRNCPICRLQ 57 (70)
T ss_dssp CCCCCSSSCCSCCSEEE---TTT---EEECHHHHHHSSC--CCSSCHHHHHC
T ss_pred CCCCCeeCCcCccCccc---CCC---CcccHHHHHHHHH--CcCcCCCcCCc
Confidence 35567 88766434223 333 4599999862211 35679988643
No 132
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=43.02 E-value=8 Score=26.23 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=27.8
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
+...| +|.......++. .|. ..|+..|+.-.-. .+...||.|+..
T Consensus 7 ~~~~C~IC~~~~~~Pv~~--~Cg---H~fc~~Ci~~~~~-~~~~~CP~C~~~ 52 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVIV--STG---QTYERSSIQKWLD-AGHKTCPKSQET 52 (78)
T ss_dssp SSSSCTTTSCCCSSEEEE--TTT---EEEEHHHHHHHHT-TTCCBCTTTCCB
T ss_pred ccCCCCCccccccCCEEc--CCC---CeecHHHHHHHHH-HCcCCCCCCcCC
Confidence 45678 898775443332 343 4699999862111 246789999764
No 133
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.60 E-value=20 Score=24.68 Aligned_cols=22 Identities=36% Similarity=0.810 Sum_probs=16.0
Q ss_pred cceecccCc--cCCCCCCceeCcCCcCc
Q psy12696 238 EWFHFACVS--LTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 238 ~wfH~~Cv~--l~~~p~~~w~C~~C~~~ 263 (267)
.-||..|+. +... -.||.|+..
T Consensus 50 H~FH~~Ci~~Wl~~~----~~CP~CR~~ 73 (81)
T 2ecl_A 50 HSFHNCCMSLWVKQN----NRCPLCQQD 73 (81)
T ss_dssp CEEEHHHHHHHTTTC----CBCTTTCCB
T ss_pred CccChHHHHHHHHhC----CCCCCcCCC
Confidence 359999997 3332 279999865
No 134
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=42.45 E-value=6.2 Score=27.77 Aligned_cols=47 Identities=15% Similarity=0.468 Sum_probs=27.4
Q ss_pred CCCcee-ecCCCCCCC-cccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 212 NEPTYC-VCQQVSYGE-MIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~~-mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
.+...| +|....... ++. .|. .-|+..|+.-.....+...||.|+..
T Consensus 11 ~~~~~C~IC~~~~~~p~~~~--~Cg---H~fC~~Ci~~~~~~~~~~~CP~Cr~~ 59 (92)
T 3ztg_A 11 PDELLCLICKDIMTDAVVIP--CCG---NSYCDECIRTALLESDEHTCPTCHQN 59 (92)
T ss_dssp CTTTEETTTTEECSSCEECT--TTC---CEECHHHHHHHHHHCTTCCCTTTCCS
T ss_pred CcCCCCCCCChhhcCceECC--CCC---CHHHHHHHHHHHHhcCCCcCcCCCCc
Confidence 345678 898764433 332 233 35888888522112234789999865
No 135
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=42.34 E-value=12 Score=23.50 Aligned_cols=31 Identities=23% Similarity=0.583 Sum_probs=23.8
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccCcc
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSL 247 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l 247 (267)
.+.+| +|++.-+ +-+.|..|. + -+|-.|+..
T Consensus 13 ~pt~C~~C~~~l~-qG~~C~~C~--~-~~H~~C~~~ 44 (52)
T 1faq_A 13 KLAFCDICQKFLL-NGFRCQTCG--Y-KFHEHCSTK 44 (52)
T ss_dssp SCEECTTSSSEEC-SEEECTTTT--C-CBCSTTSSS
T ss_pred CCcCCCCcccccc-cCCEeCCCC--C-eEChhHHhh
Confidence 47899 8987755 677899855 4 499999874
No 136
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=42.01 E-value=36 Score=23.28 Aligned_cols=44 Identities=25% Similarity=0.511 Sum_probs=25.6
Q ss_pred CCcee-ecCCCCC-CCcccccCCCCCCcceecccCc-------cCC---CCCCceeCcCCc
Q psy12696 213 EPTYC-VCQQVSY-GEMIGCDNPDCPIEWFHFACVS-------LTT---KPKGKWYCPKCT 261 (267)
Q Consensus 213 ~~~~C-~C~~~~~-~~mi~Cd~~~c~~~wfH~~Cv~-------l~~---~p~~~w~C~~C~ 261 (267)
....| .|+++-+ +++|.-.+ .-||..|.. |.. ...+..||..|-
T Consensus 14 ~~~~C~~C~~~I~~~~~v~a~~-----~~wH~~CF~C~~C~~~L~~~~~~~~g~~yC~~~y 69 (80)
T 2dj7_A 14 GPSHCAGCKEEIKHGQSLLALD-----KQWHVSCFKCQTCSVILTGEYISKDGVPYCESDY 69 (80)
T ss_dssp SCSCCTTTCCCCSSSCCEEETT-----EEECTTTCBCSSSCCBCSSCCEEETTEEECTTHH
T ss_pred CCCCCcCcCCeeCCCeEEEECC-----cccccccCCcCcCCCCcCCCeEEECCEEECHHHH
Confidence 34567 8888764 66665444 225776654 221 115678888774
No 137
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=41.87 E-value=18 Score=24.32 Aligned_cols=42 Identities=17% Similarity=0.541 Sum_probs=25.0
Q ss_pred ee-ecCCCCCCCcccccCCCCCCcceecccCc-------cC-CCC----CCceeCcCCcC
Q psy12696 216 YC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS-------LT-TKP----KGKWYCPKCTS 262 (267)
Q Consensus 216 ~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~-------l~-~~p----~~~w~C~~C~~ 262 (267)
.| .|+++-.+..|.-.+ ..||..|.. |. ... .+..||..|..
T Consensus 7 ~C~~C~~~I~~~~v~a~~-----~~wH~~CF~C~~C~~~L~~~~~f~~~~~~~yC~~C~~ 61 (73)
T 1wig_A 7 GCDSCEKYITGRVLEAGE-----KHYHPSCALCVRCGQMFAEGEEMYLQGSSIWHPACRQ 61 (73)
T ss_dssp SCSSSCCCCSSCCBCCSS-----CCBCTTTSCCSSSCCCCCSSCCCEEETTEEECTTHHH
T ss_pred CcccCCCEecCeeEEeCC-----CCCCCCcCEeCCCCCCCCCCCeeEeeCCEEEChHHCh
Confidence 46 787776666555443 235776654 22 111 46789999953
No 138
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=41.78 E-value=11 Score=23.44 Aligned_cols=32 Identities=25% Similarity=0.744 Sum_probs=24.3
Q ss_pred CCcee-ecCCCCCC---CcccccCCCCCCcceecccCcc
Q psy12696 213 EPTYC-VCQQVSYG---EMIGCDNPDCPIEWFHFACVSL 247 (267)
Q Consensus 213 ~~~~C-~C~~~~~~---~mi~Cd~~~c~~~wfH~~Cv~l 247 (267)
.+++| +|+..-+| +-+.|..|. + -.|-.|+..
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~C~--~-~~H~~C~~~ 45 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCEDCG--M-NVHHKCREK 45 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTC--C-EECHHHHTT
T ss_pred CCCCcCCCCceeeccCCccCEeCCCC--C-eECHHHhhh
Confidence 47789 99887765 567899855 4 499999864
No 139
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=38.85 E-value=13 Score=27.37 Aligned_cols=44 Identities=18% Similarity=0.415 Sum_probs=26.5
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
...| +|........+. .|. .-|+..|+.-... .+...||.|+..
T Consensus 15 ~~~C~iC~~~~~~p~~~--~Cg---H~fC~~Ci~~~~~-~~~~~CP~Cr~~ 59 (115)
T 3l11_A 15 ECQCGICMEILVEPVTL--PCN---HTLCKPCFQSTVE-KASLCCPFCRRR 59 (115)
T ss_dssp HHBCTTTCSBCSSCEEC--TTS---CEECHHHHCCCCC-TTTSBCTTTCCB
T ss_pred CCCCccCCcccCceeEc--CCC---CHHhHHHHHHHHh-HCcCCCCCCCcc
Confidence 4568 888765443222 333 3588999862221 345789999864
No 140
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=38.85 E-value=8.4 Score=30.39 Aligned_cols=46 Identities=17% Similarity=0.463 Sum_probs=28.1
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
+...| +|...... .+.+-.|. ..||..|+.-... .+...||.|+..
T Consensus 53 ~~~~C~IC~~~~~~-p~~~~~Cg---H~fC~~Ci~~~~~-~~~~~CP~Cr~~ 99 (165)
T 2ckl_B 53 SELMCPICLDMLKN-TMTTKECL---HRFCADCIITALR-SGNKECPTCRKK 99 (165)
T ss_dssp HHHBCTTTSSBCSS-EEEETTTC---CEEEHHHHHHHHH-TTCCBCTTTCCB
T ss_pred CCCCCcccChHhhC-cCEeCCCC---ChhHHHHHHHHHH-hCcCCCCCCCCc
Confidence 34568 88766443 33333444 5799999862111 235679999864
No 141
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=37.71 E-value=2.4e+02 Score=25.86 Aligned_cols=37 Identities=16% Similarity=0.263 Sum_probs=22.9
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 72 DKTKEYGDDKVQLAIQTYEMVDKYIRKLDTDLARFEQ 108 (267)
Q Consensus 72 ~~~~~lsdEKv~LA~~a~dlVd~hirrLD~dl~~~e~ 108 (267)
+..+.-.+.-|..-+.+++..+..|..|...+..++.
T Consensus 97 ~~~~~~~~~~i~~l~~~~~~~~~~i~~L~~~v~~l~~ 133 (411)
T 3ghg_C 97 EASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEA 133 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455566666666666677777777666665554
No 142
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.64 E-value=71 Score=21.73 Aligned_cols=45 Identities=24% Similarity=0.602 Sum_probs=27.6
Q ss_pred Ccee-ecCCCCC-CCcccccCCCCCCcceecccCc-------cCCC------CCCceeCcCCcCc
Q psy12696 214 PTYC-VCQQVSY-GEMIGCDNPDCPIEWFHFACVS-------LTTK------PKGKWYCPKCTSD 263 (267)
Q Consensus 214 ~~~C-~C~~~~~-~~mi~Cd~~~c~~~wfH~~Cv~-------l~~~------p~~~w~C~~C~~~ 263 (267)
...| .|+++-+ +++|.-.+ .-||..|.. |... ..+..||..|-..
T Consensus 15 ~~~C~~C~~~I~~~e~v~a~~-----~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~ 74 (82)
T 2co8_A 15 GDLCALCGEHLYVLERLCVNG-----HFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQ 74 (82)
T ss_dssp SCBCSSSCCBCCTTTBCCBTT-----BCCBTTTCBCSSSCCBCCTTSEECCTTTCCCEETTTCCC
T ss_pred CCCCcccCCCcccceEEEECC-----CeeCCCcCEEcCCCCCcCCCceeEeCcCCEEEChHHHHh
Confidence 4467 8988764 56665444 236877754 2221 2577899888654
No 143
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=37.24 E-value=12 Score=27.74 Aligned_cols=22 Identities=41% Similarity=0.834 Sum_probs=15.8
Q ss_pred cceecccCc--cCCCCCCceeCcCCcCc
Q psy12696 238 EWFHFACVS--LTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 238 ~wfH~~Cv~--l~~~p~~~w~C~~C~~~ 263 (267)
.-||..|+. |.. .-.||.|+..
T Consensus 75 H~FH~~Ci~~Wl~~----~~~CP~Cr~~ 98 (106)
T 3dpl_R 75 HAFHFHCISRWLKT----RQVCPLDNRE 98 (106)
T ss_dssp CEEEHHHHHHHHTT----CSBCSSSCSB
T ss_pred cEECHHHHHHHHHc----CCcCcCCCCc
Confidence 359999987 322 3469999875
No 144
>4dac_A Computationally designed crystal forming protein; alpha-helix, three-helix bundle, coiled-coil protein, DE NOV computational protein design; 2.10A {Synthetic}
Probab=36.90 E-value=43 Score=18.19 Aligned_cols=19 Identities=21% Similarity=0.606 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy12696 91 MVDKYIRKLDTDLARFEQE 109 (267)
Q Consensus 91 lVd~hirrLD~dl~~~e~e 109 (267)
.+|..++||+.+..+++.+
T Consensus 5 kldanvkrlekevgklege 23 (28)
T 4dac_A 5 KLDANVKRLEKEVGKLEGE 23 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred eccccHHHHHHHHhhhhhh
Confidence 4567777777777777644
No 145
>2zzv_A ABC transporter, solute-binding protein; periplasmic substrate binding protein, calcium, lactate, trap transporter, transport protein; 1.40A {Thermus thermophilus} PDB: 2zzw_A 2zzx_A
Probab=36.88 E-value=2.1e+02 Score=24.94 Aligned_cols=43 Identities=19% Similarity=0.115 Sum_probs=24.0
Q ss_pred HHhhcchHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy12696 11 DSLDSLPIELQRNFTL-MRELDSRAQDVMKTIDRVAEDYLDNMK 53 (267)
Q Consensus 11 d~ie~LP~El~r~l~~-irelD~~~~~~~~~i~~~~~~~~k~~~ 53 (267)
+..+.||.|+|..|.. ..+.-....+...+.+....+.++..+
T Consensus 259 ~~~~~L~~~~q~~i~~a~~~a~~~~~~~~~~~~~~~~~~l~~~G 302 (361)
T 2zzv_A 259 NRWRSLPKPLQERFIAAVHEYSWIHYAGIQKANLEAWPKYRQAG 302 (361)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHCC
Confidence 3456899999988777 455544444444444433333333333
No 146
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=36.41 E-value=8.9 Score=27.67 Aligned_cols=43 Identities=23% Similarity=0.608 Sum_probs=27.2
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCc--cCCCCCCceeCcCCcCc
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS--LTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~~w~C~~C~~~ 263 (267)
...| +|.... ...+.|-.|. ..||..|+. +... ...||.|+..
T Consensus 22 ~~~C~IC~~~~-~~p~~~~~Cg---H~FC~~Ci~~~~~~~---~~~CP~Cr~~ 67 (100)
T 3lrq_A 22 VFRCFICMEKL-RDARLCPHCS---KLCCFSCIRRWLTEQ---RAQCPHCRAP 67 (100)
T ss_dssp HTBCTTTCSBC-SSEEECTTTC---CEEEHHHHHHHHHHT---CSBCTTTCCB
T ss_pred CCCCccCCccc-cCccccCCCC---ChhhHHHHHHHHHHC---cCCCCCCCCc
Confidence 4567 887664 3344555555 469999986 2221 1689999865
No 147
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=36.04 E-value=1.2e+02 Score=22.66 Aligned_cols=104 Identities=11% Similarity=0.168 Sum_probs=63.6
Q ss_pred HHHHHHHhhcchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----------------CChhHHHHHHH----
Q psy12696 6 LEQYLDSLDSLPIELQRNFTLMRELDSRAQDVMKTIDRVAEDYLDNMKH----------------YSKDKKKETLA---- 65 (267)
Q Consensus 6 Ledfld~ie~LP~El~r~l~~irelD~~~~~~~~~i~~~~~~~~k~~~~----------------~~~~~~~~~~~---- 65 (267)
++++.+-+..|-.++......+..|.....++..-++..- . +..... +....+ .+-
T Consensus 3 ~~~l~~~~q~l~~~~~~l~~~~~~l~~~i~e~~~~~e~l~-~-l~~~~~~~~lvplg~~~yv~a~i~~~~~--V~v~lG~ 78 (133)
T 1fxk_C 3 LAEIVAQLNIYQSQVELIQQQMEAVRATISELEILEKTLS-D-IQGKDGSETLVPVGAGSFIKAELKDTSE--VIMSVGA 78 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HTTCTTCEEEEEEETTEEEEEECCSTTE--EEEEEET
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-cccCCCCeEEEEcCCCcEEEEEECCCCE--EEEEcCC
Confidence 4555555666666666666666666666665555444321 1 221000 000000 000
Q ss_pred --HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 66 --EIQKYFDKTKEYGDDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQEK 113 (267)
Q Consensus 66 --~I~~~~~~~~~lsdEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~~~ 113 (267)
-+...+.+|.++-++|+..+....+.+.+.+..+...+..+...+...
T Consensus 79 g~~vE~~~~eA~~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~~l~~~ 128 (133)
T 1fxk_C 79 GVAIKKNFEDAMESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEEL 128 (133)
T ss_dssp TEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 134566778899999999999999999999999998888888777653
No 148
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=35.95 E-value=99 Score=22.20 Aligned_cols=80 Identities=9% Similarity=0.128 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhHH----HHHHH--HHHHHHHHHHHHHHHHHH
Q psy12696 29 ELDSRAQDVMKTIDRVAEDYLDNMKHYSKDKKKETLAEIQKYFDKTKEYGD----DKVQL--AIQTYEMVDKYIRKLDTD 102 (267)
Q Consensus 29 elD~~~~~~~~~i~~~~~~~~k~~~~~~~~~~~~~~~~I~~~~~~~~~lsd----EKv~L--A~~a~dlVd~hirrLD~d 102 (267)
..+..+..+..+|...+... ..++.++|...+.+|...+.+|.++-+ |.-.+ -...--.+...+|.--.+
T Consensus 5 ~YE~df~~~~~~i~~~l~~~----~~~~ge~Rk~~i~~ie~~ldEA~ell~qMelE~~~~~~p~~~R~~~~~klr~Yk~d 80 (97)
T 3onj_A 5 SYESDFKTTLEQAKASLAEA----PSQPLSQRNTTLKHVEQQQDELFDLLDQMDVEVNNSIGDASERATYKAKLREWKKT 80 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----hccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 34455555555555555433 245667888888888888877776554 44444 223344566667777777
Q ss_pred HHH-HHHHHHH
Q psy12696 103 LAR-FEQEIQE 112 (267)
Q Consensus 103 l~~-~e~el~~ 112 (267)
|.+ +..++..
T Consensus 81 l~~~lk~~lk~ 91 (97)
T 3onj_A 81 IQSDIKRPLQS 91 (97)
T ss_dssp HHHHTHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 777 7776654
No 149
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=35.40 E-value=12 Score=26.86 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=24.5
Q ss_pred cee-ecCCCCCCCcccccCCCCCCcceecccCccCC
Q psy12696 215 TYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTT 249 (267)
Q Consensus 215 ~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~ 249 (267)
..| .|+....+.+-.|..|+ -.+|..|+-++.
T Consensus 48 ~~C~~C~~~~~~~~Y~C~~C~---f~lH~~Ca~~p~ 80 (89)
T 1v5n_A 48 YTCDKCEEEGTIWSYHCDECD---FDLHAKCALNED 80 (89)
T ss_dssp CCCTTTSCCCCSCEEECTTTC---CCCCHHHHHCSS
T ss_pred eEeCCCCCcCCCcEEEcCCCC---CeEcHHhcCCCC
Confidence 468 88888777778899866 469999986543
No 150
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=35.35 E-value=10 Score=28.78 Aligned_cols=24 Identities=33% Similarity=0.606 Sum_probs=0.0
Q ss_pred cceecccCccCCCCCCceeCcCCcCc
Q psy12696 238 EWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 238 ~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
..||..|+.---. ..-.||.|+..
T Consensus 86 H~FH~~CI~~Wl~--~~~~CP~Cr~~ 109 (117)
T 4a0k_B 86 HAFHFHCISRWLK--TRQVCPLDNRE 109 (117)
T ss_dssp --------------------------
T ss_pred ceEcHHHHHHHHH--cCCcCCCCCCe
Confidence 3599999863111 12469999865
No 151
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana}
Probab=34.91 E-value=9.9 Score=28.16 Aligned_cols=32 Identities=19% Similarity=0.561 Sum_probs=21.1
Q ss_pred CCCcccccCCCCCCcceecccCccC--CCCCCceeCcC
Q psy12696 224 YGEMIGCDNPDCPIEWFHFACVSLT--TKPKGKWYCPK 259 (267)
Q Consensus 224 ~~~mi~Cd~~~c~~~wfH~~Cv~l~--~~p~~~w~C~~ 259 (267)
....|+||.|. .|=.+. .++. ....+.|||..
T Consensus 25 ~~~WVQCD~C~---KWRrLP-~~~~~~~~~pd~W~C~m 58 (100)
T 2l7p_A 25 ESAWVRCDDCF---KWRRIP-ASVVGSIDESSRWICMN 58 (100)
T ss_dssp SSEEEECTTTC---CEEEEC-HHHHTTSTTSSCCCGGG
T ss_pred CCeEEeeCCCC---ccccCC-hhHccccCCCCCceeCC
Confidence 35699999977 787664 2222 11258899965
No 152
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=34.89 E-value=75 Score=23.11 Aligned_cols=69 Identities=10% Similarity=0.140 Sum_probs=32.9
Q ss_pred HHHHHHHhhcchHHHHHhHHHHHHHHH-----HHH---HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHH
Q psy12696 6 LEQYLDSLDSLPIELQRNFTLMRELDS-----RAQ---DVMKTIDRVAEDYLDNMKHYSKDKKKETLAEIQKYFDKT 74 (267)
Q Consensus 6 Ledfld~ie~LP~El~r~l~~irelD~-----~~~---~~~~~i~~~~~~~~k~~~~~~~~~~~~~~~~I~~~~~~~ 74 (267)
|+.|-+.+..|=.+|.+.+..|..++. .+. ..+++.+..+.+.--....+++..|.....+|+..-..+
T Consensus 7 Fe~YE~df~~l~~~i~~kl~~i~~~~geerk~~i~~ie~~l~EA~ell~qMelE~r~~p~~~R~~~~~klr~Yk~dL 83 (102)
T 1vcs_A 7 GEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVREIPPQSRGMYSNRMRSYKQEM 83 (102)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHGGGSCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHhHHHHHHHHHHHHHHH
Confidence 344444444455566666666654411 122 122223334444333335566666776666665544444
No 153
>2lh0_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; NMR {Saccharomyces cerevisiae}
Probab=34.85 E-value=17 Score=25.04 Aligned_cols=30 Identities=20% Similarity=0.360 Sum_probs=22.5
Q ss_pred hhcchHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy12696 13 LDSLPIELQRNFTLMRELDSRAQDVMKTID 42 (267)
Q Consensus 13 ie~LP~El~r~l~~irelD~~~~~~~~~i~ 42 (267)
|++||.+|+..+.-|=+-|-....+..++-
T Consensus 9 L~~LP~~Lq~kV~aIV~~~PsSl~VF~~Ly 38 (70)
T 2lh0_A 9 LDELPESLSRKIGTVVRVLPSSLEIFEELY 38 (70)
T ss_dssp GGGSCHHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHhCccHHHHHHHHH
Confidence 789999999877777777777666555543
No 154
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=34.55 E-value=2.9e+02 Score=25.78 Aligned_cols=16 Identities=25% Similarity=0.505 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHH
Q psy12696 96 IRKLDTDLARFEQEIQ 111 (267)
Q Consensus 96 irrLD~dl~~~e~el~ 111 (267)
+..|...|.+|+..+.
T Consensus 177 ~~~l~~ki~~l~~~~~ 192 (464)
T 1m1j_B 177 IDSLHKKIQKLENAIA 192 (464)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444555544443
No 155
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=34.24 E-value=13 Score=28.41 Aligned_cols=40 Identities=28% Similarity=0.610 Sum_probs=23.6
Q ss_pred ee-ecCCCCCC-CcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 216 YC-VCQQVSYG-EMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 216 ~C-~C~~~~~~-~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
.| +|...... .++.| . ..||..|+.-.. .....||.|+..
T Consensus 55 ~C~iC~~~~~~~~~~~C---g---H~fc~~Ci~~~~--~~~~~CP~Cr~~ 96 (138)
T 4ayc_A 55 QCIICSEYFIEAVTLNC---A---HSFCSYCINEWM--KRKIECPICRKD 96 (138)
T ss_dssp BCTTTCSBCSSEEEETT---S---CEEEHHHHHHHT--TTCSBCTTTCCB
T ss_pred CCcccCcccCCceECCC---C---CCccHHHHHHHH--HcCCcCCCCCCc
Confidence 47 88766433 23333 3 369999986211 123469999765
No 156
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=34.08 E-value=24 Score=24.14 Aligned_cols=33 Identities=18% Similarity=0.621 Sum_probs=18.2
Q ss_pred CCcccccCCCCCCcceecccCccCC-CCCCceeCcC
Q psy12696 225 GEMIGCDNPDCPIEWFHFACVSLTT-KPKGKWYCPK 259 (267)
Q Consensus 225 ~~mi~Cd~~~c~~~wfH~~Cv~l~~-~p~~~w~C~~ 259 (267)
...|+||+..|. .|=.+.= ++.. .-.+.|||..
T Consensus 16 ~~WVQCd~p~C~-KWR~LP~-~~~~~~lpd~W~C~m 49 (69)
T 2e61_A 16 LVWVQCSFPNCG-KWRRLCG-NIDPSVLPDNWSCDQ 49 (69)
T ss_dssp CCEEECSSTTTC-CEEECCS-SCCTTTSCTTCCGGG
T ss_pred CeEEEeCccccC-cccCCcc-ccccccCCCcCEeCC
Confidence 568999933342 5755421 1211 1247899964
No 157
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.88 E-value=20 Score=24.39 Aligned_cols=43 Identities=19% Similarity=0.344 Sum_probs=26.0
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCcc-------CC----CCCCceeCcCCc
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSL-------TT----KPKGKWYCPKCT 261 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l-------~~----~p~~~w~C~~C~ 261 (267)
...| .|+++-++..|.-.+ .-||..|..- .. ...+..||..|-
T Consensus 15 ~~~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~cy 69 (79)
T 1x62_A 15 LPMCDKCGTGIVGVFVKLRD-----RHRHPECYVCTDCGTNLKQKGHFFVEDQIYCEKHA 69 (79)
T ss_dssp CCCCSSSCCCCCSSCEECSS-----CEECTTTTSCSSSCCCHHHHCCEESSSCEECHHHH
T ss_pred CCccccCCCCccCcEEEECc-----ceeCcCcCeeCCCCCCCCCCCeEeECCEEECHHHH
Confidence 4567 898887776655554 2368777541 11 115677887764
No 158
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.83 E-value=20 Score=23.84 Aligned_cols=46 Identities=17% Similarity=0.256 Sum_probs=25.7
Q ss_pred CCcee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCcc
Q psy12696 213 EPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSDR 264 (267)
Q Consensus 213 ~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~~ 264 (267)
+...| +|.......+ ....|. .-||..|+.-... ....||.|+..-
T Consensus 14 ~~~~C~IC~~~~~~p~-~~~~Cg---H~fC~~Ci~~~~~--~~~~CP~Cr~~~ 60 (72)
T 2djb_A 14 PYILCSICKGYLIDAT-TITECL---HTFCKSCIVRHFY--YSNRCPKCNIVV 60 (72)
T ss_dssp GGGSCTTTSSCCSSCE-ECSSSC---CEECHHHHHHHHH--HCSSCTTTCCCC
T ss_pred CCCCCCCCChHHHCcC-EECCCC---CHHHHHHHHHHHH--cCCcCCCcCccc
Confidence 45668 8876644332 222333 3499999852110 135699998653
No 159
>2yo3_A General control protein GCN4, putative inner MEMB protein, general control protein...; HANS motif, YADA-like head, ylhead; 2.00A {Saccharomyces cerevisiae}
Probab=33.37 E-value=1.7e+02 Score=25.28 Aligned_cols=48 Identities=13% Similarity=0.308 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 64 LAEIQKYFDKTKEYGDDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQ 111 (267)
Q Consensus 64 ~~~I~~~~~~~~~lsdEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~ 111 (267)
..++...+..+..+-|.|+.-.+.-.+-|++.++++|..++.+-..+.
T Consensus 200 v~QL~~s~~~an~yTd~k~~~l~n~I~~V~n~~~q~~~~~~~~~~~~~ 247 (268)
T 2yo3_A 200 YAQLKRSVEEANTYTDQKMGEMNSKIKGVENKMKQIEDKIEEILSKIY 247 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666778899999999999999999999999999988877766554
No 160
>2jwo_A RAG-2, V(D)J recombination-activating protein 2; phosphoinositide signaling, PHD domain, DNA recombination, DNA-binding, endonuclease, hydrolase; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 2v83_A* 2v85_A* 2v86_A* 2v87_A* 2v88_A* 2v89_A*
Probab=33.10 E-value=11 Score=26.44 Aligned_cols=31 Identities=35% Similarity=0.862 Sum_probs=22.7
Q ss_pred cccccCCCCCCcceecccCccCCC-------CCCceeCcC
Q psy12696 227 MIGCDNPDCPIEWFHFACVSLTTK-------PKGKWYCPK 259 (267)
Q Consensus 227 mi~Cd~~~c~~~wfH~~Cv~l~~~-------p~~~w~C~~ 259 (267)
||.|..-+ ..|.|..|..|... ...+|||.+
T Consensus 38 mi~cs~g~--ghwvhaqcm~l~e~~l~~lsq~n~ky~c~~ 75 (82)
T 2jwo_A 38 MIYCSHGD--GHWVHAQCMDLEERTLIHLSEGSNKYYCNE 75 (82)
T ss_dssp CEECCSSS--CCEECSGGGTCCHHHHHHHTTSSCCCCCST
T ss_pred hhhcCCCc--chHHHHHHhhHHHHHHHHHhcCCcEEEEcC
Confidence 89997653 48999999887552 245788864
No 161
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=32.82 E-value=1.5e+02 Score=24.86 Aligned_cols=93 Identities=14% Similarity=0.204 Sum_probs=50.6
Q ss_pred HHHHHHHHhhcchHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCChh-------HHHHHHHHHHHHHHHHHH
Q psy12696 5 YLEQYLDSLDSLPIELQRNFTLMRELD-SRAQDVMKTIDRVAEDYLDNMKHYSKD-------KKKETLAEIQKYFDKTKE 76 (267)
Q Consensus 5 yLedfld~ie~LP~El~r~l~~irelD-~~~~~~~~~i~~~~~~~~k~~~~~~~~-------~~~~~~~~I~~~~~~~~~ 76 (267)
.|+.|+..+..-|....+.|.-++-+= +.-.+.+..|....+ ....++. .-...|..|...+..++.
T Consensus 111 Ale~y~~ALq~~pP~~~~vl~aLk~yirae~KDR~Htl~hf~H-----v~~~dpe~A~~~k~~vl~hL~~Id~r~NqSL~ 185 (219)
T 3pmr_A 111 ALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQH-----VAAVDPEKAQQMRFQVHTHLQVIEERVNQSLG 185 (219)
T ss_dssp HHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHH-----HHccCHHHHhhcchHHHHHHHHHHHHHhhhHH
Confidence 578899999999888888777776532 212222222322211 1111221 122445667777777777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 77 YGDDKVQLAIQTYEMVDKYIRKLDTD 102 (267)
Q Consensus 77 lsdEKv~LA~~a~dlVd~hirrLD~d 102 (267)
+...==.|+..+.+.|+.-+.+-+.+
T Consensus 186 lL~~~P~l~~~i~~~i~~ll~~~~~~ 211 (219)
T 3pmr_A 186 LLDQNPHLAQELRPQIQELLHSEHLG 211 (219)
T ss_dssp HHTTSHHHHHHHHHHHHHHHC-----
T ss_pred HHHcCchHHHHHhHHHHHHHHhhccC
Confidence 77666667777766666554444433
No 162
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=32.76 E-value=2.2e+02 Score=26.34 Aligned_cols=22 Identities=18% Similarity=0.363 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy12696 92 VDKYIRKLDTDLARFEQEIQEK 113 (267)
Q Consensus 92 Vd~hirrLD~dl~~~e~el~~~ 113 (267)
|...|..|+..+..++.++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~ 102 (455)
T 2dq0_A 81 IVKRIGELENEVEELKKKIDYY 102 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3455778888888888777664
No 163
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=32.57 E-value=2.9e+02 Score=25.13 Aligned_cols=19 Identities=16% Similarity=-0.055 Sum_probs=7.3
Q ss_pred HHHHHHHHHhHHHHHHHHH
Q psy12696 68 QKYFDKTKEYGDDKVQLAI 86 (267)
Q Consensus 68 ~~~~~~~~~lsdEKv~LA~ 86 (267)
.+..++.+++-..|-.||.
T Consensus 466 ~~~~~~~~~~~~~~~~~~~ 484 (487)
T 3oja_A 466 ASANATLQELVVREQNLAS 484 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HhcccHHHHHHHHHHHHHH
Confidence 3333333333333434433
No 164
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=32.51 E-value=1.4e+02 Score=21.42 Aligned_cols=26 Identities=8% Similarity=0.057 Sum_probs=15.9
Q ss_pred HHHHHHHHhhcchHHHHHhHHHHHHH
Q psy12696 5 YLEQYLDSLDSLPIELQRNFTLMREL 30 (267)
Q Consensus 5 yLedfld~ie~LP~El~r~l~~irel 30 (267)
.|+.|-..+..|=.+|.+.+..|..+
T Consensus 2 lF~~YE~df~~~~~~i~~~l~~~~~~ 27 (97)
T 3onj_A 2 LLISYESDFKTTLEQAKASLAEAPSQ 27 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 35556666666666777766666544
No 165
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Probab=32.14 E-value=59 Score=29.45 Aligned_cols=34 Identities=15% Similarity=0.231 Sum_probs=24.5
Q ss_pred HHHHhhcchHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy12696 9 YLDSLDSLPIELQRNFTLMRELDSRAQDVMKTID 42 (267)
Q Consensus 9 fld~ie~LP~El~r~l~~irelD~~~~~~~~~i~ 42 (267)
|-+.++.||.++++.+..|++|..++..+..+..
T Consensus 40 ~~~~m~sLp~~v~~rI~aLk~lQ~E~~~le~ef~ 73 (359)
T 3fs3_A 40 YDDKMTDLTEEQKETLKKLKLYQKEYYDYESKFE 73 (359)
T ss_dssp -----CCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567899999999999999998888877766543
No 166
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=32.08 E-value=2.7e+02 Score=25.17 Aligned_cols=27 Identities=11% Similarity=0.370 Sum_probs=12.7
Q ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHHHH
Q psy12696 85 AIQTYEMVDKY-------IRKLDTDLARFEQEIQ 111 (267)
Q Consensus 85 A~~a~dlVd~h-------irrLD~dl~~~e~el~ 111 (267)
+..+.+.+++. |..|+.++..++.+|+
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (471)
T 3mq9_A 427 VMALMASLDAEKAQGQKKVEELEGEITTLNHKLQ 460 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555544 4444444444444443
No 167
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=32.02 E-value=14 Score=24.70 Aligned_cols=33 Identities=30% Similarity=0.753 Sum_probs=24.7
Q ss_pred CCCcee-ecCCCCCC---CcccccCCCCCCcceecccCcc
Q psy12696 212 NEPTYC-VCQQVSYG---EMIGCDNPDCPIEWFHFACVSL 247 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~---~mi~Cd~~~c~~~wfH~~Cv~l 247 (267)
..+++| .|+..-+| +-+.|..|. + -.|-.|+..
T Consensus 22 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~--~-~~Hk~C~~~ 58 (66)
T 1y8f_A 22 TTPTYCYECEGLLWGIARQGMRCTECG--V-KCHEKCQDL 58 (66)
T ss_dssp SSCCCCTTTCCCCCSSCCEEEEETTTC--C-EECTTHHHH
T ss_pred CCCcChhhcChhhcccCcceeEcCCCC--C-eeCHHHHhh
Confidence 347889 99888776 457899854 5 499999874
No 168
>3l39_A Putative PHOU-like phosphate regulatory protein; BT4638, structural genomics, joint center for structural genomics, JCSG; 1.93A {Bacteroides thetaiotaomicron}
Probab=31.78 E-value=1e+02 Score=25.41 Aligned_cols=43 Identities=12% Similarity=0.229 Sum_probs=31.2
Q ss_pred hhHHHHHHHHhhcchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 3 TSYLEQYLDSLDSLPIELQRNFTLMRELDSRAQDVMKTIDRVAED 47 (267)
Q Consensus 3 ~~yLedfld~ie~LP~El~r~l~~irelD~~~~~~~~~i~~~~~~ 47 (267)
+.+|.++++.. =+.++...+..|++++.+..++..+|...+.+
T Consensus 43 a~~L~~~l~~~--~~~~~~~~~~~I~~lE~~aD~i~~~i~~~L~~ 85 (227)
T 3l39_A 43 SVLLVESMEHD--LPTERADYYKQIKDMEREGDRLTHLIFDELST 85 (227)
T ss_dssp HHHHHHHTTCC--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555421 25788889999999999999999888765554
No 169
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=31.52 E-value=4.6e+02 Score=27.14 Aligned_cols=21 Identities=14% Similarity=0.169 Sum_probs=9.4
Q ss_pred HHHHHhHHHHHHHHHHHHHHH
Q psy12696 72 DKTKEYGDDKVQLAIQTYEMV 92 (267)
Q Consensus 72 ~~~~~lsdEKv~LA~~a~dlV 92 (267)
+++..|..|+-.|=+++-++-
T Consensus 1023 ~kv~~L~~e~~~L~qq~~~l~ 1043 (1080)
T 2dfs_A 1023 QLVSELKEQNTLLKTEKEELN 1043 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334444445544444444433
No 170
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=30.67 E-value=2.9e+02 Score=25.94 Aligned_cols=22 Identities=9% Similarity=0.185 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy12696 92 VDKYIRKLDTDLARFEQEIQEK 113 (267)
Q Consensus 92 Vd~hirrLD~dl~~~e~el~~~ 113 (267)
|...|..|+..+..++.++...
T Consensus 83 l~~~i~~le~~~~~~~~~~~~~ 104 (485)
T 3qne_A 83 LSNEKKEIIEKEAEADKNLRSK 104 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4556778888888888777654
No 171
>2vpn_A Periplasmic substrate binding protein; ectoine, hydroxyectoine, trap-transporter, periplasmic binding protein, transport; HET: 4CS; 1.55A {Halomonas elongata} PDB: 2vpo_A* 3gyy_A
Probab=30.57 E-value=2.4e+02 Score=24.09 Aligned_cols=39 Identities=13% Similarity=0.064 Sum_probs=22.3
Q ss_pred HHhhcchHHHHHhHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q psy12696 11 DSLDSLPIELQRNFTLM-RELDSRAQDVMKTIDRVAEDYL 49 (267)
Q Consensus 11 d~ie~LP~El~r~l~~i-relD~~~~~~~~~i~~~~~~~~ 49 (267)
+..+.||.++|..|... ++.-....+...+.+....+.+
T Consensus 218 ~~~~~L~~~~q~~l~~a~~~a~~~~~~~~~~~~~~~~~~l 257 (316)
T 2vpn_A 218 DFYEGLSEEDQQLVQDAADAAYDHTIEHIKGLSEESLEKI 257 (316)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999877764 4444444444444443333334
No 172
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=29.77 E-value=76 Score=19.52 Aligned_cols=11 Identities=9% Similarity=0.477 Sum_probs=4.2
Q ss_pred HHHHHHHHHHH
Q psy12696 96 IRKLDTDLARF 106 (267)
Q Consensus 96 irrLD~dl~~~ 106 (267)
|.|+|.++++.
T Consensus 11 I~kVdrEI~Kt 21 (42)
T 2l5g_B 11 MDRVDREITMV 21 (42)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 173
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.75 E-value=31 Score=22.62 Aligned_cols=42 Identities=26% Similarity=0.596 Sum_probs=24.6
Q ss_pred cee-ecCCCCCCCcccccCCCCCCcceecccCc-------cCCCC----CCceeCcCCc
Q psy12696 215 TYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS-------LTTKP----KGKWYCPKCT 261 (267)
Q Consensus 215 ~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~-------l~~~p----~~~w~C~~C~ 261 (267)
..| .|+++-.+.+|.-.+ .-||..|.. |.... .+..||..|-
T Consensus 6 ~~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~f~~~~g~~yC~~c~ 59 (70)
T 2d8x_A 6 SGCHQCGEFIIGRVIKAMN-----NSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCH 59 (70)
T ss_dssp SBCSSSCCBCCSCCEEETT-----EEECTTTSBCSSSCCBCSSSCCEEETTEEECHHHH
T ss_pred CcCccCCCEecceEEEECc-----ccccccCCEeCCCCCcCCCCccEeECCeEECHHHh
Confidence 356 788776666555444 235876654 22211 5677887774
No 174
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=29.61 E-value=1.6e+02 Score=21.36 Aligned_cols=26 Identities=8% Similarity=0.137 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 25 TLMRELDSRAQDVMKTIDRVAEDYLD 50 (267)
Q Consensus 25 ~~irelD~~~~~~~~~i~~~~~~~~k 50 (267)
.+|+++|.++..-....+..+..++.
T Consensus 6 ~~~~~~~~~i~~W~~~~~~~ir~lL~ 31 (106)
T 3ag7_A 6 EEIKNIDAKIRKWSSGKSGNIRSLLS 31 (106)
T ss_dssp HHHHHHHHHHHHHHTTTTTCHHHHHT
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 45677777777666554444444443
No 175
>3u65_B TP33 protein; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; HET: EDO; 1.40A {Treponema pallidum subsp} PDB: 4di4_B* 4di3_D*
Probab=29.20 E-value=2e+02 Score=25.06 Aligned_cols=62 Identities=15% Similarity=0.236 Sum_probs=32.8
Q ss_pred HHhhcchHHHHHhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC----CCChhHHHHHHHHHHHHHH
Q psy12696 11 DSLDSLPIELQRNFTLM-RELDSRAQDVMKTIDRVAEDYLDNMK----HYSKDKKKETLAEIQKYFD 72 (267)
Q Consensus 11 d~ie~LP~El~r~l~~i-relD~~~~~~~~~i~~~~~~~~k~~~----~~~~~~~~~~~~~I~~~~~ 72 (267)
+..+.||.|.|..|... ++.-....+...+.+....+.++..+ .++++++.+..+..+..+.
T Consensus 235 ~~w~~L~~e~q~~i~~a~~e~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~e~~~~~~~~~~~v~~ 301 (328)
T 3u65_B 235 GSWARIPSRYHDAMLQAATRVRQRLANNLETLDRECSNNIQKAGVSIVHLTPQEIQEWRTEFAADVK 301 (328)
T ss_dssp HHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHHHHH
Confidence 45688999999887764 23333333444444444444444443 4555555544444444333
No 176
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=29.07 E-value=26 Score=22.89 Aligned_cols=45 Identities=22% Similarity=0.488 Sum_probs=26.2
Q ss_pred CCcee-ecCCCCC-----CCcccccCCCCCCcceecccCc--cCCCCCCceeCcCCcCcc
Q psy12696 213 EPTYC-VCQQVSY-----GEMIGCDNPDCPIEWFHFACVS--LTTKPKGKWYCPKCTSDR 264 (267)
Q Consensus 213 ~~~~C-~C~~~~~-----~~mi~Cd~~~c~~~wfH~~Cv~--l~~~p~~~w~C~~C~~~~ 264 (267)
+...| +|..... +..+..-.|. ..||..|+. +... -.||.|+..-
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~Cg---H~fc~~Ci~~~~~~~----~~CP~Cr~~~ 61 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECG---HVFCSQCLRDSLKNA----NTCPTCRKKI 61 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTS---CEEEHHHHHHHHHHC----SBCTTTCCBC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCC---ChHhHHHHHHHHHcC----CCCCCCCCcc
Confidence 34567 8876521 2333333443 459999986 2211 3799998653
No 177
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=28.93 E-value=19 Score=23.45 Aligned_cols=44 Identities=16% Similarity=0.313 Sum_probs=23.6
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
...| +|....... +..-.|. ..||..|+.-.. .....||.|+..
T Consensus 5 ~~~C~IC~~~~~~~-~~~~~C~---H~fc~~Ci~~~~--~~~~~CP~Cr~~ 49 (68)
T 1chc_A 5 AERCPICLEDPSNY-SMALPCL---HAFCYVCITRWI--RQNPTCPLCKVP 49 (68)
T ss_dssp CCCCSSCCSCCCSC-EEETTTT---EEESTTHHHHHH--HHSCSTTTTCCC
T ss_pred CCCCeeCCccccCC-cEecCCC---CeeHHHHHHHHH--hCcCcCcCCChh
Confidence 3456 886663322 1222333 359999986211 112479999754
No 178
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.88 E-value=55 Score=21.81 Aligned_cols=43 Identities=28% Similarity=0.669 Sum_probs=25.3
Q ss_pred ee-ecCCCCCC----CcccccCCCCCCcceecccCc-------cCCCC----CCceeCcCCcCc
Q psy12696 216 YC-VCQQVSYG----EMIGCDNPDCPIEWFHFACVS-------LTTKP----KGKWYCPKCTSD 263 (267)
Q Consensus 216 ~C-~C~~~~~~----~mi~Cd~~~c~~~wfH~~Cv~-------l~~~p----~~~w~C~~C~~~ 263 (267)
.| .|+++-++ ..|.-.+- . ||..|.. |...+ .+..||..|-..
T Consensus 7 ~C~~C~~~I~~~g~~~~~~a~~~----~-wH~~CF~C~~C~~~L~~~~f~~~~g~~yC~~cy~~ 65 (76)
T 1x68_A 7 GCVACSKPISGLTGAKFICFQDS----Q-WHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSG 65 (76)
T ss_dssp CCTTTCCCCCTTTTCCEEEETTE----E-EEGGGCBCTTTCCBCSSSCEEEETTEEEETTTTCC
T ss_pred CCccCCCcccCCCCceeEEECCc----c-cCcccCChhhCCCcCCCCceEeECCEEECHHHhhh
Confidence 46 77777554 45544441 3 5876654 33222 577899988654
No 179
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=28.57 E-value=19 Score=23.89 Aligned_cols=32 Identities=25% Similarity=0.744 Sum_probs=24.0
Q ss_pred CCcee-ecCCCCCC---CcccccCCCCCCcceecccCcc
Q psy12696 213 EPTYC-VCQQVSYG---EMIGCDNPDCPIEWFHFACVSL 247 (267)
Q Consensus 213 ~~~~C-~C~~~~~~---~mi~Cd~~~c~~~wfH~~Cv~l 247 (267)
.+.+| .|++.-+| +-+.|..|. + -.|-.|...
T Consensus 19 ~pt~C~~C~~~l~Gl~~qg~~C~~C~--~-~~Hk~C~~~ 54 (65)
T 3uej_A 19 SPTFCDHCGSLLWGLVKQGLKCEDCG--M-NVHHKCREK 54 (65)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTC--C-EECHHHHTT
T ss_pred CCCcccccChhhhccCceeeECCCCC--C-eEchhHhhh
Confidence 47789 89887665 467899855 4 599999864
No 180
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=28.31 E-value=44 Score=20.95 Aligned_cols=13 Identities=31% Similarity=1.119 Sum_probs=10.0
Q ss_pred CCceeCcCCcCcc
Q psy12696 252 KGKWYCPKCTSDR 264 (267)
Q Consensus 252 ~~~w~C~~C~~~~ 264 (267)
.+.|.||.|....
T Consensus 28 P~dw~CP~Cg~~k 40 (46)
T 6rxn_A 28 PDDWCCPVCGVSK 40 (46)
T ss_dssp CTTCBCTTTCCBG
T ss_pred CCCCcCcCCCCcH
Confidence 5579999997653
No 181
>2ld6_A Chemotaxis protein CHEA; TMP1, transferase; NMR {Thermotoga maritima}
Probab=28.16 E-value=1.6e+02 Score=22.26 Aligned_cols=71 Identities=10% Similarity=0.137 Sum_probs=31.2
Q ss_pred ChhhHHHHHHHHhhcchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHH
Q psy12696 1 MSTSYLEQYLDSLDSLPIELQRNFTLMRELDSRAQDVMKTIDRVAEDYLDNMKHYSKDKKKETLAEIQKYFD 72 (267)
Q Consensus 1 m~~~yLedfld~ie~LP~El~r~l~~irelD~~~~~~~~~i~~~~~~~~k~~~~~~~~~~~~~~~~I~~~~~ 72 (267)
|+.-+++.|++....+=..|...|..+..= ..-.+....|.+..+.+-..++.+.-..-......+...+.
T Consensus 1 m~~ell~~Fl~Ea~e~L~~l~~~l~~le~~-~~d~~~~~~l~R~aHTLKGsA~~~G~~~l~~lah~lE~~l~ 71 (139)
T 2ld6_A 1 MMEEYLGVFVDETKEYLQNLNDTLLELEKN-PEDMELINEAFRALHTLKGMAGTMGFSSMAKLCHTLENILD 71 (139)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-SSSSSHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHHH
Confidence 566778888876654444444333222110 00123344455555554444444433322233334444443
No 182
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=28.07 E-value=5.2e+02 Score=26.71 Aligned_cols=21 Identities=10% Similarity=0.077 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy12696 80 DKVQLAIQTYEMVDKYIRKLD 100 (267)
Q Consensus 80 EKv~LA~~a~dlVd~hirrLD 100 (267)
+||.=-......+...+..|+
T Consensus 1023 ~kv~~L~~e~~~L~qq~~~l~ 1043 (1080)
T 2dfs_A 1023 QLVSELKEQNTLLKTEKEELN 1043 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333
No 183
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=28.06 E-value=21 Score=23.16 Aligned_cols=42 Identities=19% Similarity=0.453 Sum_probs=24.2
Q ss_pred cee-ecCCCCCCCcccccCCCCCCcceecccCc-------cCCCC----CCceeCcCCc
Q psy12696 215 TYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS-------LTTKP----KGKWYCPKCT 261 (267)
Q Consensus 215 ~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~-------l~~~p----~~~w~C~~C~ 261 (267)
..| .|+++-++..|...+. . ||..|.. |.... .+..||..|-
T Consensus 6 ~~C~~C~~~I~~~~~~a~~~----~-~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y 59 (66)
T 1nyp_A 6 PICGACRRPIEGRVVNAMGK----Q-WHVEHFVCAKCEKPFLGHRHYERKGLAYCETHY 59 (66)
T ss_dssp CEETTTTEECCSCEECCTTS----B-EETTTCBCTTTCCBCSSSCCEEETTEEECHHHH
T ss_pred CCCcccCCEecceEEEECcc----c-cccCcCEECCCCCCCCCCceEeECCcEECHHHH
Confidence 356 7877766666655442 3 5877754 22211 4667887664
No 184
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=27.85 E-value=3.3e+02 Score=25.40 Aligned_cols=45 Identities=13% Similarity=0.386 Sum_probs=23.6
Q ss_pred HHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 68 QKYFDKTKEYGDDKVQ--LAIQTYEMVDKYIRKLDTDLARFEQEIQEK 113 (267)
Q Consensus 68 ~~~~~~~~~lsdEKv~--LA~~a~dlVd~hirrLD~dl~~~e~el~~~ 113 (267)
.+.+++...+-.|-+. +.+.+ ..|..-+..+...+.+|+..+...
T Consensus 143 ~~mle~~~~~~~~~~~~~~~~~i-~~l~~~~~~~~~~i~~l~~~~~~~ 189 (461)
T 3ghg_B 143 SSELEKHQLYIDETVNSNIPTNL-RVLRSILENLRSKIQKLESDVSAQ 189 (461)
T ss_dssp HHHHHHHHTHHHHHHHTHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhccchhHH-HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444444444333233 33333 334444667777777787776654
No 185
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.77 E-value=14 Score=25.41 Aligned_cols=33 Identities=27% Similarity=0.553 Sum_probs=25.5
Q ss_pred CCCcee-ecCCCCCC---CcccccCCCCCCcceecccCcc
Q psy12696 212 NEPTYC-VCQQVSYG---EMIGCDNPDCPIEWFHFACVSL 247 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~---~mi~Cd~~~c~~~wfH~~Cv~l 247 (267)
..+++| +|+..-+| +-+.|..|. + -+|-.|+..
T Consensus 26 ~~pt~C~~C~~~lwGl~kqG~~C~~C~--~-~~Hk~C~~~ 62 (74)
T 2db6_A 26 KKPKFCDVCARMIVLNNKFGLRCKNCK--T-NIHEHCQSY 62 (74)
T ss_dssp SSCEECSSSCCEECHHHHEEEEESSSC--C-EECTTTTGG
T ss_pred CCCcCchhcChhhccccCCccccCCCC--C-ccChhHHhh
Confidence 457899 99888765 567899955 4 499999874
No 186
>4g2k_A General control protein GCN4, envelope glycoprote chimera; GP2-GCN4 fusion, viral protein; 1.90A {Saccharomyces cerevisiae}
Probab=27.33 E-value=1.9e+02 Score=21.99 Aligned_cols=44 Identities=23% Similarity=0.272 Sum_probs=27.4
Q ss_pred HHHHHHHhhcchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 6 LEQYLDSLDSLPIELQRNFTLMRELDSRAQDVMKTIDRVAEDYL 49 (267)
Q Consensus 6 Ledfld~ie~LP~El~r~l~~irelD~~~~~~~~~i~~~~~~~~ 49 (267)
+|+.+..+-++-+|+.|.-.+|.-|...++.+.+.....+..+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~ig~L~~~l~~~aN~T~~aL~~L~ 66 (125)
T 4g2k_A 23 IEEILSKIYHIENEIARIKKLIGNLVSRLRRLANQTAKSLELLL 66 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555566677777777777777777777666555444444333
No 187
>2bzb_A Conserved domain protein; transferase, phosphatase, phosphorylation, sporulation, antithetical, negative, regulator, spine; NMR {Bacillus anthracis} SCOP: a.30.7.1
Probab=27.27 E-value=1.1e+02 Score=20.31 Aligned_cols=45 Identities=9% Similarity=0.130 Sum_probs=32.0
Q ss_pred HHHHHHhhcchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy12696 7 EQYLDSLDSLPIELQRNFTLMRELDSRAQDVMKTIDRVAEDYLDN 51 (267)
Q Consensus 7 edfld~ie~LP~El~r~l~~irelD~~~~~~~~~i~~~~~~~~k~ 51 (267)
+.....|+.+=.++......-+-.|.++-.+..+||.++..|.+.
T Consensus 4 ~~L~~~IE~kR~eL~~l~~k~Gl~~~~vI~~SQeLD~LIn~Y~k~ 48 (62)
T 2bzb_A 4 GQLKNKIENKKKELIQLVARHGLDHDKVLLFSRDLDKLINKFMNV 48 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666776666655556788888888888888888753
No 188
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=27.11 E-value=2.3e+02 Score=22.20 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=27.0
Q ss_pred HHHHHHHHhcCCC--ChhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q psy12696 43 RVAEDYLDNMKHY--SKDKKKETLAEIQKYFDKTKEYGDDKVQLAIQTYEMVDK 94 (267)
Q Consensus 43 ~~~~~~~k~~~~~--~~~~~~~~~~~I~~~~~~~~~lsdEKv~LA~~a~dlVd~ 94 (267)
+.+..+|.....+ +++...+.+.+++..+..+-.--.++|.-+...+..|+.
T Consensus 71 kqIe~LIdsLPg~~~seeeQ~~ri~~Le~E~~~~~~el~~~v~eae~ll~~v~~ 124 (151)
T 1yke_B 71 RQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLLRHVDS 124 (151)
T ss_dssp HHHHHHHHHCTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666554 344444555555555555555445555444444444444
No 189
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=27.10 E-value=62 Score=22.18 Aligned_cols=46 Identities=22% Similarity=0.579 Sum_probs=26.3
Q ss_pred CCcee-ecCCCCC-CCc--ccccCCCCCCcceecccCc-cCCCCCCceeCcCCcCcc
Q psy12696 213 EPTYC-VCQQVSY-GEM--IGCDNPDCPIEWFHFACVS-LTTKPKGKWYCPKCTSDR 264 (267)
Q Consensus 213 ~~~~C-~C~~~~~-~~m--i~Cd~~~c~~~wfH~~Cv~-l~~~p~~~w~C~~C~~~~ 264 (267)
+...| +|-.+.. .++ ..| . |- .-|+..|+. +.. .+.+.||.|+..-
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~-~--CG-H~fC~~Cl~~~~~--~~~~~CP~CR~~~ 60 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPC-T--CG-YQICRFCWHRIRT--DENGLCPACRKPY 60 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSS-T--TS-CCCCHHHHHHHTT--SSCSBCTTTCCBC
T ss_pred cCCcCCccCccCcccccccccc-C--CC-CCcCHHHHHHHHh--cCCCCCCCCCCcc
Confidence 45668 9987643 222 222 1 22 238888875 221 2468999998653
No 190
>2l5g_A GPS2 protein, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=26.99 E-value=1.1e+02 Score=18.36 Aligned_cols=24 Identities=33% Similarity=0.278 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHH
Q psy12696 62 ETLAEIQKYFDKTKEYGDDKVQLA 85 (267)
Q Consensus 62 ~~~~~I~~~~~~~~~lsdEKv~LA 85 (267)
+.-.+|...-.+...|.+||-+|-
T Consensus 12 EtkeQi~~l~~kl~~LkeEKHQLF 35 (38)
T 2l5g_A 12 ETKEQILKLEEKLLALQEEKHQLF 35 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344567777788888889998764
No 191
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=26.77 E-value=1.4e+02 Score=20.99 Aligned_cols=38 Identities=16% Similarity=0.151 Sum_probs=18.4
Q ss_pred HHHHHHHHhhcchHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy12696 5 YLEQYLDSLDSLPIELQRNFTLMRELDSRAQDVMKTID 42 (267)
Q Consensus 5 yLedfld~ie~LP~El~r~l~~irelD~~~~~~~~~i~ 42 (267)
+|..-++.|..|-.+.++...++..|-.+.+.+..+|.
T Consensus 46 iL~~A~~YI~~L~~~~~~l~~~~~~L~~~n~~L~~rl~ 83 (88)
T 1nkp_A 46 ILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLE 83 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444555555555555544444444444444444443
No 192
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=26.76 E-value=18 Score=29.34 Aligned_cols=14 Identities=14% Similarity=0.546 Sum_probs=11.0
Q ss_pred CCCCceeCcCCcCc
Q psy12696 250 KPKGKWYCPKCTSD 263 (267)
Q Consensus 250 ~p~~~w~C~~C~~~ 263 (267)
...|.|+|+.|...
T Consensus 55 ~~~g~~~CekC~~~ 68 (172)
T 3u50_C 55 YHGDSFFCESCQQF 68 (172)
T ss_dssp ETTTEEEETTTTEE
T ss_pred CCCCeEECCCCCCC
Confidence 34688999999764
No 193
>3fxb_A Trap dicarboxylate transporter, DCTP subunit; periplasmic substrate binding protein, selectivity helix, TR membrane; HET: 4CS; 2.90A {Silicibacter pomeroyi dss-3}
Probab=25.91 E-value=3.2e+02 Score=23.54 Aligned_cols=17 Identities=29% Similarity=0.155 Sum_probs=13.3
Q ss_pred HHhhcchHHHHHhHHHH
Q psy12696 11 DSLDSLPIELQRNFTLM 27 (267)
Q Consensus 11 d~ie~LP~El~r~l~~i 27 (267)
+..+.||.|.|..|...
T Consensus 232 ~~w~~L~~e~q~~i~~a 248 (326)
T 3fxb_A 232 DFYDGLSAEDQQLVQNA 248 (326)
T ss_dssp HHHHHSCHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHH
Confidence 45678999999887764
No 194
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=25.68 E-value=47 Score=23.49 Aligned_cols=12 Identities=33% Similarity=1.196 Sum_probs=9.8
Q ss_pred CCceeCcCCcCc
Q psy12696 252 KGKWYCPKCTSD 263 (267)
Q Consensus 252 ~~~w~C~~C~~~ 263 (267)
.+.|.||.|...
T Consensus 58 PddW~CPvCga~ 69 (81)
T 2kn9_A 58 PDDWSCPDCGAA 69 (81)
T ss_dssp CTTCCCTTTCCC
T ss_pred CCCCcCCCCCCC
Confidence 568999999764
No 195
>2dmj_A Poly (ADP-ribose) polymerase family, member 1; zinc finger, PARP-1, ADPRT, NAD(+) ADP-ribosyltransferase 1, poly(ADP-ribose) synthetase 1; NMR {Homo sapiens}
Probab=25.66 E-value=14 Score=27.49 Aligned_cols=9 Identities=44% Similarity=1.556 Sum_probs=8.0
Q ss_pred cceecccCc
Q psy12696 238 EWFHFACVS 246 (267)
Q Consensus 238 ~wfH~~Cv~ 246 (267)
.|||+.|+.
T Consensus 57 ~W~H~~Cf~ 65 (106)
T 2dmj_A 57 HWYHFSCFW 65 (106)
T ss_dssp EEEETTHHH
T ss_pred EeECcCccc
Confidence 599999986
No 196
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.64 E-value=40 Score=23.41 Aligned_cols=43 Identities=26% Similarity=0.496 Sum_probs=26.1
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCc-------cCCC----CCCceeCcCCc
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS-------LTTK----PKGKWYCPKCT 261 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~-------l~~~----p~~~w~C~~C~ 261 (267)
...| .|+++-.+..|...+ .-||..|.. |... ..+..||..|-
T Consensus 25 ~~~C~~C~~~I~~~~v~a~~-----~~~H~~CF~C~~C~~~L~~~~f~~~~g~~yC~~cy 79 (90)
T 2dar_A 25 TPMCAHCNQVIRGPFLVALG-----KSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCY 79 (90)
T ss_dssp CCBBSSSCCBCCSCEEEETT-----EEECTTTCBCSSSCCBCSSSCBEESSSCEECHHHH
T ss_pred CCCCccCCCEecceEEEECC-----ccccccCCccCCCCCCCCCCEeEeECCEEECHHHH
Confidence 4467 888887776665554 235776654 2221 25677887764
No 197
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=25.64 E-value=1.4e+02 Score=23.09 Aligned_cols=23 Identities=22% Similarity=0.277 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHH
Q psy12696 61 KETLAEIQKYFDKTKEYGDDKVQ 83 (267)
Q Consensus 61 ~~~~~~I~~~~~~~~~lsdEKv~ 83 (267)
...+..|......+..+..+|-.
T Consensus 133 ~~rl~eL~~~W~~L~~~~~~R~~ 155 (161)
T 3lbx_A 133 KAHIEELRHLWDLLLELTLEKGD 155 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555533
No 198
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=25.46 E-value=12 Score=27.91 Aligned_cols=44 Identities=18% Similarity=0.449 Sum_probs=25.2
Q ss_pred cee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCcc
Q psy12696 215 TYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSDR 264 (267)
Q Consensus 215 ~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~~ 264 (267)
..| +|.......++. .|. .-||..|+.-... .+...||.|+..-
T Consensus 53 ~~C~IC~~~~~~p~~~--~Cg---H~fC~~Ci~~~~~-~~~~~CP~Cr~~~ 97 (124)
T 3fl2_A 53 FQCICCQELVFRPITT--VCQ---HNVCKDCLDRSFR-AQVFSCPACRYDL 97 (124)
T ss_dssp TBCTTTSSBCSSEEEC--TTS---CEEEHHHHHHHHH-TTCCBCTTTCCBC
T ss_pred CCCCcCChHHcCcEEe--eCC---CcccHHHHHHHHh-HCcCCCCCCCccC
Confidence 457 887764433221 333 3599999852111 2346899998653
No 199
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=25.41 E-value=52 Score=22.47 Aligned_cols=13 Identities=31% Similarity=0.971 Sum_probs=10.1
Q ss_pred CCceeCcCCcCcc
Q psy12696 252 KGKWYCPKCTSDR 264 (267)
Q Consensus 252 ~~~w~C~~C~~~~ 264 (267)
.+.|.||.|....
T Consensus 38 Pddw~CP~Cga~K 50 (70)
T 1dx8_A 38 SDSFMCPACRSPK 50 (70)
T ss_dssp CTTCBCTTTCCBG
T ss_pred CCCCcCCCCCCCH
Confidence 5689999997643
No 200
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.40 E-value=73 Score=21.41 Aligned_cols=43 Identities=26% Similarity=0.605 Sum_probs=24.5
Q ss_pred ee-ecCCCCC--CCcccccCCCCCCcceecccCc-------cCCCC----CCceeCcCCcCc
Q psy12696 216 YC-VCQQVSY--GEMIGCDNPDCPIEWFHFACVS-------LTTKP----KGKWYCPKCTSD 263 (267)
Q Consensus 216 ~C-~C~~~~~--~~mi~Cd~~~c~~~wfH~~Cv~-------l~~~p----~~~w~C~~C~~~ 263 (267)
.| .|+++-. +..|.-.+- . ||..|.. |...+ .+..||..|-..
T Consensus 17 ~C~~C~~~I~~~~~~~~a~~~----~-~H~~CF~C~~C~~~L~~~~f~~~~~~~~C~~c~~~ 73 (82)
T 2ehe_A 17 TCAECQQLIGHDSRELFYEDR----H-FHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCS 73 (82)
T ss_dssp BCTTTCCBCCSSCCBCCCSSC----C-CBTTTSBCTTTCCBCSSCCEEEETTEEEETTTSSC
T ss_pred cCccCCCccccCcEEEEeCCc----c-ccccCCeecCCCCccCCCccEeeCCEEECHHHHhh
Confidence 46 7777755 444444432 3 5776654 33222 567889888654
No 201
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.04 E-value=53 Score=22.82 Aligned_cols=42 Identities=29% Similarity=0.641 Sum_probs=23.8
Q ss_pred Ccee-ecCCCCC-CCcccccCCCCCCcceecccCc-------cCCC----CCCceeCcCC
Q psy12696 214 PTYC-VCQQVSY-GEMIGCDNPDCPIEWFHFACVS-------LTTK----PKGKWYCPKC 260 (267)
Q Consensus 214 ~~~C-~C~~~~~-~~mi~Cd~~~c~~~wfH~~Cv~-------l~~~----p~~~w~C~~C 260 (267)
...| .|+++-+ +++|.-.+ .-||..|.. |... ..+..||..|
T Consensus 15 ~~~C~~C~~~I~~~~~v~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~ 69 (91)
T 2d8y_A 15 RETCVECQKTVYPMERLLANQ-----QVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPH 69 (91)
T ss_dssp SCBCTTTCCBCCTTSEEECSS-----SEEETTTCBCTTTCCBCCTTTCCCSSSCCCCHHH
T ss_pred CCcCccCCCccCCceeEEECC-----CEECCCCCeeCCCCCCCCCCCcEeECCEEECHHH
Confidence 4467 8888765 46665444 235877754 2221 1456777665
No 202
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.84 E-value=51 Score=21.96 Aligned_cols=42 Identities=29% Similarity=0.633 Sum_probs=25.8
Q ss_pred cee-ecCCCCC-CCcccccCCCCCCcceecccCc-------cCCCC----CCceeCc-CCc
Q psy12696 215 TYC-VCQQVSY-GEMIGCDNPDCPIEWFHFACVS-------LTTKP----KGKWYCP-KCT 261 (267)
Q Consensus 215 ~~C-~C~~~~~-~~mi~Cd~~~c~~~wfH~~Cv~-------l~~~p----~~~w~C~-~C~ 261 (267)
..| .|+++-+ +++|.-.+ .-||..|.. |.... .+..||. .|-
T Consensus 10 ~~C~~C~~~I~~~~~v~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~cy 65 (76)
T 2cu8_A 10 SKCPKCDKTVYFAEKVSSLG-----KDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCY 65 (76)
T ss_dssp CBCTTTCCBCCTTTEEEETT-----EEEETTTCBCSSSCCBCCTTSCEEETTEEECTTTHH
T ss_pred CCCcCCCCEeECCeEEEECC-----eEeeCCCCCCCCCCCccCCCceEeECCEEecchHHH
Confidence 357 8888765 67766554 236877654 22222 5678888 574
No 203
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=24.50 E-value=34 Score=30.78 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=26.2
Q ss_pred CCCCcee-ecCCCCCC---CcccccCCCCCCcceecccCcc
Q psy12696 211 PNEPTYC-VCQQVSYG---EMIGCDNPDCPIEWFHFACVSL 247 (267)
Q Consensus 211 ~~~~~~C-~C~~~~~~---~mi~Cd~~~c~~~wfH~~Cv~l 247 (267)
...+++| .|+..-+| .-..|..|. ..+|..|...
T Consensus 354 ~~~~t~C~~C~~~~~g~~~qg~~C~~C~---~~~h~~C~~~ 391 (406)
T 2vrw_B 354 FEETTSCKACQMLLRGTFYQGYRCYRCR---APAHKECLGR 391 (406)
T ss_dssp CSSCCBCTTTCCBCCSSSSCEEEETTTC---CEECGGGGGG
T ss_pred CCCCCCCccccchhceeCCCCCCCCCCc---Cccchhhhhh
Confidence 3568899 89887665 456799977 6799999873
No 204
>4b2u_A S67; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=24.50 E-value=13 Score=21.40 Aligned_cols=14 Identities=43% Similarity=1.246 Sum_probs=9.1
Q ss_pred CCceeCcCCcCccc
Q psy12696 252 KGKWYCPKCTSDRK 265 (267)
Q Consensus 252 ~~~w~C~~C~~~~~ 265 (267)
.|+|-|-.|..+.+
T Consensus 16 egdwcchkcvpegk 29 (36)
T 4b2u_A 16 EGDWCCHKCVPEGK 29 (36)
T ss_dssp GCCSSSSEEEEETT
T ss_pred ccCeeeecccccCc
Confidence 56777777765544
No 205
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.11 E-value=29 Score=22.69 Aligned_cols=41 Identities=22% Similarity=0.566 Sum_probs=22.4
Q ss_pred ee-ecCCCCCCCcccccCCCCCCcceecccCc-------cCCC----CCCceeCcCCc
Q psy12696 216 YC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS-------LTTK----PKGKWYCPKCT 261 (267)
Q Consensus 216 ~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~-------l~~~----p~~~w~C~~C~ 261 (267)
.| .|+++-+++.|.-.+ .-||..|.. |... ..+..||..|-
T Consensus 7 ~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy 59 (69)
T 2cur_A 7 GCVKCNKAITSGGITYQD-----QPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCY 59 (69)
T ss_dssp CCSSSCCCCCTTCEEETT-----EEECTTTTBCTTTCCBCTTSCEEECSSCEEEHHHH
T ss_pred CCcccCCEeCcceEEECc-----cccccCcCEECCCCCCCCCCccEeECCEEECHHHh
Confidence 46 777776655554443 235766644 2221 14667887664
No 206
>3agt_A Hemerythrin-like domain protein DCRH; metal binding protein, oxygen binding, DIIRON, four-helix BU; 1.40A {Desulfovibrio vulgaris} PDB: 2awy_A 2avk_A 3agu_A 2awc_A
Probab=24.11 E-value=2.2e+02 Score=21.12 Aligned_cols=44 Identities=9% Similarity=0.027 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 64 LAEIQKYFDKTKEYG-DDKVQLAIQTYEMVDKYIRKLDTDLARFE 107 (267)
Q Consensus 64 ~~~I~~~~~~~~~ls-dEKv~LA~~a~dlVd~hirrLD~dl~~~e 107 (267)
+.+|.........-. .-...|..-+.+.+-.||...|..+..+-
T Consensus 86 ~~~v~~l~~~~~~g~~~~~~~l~~~L~~Wl~~HI~~~D~~~~~~l 130 (136)
T 3agt_A 86 VETVLKWEKQLAAGDPEVVMTTLRGLVDWLVNHIMKEDKKYEAYL 130 (136)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHhHHHhHHHHHHH
Confidence 344555444443311 12335677778889999999999988764
No 207
>1uw0_A DNA ligase III; DNA repair, zinc finger, PARP-like finger, cell division, DNA replication, nuclear protein; HET: DNA; NMR {Homo sapiens} SCOP: g.39.1.12
Probab=23.87 E-value=12 Score=28.28 Aligned_cols=9 Identities=44% Similarity=1.472 Sum_probs=8.1
Q ss_pred cceecccCc
Q psy12696 238 EWFHFACVS 246 (267)
Q Consensus 238 ~wfH~~Cv~ 246 (267)
.|||+.|+.
T Consensus 49 ~W~H~~Cf~ 57 (117)
T 1uw0_A 49 EWYHIKCMF 57 (117)
T ss_dssp CBCCHHHHH
T ss_pred eeECcccch
Confidence 699999986
No 208
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.75 E-value=50 Score=21.59 Aligned_cols=42 Identities=24% Similarity=0.594 Sum_probs=23.0
Q ss_pred cee-ecCCCCC--CCcccccCCCCCCcceecccCc-------cCCCC----CCceeCcCCc
Q psy12696 215 TYC-VCQQVSY--GEMIGCDNPDCPIEWFHFACVS-------LTTKP----KGKWYCPKCT 261 (267)
Q Consensus 215 ~~C-~C~~~~~--~~mi~Cd~~~c~~~wfH~~Cv~-------l~~~p----~~~w~C~~C~ 261 (267)
..| .|+++-+ +..|.-.+- -||..|.. |...+ .+..||..|-
T Consensus 6 ~~C~~C~~~I~~~~~~~~a~~~-----~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy 61 (72)
T 1wyh_A 6 SGCSACGETVMPGSRKLEYGGQ-----TWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCY 61 (72)
T ss_dssp CBCSSSCCBCCSSSCEECSTTC-----CEETTTCBCTTTCCBTTTSCEEEETTEEEEHHHH
T ss_pred CCCccCCCccccCccEEEECcc-----ccCcccCeECCCCCcCCCCccCCcCCeEECHHHH
Confidence 356 8888765 455544442 26877754 22222 4566776653
No 209
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=23.68 E-value=53 Score=23.56 Aligned_cols=12 Identities=33% Similarity=1.243 Sum_probs=9.7
Q ss_pred CCceeCcCCcCc
Q psy12696 252 KGKWYCPKCTSD 263 (267)
Q Consensus 252 ~~~w~C~~C~~~ 263 (267)
.+.|.||.|...
T Consensus 66 PddW~CPvCga~ 77 (87)
T 1s24_A 66 PDDWCCPDCGAT 77 (87)
T ss_dssp CTTCCCSSSCCC
T ss_pred CCCCCCCCCCCC
Confidence 568999999764
No 210
>2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd}
Probab=23.64 E-value=2.2e+02 Score=20.78 Aligned_cols=93 Identities=13% Similarity=0.184 Sum_probs=54.3
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH--HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q psy12696 18 IELQRNFTLMRELDSRAQDVMKTIDRVAEDYLDNMKHYSKDKKK--ETLAEIQKYFDKTKEYGDDKVQLAIQTYEMVDKY 95 (267)
Q Consensus 18 ~El~r~l~~irelD~~~~~~~~~i~~~~~~~~k~~~~~~~~~~~--~~~~~I~~~~~~~~~lsdEKv~LA~~a~dlVd~h 95 (267)
.-|...-..+-.+|.-+-.+-..+....+..-++.+.+..+.+. +.-.++.....++.+--.|=-+++.+.-+|+.+
T Consensus 13 ~~~~~~~~~~~ri~~aig~~d~ri~~NtqaI~~NS~aiaanTr~lQqh~aRlnsqQrQI~ENhkEMKq~aaqsaaLlsk- 91 (114)
T 2xzr_A 13 SKIYHIENEIARIKKLIGAIDGRVTRNTQSIEKNSKAIAANTRTLQQHSARLDSQQRQINENHKEMKQIEDKIEEILSK- 91 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHhcchHHHHHHHHhhhhHHHHhhHHHHHhchHHHHHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 33443334444444444444444444444433333333333322 233467777777778888888899999888887
Q ss_pred HHHHHHHHHHHHHHHH
Q psy12696 96 IRKLDTDLARFEQEIQ 111 (267)
Q Consensus 96 irrLD~dl~~~e~el~ 111 (267)
+..|+.++..+..-+.
T Consensus 92 ~yh~ene~ar~kkl~~ 107 (114)
T 2xzr_A 92 IYHIENEIARIKKLIK 107 (114)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHH
Confidence 6788888887775554
No 211
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=23.40 E-value=74 Score=21.65 Aligned_cols=22 Identities=9% Similarity=0.289 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy12696 25 TLMRELDSRAQDVMKTIDRVAE 46 (267)
Q Consensus 25 ~~irelD~~~~~~~~~i~~~~~ 46 (267)
..+++-|...+.+..++++...
T Consensus 32 ~~L~~kd~eI~eLr~~LdK~qs 53 (67)
T 1zxa_A 32 KRLSEKEEEIQELKRKLHKCQS 53 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555554333
No 212
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=23.29 E-value=2.3e+02 Score=20.95 Aligned_cols=54 Identities=19% Similarity=0.300 Sum_probs=28.6
Q ss_pred HhhcchHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---HHHHhcCCCChhHHHHHHHHHHHHHHHHHHh
Q psy12696 12 SLDSLPIELQRNFTLMRELDSRAQDVMKTIDRVAE---DYLDNMKHYSKDKKKETLAEIQKYFDKTKEY 77 (267)
Q Consensus 12 ~ie~LP~El~r~l~~irelD~~~~~~~~~i~~~~~---~~~k~~~~~~~~~~~~~~~~I~~~~~~~~~l 77 (267)
++.+|-.||...=..|.+|-.++.++...++.... -|+ ..++.|.-..+.+.++
T Consensus 5 s~~al~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkERDFYF------------~KLRdIEiLcQe~~~~ 61 (106)
T 4e61_A 5 SLVAIQAELTKSQETIGSLNEEIEQYKGTVSTLEIEREFYF------------NKLRDIEILVHTTQDL 61 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHh
Confidence 44555556665555666666665555555443322 133 3455666666665544
No 213
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=23.27 E-value=24 Score=25.49 Aligned_cols=44 Identities=18% Similarity=0.335 Sum_probs=25.6
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
...| +|....... +....|. ..||..|+.-... ....||.|+..
T Consensus 15 ~~~C~IC~~~~~~p-~~~~~Cg---H~fC~~Ci~~~~~--~~~~CP~Cr~~ 59 (108)
T 2ckl_A 15 HLMCVLCGGYFIDA-TTIIECL---HSFCKTCIVRYLE--TSKYCPICDVQ 59 (108)
T ss_dssp GTBCTTTSSBCSSE-EEETTTC---CEEEHHHHHHHHT--SCSBCTTTCCB
T ss_pred cCCCccCChHHhCc-CEeCCCC---ChhhHHHHHHHHH--hCCcCcCCCcc
Confidence 4567 887664432 3333333 4699999862111 12679999764
No 214
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=23.25 E-value=2.5e+02 Score=21.34 Aligned_cols=55 Identities=15% Similarity=0.210 Sum_probs=34.4
Q ss_pred HHHHHHHHhcCCC--ChhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q psy12696 43 RVAEDYLDNMKHY--SKDKKKETLAEIQKYFDKTKEYGDDKVQLAIQTYEMVDKYIR 97 (267)
Q Consensus 43 ~~~~~~~k~~~~~--~~~~~~~~~~~I~~~~~~~~~lsdEKv~LA~~a~dlVd~hir 97 (267)
+.+..+|.....+ +++...+.+.+++..+..+-.--.++|.-+...+..|+.-++
T Consensus 71 kqIe~LIdsLP~~~~see~Q~~ri~~L~~E~~~~~~el~~~v~e~e~ll~~v~~~l~ 127 (132)
T 1ykh_B 71 RQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMIE 127 (132)
T ss_dssp HHHHHHHHHSTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666554 455555666666666666666666666666666666665554
No 215
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=23.23 E-value=60 Score=21.03 Aligned_cols=13 Identities=31% Similarity=1.160 Sum_probs=10.2
Q ss_pred CCceeCcCCcCcc
Q psy12696 252 KGKWYCPKCTSDR 264 (267)
Q Consensus 252 ~~~w~C~~C~~~~ 264 (267)
.+.|.||.|....
T Consensus 34 P~dw~CP~Cga~K 46 (55)
T 2v3b_B 34 PADWVCPDCGVGK 46 (55)
T ss_dssp CTTCCCTTTCCCG
T ss_pred CCCCcCCCCCCCH
Confidence 5689999997653
No 216
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=23.21 E-value=3.1e+02 Score=22.38 Aligned_cols=96 Identities=19% Similarity=0.210 Sum_probs=45.1
Q ss_pred HHHHHHHhhcchHHHH----HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhHHHH
Q psy12696 6 LEQYLDSLDSLPIELQ----RNFTLMRELDSRAQDVMKTIDRVAEDYLDNMKHYSKDKKKETLAEIQKYFDKTKEYGDDK 81 (267)
Q Consensus 6 Ledfld~ie~LP~El~----r~l~~irelD~~~~~~~~~i~~~~~~~~k~~~~~~~~~~~~~~~~I~~~~~~~~~lsdEK 81 (267)
|++|.++--.|=.||- +.=..+++|-.++..+..+++....+|-.. .......|...-.++..+...+
T Consensus 33 l~EFqesSrELE~ELE~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~--------~~e~~~~~~~Lq~el~~l~~~~ 104 (189)
T 2v71_A 33 LVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQ--------YAQSYKQVSVLEDDLSQTRAIK 104 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHH
Confidence 5677776666655555 222344455555555555555554444321 1122223444334444444444
Q ss_pred HHHHH------HHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 82 VQLAI------QTYEMVDKYIRKLDTDLARFEQE 109 (267)
Q Consensus 82 v~LA~------~a~dlVd~hirrLD~dl~~~e~e 109 (267)
-.+.. ++.|-+++..|-+-.-+..|+.-
T Consensus 105 ~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~k 138 (189)
T 2v71_A 105 EQLHKYVRELEQANDDLERAKRATIMSLEDFEQR 138 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHH
Confidence 33333 33444666666555544444433
No 217
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=23.15 E-value=20 Score=27.95 Aligned_cols=44 Identities=23% Similarity=0.498 Sum_probs=25.6
Q ss_pred Ccee-ecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCc
Q psy12696 214 PTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSD 263 (267)
Q Consensus 214 ~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~ 263 (267)
...| +|........+ -.|. ..|+..|+.-... .+...||.|+..
T Consensus 78 ~~~C~IC~~~~~~pv~--~~Cg---H~fC~~Ci~~~~~-~~~~~CP~Cr~~ 122 (150)
T 1z6u_A 78 SFMCVCCQELVYQPVT--TECF---HNVCKDCLQRSFK-AQVFSCPACRHD 122 (150)
T ss_dssp HTBCTTTSSBCSSEEE--CTTS---CEEEHHHHHHHHH-TTCCBCTTTCCB
T ss_pred CCEeecCChhhcCCEE--cCCC---CchhHHHHHHHHH-hCCCcCCCCCcc
Confidence 3467 88776443332 1333 3599999862111 234689999764
No 218
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=23.12 E-value=2.1e+02 Score=20.51 Aligned_cols=98 Identities=15% Similarity=0.220 Sum_probs=58.7
Q ss_pred cchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcCCCChhHHHHHHH-----HHHHHHHHHHHhHHHHHH
Q psy12696 15 SLPIELQRNFTLMRELDSRAQDVMKTIDRVAEDYL------DNMKHYSKDKKKETLA-----EIQKYFDKTKEYGDDKVQ 83 (267)
Q Consensus 15 ~LP~El~r~l~~irelD~~~~~~~~~i~~~~~~~~------k~~~~~~~~~~~~~~~-----~I~~~~~~~~~lsdEKv~ 83 (267)
+||.+++..+..+..+-.+++.+..++.......- .....++++.+. +. -|......+....++++.
T Consensus 3 ~~~~e~Q~~i~~~~~l~~~~~~l~~q~~~l~~~~~e~~~~~~eL~~l~~d~~v--y~~iG~vfv~~~~~ea~~~L~~~~e 80 (117)
T 2zqm_A 3 NIPPQVQAMLGQLESYQQQLQLVVQQKQKVQLELTEAKKALDEIESLPDDAVV--YKTVGTLIVKTTKDKAVAELKEKIE 80 (117)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCE--EEEETTEEEEECHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHh--HHHhhHHHhhccHHHHHHHHHHHHH
Confidence 67888888888888888888877777654322211 111122221100 00 022234445555556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 84 LAIQTYEMVDKYIRKLDTDLARFEQEIQEKA 114 (267)
Q Consensus 84 LA~~a~dlVd~hirrLD~dl~~~e~el~~~~ 114 (267)
-.....+-+++.+..|...+..+...+....
T Consensus 81 ~ie~~i~~le~~~~~l~~~l~~lk~~l~~~~ 111 (117)
T 2zqm_A 81 TLEVRLNALERQEKKLNEKLKELTAQIQSAL 111 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677777788888888888888888777643
No 219
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=23.07 E-value=37 Score=28.00 Aligned_cols=10 Identities=30% Similarity=0.723 Sum_probs=8.2
Q ss_pred eeCcCCcCcc
Q psy12696 255 WYCPKCTSDR 264 (267)
Q Consensus 255 w~C~~C~~~~ 264 (267)
|.||.|....
T Consensus 187 ~~CP~C~~~k 196 (202)
T 1yuz_A 187 EKCPICFRPK 196 (202)
T ss_dssp SBCTTTCCBG
T ss_pred CCCCCCCCCh
Confidence 9999997654
No 220
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=23.06 E-value=25 Score=21.88 Aligned_cols=11 Identities=55% Similarity=1.654 Sum_probs=9.0
Q ss_pred CCceeCc--CCcC
Q psy12696 252 KGKWYCP--KCTS 262 (267)
Q Consensus 252 ~~~w~C~--~C~~ 262 (267)
.|+|.|+ .|..
T Consensus 12 ~GDW~C~~~~C~~ 24 (45)
T 1n0z_A 12 DGDWICPDKKCGN 24 (45)
T ss_dssp SSSCBCSSTTTCC
T ss_pred CCCcCCCCCCCCC
Confidence 6899999 7854
No 221
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=22.77 E-value=27 Score=23.30 Aligned_cols=47 Identities=19% Similarity=0.593 Sum_probs=28.7
Q ss_pred Ccee-ecCCCCCCC--cccccCCCCCCcceecccCc-cCCCC-CCceeCcCCcCc
Q psy12696 214 PTYC-VCQQVSYGE--MIGCDNPDCPIEWFHFACVS-LTTKP-KGKWYCPKCTSD 263 (267)
Q Consensus 214 ~~~C-~C~~~~~~~--mi~Cd~~~c~~~wfH~~Cv~-l~~~p-~~~w~C~~C~~~ 263 (267)
...| +|.+..|.+ =-.|..|. . -|=..|=| ++..+ .-.|.|..|+..
T Consensus 9 ~~~C~iC~KTKFADG~Gh~C~yCk--~-r~CaRCGg~v~lr~~k~~WvC~lC~k~ 60 (62)
T 2a20_A 9 APTCGICHKTKFADGCGHNCSYCQ--T-KFCARCGGRVSLRSNKVMWVCNLCRKQ 60 (62)
T ss_dssp CCCCSSSSCSCCCSSCCEEBTTTC--C-EECTTSEEEEESSTTCEEEEEHHHHHH
T ss_pred cchhhhhccceeccCCCccccccC--C-eeecccCCEeeecCCeEEEEehhhhhc
Confidence 3467 998887644 33366643 3 36666766 33233 567999998754
No 222
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=22.60 E-value=1.1e+02 Score=22.32 Aligned_cols=47 Identities=19% Similarity=0.492 Sum_probs=28.2
Q ss_pred CCCCceeecCCCCCCCcccccCCCCCCcceecccCccCCCCCCceeCcCCcCcc
Q psy12696 211 PNEPTYCVCQQVSYGEMIGCDNPDCPIEWFHFACVSLTTKPKGKWYCPKCTSDR 264 (267)
Q Consensus 211 ~~~~~~C~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l~~~p~~~w~C~~C~~~~ 264 (267)
-..+..|-|.=..+..+|.|.+ ..+=+.|+.+ --.-.=+|+.|...-
T Consensus 25 ~~G~~nCKsCWf~~k~LV~C~d-----HYLCl~CLtl--mL~~SdrCpIC~~pL 71 (99)
T 2ko5_A 25 HLGPQFCKSCWFENKGLVECNN-----HYLCLNCLTL--LLSVSNRCPICKMPL 71 (99)
T ss_dssp CSCCCCCCSSCSCCSSEEECSS-----CEEEHHHHHH--TCSSSSEETTTTEEC
T ss_pred ccCcccChhhccccCCeeeecc-----hhhHHHHHHH--HHhhccCCcccCCcC
Confidence 3456678666666677888887 2344455542 112235899997543
No 223
>3lt7_A Adhesin YADA; adhesion, coiled coil, trimeric autotransporter, cell adhesi membrane, cell outer membrane, membrane, plasmid, virulence; 1.50A {Yersinia enterocolitica} PDB: 3lt6_A* 3h7z_A 3h7x_A
Probab=22.59 E-value=1.8e+02 Score=19.51 Aligned_cols=44 Identities=16% Similarity=0.314 Sum_probs=31.6
Q ss_pred HHHHHHHhHHHHHH-HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 70 YFDKTKEYGDDKVQ-LA----IQTYEMVDKYIRKLDTDLARFEQEIQEK 113 (267)
Q Consensus 70 ~~~~~~~lsdEKv~-LA----~~a~dlVd~hirrLD~dl~~~e~el~~~ 113 (267)
.|..+-.+.|+||. +. +++...-|..+++|+..|.+.+..+...
T Consensus 5 TL~~AN~YTD~~v~n~t~~~l~~AN~YTD~KF~qL~nKi~k~~kr~~aG 53 (64)
T 3lt7_A 5 TLKTANSYTDVTVSNSTKKAIRESNQYTDHKFHQLENRLDKLEKRLLKL 53 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhhhhhhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhh
Confidence 45566677777774 22 5666777888899999988888776653
No 224
>1v9x_A Poly (ADP-ribose) polymerase; PARP, DNA repair, inflammation, cell death, structural genomics; NMR {Arabidopsis thaliana}
Probab=22.40 E-value=15 Score=27.78 Aligned_cols=10 Identities=30% Similarity=0.810 Sum_probs=8.6
Q ss_pred cceecccCcc
Q psy12696 238 EWFHFACVSL 247 (267)
Q Consensus 238 ~wfH~~Cv~l 247 (267)
.|||+.|+..
T Consensus 52 ~W~H~~Cf~~ 61 (114)
T 1v9x_A 52 MWNHASCILK 61 (114)
T ss_dssp EEEEHHHHHT
T ss_pred eeECccccch
Confidence 7999999863
No 225
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.35 E-value=41 Score=21.95 Aligned_cols=41 Identities=20% Similarity=0.416 Sum_probs=23.0
Q ss_pred ee-ecCCCCCCCcccccCCCCCCcceecccCc-------cCCCC----CCceeCcCCc
Q psy12696 216 YC-VCQQVSYGEMIGCDNPDCPIEWFHFACVS-------LTTKP----KGKWYCPKCT 261 (267)
Q Consensus 216 ~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~-------l~~~p----~~~w~C~~C~ 261 (267)
.| .|+++-.+..|.-.+ .-||..|.. |...+ .+..||..|-
T Consensus 7 ~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy 59 (70)
T 2d8z_A 7 GCVQCKKPITTGGVTYRE-----QPWHKECFVCTACRKQLSGQRFTARDDFAYCLNCF 59 (70)
T ss_dssp BCSSSCCBCCSSEEESSS-----SEEETTTSBCSSSCCBCTTSCCEESSSSEECHHHH
T ss_pred CCcccCCeeccceEEECc-----cccCCCCCccCCCCCcCCcCceEeeCCeEECHHHH
Confidence 46 777776655554443 225776654 22222 4677887664
No 226
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=22.11 E-value=1.7e+02 Score=26.93 Aligned_cols=34 Identities=18% Similarity=0.277 Sum_probs=26.7
Q ss_pred HHHhhcchHHHHHhHHHHHHHHHHHHHHHHHHHH
Q psy12696 10 LDSLDSLPIELQRNFTLMRELDSRAQDVMKTIDR 43 (267)
Q Consensus 10 ld~ie~LP~El~r~l~~irelD~~~~~~~~~i~~ 43 (267)
...|++||..+++.+.-|+.|..++..+..+...
T Consensus 82 ~~~i~sLp~~v~~rI~aLk~lQ~e~~~le~ef~~ 115 (417)
T 2ayu_A 82 SGYVGGLPKNVKEKLLSLKTLQSELFEVEKEFQV 115 (417)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467889999999999999988888777665433
No 227
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=21.56 E-value=33 Score=22.32 Aligned_cols=12 Identities=33% Similarity=1.099 Sum_probs=9.8
Q ss_pred CCceeCcCCcCc
Q psy12696 252 KGKWYCPKCTSD 263 (267)
Q Consensus 252 ~~~w~C~~C~~~ 263 (267)
.+.|.||.|...
T Consensus 34 P~dw~CP~Cg~~ 45 (54)
T 4rxn_A 34 PDDWVCPLCGVG 45 (54)
T ss_dssp CTTCBCTTTCCB
T ss_pred CCCCcCcCCCCc
Confidence 467999999765
No 228
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=21.54 E-value=1.6e+02 Score=20.26 Aligned_cols=16 Identities=6% Similarity=0.131 Sum_probs=6.0
Q ss_pred HHHHHHHhhcchHHHH
Q psy12696 6 LEQYLDSLDSLPIELQ 21 (267)
Q Consensus 6 Ledfld~ie~LP~El~ 21 (267)
|..-++.|..|-.+++
T Consensus 42 L~~Ai~YI~~L~~~~~ 57 (83)
T 1nkp_B 42 LDKATEYIQYMRRKNH 57 (83)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 229
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=21.40 E-value=2.1e+02 Score=19.82 Aligned_cols=56 Identities=20% Similarity=0.247 Sum_probs=33.3
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHH---HHHHHHHHHHHHHhH
Q psy12696 20 LQRNFTLMRELDSRAQDVMKTIDRVAEDYLDNMKHYSKDKKKET---LAEIQKYFDKTKEYG 78 (267)
Q Consensus 20 l~r~l~~irelD~~~~~~~~~i~~~~~~~~k~~~~~~~~~~~~~---~~~I~~~~~~~~~ls 78 (267)
+.|.+.++...|.-..= =+.+.+.+++|+...+ ++..|.++ ..+|.+++..++.+.
T Consensus 18 ~ARe~Al~GnYdta~~y-Y~g~~~qI~k~l~~~~--d~~~r~kW~~~~~ei~~E~~~Vk~i~ 76 (78)
T 2rpa_A 18 LAREYALLGNYDSAMVY-YQGVLDQMNKYLYSVK--DTHLRQKWQQVWQEINVEAKQVKDIM 76 (78)
T ss_dssp HHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHTCS--CHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcChHHHHHH-HHHHHHHHHHHHHhcC--CHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 56666777766654432 2335667778887554 44445433 356777777666553
No 230
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=21.32 E-value=2.4e+02 Score=20.49 Aligned_cols=33 Identities=3% Similarity=0.284 Sum_probs=21.0
Q ss_pred hHHHHHHHHhhcchHHHHHhHHHHHHHHHHHHH
Q psy12696 4 SYLEQYLDSLDSLPIELQRNFTLMRELDSRAQD 36 (267)
Q Consensus 4 ~yLedfld~ie~LP~El~r~l~~irelD~~~~~ 36 (267)
.++++|++.|+.+-.+|..+=..|.+|......
T Consensus 5 ~~m~~F~~~v~~I~~~i~~i~~~v~~l~~~~~~ 37 (127)
T 1ez3_A 5 RFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA 37 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367888888876666666655555555544443
No 231
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=21.18 E-value=2.9e+02 Score=21.96 Aligned_cols=33 Identities=18% Similarity=0.258 Sum_probs=24.9
Q ss_pred HHHhcCCCChhHHHHHHHHHHHHHHHHHHhHHH
Q psy12696 48 YLDNMKHYSKDKKKETLAEIQKYFDKTKEYGDD 80 (267)
Q Consensus 48 ~~k~~~~~~~~~~~~~~~~I~~~~~~~~~lsdE 80 (267)
-++...+|+.++|.+.+..|+..+++..+-..|
T Consensus 115 ~vk~d~~Lsg~er~ekL~~~~~ei~e~~k~~~e 147 (161)
T 2ynq_A 115 QIKGDTDLSGDEKQKKLDEIDQEIKEYERERKE 147 (161)
T ss_dssp HHHTCSSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355667888888888888888888887655444
No 232
>2cs2_A Poly [ADP-ribose] polymerase-1; DNA BIND, DNA repair, necrosis, apoptosis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.17 E-value=15 Score=28.51 Aligned_cols=9 Identities=33% Similarity=1.221 Sum_probs=8.0
Q ss_pred cceecccCc
Q psy12696 238 EWFHFACVS 246 (267)
Q Consensus 238 ~wfH~~Cv~ 246 (267)
.|||+.|+.
T Consensus 61 ~W~H~~Cf~ 69 (134)
T 2cs2_A 61 RWYHPGCFV 69 (134)
T ss_dssp EEECHHHHH
T ss_pred eeECcCcCh
Confidence 599999985
No 233
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=21.07 E-value=2.2e+02 Score=20.03 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=22.2
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 74 TKEYGDDKVQLAIQTYEMVDKYIRKLDTDLARFEQEIQ 111 (267)
Q Consensus 74 ~~~lsdEKv~LA~~a~dlVd~hirrLD~dl~~~e~el~ 111 (267)
+...-++++.-.....+.+++.+..+...+..+...+.
T Consensus 66 ~~~~L~~~~e~i~~~i~~le~~~~~~~~~l~~lk~~l~ 103 (107)
T 1fxk_A 66 LTEELQEKLETLQLREKTIERQEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444444445556666777777777777766554
No 234
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=21.03 E-value=2.4e+02 Score=20.36 Aligned_cols=26 Identities=4% Similarity=0.144 Sum_probs=14.6
Q ss_pred hHHHHHhHHHHHHHHHHHHHHHHHHH
Q psy12696 17 PIELQRNFTLMRELDSRAQDVMKTID 42 (267)
Q Consensus 17 P~El~r~l~~irelD~~~~~~~~~i~ 42 (267)
|.|+++-...|+.--..+++.+..|.
T Consensus 8 peElr~Fa~~L~~F~d~Lq~~~~~L~ 33 (94)
T 3fx7_A 8 TEEVREFVGHLERFKELLREEVNSLS 33 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777666665555444444444444
No 235
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=20.94 E-value=1.7e+02 Score=18.65 Aligned_cols=45 Identities=9% Similarity=0.171 Sum_probs=25.0
Q ss_pred hHHHHHHHHhhcchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12696 4 SYLEQYLDSLDSLPIELQRNFTLMRELDSRAQDVMKTIDRVAEDY 48 (267)
Q Consensus 4 ~yLedfld~ie~LP~El~r~l~~irelD~~~~~~~~~i~~~~~~~ 48 (267)
-|+-+||-....-+.|+--.-.++.+|-.++..+..+++....++
T Consensus 5 efIk~~LG~~~p~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 5 DFLKHHLGAATPENPEIELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp -----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356666654344567777777778888888888888777666554
No 236
>2fup_A Hypothetical protein PA3352; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.48A {Pseudomonas aeruginosa} SCOP: a.47.5.1
Probab=20.91 E-value=2.7e+02 Score=20.93 Aligned_cols=8 Identities=0% Similarity=-0.234 Sum_probs=2.6
Q ss_pred HHHHHHHH
Q psy12696 93 DKYIRKLD 100 (267)
Q Consensus 93 d~hirrLD 100 (267)
..++..++
T Consensus 117 ~~~l~~~~ 124 (157)
T 2fup_A 117 RANQASTG 124 (157)
T ss_dssp -CTTHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 237
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=20.81 E-value=85 Score=21.61 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=26.2
Q ss_pred HHHHHHHHhhcchHHHHHhHHHHHHHHHHHHHH
Q psy12696 5 YLEQYLDSLDSLPIELQRNFTLMRELDSRAQDV 37 (267)
Q Consensus 5 yLedfld~ie~LP~El~r~l~~irelD~~~~~~ 37 (267)
=.+++++.++.|=.|=..+|..+|+++.-++..
T Consensus 17 Ekdna~e~~e~lE~ERdFYf~KLRdiE~l~q~~ 49 (75)
T 3mtu_A 17 DKENALDRAEQAEADKDFYFGKLRNIELICQEN 49 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 456788888888888888888888888888764
No 238
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=20.48 E-value=1.1e+03 Score=27.79 Aligned_cols=36 Identities=14% Similarity=0.220 Sum_probs=21.2
Q ss_pred HHHHHHHhhcchHHHHHhHHHHHHHHHHHHHHHHHH
Q psy12696 6 LEQYLDSLDSLPIELQRNFTLMRELDSRAQDVMKTI 41 (267)
Q Consensus 6 Ledfld~ie~LP~El~r~l~~irelD~~~~~~~~~i 41 (267)
|.+--+.|+.|-.+|...-.++.+....+.+++.+|
T Consensus 1929 L~et~~~V~~l~~~L~~~~~~L~~k~~ea~~~l~~i 1964 (3245)
T 3vkg_A 1929 LRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQM 1964 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455566666666666566666666666555554
No 239
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=20.28 E-value=39 Score=21.70 Aligned_cols=13 Identities=31% Similarity=1.129 Sum_probs=10.3
Q ss_pred CCceeCcCCcCcc
Q psy12696 252 KGKWYCPKCTSDR 264 (267)
Q Consensus 252 ~~~w~C~~C~~~~ 264 (267)
.+.|.||.|....
T Consensus 34 P~dw~CP~Cg~~K 46 (52)
T 1e8j_A 34 PDDWACPVCGASK 46 (52)
T ss_dssp CTTCCCSSSCCCT
T ss_pred CCCCcCCCCCCcH
Confidence 5689999997653
No 240
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=20.27 E-value=62 Score=21.99 Aligned_cols=33 Identities=27% Similarity=0.665 Sum_probs=24.2
Q ss_pred CCCcee-ecCCCCCCCcccccCCCCCCcceecccCcc
Q psy12696 212 NEPTYC-VCQQVSYGEMIGCDNPDCPIEWFHFACVSL 247 (267)
Q Consensus 212 ~~~~~C-~C~~~~~~~mi~Cd~~~c~~~wfH~~Cv~l 247 (267)
..+++| .|+..-..+-+.|..|. +. .|..|...
T Consensus 33 ~~pt~C~~C~~~l~~qG~kC~~C~--~~-cHkkC~~~ 66 (72)
T 2fnf_X 33 GGPGWCDLCGREVLRQALRCANCK--FT-CHSECRSL 66 (72)
T ss_dssp SSCCBCTTTSSBCSSCCEECTTSS--CE-ECTGGGGG
T ss_pred CCCcchhhhhHHHHhCcCccCCCC--Ce-echhhhcc
Confidence 457788 88876666667899854 54 89999864
No 241
>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} SCOP: e.38.1.1 PDB: 1mi6_A 1ml5_Z*
Probab=20.25 E-value=4.8e+02 Score=23.49 Aligned_cols=22 Identities=23% Similarity=0.321 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy12696 88 TYEMVDKYIRKLDTDLARFEQE 109 (267)
Q Consensus 88 a~dlVd~hirrLD~dl~~~e~e 109 (267)
+.+++..-+..|...+..++..
T Consensus 95 ~~~~a~~e~~~l~~~l~~le~~ 116 (365)
T 1gqe_A 95 TFNEAVAELDALEEKLAQLEFR 116 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666666543
No 242
>1tt9_A Formimidoyltransferase-cyclodeaminase (formiminotransferase- cyclodeaminase) (FTCD)...; hepatitis autoantigen, intermediate channeling; 3.42A {Rattus norvegicus} PDB: 2pfd_A
Probab=20.22 E-value=5.6e+02 Score=24.33 Aligned_cols=77 Identities=8% Similarity=0.123 Sum_probs=43.4
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q psy12696 18 IELQRNFTLMRELDSRAQDVMKTIDRVAEDYLDNMK--HYSKDKKKETLAEIQKYFDKTKEYGDDKVQLAIQTYEMVDK 94 (267)
Q Consensus 18 ~El~r~l~~irelD~~~~~~~~~i~~~~~~~~k~~~--~~~~~~~~~~~~~I~~~~~~~~~lsdEKv~LA~~a~dlVd~ 94 (267)
.++++.+..+.++-.++.++.++=.+-...|++..+ +-+++++...-..|++.+..+...-=+=+.++..++++++.
T Consensus 389 ~~m~~i~~~~~~l~~~Ll~LiDeDaeAF~~vm~AykLPK~TeEEK~~R~~aiq~Alk~Aa~VPL~ia~~~~e~l~l~~~ 467 (541)
T 1tt9_A 389 STMRRLIPPFHAASAQLTSLVDADARAFAACLGAIKLPKNTPEERDRRTCALQEGLRQAVAVPLKLAETVSQLWPALQE 467 (541)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 455655555555555555554443333444444332 34566677777789999988886654444444444444443
No 243
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=20.16 E-value=34 Score=27.62 Aligned_cols=13 Identities=31% Similarity=0.956 Sum_probs=10.0
Q ss_pred CCCceeCcCCcCc
Q psy12696 251 PKGKWYCPKCTSD 263 (267)
Q Consensus 251 p~~~w~C~~C~~~ 263 (267)
..|.|.|+.|...
T Consensus 59 ~~g~~~CekC~~~ 71 (181)
T 1l1o_C 59 QNGLYRCEKCDTE 71 (181)
T ss_dssp TTTEEEETTTTEE
T ss_pred CCCeEECCCCCCc
Confidence 4678999999643
No 244
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.15 E-value=51 Score=21.20 Aligned_cols=13 Identities=38% Similarity=0.961 Sum_probs=8.2
Q ss_pred CCCceeCcCCcCc
Q psy12696 251 PKGKWYCPKCTSD 263 (267)
Q Consensus 251 p~~~w~C~~C~~~ 263 (267)
+.+.|.|+.|.-.
T Consensus 8 ~~~~W~C~~CT~~ 20 (53)
T 2d9g_A 8 DEGYWDCSVCTFR 20 (53)
T ss_dssp CCCCEECSSSCCE
T ss_pred CCCCcCCCCCccC
Confidence 3456777777543
Done!