Query psy12697
Match_columns 602
No_of_seqs 1077 out of 3720
Neff 11.6
Searched_HMMs 29240
Date Fri Aug 16 17:20:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12697.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12697hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 1.9E-59 6.5E-64 487.6 55.4 463 107-601 29-563 (611)
2 2ymu_A WD-40 repeat protein; u 100.0 6.4E-59 2.2E-63 483.3 58.5 459 106-601 26-576 (577)
3 2ymu_A WD-40 repeat protein; u 100.0 4E-56 1.4E-60 462.3 58.5 454 131-601 7-535 (577)
4 1nr0_A Actin interacting prote 100.0 3.7E-55 1.3E-59 455.3 49.9 438 106-601 69-607 (611)
5 1pgu_A Actin interacting prote 100.0 1.1E-53 3.7E-58 447.9 49.0 444 119-601 38-610 (615)
6 1vyh_C Platelet-activating fac 100.0 3.1E-52 1E-56 411.5 41.4 288 132-550 100-409 (410)
7 3sfz_A APAF-1, apoptotic pepti 100.0 1.8E-52 6E-57 473.1 43.1 479 118-601 635-1203(1249)
8 3sfz_A APAF-1, apoptotic pepti 100.0 1E-50 3.5E-55 458.7 43.0 453 117-601 720-1245(1249)
9 2oaj_A Protein SNI1; WD40 repe 100.0 3E-48 1E-52 417.1 45.0 450 136-601 13-657 (902)
10 1pgu_A Actin interacting prote 100.0 5.5E-47 1.9E-51 397.0 47.0 428 138-601 16-568 (615)
11 2oaj_A Protein SNI1; WD40 repe 100.0 1.6E-47 5.4E-52 411.6 42.0 471 108-601 29-779 (902)
12 3mkq_A Coatomer beta'-subunit; 100.0 2.7E-46 9.2E-51 404.7 47.3 399 131-600 4-500 (814)
13 1got_B GT-beta; complex (GTP-b 100.0 1.6E-45 5.3E-50 354.5 44.9 294 130-549 45-340 (340)
14 3iz6_a 40S ribosomal protein R 100.0 2.6E-46 8.7E-51 365.7 37.9 318 120-554 46-377 (380)
15 2pbi_B Guanine nucleotide-bind 100.0 5.7E-45 1.9E-49 352.1 45.2 296 131-549 55-354 (354)
16 2ynn_A Coatomer subunit beta'; 100.0 3.4E-45 1.2E-49 346.2 42.4 291 131-602 4-300 (304)
17 1r5m_A SIR4-interacting protei 100.0 8.9E-46 3E-50 369.3 40.4 348 219-601 42-421 (425)
18 3ow8_A WD repeat-containing pr 100.0 2.2E-45 7.4E-50 349.6 40.8 294 129-510 21-320 (321)
19 1vyh_C Platelet-activating fac 100.0 1.1E-44 3.7E-49 357.6 40.8 299 278-601 106-407 (410)
20 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.1E-44 3.9E-49 349.0 39.5 321 129-558 4-341 (345)
21 3ow8_A WD repeat-containing pr 100.0 3.1E-44 1E-48 341.6 40.6 279 278-601 30-317 (321)
22 4g56_B MGC81050 protein; prote 100.0 9E-45 3.1E-49 350.8 36.7 307 120-553 26-344 (357)
23 1r5m_A SIR4-interacting protei 100.0 3.5E-44 1.2E-48 357.8 39.3 349 120-551 25-424 (425)
24 1got_B GT-beta; complex (GTP-b 100.0 1.7E-43 5.7E-48 340.3 42.2 279 278-601 53-339 (340)
25 3frx_A Guanine nucleotide-bind 100.0 1.9E-43 6.4E-48 336.5 40.3 304 130-512 7-318 (319)
26 3mkq_A Coatomer beta'-subunit; 100.0 3.9E-43 1.3E-47 380.0 46.7 416 107-548 24-501 (814)
27 4gqb_B Methylosome protein 50; 100.0 2E-43 6.7E-48 338.3 38.5 238 280-553 82-332 (344)
28 4ery_A WD repeat-containing pr 100.0 2.5E-42 8.7E-47 328.6 43.5 295 130-551 13-311 (312)
29 1gxr_A ESG1, transducin-like e 100.0 2.8E-42 9.4E-47 332.6 42.4 323 139-550 8-335 (337)
30 2pm9_A Protein WEB1, protein t 100.0 3.3E-44 1.1E-48 356.8 29.5 330 140-553 12-415 (416)
31 3frx_A Guanine nucleotide-bind 100.0 1.7E-42 5.6E-47 330.0 39.2 289 216-552 11-317 (319)
32 2xzm_R RACK1; ribosome, transl 100.0 2.1E-42 7.1E-47 333.3 39.1 305 130-552 11-340 (343)
33 1erj_A Transcriptional repress 100.0 2.5E-42 8.6E-47 339.0 39.4 321 137-552 61-389 (393)
34 2pbi_B Guanine nucleotide-bind 100.0 1.4E-41 4.7E-46 328.4 41.8 279 278-601 62-353 (354)
35 2hes_X YDR267CP; beta-propelle 100.0 1.6E-41 5.3E-46 324.9 40.8 307 129-552 3-328 (330)
36 4g56_B MGC81050 protein; prote 100.0 2.8E-42 9.7E-47 333.3 35.6 307 229-601 12-339 (357)
37 2pm9_A Protein WEB1, protein t 100.0 3.5E-43 1.2E-47 349.5 29.1 334 221-601 11-410 (416)
38 4gqb_B Methylosome protein 50; 100.0 7.8E-42 2.7E-46 327.2 36.5 277 279-601 29-327 (344)
39 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.1E-41 3.9E-46 328.1 37.3 296 216-601 9-331 (345)
40 4aow_A Guanine nucleotide-bind 100.0 3.6E-41 1.2E-45 325.2 40.2 309 127-513 25-339 (340)
41 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.9E-41 3E-45 334.6 42.6 329 125-552 103-442 (445)
42 4ery_A WD repeat-containing pr 100.0 1.1E-40 3.8E-45 317.2 41.1 280 278-601 21-308 (312)
43 3vl1_A 26S proteasome regulato 100.0 3.1E-42 1.1E-46 343.0 31.5 347 141-600 57-414 (420)
44 3iz6_a 40S ribosomal protein R 100.0 7.4E-42 2.5E-46 334.1 33.3 283 278-601 64-371 (380)
45 3ei3_B DNA damage-binding prot 100.0 1.1E-41 3.7E-46 334.4 33.8 314 122-552 55-382 (383)
46 3gre_A Serine/threonine-protei 100.0 5.7E-42 1.9E-46 342.8 30.8 367 124-601 47-436 (437)
47 1gxr_A ESG1, transducin-like e 100.0 1.8E-40 6.2E-45 319.9 39.5 316 221-601 8-333 (337)
48 4aow_A Guanine nucleotide-bind 100.0 5.9E-40 2E-44 316.7 42.0 292 216-554 32-339 (340)
49 1erj_A Transcriptional repress 100.0 7.8E-40 2.7E-44 321.3 40.5 283 279-601 63-385 (393)
50 3odt_A Protein DOA1; ubiquitin 100.0 2.9E-39 9.8E-44 308.0 42.1 295 130-519 8-304 (313)
51 4e54_B DNA damage-binding prot 100.0 1.8E-41 6.2E-46 337.9 27.8 312 130-555 109-433 (435)
52 2j04_B YDR362CP, TAU91; beta p 100.0 2.1E-41 7.2E-46 340.1 27.8 339 139-552 132-517 (524)
53 3v7d_B Cell division control p 100.0 1.9E-39 6.4E-44 327.2 41.9 320 131-549 112-460 (464)
54 2j04_A TAU60, YPL007P, hypothe 100.0 1.3E-41 4.5E-46 331.0 25.0 316 137-594 12-350 (588)
55 2xzm_R RACK1; ribosome, transl 100.0 3.1E-39 1.1E-43 311.1 40.5 289 277-601 18-336 (343)
56 2hes_X YDR267CP; beta-propelle 100.0 1.7E-39 6E-44 310.7 38.4 277 278-601 12-324 (330)
57 2ynn_A Coatomer subunit beta'; 100.0 2.4E-39 8.3E-44 306.0 38.0 273 108-552 25-302 (304)
58 4a11_B DNA excision repair pro 100.0 4.7E-40 1.6E-44 326.0 34.0 343 119-560 22-373 (408)
59 3zwl_B Eukaryotic translation 100.0 4.6E-39 1.6E-43 314.3 39.9 296 131-518 23-353 (369)
60 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.5E-39 2.9E-43 320.2 42.6 316 215-597 111-430 (445)
61 1sq9_A Antiviral protein SKI8; 100.0 5.4E-39 1.9E-43 317.1 36.6 316 131-513 7-397 (397)
62 3dm0_A Maltose-binding peripla 100.0 1.2E-38 4.1E-43 337.0 41.4 289 216-551 376-692 (694)
63 3dm0_A Maltose-binding peripla 100.0 9.8E-39 3.3E-43 337.7 40.1 312 131-510 373-692 (694)
64 1sq9_A Antiviral protein SKI8; 100.0 8.3E-39 2.8E-43 315.8 35.9 305 216-553 10-396 (397)
65 3v7d_B Cell division control p 100.0 3.2E-38 1.1E-42 318.2 40.9 317 216-602 115-460 (464)
66 3vl1_A 26S proteasome regulato 100.0 1.3E-38 4.4E-43 316.9 37.2 323 118-552 76-419 (420)
67 3i2n_A WD repeat-containing pr 100.0 1.7E-38 5.9E-43 308.7 36.5 296 134-554 12-355 (357)
68 3zwl_B Eukaryotic translation 100.0 2.7E-38 9.4E-43 308.8 37.3 293 215-559 25-353 (369)
69 1k8k_C P40, ARP2/3 complex 41 100.0 8.2E-39 2.8E-43 312.9 32.8 323 136-514 4-364 (372)
70 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-39 4.3E-44 327.2 26.1 309 232-601 171-513 (524)
71 3k26_A Polycomb protein EED; W 100.0 7E-39 2.4E-43 312.6 30.6 292 136-511 14-366 (366)
72 3k26_A Polycomb protein EED; W 100.0 1.7E-38 5.9E-43 309.9 31.4 307 278-601 16-362 (366)
73 3ei3_B DNA damage-binding prot 100.0 7.2E-38 2.5E-42 307.2 36.0 284 216-601 67-378 (383)
74 3odt_A Protein DOA1; ubiquitin 100.0 1.1E-37 3.9E-42 296.9 35.9 285 215-558 11-302 (313)
75 3dwl_C Actin-related protein 2 100.0 8.3E-39 2.8E-43 313.3 26.1 319 136-509 7-377 (377)
76 4gga_A P55CDC, cell division c 100.0 5.3E-37 1.8E-41 304.4 37.1 291 142-562 107-405 (420)
77 4h5i_A Guanine nucleotide-exch 100.0 7.1E-38 2.4E-42 303.3 29.1 293 222-553 14-344 (365)
78 4aez_A CDC20, WD repeat-contai 100.0 9.3E-37 3.2E-41 300.8 35.9 296 134-519 85-388 (401)
79 4h5i_A Guanine nucleotide-exch 100.0 4.8E-37 1.6E-41 297.5 32.6 300 140-512 14-344 (365)
80 2pm7_B Protein transport prote 100.0 1.3E-36 4.3E-41 286.4 33.5 248 133-434 2-284 (297)
81 1k8k_C P40, ARP2/3 complex 41 100.0 2.1E-36 7.3E-41 295.7 35.8 306 279-601 7-357 (372)
82 4ggc_A P55CDC, cell division c 100.0 4.1E-36 1.4E-40 286.8 35.4 282 143-554 28-317 (318)
83 4aez_A CDC20, WD repeat-contai 100.0 1.9E-36 6.5E-41 298.5 33.8 288 218-559 87-387 (401)
84 4e54_B DNA damage-binding prot 100.0 1.3E-36 4.6E-41 302.8 32.7 280 279-601 118-426 (435)
85 3i2n_A WD repeat-containing pr 100.0 2.9E-36 9.9E-41 293.0 33.8 288 279-601 17-349 (357)
86 3mmy_A MRNA export factor; mRN 100.0 5.5E-36 1.9E-40 292.3 35.6 312 121-553 20-347 (368)
87 3dwl_C Actin-related protein 2 100.0 1.6E-37 5.5E-42 304.2 24.3 281 218-550 7-377 (377)
88 1p22_A F-BOX/WD-repeat protein 100.0 9.4E-36 3.2E-40 296.9 37.1 277 136-556 129-418 (435)
89 3dw8_B Serine/threonine-protei 100.0 3.5E-36 1.2E-40 302.0 33.7 339 138-510 26-445 (447)
90 3f3f_A Nucleoporin SEH1; struc 100.0 6.4E-36 2.2E-40 289.6 34.2 308 134-559 5-344 (351)
91 2pm7_B Protein transport prote 100.0 8.3E-36 2.8E-40 280.8 33.8 257 315-601 3-281 (297)
92 3bg1_A Protein SEC13 homolog; 100.0 1E-36 3.4E-41 289.7 27.6 248 135-434 8-292 (316)
93 1yfq_A Cell cycle arrest prote 100.0 3.1E-36 1.1E-40 290.9 29.8 271 278-597 9-315 (342)
94 1yfq_A Cell cycle arrest prote 100.0 6.2E-36 2.1E-40 288.8 31.6 289 219-550 8-322 (342)
95 3dw8_B Serine/threonine-protei 100.0 5.6E-36 1.9E-40 300.5 31.4 299 277-599 25-441 (447)
96 4gga_A P55CDC, cell division c 100.0 1.2E-34 4.1E-39 287.4 40.3 276 281-601 106-391 (420)
97 3gre_A Serine/threonine-protei 100.0 1.2E-35 4E-40 297.0 32.0 273 219-563 60-370 (437)
98 4a11_B DNA excision repair pro 100.0 1.5E-34 5.3E-39 286.3 36.3 293 278-601 41-361 (408)
99 3jrp_A Fusion protein of prote 100.0 2.6E-35 9E-40 288.7 30.0 253 130-436 1-288 (379)
100 1p22_A F-BOX/WD-repeat protein 100.0 1.8E-34 6.1E-39 287.7 35.7 264 280-601 133-410 (435)
101 4ggc_A P55CDC, cell division c 100.0 9.5E-34 3.2E-38 270.4 38.7 275 282-601 27-311 (318)
102 3bg1_A Protein SEC13 homolog; 100.0 2.9E-35 9.8E-40 279.6 27.6 258 316-601 8-289 (316)
103 2j04_A TAU60, YPL007P, hypothe 100.0 4.2E-36 1.4E-40 292.5 21.6 307 106-541 25-350 (588)
104 3vu4_A KMHSV2; beta-propeller 100.0 3.9E-33 1.3E-37 269.3 35.2 290 124-553 3-337 (355)
105 1k32_A Tricorn protease; prote 100.0 1.3E-32 4.6E-37 303.3 44.2 442 120-600 33-633 (1045)
106 3mmy_A MRNA export factor; mRN 100.0 2.7E-33 9.1E-38 273.3 34.4 273 278-597 37-338 (368)
107 3jro_A Fusion protein of prote 100.0 1.6E-34 5.6E-39 306.7 25.4 261 133-513 2-287 (753)
108 2aq5_A Coronin-1A; WD40 repeat 100.0 1.4E-33 4.9E-38 278.2 30.0 275 282-600 36-337 (402)
109 3jrp_A Fusion protein of prote 100.0 3.4E-33 1.1E-37 273.7 30.1 263 312-601 2-283 (379)
110 2aq5_A Coronin-1A; WD40 repeat 100.0 3.8E-33 1.3E-37 275.2 30.3 283 225-554 37-344 (402)
111 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.9E-32 1.3E-36 272.0 37.9 265 278-553 100-392 (450)
112 4gq1_A NUP37; propeller, trans 100.0 1.9E-33 6.3E-38 275.6 27.2 326 224-601 17-386 (393)
113 3f3f_A Nucleoporin SEH1; struc 100.0 1.7E-32 5.8E-37 265.5 32.4 266 315-601 5-333 (351)
114 1l0q_A Surface layer protein; 100.0 3.9E-31 1.3E-35 260.1 41.9 307 153-554 3-344 (391)
115 4gq1_A NUP37; propeller, trans 100.0 2E-33 7E-38 275.3 25.3 343 144-550 19-387 (393)
116 1l0q_A Surface layer protein; 100.0 6.6E-31 2.3E-35 258.5 41.5 333 118-538 10-364 (391)
117 3bws_A Protein LP49; two-domai 100.0 8.5E-31 2.9E-35 261.5 41.8 272 281-601 123-428 (433)
118 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-32 4.8E-37 264.7 27.3 273 147-549 43-330 (343)
119 2w18_A PALB2, fancn, partner a 100.0 6E-32 2.1E-36 246.9 29.6 276 118-550 61-355 (356)
120 3vu4_A KMHSV2; beta-propeller 100.0 8.3E-32 2.8E-36 260.0 32.5 295 278-600 17-331 (355)
121 2xyi_A Probable histone-bindin 100.0 7.1E-32 2.4E-36 268.1 32.7 253 315-601 122-406 (430)
122 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.4E-31 4.9E-36 267.8 34.1 269 281-593 5-373 (450)
123 3bws_A Protein LP49; two-domai 100.0 4.2E-31 1.4E-35 263.7 37.0 301 121-511 102-432 (433)
124 2xyi_A Probable histone-bindin 100.0 1.5E-31 5.1E-36 265.8 33.1 242 277-552 125-410 (430)
125 1k32_A Tricorn protease; prote 100.0 6.3E-31 2.2E-35 290.0 37.4 417 139-597 13-494 (1045)
126 3lrv_A PRE-mRNA-splicing facto 100.0 1E-31 3.4E-36 258.8 27.0 272 228-601 42-329 (343)
127 2w18_A PALB2, fancn, partner a 100.0 6.5E-31 2.2E-35 240.1 29.8 280 225-601 42-353 (356)
128 2xtc_A F-box-like/WD repeat-co 100.0 3.3E-35 1.1E-39 202.7 -1.6 87 1-87 1-89 (90)
129 3jro_A Fusion protein of prote 100.0 4.6E-31 1.6E-35 280.3 29.2 247 277-553 6-286 (753)
130 1nir_A Nitrite reductase; hemo 100.0 6.5E-29 2.2E-33 251.8 37.1 323 147-563 144-525 (543)
131 1nir_A Nitrite reductase; hemo 100.0 2.5E-28 8.5E-33 247.5 38.7 330 118-521 157-524 (543)
132 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.4E-28 8.1E-33 240.6 29.0 302 221-587 61-410 (415)
133 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.7E-28 1.6E-32 238.4 29.2 300 141-534 63-409 (415)
134 1xfd_A DIP, dipeptidyl aminope 100.0 4.3E-28 1.5E-32 258.4 29.6 348 142-594 18-429 (723)
135 2ecf_A Dipeptidyl peptidase IV 100.0 4.2E-27 1.4E-31 251.4 33.3 342 140-553 36-460 (741)
136 2ecf_A Dipeptidyl peptidase IV 100.0 3E-27 1E-31 252.5 32.0 328 222-595 36-445 (741)
137 2z3z_A Dipeptidyl aminopeptida 100.0 2.2E-25 7.4E-30 236.7 36.8 344 122-550 46-474 (706)
138 2z3z_A Dipeptidyl aminopeptida 99.9 6.4E-25 2.2E-29 233.1 30.9 329 143-554 28-437 (706)
139 1xfd_A DIP, dipeptidyl aminope 99.9 7.6E-25 2.6E-29 233.3 30.5 367 107-559 27-450 (723)
140 3vgz_A Uncharacterized protein 99.9 1.3E-23 4.6E-28 203.2 34.4 270 281-595 41-334 (353)
141 1ri6_A Putative isomerase YBHE 99.9 1.4E-23 4.8E-28 202.2 32.1 278 220-587 35-335 (343)
142 1pby_B Quinohemoprotein amine 99.9 1.2E-23 4.2E-28 202.0 30.5 280 153-523 2-322 (337)
143 3u4y_A Uncharacterized protein 99.9 7.1E-23 2.4E-27 196.1 35.6 283 146-513 3-306 (331)
144 2ojh_A Uncharacterized protein 99.9 2.9E-24 9.8E-29 202.3 25.0 254 115-426 17-293 (297)
145 1z68_A Fibroblast activation p 99.9 2.9E-24 1E-28 228.4 24.6 321 145-560 20-451 (719)
146 2ojh_A Uncharacterized protein 99.9 1.7E-23 5.9E-28 196.9 26.8 253 298-596 18-293 (297)
147 3vgz_A Uncharacterized protein 99.9 3.6E-22 1.2E-26 193.1 33.2 269 221-543 39-335 (353)
148 1pby_B Quinohemoprotein amine 99.9 4.8E-23 1.6E-27 197.9 26.4 271 235-562 2-320 (337)
149 1ri6_A Putative isomerase YBHE 99.9 1.6E-22 5.5E-27 194.8 29.6 265 118-437 13-312 (343)
150 3u4y_A Uncharacterized protein 99.9 8.1E-22 2.8E-26 188.7 32.6 276 288-600 5-299 (331)
151 3o4h_A Acylamino-acid-releasin 99.9 8.1E-23 2.8E-27 211.5 23.5 270 139-511 20-315 (582)
152 1jmx_B Amine dehydrogenase; ox 99.9 8.8E-22 3E-26 190.1 27.3 287 145-521 4-335 (349)
153 3o4h_A Acylamino-acid-releasin 99.9 1.7E-22 5.8E-27 209.1 23.5 258 281-597 22-304 (582)
154 4a5s_A Dipeptidyl peptidase 4 99.9 7.1E-22 2.4E-26 209.8 28.7 354 142-595 18-436 (740)
155 3scy_A Hypothetical bacterial 99.9 5.8E-20 2E-24 178.0 39.6 300 119-531 26-360 (361)
156 3pe7_A Oligogalacturonate lyas 99.9 2.1E-21 7E-26 190.4 28.6 307 122-550 12-380 (388)
157 1z68_A Fibroblast activation p 99.9 6.9E-22 2.4E-26 210.1 27.1 320 119-519 35-451 (719)
158 3hfq_A Uncharacterized protein 99.9 2E-20 6.9E-25 180.2 33.0 275 121-439 17-323 (347)
159 1jmx_B Amine dehydrogenase; ox 99.9 3.5E-20 1.2E-24 178.8 31.1 270 285-561 4-334 (349)
160 3hfq_A Uncharacterized protein 99.9 9.2E-20 3.2E-24 175.6 32.6 248 281-555 40-322 (347)
161 2oit_A Nucleoporin 214KDA; NH2 99.9 2.9E-21 1E-25 190.4 20.9 207 281-553 37-279 (434)
162 3scy_A Hypothetical bacterial 99.9 5.6E-19 1.9E-23 171.1 35.1 293 235-583 14-360 (361)
163 2oit_A Nucleoporin 214KDA; NH2 99.9 5E-20 1.7E-24 181.6 27.0 264 139-434 35-332 (434)
164 4a5s_A Dipeptidyl peptidase 4 99.9 8.9E-20 3E-24 193.7 28.4 351 119-560 35-457 (740)
165 2oiz_A Aromatic amine dehydrog 99.9 6.1E-19 2.1E-23 169.7 29.1 283 119-458 30-359 (361)
166 3c5m_A Oligogalacturonate lyas 99.9 2.9E-20 9.9E-25 182.8 20.2 311 123-550 13-380 (396)
167 3pe7_A Oligogalacturonate lyas 99.8 1.8E-19 6.2E-24 176.6 25.1 280 285-599 40-376 (388)
168 3azo_A Aminopeptidase; POP fam 99.8 1E-18 3.5E-23 183.9 31.0 329 134-550 17-409 (662)
169 2oiz_A Aromatic amine dehydrog 99.8 7.2E-18 2.4E-22 162.2 33.1 292 151-534 14-359 (361)
170 1jof_A Carboxy-CIS,CIS-muconat 99.8 4.5E-18 1.5E-22 164.7 30.9 266 295-600 5-336 (365)
171 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.7E-18 5.9E-23 167.6 26.9 248 281-553 40-342 (365)
172 3azo_A Aminopeptidase; POP fam 99.8 1.8E-18 6E-23 182.1 26.0 296 216-556 17-373 (662)
173 1qks_A Cytochrome CD1 nitrite 99.8 1.4E-15 4.8E-20 153.4 41.0 329 119-520 176-547 (567)
174 1q7f_A NHL, brain tumor CG1071 99.8 4.3E-16 1.5E-20 145.3 34.9 239 280-554 29-282 (286)
175 3c5m_A Oligogalacturonate lyas 99.8 8.8E-18 3E-22 165.0 23.2 278 282-597 37-374 (396)
176 3fvz_A Peptidyl-glycine alpha- 99.8 8.8E-17 3E-21 153.0 29.2 244 280-552 23-322 (329)
177 2dg1_A DRP35, lactonase; beta 99.8 8.3E-17 2.8E-21 153.9 28.3 271 281-595 6-300 (333)
178 3fvz_A Peptidyl-glycine alpha- 99.8 4.1E-16 1.4E-20 148.3 32.4 250 140-435 23-322 (329)
179 1q7f_A NHL, brain tumor CG1071 99.8 2.4E-16 8.1E-21 147.1 29.5 245 138-436 27-281 (286)
180 1qks_A Cytochrome CD1 nitrite 99.8 6.4E-15 2.2E-19 148.6 38.9 319 150-561 165-547 (567)
181 2gop_A Trilobed protease; beta 99.8 4.3E-16 1.5E-20 149.9 29.1 256 223-551 15-330 (347)
182 3e5z_A Putative gluconolactona 99.8 5.9E-16 2E-20 145.1 28.5 249 130-437 17-288 (296)
183 2gop_A Trilobed protease; beta 99.7 1.3E-15 4.4E-20 146.5 28.2 250 281-597 15-322 (347)
184 3e5z_A Putative gluconolactona 99.7 2.9E-15 1E-19 140.4 29.2 235 315-601 21-283 (296)
185 2bkl_A Prolyl endopeptidase; m 99.7 9.3E-16 3.2E-20 161.6 27.1 243 220-514 118-400 (695)
186 2dg1_A DRP35, lactonase; beta 99.7 1.7E-14 5.9E-19 137.7 32.3 250 119-426 26-301 (333)
187 2xdw_A Prolyl endopeptidase; a 99.7 2.6E-15 8.9E-20 158.7 27.7 246 138-437 122-416 (710)
188 2z2n_A Virginiamycin B lyase; 99.7 2.9E-13 9.9E-18 127.0 38.4 271 281-601 15-292 (299)
189 2xdw_A Prolyl endopeptidase; a 99.7 8.3E-15 2.9E-19 154.9 30.5 241 221-513 123-416 (710)
190 2z2n_A Virginiamycin B lyase; 99.7 2.6E-13 8.9E-18 127.3 37.7 284 136-513 10-297 (299)
191 3dsm_A Uncharacterized protein 99.7 3E-14 1E-18 135.1 31.3 269 242-560 15-309 (328)
192 2bkl_A Prolyl endopeptidase; m 99.7 9.7E-16 3.3E-20 161.5 22.3 247 138-438 118-400 (695)
193 3dsm_A Uncharacterized protein 99.7 1.2E-14 4.2E-19 137.9 26.1 268 118-444 15-310 (328)
194 3no2_A Uncharacterized protein 99.7 2.1E-14 7.3E-19 131.8 26.7 235 150-444 3-261 (276)
195 3sjl_D Methylamine dehydrogena 99.7 6.8E-14 2.3E-18 131.9 29.2 297 147-533 39-384 (386)
196 1rwi_B Serine/threonine-protei 99.7 5.7E-14 2E-18 129.6 27.8 233 323-600 25-259 (270)
197 2mad_H Methylamine dehydrogena 99.7 5.5E-13 1.9E-17 128.0 35.2 278 121-518 48-357 (373)
198 3no2_A Uncharacterized protein 99.7 1E-13 3.6E-18 127.2 28.7 223 332-592 4-230 (276)
199 1rwi_B Serine/threonine-protei 99.7 5.6E-14 1.9E-18 129.7 26.9 237 282-553 25-265 (270)
200 2mad_H Methylamine dehydrogena 99.7 4.7E-13 1.6E-17 128.5 33.7 283 230-559 28-357 (373)
201 1yr2_A Prolyl oligopeptidase; 99.6 6.8E-14 2.3E-18 148.5 26.4 242 221-514 161-444 (741)
202 2qc5_A Streptogramin B lactona 99.6 5.5E-12 1.9E-16 118.2 36.0 271 281-601 20-297 (300)
203 1yr2_A Prolyl oligopeptidase; 99.6 1.1E-13 3.8E-18 146.9 25.1 245 138-437 160-443 (741)
204 3sjl_D Methylamine dehydrogena 99.6 6E-13 2E-17 125.5 26.7 298 228-585 38-384 (386)
205 2qc5_A Streptogramin B lactona 99.6 1.6E-11 5.5E-16 115.0 36.7 277 220-550 17-298 (300)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.4E-12 4.8E-17 123.2 29.5 230 321-598 17-292 (314)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.3E-12 4.5E-17 123.5 27.8 249 137-435 14-299 (314)
208 3hxj_A Pyrrolo-quinoline quino 99.6 3.2E-13 1.1E-17 128.7 21.8 300 145-551 24-323 (330)
209 3hxj_A Pyrrolo-quinoline quino 99.5 6.3E-13 2.2E-17 126.6 22.6 290 235-601 31-320 (330)
210 3hrp_A Uncharacterized protein 99.5 1.2E-11 4E-16 120.6 28.3 247 281-550 131-408 (409)
211 3q7m_A Lipoprotein YFGL, BAMB; 99.5 3.6E-11 1.2E-15 116.7 31.6 307 151-549 52-375 (376)
212 3c75_H MADH, methylamine dehyd 99.5 2.1E-12 7.1E-17 124.3 22.1 282 232-559 82-409 (426)
213 4a2l_A BT_4663, two-component 99.5 2.7E-09 9.2E-14 114.2 48.4 412 121-601 151-611 (795)
214 3g4e_A Regucalcin; six bladed 99.5 3.3E-11 1.1E-15 112.5 29.1 226 321-594 12-261 (297)
215 3c75_H MADH, methylamine dehyd 99.5 2.3E-11 8E-16 117.0 27.6 279 150-518 82-409 (426)
216 3g4e_A Regucalcin; six bladed 99.5 3.5E-11 1.2E-15 112.3 27.8 227 282-540 14-260 (297)
217 3dr2_A Exported gluconolactona 99.5 1.9E-11 6.5E-16 114.7 26.0 240 131-429 35-301 (305)
218 3hrp_A Uncharacterized protein 99.5 7.1E-11 2.4E-15 115.1 30.3 236 141-433 131-408 (409)
219 4a2l_A BT_4663, two-component 99.5 2.3E-08 7.9E-13 107.0 52.3 418 121-601 194-656 (795)
220 2ghs_A AGR_C_1268P; regucalcin 99.5 1.1E-10 3.6E-15 110.5 30.4 220 324-595 51-292 (326)
221 3dr2_A Exported gluconolactona 99.5 6.2E-11 2.1E-15 111.2 27.7 236 314-602 37-304 (305)
222 1xip_A Nucleoporin NUP159; bet 99.5 6.4E-12 2.2E-16 119.1 20.8 166 281-458 38-225 (388)
223 2ghs_A AGR_C_1268P; regucalcin 99.4 1.9E-10 6.6E-15 108.7 29.4 222 283-540 51-290 (326)
224 2qe8_A Uncharacterized protein 99.4 3.4E-11 1.2E-15 114.9 24.1 257 281-596 17-312 (343)
225 1xip_A Nucleoporin NUP159; bet 99.4 6.1E-12 2.1E-16 119.3 17.9 179 365-592 39-231 (388)
226 3q7m_A Lipoprotein YFGL, BAMB; 99.4 1.7E-10 5.9E-15 111.8 28.3 304 234-600 53-373 (376)
227 3iuj_A Prolyl endopeptidase; h 99.4 3.5E-11 1.2E-15 126.4 25.0 242 138-437 126-407 (693)
228 1yiq_A Quinohemoprotein alcoho 99.4 9.6E-11 3.3E-15 122.0 26.5 308 152-540 70-537 (689)
229 1yiq_A Quinohemoprotein alcoho 99.4 1.1E-10 3.6E-15 121.7 26.0 331 234-589 70-532 (689)
230 2hz6_A Endoplasmic reticulum t 99.4 2.2E-14 7.6E-19 138.1 -1.6 221 291-554 8-238 (369)
231 1mda_H Methylamine dehydrogena 99.4 6.7E-11 2.3E-15 112.0 22.2 273 121-532 47-366 (368)
232 3iuj_A Prolyl endopeptidase; h 99.4 8.4E-11 2.9E-15 123.5 25.2 241 220-514 126-408 (693)
233 1mda_H Methylamine dehydrogena 99.4 6.4E-11 2.2E-15 112.1 20.6 264 245-561 47-355 (368)
234 3v9f_A Two-component system se 99.3 9.6E-08 3.3E-12 102.0 46.6 432 121-601 138-608 (781)
235 1kb0_A Quinohemoprotein alcoho 99.3 9.1E-11 3.1E-15 121.9 22.3 313 234-562 77-517 (677)
236 2hz6_A Endoplasmic reticulum t 99.3 5.2E-12 1.8E-16 121.5 9.6 186 332-560 8-200 (369)
237 2qe8_A Uncharacterized protein 99.3 2.6E-10 8.8E-15 108.8 20.7 284 141-549 17-318 (343)
238 3v9f_A Two-component system se 99.3 5.2E-07 1.8E-11 96.3 47.7 404 141-601 66-521 (781)
239 1kb0_A Quinohemoprotein alcoho 99.2 7.9E-10 2.7E-14 114.9 23.1 270 292-600 77-502 (677)
240 2ece_A 462AA long hypothetical 99.2 5.5E-09 1.9E-13 99.1 24.5 231 331-593 93-399 (462)
241 2iwa_A Glutamine cyclotransfer 99.1 2.6E-08 8.8E-13 88.8 22.1 199 323-553 22-238 (266)
242 1kv9_A Type II quinohemoprotei 99.1 6.1E-08 2.1E-12 100.7 27.8 307 152-540 66-520 (668)
243 2ece_A 462AA long hypothetical 99.1 1.9E-07 6.5E-12 88.7 27.7 239 287-540 88-399 (462)
244 1npe_A Nidogen, entactin; glyc 99.0 8.5E-07 2.9E-11 81.0 31.0 218 281-534 36-262 (267)
245 1fwx_A Nitrous oxide reductase 99.0 4.7E-09 1.6E-13 103.3 15.6 330 155-554 18-433 (595)
246 1npe_A Nidogen, entactin; glyc 99.0 4.9E-07 1.7E-11 82.6 28.1 247 294-587 3-263 (267)
247 1flg_A Protein (quinoprotein e 99.0 6.3E-07 2.1E-11 91.1 30.6 267 292-561 117-525 (582)
248 1w6s_A Methanol dehydrogenase 99.0 3.7E-07 1.3E-11 92.5 28.6 316 234-561 62-512 (599)
249 3nol_A Glutamine cyclotransfer 99.0 1.2E-07 4.2E-12 83.2 20.9 184 324-541 45-244 (262)
250 1kv9_A Type II quinohemoprotei 99.0 1E-07 3.5E-12 99.0 24.1 199 292-517 66-339 (668)
251 2ad6_A Methanol dehydrogenase 99.0 1.5E-06 5E-11 88.3 31.6 264 292-561 115-503 (571)
252 1fwx_A Nitrous oxide reductase 98.9 1.1E-07 3.7E-12 93.7 22.0 247 331-594 99-407 (595)
253 2iwa_A Glutamine cyclotransfer 98.9 6.7E-07 2.3E-11 79.7 25.1 206 355-599 11-231 (266)
254 3nok_A Glutaminyl cyclase; bet 98.9 1.9E-07 6.4E-12 82.0 20.7 189 366-594 57-254 (268)
255 3nol_A Glutamine cyclotransfer 98.9 2.3E-07 7.8E-12 81.5 21.2 189 366-594 45-244 (262)
256 3s94_A LRP-6, low-density lipo 98.9 7.1E-05 2.4E-09 76.5 42.4 413 119-594 17-498 (619)
257 2ad6_A Methanol dehydrogenase 98.9 4E-07 1.4E-11 92.5 25.6 302 152-534 62-518 (571)
258 3nok_A Glutaminyl cyclase; bet 98.9 3.2E-07 1.1E-11 80.5 20.9 183 323-540 56-253 (268)
259 2fp8_A Strictosidine synthase; 98.9 1.2E-06 4E-11 82.5 26.7 233 282-551 20-312 (322)
260 1flg_A Protein (quinoprotein e 98.9 1.6E-06 5.3E-11 88.2 28.5 156 343-534 291-540 (582)
261 3mbr_X Glutamine cyclotransfer 98.8 9.9E-07 3.4E-11 76.9 21.9 190 366-594 23-223 (243)
262 2p4o_A Hypothetical protein; p 98.8 1.4E-05 5E-10 74.3 30.6 225 281-542 32-278 (306)
263 3mbr_X Glutamine cyclotransfer 98.8 2.4E-06 8.2E-11 74.4 22.9 186 322-541 21-223 (243)
264 2fp8_A Strictosidine synthase; 98.8 2.3E-06 7.8E-11 80.6 25.1 259 141-435 19-313 (322)
265 1w6s_A Methanol dehydrogenase 98.8 1.9E-06 6.6E-11 87.3 24.5 202 293-519 63-350 (599)
266 1k3i_A Galactose oxidase precu 98.7 3.9E-06 1.3E-10 87.3 25.5 271 227-541 190-530 (656)
267 3v64_C Agrin; beta propeller, 98.7 9.6E-05 3.3E-09 70.0 31.6 242 283-560 36-283 (349)
268 4a0p_A LRP6, LRP-6, low-densit 98.6 0.00081 2.8E-08 68.9 48.6 418 119-594 14-496 (628)
269 2p4o_A Hypothetical protein; p 98.6 6.5E-05 2.2E-09 69.9 28.5 233 322-595 32-278 (306)
270 2xbg_A YCF48-like protein; pho 98.6 0.0004 1.4E-08 65.1 35.1 267 281-599 36-316 (327)
271 3v65_B Low-density lipoprotein 98.6 0.00014 4.7E-09 70.0 30.6 241 284-560 80-326 (386)
272 1k3i_A Galactose oxidase precu 98.6 3.8E-06 1.3E-10 87.4 21.0 239 145-436 190-498 (656)
273 2xe4_A Oligopeptidase B; hydro 98.6 4.5E-05 1.5E-09 80.6 28.7 191 224-433 175-398 (751)
274 3qqz_A Putative uncharacterize 98.5 9.4E-05 3.2E-09 65.5 25.1 208 316-549 21-250 (255)
275 1ijq_A LDL receptor, low-densi 98.5 0.00048 1.6E-08 64.2 31.5 223 302-559 10-245 (316)
276 2xe4_A Oligopeptidase B; hydro 98.5 1.6E-05 5.4E-10 84.0 23.1 240 142-437 175-460 (751)
277 3s94_A LRP-6, low-density lipo 98.5 0.002 6.7E-08 65.9 38.7 330 223-592 84-452 (619)
278 2xbg_A YCF48-like protein; pho 98.5 0.0011 3.7E-08 62.2 35.1 277 222-549 35-319 (327)
279 3tc9_A Hypothetical hydrolase; 98.4 0.00012 4E-09 71.5 26.3 151 282-434 138-300 (430)
280 3p5b_L Low density lipoprotein 98.4 0.0008 2.7E-08 64.9 31.4 232 294-560 85-328 (400)
281 3sov_A LRP-6, low-density lipo 98.4 0.00046 1.6E-08 64.1 28.6 226 301-560 12-246 (318)
282 3qqz_A Putative uncharacterize 98.4 0.00097 3.3E-08 59.0 28.7 209 135-391 21-251 (255)
283 3v64_C Agrin; beta propeller, 98.4 0.00079 2.7E-08 63.6 29.0 206 222-444 72-284 (349)
284 3v65_B Low-density lipoprotein 98.3 0.00047 1.6E-08 66.3 27.2 215 222-453 115-336 (386)
285 4hw6_A Hypothetical protein, I 98.3 0.00089 3E-08 65.3 29.3 246 282-550 140-431 (433)
286 3p5b_L Low density lipoprotein 98.3 0.0024 8.3E-08 61.5 31.9 244 235-529 84-338 (400)
287 1ijq_A LDL receptor, low-densi 98.3 0.0022 7.6E-08 59.7 31.6 206 281-519 30-246 (316)
288 3ei3_A DNA damage-binding prot 98.3 0.0081 2.8E-07 65.9 43.6 186 222-425 553-757 (1158)
289 4hw6_A Hypothetical protein, I 98.3 0.00072 2.5E-08 65.9 27.3 242 323-600 140-428 (433)
290 3tc9_A Hypothetical hydrolase; 98.3 0.00044 1.5E-08 67.4 25.6 154 142-351 138-300 (430)
291 3sov_A LRP-6, low-density lipo 98.3 0.0013 4.5E-08 61.1 27.6 204 282-520 36-247 (318)
292 3ei3_A DNA damage-binding prot 98.2 0.012 4E-07 64.7 42.7 382 120-600 532-994 (1158)
293 3m0c_C LDL receptor, low-densi 98.1 0.0037 1.3E-07 65.5 30.7 226 300-559 402-639 (791)
294 3amr_A 3-phytase; beta-propell 98.0 0.0021 7E-08 59.2 23.0 191 332-560 39-272 (355)
295 1n7d_A LDL receptor, low-densi 98.0 7E-05 2.4E-09 78.0 14.9 227 300-560 384-622 (699)
296 4a0p_A LRP6, LRP-6, low-densit 98.0 0.02 6.8E-07 58.6 44.9 310 223-551 37-419 (628)
297 3amr_A 3-phytase; beta-propell 98.0 0.0048 1.6E-07 56.8 24.7 193 291-519 39-272 (355)
298 2ism_A Putative oxidoreductase 98.0 0.012 4.1E-07 55.5 28.2 234 141-423 31-333 (352)
299 2xzh_A Clathrin heavy chain 1; 97.9 0.01 3.5E-07 53.5 29.0 260 120-437 49-334 (365)
300 3kya_A Putative phosphatase; s 97.9 0.012 4.1E-07 57.5 27.9 253 282-556 140-479 (496)
301 3das_A Putative oxidoreductase 97.9 0.016 5.5E-07 53.9 30.4 249 134-423 25-326 (347)
302 2ism_A Putative oxidoreductase 97.9 0.0098 3.4E-07 56.1 25.6 243 281-538 31-331 (352)
303 3kya_A Putative phosphatase; s 97.9 0.026 8.8E-07 55.2 29.6 247 143-440 141-480 (496)
304 2p9w_A MAL S 1 allergenic prot 97.8 0.002 6.8E-08 58.7 19.3 166 363-552 12-215 (334)
305 3m0c_C LDL receptor, low-densi 97.8 0.0097 3.3E-07 62.4 27.1 156 281-436 424-590 (791)
306 3ott_A Two-component system se 97.8 0.053 1.8E-06 57.4 47.0 389 140-601 62-499 (758)
307 3ott_A Two-component system se 97.8 0.06 2E-06 57.0 48.9 401 122-554 84-547 (758)
308 2xzh_A Clathrin heavy chain 1; 97.7 0.023 7.9E-07 51.3 31.0 248 302-555 49-335 (365)
309 2p9w_A MAL S 1 allergenic prot 97.7 0.02 7E-07 52.2 24.0 162 322-512 13-216 (334)
310 1n7d_A LDL receptor, low-densi 97.7 0.001 3.5E-08 69.2 17.4 211 222-445 405-624 (699)
311 1bpo_A Protein (clathrin); cla 97.7 0.035 1.2E-06 52.3 31.0 248 302-555 48-334 (494)
312 1bpo_A Protein (clathrin); cla 97.7 0.04 1.4E-06 51.9 30.0 260 120-437 48-333 (494)
313 2g8s_A Glucose/sorbosone dehyd 97.6 0.041 1.4E-06 51.8 26.1 51 377-427 292-346 (353)
314 3a9g_A Putative uncharacterize 97.6 0.048 1.7E-06 51.3 29.0 238 140-423 28-330 (354)
315 3sre_A PON1, serum paraoxonase 97.4 0.032 1.1E-06 52.1 21.8 103 481-595 165-287 (355)
316 3a9g_A Putative uncharacterize 97.4 0.083 2.8E-06 49.7 27.9 239 281-539 29-329 (354)
317 3pbp_A Nucleoporin NUP82; beta 97.4 0.0081 2.8E-07 56.5 17.1 147 383-547 40-207 (452)
318 2g8s_A Glucose/sorbosone dehyd 97.4 0.097 3.3E-06 49.3 27.5 248 281-536 18-336 (353)
319 2vpj_A Kelch-like protein 12; 97.3 0.035 1.2E-06 51.0 20.7 226 291-553 14-279 (301)
320 3pbp_A Nucleoporin NUP82; beta 97.1 0.05 1.7E-06 51.2 18.8 114 482-599 67-206 (452)
321 1cru_A Protein (soluble quinop 97.1 0.24 8.2E-06 48.3 31.3 34 140-173 26-59 (454)
322 2be1_A Serine/threonine-protei 97.0 0.021 7.2E-07 52.8 14.9 111 334-444 11-139 (339)
323 3sre_A PON1, serum paraoxonase 96.9 0.26 8.9E-06 46.0 25.3 189 324-550 52-296 (355)
324 1tl2_A L10, protein (tachylect 96.9 0.084 2.9E-06 44.7 16.5 141 281-428 41-203 (236)
325 2vpj_A Kelch-like protein 12; 96.9 0.067 2.3E-06 49.1 18.0 143 291-437 112-280 (301)
326 2xn4_A Kelch-like protein 2; s 96.8 0.11 3.9E-06 47.5 19.4 224 292-553 16-277 (302)
327 1uuj_A Platelet-activating fac 96.8 4.3E-05 1.5E-09 52.8 -3.1 60 6-65 11-75 (88)
328 3das_A Putative oxidoreductase 96.8 0.32 1.1E-05 45.1 28.2 106 321-426 31-161 (347)
329 3ii7_A Kelch-like protein 7; p 96.8 0.2 6.7E-06 46.0 20.3 140 293-436 13-179 (306)
330 1cru_A Protein (soluble quinop 96.8 0.46 1.6E-05 46.3 30.2 104 322-425 27-164 (454)
331 1xi4_A Clathrin heavy chain; a 96.7 0.12 4.1E-06 56.6 20.2 259 120-436 48-332 (1630)
332 1xi4_A Clathrin heavy chain; a 96.7 0.17 5.7E-06 55.5 20.6 266 243-554 47-333 (1630)
333 1zgk_A Kelch-like ECH-associat 96.7 0.26 9E-06 45.3 20.3 144 290-436 23-194 (308)
334 4asc_A Kelch repeat and BTB do 96.6 0.42 1.4E-05 44.1 21.5 138 295-436 8-175 (315)
335 2be1_A Serine/threonine-protei 96.6 0.15 5.2E-06 47.0 17.9 143 293-436 11-184 (339)
336 3ii7_A Kelch-like protein 7; p 96.6 0.2 6.7E-06 46.1 18.9 142 291-436 55-226 (306)
337 1tl2_A L10, protein (tachylect 96.4 0.26 9.1E-06 41.8 16.2 148 364-545 41-203 (236)
338 2woz_A Kelch repeat and BTB do 96.3 0.59 2E-05 43.1 20.7 140 294-436 18-185 (318)
339 2xn4_A Kelch-like protein 2; s 96.3 0.33 1.1E-05 44.4 18.4 92 343-436 30-134 (302)
340 4asc_A Kelch repeat and BTB do 96.1 0.68 2.3E-05 42.6 19.6 143 291-436 98-278 (315)
341 1zgk_A Kelch-like ECH-associat 96.0 0.3 1E-05 44.9 16.8 61 491-553 168-241 (308)
342 2uvk_A YJHT; unknown function, 95.6 0.91 3.1E-05 42.6 18.7 91 291-383 19-128 (357)
343 2woz_A Kelch repeat and BTB do 95.2 1.9 6.4E-05 39.6 19.7 143 291-436 109-288 (318)
344 3s25_A Hypothetical 7-bladed b 95.0 2.1 7.1E-05 38.9 24.0 209 289-553 22-256 (302)
345 3s25_A Hypothetical 7-bladed b 94.4 2.8 9.6E-05 38.1 26.3 139 286-435 58-216 (302)
346 2uvk_A YJHT; unknown function, 94.4 1.1 3.9E-05 41.9 15.5 92 332-425 19-128 (357)
347 3qhy_B Beta-lactamase inhibito 93.6 3.8 0.00013 36.8 22.1 106 322-435 24-129 (282)
348 3qhy_B Beta-lactamase inhibito 93.6 4 0.00014 36.7 23.5 223 281-554 24-248 (282)
349 2zwa_A Leucine carboxyl methyl 93.5 4.8 0.00017 41.7 19.3 107 290-396 499-638 (695)
350 4hvt_A Ritya.17583.B, post-pro 93.5 5.6 0.00019 41.2 19.3 94 341-434 318-429 (711)
351 2zwa_A Leucine carboxyl methyl 93.4 4.2 0.00014 42.2 18.5 106 331-437 396-524 (695)
352 2wg3_C Hedgehog-interacting pr 92.7 7.8 0.00027 37.7 28.9 30 141-170 14-44 (463)
353 3sbq_A Nitrous-oxide reductase 90.2 1.7 5.8E-05 42.6 10.1 109 483-594 325-454 (638)
354 3sbq_A Nitrous-oxide reductase 88.7 20 0.00067 35.4 20.8 71 364-435 323-408 (638)
355 1suu_A DNA gyrase subunit A; t 87.5 17 0.00056 33.1 22.8 192 331-552 6-231 (312)
356 2wg3_C Hedgehog-interacting pr 87.3 22 0.00077 34.4 26.8 105 322-426 14-160 (463)
357 3b7f_A Glycosyl hydrolase, BNR 84.9 26 0.0009 33.0 28.4 135 293-430 23-203 (394)
358 4gq2_M Nucleoporin NUP120; bet 84.0 24 0.00083 38.0 15.9 40 480-519 235-274 (950)
359 3q6k_A 43.2 kDa salivary prote 82.5 32 0.0011 32.2 20.1 189 119-339 122-341 (381)
360 4gq2_M Nucleoporin NUP120; bet 81.6 9.3 0.00032 41.2 11.6 38 142-179 237-274 (950)
361 3no0_A DNA gyrase subunit A; D 80.5 31 0.0011 30.6 18.7 187 120-351 48-245 (276)
362 3uc1_A DNA gyrase subunit A; D 79.3 38 0.0013 31.0 23.6 273 293-596 4-321 (327)
363 4hvt_A Ritya.17583.B, post-pro 79.3 62 0.0021 33.4 23.7 187 329-553 137-382 (711)
364 3f7f_A Nucleoporin NUP120; nuc 78.6 16 0.00054 37.3 11.2 37 142-180 223-259 (729)
365 3kci_A Probable E3 ubiquitin-p 76.1 52 0.0018 30.9 29.5 194 234-434 10-240 (389)
366 2d68_A FOP, FGFR1OP; alpha hel 76.0 0.39 1.3E-05 33.0 -0.7 29 8-36 21-49 (82)
367 3uc1_A DNA gyrase subunit A; D 72.8 57 0.0019 29.8 21.6 189 334-552 4-228 (327)
368 1suu_A DNA gyrase subunit A; t 70.4 62 0.0021 29.3 25.8 194 290-511 6-231 (312)
369 3q6k_A 43.2 kDa salivary prote 69.5 74 0.0025 29.7 20.4 184 384-593 123-342 (381)
370 4a9v_A PHOX; hydrolase, beta-p 66.4 24 0.00083 34.9 9.0 19 575-593 531-549 (592)
371 4fhn_B Nucleoporin NUP120; pro 65.1 19 0.00067 39.8 9.2 39 481-519 238-276 (1139)
372 1wp5_A Topoisomerase IV; broke 63.7 87 0.003 28.5 24.8 235 290-552 3-277 (323)
373 3zwu_A Alkaline phosphatase PH 63.3 21 0.00072 35.8 8.1 19 574-592 530-548 (592)
374 3b7f_A Glycosyl hydrolase, BNR 62.5 1E+02 0.0035 28.8 28.8 145 280-426 54-254 (394)
375 1zi0_A DNA gyrase subunit A; b 61.4 93 0.0032 28.0 26.6 233 291-551 2-276 (307)
376 4fhn_B Nucleoporin NUP120; pro 59.9 7.1 0.00024 43.2 4.6 39 142-180 239-277 (1139)
377 3l6v_A GYRA, DNA gyrase subuni 55.0 1.3E+02 0.0046 27.9 26.9 145 288-434 3-179 (370)
378 3zwu_A Alkaline phosphatase PH 50.8 52 0.0018 33.0 8.6 58 482-539 477-548 (592)
379 3f7f_A Nucleoporin NUP120; nuc 48.0 25 0.00086 35.9 5.8 37 482-520 223-259 (729)
380 3no0_A DNA gyrase subunit A; D 47.6 1.5E+02 0.005 26.2 21.3 153 281-435 24-196 (276)
381 3l6v_A GYRA, DNA gyrase subuni 47.1 1.8E+02 0.0061 27.0 24.4 121 222-351 45-179 (370)
382 4a9v_A PHOX; hydrolase, beta-p 45.2 87 0.003 31.1 8.9 58 366-423 478-549 (592)
383 1wp5_A Topoisomerase IV; broke 44.1 1.8E+02 0.0063 26.3 24.6 189 232-434 3-224 (323)
384 1zi0_A DNA gyrase subunit A; b 40.3 2.1E+02 0.007 25.7 26.0 154 280-434 94-276 (307)
385 2l1n_A Uncharacterized protein 38.1 7.4 0.00025 28.3 0.2 19 3-24 18-36 (120)
386 4gz8_A Semaphorin-3A; multi-do 35.3 1.4E+02 0.0049 30.3 9.0 31 572-602 467-497 (667)
387 1q47_A Semaphorin 3A; beta pro 31.5 1.3E+02 0.0044 29.4 7.8 29 574-602 461-489 (495)
388 1zvt_A Topoisomerase IV subuni 29.6 2.8E+02 0.0095 24.0 15.5 109 482-595 85-208 (256)
389 3mez_B Mannose-specific lectin 29.3 1.7E+02 0.0057 21.4 10.4 15 418-432 91-105 (113)
390 3eyi_A Z-DNA-binding protein 1 26.2 12 0.0004 24.4 -0.3 26 9-35 12-37 (72)
391 3mhs_B Protein SUS1; multi-pro 25.6 23 0.00079 25.3 1.0 22 1-22 1-22 (96)
392 3al9_A Plexin-A2; beta-propell 24.2 1.1E+02 0.0039 30.2 6.0 71 524-602 401-478 (539)
393 2zux_A YESW protein; beta-prop 24.2 5.3E+02 0.018 25.5 26.0 147 403-552 362-532 (591)
394 1xkm_A Distinctin chain A; por 23.6 66 0.0023 15.4 2.0 15 42-56 3-19 (26)
395 3iey_B NEQ261; protein heterod 22.1 28 0.00095 27.5 1.0 18 7-24 61-78 (153)
396 3ajv_B TRNA-splicing endonucle 20.6 32 0.0011 28.3 1.1 26 7-32 96-122 (186)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.9e-59 Score=487.56 Aligned_cols=463 Identities=19% Similarity=0.258 Sum_probs=369.4
Q ss_pred CCCcccCCcceeccceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCce--eEEEeec-cCc
Q psy12697 107 TGPAITNGEEVHRLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQ--LVHSYKG-TGG 183 (602)
Q Consensus 107 ~~~~~~~~~~~~~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~-~~~ 183 (602)
++..++.+. ..+|++||+.+++....+.+|...|++++|||||++||+|+.|++|+|||+.+++ ....+.. .+.
T Consensus 29 dg~~l~~~~---~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~ 105 (611)
T 1nr0_A 29 AGDKIQYCN---GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGP 105 (611)
T ss_dssp TSSEEEEEE---TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSC
T ss_pred CCCEEEeCC---CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCc
Confidence 344444433 3589999999999999999999999999999999999999999999999997654 3445554 467
Q ss_pred eEEEEeCCCCCCCCCCCCccc-cccc--cccCCcceEeeCCCcceEEEEEcCCCC-EEEEeeCCCcEEEEeCCCCCCCCC
Q psy12697 184 IFEVCWNSRGTPPNPPESMEV-DASI--EIPQSKATKLIGHESEVFICAWNPVKD-FLASGSGDSTARIWDMTDSTKKDP 259 (602)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~l~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iw~~~~~~~~~~ 259 (602)
+..++|+|++..+........ ...+ .-.......+.+|...|.+++|+|++. .|++++.|++|++||..+.+..
T Consensus 106 v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~-- 183 (611)
T 1nr0_A 106 VKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFK-- 183 (611)
T ss_dssp EEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEE--
T ss_pred eEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEe--
Confidence 999999999987664433211 1111 112334456789999999999999986 6999999999999997653211
Q ss_pred ccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-Ccceeecc-------cccCCeEEEEEcc
Q psy12697 260 KELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTLG-------QHKGPIFALKWNK 331 (602)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~-------~~~~~i~~~~~~~ 331 (602)
. ....|...|.+++|+|++++|++|+.|+.|++||.. +.....+. +|.+.|.+++|+|
T Consensus 184 ---~-----------~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp 249 (611)
T 1nr0_A 184 ---S-----------TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP 249 (611)
T ss_dssp ---E-----------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT
T ss_pred ---e-----------eeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC
Confidence 0 112467889999999999999999999999999975 55555553 7999999999999
Q ss_pred CCCEEEEEecCCcEEEEeCCCCceeEEeeec---cCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeE
Q psy12697 332 RGNYILSAGVDKTTIIWDAASGQCEQQFSFH---SAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVN 408 (602)
Q Consensus 332 ~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~ 408 (602)
++++|++++.|++|++||+.++++...+..+ ......+.| .+..+++++.|+.+++|+...++....+.+|...|.
T Consensus 250 dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~ 328 (611)
T 1nr0_A 250 DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW-TKQALVSISANGFINFVNPELGSIDQVRYGHNKAIT 328 (611)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE-CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE-cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEE
Confidence 9999999999999999999999988877643 234455666 567799999999999999999988889999999999
Q ss_pred EEEECCCCCEEEEEECCCeEEEEeCCCCeeeEee-ccccccEEEEEECCCCCCCCCCCcceeeeee--------------
Q psy12697 409 AIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDL-QAHNKEIYTIKWSPTGPETSNPNMSLIFILK-------------- 473 (602)
Q Consensus 409 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-------------- 473 (602)
+++|+|+|++|++++.|+.|++||+.+++....+ ..|...+.+++|++++..........+..+.
T Consensus 329 ~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~ 408 (611)
T 1nr0_A 329 ALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVAN 408 (611)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEE
T ss_pred EEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeee
Confidence 9999999999999999999999999998877665 5688889999998765432211111100000
Q ss_pred ---------------------------------eccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCce--eeee
Q psy12697 474 ---------------------------------STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQC--EQQF 518 (602)
Q Consensus 474 ---------------------------------~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~ 518 (602)
.....|...+.+++|+|||++|++|+.|++|++||+.++.. +..
T Consensus 409 ~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~- 487 (611)
T 1nr0_A 409 KLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT- 487 (611)
T ss_dssp ECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-
T ss_pred ecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-
Confidence 00012456789999999999999999999999999987654 234
Q ss_pred cccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCC-CCceee--eecccccceEEEEecCCcEEEEEECCCCCeEEEecc
Q psy12697 519 SFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHS-DKPVKS--FEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASAS 594 (602)
Q Consensus 519 ~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~ 594 (602)
.+|...|++++|+||+ +|++++.|+.|++|++.+ ++.+.. +.+| ...|.+++|+|||++||+++.
T Consensus 488 ~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H-----------~~~V~~v~fspdg~~lasgs~ 556 (611)
T 1nr0_A 488 IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFH-----------TAKVACVSWSPDNVRLATGSL 556 (611)
T ss_dssp EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCC-----------SSCEEEEEECTTSSEEEEEET
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeec-----------ccceeEEEECCCCCEEEEEEC
Confidence 6799999999999999 999999999999999976 433322 1123 477999999999999999999
Q ss_pred CCeEEee
Q psy12697 595 DGSVFKN 601 (602)
Q Consensus 595 dg~v~i~ 601 (602)
|++|+|+
T Consensus 557 D~~v~lW 563 (611)
T 1nr0_A 557 DNSVIVW 563 (611)
T ss_dssp TSCEEEE
T ss_pred CCcEEEE
Confidence 9999985
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.4e-59 Score=483.34 Aligned_cols=459 Identities=27% Similarity=0.482 Sum_probs=385.6
Q ss_pred CCCCcccCCcceeccceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeec-cCce
Q psy12697 106 STGPAITNGEEVHRLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKG-TGGI 184 (602)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~ 184 (602)
+++.+++.+. .+++|+|||. +++++++|.+|.+.|++++|+||+++||+++.|++|+|||. +++.+..+.. ...+
T Consensus 26 pdg~~las~~--~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~~~~~~~v 101 (577)
T 2ymu_A 26 PDGQTIASAS--DDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV 101 (577)
T ss_dssp TTSSCEEEEE--TTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCE
T ss_pred CCCCEEEEEe--CCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEECCCCCE
Confidence 3455666553 4678999994 78999999999999999999999999999999999999996 5677777765 4567
Q ss_pred EEEEeCCCCCCCCCCCCccc------------------------------------------------------------
Q psy12697 185 FEVCWNSRGTPPNPPESMEV------------------------------------------------------------ 204 (602)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~------------------------------------------------------------ 204 (602)
..++|+|++..+........
T Consensus 102 ~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (577)
T 2ymu_A 102 RGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSS 181 (577)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSS
T ss_pred EEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceeccccceeeeeeccCCCc
Confidence 88889888754432110000
Q ss_pred -------------------cc---cccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccc
Q psy12697 205 -------------------DA---SIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKEL 262 (602)
Q Consensus 205 -------------------~~---~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~ 262 (602)
+. .++........+.+|...|.+++|+|++++|++++.|+.|++|+..... .
T Consensus 182 ~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~------~ 255 (577)
T 2ymu_A 182 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL------L 255 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE------E
T ss_pred ceeeeeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCCE------E
Confidence 00 0011223345567899999999999999999999999999999964211 1
Q ss_pred eEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecC
Q psy12697 263 QIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVD 342 (602)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 342 (602)
. ....|...|.+++|+|+++.+++++.|+.|++|+.+++....+.+|...|.+++|+|++++|++++.|
T Consensus 256 ~-----------~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d 324 (577)
T 2ymu_A 256 Q-----------TLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDD 324 (577)
T ss_dssp E-----------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred E-----------EEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCC
Confidence 1 11235688999999999999999999999999999999889999999999999999999999999999
Q ss_pred CcEEEEeCCCCceeEEeeeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEE
Q psy12697 343 KTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLAS 421 (602)
Q Consensus 343 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 421 (602)
+.|++||... ..+..+..+...+.+++|+|++ .+++++.++.+++||. +++.+..+.+|...|.+++|+|++++|++
T Consensus 325 ~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~ 402 (577)
T 2ymu_A 325 KTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIAS 402 (577)
T ss_dssp SCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred CeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEE
Confidence 9999999764 4566778889999999999985 5788999999999995 56788889999999999999999999999
Q ss_pred EECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcce-eee------eeeccCCccCCeEEEEEccCCCE
Q psy12697 422 CSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSL-IFI------LKSTLGQHKGPIFALKWNKRGNY 494 (602)
Q Consensus 422 ~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~v~~i~~s~~~~~ 494 (602)
++.|+.|++||. +++.+..+..|...+.+++|+|++..++...... +.. ....+.+|...|.+++|+|++++
T Consensus 403 ~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~ 481 (577)
T 2ymu_A 403 ASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQT 481 (577)
T ss_dssp EETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCE
T ss_pred EeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCE
Confidence 999999999995 5678888999999999999999998765443322 222 22455679999999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEec
Q psy12697 495 ILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKG 573 (602)
Q Consensus 495 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (602)
|++++.|+.|++||. +++++..+.+|...|++++|+||+ +|++++.|+.|++||. +++++..+.+|.
T Consensus 482 las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~---------- 549 (577)
T 2ymu_A 482 IASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS---------- 549 (577)
T ss_dssp EEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCS----------
T ss_pred EEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCC----------
Confidence 999999999999995 688999999999999999999999 9999999999999995 567777777765
Q ss_pred CCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 574 TGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 574 ~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
+.|++++|+|||++|++++.||+|+++
T Consensus 550 -~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 550 -SSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp -SCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred -CCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 789999999999999999999999985
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4e-56 Score=462.28 Aligned_cols=454 Identities=26% Similarity=0.435 Sum_probs=381.3
Q ss_pred eeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeecc-CceEEEEeCCCCCCCCCCCCcccccccc
Q psy12697 131 ECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGT-GGIFEVCWNSRGTPPNPPESMEVDASIE 209 (602)
Q Consensus 131 ~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (602)
+..++|.||++.|++++|||||++||+|+.|++|+|||. +++++..+.++ ..+.+++|+|++..+...........++
T Consensus 7 ~e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd 85 (577)
T 2ymu_A 7 KERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 85 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 345679999999999999999999999999999999995 78888888874 5689999999998877655444444455
Q ss_pred ccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCc----c------------------------
Q psy12697 210 IPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPK----E------------------------ 261 (602)
Q Consensus 210 ~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~----~------------------------ 261 (602)
........+.+|...|.+++|+|++++|++++.|+.+++|+.......... .
T Consensus 86 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 165 (577)
T 2ymu_A 86 RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKL 165 (577)
T ss_dssp TTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceec
Confidence 666777889999999999999999999999999999999996533210000 0
Q ss_pred -------ce-------EEEEEEecC-------------------C----CcccCCCCceeEEeeCCCCCeEEEEeCCCeE
Q psy12697 262 -------LQ-------IVLRHCISK-------------------G----GTEVPSNKDVTSLDWNNNGSFLATGSYDGYA 304 (602)
Q Consensus 262 -------~~-------~~~~~~~~~-------------------~----~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 304 (602)
.. ........+ . .....|...|.+++|+|++++|++++.|+.|
T Consensus 166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i 245 (577)
T 2ymu_A 166 WNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 245 (577)
T ss_dssp ECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE
T ss_pred cccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 00 000000000 0 0112467789999999999999999999999
Q ss_pred EEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCC-eEEEeeCC
Q psy12697 305 RIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTD 383 (602)
Q Consensus 305 ~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 383 (602)
++|+.+++....+..|...|.+++|+|+++.|++++.|+.+++||. +++....+..|...+.+++++|++ .+++++.|
T Consensus 246 ~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d 324 (577)
T 2ymu_A 246 KLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDD 324 (577)
T ss_dssp EEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCC
Confidence 9999999889999999999999999999999999999999999996 467778888999999999999985 58889999
Q ss_pred CeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCC
Q psy12697 384 QHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSN 463 (602)
Q Consensus 384 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 463 (602)
+.|++||... +.+..+.+|...+.+++|+|++++|++++.||.|++||. +++.+..+..|...|.+++|+|++..++.
T Consensus 325 ~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~ 402 (577)
T 2ymu_A 325 KTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIAS 402 (577)
T ss_dssp SCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred CeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEE
Confidence 9999999764 456778899999999999999999999999999999995 56888899999999999999999987765
Q ss_pred CCcce-eee------eeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCCc-e
Q psy12697 464 PNMSL-IFI------LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-S 535 (602)
Q Consensus 464 ~~~~~-~~~------~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~ 535 (602)
..... +.. ....+.+|...|.+++|+||+++|++++.|+.|++||. +++.+..+.+|...|.+++|+|++ +
T Consensus 403 ~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~ 481 (577)
T 2ymu_A 403 ASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQT 481 (577)
T ss_dssp EETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCE
T ss_pred EeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCE
Confidence 43322 222 22345679999999999999999999999999999996 578888999999999999999999 9
Q ss_pred EEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 536 FASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 536 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
|++++.|+.|++||. +++++..+.+|. ..|++++|+|||++||+++.||.|+|.
T Consensus 482 las~~~d~~i~iw~~-~~~~~~~~~~h~-----------~~v~~l~~s~dg~~l~s~~~dg~v~lw 535 (577)
T 2ymu_A 482 IASASDDKTVKLWNR-NGQLLQTLTGHS-----------SSVRGVAFSPDGQTIASASDDKTVKLW 535 (577)
T ss_dssp EEEEETTSEEEEEET-TSCEEEEEECCS-----------SCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred EEEEeCCCEEEEEcC-CCCEEEEEeCCC-----------CCEEEEEEcCCCCEEEEEECcCEEEEE
Confidence 999999999999995 567777777664 779999999999999999999999874
No 4
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.7e-55 Score=455.30 Aligned_cols=438 Identities=18% Similarity=0.267 Sum_probs=342.0
Q ss_pred CCCCcccCCcceeccceeeeecccc--eeeeeeeccCCceEEEEECCCCCeEEEeeCC----ceEEEEecCCceeEEEee
Q psy12697 106 STGPAITNGEEVHRLTLPLWDVERG--ECLNTLTRHTEPVYSVAFSPDGKFLASGSFD----KCVHIWSARTGQLVHSYK 179 (602)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~vwd~~~~--~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d----~~v~iwd~~~~~~~~~~~ 179 (602)
+++.+++++.. +++|+|||+.++ ....++.+|.++|.+++|+|||++|++++.+ +.|++|| +++....+.
T Consensus 69 pdg~~lasg~~--d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~ 144 (611)
T 1nr0_A 69 PSGYYCASGDV--HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLT 144 (611)
T ss_dssp TTSSEEEEEET--TSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCC
T ss_pred CCCcEEEEEeC--CCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceec
Confidence 35566666544 689999999754 3456889999999999999999999998865 4788887 455555666
Q ss_pred cc-CceEEEEeCCCCCC-CCCCCCcccccccccc-CCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCC
Q psy12697 180 GT-GGIFEVCWNSRGTP-PNPPESMEVDASIEIP-QSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTK 256 (602)
Q Consensus 180 ~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~ 256 (602)
++ ..+..++|+|++.. +...........+... ......+.+|...|.+++|+|++++|++++.|++|++||+.+++.
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK 224 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcE
Confidence 54 56899999999864 3322222222222222 233467889999999999999999999999999999999987653
Q ss_pred CCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCC-cce---------------------
Q psy12697 257 KDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDG-SLK--------------------- 314 (602)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~-~~~--------------------- 314 (602)
..... ........|...|.+++|+|++++|++++.|+.|++||+.. +..
T Consensus 225 ~~~~~---------~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (611)
T 1nr0_A 225 TGVFE---------DDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ 295 (611)
T ss_dssp EEECB---------CTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSS
T ss_pred eeeec---------cccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCC
Confidence 21100 00011125778999999999999999999999999999763 221
Q ss_pred ----------------------eecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEe-eeccCCeeeeec
Q psy12697 315 ----------------------STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF-SFHSAPALDVDW 371 (602)
Q Consensus 315 ----------------------~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~-~~~~~~~~~~~~ 371 (602)
..+.+|...|.+++|+|++++|++++.|++|++||+.+++....+ ..|...+.++.|
T Consensus 296 ~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~ 375 (611)
T 1nr0_A 296 ALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 375 (611)
T ss_dssp CEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEE
T ss_pred EEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEE
Confidence 234578999999999999999999999999999999999887665 568889999999
Q ss_pred cCCCeEEEeeCCCeEEEEEcCCCcee-----------------------------------------eEeccCCCCeEEE
Q psy12697 372 QSNTSFASCSTDQHIHVCKLHSDKPV-----------------------------------------KSFEGHTNEVNAI 410 (602)
Q Consensus 372 ~~~~~~~~~~~~~~i~i~d~~~~~~~-----------------------------------------~~~~~~~~~i~~~ 410 (602)
++++.+++++.|+.+++|+....... ..+ .|...+.++
T Consensus 376 s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~v 454 (611)
T 1nr0_A 376 TSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCV 454 (611)
T ss_dssp CTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEE
T ss_pred CCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee-ecCCCceEE
Confidence 99999999999999999997653211 111 145567889
Q ss_pred EECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEcc
Q psy12697 411 KWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNK 490 (602)
Q Consensus 411 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~ 490 (602)
+|+|+|++|++|+.|+.|++||+.++...... . .+|...|.+++|+|
T Consensus 455 a~spdg~~lasgs~D~~v~lwd~~~~~~~~~~--------------------------------~-~~h~~~v~~v~fsp 501 (611)
T 1nr0_A 455 ALSNDKQFVAVGGQDSKVHVYKLSGASVSEVK--------------------------------T-IVHPAEITSVAFSN 501 (611)
T ss_dssp EECTTSCEEEEEETTSEEEEEEEETTEEEEEE--------------------------------E-EECSSCEEEEEECT
T ss_pred EEeCCCCEEEEeCCCCeEEEEEccCCceeeee--------------------------------c-cCCCCceEEEEECC
Confidence 99999999999999999999988764321100 1 23777888999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCC-Cceeee--ecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCC-ce-eeeecccc
Q psy12697 491 RGNYILSAGVDKTTIIWDAAS-GQCEQQ--FSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDK-PV-KSFEGHTT 564 (602)
Q Consensus 491 ~~~~l~s~~~dg~i~iwd~~~-~~~~~~--~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~-~~-~~~~~~~~ 564 (602)
||++|++++.|++|++||+.+ ++++.. +..|...|.+++|+||+ +|++++.|++|++|++.++. .+ ..+.+|.
T Consensus 502 dg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~- 580 (611)
T 1nr0_A 502 NGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHA- 580 (611)
T ss_dssp TSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSST-
T ss_pred CCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCc-
Confidence 999999999999999999988 665544 34599999999999999 99999999999999998765 22 3444441
Q ss_pred cceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 565 GQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 565 ~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
...|.+++|+||++ |++++.||+|+++
T Consensus 581 ---------~~~v~~v~fs~d~~-l~s~~~D~~i~lW 607 (611)
T 1nr0_A 581 ---------MSSVNSVIWLNETT-IVSAGQDSNIKFW 607 (611)
T ss_dssp ---------TSCEEEEEEEETTE-EEEEETTSCEEEE
T ss_pred ---------ccCeeEEEEcCCCE-EEEecCCCCEEEE
Confidence 26799999999998 9999999999985
No 5
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.1e-53 Score=447.89 Aligned_cols=444 Identities=19% Similarity=0.299 Sum_probs=361.4
Q ss_pred ccceeeeecccc----eeeeeeeccCCc-eEEEEECC--CCCeEEEeeCCceEEEEecCCc--------eeEEEeec-cC
Q psy12697 119 RLTLPLWDVERG----ECLNTLTRHTEP-VYSVAFSP--DGKFLASGSFDKCVHIWSARTG--------QLVHSYKG-TG 182 (602)
Q Consensus 119 ~~~i~vwd~~~~----~~~~~l~~h~~~-V~~~~~s~--d~~~l~s~~~d~~v~iwd~~~~--------~~~~~~~~-~~ 182 (602)
++.|+|||+.++ +.+..+.+|... |++++|+| ++++||+++.||.|+|||+.++ +.+..+.. ..
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~ 117 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAG 117 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSS
T ss_pred CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccc
Confidence 468999999999 999999999999 99999999 9999999999999999999865 66666664 56
Q ss_pred ceEEEEeCCCCCCCCCCCCcc----ccccccccCCcceEeeCCCcceEEEEEcCCCC-EEEEeeCCCcEEEEeCCCCCCC
Q psy12697 183 GIFEVCWNSRGTPPNPPESME----VDASIEIPQSKATKLIGHESEVFICAWNPVKD-FLASGSGDSTARIWDMTDSTKK 257 (602)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iw~~~~~~~~ 257 (602)
++..++|+|++..+....... ....++ .......+.+|...|.+++|+|+++ .+++++.|+.|++||+.+.+..
T Consensus 118 ~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~ 196 (615)
T 1pgu_A 118 PISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS 196 (615)
T ss_dssp CEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEE
T ss_pred cEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCccee
Confidence 799999999998766544331 111122 4445677889999999999999997 8999999999999998765321
Q ss_pred CCccceEEEEEEecCCCcccCCCC---ceeEEeeCCC-CCeEEEEeCCCeEEEEcCC-Ccceeec-c---cccCCeEEEE
Q psy12697 258 DPKELQIVLRHCISKGGTEVPSNK---DVTSLDWNNN-GSFLATGSYDGYARIWTSD-GSLKSTL-G---QHKGPIFALK 328 (602)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~-~~~l~~~~~dg~i~i~~~~-~~~~~~~-~---~~~~~i~~~~ 328 (602)
. ....|.. .|.+++|+|+ +++|++++.||.|++||+. ++....+ . .|...|.+++
T Consensus 197 ~----------------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~ 260 (615)
T 1pgu_A 197 A----------------SDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALS 260 (615)
T ss_dssp E----------------EECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEE
T ss_pred e----------------eecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEE
Confidence 1 0112345 8999999999 9999999999999999976 5666666 5 8999999999
Q ss_pred EccCCCEEEEEecCCcEEEEeCCCCceeEEeeec----cCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCC
Q psy12697 329 WNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH----SAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHT 404 (602)
Q Consensus 329 ~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~ 404 (602)
|+ ++++|++++.|+.|++||+++++....+..+ ...+..+.|..+..+++++.++.|++||+.+++++..+.+|.
T Consensus 261 ~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~ 339 (615)
T 1pgu_A 261 WL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHN 339 (615)
T ss_dssp ES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCS
T ss_pred Ec-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCC
Confidence 99 9999999999999999999999998888776 356778888878889999999999999999999999998888
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCC---------------------------
Q psy12697 405 NEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPT--------------------------- 457 (602)
Q Consensus 405 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~--------------------------- 457 (602)
..|.+++| |+ |++++.||.|++||+. .+. ..|...|.+++|.+.
T Consensus 340 ~~v~~~~~-~~---l~~~~~dg~i~~w~~~---~~~--~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~ 410 (615)
T 1pgu_A 340 KGITALTV-NP---LISGSYDGRIMEWSSS---SMH--QDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPK 410 (615)
T ss_dssp SCEEEEET-TT---TEEEETTSCEEETTTT---EEE--CCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEE
T ss_pred CCEEEEEe-cC---cEEECCCCeEEEEEch---hhc--CcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCce
Confidence 88888888 76 6666666666666654 111 344444444444221
Q ss_pred ---------------------------------------------CCCCCCCC--cceeeee-------e-eccCCccCC
Q psy12697 458 ---------------------------------------------GPETSNPN--MSLIFIL-------K-STLGQHKGP 482 (602)
Q Consensus 458 ---------------------------------------------~~~~~~~~--~~~~~~~-------~-~~~~~~~~~ 482 (602)
+..++... ...+..+ . ..+..|...
T Consensus 411 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~ 490 (615)
T 1pgu_A 411 VASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAK 490 (615)
T ss_dssp EEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSC
T ss_pred EEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCc
Confidence 11111111 1111111 0 456679999
Q ss_pred eEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc-cCCCeeEeeecC----------Cc-eEEEeeCCCcEEEeec
Q psy12697 483 IFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF-HSAPALDVDWQS----------NT-SFASCSTDQHIHVCKL 550 (602)
Q Consensus 483 v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~----------~~-~l~~~~~d~~i~iw~~ 550 (602)
|.+++|+|++++|++++.||.|++||+.+++++..+.+ |...|++++|+| ++ +|++++.||.|++||+
T Consensus 491 v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~ 570 (615)
T 1pgu_A 491 PSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSV 570 (615)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEES
T ss_pred eEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEEC
Confidence 99999999999999999999999999999999999988 999999999999 89 9999999999999999
Q ss_pred CCC-CceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 551 HSD-KPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 551 ~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
.++ +++..+.+|. +.|.+++|+||++ |++++.||.|+++
T Consensus 571 ~~~~~~~~~~~~h~-----------~~v~~l~~s~~~~-l~s~~~d~~v~iw 610 (615)
T 1pgu_A 571 KRPMKIIKALNAHK-----------DGVNNLLWETPST-LVSSGADACIKRW 610 (615)
T ss_dssp SCTTCCEEETTSST-----------TCEEEEEEEETTE-EEEEETTSCEEEE
T ss_pred CCCceechhhhcCc-----------cceEEEEEcCCCC-eEEecCCceEEEE
Confidence 987 6777777765 7799999999999 9999999999875
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.1e-52 Score=411.53 Aligned_cols=288 Identities=27% Similarity=0.453 Sum_probs=259.1
Q ss_pred eeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcccccccccc
Q psy12697 132 CLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIP 211 (602)
Q Consensus 132 ~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (602)
....+.+|.++|++++|+|++++|++|+.|++|+|||+.+++..
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~------------------------------------ 143 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE------------------------------------ 143 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC------------------------------------
T ss_pred ceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE------------------------------------
Confidence 35678899999999999999999999999999999999988765
Q ss_pred CCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCC
Q psy12697 212 QSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNN 291 (602)
Q Consensus 212 ~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 291 (602)
..+.+|...|.+++|+|++++|++|+.|++|++||+.+..
T Consensus 144 ----~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~------------------------------------ 183 (410)
T 1vyh_C 144 ----RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE------------------------------------ 183 (410)
T ss_dssp ----EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC------------------------------------
T ss_pred ----EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc------------------------------------
Confidence 4456799999999999999999999999999999985431
Q ss_pred CCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeec
Q psy12697 292 GSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDW 371 (602)
Q Consensus 292 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 371 (602)
....+.+|...|.+++|+|++++|++++.|++|++||++++.++..+..|...+.++.+
T Consensus 184 ---------------------~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~ 242 (410)
T 1vyh_C 184 ---------------------CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242 (410)
T ss_dssp ---------------------EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred ---------------------eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEE
Confidence 12234568889999999999999999999999999999999999999999999999999
Q ss_pred cCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCC--------------------CCEEEEEECCCeEEE
Q psy12697 372 QSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQ--------------------GLLLASCSDDMTLKI 430 (602)
Q Consensus 372 ~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~--------------------~~~l~~~~~dg~i~i 430 (602)
++++ .+++++.|+.|++||+.+++....+.+|...|.+++|+|+ +.+|++|+.|+.|++
T Consensus 243 ~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i 322 (410)
T 1vyh_C 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322 (410)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEE
Confidence 9875 5889999999999999999999999999999999999996 678999999999999
Q ss_pred EeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCC
Q psy12697 431 WSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 510 (602)
Q Consensus 431 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~ 510 (602)
||++++.++..+.+| ...|.+++|+|+|++|++|+.||.|++||+.
T Consensus 323 wd~~~~~~~~~~~~h----------------------------------~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 323 WDVSTGMCLMTLVGH----------------------------------DNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp EETTTTEEEEEEECC----------------------------------SSCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred EECCCCceEEEEECC----------------------------------CCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 999999888776654 4556666777788999999999999999999
Q ss_pred CCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeec
Q psy12697 511 SGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKL 550 (602)
Q Consensus 511 ~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~ 550 (602)
+++++..+.+|...|++++|+|++ .|++|+.|+.|++|++
T Consensus 369 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp TSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 999999999999999999999999 9999999999999985
No 7
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.8e-52 Score=473.10 Aligned_cols=479 Identities=19% Similarity=0.265 Sum_probs=383.7
Q ss_pred eccceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeecc-CceEEEEeCCCCCCC
Q psy12697 118 HRLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGT-GGIFEVCWNSRGTPP 196 (602)
Q Consensus 118 ~~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 196 (602)
.+++|+|||+.+++.+.++.+|.+.|.+++|+|++++||+++.|++|+|||+.+++.+..+..+ ..+..++|++++...
T Consensus 635 ~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 714 (1249)
T 3sfz_A 635 ADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHL 714 (1249)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCC
T ss_pred CCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCce
Confidence 5689999999999999999999999999999999999999999999999999999999998765 568899999965433
Q ss_pred C--CCCCccccccccc-cCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceE---------
Q psy12697 197 N--PPESMEVDASIEI-PQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQI--------- 264 (602)
Q Consensus 197 ~--~~~~~~~~~~~~~-~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~--------- 264 (602)
. ..........+++ .......+.+|...|.+++|+|++++|++++.||.|++||+.++..........
T Consensus 715 ~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 794 (1249)
T 3sfz_A 715 LLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPP 794 (1249)
T ss_dssp EEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC-------
T ss_pred EEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCcc
Confidence 2 2222222223333 334456778999999999999999999999999999999997653211100000
Q ss_pred ------EEEEEecCC------------------------CcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-Ccc
Q psy12697 265 ------VLRHCISKG------------------------GTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSL 313 (602)
Q Consensus 265 ------~~~~~~~~~------------------------~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~ 313 (602)
.....+.+. .....+...+.+++|+|+++++++++.+|.|++|+.. +..
T Consensus 795 ~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~ 874 (1249)
T 3sfz_A 795 EDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK 874 (1249)
T ss_dssp -CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEE
T ss_pred ccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 000000000 0112567889999999999999999999999999987 566
Q ss_pred eeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCce-----------------------------eE-------
Q psy12697 314 KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQC-----------------------------EQ------- 357 (602)
Q Consensus 314 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~-----------------------------~~------- 357 (602)
...+.+|...|.+++|+|++++|++++.||.+++||+.+... ..
T Consensus 875 ~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1249)
T 3sfz_A 875 VADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTG 954 (1249)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSC
T ss_pred eeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcc
Confidence 777889999999999999999999999999999999653210 00
Q ss_pred -EeeeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCC
Q psy12697 358 -QFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDK 435 (602)
Q Consensus 358 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 435 (602)
........+.+++++|++ .+++++.+|.|++||+.+++....+.+|...|++++|+|++++|++++.||.|++||+.+
T Consensus 955 ~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 955 QIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT 1034 (1249)
T ss_dssp CEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTT
T ss_pred eEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 011234568888999885 588899999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeee-------eccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEe
Q psy12697 436 DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILK-------STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 508 (602)
Q Consensus 436 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd 508 (602)
++.. .+..|...+.++.|+|++..+.......+..+. ..+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 1035 ~~~~-~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd 1113 (1249)
T 3sfz_A 1035 GDYV-FLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWS 1113 (1249)
T ss_dssp TEEE-CCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEEC
T ss_pred CceE-EEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 8776 456889999999999987655444444443332 34567999999999999999999999999999999
Q ss_pred CCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCC
Q psy12697 509 AASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGD 587 (602)
Q Consensus 509 ~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~ 587 (602)
+.+++++..+.+|...|++++|+|++ +|++++.||.|++||+.+++.+..+....... ....+.+.|++++|+|||+
T Consensus 1114 ~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~v~~l~fs~dg~ 1191 (1249)
T 3sfz_A 1114 FDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEE--GTATHGGWVTDVCFSPDSK 1191 (1249)
T ss_dssp SSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC---------CCSCCCEEEECTTSS
T ss_pred CCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccc--cccccCceEEEEEECCCCC
Confidence 99999999999999999999999999 99999999999999999998776652211000 0111247799999999999
Q ss_pred eEEEeccCCeEEee
Q psy12697 588 KVGASASDGSVFKN 601 (602)
Q Consensus 588 ~l~~~~~dg~v~i~ 601 (602)
+|++++ |.|++.
T Consensus 1192 ~l~s~~--g~v~vw 1203 (1249)
T 3sfz_A 1192 TLVSAG--GYLKWW 1203 (1249)
T ss_dssp CEEEES--SSEEEB
T ss_pred EEEECC--CeEEEE
Confidence 999886 777764
No 8
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1e-50 Score=458.73 Aligned_cols=453 Identities=18% Similarity=0.242 Sum_probs=377.9
Q ss_pred eeccceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccC--------------
Q psy12697 117 VHRLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTG-------------- 182 (602)
Q Consensus 117 ~~~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-------------- 182 (602)
..+++|++||+.+++++.++.+|.+.|++++|+|++++|++++.||+|++||+.+++....+....
T Consensus 720 ~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1249)
T 3sfz_A 720 SNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEV 799 (1249)
T ss_dssp ETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCC
T ss_pred eCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccc
Confidence 346889999999999999999999999999999999999999999999999999998887765422
Q ss_pred ceEEEEeCCCCCCCCCCCCcccccccccc-CCcce-EeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCc
Q psy12697 183 GIFEVCWNSRGTPPNPPESMEVDASIEIP-QSKAT-KLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPK 260 (602)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 260 (602)
.+..++|+++|..+........ ..+... ..... ...+|...|.+++|+|+++++++++.||.|++|++.++...
T Consensus 800 ~v~~~~~s~dg~~l~~~~~~~v-~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~--- 875 (1249)
T 3sfz_A 800 IVKCCSWSADGDKIIVAAKNKV-LLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKV--- 875 (1249)
T ss_dssp CBCCCCBCTTSSEEEEEETTEE-EEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEE---
T ss_pred eEEEEEECCCCCEEEEEcCCcE-EEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee---
Confidence 4667888888877665443221 122222 22222 23489999999999999999999999999999999865321
Q ss_pred cceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcc---------------------------
Q psy12697 261 ELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSL--------------------------- 313 (602)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~--------------------------- 313 (602)
. ....|...|.+++|+|+++++++++.||.|++|+.....
T Consensus 876 --~-----------~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1249)
T 3sfz_A 876 --A-----------DCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDN 942 (1249)
T ss_dssp --E-----------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEES
T ss_pred --e-----------ecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecC
Confidence 0 112457889999999999999999999999999853100
Q ss_pred ---e--------eecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCC-eEEEee
Q psy12697 314 ---K--------STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCS 381 (602)
Q Consensus 314 ---~--------~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 381 (602)
. .....+...+.+++|+|+++++++++.+|.|.+||+.+++....+..|...+.+++|+|++ .+++++
T Consensus 943 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 1022 (1249)
T 3sfz_A 943 IRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSS 1022 (1249)
T ss_dssp SSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEEC
T ss_pred CcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEc
Confidence 0 0011234679999999999999999999999999999999999999999999999999985 588999
Q ss_pred CCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCC
Q psy12697 382 TDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPET 461 (602)
Q Consensus 382 ~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 461 (602)
.||.|++||+.+++... +..|...|.+++|+|++ .+++++.||.|++||+.+++....+..|...+.+++|+|++..+
T Consensus 1023 ~dg~i~vwd~~~~~~~~-~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l 1100 (1249)
T 3sfz_A 1023 EDSVIQVWNWQTGDYVF-LQAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKF 1100 (1249)
T ss_dssp SSSBEEEEETTTTEEEC-CBCCSSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSC
T ss_pred CCCEEEEEECCCCceEE-EecCCCcEEEEEEcCCC-cEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEE
Confidence 99999999999987664 55799999999999976 57889999999999999999999999999999999999999876
Q ss_pred CCCCccee-ee-------eeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeee---------cccCCC
Q psy12697 462 SNPNMSLI-FI-------LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF---------SFHSAP 524 (602)
Q Consensus 462 ~~~~~~~~-~~-------~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---------~~~~~~ 524 (602)
+....... .. ....+.+|...|++++|+|+|++|++++.||.|++||+.+++.+..+ ..|.+.
T Consensus 1101 ~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 1180 (1249)
T 3sfz_A 1101 SSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGW 1180 (1249)
T ss_dssp EEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSC
T ss_pred EEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCce
Confidence 65443322 11 12356689999999999999999999999999999999999887765 578999
Q ss_pred eeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 525 ALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 525 v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
|++++|+||+ ++++++ |.|++||+.+++.+..+..+. ..|.+++|+|||++|++++.||.+++.
T Consensus 1181 v~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~~-----------~~i~~~~~s~dg~~l~~~~~dg~v~vw 1245 (1249)
T 3sfz_A 1181 VTDVCFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTNG-----------TNLKKIHVSPDFRTYVTVDNLGILYIL 1245 (1249)
T ss_dssp CCEEEECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCSS-----------CCCCCCEECSSSCCEEEECTTCCEEEE
T ss_pred EEEEEECCCCCEEEECC--CeEEEEECCCCceeeeeeccC-----------CcccEEEECCCCCEEEEecCCcEEEEE
Confidence 9999999999 888775 899999999998887776654 678999999999999999999999874
No 9
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-48 Score=417.14 Aligned_cols=450 Identities=11% Similarity=0.062 Sum_probs=329.6
Q ss_pred eeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCc-
Q psy12697 136 LTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSK- 214 (602)
Q Consensus 136 l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 214 (602)
..+|.+.|++++|+|++++||+|+.||+|+||+..+++....+.....+..++|++ +..+...........+++....
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKV 91 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcE
Confidence 35899999999999999999999999999999999998888777778899999999 6644444433333344443333
Q ss_pred ceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCC-CcccCCCCceeEEeeCCC-C
Q psy12697 215 ATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKG-GTEVPSNKDVTSLDWNNN-G 292 (602)
Q Consensus 215 ~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~-~ 292 (602)
...+ .|...|++++|+|++++|++|+.||.|++||+.++... .......... .....|...|.+++|+|+ +
T Consensus 92 ~~~~-~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~------~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~ 164 (902)
T 2oaj_A 92 LTTV-FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS------SFKLDNLQKSSFFPAARLSPIVSIQWNPRDI 164 (902)
T ss_dssp EEEE-ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE------EEEECCHHHHHTCSSSCCCCCCEEEEETTEE
T ss_pred EEEE-cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc------cceeccccccccccccCCCCeEEEEEccCCC
Confidence 3334 47789999999999999999999999999999876421 0000000000 112346789999999996 5
Q ss_pred CeEEEEeCCCeEEEEcCCC-cceeecccc------------------cCCeEEEEEccCCCEEEEEecCCcEEEEeCCCC
Q psy12697 293 SFLATGSYDGYARIWTSDG-SLKSTLGQH------------------KGPIFALKWNKRGNYILSAGVDKTTIIWDAASG 353 (602)
Q Consensus 293 ~~l~~~~~dg~i~i~~~~~-~~~~~~~~~------------------~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 353 (602)
..+++|+.||.| +||++. .....+..| ...|.+++|+|+|++|++++.||.|++||++++
T Consensus 165 ~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 165 GTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp EEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC
T ss_pred CEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 789999999999 999874 344444433 578999999999999999999999999999999
Q ss_pred ceeEEee-----e-------------ccCCeeeeecc----CC--CeEEEeeCC-----CeEEEEEcC------------
Q psy12697 354 QCEQQFS-----F-------------HSAPALDVDWQ----SN--TSFASCSTD-----QHIHVCKLH------------ 392 (602)
Q Consensus 354 ~~~~~~~-----~-------------~~~~~~~~~~~----~~--~~~~~~~~~-----~~i~i~d~~------------ 392 (602)
+++.... . +...+.+++|+ |+ ..+++++.+ ..+.+|++.
T Consensus 244 ~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~ 323 (902)
T 2oaj_A 244 HMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEG 323 (902)
T ss_dssp CEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHH
T ss_pred cEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhh
Confidence 8765311 1 23468899995 43 346666555 378888852
Q ss_pred ------CCceeeEec-cCCCCeEEEEECC----------CCCEEEEEECCCeEEEEeCCCCeeeEe-------ecccccc
Q psy12697 393 ------SDKPVKSFE-GHTNEVNAIKWDP----------QGLLLASCSDDMTLKIWSLDKDNCVHD-------LQAHNKE 448 (602)
Q Consensus 393 ------~~~~~~~~~-~~~~~i~~~~~~~----------~~~~l~~~~~dg~i~iwd~~~~~~~~~-------~~~~~~~ 448 (602)
+.+....+. .+...|..+.+.+ +...+++++.||.|++||+.++..... +..|...
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~ 403 (902)
T 2oaj_A 324 MKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPL 403 (902)
T ss_dssp HHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTB
T ss_pred hhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCC
Confidence 222233333 4667888888866 344789999999999999987754322 3445566
Q ss_pred EEEEEEC----------------------------------CCCCCCCCCCcce-eeeeee---cc--------------
Q psy12697 449 IYTIKWS----------------------------------PTGPETSNPNMSL-IFILKS---TL-------------- 476 (602)
Q Consensus 449 i~~~~~~----------------------------------~~~~~~~~~~~~~-~~~~~~---~~-------------- 476 (602)
+++++++ |++..++.+.... +..+.. .+
T Consensus 404 v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~ 483 (902)
T 2oaj_A 404 ATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTL 483 (902)
T ss_dssp EEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHT
T ss_pred eeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhc
Confidence 7666663 3333222211111 111110 01
Q ss_pred -CCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCc------------------------------------------
Q psy12697 477 -GQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ------------------------------------------ 513 (602)
Q Consensus 477 -~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~------------------------------------------ 513 (602)
.+|...|.+++|+|||++||+|+.||+|+|||+.+++
T Consensus 484 ~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (902)
T 2oaj_A 484 NKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQ 563 (902)
T ss_dssp TCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSE
T ss_pred CCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCC
Confidence 1688899999999999999999999999999998762
Q ss_pred ---eeeeecccCCCeeEeeecCCceEEEeeCCCcEEEeecCCCCceeeeecccccceEEEE--ecCCcEEEEEEC-----
Q psy12697 514 ---CEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSY--KGTGGIFEVCWN----- 583 (602)
Q Consensus 514 ---~~~~~~~~~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~s----- 583 (602)
++..+.+|.+.|++++|||||+||+|+.|++|++||++++..+...... .+ .+.+.|++|+|+
T Consensus 564 g~~~~~~l~~h~~~V~svafSpdG~lAsgs~D~tv~lwd~~~~~~~~~~~~~-------~~~~gh~~~V~sv~Fs~~~~~ 636 (902)
T 2oaj_A 564 GFMPSTAVHANKGKTSAINNSNIGFVGIAYAAGSLMLIDRRGPAIIYMENIR-------EISGAQSACVTCIEFVIMEYG 636 (902)
T ss_dssp EEEEEEEECCCSCSEEEEEECBTSEEEEEETTSEEEEEETTTTEEEEEEEGG-------GTCSSCCCCEEEEEEEEEECT
T ss_pred ccceeEEEEcCCCcEEEEEecCCcEEEEEeCCCcEEEEECCCCeEEEEeehh-------HhccccccceEEEEEEEEecC
Confidence 3677888999999999999999999999999999998776654321100 01 123679999999
Q ss_pred CCC---CeEEEeccCCeEEee
Q psy12697 584 SRG---DKVGASASDGSVFKN 601 (602)
Q Consensus 584 pdg---~~l~~~~~dg~v~i~ 601 (602)
||| ++|++++.||+|+++
T Consensus 637 ~Dg~~~~~l~sgs~D~tv~~w 657 (902)
T 2oaj_A 637 DDGYSSILMVCGTDMGEVITY 657 (902)
T ss_dssp TSSSEEEEEEEEETTSEEEEE
T ss_pred CCCCcceEEEEEecCCcEEEE
Confidence 886 899999999999975
No 10
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.5e-47 Score=397.03 Aligned_cols=428 Identities=15% Similarity=0.164 Sum_probs=353.5
Q ss_pred ccCCceEEEEECCCCCeEEEeeCCceEEEEecCCc----eeEEEeecc-Cc-eEEEEeCC--CCCCCCCCCCcccccccc
Q psy12697 138 RHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTG----QLVHSYKGT-GG-IFEVCWNS--RGTPPNPPESMEVDASIE 209 (602)
Q Consensus 138 ~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~----~~~~~~~~~-~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~ 209 (602)
.|.+.|.+++|+|||++||+++ ++.|+|||+.++ +....+..+ .. +..++|+| ++..+...........+.
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 94 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEe
Confidence 5889999999999999999998 889999999999 888888764 45 89999999 988776655544444444
Q ss_pred cc---------CCcceEeeCCCcceEEEEEcCCCCEEEEeeCC----CcEEEEeCCCCCCCCCccceEEEEEEecCCCcc
Q psy12697 210 IP---------QSKATKLIGHESEVFICAWNPVKDFLASGSGD----STARIWDMTDSTKKDPKELQIVLRHCISKGGTE 276 (602)
Q Consensus 210 ~~---------~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (602)
+. ......+.+|...|.+++|+|++++|++++.+ +.|.+||.. .. .. ..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~--~~-----~~-----------~~ 156 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG--NS-----LG-----------EV 156 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC--CE-----EE-----------EC
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC--Cc-----ce-----------ee
Confidence 42 24456677899999999999999999999988 689999832 11 00 11
Q ss_pred cCCCCceeEEeeCCCCC-eEEEEeCCCeEEEEcCC-CcceeecccccC---CeEEEEEccC-CCEEEEEecCCcEEEEeC
Q psy12697 277 VPSNKDVTSLDWNNNGS-FLATGSYDGYARIWTSD-GSLKSTLGQHKG---PIFALKWNKR-GNYILSAGVDKTTIIWDA 350 (602)
Q Consensus 277 ~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~---~i~~~~~~~~-~~~l~~~~~dg~i~~wd~ 350 (602)
..|...|.+++|+|+++ .+++++.||.|++||.. ++....+..|.. .|.+++|+|+ +++|++++.||.|++||+
T Consensus 157 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~ 236 (615)
T 1pgu_A 157 SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDG 236 (615)
T ss_dssp CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEET
T ss_pred ecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 24578899999999998 79999999999999976 566677888998 9999999999 999999999999999999
Q ss_pred CCCceeEEe-e---eccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccC----CCCeEEEEECCCCCEEEEE
Q psy12697 351 ASGQCEQQF-S---FHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGH----TNEVNAIKWDPQGLLLASC 422 (602)
Q Consensus 351 ~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~ 422 (602)
.+++.+..+ . .|...+.++.|+.+..+++++.|+.|++||+.+++.+..+..+ ...+.++.|+ ++++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 315 (615)
T 1pgu_A 237 KSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISL 315 (615)
T ss_dssp TTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEE
T ss_pred CCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEE
Confidence 999999988 6 8899999999994467899999999999999999998888876 3678888886 89999999
Q ss_pred ECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceee--------------------------------
Q psy12697 423 SDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIF-------------------------------- 470 (602)
Q Consensus 423 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-------------------------------- 470 (602)
+.||.|++||+.+++.+..+..|...+.+++| |+ .........+.
T Consensus 316 ~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~--l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d 392 (615)
T 1pgu_A 316 SLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP--LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWD 392 (615)
T ss_dssp ETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT--TEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETT
T ss_pred ECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC--cEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCC
Confidence 99999999999999999999999999999999 76 11111000000
Q ss_pred ----eeeec----------------------------------------cCCccCCeEEEEEccCCCEEEEEeC-CCeEE
Q psy12697 471 ----ILKST----------------------------------------LGQHKGPIFALKWNKRGNYILSAGV-DKTTI 505 (602)
Q Consensus 471 ----~~~~~----------------------------------------~~~~~~~v~~i~~s~~~~~l~s~~~-dg~i~ 505 (602)
.+... ...+...+.+++|+ +++|++++. |+.|+
T Consensus 393 ~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~i~ 470 (615)
T 1pgu_A 393 DTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNTIQ 470 (615)
T ss_dssp TEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSCEE
T ss_pred CCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCeEE
Confidence 00000 00144566677777 778888888 88999
Q ss_pred EEeCCCCcee-eeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeec-ccccceEEEEecCCcEEEEEE
Q psy12697 506 IWDAASGQCE-QQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEG-HTTGQLVHSYKGTGGIFEVCW 582 (602)
Q Consensus 506 iwd~~~~~~~-~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~l~~ 582 (602)
+||+.+++.. ..+..|...|++++|+|++ +|++++.||.|++||+.+++++..+.+ |. ..|.+++|
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~-----------~~v~~~~~ 539 (615)
T 1pgu_A 471 VFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRT-----------SKINAISW 539 (615)
T ss_dssp EEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCS-----------SCEEEEEE
T ss_pred EEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCC-----------CceeEEEE
Confidence 9998887665 6777899999999999999 999999999999999998888777765 54 77999999
Q ss_pred CC----------CCCeEEEeccCCeEEee
Q psy12697 583 NS----------RGDKVGASASDGSVFKN 601 (602)
Q Consensus 583 sp----------dg~~l~~~~~dg~v~i~ 601 (602)
+| ++++|++++.||.|+|.
T Consensus 540 sp~~~~~~~~~~~~~~l~~~~~dg~i~iw 568 (615)
T 1pgu_A 540 KPAEKGANEEEIEEDLVATGSLDTNIFIY 568 (615)
T ss_dssp CCCC------CCSCCEEEEEETTSCEEEE
T ss_pred cCccccccccccCCCEEEEEcCCCcEEEE
Confidence 99 99999999999999874
No 11
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-47 Score=411.61 Aligned_cols=471 Identities=11% Similarity=0.067 Sum_probs=340.9
Q ss_pred CCcccCCcceeccceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEE
Q psy12697 108 GPAITNGEEVHRLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEV 187 (602)
Q Consensus 108 ~~~~~~~~~~~~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 187 (602)
+.+++.|. .+++|+|||..+++.+..+. |...|.+++|+| |++|++++.|++|+|||+.+++.+..+.....+..+
T Consensus 29 g~~lAsgs--~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v 104 (902)
T 2oaj_A 29 QNLLAIAT--VTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSI 104 (902)
T ss_dssp TTEEEEEE--TTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEE
T ss_pred CCEEEEEe--CCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEE
Confidence 34455543 35799999999888776654 889999999999 889999999999999999999999999888889999
Q ss_pred EeCCCCCCCCCCCCccccccccccCCcc------------eEeeCCCcceEEEEEcCCC-CEEEEeeCCCcEEEEeCCCC
Q psy12697 188 CWNSRGTPPNPPESMEVDASIEIPQSKA------------TKLIGHESEVFICAWNPVK-DFLASGSGDSTARIWDMTDS 254 (602)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~l~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iw~~~~~ 254 (602)
+|+|++..+...........+++..... ..+.+|...|.+++|+|++ ..|++++.||.| +||+.++
T Consensus 105 ~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~ 183 (902)
T 2oaj_A 105 DTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVEN 183 (902)
T ss_dssp ECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTT
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCC
Confidence 9999998876655444444444433221 2346799999999999964 789999999999 9999876
Q ss_pred CCCCCccceEEEEEEec--CC-----CcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-Ccceee--c---cc--
Q psy12697 255 TKKDPKELQIVLRHCIS--KG-----GTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKST--L---GQ-- 319 (602)
Q Consensus 255 ~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~--~---~~-- 319 (602)
+..... ..+... .. .....|...|.+++|+|+|++|++|+.||.|++||.+ ++.+.. + ..
T Consensus 184 ~~~~~~-----~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~ 258 (902)
T 2oaj_A 184 EIKQSF-----IYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINV 258 (902)
T ss_dssp EEEEEE-----CCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTS
T ss_pred ceEEEE-----ecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCC
Confidence 432110 000000 00 0112234679999999999999999999999999986 444332 2 11
Q ss_pred -----------ccCCeEEEEEcc----CC-CEEEEEecC-----------------------------------------
Q psy12697 320 -----------HKGPIFALKWNK----RG-NYILSAGVD----------------------------------------- 342 (602)
Q Consensus 320 -----------~~~~i~~~~~~~----~~-~~l~~~~~d----------------------------------------- 342 (602)
|...|.+++|++ ++ ..|++++.+
T Consensus 259 ~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 338 (902)
T 2oaj_A 259 PQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFP 338 (902)
T ss_dssp CCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEEC
T ss_pred CCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEe
Confidence 345788999953 32 344555333
Q ss_pred -----------------------------------CcEEEEeCCCCceeEE-----------------------------
Q psy12697 343 -----------------------------------KTTIIWDAASGQCEQQ----------------------------- 358 (602)
Q Consensus 343 -----------------------------------g~i~~wd~~~~~~~~~----------------------------- 358 (602)
|.|++||+.++.....
T Consensus 339 ~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~ 418 (902)
T 2oaj_A 339 LPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWL 418 (902)
T ss_dssp CSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHH
T ss_pred cCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHH
Confidence 3344444433321110
Q ss_pred ------------eeeccCCeeeeeccCC-CeEEEeeCCCeEEEEEcCCCcee----eE--ec-----cCCCCeEEEEECC
Q psy12697 359 ------------FSFHSAPALDVDWQSN-TSFASCSTDQHIHVCKLHSDKPV----KS--FE-----GHTNEVNAIKWDP 414 (602)
Q Consensus 359 ------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~i~d~~~~~~~----~~--~~-----~~~~~i~~~~~~~ 414 (602)
+.+|...+..++|+|+ ..+++|+.|++|++||+.++... .. +. +|...|.+++|+|
T Consensus 419 ~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafsp 498 (902)
T 2oaj_A 419 GALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAA 498 (902)
T ss_dssp HHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEET
T ss_pred HHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecC
Confidence 0011112233445565 45899999999999999887431 11 11 7889999999999
Q ss_pred CCCEEEEEECCCeEEEEeCCCC---------------------------------------------eeeEeeccccccE
Q psy12697 415 QGLLLASCSDDMTLKIWSLDKD---------------------------------------------NCVHDLQAHNKEI 449 (602)
Q Consensus 415 ~~~~l~~~~~dg~i~iwd~~~~---------------------------------------------~~~~~~~~~~~~i 449 (602)
++++||+|+.||+|+|||+.++ +++..+..|...|
T Consensus 499 dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V 578 (902)
T 2oaj_A 499 ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKT 578 (902)
T ss_dssp TTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSE
T ss_pred CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcE
Confidence 9999999999999999999765 2467788899999
Q ss_pred EEEEECCCCCCCCCCCcce-eeeee------------eccC-CccCCeEEEEEc-----cCC---CEEEEEeCCCeEEEE
Q psy12697 450 YTIKWSPTGPETSNPNMSL-IFILK------------STLG-QHKGPIFALKWN-----KRG---NYILSAGVDKTTIIW 507 (602)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~-~~~~~------------~~~~-~~~~~v~~i~~s-----~~~---~~l~s~~~dg~i~iw 507 (602)
++++|+|++ .++.+.... +..+. ..+. +|...|++++|+ ||| ++|++|+.|++|++|
T Consensus 579 ~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~w 657 (902)
T 2oaj_A 579 SAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITY 657 (902)
T ss_dssp EEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEE
T ss_pred EEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEE
Confidence 999999999 776554433 22221 1333 899999999999 885 899999999999999
Q ss_pred eC---CCCceeeeecccC-----CCeeEee-ec----------------------CCceEEEeeCCCcEEEeecCCCCce
Q psy12697 508 DA---ASGQCEQQFSFHS-----APALDVD-WQ----------------------SNTSFASCSTDQHIHVCKLHSDKPV 556 (602)
Q Consensus 508 d~---~~~~~~~~~~~~~-----~~v~~~~-~s----------------------~~~~l~~~~~d~~i~iw~~~~~~~~ 556 (602)
|+ .+|++...+.+|. ++|.+++ |+ +++.+++++ +..|+||++.++++.
T Consensus 658 d~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~-~~~ir~~~~~~~k~~ 736 (902)
T 2oaj_A 658 KILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG-FDDIRLITLGKSKST 736 (902)
T ss_dssp EEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC-SSEEEEECTTCCCEE
T ss_pred EEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe-ccceEEEeCccccce
Confidence 99 8899888888774 6777776 55 566444444 778999999998877
Q ss_pred eeeecccccceEEEEecCCcEEEE---E------ECCCCCeEEEeccCCeEEee
Q psy12697 557 KSFEGHTTGQLVHSYKGTGGIFEV---C------WNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~i~~l---~------~spdg~~l~~~~~dg~v~i~ 601 (602)
+..-.+. ..+.++ . |+++|..|++.+.||.|++.
T Consensus 737 ~k~~~~~-----------~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~ 779 (902)
T 2oaj_A 737 HKGFKYP-----------LAATGLSYISTVEKNNDRKNLTVIITLEINGHLRVF 779 (902)
T ss_dssp EEECSSC-----------EEEEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEE
T ss_pred eeEcccc-----------eeeeEEEEEEeccccccccCceEEEEEeCCCcEEEE
Confidence 6653332 223343 6 88999999999999999874
No 12
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.7e-46 Score=404.69 Aligned_cols=399 Identities=18% Similarity=0.271 Sum_probs=321.7
Q ss_pred eeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccc
Q psy12697 131 ECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEI 210 (602)
Q Consensus 131 ~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (602)
+..+.+.+|.+.|++++|+|++++||+++.||.|+|||+.+++.+.
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~---------------------------------- 49 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVR---------------------------------- 49 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE----------------------------------
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEE----------------------------------
Confidence 4567889999999999999999999999999999999999998774
Q ss_pred cCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC
Q psy12697 211 PQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN 290 (602)
Q Consensus 211 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 290 (602)
.+.+|...|.+++|+|++++|++++.||.|++||+.+++... . ...|...|++++|+|
T Consensus 50 ------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~-----~-----------~~~~~~~v~~~~~s~ 107 (814)
T 3mkq_A 50 ------SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV-----D-----------FEAHPDYIRSIAVHP 107 (814)
T ss_dssp ------EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE-----E-----------EECCSSCEEEEEECS
T ss_pred ------EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE-----E-----------EecCCCCEEEEEEeC
Confidence 345799999999999999999999999999999998765321 1 123568899999999
Q ss_pred CCCeEEEEeCCCeEEEEcCCC--cceeecccccCCeEEEEEcc-CCCEEEEEecCCcEEEEeCCCCceeEEeeecc-CCe
Q psy12697 291 NGSFLATGSYDGYARIWTSDG--SLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFHS-APA 366 (602)
Q Consensus 291 ~~~~l~~~~~dg~i~i~~~~~--~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-~~~ 366 (602)
++++|++++.||.|++|+... .....+..|...|.+++|+| +++.|++++.||.|++||+.++.....+..+. ..+
T Consensus 108 ~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v 187 (814)
T 3mkq_A 108 TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV 187 (814)
T ss_dssp SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCC
T ss_pred CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCE
Confidence 999999999999999999873 45667788999999999999 88999999999999999999888877776655 789
Q ss_pred eeeeccC--C-CeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeec
Q psy12697 367 LDVDWQS--N-TSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQ 443 (602)
Q Consensus 367 ~~~~~~~--~-~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 443 (602)
..+.|+| + ..+++++.+|.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+.
T Consensus 188 ~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp CEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred EEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee
Confidence 9999987 4 568899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccEEEEEECCCCCCC--CCCCcceeeee-------------------------------------------------
Q psy12697 444 AHNKEIYTIKWSPTGPET--SNPNMSLIFIL------------------------------------------------- 472 (602)
Q Consensus 444 ~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~------------------------------------------------- 472 (602)
.+...+.+++|+|++... +.........+
T Consensus 268 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (814)
T 3mkq_A 268 VGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSL 347 (814)
T ss_dssp CSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCC
T ss_pred cCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCcccee
Confidence 999999999999998632 21111111000
Q ss_pred -eeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee-----------------------------eeecccC
Q psy12697 473 -KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE-----------------------------QQFSFHS 522 (602)
Q Consensus 473 -~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~-----------------------------~~~~~~~ 522 (602)
......+...+.+++|+|+|+++++++ |+.+.+|++...... ..+.+|.
T Consensus 348 ~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~~~~~~~i~~~~~spdg~~la~~~~~g~v~l~~~~~~~~ 426 (814)
T 3mkq_A 348 QTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYKNFKEVT 426 (814)
T ss_dssp CCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEEEECSEEEECTTSSCEEEECTTCCEEEEETTEECT
T ss_pred eeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECccccccCCCceEEEEEeCCCCeEEEEeCCCcEEEEECCCCcc
Confidence 011133556788999999999999988 899999997543211 1122344
Q ss_pred CCeeEeeecCCc----eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEe------
Q psy12697 523 APALDVDWQSNT----SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGAS------ 592 (602)
Q Consensus 523 ~~v~~~~~s~~~----~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~------ 592 (602)
..+.+++|+|++ .|++++.|+.|++||+.+++.+..+..+. ..++|+|||++|+++
T Consensus 427 ~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~--------------~~v~~s~dg~~la~~~~~~~~ 492 (814)
T 3mkq_A 427 SWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNA--------------KDVIWSDNGELVMIVNTNSNG 492 (814)
T ss_dssp TCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESSCE--------------EEEEECTTSSEEEEEECCCSS
T ss_pred ceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEEecCC--------------CEEEEcCCCCEEEEEEcCccc
Confidence 455566666665 56666666666666665555554444332 289999999999999
Q ss_pred ccCCeEEe
Q psy12697 593 ASDGSVFK 600 (602)
Q Consensus 593 ~~dg~v~i 600 (602)
+.++.+.+
T Consensus 493 ~~~~~~~~ 500 (814)
T 3mkq_A 493 DEASGYTL 500 (814)
T ss_dssp CSCSEEEE
T ss_pred CCceEEEE
Confidence 66665544
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.6e-45 Score=354.48 Aligned_cols=294 Identities=22% Similarity=0.368 Sum_probs=260.6
Q ss_pred ceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcccccccc
Q psy12697 130 GECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIE 209 (602)
Q Consensus 130 ~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (602)
.+...++.+|.+.|++++|+||+++|++|+.|++|+|||+.+++.+..
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~-------------------------------- 92 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHA-------------------------------- 92 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEE--------------------------------
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceE--------------------------------
Confidence 456788999999999999999999999999999999999999887643
Q ss_pred ccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeC
Q psy12697 210 IPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWN 289 (602)
Q Consensus 210 ~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 289 (602)
+..|...|.+++|+|++++|++++.|+.+++|++.+....
T Consensus 93 --------~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~-------------------------------- 132 (340)
T 1got_B 93 --------IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN-------------------------------- 132 (340)
T ss_dssp --------EECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS--------------------------------
T ss_pred --------eecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc--------------------------------
Confidence 4568889999999999999999999999999998653210
Q ss_pred CCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeee
Q psy12697 290 NNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDV 369 (602)
Q Consensus 290 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~ 369 (602)
......+.+|...|.++.|++++. +++++.|+.|++||+++++....+..|...+.++
T Consensus 133 ---------------------~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~ 190 (340)
T 1got_B 133 ---------------------VRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSL 190 (340)
T ss_dssp ---------------------CEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred ---------------------ceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEE
Confidence 001123446888999999998865 8899999999999999999999999999999999
Q ss_pred eccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeecccccc
Q psy12697 370 DWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKE 448 (602)
Q Consensus 370 ~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 448 (602)
+|+|++ .+++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++|+.||.|++||+++++.+..+..+
T Consensus 191 ~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~--- 267 (340)
T 1got_B 191 SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD--- 267 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT---
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccC---
Confidence 999985 5889999999999999999999999999999999999999999999999999999999987766554311
Q ss_pred EEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEe
Q psy12697 449 IYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDV 528 (602)
Q Consensus 449 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 528 (602)
.+...|.+++|+|+|++|++|+.||.|++||+.+++.+..+.+|..+|.++
T Consensus 268 -----------------------------~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~ 318 (340)
T 1got_B 268 -----------------------------NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCL 318 (340)
T ss_dssp -----------------------------TCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred -----------------------------CcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEE
Confidence 134568889999999999999999999999999999999999999999999
Q ss_pred eecCCc-eEEEeeCCCcEEEee
Q psy12697 529 DWQSNT-SFASCSTDQHIHVCK 549 (602)
Q Consensus 529 ~~s~~~-~l~~~~~d~~i~iw~ 549 (602)
+|+|++ .|++|+.|+.|++||
T Consensus 319 ~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 319 GVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECTTSSCEEEEETTSCEEEEC
T ss_pred EEcCCCCEEEEEcCCccEEecC
Confidence 999999 999999999999997
No 14
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.6e-46 Score=365.68 Aligned_cols=318 Identities=21% Similarity=0.389 Sum_probs=272.7
Q ss_pred cceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCC
Q psy12697 120 LTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPP 199 (602)
Q Consensus 120 ~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (602)
..+..|+..+..+.++|.+|.+.|++++|+|++++|+||+.|++|+|||+.+++....
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~---------------------- 103 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHA---------------------- 103 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEE----------------------
T ss_pred ccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceE----------------------
Confidence 4566788889999999999999999999999999999999999999999999887743
Q ss_pred CCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCC
Q psy12697 200 ESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPS 279 (602)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (602)
+.+|...|.+++|+|++++|++++.|+.+++|++.+.....
T Consensus 104 ------------------~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~--------------------- 144 (380)
T 3iz6_a 104 ------------------IKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRD--------------------- 144 (380)
T ss_dssp ------------------EECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCC---------------------
T ss_pred ------------------EecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcccc---------------------
Confidence 45688999999999999999999999999999987542110
Q ss_pred CCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCC-CEEEEEecCCcEEEEeCCCCceeEE
Q psy12697 280 NKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRG-NYILSAGVDKTTIIWDAASGQCEQQ 358 (602)
Q Consensus 280 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~ 358 (602)
+ .......+.+|.+.|.++.|+|++ ..|++++.|++|++||+.+++.+..
T Consensus 145 ------------~-----------------~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~ 195 (380)
T 3iz6_a 145 ------------G-----------------NMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISI 195 (380)
T ss_dssp ------------C-----------------SSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEE
T ss_pred ------------C-----------------CccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEE
Confidence 0 011223456788899999999864 5799999999999999999998877
Q ss_pred e-----eeccCCeeeeeccC--CCeEEEeeCCCeEEEEEcC-CCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEE
Q psy12697 359 F-----SFHSAPALDVDWQS--NTSFASCSTDQHIHVCKLH-SDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKI 430 (602)
Q Consensus 359 ~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 430 (602)
+ ..|...+.++.+.+ ...+++|+.|+.|++||++ ..+.+..+.+|...|.+++|+|++++|++|+.||+|++
T Consensus 196 ~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~l 275 (380)
T 3iz6_a 196 FGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRL 275 (380)
T ss_dssp ECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEE
T ss_pred eecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEE
Confidence 6 56788899999876 3679999999999999998 55788899999999999999999999999999999999
Q ss_pred EeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCC
Q psy12697 431 WSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 510 (602)
Q Consensus 431 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~ 510 (602)
||+++++.+..+..+... ...+...|.+++|+|+|++|++|+.||.|++||+.
T Consensus 276 wd~~~~~~~~~~~~~~~~---------------------------~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 276 FDMRTGHQLQVYNREPDR---------------------------NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp EETTTTEEEEEECCCCSS---------------------------SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred EECCCCcEEEEecccccc---------------------------cccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 999999887766543211 11234568899999999999999999999999999
Q ss_pred CCceeeee----cccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCC
Q psy12697 511 SGQCEQQF----SFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDK 554 (602)
Q Consensus 511 ~~~~~~~~----~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~ 554 (602)
+++.+..+ .+|.+.|.+++|+|++ .|++|+.|+.|++|++...+
T Consensus 329 ~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 329 LAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp TCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred CCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 99888776 6799999999999999 99999999999999987654
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.7e-45 Score=352.06 Aligned_cols=296 Identities=25% Similarity=0.337 Sum_probs=260.8
Q ss_pred eeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccc
Q psy12697 131 ECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEI 210 (602)
Q Consensus 131 ~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (602)
+..+++.+|.+.|++++|+||+++||||+.|++|+|||..+++....
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~--------------------------------- 101 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHA--------------------------------- 101 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE---------------------------------
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceE---------------------------------
Confidence 56788999999999999999999999999999999999988877643
Q ss_pred cCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC
Q psy12697 211 PQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN 290 (602)
Q Consensus 211 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 290 (602)
+..|...|.+++|+|++.+|++++.|+.+++|++........
T Consensus 102 -------~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~------------------------------- 143 (354)
T 2pbi_B 102 -------VTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENM------------------------------- 143 (354)
T ss_dssp -------EECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCS-------------------------------
T ss_pred -------EecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccc-------------------------------
Confidence 345788899999999999999999999999999864321100
Q ss_pred CCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeee
Q psy12697 291 NGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVD 370 (602)
Q Consensus 291 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~ 370 (602)
......+..|...|.+++|+|+++.|++++.|++|++||+++++.+..+..|...+.++.
T Consensus 144 --------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~ 203 (354)
T 2pbi_B 144 --------------------AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLD 203 (354)
T ss_dssp --------------------GGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred --------------------cccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEE
Confidence 011223346888999999999999999999999999999999999999999999999998
Q ss_pred ccCC---CeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccc
Q psy12697 371 WQSN---TSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNK 447 (602)
Q Consensus 371 ~~~~---~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 447 (602)
+.++ ..+++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||++.++.+..+..+
T Consensus 204 ~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~-- 281 (354)
T 2pbi_B 204 LAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKE-- 281 (354)
T ss_dssp ECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT--
T ss_pred EEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC--
Confidence 8763 57999999999999999999999999999999999999999999999999999999999987665444321
Q ss_pred cEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeE
Q psy12697 448 EIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALD 527 (602)
Q Consensus 448 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 527 (602)
.+...+.+++|+|+|++|++|+.|+.|++||+.+++.+..+.+|...|++
T Consensus 282 ------------------------------~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~ 331 (354)
T 2pbi_B 282 ------------------------------SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVST 331 (354)
T ss_dssp ------------------------------TCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEE
T ss_pred ------------------------------CcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEE
Confidence 12346788899999999999999999999999999999999999999999
Q ss_pred eeecCCc-eEEEeeCCCcEEEee
Q psy12697 528 VDWQSNT-SFASCSTDQHIHVCK 549 (602)
Q Consensus 528 ~~~s~~~-~l~~~~~d~~i~iw~ 549 (602)
++|+||+ +|++|+.|+.|++|+
T Consensus 332 l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 332 LRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEECTTSSCEEEEETTSEEEEEC
T ss_pred EEECCCCCEEEEEcCCCCEEecC
Confidence 9999999 999999999999996
No 16
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.4e-45 Score=346.15 Aligned_cols=291 Identities=19% Similarity=0.291 Sum_probs=245.8
Q ss_pred eeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccc
Q psy12697 131 ECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEI 210 (602)
Q Consensus 131 ~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (602)
+..++|.+|.+.|++++|+|++++|++++.||+|++||+.+++.+..
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~--------------------------------- 50 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRS--------------------------------- 50 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE---------------------------------
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEE---------------------------------
Confidence 45678999999999999999999999999999999999999887743
Q ss_pred cCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC
Q psy12697 211 PQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN 290 (602)
Q Consensus 211 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 290 (602)
+.+|..+|.+++|+|++++|++++.|++|++||+.+++
T Consensus 51 -------~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~----------------------------------- 88 (304)
T 2ynn_A 51 -------IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE----------------------------------- 88 (304)
T ss_dssp -------EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC-----------------------------------
T ss_pred -------eeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc-----------------------------------
Confidence 45688889999999999999999999999999886542
Q ss_pred CCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeee
Q psy12697 291 NGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVD 370 (602)
Q Consensus 291 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~ 370 (602)
....+..|...|.+++|+|++++|++++.|++|++||++++..
T Consensus 89 ----------------------~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~--------------- 131 (304)
T 2ynn_A 89 ----------------------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA--------------- 131 (304)
T ss_dssp ----------------------EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE---------------
T ss_pred ----------------------EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc---------------
Confidence 1123446888899999999999999999999999999765421
Q ss_pred ccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECC-CCCEEEEEECCCeEEEEeCCCCeeeEeeccccccE
Q psy12697 371 WQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDP-QGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEI 449 (602)
Q Consensus 371 ~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i 449 (602)
....+.+|...|.+++|+| ++.+|++|+.|+.|++||+++......+..
T Consensus 132 -------------------------~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~----- 181 (304)
T 2ynn_A 132 -------------------------LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT----- 181 (304)
T ss_dssp -------------------------EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEEC-----
T ss_pred -------------------------hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceecc-----
Confidence 1244567889999999999 678999999999999999987665544432
Q ss_pred EEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEcc--CCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeE
Q psy12697 450 YTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNK--RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALD 527 (602)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 527 (602)
+|...+..+.|+| ++++|++++.|+.|++||+.+++++..+.+|...|.+
T Consensus 182 ----------------------------~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~ 233 (304)
T 2ynn_A 182 ----------------------------GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSF 233 (304)
T ss_dssp ----------------------------CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred ----------------------------CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEE
Confidence 1334555556654 7789999999999999999999999999999999999
Q ss_pred eeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCC--eEEEeccCCeEEeeC
Q psy12697 528 VDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGD--KVGASASDGSVFKNV 602 (602)
Q Consensus 528 ~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~--~l~~~~~dg~v~i~v 602 (602)
++|+|++ .|++++.||.|++||+.+++.+..+..+. ..+.+++|+|+++ ++|++++||.+.+.+
T Consensus 234 ~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~asg~~~g~~~~~~ 300 (304)
T 2ynn_A 234 AVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGL-----------ERSWCIATHPTGRKNYIASGFDNGFTVLSL 300 (304)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSS-----------SSEEEEEECTTCGGGCEEEEETTEEEEEEC
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCC-----------ccEEEEEECCCCCceEEEEecCCceEEEEe
Confidence 9999999 99999999999999999888888776654 6799999999985 699999999887764
No 17
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.9e-46 Score=369.32 Aligned_cols=348 Identities=25% Similarity=0.467 Sum_probs=282.6
Q ss_pred eCCCcceEEEEEcCCCC-EEEEeeCCCcEEEEeC----CCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCC
Q psy12697 219 IGHESEVFICAWNPVKD-FLASGSGDSTARIWDM----TDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGS 293 (602)
Q Consensus 219 ~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iw~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 293 (602)
..|...|.+++|+|+++ +|++++.||.|++|++ .++.............+..........|...|++++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 34678999999999999 9999999999999999 766532111111111111111111122467899999999999
Q ss_pred eEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCC--------
Q psy12697 294 FLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP-------- 365 (602)
Q Consensus 294 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~-------- 365 (602)
+|++++.||.|++|+..+.....+..|...|.+++|+|++++|++++.|+.|++||+.+++....+..+...
T Consensus 122 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 201 (425)
T 1r5m_A 122 SIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAEN 201 (425)
T ss_dssp EEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----------
T ss_pred EEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeecc
Confidence 999999999999999888889999999999999999999999999999999999999999999888877776
Q ss_pred -------eeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCee
Q psy12697 366 -------ALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNC 438 (602)
Q Consensus 366 -------~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 438 (602)
+.++.|.+++.+++++.++.|++||+.+++++..+..|...|.+++|+|++++|++++.||.|++||+++++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 281 (425)
T 1r5m_A 202 HSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS 281 (425)
T ss_dssp ----CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC
T ss_pred ccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998776
Q ss_pred eEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeee
Q psy12697 439 VHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF 518 (602)
Q Consensus 439 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 518 (602)
+..+.. |...|.+++|+|++ ++++++.||.|++||+.+++.+..+
T Consensus 282 ~~~~~~----------------------------------~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 282 QNCFYG----------------------------------HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp SEEECC----------------------------------CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEecC----------------------------------CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec
Confidence 665544 45566777777788 8999999999999999999999999
Q ss_pred cccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCc-eeeeeccc-------ccceEEEEecC--C-cEEEEEECCCC
Q psy12697 519 SFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKP-VKSFEGHT-------TGQLVHSYKGT--G-GIFEVCWNSRG 586 (602)
Q Consensus 519 ~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~-------~~~~~~~~~~~--~-~i~~l~~spdg 586 (602)
..|...+.+++|+|++ .|++++.||.|++||+.+++. ...+.+.. ....+..+..+ + .|.+++|+|++
T Consensus 327 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 406 (425)
T 1r5m_A 327 IVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAG 406 (425)
T ss_dssp ECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTS
T ss_pred ccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCC
Confidence 9999999999999999 999999999999999976651 11111000 01133444433 3 89999999999
Q ss_pred CeEEEeccCCeEEee
Q psy12697 587 DKVGASASDGSVFKN 601 (602)
Q Consensus 587 ~~l~~~~~dg~v~i~ 601 (602)
++|++++.||.|++.
T Consensus 407 ~~l~~~~~dg~i~iw 421 (425)
T 1r5m_A 407 NKISVAYSLQEGSVV 421 (425)
T ss_dssp SEEEEEESSSCCEEE
T ss_pred ceEEEEecCceEEEE
Confidence 999999999998874
No 18
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.2e-45 Score=349.56 Aligned_cols=294 Identities=23% Similarity=0.433 Sum_probs=256.4
Q ss_pred cceeeeeeeccCCceEEEEECCC----CCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccc
Q psy12697 129 RGECLNTLTRHTEPVYSVAFSPD----GKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEV 204 (602)
Q Consensus 129 ~~~~~~~l~~h~~~V~~~~~s~d----~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (602)
.+...+.+.+|.+.|++++|+|+ +++|+||+.|++|+|||+.+++....
T Consensus 21 ~g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~--------------------------- 73 (321)
T 3ow8_A 21 YGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQ--------------------------- 73 (321)
T ss_dssp CEEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEE---------------------------
T ss_pred hhheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeee---------------------------
Confidence 35566778899999999999985 67999999999999999987654321
Q ss_pred cccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCcee
Q psy12697 205 DASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVT 284 (602)
Q Consensus 205 ~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 284 (602)
..+.+|...|.+++|+|++.++++++.|++|++||+.+++... . ...+...+.
T Consensus 74 -----------~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~-----~-----------~~~~~~~~~ 126 (321)
T 3ow8_A 74 -----------WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIK-----S-----------IDAGPVDAW 126 (321)
T ss_dssp -----------EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-----E-----------EECCTTCCC
T ss_pred -----------eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEE-----E-----------EeCCCccEE
Confidence 3467899999999999999999999999999999998764321 0 112346788
Q ss_pred EEeeCCCCCeEEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeecc
Q psy12697 285 SLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS 363 (602)
Q Consensus 285 ~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 363 (602)
+++|+|++++|++|+.+|.|++|+++ +.....+..|...|.+++|+|++++|++++.||.|++||+++++.+..+..|.
T Consensus 127 ~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~ 206 (321)
T 3ow8_A 127 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 206 (321)
T ss_dssp CEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred EEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccC
Confidence 99999999999999999999999987 55666777888999999999999999999999999999999999999999999
Q ss_pred CCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEee
Q psy12697 364 APALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDL 442 (602)
Q Consensus 364 ~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 442 (602)
.++.+++|+|++ .+++++.|+.|++||+++++....+.+|...|.+++|+|++++|++++.|+.|++||+++++++.++
T Consensus 207 ~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 207 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 286 (321)
T ss_dssp SCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE
Confidence 999999999985 5888999999999999999999999999999999999999999999999999999999999888877
Q ss_pred ccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCC
Q psy12697 443 QAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 510 (602)
Q Consensus 443 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~ 510 (602)
..| ...|.+++|+|++++|++++.||.|++||..
T Consensus 287 ~~h----------------------------------~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 287 FDH----------------------------------QDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CCC----------------------------------SSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred cCC----------------------------------CCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 654 4556666677788999999999999999964
No 19
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-44 Score=357.61 Aligned_cols=299 Identities=23% Similarity=0.401 Sum_probs=268.1
Q ss_pred CCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCcee
Q psy12697 278 PSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE 356 (602)
Q Consensus 278 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 356 (602)
.|...|++++|+|++.+|++|+.||.|++||.. +.....+.+|...|.+++|+|++++|++++.|++|++||+.+++++
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~ 185 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI 185 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 356889999999999999999999999999976 6677888999999999999999999999999999999999999999
Q ss_pred EEeeeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCC
Q psy12697 357 QQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDK 435 (602)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 435 (602)
..+..|...+.++.|+|++ .+++++.|+.|++||+.++..+..+.+|...|.+++++|++++|++|+.|+.|++||+++
T Consensus 186 ~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 186 RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265 (410)
T ss_dssp ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 9999999999999999975 688999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee
Q psy12697 436 DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE 515 (602)
Q Consensus 436 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 515 (602)
+++...+..|...+.+++|+|+........ ..........++|.+|++|+.|+.|++||+.++.++
T Consensus 266 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 266 KECKAELREHRHVVECISWAPESSYSSISE--------------ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331 (410)
T ss_dssp CCEEEEECCCSSCEEEEEECCSCGGGGGGG--------------CCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred CceeeEecCCCceEEEEEEcCcccccchhh--------------hccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 999999999999999999999765321110 000111223346889999999999999999999999
Q ss_pred eeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEecc
Q psy12697 516 QQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASAS 594 (602)
Q Consensus 516 ~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~ 594 (602)
..+.+|...|.+++|+|++ +|++++.|+.|++||+.+++++..+.+|. ..|++++|+|++++|++|+.
T Consensus 332 ~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~-----------~~v~~l~~~~~~~~l~sgs~ 400 (410)
T 1vyh_C 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE-----------HFVTSLDFHKTAPYVVTGSV 400 (410)
T ss_dssp EEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCS-----------SCEEEEEECSSSSCEEEEET
T ss_pred EEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCC-----------CcEEEEEEcCCCCEEEEEeC
Confidence 9999999999999999999 99999999999999999998888888775 67999999999999999999
Q ss_pred CCeEEee
Q psy12697 595 DGSVFKN 601 (602)
Q Consensus 595 dg~v~i~ 601 (602)
||+|+|+
T Consensus 401 D~~i~vW 407 (410)
T 1vyh_C 401 DQTVKVW 407 (410)
T ss_dssp TSEEEEE
T ss_pred CCcEEEE
Confidence 9999985
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-44 Score=349.05 Aligned_cols=321 Identities=25% Similarity=0.406 Sum_probs=249.5
Q ss_pred cceeeeeeeccCC-ceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcccccc
Q psy12697 129 RGECLNTLTRHTE-PVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDAS 207 (602)
Q Consensus 129 ~~~~~~~l~~h~~-~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (602)
..+++.++.+|.. .|.+++|+|+|++||+|+.|++|+|||+.++......
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~----------------------------- 54 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKS----------------------------- 54 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEE-----------------------------
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeee-----------------------------
Confidence 3467889999988 9999999999999999999999999999887644221
Q ss_pred ccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEe
Q psy12697 208 IEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLD 287 (602)
Q Consensus 208 ~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 287 (602)
....+|...|.+++|+|++++|++++.|+++++|++..+... .. . ....|...|.+++
T Consensus 55 --------~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~------~~-~-------~~~~h~~~v~~v~ 112 (345)
T 3fm0_A 55 --------VLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFE------CV-T-------TLEGHENEVKSVA 112 (345)
T ss_dssp --------EECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EE------EE-E-------EECCCSSCEEEEE
T ss_pred --------eeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeE------EE-E-------EccCCCCCceEEE
Confidence 123579999999999999999999999999999998765311 00 0 1234678899999
Q ss_pred eCCCCCeEEEEeCCCeEEEEcCCCc----ceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeecc
Q psy12697 288 WNNNGSFLATGSYDGYARIWTSDGS----LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS 363 (602)
Q Consensus 288 ~~~~~~~l~~~~~dg~i~i~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 363 (602)
|+|++++|++|+.|+.|++||+... ....+..|...|.+++|+|++++|++++.|+.|++||.++++..
T Consensus 113 ~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~------- 185 (345)
T 3fm0_A 113 WAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV------- 185 (345)
T ss_dssp ECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE-------
T ss_pred EeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE-------
Confidence 9999999999999999999998632 34567789999999999999999999999999999997654211
Q ss_pred CCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeec
Q psy12697 364 APALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQ 443 (602)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 443 (602)
....+.+|...|.+++|+|++++|++++.|++|++||.........+.
T Consensus 186 --------------------------------~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~ 233 (345)
T 3fm0_A 186 --------------------------------CCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVA 233 (345)
T ss_dssp --------------------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCC
T ss_pred --------------------------------EEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccce
Confidence 124567899999999999999999999999999999964321110000
Q ss_pred cccccEEEEEECCCCCCCCCCCcceeeeeeeccC-CccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCce--------
Q psy12697 444 AHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLG-QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQC-------- 514 (602)
Q Consensus 444 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~-------- 514 (602)
. ........+...+. .|...|.+++|+|++.+|++++.|+.|++|+...+..
T Consensus 234 ~-------------------~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~ 294 (345)
T 3fm0_A 234 C-------------------SGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSL 294 (345)
T ss_dssp C-------------------C---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEE
T ss_pred e-------------------eccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEE
Confidence 0 00000111112222 3888999999999999999999999999999875431
Q ss_pred -eeeecccCCCeeEeeecCCc--eEEEeeCCCcEEEeecCCCCceee
Q psy12697 515 -EQQFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHSDKPVKS 558 (602)
Q Consensus 515 -~~~~~~~~~~v~~~~~s~~~--~l~~~~~d~~i~iw~~~~~~~~~~ 558 (602)
.....+|...|++++|+|++ .|++|+.||.|++|++.+++....
T Consensus 295 ~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 295 TAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp EEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred EeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 12345799999999999986 899999999999999987765443
No 21
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.1e-44 Score=341.64 Aligned_cols=279 Identities=20% Similarity=0.347 Sum_probs=253.4
Q ss_pred CCCCceeEEeeCCC----CCeEEEEeCCCeEEEEcCCCc---ceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeC
Q psy12697 278 PSNKDVTSLDWNNN----GSFLATGSYDGYARIWTSDGS---LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA 350 (602)
Q Consensus 278 ~~~~~i~~~~~~~~----~~~l~~~~~dg~i~i~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~ 350 (602)
.|...|.+++|+|+ +.+|++|+.|+.|++|+.... ....+.+|...|.+++|++++..+++++.|++|++||+
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~ 109 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDL 109 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 46889999999984 678999999999999997643 23467899999999999999999999999999999999
Q ss_pred CCCceeEEeeeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEE
Q psy12697 351 ASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLK 429 (602)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 429 (602)
.+++.+..+..+...+.+++|+|++ .+++++.++.|++|++.+++....+..|...|.+++|+|++++|++|+.||.|+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~ 189 (321)
T 3ow8_A 110 ENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 189 (321)
T ss_dssp TTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEE
Confidence 9999999999999999999999985 588889999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeC
Q psy12697 430 IWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA 509 (602)
Q Consensus 430 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~ 509 (602)
+||+++++.+..+.. |..+|.+++|+|++++|++++.|+.|++||+
T Consensus 190 iwd~~~~~~~~~~~~----------------------------------h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~ 235 (321)
T 3ow8_A 190 IFDIATGKLLHTLEG----------------------------------HAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 235 (321)
T ss_dssp EEETTTTEEEEEECC----------------------------------CSSCCCEEEECTTSCEEEEECTTSCEEEEET
T ss_pred EEECCCCcEEEEEcc----------------------------------cCCceeEEEEcCCCCEEEEEcCCCeEEEEEC
Confidence 999999888777654 4556777778888999999999999999999
Q ss_pred CCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCe
Q psy12697 510 ASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDK 588 (602)
Q Consensus 510 ~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~ 588 (602)
.++++...+.+|...|.+++|+|++ .|++++.|+.|++||+.+++++..+.+|. +.|.+++|+|+|++
T Consensus 236 ~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~-----------~~v~~v~~s~~g~~ 304 (321)
T 3ow8_A 236 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQ-----------DQVWGVKYNGNGSK 304 (321)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS-----------SCEEEEEECTTSSE
T ss_pred CCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCC-----------CcEEEEEECCCCCE
Confidence 9999999999999999999999999 99999999999999999988888887765 77999999999999
Q ss_pred EEEeccCCeEEee
Q psy12697 589 VGASASDGSVFKN 601 (602)
Q Consensus 589 l~~~~~dg~v~i~ 601 (602)
|++++.||.|+|.
T Consensus 305 l~s~~~d~~i~vw 317 (321)
T 3ow8_A 305 IVSVGDDQEIHIY 317 (321)
T ss_dssp EEEEETTCCEEEE
T ss_pred EEEEeCCCeEEEE
Confidence 9999999999874
No 22
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9e-45 Score=350.84 Aligned_cols=307 Identities=16% Similarity=0.279 Sum_probs=231.5
Q ss_pred cceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeC------CceEEEEecCCceeEEEeeccCceEEEEeCCCC
Q psy12697 120 LTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSF------DKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRG 193 (602)
Q Consensus 120 ~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (602)
.....|++.... ..+|...|++++|||||++||+++. |++|++|+..++.....+
T Consensus 26 ~~~~~w~~p~~~----p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~--------------- 86 (357)
T 4g56_B 26 SKGSAWGRPVTA----PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESL--------------- 86 (357)
T ss_dssp ------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGG---------------
T ss_pred ccccccCCCCCC----cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeE---------------
Confidence 345678765433 3579999999999999999999997 788999988776543211
Q ss_pred CCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCC
Q psy12697 194 TPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKG 273 (602)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 273 (602)
.....+|...|.+++|+|++. +++++.||+|++||+.+++.......
T Consensus 87 ---------------------~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~----------- 133 (357)
T 4g56_B 87 ---------------------CTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKF----------- 133 (357)
T ss_dssp ---------------------CSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCE-----------
T ss_pred ---------------------ecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEee-----------
Confidence 134457899999999999875 55678899999999988764322211
Q ss_pred CcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCC-EEEEEecCCcEEEEeCC
Q psy12697 274 GTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGN-YILSAGVDKTTIIWDAA 351 (602)
Q Consensus 274 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~wd~~ 351 (602)
....|...|++++|+|++++|++|+.||.|++||.+ +.....+..|...|.+++|+|+++ .+++++.||.|++||++
T Consensus 134 -~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~ 212 (357)
T 4g56_B 134 -AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTR 212 (357)
T ss_dssp -EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTT
T ss_pred -ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECC
Confidence 122467889999999999999999999999999987 667778889999999999999875 78899999999999998
Q ss_pred CCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCC-CCEEEEEECCCeEEE
Q psy12697 352 SGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQ-GLLLASCSDDMTLKI 430 (602)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i 430 (602)
+++....+ .+..|...+.+++|+|+ +.+|++|+.|+.|++
T Consensus 213 ~~~~~~~~---------------------------------------~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~ 253 (357)
T 4g56_B 213 KPKPATRI---------------------------------------DFCASDTIPTSVTWHPEKDDTFACGDETGNVSL 253 (357)
T ss_dssp SSSCBCBC---------------------------------------CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEE
T ss_pred CCceeeee---------------------------------------eeccccccccchhhhhcccceEEEeecccceeE
Confidence 76543322 12335667899999997 568999999999999
Q ss_pred EeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCC-CEEEEEeCCCeEEEEeC
Q psy12697 431 WSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRG-NYILSAGVDKTTIIWDA 509 (602)
Q Consensus 431 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~-~~l~s~~~dg~i~iwd~ 509 (602)
||+++++++..+..|... |++++|+|++ ++|++|+.|++|+|||+
T Consensus 254 wd~~~~~~~~~~~~~~~~----------------------------------v~~l~~sp~~~~~lasgs~D~~i~iwd~ 299 (357)
T 4g56_B 254 VNIKNPDSAQTSAVHSQN----------------------------------ITGLAYSYHSSPFLASISEDCTVAVLDA 299 (357)
T ss_dssp EESSCGGGCEEECCCSSC----------------------------------EEEEEECSSSSCCEEEEETTSCEEEECT
T ss_pred EECCCCcEeEEEecccee----------------------------------EEEEEEcCCCCCEEEEEeCCCEEEEEEC
Confidence 999998888777665554 4555555555 67999999999999999
Q ss_pred CCCceeeeecccCCCeeEeeecC-Cc-eEEEeeCCCcEEEeecCCC
Q psy12697 510 ASGQCEQQFSFHSAPALDVDWQS-NT-SFASCSTDQHIHVCKLHSD 553 (602)
Q Consensus 510 ~~~~~~~~~~~~~~~v~~~~~s~-~~-~l~~~~~d~~i~iw~~~~~ 553 (602)
++++++..+ +|.+.|++++|+| |+ +|++++.||+|++|++.+.
T Consensus 300 ~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 300 DFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp TSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 999887765 6999999999999 67 9999999999999998654
No 23
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-44 Score=357.78 Aligned_cols=349 Identities=14% Similarity=0.244 Sum_probs=281.7
Q ss_pred cceeeeecccceeeeeeeccCCceEEEEECCCCC-eEEEeeCCceEEEEec----CCcee------EEEeeccCceEEEE
Q psy12697 120 LTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGK-FLASGSFDKCVHIWSA----RTGQL------VHSYKGTGGIFEVC 188 (602)
Q Consensus 120 ~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~-~l~s~~~d~~v~iwd~----~~~~~------~~~~~~~~~~~~~~ 188 (602)
..+.+||++..........|.+.|++++|+|+++ +||+++.|+.|++||+ .+++. ...+...
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~------- 97 (425)
T 1r5m_A 25 SIDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHP------- 97 (425)
T ss_dssp ---------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECC-------
T ss_pred cccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccc-------
Confidence 4567888877766666667889999999999999 9999999999999999 88873 3332210
Q ss_pred eCCCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEE
Q psy12697 189 WNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRH 268 (602)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~ 268 (602)
........+|...|.+++|+|++++|++++.||.|++||. ++.. ..
T Consensus 98 -----------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~-~~~~-----~~----- 143 (425)
T 1r5m_A 98 -----------------------FALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNK-TGAL-----LN----- 143 (425)
T ss_dssp -----------------------CCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEET-TSCE-----EE-----
T ss_pred -----------------------ccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC-CCCe-----ee-----
Confidence 0000123457889999999999999999999999999993 2221 11
Q ss_pred EecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-CcceeecccccCC---------------eEEEEEccC
Q psy12697 269 CISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGP---------------IFALKWNKR 332 (602)
Q Consensus 269 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~---------------i~~~~~~~~ 332 (602)
....|...|.+++|+|++++|++++.||.|++||+. +.....+..+... +.+++|+|+
T Consensus 144 ------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (425)
T 1r5m_A 144 ------VLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD 217 (425)
T ss_dssp ------EECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET
T ss_pred ------eccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC
Confidence 112356889999999999999999999999999986 5566666666666 899999998
Q ss_pred CCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEE
Q psy12697 333 GNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIK 411 (602)
Q Consensus 333 ~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~ 411 (602)
+ .+++++.+|.|++||+.+++....+..+...+.+++|++++ .+++++.|+.|++||+.+++.+..+.+|...|.+++
T Consensus 218 ~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~ 296 (425)
T 1r5m_A 218 D-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSAS 296 (425)
T ss_dssp T-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEE
T ss_pred C-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEE
Confidence 5 58899999999999999999999999999999999999875 688899999999999999999999999999999999
Q ss_pred ECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccC
Q psy12697 412 WDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKR 491 (602)
Q Consensus 412 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~ 491 (602)
|+|++ ++++++.|+.|++||+++++.+..+.. |...|.+++|+|+
T Consensus 297 ~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~----------------------------------~~~~i~~~~~s~~ 341 (425)
T 1r5m_A 297 WVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV----------------------------------DGVPIFAGRISQD 341 (425)
T ss_dssp EETTT-EEEEEETTSEEEEEETTTTEEEEEEEC----------------------------------TTCCEEEEEECTT
T ss_pred ECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc----------------------------------CCccEEEEEEcCC
Confidence 99999 999999999999999999887776655 4455667777778
Q ss_pred CCEEEEEeCCCeEEEEeCCCCc--------------------eeeeecccCC--CeeEeeecCCc-eEEEeeCCCcEEEe
Q psy12697 492 GNYILSAGVDKTTIIWDAASGQ--------------------CEQQFSFHSA--PALDVDWQSNT-SFASCSTDQHIHVC 548 (602)
Q Consensus 492 ~~~l~s~~~dg~i~iwd~~~~~--------------------~~~~~~~~~~--~v~~~~~s~~~-~l~~~~~d~~i~iw 548 (602)
+++|++++.||.|++||+.+++ ++..+..|.. .|.+++|+|++ +|++++.||.|++|
T Consensus 342 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 421 (425)
T 1r5m_A 342 GQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVV 421 (425)
T ss_dssp SSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEE
T ss_pred CCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEE
Confidence 8999999999999999999988 8899999976 99999999999 99999999999999
Q ss_pred ecC
Q psy12697 549 KLH 551 (602)
Q Consensus 549 ~~~ 551 (602)
+++
T Consensus 422 ~~~ 424 (425)
T 1r5m_A 422 AIP 424 (425)
T ss_dssp ECC
T ss_pred eec
Confidence 974
No 24
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.7e-43 Score=340.30 Aligned_cols=279 Identities=17% Similarity=0.277 Sum_probs=252.3
Q ss_pred CCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCc--
Q psy12697 278 PSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ-- 354 (602)
Q Consensus 278 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-- 354 (602)
.|...|.+++|+|++++|++|+.||.|++||.. +.....+..|...|.+++|+|++++|++++.|+.+++||+.+.+
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~ 132 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN 132 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc
Confidence 467899999999999999999999999999975 66777788899999999999999999999999999999998763
Q ss_pred --eeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEe
Q psy12697 355 --CEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWS 432 (602)
Q Consensus 355 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 432 (602)
....+..|...+.++.|.+++.+++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|+.|++||
T Consensus 133 ~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd 212 (340)
T 1got_B 133 VRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212 (340)
T ss_dssp CEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 456677899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC
Q psy12697 433 LDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG 512 (602)
Q Consensus 433 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~ 512 (602)
++++.++..+.. |...|.+++|+|++++|++++.||.|++||+.++
T Consensus 213 ~~~~~~~~~~~~----------------------------------h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 213 VREGMCRQTFTG----------------------------------HESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp TTTCSEEEEECC----------------------------------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCCeeEEEEcC----------------------------------CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 998877766654 4556677777778899999999999999999998
Q ss_pred ceeeeecc--cCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeE
Q psy12697 513 QCEQQFSF--HSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKV 589 (602)
Q Consensus 513 ~~~~~~~~--~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l 589 (602)
+.+..+.. +...|.+++|+|++ .|++|+.|+.|++||+.+++.+..+.+|. +.|.+++|+|||++|
T Consensus 259 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~-----------~~v~~~~~s~dg~~l 327 (340)
T 1got_B 259 QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD-----------NRVSCLGVTDDGMAV 327 (340)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS-----------SCEEEEEECTTSSCE
T ss_pred cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCC-----------CcEEEEEEcCCCCEE
Confidence 88776653 33479999999999 99999999999999999988888887775 779999999999999
Q ss_pred EEeccCCeEEee
Q psy12697 590 GASASDGSVFKN 601 (602)
Q Consensus 590 ~~~~~dg~v~i~ 601 (602)
++|+.||.|+|+
T Consensus 328 ~s~s~D~~i~iW 339 (340)
T 1got_B 328 ATGSWDSFLKIW 339 (340)
T ss_dssp EEEETTSCEEEE
T ss_pred EEEcCCccEEec
Confidence 999999999985
No 25
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.9e-43 Score=336.55 Aligned_cols=304 Identities=24% Similarity=0.327 Sum_probs=258.7
Q ss_pred ceeeeeeeccCCceEEEEECCCC-CeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccc
Q psy12697 130 GECLNTLTRHTEPVYSVAFSPDG-KFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASI 208 (602)
Q Consensus 130 ~~~~~~l~~h~~~V~~~~~s~d~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (602)
..+..+|.+|.+.|++++|+|++ ++|+||+.|++|++|++.+......
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~------------------------------- 55 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFG------------------------------- 55 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEE-------------------------------
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcccc-------------------------------
Confidence 45667899999999999999965 8999999999999999865322110
Q ss_pred cccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEee
Q psy12697 209 EIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDW 288 (602)
Q Consensus 209 ~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 288 (602)
.....+.+|...|.+++|+|++++|++++.|++|++||+.+++.. . ....|...|.+++|
T Consensus 56 ----~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~-----~-----------~~~~h~~~v~~~~~ 115 (319)
T 3frx_A 56 ----VPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETY-----Q-----------RFVGHKSDVMSVDI 115 (319)
T ss_dssp ----EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-----E-----------EEECCSSCEEEEEE
T ss_pred ----ccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCee-----E-----------EEccCCCcEEEEEE
Confidence 011567789999999999999999999999999999999876431 1 11245788999999
Q ss_pred CCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccC------CCEEEEEecCCcEEEEeCCCCceeEEeeec
Q psy12697 289 NNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKR------GNYILSAGVDKTTIIWDAASGQCEQQFSFH 362 (602)
Q Consensus 289 ~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 362 (602)
+|++.+|++|+.|+.|++||+++.....+.+|...|.+++|+|. +..+++++.|+.|++||+++++....+..|
T Consensus 116 ~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h 195 (319)
T 3frx_A 116 DKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGH 195 (319)
T ss_dssp CTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCC
Confidence 99999999999999999999999989999999999999999985 448999999999999999999999999999
Q ss_pred cCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEe
Q psy12697 363 SAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHD 441 (602)
Q Consensus 363 ~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 441 (602)
...+.+++|+|++ .+++++.|+.|++||+.+++.+..+.. ...|.+++|+|++.+|++++.++ +++|++.....+..
T Consensus 196 ~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~~~ 273 (319)
T 3frx_A 196 NSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-QDEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDD 273 (319)
T ss_dssp CSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-CSCEEEEEECSSSSEEEEEETTE-EEEEEETTEEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCcEEEEEEcCCCCEEEEEcCCC-cEEEEeCcCeeeec
Confidence 9999999999985 588999999999999999999888875 46799999999999999988654 99999988766655
Q ss_pred eccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC
Q psy12697 442 LQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG 512 (602)
Q Consensus 442 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~ 512 (602)
+..+... ....|...+.+++|+|||++|++|+.||.|++||+.++
T Consensus 274 ~~~~~~~--------------------------~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 274 LRPEFAG--------------------------YSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp ECCCCTT--------------------------CCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred cCccccc--------------------------cccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 5432110 12236678899999999999999999999999998764
No 26
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.9e-43 Score=379.97 Aligned_cols=416 Identities=16% Similarity=0.196 Sum_probs=341.2
Q ss_pred CCCcccCCcceeccceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeec-cCceE
Q psy12697 107 TGPAITNGEEVHRLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKG-TGGIF 185 (602)
Q Consensus 107 ~~~~~~~~~~~~~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~~ 185 (602)
+++.++.+. .+++|+|||+.+++.+..+.+|...|++++|+|++++|++++.||.|+|||+.+++.+..+.. ...+.
T Consensus 24 ~~~~la~~~--~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~ 101 (814)
T 3mkq_A 24 TEPWVLTTL--YSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR 101 (814)
T ss_dssp SSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CCCEEEEEe--CCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEE
Confidence 344454443 467999999999999999999999999999999999999999999999999999999998885 46689
Q ss_pred EEEeCCCCCCCCCCCCccccccccccC--CcceEeeCCCcceEEEEEcC-CCCEEEEeeCCCcEEEEeCCCCCCCCCccc
Q psy12697 186 EVCWNSRGTPPNPPESMEVDASIEIPQ--SKATKLIGHESEVFICAWNP-VKDFLASGSGDSTARIWDMTDSTKKDPKEL 262 (602)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~ 262 (602)
.++|+|++..+...........+.+.. .....+.+|...|.+++|+| +++.|++++.||.|++||+.++......
T Consensus 102 ~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~-- 179 (814)
T 3mkq_A 102 SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL-- 179 (814)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEE--
T ss_pred EEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEE--
Confidence 999999998766544443333334332 34567789999999999999 7899999999999999999776542110
Q ss_pred eEEEEEEecCCCcccCCCCceeEEeeCC--CCCeEEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEE
Q psy12697 263 QIVLRHCISKGGTEVPSNKDVTSLDWNN--NGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSA 339 (602)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 339 (602)
...+...+.+++|+| ++.++++++.||.|++||.. +.....+..|...|.+++|+|++++|+++
T Consensus 180 -------------~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 246 (814)
T 3mkq_A 180 -------------TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISG 246 (814)
T ss_dssp -------------ECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEE
T ss_pred -------------ecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 112347899999999 99999999999999999976 56677788899999999999999999999
Q ss_pred ecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCe--EEEeeCCCeEEEEEcCCCceeeE------------------
Q psy12697 340 GVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS--FASCSTDQHIHVCKLHSDKPVKS------------------ 399 (602)
Q Consensus 340 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~i~d~~~~~~~~~------------------ 399 (602)
+.||.|++||+.+++....+..+...+.+++|+|++. +++++.++.+.+|++....+...
T Consensus 247 ~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 326 (814)
T 3mkq_A 247 SEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAAS 326 (814)
T ss_dssp ETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTT
T ss_pred eCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccce
Confidence 9999999999999999999999999999999999875 56667788888888765432211
Q ss_pred -------------------------eccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEE
Q psy12697 400 -------------------------FEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKW 454 (602)
Q Consensus 400 -------------------------~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~ 454 (602)
+..+...+.+++|+|+|+++++++ |+.+.+|++...... +.+.+.+++|
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~~~-----~~~~i~~~~~ 400 (814)
T 3mkq_A 327 DIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWRNK-----AFGKCQDFVW 400 (814)
T ss_dssp CEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTEEE-----EEEECSEEEE
T ss_pred eeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECcccccc-----CCCceEEEEE
Confidence 123445688999999999999998 899999998754432 2456779999
Q ss_pred CCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCC---CEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeec
Q psy12697 455 SPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRG---NYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQ 531 (602)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 531 (602)
+|++..++.........+...+.+|...+.++.|+|+| ++|++++.|+.|++||+.+++.+..+..|.. .++|+
T Consensus 401 spdg~~la~~~~~g~v~l~~~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~---~v~~s 477 (814)
T 3mkq_A 401 GPDSNSYALIDETGQIKYYKNFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAK---DVIWS 477 (814)
T ss_dssp CTTSSCEEEECTTCCEEEEETTEECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESSCEE---EEEEC
T ss_pred eCCCCeEEEEeCCCcEEEEECCCCccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEEecCCC---EEEEc
Confidence 99999877666555444456778899999999999998 6899999999999999999999999987764 89999
Q ss_pred CCc-eEEEe------eCCCcEEEe
Q psy12697 532 SNT-SFASC------STDQHIHVC 548 (602)
Q Consensus 532 ~~~-~l~~~------~~d~~i~iw 548 (602)
||| +++++ +.++.+.+|
T Consensus 478 ~dg~~la~~~~~~~~~~~~~~~~~ 501 (814)
T 3mkq_A 478 DNGELVMIVNTNSNGDEASGYTLL 501 (814)
T ss_dssp TTSSEEEEEECCCSSCSCSEEEEE
T ss_pred CCCCEEEEEEcCcccCCceEEEEE
Confidence 999 88888 555544444
No 27
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2e-43 Score=338.32 Aligned_cols=238 Identities=17% Similarity=0.268 Sum_probs=202.7
Q ss_pred CCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-Cccee----ecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCc
Q psy12697 280 NKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKS----TLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ 354 (602)
Q Consensus 280 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 354 (602)
...|.+++|+|++ .|++|+.||.|++||++ ++... ...+|...|.+++|+|++++|++++.|++|++||+++++
T Consensus 82 ~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~ 160 (344)
T 4gqb_B 82 EAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV 160 (344)
T ss_dssp SSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Confidence 4679999999985 68899999999999986 33322 345799999999999999999999999999999999999
Q ss_pred eeEEeeeccCCeeeeeccCCC--eEEEeeCCCeEEEEEcCCCceeeEec--cCCCCeEEEEECC-CCCEEEEEECCCeEE
Q psy12697 355 CEQQFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHSDKPVKSFE--GHTNEVNAIKWDP-QGLLLASCSDDMTLK 429 (602)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~-~~~~l~~~~~dg~i~ 429 (602)
++..+..|...|.++.|++++ .+++++.|+.|++||++++++...+. .|...+.+++|+| ++++|++|+.||.|+
T Consensus 161 ~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~ 240 (344)
T 4gqb_B 161 VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVS 240 (344)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEE
Confidence 999999999999999999874 58899999999999999999887764 4556799999999 567899999999999
Q ss_pred EEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCC-CEEEEEeCCCeEEEEe
Q psy12697 430 IWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRG-NYILSAGVDKTTIIWD 508 (602)
Q Consensus 430 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~-~~l~s~~~dg~i~iwd 508 (602)
+||+++++++.++..|... |++++|+|++ ++|++|+.|++|+|||
T Consensus 241 ~wd~~~~~~~~~~~~h~~~----------------------------------v~~v~fsp~g~~~lasgs~D~~i~vwd 286 (344)
T 4gqb_B 241 LVDTKSTSCVLSSAVHSQC----------------------------------VTGLVFSPHSVPFLASLSEDCSLAVLD 286 (344)
T ss_dssp EEESCC--CCEEEECCSSC----------------------------------EEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred EEECCCCcEEEEEcCCCCC----------------------------------EEEEEEccCCCeEEEEEeCCCeEEEEE
Confidence 9999999888877765554 5555555565 5799999999999999
Q ss_pred CCCCceeeeecccCCCeeEeeecCCc--eEEEeeCCCcEEEeecCCC
Q psy12697 509 AASGQCEQQFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHSD 553 (602)
Q Consensus 509 ~~~~~~~~~~~~~~~~v~~~~~s~~~--~l~~~~~d~~i~iw~~~~~ 553 (602)
+.+++++ .+.+|.+.|++++|+|++ .|++++.|++|++|++.+.
T Consensus 287 ~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 287 SSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp TTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 9988765 567899999999999998 5678999999999998764
No 28
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.5e-42 Score=328.58 Aligned_cols=295 Identities=31% Similarity=0.528 Sum_probs=251.5
Q ss_pred ceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcccccccc
Q psy12697 130 GECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIE 209 (602)
Q Consensus 130 ~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (602)
.....++.+|.+.|++++|+|++++|++++.|+.|++|++.+++...
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~--------------------------------- 59 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--------------------------------- 59 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE---------------------------------
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccch---------------------------------
Confidence 45667889999999999999999999999999999999999887663
Q ss_pred ccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeC
Q psy12697 210 IPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWN 289 (602)
Q Consensus 210 ~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 289 (602)
.+.+|...|.+++|+|++++|++++.|+.|++||+.+++.. .. ...|...|.+++|+
T Consensus 60 -------~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~-----~~-----------~~~~~~~v~~~~~~ 116 (312)
T 4ery_A 60 -------TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-----KT-----------LKGHSNYVFCCNFN 116 (312)
T ss_dssp -------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE-----EE-----------EECCSSCEEEEEEC
T ss_pred -------hhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEE-----EE-----------EcCCCCCEEEEEEc
Confidence 44579999999999999999999999999999999876432 11 12356789999999
Q ss_pred CCCCeEEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeee
Q psy12697 290 NNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALD 368 (602)
Q Consensus 290 ~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~ 368 (602)
|++++|++|+.||.|++||+. +.....+..|..+|.+++|+|++++|++++.||.|++||+++++.+..+.
T Consensus 117 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-------- 188 (312)
T 4ery_A 117 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI-------- 188 (312)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC--------
T ss_pred CCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEe--------
Confidence 999999999999999999987 56677888999999999999999999999999999999998765543221
Q ss_pred eeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeecccccc
Q psy12697 369 VDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKE 448 (602)
Q Consensus 369 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 448 (602)
..+...+..++|+|++++|++++.||.|++||+++++.+..+..|...
T Consensus 189 --------------------------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 236 (312)
T 4ery_A 189 --------------------------------DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE 236 (312)
T ss_dssp --------------------------------CSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCS
T ss_pred --------------------------------ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCc
Confidence 224556889999999999999999999999999999888877665432
Q ss_pred EEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEe
Q psy12697 449 IYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDV 528 (602)
Q Consensus 449 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 528 (602)
.. .+......+++++|++|+.||.|++||+.+++.+..+.+|...|.++
T Consensus 237 ~~-------------------------------~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 285 (312)
T 4ery_A 237 KY-------------------------------CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 285 (312)
T ss_dssp SS-------------------------------CCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred eE-------------------------------EEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEE
Confidence 11 11222233578899999999999999999999999999999999999
Q ss_pred eecCCc-eEEEee--CCCcEEEeecC
Q psy12697 529 DWQSNT-SFASCS--TDQHIHVCKLH 551 (602)
Q Consensus 529 ~~s~~~-~l~~~~--~d~~i~iw~~~ 551 (602)
+|+|++ .+++++ .|+.|++|+.+
T Consensus 286 ~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 286 ACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EECSSSSEEEEEECTTTCCEEEEECC
T ss_pred eecCcCCceEEEEccCCccEEEecCC
Confidence 999999 888886 69999999853
No 29
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.8e-42 Score=332.62 Aligned_cols=323 Identities=17% Similarity=0.272 Sum_probs=276.5
Q ss_pred cCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEe
Q psy12697 139 HTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKL 218 (602)
Q Consensus 139 h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 218 (602)
|.++|.+++|+|||++++++..++.+.+|+....... ...
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~ 47 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQ----------------------------------------INT 47 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEE----------------------------------------EEE
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCcccc----------------------------------------cee
Confidence 5678999999999999999988777777655443322 233
Q ss_pred eCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEE
Q psy12697 219 IGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATG 298 (602)
Q Consensus 219 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 298 (602)
.+|...|.+++|+|++++|++++ ||.|++|++.++......... ....+...|.+++|+|++++++++
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~-----------~~~~~~~~v~~~~~~~~~~~l~~~ 115 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQL-----------DCLNRDNYIRSCKLLPDGCTLIVG 115 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEE-----------ECSCTTSBEEEEEECTTSSEEEEE
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecc-----------cccCCCCcEEEEEEcCCCCEEEEE
Confidence 47999999999999999999999 999999999876543222111 011356889999999999999999
Q ss_pred eCCCeEEEEcCCCc---ceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCC
Q psy12697 299 SYDGYARIWTSDGS---LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT 375 (602)
Q Consensus 299 ~~dg~i~i~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (602)
+.||.|++|+.... ....+..|...|.+++|+|+++++++++.||.|++||+++++....+..+...+.++.|+|++
T Consensus 116 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 195 (337)
T 1gxr_A 116 GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDG 195 (337)
T ss_dssp ESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred cCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCC
Confidence 99999999998743 455677899999999999999999999999999999999999999999999999999999875
Q ss_pred -eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEE
Q psy12697 376 -SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKW 454 (602)
Q Consensus 376 -~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~ 454 (602)
.+++++.|+.|++||+++++.+..+. +...+.+++|+|++++|++++.|+.|++||+++++.. .+
T Consensus 196 ~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~------------ 261 (337)
T 1gxr_A 196 TKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QL------------ 261 (337)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EE------------
T ss_pred CEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EE------------
Confidence 68889999999999999998887765 7788999999999999999999999999999876532 22
Q ss_pred CCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCCc
Q psy12697 455 SPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT 534 (602)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~ 534 (602)
..|...|.+++|+|++++|++++.||.|++||+.+++.+... .|...+.+++|+|++
T Consensus 262 ----------------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~ 318 (337)
T 1gxr_A 262 ----------------------HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDD 318 (337)
T ss_dssp ----------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTS
T ss_pred ----------------------cCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCC
Confidence 236677888888889999999999999999999999888554 488899999999999
Q ss_pred -eEEEeeCCCcEEEeec
Q psy12697 535 -SFASCSTDQHIHVCKL 550 (602)
Q Consensus 535 -~l~~~~~d~~i~iw~~ 550 (602)
.|++++.||.|++|++
T Consensus 319 ~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 319 KYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CEEEEEETTSCEEEEEE
T ss_pred CEEEEecCCCeEEEEEE
Confidence 9999999999999996
No 30
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-44 Score=356.83 Aligned_cols=330 Identities=16% Similarity=0.295 Sum_probs=274.0
Q ss_pred CCceEEEEECCCCC-eEEEe----------eCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccc
Q psy12697 140 TEPVYSVAFSPDGK-FLASG----------SFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASI 208 (602)
Q Consensus 140 ~~~V~~~~~s~d~~-~l~s~----------~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (602)
...|.+++|+|+++ +|+++ +.|+.|+|||+.+++....
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~------------------------------- 60 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP------------------------------- 60 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSC-------------------------------
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcE-------------------------------
Confidence 34688999999997 99999 8999999999988753210
Q ss_pred cccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEee
Q psy12697 209 EIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDW 288 (602)
Q Consensus 209 ~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 288 (602)
.....|...|.+++|+|++++|++++.||.|++|++........ ... ....|...|.+++|
T Consensus 61 -------~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~-~~~-----------~~~~h~~~v~~~~~ 121 (416)
T 2pm9_A 61 -------IASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAIN-SMA-----------RFSNHSSSVKTVKF 121 (416)
T ss_dssp -------SCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCC-EEE-----------ECCCSSSCCCEEEE
T ss_pred -------EEEEecCCceEEEEECCCCCeEEEEccCCeEEEeeccccccccc-chh-----------hccCCccceEEEEE
Confidence 11235888999999999999999999999999999987322110 000 12245788999999
Q ss_pred CCC-CCeEEEEeCCCeEEEEcCCCcc-------e---eecccccCCeEEEEEccC-CCEEEEEecCCcEEEEeCCCCcee
Q psy12697 289 NNN-GSFLATGSYDGYARIWTSDGSL-------K---STLGQHKGPIFALKWNKR-GNYILSAGVDKTTIIWDAASGQCE 356 (602)
Q Consensus 289 ~~~-~~~l~~~~~dg~i~i~~~~~~~-------~---~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~ 356 (602)
+|+ +++|++++.||.|++||+.... . .....|...|.+++|+|+ +.+|++++.||.|++||+++++..
T Consensus 122 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 201 (416)
T 2pm9_A 122 NAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEV 201 (416)
T ss_dssp CSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEE
T ss_pred cCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcc
Confidence 998 8999999999999999987432 1 223578999999999999 789999999999999999999998
Q ss_pred EEeeec------cCCeeeeeccCCC--eEEEeeCCC---eEEEEEcCCC-ceeeEec-cCCCCeEEEEECC-CCCEEEEE
Q psy12697 357 QQFSFH------SAPALDVDWQSNT--SFASCSTDQ---HIHVCKLHSD-KPVKSFE-GHTNEVNAIKWDP-QGLLLASC 422 (602)
Q Consensus 357 ~~~~~~------~~~~~~~~~~~~~--~~~~~~~~~---~i~i~d~~~~-~~~~~~~-~~~~~i~~~~~~~-~~~~l~~~ 422 (602)
..+..+ ...+.+++|+|++ .+++++.++ .|++||++++ +++..+. +|...|.+++|+| ++++|+++
T Consensus 202 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~ 281 (416)
T 2pm9_A 202 IHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSS 281 (416)
T ss_dssp EEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEE
T ss_pred eEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEE
Confidence 888876 7889999999985 688999998 9999999986 6777888 8999999999999 99999999
Q ss_pred ECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCC-CEEEEEeCC
Q psy12697 423 SDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRG-NYILSAGVD 501 (602)
Q Consensus 423 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~-~~l~s~~~d 501 (602)
+.||.|++||+++++.+..+.. |...|.+++|+|++ ++|++++.|
T Consensus 282 ~~dg~v~~wd~~~~~~~~~~~~----------------------------------~~~~v~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 282 GRDNTVLLWNPESAEQLSQFPA----------------------------------RGNWCFKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp ESSSEEEEECSSSCCEEEEEEC----------------------------------SSSCCCCEEECTTCTTEEEECCSS
T ss_pred eCCCCEEEeeCCCCccceeecC----------------------------------CCCceEEEEECCCCCCEEEEEecC
Confidence 9999999999999888777665 44556667777777 799999999
Q ss_pred CeEEEEeCCCCceeeeecc-----------------------------------cCCCeeEeeecCCc-eEEEeeCCCcE
Q psy12697 502 KTTIIWDAASGQCEQQFSF-----------------------------------HSAPALDVDWQSNT-SFASCSTDQHI 545 (602)
Q Consensus 502 g~i~iwd~~~~~~~~~~~~-----------------------------------~~~~v~~~~~s~~~-~l~~~~~d~~i 545 (602)
|.|++||+.++........ |..++.+++|+|+| +|++++.|+.|
T Consensus 328 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v 407 (416)
T 2pm9_A 328 NKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGV 407 (416)
T ss_dssp SEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCB
T ss_pred CcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeE
Confidence 9999999987764433211 56778899999999 99999999999
Q ss_pred EEeecCCC
Q psy12697 546 HVCKLHSD 553 (602)
Q Consensus 546 ~iw~~~~~ 553 (602)
+||++.+.
T Consensus 408 ~~w~~~~~ 415 (416)
T 2pm9_A 408 SITNPKIS 415 (416)
T ss_dssp CCBCCCCC
T ss_pred EEEEeccC
Confidence 99998653
No 31
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.7e-42 Score=330.00 Aligned_cols=289 Identities=21% Similarity=0.354 Sum_probs=248.0
Q ss_pred eEeeCCCcceEEEEEcCCC-CEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 216 TKLIGHESEVFICAWNPVK-DFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 216 ~~l~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
..+.+|.+.|.+++|+|++ ++|++++.|++|++|++....... .... .....|...|.+++|+|++++
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~----~~~~-------~~~~~h~~~v~~~~~s~dg~~ 79 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKF----GVPV-------RSFKGHSHIVQDCTLTADGAY 79 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEE----EEEE-------EEEECCSSCEEEEEECTTSSE
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccc----cccc-------eEEeCCcccEEEEEECCCCCE
Confidence 5678999999999999965 899999999999999986543211 0000 012346789999999999999
Q ss_pred EEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccC
Q psy12697 295 LATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQS 373 (602)
Q Consensus 295 l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 373 (602)
|++|+.|+.|++||+. ++....+.+|...|.+++|+|++++|++++.|++|++||++ +.++..+..|...+.++.+.|
T Consensus 80 l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~ 158 (319)
T 3frx_A 80 ALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVP 158 (319)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECC
T ss_pred EEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEcc
Confidence 9999999999999986 66777888999999999999999999999999999999996 567778888999999999988
Q ss_pred CC-------eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeecccc
Q psy12697 374 NT-------SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHN 446 (602)
Q Consensus 374 ~~-------~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 446 (602)
.. .+++++.|+.|++||+++.+....+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+..
T Consensus 159 ~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-- 236 (319)
T 3frx_A 159 NEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-- 236 (319)
T ss_dssp C------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC--
T ss_pred CCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC--
Confidence 53 589999999999999999999999999999999999999999999999999999999999887776643
Q ss_pred ccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec-------
Q psy12697 447 KEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS------- 519 (602)
Q Consensus 447 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------- 519 (602)
...|.+++|+|++.+|++++.++ +++|++..+..+..+.
T Consensus 237 ---------------------------------~~~v~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~~~~~~~~~~~~ 282 (319)
T 3frx_A 237 ---------------------------------QDEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPEFAGYS 282 (319)
T ss_dssp ---------------------------------CSCEEEEEECSSSSEEEEEETTE-EEEEEETTEEEEEEECCCCTTCC
T ss_pred ---------------------------------CCcEEEEEEcCCCCEEEEEcCCC-cEEEEeCcCeeeeccCccccccc
Confidence 23567778888888998887655 9999999877666553
Q ss_pred -ccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCC
Q psy12697 520 -FHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHS 552 (602)
Q Consensus 520 -~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~ 552 (602)
.|...+.+++|+||| +|++|+.||.|++||+.+
T Consensus 283 ~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 283 KAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp GGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred cCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 346679999999999 999999999999999754
No 32
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.1e-42 Score=333.28 Aligned_cols=305 Identities=20% Similarity=0.245 Sum_probs=233.9
Q ss_pred ceeeeeeeccCCceEEEEE-----CC-CCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcc
Q psy12697 130 GECLNTLTRHTEPVYSVAF-----SP-DGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESME 203 (602)
Q Consensus 130 ~~~~~~l~~h~~~V~~~~~-----s~-d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (602)
.++...|.+|.+.|++++| ++ |+++|+||+.|++|+|||+.+++....
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~-------------------------- 64 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY-------------------------- 64 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB--------------------------
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc--------------------------
Confidence 3567789999999999999 77 999999999999999999876432100
Q ss_pred ccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCce
Q psy12697 204 VDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDV 283 (602)
Q Consensus 204 ~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 283 (602)
.......+.+|...|.+++|+|++.++++++.|++|++||+.++... . ....|...|
T Consensus 65 -------~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~-----~-----------~~~~h~~~v 121 (343)
T 2xzm_R 65 -------FGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTY-----K-----------RFVGHQSEV 121 (343)
T ss_dssp -------SEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEE-----E-----------EEECCCSCE
T ss_pred -------cccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE-----E-----------EEcCCCCcE
Confidence 00012457789999999999999999999999999999999876431 1 112357889
Q ss_pred eEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecc---cccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEee
Q psy12697 284 TSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLG---QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS 360 (602)
Q Consensus 284 ~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 360 (602)
.+++|+|++++|++++.|+.|++||+.+....... .|...|.+++|+|++....
T Consensus 122 ~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----------------------- 178 (343)
T 2xzm_R 122 YSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSAN----------------------- 178 (343)
T ss_dssp EEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCS-----------------------
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecccccccc-----------------------
Confidence 99999999999999999999999998865554443 7888999999999862100
Q ss_pred eccCCeeeeeccC-CCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCe-e
Q psy12697 361 FHSAPALDVDWQS-NTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDN-C 438 (602)
Q Consensus 361 ~~~~~~~~~~~~~-~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~ 438 (602)
...+ ...+++++.|+.|++|| ...+....+.+|...|.+++|+|+|++|++|+.||.|++||+.... .
T Consensus 179 ---------~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~ 248 (343)
T 2xzm_R 179 ---------KVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP 248 (343)
T ss_dssp ---------CCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC
T ss_pred ---------ccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccc
Confidence 0001 12345555555555555 2334456677899999999999999999999999999999985432 2
Q ss_pred eEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceee--
Q psy12697 439 VHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQ-- 516 (602)
Q Consensus 439 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~-- 516 (602)
...+. +...|.+++|+|++++++++ .|+.|++||+.+++...
T Consensus 249 ~~~~~-----------------------------------~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~ 292 (343)
T 2xzm_R 249 QREFD-----------------------------------AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVC 292 (343)
T ss_dssp SEEEE-----------------------------------CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEE
T ss_pred ceeec-----------------------------------CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceE
Confidence 21111 23457788888888877655 57889999998876543
Q ss_pred eec-----------ccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCC
Q psy12697 517 QFS-----------FHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHS 552 (602)
Q Consensus 517 ~~~-----------~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~ 552 (602)
.+. +|...|.+++|+|++ .|++|+.||.|++|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 293 TIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp ECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred EeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 333 678889999999999 999999999999999754
No 33
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.5e-42 Score=339.03 Aligned_cols=321 Identities=24% Similarity=0.378 Sum_probs=245.1
Q ss_pred eccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcce
Q psy12697 137 TRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKAT 216 (602)
Q Consensus 137 ~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (602)
.+|...|.+++|||||++||+|+ +++++||++.+++.+..+........ .+ ......
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~---~~-------------------~~~~~~ 117 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANK---DP-------------------ENLNTS 117 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC------------------------------------
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCcccccc---cc-------------------cccccc
Confidence 36999999999999999999986 78999999999998876653221000 00 000001
Q ss_pred EeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEE
Q psy12697 217 KLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLA 296 (602)
Q Consensus 217 ~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 296 (602)
....+...|.+++|+|++++|++++.|+.|++||+.+++.. . ....|...|.+++|+|++++|+
T Consensus 118 ~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~-----~-----------~~~~h~~~v~~~~~~p~~~~l~ 181 (393)
T 1erj_A 118 SSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIV-----M-----------ILQGHEQDIYSLDYFPSGDKLV 181 (393)
T ss_dssp ---CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-----E-----------EECCCSSCEEEEEECTTSSEEE
T ss_pred ccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE-----E-----------EEccCCCCEEEEEEcCCCCEEE
Confidence 11234556999999999999999999999999999865421 0 1124578899999999999999
Q ss_pred EEeCCCeEEEEcCCCcceeecccccCCeEEEEEcc-CCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCC
Q psy12697 297 TGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT 375 (602)
Q Consensus 297 ~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (602)
+++.|+.|++||+..........+...+.+++|+| ++++|++++.|+.|++||+++++.+..+...
T Consensus 182 s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~------------- 248 (393)
T 1erj_A 182 SGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE------------- 248 (393)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC---------------
T ss_pred EecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeeccc-------------
Confidence 99999999999987544333334677899999999 8999999999999999999988765543211
Q ss_pred eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEEC
Q psy12697 376 SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWS 455 (602)
Q Consensus 376 ~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~ 455 (602)
.....+|...|.+++|+|++++|++|+.|+.|++||+++............
T Consensus 249 ---------------------~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~-------- 299 (393)
T 1erj_A 249 ---------------------NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS-------- 299 (393)
T ss_dssp -------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------------------
T ss_pred ---------------------ccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCC--------
Confidence 112346889999999999999999999999999999986543322111000
Q ss_pred CCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecC---
Q psy12697 456 PTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQS--- 532 (602)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~--- 532 (602)
..+...+.+|...|.+++|+|++++|++|+.|+.|++||+.+++++..+.+|...|.+++|++
T Consensus 300 --------------~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~ 365 (393)
T 1erj_A 300 --------------GTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSS 365 (393)
T ss_dssp ---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCT
T ss_pred --------------CcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcC
Confidence 011223457889999999999999999999999999999999999999999999999999876
Q ss_pred ---Cc-eEEEeeCCCcEEEeecCC
Q psy12697 533 ---NT-SFASCSTDQHIHVCKLHS 552 (602)
Q Consensus 533 ---~~-~l~~~~~d~~i~iw~~~~ 552 (602)
++ .|++|+.||.|++|++..
T Consensus 366 ~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 366 LGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp TCTTCEEEEEEETTSEEEEEEEEE
T ss_pred cCCCCCEEEEECCCCcEEECcccc
Confidence 67 899999999999999753
No 34
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.4e-41 Score=328.37 Aligned_cols=279 Identities=17% Similarity=0.267 Sum_probs=247.8
Q ss_pred CCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCC---
Q psy12697 278 PSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG--- 353 (602)
Q Consensus 278 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~--- 353 (602)
.|...|.+++|+|++++|++|+.||.|++||.. +.....+..|...|.+++|+|+++++++++.|+.+++|++...
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~ 141 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNE 141 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTC
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccc
Confidence 467889999999999999999999999999965 5666777788899999999999999999999999999998654
Q ss_pred ---ceeEEeeeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECC--CCCEEEEEECCCe
Q psy12697 354 ---QCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDP--QGLLLASCSDDMT 427 (602)
Q Consensus 354 ---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~ 427 (602)
.....+..|...+.++.|++++ .+++++.|+.|++||+.+++.+..+.+|...|.+++|+| ++++|++|+.||.
T Consensus 142 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~ 221 (354)
T 2pbi_B 142 NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKK 221 (354)
T ss_dssp CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSC
T ss_pred cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCe
Confidence 3455677899999999999885 699999999999999999999999999999999999988 5789999999999
Q ss_pred EEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEE
Q psy12697 428 LKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIW 507 (602)
Q Consensus 428 i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iw 507 (602)
|++||+++++++..+.. |...|.+++|+|++++|++++.|++|++|
T Consensus 222 v~~wd~~~~~~~~~~~~----------------------------------h~~~v~~v~~~p~~~~l~s~s~D~~v~lw 267 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAFET----------------------------------HESDVNSVRYYPSGDAFASGSDDATCRLY 267 (354)
T ss_dssp EEEEETTTCCEEEEECC----------------------------------CSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEECCCCcEEEEecC----------------------------------CCCCeEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 99999999888776655 45566667777788999999999999999
Q ss_pred eCCCCceeeeeccc--CCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECC
Q psy12697 508 DAASGQCEQQFSFH--SAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNS 584 (602)
Q Consensus 508 d~~~~~~~~~~~~~--~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~sp 584 (602)
|+.+++.+..+..+ ...+.+++|+|++ .|++++.|+.|++||+.+++.+..+.+|. +.|.+++|+|
T Consensus 268 d~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~-----------~~v~~l~~sp 336 (354)
T 2pbi_B 268 DLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHE-----------NRVSTLRVSP 336 (354)
T ss_dssp ETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCS-----------SCEEEEEECT
T ss_pred ECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCC-----------CcEEEEEECC
Confidence 99988877766543 3478999999999 99999999999999999988888777775 7799999999
Q ss_pred CCCeEEEeccCCeEEee
Q psy12697 585 RGDKVGASASDGSVFKN 601 (602)
Q Consensus 585 dg~~l~~~~~dg~v~i~ 601 (602)
||++|++++.||+|+|+
T Consensus 337 dg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 337 DGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp TSSCEEEEETTSEEEEE
T ss_pred CCCEEEEEcCCCCEEec
Confidence 99999999999999985
No 35
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-41 Score=324.94 Aligned_cols=307 Identities=24% Similarity=0.422 Sum_probs=237.2
Q ss_pred cceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccc
Q psy12697 129 RGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASI 208 (602)
Q Consensus 129 ~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (602)
+.++++++.+|.++|.+++|+|+ +||+|+.|++|++||+.++.....
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~------------------------------- 49 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLI------------------------------- 49 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEE-------------------------------
T ss_pred ccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEE-------------------------------
Confidence 45678899999999999999998 999999999999999987532110
Q ss_pred cccCCcceEe-eC-CCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEE
Q psy12697 209 EIPQSKATKL-IG-HESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSL 286 (602)
Q Consensus 209 ~~~~~~~~~l-~~-h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 286 (602)
..+ .+ |...|.+++|+|++++|++++.|++|++|++...... .
T Consensus 50 -------~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~-----------------------~----- 94 (330)
T 2hes_X 50 -------DVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADR-----------------------T----- 94 (330)
T ss_dssp -------EEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-----------------------------------
T ss_pred -------EEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCc-----------------------c-----
Confidence 122 23 9999999999999999999999999999998532100 0
Q ss_pred eeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCC----ceeEEeeec
Q psy12697 287 DWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG----QCEQQFSFH 362 (602)
Q Consensus 287 ~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~----~~~~~~~~~ 362 (602)
........+.+|...|.+++|+|++++|++++.|++|++||++.. +++..+..|
T Consensus 95 ----------------------~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h 152 (330)
T 2hes_X 95 ----------------------FEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH 152 (330)
T ss_dssp ----------------------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC
T ss_pred ----------------------ccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC
Confidence 011233456679999999999999999999999999999999432 456778889
Q ss_pred cCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCC--ceeeEeccCCCCeEEEEECCC--CCEEEEEECCCeEEEEeCCCCe
Q psy12697 363 SAPALDVDWQSNT-SFASCSTDQHIHVCKLHSD--KPVKSFEGHTNEVNAIKWDPQ--GLLLASCSDDMTLKIWSLDKDN 437 (602)
Q Consensus 363 ~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~ 437 (602)
...+.++.|+|++ .+++++.|+.|++||..++ +++..+.+|...|.+++|+|+ +.+|++++.|++|++||++.+.
T Consensus 153 ~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~ 232 (330)
T 2hes_X 153 SQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDD 232 (330)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEEC
T ss_pred CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCC
Confidence 9999999999975 6889999999999999876 678889999999999999998 7799999999999999986432
Q ss_pred eeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccC-CccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCc--e
Q psy12697 438 CVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLG-QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ--C 514 (602)
Q Consensus 438 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~--~ 514 (602)
.. .. ........+. .|...|.+++|++++ +|++++.||.|++||..+++ .
T Consensus 233 ~~-----~~---------------------~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~ 285 (330)
T 2hes_X 233 ED-----DQ---------------------QEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKV 285 (330)
T ss_dssp TT-----SC---------------------EEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEE
T ss_pred cc-----cc---------------------ceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEE
Confidence 10 00 0001111222 377889999999665 89999999999999998774 3
Q ss_pred ee-eecccCC-CeeEeeecC--Cc-eEEEeeCCCcEEEeecCC
Q psy12697 515 EQ-QFSFHSA-PALDVDWQS--NT-SFASCSTDQHIHVCKLHS 552 (602)
Q Consensus 515 ~~-~~~~~~~-~v~~~~~s~--~~-~l~~~~~d~~i~iw~~~~ 552 (602)
.. ...+|.. .|.+++|+| ++ .|++++.||.|++|+++.
T Consensus 286 ~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 286 FAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 32 3456877 899999999 67 899999999999999753
No 36
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.8e-42 Score=333.34 Aligned_cols=307 Identities=16% Similarity=0.234 Sum_probs=230.6
Q ss_pred EEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeC------CC
Q psy12697 229 AWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSY------DG 302 (602)
Q Consensus 229 ~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------dg 302 (602)
.+.+++.+ +.++.+.....|++..... ..|...|++++|+|||++|++|+. |+
T Consensus 12 d~g~~~~~-~~~~g~~~~~~w~~p~~~p--------------------~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~ 70 (357)
T 4g56_B 12 DLGTENLY-FQSNGSSKGSAWGRPVTAP--------------------ACMEVQIGAVRYRRDGALLLAASSLSSRTWGG 70 (357)
T ss_dssp -------------------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCE
T ss_pred CCCccceE-EecCCCccccccCCCCCCc--------------------ccccCCEEEEEECCCCCEEEEEcCCCCccccC
Confidence 33444433 4445567778888753321 235788999999999999999997 78
Q ss_pred eEEEEcCCC-----cceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeE----EeeeccCCeeeeeccC
Q psy12697 303 YARIWTSDG-----SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQ----QFSFHSAPALDVDWQS 373 (602)
Q Consensus 303 ~i~i~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~----~~~~~~~~~~~~~~~~ 373 (602)
.|++|+... ........|...|.+++|+|++. +++++.||+|++||+.+++... ....|...|.+++|+|
T Consensus 71 ~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp 149 (357)
T 4g56_B 71 SIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS 149 (357)
T ss_dssp EEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECS
T ss_pred eEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC
Confidence 899998652 22333456888999999999975 6677889999999999886543 2346788999999999
Q ss_pred CC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCC-EEEEEECCCeEEEEeCCCCeeeEeeccccccEEE
Q psy12697 374 NT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGL-LLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYT 451 (602)
Q Consensus 374 ~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~ 451 (602)
++ .+++++.|+.|++||+.+++.+..+.+|...|.+++|+|++. ++++++.||.|++||++++++...+..
T Consensus 150 dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~------- 222 (357)
T 4g56_B 150 DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF------- 222 (357)
T ss_dssp SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC-------
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee-------
Confidence 85 588999999999999999999999999999999999999875 789999999999999998776554432
Q ss_pred EEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeee
Q psy12697 452 IKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKR-GNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDW 530 (602)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 530 (602)
..+...+.+++|+|+ +.+|++|+.|+.|++||+.+++++..+.+|...|++++|
T Consensus 223 -------------------------~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~ 277 (357)
T 4g56_B 223 -------------------------CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAY 277 (357)
T ss_dssp -------------------------TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEE
T ss_pred -------------------------ccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEE
Confidence 124556777777776 568999999999999999999999999999999999999
Q ss_pred cCCc--eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECC-CCCeEEEeccCCeEEee
Q psy12697 531 QSNT--SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNS-RGDKVGASASDGSVFKN 601 (602)
Q Consensus 531 s~~~--~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~sp-dg~~l~~~~~dg~v~i~ 601 (602)
+|++ +|++++.|++|+|||+++++.+..+ +| .+.|++++|+| |+++|++++.||+|+++
T Consensus 278 sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H-----------~~~V~~vafsP~d~~~l~s~s~Dg~v~iW 339 (357)
T 4g56_B 278 SYHSSPFLASISEDCTVAVLDADFSEVFRDL-SH-----------RDFVTGVAWSPLDHSKFTTVGWDHKVLHH 339 (357)
T ss_dssp CSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CC-----------SSCEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred cCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CC-----------CCCEEEEEEeCCCCCEEEEEcCCCeEEEE
Confidence 9987 6899999999999999877655443 33 47899999999 89999999999999885
No 37
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-43 Score=349.49 Aligned_cols=334 Identities=19% Similarity=0.366 Sum_probs=273.8
Q ss_pred CCcceEEEEEcCCCC-EEEEe----------eCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeC
Q psy12697 221 HESEVFICAWNPVKD-FLASG----------SGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWN 289 (602)
Q Consensus 221 h~~~v~~~~~~~~~~-~l~s~----------~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 289 (602)
+...|.+++|+|+++ +|+++ +.|+.|++||+.++...... ....+...|.+++|+
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~--------------~~~~~~~~v~~~~~s 76 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPI--------------ASLQVDSKFNDLDWS 76 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCS--------------CCCCCSSCEEEEEEC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEE--------------EEEecCCceEEEEEC
Confidence 445788999999986 99999 88999999999876532110 112356889999999
Q ss_pred CCCCeEEEEeCCCeEEEEcCCC-----cceeecccccCCeEEEEEccC-CCEEEEEecCCcEEEEeCCCCc------eeE
Q psy12697 290 NNGSFLATGSYDGYARIWTSDG-----SLKSTLGQHKGPIFALKWNKR-GNYILSAGVDKTTIIWDAASGQ------CEQ 357 (602)
Q Consensus 290 ~~~~~l~~~~~dg~i~i~~~~~-----~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~------~~~ 357 (602)
|++++|++++.||.|++|++.. .....+..|...|.+++|+|+ +++|++++.||.|++||+.+++ ...
T Consensus 77 ~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 156 (416)
T 2pm9_A 77 HNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPL 156 (416)
T ss_dssp SSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCB
T ss_pred CCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccc
Confidence 9999999999999999999875 467788899999999999998 8999999999999999999886 333
Q ss_pred E---eeeccCCeeeeeccCC--CeEEEeeCCCeEEEEEcCCCceeeEeccC------CCCeEEEEECCCC-CEEEEEECC
Q psy12697 358 Q---FSFHSAPALDVDWQSN--TSFASCSTDQHIHVCKLHSDKPVKSFEGH------TNEVNAIKWDPQG-LLLASCSDD 425 (602)
Q Consensus 358 ~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~-~~l~~~~~d 425 (602)
. ...+...+.++.|+++ ..+++++.|+.|++||+++++.+..+..+ ...|.+++|+|++ .+|++++.|
T Consensus 157 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 236 (416)
T 2pm9_A 157 TPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS 236 (416)
T ss_dssp CCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC
T ss_pred ccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECC
Confidence 2 3567889999999997 56889999999999999999998888876 7889999999997 689999999
Q ss_pred C---eEEEEeCCCC-eeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEcc-CCCEEEEEeC
Q psy12697 426 M---TLKIWSLDKD-NCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNK-RGNYILSAGV 500 (602)
Q Consensus 426 g---~i~iwd~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~ 500 (602)
+ .|++||++++ .++..+. .+|...|.+++|+| ++++|++++.
T Consensus 237 ~~~~~i~~~d~~~~~~~~~~~~---------------------------------~~~~~~v~~~~~s~~~~~~l~s~~~ 283 (416)
T 2pm9_A 237 DNDPSILIWDLRNANTPLQTLN---------------------------------QGHQKGILSLDWCHQDEHLLLSSGR 283 (416)
T ss_dssp SSSCCCCEEETTSTTSCSBCCC---------------------------------SCCSSCEEEEEECSSCSSCEEEEES
T ss_pred CCCceEEEEeCCCCCCCcEEee---------------------------------cCccCceeEEEeCCCCCCeEEEEeC
Confidence 8 9999999875 3333333 03666777788888 8899999999
Q ss_pred CCeEEEEeCCCCceeeeecccCCCeeEeeecCCc--eEEEeeCCCcEEEeecCCCCceeeeec---ccccceEE------
Q psy12697 501 DKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHSDKPVKSFEG---HTTGQLVH------ 569 (602)
Q Consensus 501 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~--~l~~~~~d~~i~iw~~~~~~~~~~~~~---~~~~~~~~------ 569 (602)
||.|++||+.+++++..+..|...|.+++|+|++ .|++++.|+.|++|++.+......... ........
T Consensus 284 dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (416)
T 2pm9_A 284 DNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVS 363 (416)
T ss_dssp SSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-------------------
T ss_pred CCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccc
Confidence 9999999999999999999999999999999997 899999999999999988765433221 00000000
Q ss_pred --------------EEe-cCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 570 --------------SYK-GTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 570 --------------~~~-~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
... ...++.+++|+|||++|++++.||.|+|+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w 410 (416)
T 2pm9_A 364 REESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSIT 410 (416)
T ss_dssp ---CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCB
T ss_pred ccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEE
Confidence 000 23567789999999999999999999874
No 38
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.8e-42 Score=327.19 Aligned_cols=277 Identities=17% Similarity=0.231 Sum_probs=227.9
Q ss_pred CCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC------------CcceeecccccCCeEEEEEccCCCEEEEEecCCcEE
Q psy12697 279 SNKDVTSLDWNNNGSFLATGSYDGYARIWTSD------------GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTI 346 (602)
Q Consensus 279 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 346 (602)
+...|.+++|+|||++|++++ |+.+++||.. .........+...|.+++|+|++ .|++++.||+|+
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~ 106 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVE 106 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEE
T ss_pred ccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEE
Confidence 356799999999999998877 6667777621 11112223466789999999985 688999999999
Q ss_pred EEeCCCCceeEEe----eeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCC-EEE
Q psy12697 347 IWDAASGQCEQQF----SFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGL-LLA 420 (602)
Q Consensus 347 ~wd~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~ 420 (602)
+||+.+++..... ..|...|.+++|+|++ .+++++.|+.|++||+.+++.+..+.+|...|.+++|+|++. +|+
T Consensus 107 lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~ 186 (344)
T 4gqb_B 107 LWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFL 186 (344)
T ss_dssp EEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEE
T ss_pred EEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCcee
Confidence 9999998765543 4688999999999985 588999999999999999999999999999999999999884 789
Q ss_pred EEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEcc-CCCEEEEEe
Q psy12697 421 SCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNK-RGNYILSAG 499 (602)
Q Consensus 421 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~ 499 (602)
+++.|+.|++||+++++....+..+ .+...+.+++|+| ++++|++|+
T Consensus 187 s~s~D~~v~iwd~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 187 SCSEDNRILLWDTRCPKPASQIGCS--------------------------------APGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp EEETTSCEEEEETTSSSCEEECC------------------------------------CCCEEEEEECSSCTTEEEEEE
T ss_pred eeccccccccccccccceeeeeecc--------------------------------eeeccceeeeecCCCCcceEEec
Confidence 9999999999999998877765422 1334566677776 457899999
Q ss_pred CCCeEEEEeCCCCceeeeecccCCCeeEeeecCCc--eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcE
Q psy12697 500 VDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGI 577 (602)
Q Consensus 500 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~--~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 577 (602)
.||.|++||+++++++..+.+|...|++++|+|++ +|++|+.|++|+|||+.+++.+ .+.+|. +.|
T Consensus 235 ~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~-----------~~V 302 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHR-----------DFV 302 (344)
T ss_dssp TTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCS-----------SCE
T ss_pred cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCC-----------CCE
Confidence 99999999999999999999999999999999998 6899999999999999877543 344454 789
Q ss_pred EEEEECCCCC-eEEEeccCCeEEee
Q psy12697 578 FEVCWNSRGD-KVGASASDGSVFKN 601 (602)
Q Consensus 578 ~~l~~spdg~-~l~~~~~dg~v~i~ 601 (602)
++++|+|+++ +|++++.||+|+++
T Consensus 303 ~~v~~sp~~~~llas~s~D~~v~~w 327 (344)
T 4gqb_B 303 RDATWSPLNHSLLTTVGWDHQVVHH 327 (344)
T ss_dssp EEEEECSSSTTEEEEEETTSCEEEE
T ss_pred EEEEEeCCCCeEEEEEcCCCeEEEE
Confidence 9999999987 56789999999875
No 39
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=328.08 Aligned_cols=296 Identities=26% Similarity=0.470 Sum_probs=236.1
Q ss_pred eEeeCCCc-ceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 216 TKLIGHES-EVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 216 ~~l~~h~~-~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
..+.+|.. .|++++|+|++++|++++.|++|++||+.++... .... ....|...|.+++|+|++++
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~--------~~~~-----~~~~h~~~v~~~~~sp~g~~ 75 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI--------CKSV-----LSEGHQRTVRKVAWSPCGNY 75 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE--------EEEE-----ECSSCSSCEEEEEECTTSSE
T ss_pred eeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce--------eeee-----eccccCCcEEEEEECCCCCE
Confidence 56778988 9999999999999999999999999998765311 0000 11246788999999999999
Q ss_pred EEEEeCCCeEEEEcCCCc---ceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeec
Q psy12697 295 LATGSYDGYARIWTSDGS---LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDW 371 (602)
Q Consensus 295 l~~~~~dg~i~i~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 371 (602)
|++|+.|+.+++|+.... ....+.+|...|.+++|+|++++|++++.|+.|++||+.++...
T Consensus 76 l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~--------------- 140 (345)
T 3fm0_A 76 LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEY--------------- 140 (345)
T ss_dssp EEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCE---------------
T ss_pred EEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCe---------------
Confidence 999999999999997643 45678899999999999999999999999999999998754321
Q ss_pred cCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEE
Q psy12697 372 QSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYT 451 (602)
Q Consensus 372 ~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~ 451 (602)
+.+..+.+|...|.+++|+|++++|++++.|+.|++||.++++....
T Consensus 141 -----------------------~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~---------- 187 (345)
T 3fm0_A 141 -----------------------ECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCC---------- 187 (345)
T ss_dssp -----------------------EEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEE----------
T ss_pred -----------------------EEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEE----------
Confidence 12345567889999999999999999999999999999876542211
Q ss_pred EEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC---------------ceee
Q psy12697 452 IKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG---------------QCEQ 516 (602)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~---------------~~~~ 516 (602)
..+.+|...|.+++|+|+|++|++++.|++|++||.... +++.
T Consensus 188 ----------------------~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
T 3fm0_A 188 ----------------------ATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCIC 245 (345)
T ss_dssp ----------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEE
T ss_pred ----------------------EEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeE
Confidence 123357778888888889999999999999999996322 2344
Q ss_pred eecc-cCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCc----eeeeecccccceEEEE-ecCCcEEEEEECCCC-Ce
Q psy12697 517 QFSF-HSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKP----VKSFEGHTTGQLVHSY-KGTGGIFEVCWNSRG-DK 588 (602)
Q Consensus 517 ~~~~-~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~i~~l~~spdg-~~ 588 (602)
.+.+ |...|.+++|+|++ .|++++.|+.|++|+...... ...+..+ .. .+...|.+++|+|++ .+
T Consensus 246 ~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~-------~~~~h~~~V~~v~~~p~~~~~ 318 (345)
T 3fm0_A 246 TLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAH-------LHQAHSQDVNCVAWNPKEPGL 318 (345)
T ss_dssp EECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEE-------ETTSSSSCEEEEEECSSSTTE
T ss_pred EecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEee-------ecccccCcEeEeEEeCCCceE
Confidence 4444 88899999999999 999999999999999876532 1111110 11 124779999999998 49
Q ss_pred EEEeccCCeEEee
Q psy12697 589 VGASASDGSVFKN 601 (602)
Q Consensus 589 l~~~~~dg~v~i~ 601 (602)
||+|+.||+|+++
T Consensus 319 laS~s~Dg~v~~W 331 (345)
T 3fm0_A 319 LASCSDDGEVAFW 331 (345)
T ss_dssp EEEEETTSCEEEE
T ss_pred EEEcCCCCcEEEE
Confidence 9999999999985
No 40
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.6e-41 Score=325.21 Aligned_cols=309 Identities=22% Similarity=0.341 Sum_probs=254.9
Q ss_pred cccceeeeeeeccCCceEEEEECCC-CCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcccc
Q psy12697 127 VERGECLNTLTRHTEPVYSVAFSPD-GKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVD 205 (602)
Q Consensus 127 ~~~~~~~~~l~~h~~~V~~~~~s~d-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (602)
.++.++..+|+||++.|++++|+|+ +++||||+.|++|+|||+.+++.....
T Consensus 25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~--------------------------- 77 (340)
T 4aow_A 25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGI--------------------------- 77 (340)
T ss_dssp -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEE---------------------------
T ss_pred CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccce---------------------------
Confidence 3455677899999999999999997 689999999999999999875432111
Q ss_pred ccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeE
Q psy12697 206 ASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTS 285 (602)
Q Consensus 206 ~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 285 (602)
....+.+|...|.+++|+|++++|++++.|+.|++|+........ ....+...+..
T Consensus 78 --------~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~----------------~~~~~~~~~~~ 133 (340)
T 4aow_A 78 --------PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR----------------RFVGHTKDVLS 133 (340)
T ss_dssp --------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE----------------EEECCSSCEEE
T ss_pred --------eeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceee----------------eecCCCCceeE
Confidence 115577899999999999999999999999999999987653211 11123567889
Q ss_pred EeeCCCCCeEEEEeCCCeEEEEcCCCcc--eeecccccCCeEEEEEccCC--CEEEEEecCCcEEEEeCCCCceeEEeee
Q psy12697 286 LDWNNNGSFLATGSYDGYARIWTSDGSL--KSTLGQHKGPIFALKWNKRG--NYILSAGVDKTTIIWDAASGQCEQQFSF 361 (602)
Q Consensus 286 ~~~~~~~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~i~~~~~~~~~--~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 361 (602)
+.+++++.+|++++.|+.+++||..... ......|...+..++|++++ .++++++.|+.|++||+++++....+..
T Consensus 134 ~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~ 213 (340)
T 4aow_A 134 VAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG 213 (340)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecC
Confidence 9999999999999999999999987543 34456789999999998865 5688999999999999999999999999
Q ss_pred ccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeE
Q psy12697 362 HSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVH 440 (602)
Q Consensus 362 ~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 440 (602)
|...+.+++|+|++ .+++++.|+.|++||+++.+++..+..+ ..|.+++|+|++.++ +++.|+.|++||++++..+.
T Consensus 214 h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~ 291 (340)
T 4aow_A 214 HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVD 291 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEE
Confidence 99999999999975 5888999999999999999998888754 679999999987654 56678999999999988777
Q ss_pred eeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCc
Q psy12697 441 DLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ 513 (602)
Q Consensus 441 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~ 513 (602)
.+..+... .....|...|++++|+|+|++|++|+.||.|+|||+++|.
T Consensus 292 ~~~~~~~~-------------------------~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 292 ELKQEVIS-------------------------TSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EECCC--------------------------------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ecccccee-------------------------eeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 76543211 1234588999999999999999999999999999999885
No 41
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8.9e-41 Score=334.61 Aligned_cols=329 Identities=22% Similarity=0.416 Sum_probs=281.9
Q ss_pred eecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccc
Q psy12697 125 WDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEV 204 (602)
Q Consensus 125 wd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (602)
|.....+....+.+|.+.|.. +++++|++|++|+.||+|++||+.+++.+.
T Consensus 103 w~~~~~~~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~---------------------------- 153 (445)
T 2ovr_B 103 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLR---------------------------- 153 (445)
T ss_dssp HHHSCCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEE----------------------------
T ss_pred ccCCCcceeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEE----------------------------
Confidence 444444566789999987643 355579999999999999999999998774
Q ss_pred cccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCcee
Q psy12697 205 DASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVT 284 (602)
Q Consensus 205 ~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 284 (602)
.+.+|...|.+++|+ ++++++++.||+|++||+.+++... ....|...|.
T Consensus 154 ------------~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~----------------~~~~h~~~v~ 203 (445)
T 2ovr_B 154 ------------TLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIH----------------TLYGHTSTVR 203 (445)
T ss_dssp ------------ECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEE----------------EECCCSSCEE
T ss_pred ------------EEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEE----------------EECCCCCcEE
Confidence 345799999999998 6799999999999999998764211 1123568899
Q ss_pred EEeeCCCCCeEEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeecc
Q psy12697 285 SLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS 363 (602)
Q Consensus 285 ~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 363 (602)
+++|+ ++.+++|+.||.|++||+. +.....+..|...|.+++| +++++++++.||.|++||+++++.+..+..|.
T Consensus 204 ~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 279 (445)
T 2ovr_B 204 CMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 279 (445)
T ss_dssp EEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCS
T ss_pred EEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCC
Confidence 99995 5689999999999999986 6677788899999999999 68899999999999999999999999999999
Q ss_pred CCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeec
Q psy12697 364 APALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQ 443 (602)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 443 (602)
..+.++.| .+..+++++.|+.|++||+.+++.+..+.+|...+.++.++ +++|++++.||.|++||+++++.+..+.
T Consensus 280 ~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 356 (445)
T 2ovr_B 280 NRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQ 356 (445)
T ss_dssp SCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 99999999 66789999999999999999999999999999999988875 6699999999999999999988887776
Q ss_pred cccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeee-----
Q psy12697 444 AHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF----- 518 (602)
Q Consensus 444 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----- 518 (602)
.+. .|...|.+++|+ +++|++++.||.|++||+.+++.+..+
T Consensus 357 ~~~-------------------------------~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 403 (445)
T 2ovr_B 357 GPN-------------------------------KHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLES 403 (445)
T ss_dssp STT-------------------------------SCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTT
T ss_pred cCC-------------------------------CCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeecccc
Confidence 421 255666667664 578999999999999999999998888
Q ss_pred cccCCCeeEeeecCCc-eEEEeeCCCc----EEEeecCC
Q psy12697 519 SFHSAPALDVDWQSNT-SFASCSTDQH----IHVCKLHS 552 (602)
Q Consensus 519 ~~~~~~v~~~~~s~~~-~l~~~~~d~~----i~iw~~~~ 552 (602)
..|.+.|.+++|+|++ .+++++.||. |.+||++.
T Consensus 404 ~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 404 GGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp GGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 4688899999999999 8999999998 99999864
No 42
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-40 Score=317.24 Aligned_cols=280 Identities=26% Similarity=0.486 Sum_probs=251.1
Q ss_pred CCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCcee
Q psy12697 278 PSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE 356 (602)
Q Consensus 278 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 356 (602)
.|...|++++|+|++++|++++.||.|++|+.. +.....+..|...|.+++|+|++++|++++.|+.|++||+++++++
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL 100 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEE
Confidence 467899999999999999999999999999975 6677788899999999999999999999999999999999999999
Q ss_pred EEeeeccCCeeeeeccCC-CeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCC
Q psy12697 357 QQFSFHSAPALDVDWQSN-TSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDK 435 (602)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 435 (602)
..+..|...+.++.|+|+ ..+++++.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.||.|++||+++
T Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 180 (312)
T 4ery_A 101 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 180 (312)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 999999999999999997 5688999999999999999999999999999999999999999999999999999999998
Q ss_pred CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee
Q psy12697 436 DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE 515 (602)
Q Consensus 436 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 515 (602)
++.+..+.. .+..++..++|+|++++|++++.||.|++||+.+++++
T Consensus 181 ~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 181 GQCLKTLID---------------------------------DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 227 (312)
T ss_dssp CCEEEEECC---------------------------------SSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE
T ss_pred CceeeEEec---------------------------------cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence 876655432 24456778888899999999999999999999999999
Q ss_pred eeecccCCCeeEe--eec-CCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEE
Q psy12697 516 QQFSFHSAPALDV--DWQ-SNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGA 591 (602)
Q Consensus 516 ~~~~~~~~~v~~~--~~s-~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~ 591 (602)
..+.+|......+ .++ +++ +|++++.||.|++||+.+++.+..+.+|. ..|.+++|+|++++|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-----------~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 228 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT-----------DVVISTACHPTENIIAS 296 (312)
T ss_dssp EEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCS-----------SCEEEEEECSSSSEEEE
T ss_pred EEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccC-----------CcEEEEeecCcCCceEE
Confidence 9998887754433 344 556 89999999999999999998888887775 77999999999999999
Q ss_pred ec--cCCeEEee
Q psy12697 592 SA--SDGSVFKN 601 (602)
Q Consensus 592 ~~--~dg~v~i~ 601 (602)
++ .||.|+++
T Consensus 297 ~~~~~d~~i~~W 308 (312)
T 4ery_A 297 AALENDKTIKLW 308 (312)
T ss_dssp EECTTTCCEEEE
T ss_pred EEccCCccEEEe
Confidence 87 69999875
No 43
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.1e-42 Score=342.96 Aligned_cols=347 Identities=15% Similarity=0.202 Sum_probs=272.5
Q ss_pred CceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeC
Q psy12697 141 EPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIG 220 (602)
Q Consensus 141 ~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 220 (602)
..+++++|+|++++|++++.|+.|++||+.+++.... +..
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~----------------------------------------~~~ 96 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKM----------------------------------------LKR 96 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTT----------------------------------------SCS
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeE----------------------------------------Eec
Confidence 3455899999999999999999999999987664321 122
Q ss_pred CCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeC
Q psy12697 221 HESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSY 300 (602)
Q Consensus 221 h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 300 (602)
| ..+....|+|++++|++++.||.|++||+.++.... ....|...|++++|+|++++|++|+.
T Consensus 97 ~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~----------------~~~~h~~~v~~~~~~~~~~~l~s~s~ 159 (420)
T 3vl1_A 97 A-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQRE----------------IDQAHVSEITKLKFFPSGEALISSSQ 159 (420)
T ss_dssp C-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEE----------------ETTSSSSCEEEEEECTTSSEEEEEET
T ss_pred C-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceee----------------ecccccCccEEEEECCCCCEEEEEeC
Confidence 3 345556789999999999999999999987553210 11246789999999999999999999
Q ss_pred CCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeee---ccCCeeeeeccCCCe
Q psy12697 301 DGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF---HSAPALDVDWQSNTS 376 (602)
Q Consensus 301 dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 376 (602)
||.|++||+. ++....+..|...|.+++|+|++++|++++.||.|++||+++++....+.. +...+.++.+.++..
T Consensus 160 d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 239 (420)
T 3vl1_A 160 DMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTD 239 (420)
T ss_dssp TSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCC
T ss_pred CCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCc
Confidence 9999999986 667778889999999999999999999999999999999999998888875 344555555443311
Q ss_pred EEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECC
Q psy12697 377 FASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSP 456 (602)
Q Consensus 377 ~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~ 456 (602)
......+...+.+++|+|++++|++++.||.|++||+++++.+..+..
T Consensus 240 --------------------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------------ 287 (420)
T 3vl1_A 240 --------------------RQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS------------ 287 (420)
T ss_dssp --------------------SSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC------------
T ss_pred --------------------ceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc------------
Confidence 012334667889999999999999999999999999998876655432
Q ss_pred CCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCC-EEEEEeCCCeEEEEeCCCCce-eeeecc-cCCCeeEeeecCC
Q psy12697 457 TGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGN-YILSAGVDKTTIIWDAASGQC-EQQFSF-HSAPALDVDWQSN 533 (602)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~dg~i~iwd~~~~~~-~~~~~~-~~~~v~~~~~s~~ 533 (602)
.|...|.+++|+|+++ +|++++.||.|++||+.+++. +..+.. |...+.++.+. +
T Consensus 288 ---------------------~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~ 345 (420)
T 3vl1_A 288 ---------------------KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-A 345 (420)
T ss_dssp ---------------------TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-T
T ss_pred ---------------------ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-C
Confidence 2566778888888888 999999999999999998754 677776 66678888665 5
Q ss_pred c-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCC---eEEEeccCCeEEe
Q psy12697 534 T-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGD---KVGASASDGSVFK 600 (602)
Q Consensus 534 ~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~---~l~~~~~dg~v~i 600 (602)
+ .|++++.|+.|++|++........+.... .........+.|.+++|+|+++ .|++++.+|.+.+
T Consensus 346 ~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~ 414 (420)
T 3vl1_A 346 GALFVSSGFDTSIKLDIISDPESERPAIEFE--TPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCAL 414 (420)
T ss_dssp TEEEEEETTTEEEEEEEECCTTCCSCEECTT--SCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEE
T ss_pred CCEEEEecCCccEEEEeccCCCCCccceecc--CccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEE
Confidence 6 99999999999999998754332222111 1112223457899999999999 7777888887765
No 44
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.4e-42 Score=334.10 Aligned_cols=283 Identities=18% Similarity=0.261 Sum_probs=243.4
Q ss_pred CCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCc--
Q psy12697 278 PSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ-- 354 (602)
Q Consensus 278 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-- 354 (602)
.|...|++++|+|++++|++|+.||.|++||.. +.....+..|...|.+++|+|++++|++++.|+.+++||+.+..
T Consensus 64 gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~ 143 (380)
T 3iz6_a 64 GHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADR 143 (380)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSC
T ss_pred ccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccc
Confidence 357889999999999999999999999999975 66677888999999999999999999999999999999987532
Q ss_pred -----eeEEeeeccCCeeeeeccCC--CeEEEeeCCCeEEEEEcCCCceeeEe-----ccCCCCeEEEEECC-CCCEEEE
Q psy12697 355 -----CEQQFSFHSAPALDVDWQSN--TSFASCSTDQHIHVCKLHSDKPVKSF-----EGHTNEVNAIKWDP-QGLLLAS 421 (602)
Q Consensus 355 -----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~i~d~~~~~~~~~~-----~~~~~~i~~~~~~~-~~~~l~~ 421 (602)
....+..|...+.++.|.|+ ..+++++.|+.|++||+.+++.+..+ .+|...|.+++|+| ++.+|++
T Consensus 144 ~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 223 (380)
T 3iz6_a 144 DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFIS 223 (380)
T ss_dssp CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEE
T ss_pred cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEE
Confidence 34456788889999999885 46999999999999999999988777 67899999999987 8899999
Q ss_pred EECCCeEEEEeCCC-CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeC
Q psy12697 422 CSDDMTLKIWSLDK-DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGV 500 (602)
Q Consensus 422 ~~~dg~i~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~ 500 (602)
|+.|+.|++||++. .+.+..+. +|...|.+++|+|++++|++|+.
T Consensus 224 gs~D~~v~~wd~~~~~~~~~~~~----------------------------------~h~~~v~~v~~~p~~~~l~s~s~ 269 (380)
T 3iz6_a 224 GSCDTTVRLWDLRITSRAVRTYH----------------------------------GHEGDINSVKFFPDGQRFGTGSD 269 (380)
T ss_dssp EETTSCEEEEETTTTCCCCEEEC----------------------------------CCSSCCCEEEECTTSSEEEEECS
T ss_pred EECCCeEEEEECCCCCcceEEEC----------------------------------CcCCCeEEEEEecCCCeEEEEcC
Confidence 99999999999974 34444433 46777888888889999999999
Q ss_pred CCeEEEEeCCCCceeeeecccCC-------CeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEe
Q psy12697 501 DKTTIIWDAASGQCEQQFSFHSA-------PALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYK 572 (602)
Q Consensus 501 dg~i~iwd~~~~~~~~~~~~~~~-------~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 572 (602)
||+|++||+.+++++..+..+.. .|++++|+|+| .|++|+.||.|++||+.+++.+..+.....+
T Consensus 270 D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~------- 342 (380)
T 3iz6_a 270 DGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNS------- 342 (380)
T ss_dssp SSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSS-------
T ss_pred CCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCC-------
Confidence 99999999999998887765432 48999999999 9999999999999999888777665321111
Q ss_pred cCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 573 GTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 573 ~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
+.+.|.+++|+|||++|++|+.||+|+|+
T Consensus 343 h~~~v~~l~~s~dg~~l~sgs~D~~i~iW 371 (380)
T 3iz6_a 343 HEGRISCLGLSSDGSALCTGSWDKNLKIW 371 (380)
T ss_dssp CCCCCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred CCCceEEEEECCCCCEEEEeeCCCCEEEE
Confidence 23779999999999999999999999985
No 45
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.1e-41 Score=334.41 Aligned_cols=314 Identities=17% Similarity=0.176 Sum_probs=259.2
Q ss_pred eeeeecccceeeeeeeccCCceEEEEECCCC-CeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCC
Q psy12697 122 LPLWDVERGECLNTLTRHTEPVYSVAFSPDG-KFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPE 200 (602)
Q Consensus 122 i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (602)
..+|++.+.+....+.+|...|++++|+|++ ++|++|+.|+.|+|||+.+++....+.
T Consensus 55 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------- 113 (383)
T 3ei3_B 55 PFIRSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQ--------------------- 113 (383)
T ss_dssp HHHHHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEEC---------------------
T ss_pred cccccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeee---------------------
Confidence 3466777888899999999999999999999 999999999999999999887654322
Q ss_pred CccccccccccCCcceEeeCCCcceEEEEEcC-CCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCC
Q psy12697 201 SMEVDASIEIPQSKATKLIGHESEVFICAWNP-VKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPS 279 (602)
Q Consensus 201 ~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (602)
..+|...|.+++|+| ++++|++++.|+.|++||+.... ..... ....+
T Consensus 114 -----------------~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~------~~~~~--------~~~~~ 162 (383)
T 3ei3_B 114 -----------------GMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV------IQVFA--------KTDSW 162 (383)
T ss_dssp -----------------CCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE------EEEEE--------CCCCS
T ss_pred -----------------cCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc------eEEEe--------ccCCC
Confidence 236999999999999 67999999999999999998421 11110 01123
Q ss_pred CCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCC-EEEEEecCCcEEEEeCCCCceeEE
Q psy12697 280 NKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGN-YILSAGVDKTTIIWDAASGQCEQQ 358 (602)
Q Consensus 280 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~ 358 (602)
...|.+++|+|++++|++|+.||.|++||+++.....+..|...|.+++|+|+++ +|++++.|+.|++||+++++..
T Consensus 163 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-- 240 (383)
T 3ei3_B 163 DYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK-- 240 (383)
T ss_dssp SCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST--
T ss_pred CCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc--
Confidence 4779999999999999999999999999999888899999999999999999999 8999999999999998764210
Q ss_pred eeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECC-CCCEEEEEECCCeEEEEeCCCCe
Q psy12697 359 FSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDP-QGLLLASCSDDMTLKIWSLDKDN 437 (602)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~ 437 (602)
+..+..+ +|...|.+++|+| ++++|++++.|+.|++||+++++
T Consensus 241 -----------------------------------~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 241 -----------------------------------NSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp -----------------------------------TCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred -----------------------------------cceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 1122333 4888999999999 99999999999999999999887
Q ss_pred eeEeeccccc-------cEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCC
Q psy12697 438 CVHDLQAHNK-------EIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 510 (602)
Q Consensus 438 ~~~~~~~~~~-------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~ 510 (602)
....+..|.. .+. +.|+| ...+..++|+|++++ +++.||.|++||+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~-~~~~p-----------------------~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~ 338 (383)
T 3ei3_B 285 KPDQIIIHPHRQFQHLTPIK-ATWHP-----------------------MYDLIVAGRYPDDQL--LLNDKRTIDIYDAN 338 (383)
T ss_dssp SCSEEEECCBCCCTTSCCCC-CEECS-----------------------SSSEEEEECBCCTTT--CTTCCCCEEEEETT
T ss_pred cccccccccccccccccceE-EeccC-----------------------CCCceEEEecCCccc--ccCCCCeEEEEecC
Confidence 7666654432 222 24444 345677899999998 89999999999999
Q ss_pred CCceeeeecc--cCCCeeEeeecCCc-eEEEeeCCCcEEEeecCC
Q psy12697 511 SGQCEQQFSF--HSAPALDVDWQSNT-SFASCSTDQHIHVCKLHS 552 (602)
Q Consensus 511 ~~~~~~~~~~--~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~ 552 (602)
+++++..+.+ |...+..++|+|++ .|++++ |+.|++||+++
T Consensus 339 ~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 339 SGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 9999999987 45677888999999 888886 99999999853
No 46
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-42 Score=342.77 Aligned_cols=367 Identities=13% Similarity=0.164 Sum_probs=284.4
Q ss_pred eeecccceeeeee-eccCCceEEEEECC-CCCeEEEeeCCceEEEEecCC---ceeEEEeeccCceEEEEeCCCCCCCCC
Q psy12697 124 LWDVERGECLNTL-TRHTEPVYSVAFSP-DGKFLASGSFDKCVHIWSART---GQLVHSYKGTGGIFEVCWNSRGTPPNP 198 (602)
Q Consensus 124 vwd~~~~~~~~~l-~~h~~~V~~~~~s~-d~~~l~s~~~d~~v~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (602)
.|+ .+++.+.++ .+|.+.|++++|+| ++++||+|+.||+|+|||+.+ +....
T Consensus 47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~---------------------- 103 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYS---------------------- 103 (437)
T ss_dssp GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCS----------------------
T ss_pred ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccc----------------------
Confidence 488 568888899 89999999999999 999999999999999999876 32110
Q ss_pred CCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccC
Q psy12697 199 PESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVP 278 (602)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (602)
. ....+|...|.+++|+|++++|++++.||.|++||+........ .....
T Consensus 104 ---------------~-~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~--~~~~~------------ 153 (437)
T 3gre_A 104 ---------------S-SLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESE--VKFLN------------ 153 (437)
T ss_dssp ---------------C-SEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTE--EEEEE------------
T ss_pred ---------------e-eeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCce--eeccc------------
Confidence 0 11225899999999999999999999999999999852110000 00000
Q ss_pred CCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEE--EccCCCEEEEEecCCcEEEEeCCCCcee
Q psy12697 279 SNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALK--WNKRGNYILSAGVDKTTIIWDAASGQCE 356 (602)
Q Consensus 279 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 356 (602)
...+..+.|+|++ +...+.++. +++++++|++++.|+.|++||+++++.+
T Consensus 154 -~~~i~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 205 (437)
T 3gre_A 154 -CECIRKINLKNFG---------------------------KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL 205 (437)
T ss_dssp -EEEEEEEEGGGGS---------------------------SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE
T ss_pred -cceeEEEEccCcc---------------------------cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee
Confidence 0134555555432 344566666 6789999999999999999999999999
Q ss_pred EEeee--ccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEec-cCCCCeEEEEECC----CCCEEEEEECCCeE
Q psy12697 357 QQFSF--HSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFE-GHTNEVNAIKWDP----QGLLLASCSDDMTL 428 (602)
Q Consensus 357 ~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~----~~~~l~~~~~dg~i 428 (602)
..+.. |...+.+++|+|++ .+++++.||.|++||+++++++..+. .|...|.+++|+| ++++|++++.||.|
T Consensus 206 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 206 QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 99988 88999999999875 58889999999999999999988886 7888999996664 68899999999999
Q ss_pred EEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCC--ccCCeEEEEEccCCCEEEEEeCCCeEEE
Q psy12697 429 KIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQ--HKGPIFALKWNKRGNYILSAGVDKTTII 506 (602)
Q Consensus 429 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~i~~s~~~~~l~s~~~dg~i~i 506 (602)
++||+++++++..+..|...+..+.|+|++..+.. ..+.+ |...|.+++|+ ++++|++++.||.|++
T Consensus 286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~ 354 (437)
T 3gre_A 286 TIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEE----------LNFCGIRSLNALSTISVS-NDKILLTDEATSSIVM 354 (437)
T ss_dssp EEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGG----------CCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEE
T ss_pred EEEEcCCCcEEEEEEcCCCCCccceeccccccccc----------ceecccccCCceEEEEEC-CceEEEecCCCCeEEE
Confidence 99999999999999999988888888887754421 12334 89999999999 8899999999999999
Q ss_pred EeCCCCceeeeecccCC---CeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEE
Q psy12697 507 WDAASGQCEQQFSFHSA---PALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCW 582 (602)
Q Consensus 507 wd~~~~~~~~~~~~~~~---~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 582 (602)
||+.++++...+.+|.. .+....++++. .++.. |+............| ...|.+++|
T Consensus 355 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~h-----------~~~I~~i~~ 415 (437)
T 3gre_A 355 FSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK--------MKRTSTHSVDDSLYH-----------HDIINSIST 415 (437)
T ss_dssp EETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE--------CC------------------------CCCEEEEEE
T ss_pred EECCCcccceEEecccccCceEEEEEeecceEEEEEe--------cccccccccCccccc-----------ccceeeEee
Confidence 99999999998887643 34555666666 33333 333333333222223 478999999
Q ss_pred CCC--CCeEEEeccCCeEEee
Q psy12697 583 NSR--GDKVGASASDGSVFKN 601 (602)
Q Consensus 583 spd--g~~l~~~~~dg~v~i~ 601 (602)
+++ +.+|++|+.||.|+|.
T Consensus 416 ~~~~~~~~l~s~~~dG~I~iw 436 (437)
T 3gre_A 416 CEVDETPLLVACDNSGLIGIF 436 (437)
T ss_dssp EESSSSEEEEEEETTSCEEEE
T ss_pred eccCCceEEEEEcCCceEEEe
Confidence 998 7899999999999985
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.8e-40 Score=319.89 Aligned_cols=316 Identities=15% Similarity=0.221 Sum_probs=267.4
Q ss_pred CCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeC
Q psy12697 221 HESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSY 300 (602)
Q Consensus 221 h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 300 (602)
+..+|.+++|+|+|++++++..++.+..|...... . .. ....|...|++++|+|+++++++++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~-------~-~~--------~~~~h~~~v~~~~~~~~~~~l~~~~- 70 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHA-------R-QI--------NTLNHGEVVCAVTISNPTRHVYTGG- 70 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEE-------E-EE--------EEECCSSCCCEEEECSSSSEEEEEC-
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCcc-------c-cc--------eeccCCCceEEEEEecCCcEEEEcC-
Confidence 56789999999999999998887776665432211 0 00 1124678999999999999999999
Q ss_pred CCeEEEEcCCCc----ceeecc--cccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCc--eeEEeeeccCCeeeeecc
Q psy12697 301 DGYARIWTSDGS----LKSTLG--QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ--CEQQFSFHSAPALDVDWQ 372 (602)
Q Consensus 301 dg~i~i~~~~~~----~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~ 372 (602)
||.|++|++... ....+. .|...|.+++|+|++++|++++.||.|++||+.+++ ....+..+...+.++.|+
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~ 150 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAIS 150 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEEC
T ss_pred CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEEC
Confidence 999999998632 222222 788999999999999999999999999999999887 556677788899999999
Q ss_pred CCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEE
Q psy12697 373 SNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYT 451 (602)
Q Consensus 373 ~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~ 451 (602)
+++ .+++++.++.|++||+++++.+..+..|...|.+++|+|++++|++++.||.|++||+++++.+..+.
T Consensus 151 ~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-------- 222 (337)
T 1gxr_A 151 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-------- 222 (337)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--------
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec--------
Confidence 875 58889999999999999999999999999999999999999999999999999999999887665542
Q ss_pred EEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeec
Q psy12697 452 IKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQ 531 (602)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 531 (602)
+...+.+++|+|++++|++++.|+.|++||+.+++.. .+..|...|.+++|+
T Consensus 223 ---------------------------~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~ 274 (337)
T 1gxr_A 223 ---------------------------FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFA 274 (337)
T ss_dssp ---------------------------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEEC
T ss_pred ---------------------------CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEEC
Confidence 3456778888889999999999999999999988754 567799999999999
Q ss_pred CCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 532 SNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 532 ~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
|++ +|++++.||.|++|++.+++.+... .....+.+++|+|++++|++++.||.|++.
T Consensus 275 ~~~~~l~~~~~dg~i~~~~~~~~~~~~~~------------~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 333 (337)
T 1gxr_A 275 YCGKWFVSTGKDNLLNAWRTPYGASIFQS------------KESSSVLSCDISVDDKYIVTGSGDKKATVY 333 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEE------------ECSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred CCCCEEEEecCCCcEEEEECCCCeEEEEe------------cCCCcEEEEEECCCCCEEEEecCCCeEEEE
Confidence 999 9999999999999999877665332 234789999999999999999999999874
No 48
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.9e-40 Score=316.75 Aligned_cols=292 Identities=22% Similarity=0.319 Sum_probs=244.2
Q ss_pred eEeeCCCcceEEEEEcCC-CCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 216 TKLIGHESEVFICAWNPV-KDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 216 ~~l~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
.+|.||.+.|++++|+|+ +++|++|+.|++|++||+.+.......... ....|...|.+++|+|++++
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~-----------~l~~h~~~V~~~~~s~dg~~ 100 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQR-----------ALRGHSHFVSDVVISSDGQF 100 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEE-----------EECCCSSCEEEEEECTTSSE
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeE-----------EEeCCCCCEEEEEECCCCCE
Confidence 467899999999999998 589999999999999999876543221111 12346789999999999999
Q ss_pred EEEEeCCCeEEEEcCCC-cceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeE-EeeeccCCeeeeecc
Q psy12697 295 LATGSYDGYARIWTSDG-SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQ-QFSFHSAPALDVDWQ 372 (602)
Q Consensus 295 l~~~~~dg~i~i~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~ 372 (602)
|++++.|+.|++|+... ........+...+....+++++++|++++.|+.+++||+....... ....+...+..+.|.
T Consensus 101 l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~ 180 (340)
T 4aow_A 101 ALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFS 180 (340)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEEC
T ss_pred EEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEc
Confidence 99999999999999874 4455566778889999999999999999999999999988765433 345677888888887
Q ss_pred CC---CeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccE
Q psy12697 373 SN---TSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEI 449 (602)
Q Consensus 373 ~~---~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i 449 (602)
++ ..+++++.|+.|++||+.+++.+..+.+|...|++++|+|++++|++|+.||.|++||+++.+.+..+..
T Consensus 181 ~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~----- 255 (340)
T 4aow_A 181 PNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG----- 255 (340)
T ss_dssp SCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-----
T ss_pred cCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC-----
Confidence 65 3578899999999999999999999999999999999999999999999999999999999888776643
Q ss_pred EEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec---------c
Q psy12697 450 YTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS---------F 520 (602)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------~ 520 (602)
...|.+++|+|++. +++++.|+.|++||++++..+..+. .
T Consensus 256 ------------------------------~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 304 (340)
T 4aow_A 256 ------------------------------GDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKA 304 (340)
T ss_dssp ------------------------------SSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------C
T ss_pred ------------------------------CceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccC
Confidence 23456666666665 5566679999999999887765543 5
Q ss_pred cCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCC
Q psy12697 521 HSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDK 554 (602)
Q Consensus 521 ~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~ 554 (602)
|...|++++|+||+ +|++|+.||.|+|||+++|.
T Consensus 305 h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 305 EPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp CCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 78899999999999 99999999999999988764
No 49
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=7.8e-40 Score=321.30 Aligned_cols=283 Identities=19% Similarity=0.355 Sum_probs=242.8
Q ss_pred CCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-Ccceeeccccc------------------CCeEEEEEccCCCEEEEE
Q psy12697 279 SNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHK------------------GPIFALKWNKRGNYILSA 339 (602)
Q Consensus 279 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~------------------~~i~~~~~~~~~~~l~~~ 339 (602)
|...|.+++|+|+|++|++|+ ++.+++|+.. +.....+..|. ..|.+++|+|++++|+++
T Consensus 63 h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp CSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred CCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 568899999999999999986 6889999976 55555554432 248999999999999999
Q ss_pred ecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECC-CCC
Q psy12697 340 GVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDP-QGL 417 (602)
Q Consensus 340 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~ 417 (602)
+.|+.|++||+.+++....+..|...+.+++|+|++ .+++++.|+.|++||+++++....+. +...+.+++|+| +++
T Consensus 142 ~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~ 220 (393)
T 1erj_A 142 AEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGK 220 (393)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCC
T ss_pred cCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCC
Confidence 999999999999999999999999999999999874 68899999999999999998877776 567799999999 899
Q ss_pred EEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEE
Q psy12697 418 LLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILS 497 (602)
Q Consensus 418 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s 497 (602)
+|++|+.||.|++||++++..+..+.... ....+|...|.+++|+|+|++|++
T Consensus 221 ~l~~~s~d~~v~iwd~~~~~~~~~~~~~~---------------------------~~~~~h~~~v~~v~~~~~g~~l~s 273 (393)
T 1erj_A 221 YIAAGSLDRAVRVWDSETGFLVERLDSEN---------------------------ESGTGHKDSVYSVVFTRDGQSVVS 273 (393)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC---------------------------------CCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEeecccc---------------------------cCCCCCCCCEEEEEECCCCCEEEE
Confidence 99999999999999999887766553211 012358889999999999999999
Q ss_pred EeCCCeEEEEeCCCC------------ceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccc
Q psy12697 498 AGVDKTTIIWDAASG------------QCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTT 564 (602)
Q Consensus 498 ~~~dg~i~iwd~~~~------------~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~ 564 (602)
++.|+.|++||+.+. .+...+.+|...|.+++|+|++ +|++++.|+.|++||+.+++++..+.+|.
T Consensus 274 ~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~- 352 (393)
T 1erj_A 274 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHR- 352 (393)
T ss_dssp EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCS-
T ss_pred EeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCC-
Confidence 999999999999753 4556778899999999999999 99999999999999999999888888776
Q ss_pred cceEEEEecCCcEEEEEECC------CCCeEEEeccCCeEEee
Q psy12697 565 GQLVHSYKGTGGIFEVCWNS------RGDKVGASASDGSVFKN 601 (602)
Q Consensus 565 ~~~~~~~~~~~~i~~l~~sp------dg~~l~~~~~dg~v~i~ 601 (602)
+.|.+++|+| ++++||+|+.||+|+|+
T Consensus 353 ----------~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW 385 (393)
T 1erj_A 353 ----------NSVISVAVANGSSLGPEYNVFATGSGDCKARIW 385 (393)
T ss_dssp ----------SCEEEEEECSSCTTCTTCEEEEEEETTSEEEEE
T ss_pred ----------CCEEEEEecCCcCcCCCCCEEEEECCCCcEEEC
Confidence 6799999876 78999999999999985
No 50
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-39 Score=308.00 Aligned_cols=295 Identities=24% Similarity=0.382 Sum_probs=253.3
Q ss_pred ceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcccccccc
Q psy12697 130 GECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIE 209 (602)
Q Consensus 130 ~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (602)
.+.++++.+|.+.|++++| |++++|++++.||.|++||+.+++...
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~--------------------------------- 53 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGT--------------------------------- 53 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEE---------------------------------
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEE---------------------------------
Confidence 3778899999999999999 999999999999999999998887664
Q ss_pred ccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeC
Q psy12697 210 IPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWN 289 (602)
Q Consensus 210 ~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 289 (602)
.+..|...|.+++|+|++++|++++.|+.|++|++.......... ....|...|.+++|
T Consensus 54 -------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-------------~~~~~~~~i~~~~~- 112 (313)
T 3odt_A 54 -------VVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLY-------------TLIGHQGNVCSLSF- 112 (313)
T ss_dssp -------EEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-C-------------EECCCSSCEEEEEE-
T ss_pred -------EeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCccc-------------chhhcccCEEEEEe-
Confidence 345689999999999999999999999999999998754322111 11235788999999
Q ss_pred CCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEcc-CCCEEEEEecCCcEEEEeCCCCceeEEeee-ccCCee
Q psy12697 290 NNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSF-HSAPAL 367 (602)
Q Consensus 290 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-~~~~~~ 367 (602)
+++++++++.||.|++|| .+.....+..|...+.+++|.| +++++++++.||.|++|| ..+....+.. +...+.
T Consensus 113 -~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~ 188 (313)
T 3odt_A 113 -QDGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVR 188 (313)
T ss_dssp -ETTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEE
T ss_pred -cCCEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEE
Confidence 577999999999999999 6677778888999999999998 899999999999999999 4566666666 888999
Q ss_pred eeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccc
Q psy12697 368 DVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNK 447 (602)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 447 (602)
++.|++++.+++++.++.|++||+++++++..+.+|...|.+++|+|++ .|++++.||.|++||+++++.+..+..|..
T Consensus 189 ~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~ 267 (313)
T 3odt_A 189 HLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAI 267 (313)
T ss_dssp EEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSS
T ss_pred EEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCc
Confidence 9999999999999999999999999999999999999999999999999 689999999999999999888877766544
Q ss_pred cEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec
Q psy12697 448 EIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS 519 (602)
Q Consensus 448 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 519 (602)
.|.+++|+|+++ +++++.||.|++||+.+++......
T Consensus 268 ----------------------------------~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 268 ----------------------------------SIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp ----------------------------------CEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC---
T ss_pred ----------------------------------eEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehhh
Confidence 455566666777 6679999999999999887765443
No 51
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.8e-41 Score=337.92 Aligned_cols=312 Identities=20% Similarity=0.249 Sum_probs=241.1
Q ss_pred ceeeeeeeccCCceEEEEECC-CCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccc
Q psy12697 130 GECLNTLTRHTEPVYSVAFSP-DGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASI 208 (602)
Q Consensus 130 ~~~~~~l~~h~~~V~~~~~s~-d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (602)
.+......+|...|+||+|+| ++++||+|+.||+|+|||+.+++....
T Consensus 109 ~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~------------------------------- 157 (435)
T 4e54_B 109 YRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTF------------------------------- 157 (435)
T ss_dssp TTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEE-------------------------------
T ss_pred eeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeE-------------------------------
Confidence 344566788999999999999 678999999999999999987754322
Q ss_pred cccCCcceEeeCCCcceEEEEEcC-CCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEe
Q psy12697 209 EIPQSKATKLIGHESEVFICAWNP-VKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLD 287 (602)
Q Consensus 209 ~~~~~~~~~l~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 287 (602)
..+.+|.+.|.+++|+| ++++|++++.||+|++||+++... .... ....+...+.+++
T Consensus 158 -------~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~------~~~~--------~~~~~~~~~~~~~ 216 (435)
T 4e54_B 158 -------IKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL------RVFA--------SSDTINIWFCSLD 216 (435)
T ss_dssp -------ECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE------EEEE--------CCSSCSCCCCCEE
T ss_pred -------EEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce------eEEe--------ccCCCCccEEEEE
Confidence 23457999999999998 678999999999999999975421 1000 0112235678999
Q ss_pred eCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCC-EEEEEecCCcEEEEeCCCCceeEEeeeccCCe
Q psy12697 288 WNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGN-YILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 366 (602)
Q Consensus 288 ~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~ 366 (602)
|+|++++|++|+.||.|++||++++....+..|...|.+++|+|+++ ++++++.|+.|++||+++.+....
T Consensus 217 ~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~-------- 288 (435)
T 4e54_B 217 VSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKAS-------- 288 (435)
T ss_dssp EETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSC--------
T ss_pred ECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccce--------
Confidence 99999999999999999999999988888999999999999999886 677899999999999886543211
Q ss_pred eeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeecccc
Q psy12697 367 LDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHN 446 (602)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 446 (602)
.....+|...|++++|+|+|++|++++.||.|++||+.++.....+..|.
T Consensus 289 ------------------------------~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~ 338 (435)
T 4e54_B 289 ------------------------------FLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHP 338 (435)
T ss_dssp ------------------------------CSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCC
T ss_pred ------------------------------EEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccc
Confidence 12234688899999999999999999999999999999988777766554
Q ss_pred cc------EEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe-CCCeEEEEeCCCCceeeeec
Q psy12697 447 KE------IYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAASGQCEQQFS 519 (602)
Q Consensus 447 ~~------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~ 519 (602)
.. +....|+| ...+..+.+++++..++.++ .++.|++||..+++.+..+.
T Consensus 339 ~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~ 395 (435)
T 4e54_B 339 HRHFQHLTPIKAAWHP-----------------------RYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY 395 (435)
T ss_dssp CCCCSSSCCCBCEECS-----------------------SSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC
T ss_pred ccccccceeEEEEEcC-----------------------CCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe
Confidence 32 11122222 23344556666666555444 34679999999999987764
Q ss_pred -ccCCCeeEe-eecCCc-eEEEeeCCCcEEEeecCCCCc
Q psy12697 520 -FHSAPALDV-DWQSNT-SFASCSTDQHIHVCKLHSDKP 555 (602)
Q Consensus 520 -~~~~~v~~~-~~s~~~-~l~~~~~d~~i~iw~~~~~~~ 555 (602)
.|...|.++ +|+|+| +|++| .|+.|+||+++++++
T Consensus 396 ~~~~~~v~s~~~fspdg~~lasg-~d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 396 DPESSGISSLNEFNPMGDTLASA-MGYHILIWSQQEART 433 (435)
T ss_dssp CSSCCCCCCEEEECTTSSCEEEE-CSSEEEECCCC----
T ss_pred CCCCCcEEEEEEECCCCCEEEEE-cCCcEEEEECCcCee
Confidence 678888887 699999 77765 488999999987764
No 52
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-41 Score=340.12 Aligned_cols=339 Identities=12% Similarity=0.142 Sum_probs=243.2
Q ss_pred cCCceEEEEECCCC---------CeEEE-------------------eeCCceEEEEecCCceeEEEeeccCceEEEEeC
Q psy12697 139 HTEPVYSVAFSPDG---------KFLAS-------------------GSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWN 190 (602)
Q Consensus 139 h~~~V~~~~~s~d~---------~~l~s-------------------~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 190 (602)
+.+.|.+|+|+|++ ++||+ ++.|++|+|||+.+++.....
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~------------ 199 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVK------------ 199 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEE------------
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceE------------
Confidence 56677777777765 55555 557899999998876532110
Q ss_pred CCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCC------CCEEEEeeCCCcEEEEeCCCCCCCCCccceE
Q psy12697 191 SRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPV------KDFLASGSGDSTARIWDMTDSTKKDPKELQI 264 (602)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~------~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~ 264 (602)
...+.+|.+.|.+++|+|+ +.+||+++.||+|++||+..+........
T Consensus 200 ------------------------~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~-- 253 (524)
T 2j04_B 200 ------------------------VQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK-- 253 (524)
T ss_dssp ------------------------EEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE--
T ss_pred ------------------------EEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce--
Confidence 0234567889999999997 57999999999999999987643211000
Q ss_pred EEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCC--cceeecccccCCeEEE--EEccCC-CEEEEE
Q psy12697 265 VLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDG--SLKSTLGQHKGPIFAL--KWNKRG-NYILSA 339 (602)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~--~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~ 339 (602)
....+......|...|++++|++++ .|++|+.||.|++||++. .....+..|...|.++ .|+|++ ++|+++
T Consensus 254 ---~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~ 329 (524)
T 2j04_B 254 ---MCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTV 329 (524)
T ss_dssp ---CCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEE
T ss_pred ---eecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEe
Confidence 0000001123467889999999864 899999999999999873 3345678899999999 578887 899999
Q ss_pred ecCCcEEEEeCCCCceeEEeeeccC--CeeeeeccCC-CeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCC
Q psy12697 340 GVDKTTIIWDAASGQCEQQFSFHSA--PALDVDWQSN-TSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQG 416 (602)
Q Consensus 340 ~~dg~i~~wd~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 416 (602)
+.|++|++||++++++...+..+.. .+.+++|+|+ ..+++++.|+.|++||++++..+..+.+|.+.|++++|+|++
T Consensus 330 S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g 409 (524)
T 2j04_B 330 AVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLH 409 (524)
T ss_dssp ETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSC
T ss_pred ccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCC
Confidence 9999999999999888777766543 4788999996 468888999999999999999888899999999999999999
Q ss_pred CEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEE
Q psy12697 417 LLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYIL 496 (602)
Q Consensus 417 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~ 496 (602)
++|++|+.||+|++||+..+ .+........ ..+...+..++|+|+++.+.
T Consensus 410 ~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~-----------------------------~~~~~~v~~v~~sp~g~~~~ 459 (524)
T 2j04_B 410 PMVLAGSADGSLIITNAARR-LLHGIKNSSA-----------------------------TQKSLRLWKWDYSIKDDKYR 459 (524)
T ss_dssp CBCEEEETTTEEECCBSCSS-TTTCC-----------------------------------CCCCEEEECBCCSSSCEEE
T ss_pred CeEEEEECCCEEEEEechHh-hccccccCcc-----------------------------ceeeeEEEEeccCCCCCeEE
Confidence 99999999999999998643 1111110000 00122456788888888552
Q ss_pred EEeCCCeEEEEeCC-CCceeeeecccCCCeeEeeecCCc----eEEEeeCCCcEEEeecCC
Q psy12697 497 SAGVDKTTIIWDAA-SGQCEQQFSFHSAPALDVDWQSNT----SFASCSTDQHIHVCKLHS 552 (602)
Q Consensus 497 s~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~s~~~----~l~~~~~d~~i~iw~~~~ 552 (602)
... .+.+|+.. ++.++..+.+|...|.+++|+|++ .+|+|+.||.|+||++.-
T Consensus 460 -~~~--~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 460 -IDS--SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp -ECC--CCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred -ccC--CceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 222 24455443 577888899999999999999994 799999999999999854
No 53
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.9e-39 Score=327.20 Aligned_cols=320 Identities=21% Similarity=0.346 Sum_probs=271.1
Q ss_pred eeeeeeeccCCce-EEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcccccccc
Q psy12697 131 ECLNTLTRHTEPV-YSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIE 209 (602)
Q Consensus 131 ~~~~~l~~h~~~V-~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (602)
.....+.+|...| .++.| ++++|++|+.||+|++||+.+++.+.
T Consensus 112 ~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~--------------------------------- 156 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLL--------------------------------- 156 (464)
T ss_dssp CEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEE---------------------------------
T ss_pred cceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEE---------------------------------
Confidence 4567899999885 66665 57899999999999999999998774
Q ss_pred ccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeC
Q psy12697 210 IPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWN 289 (602)
Q Consensus 210 ~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 289 (602)
.+.+|...|.+++|+|++ +|++++.||+|++||+.++.... ....|...|.+++|+
T Consensus 157 -------~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~----------------~~~~h~~~v~~l~~~ 212 (464)
T 3v7d_B 157 -------QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTH----------------VFEGHNSTVRCLDIV 212 (464)
T ss_dssp -------EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEE----------------EECCCSSCEEEEEEE
T ss_pred -------EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEE----------------EECCCCCccEEEEEe
Confidence 445799999999999988 99999999999999998764211 112357889999998
Q ss_pred --CCCCeEEEEeCCCeEEEEcCCCcc------------------------eeecccccCCeEEEEEccCCCEEEEEecCC
Q psy12697 290 --NNGSFLATGSYDGYARIWTSDGSL------------------------KSTLGQHKGPIFALKWNKRGNYILSAGVDK 343 (602)
Q Consensus 290 --~~~~~l~~~~~dg~i~i~~~~~~~------------------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 343 (602)
++++++++|+.||.|++||+.... ...+.+|...+.++ +++++++++++.||
T Consensus 213 ~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~ 290 (464)
T 3v7d_B 213 EYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDN 290 (464)
T ss_dssp ESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTS
T ss_pred cCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCC
Confidence 578999999999999999977432 44567788888877 57789999999999
Q ss_pred cEEEEeCCCCceeEEeeeccCCeeeeeccCC-CeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEE
Q psy12697 344 TTIIWDAASGQCEQQFSFHSAPALDVDWQSN-TSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASC 422 (602)
Q Consensus 344 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 422 (602)
.|++||+++++.+..+..|...+.++.|+++ ..+++++.||.|++||+.+++++..+.+|...|.+++|+ +++|+++
T Consensus 291 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~ 368 (464)
T 3v7d_B 291 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSA 368 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEE
T ss_pred eEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEE
Confidence 9999999999999999999999999999987 568999999999999999999999999999999999998 5799999
Q ss_pred ECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCC
Q psy12697 423 SDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDK 502 (602)
Q Consensus 423 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg 502 (602)
+.||.|++||+.++....... +...+..++|+|+++++++++ ||
T Consensus 369 s~dg~v~vwd~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~l~~~~-dg 412 (464)
T 3v7d_B 369 AADGSIRGWDANDYSRKFSYH-----------------------------------HTNLSAITTFYVSDNILVSGS-EN 412 (464)
T ss_dssp ETTSEEEEEETTTCCEEEEEE-----------------------------------CTTCCCEEEEEECSSEEEEEE-TT
T ss_pred eCCCcEEEEECCCCceeeeec-----------------------------------CCCCccEEEEEeCCCEEEEec-CC
Confidence 999999999998866543331 344566788899999999998 89
Q ss_pred eEEEEeCCCCceeee-ecccCCCeeEeeecCCceEEEeeCCCcEEEee
Q psy12697 503 TTIIWDAASGQCEQQ-FSFHSAPALDVDWQSNTSFASCSTDQHIHVCK 549 (602)
Q Consensus 503 ~i~iwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~l~~~~~d~~i~iw~ 549 (602)
.|++||+.+++++.. +..|...|.+++|+++..+++++.||.+.+|-
T Consensus 413 ~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 413 QFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp EEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred eEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCeEEEEE
Confidence 999999999999875 66789999999998444667777777766554
No 54
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-41 Score=331.04 Aligned_cols=316 Identities=8% Similarity=0.087 Sum_probs=251.5
Q ss_pred eccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcce
Q psy12697 137 TRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKAT 216 (602)
Q Consensus 137 ~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (602)
+.-...|.+++|||||+++||++.|++|+ |...++
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~------------------------------------------- 46 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK------------------------------------------- 46 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS-------------------------------------------
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--cccccc-------------------------------------------
Confidence 34568899999999999999999999999 643332
Q ss_pred EeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEE
Q psy12697 217 KLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLA 296 (602)
Q Consensus 217 ~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 296 (602)
.+.+|...|++++|+|+| .++.+.+|+.+.... .. ..+...|.+++|+|+|++||
T Consensus 47 ~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~~---~~---------------~~~~~~V~~vawSPdG~~LA 101 (588)
T 2j04_A 47 DINCNSKNLFHVKEFPLE-------FENKLDFELAQQNGL---LN---------------SQPVCYPRVCKPSPIDDWMA 101 (588)
T ss_dssp CCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSCS---ST---------------TSCSCCEEEEEECSSSSCEE
T ss_pred eecCCCccEEEEEECCCC-------CcceEEEEeCCCceE---ee---------------cCCCCcEEEEEECCCCCEEE
Confidence 225799999999999998 455555555432221 11 12257799999999999999
Q ss_pred EEeCCCeEEEEcCCCcceeecccccC-----CeEEEEEccCCCEEEEEecCCcEEEEeCCCCce-------eEEe----e
Q psy12697 297 TGSYDGYARIWTSDGSLKSTLGQHKG-----PIFALKWNKRGNYILSAGVDKTTIIWDAASGQC-------EQQF----S 360 (602)
Q Consensus 297 ~~~~dg~i~i~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~-------~~~~----~ 360 (602)
+++.||.|++|+.++ ....+. |.. .+.+++|||+|++|++|+.||+|++||+.++.. +..+ .
T Consensus 102 s~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~ 179 (588)
T 2j04_A 102 VLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDA 179 (588)
T ss_dssp EEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCT
T ss_pred EEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccc
Confidence 999999999999766 555556 665 499999999999999999999999999998863 4555 4
Q ss_pred eccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCce---eeEe-ccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCC
Q psy12697 361 FHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKP---VKSF-EGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKD 436 (602)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~---~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 436 (602)
+|...|.+++|+|++ +++++.|+.+++||+.+++. ..++ .+|...|.+++|+ ++.||+++ ++.|++||+.++
T Consensus 180 gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~ 255 (588)
T 2j04_A 180 GSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNY 255 (588)
T ss_dssp TCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTT
T ss_pred cccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCC
Confidence 566799999999999 99999999999999988773 3456 4788999999999 68999997 699999999987
Q ss_pred eeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEE--ccCCCEEEEEeCCCeEEEEeCCCCce
Q psy12697 437 NCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKW--NKRGNYILSAGVDKTTIIWDAASGQC 514 (602)
Q Consensus 437 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~--s~~~~~l~s~~~dg~i~iwd~~~~~~ 514 (602)
+......+ |...|..++| +||+..|++++.||+ ++|...
T Consensus 256 ~~~~~~~g----------------------------------h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d---- 296 (588)
T 2j04_A 256 SISSLKTG----------------------------------SLENFHIIPLNHEKESTILLMSNKTSY-KVLLED---- 296 (588)
T ss_dssp EEEEEECS----------------------------------CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS----
T ss_pred eEEEEEcC----------------------------------CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec----
Confidence 66333223 5566677777 778889999999999 999977
Q ss_pred eeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEec
Q psy12697 515 EQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASA 593 (602)
Q Consensus 515 ~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~ 593 (602)
.+.++||+ .+++. |+++++|+...+. +..+++ ...|.+++|||||+.+|+++
T Consensus 297 ------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~------------~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 297 ------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET------------TLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp ------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC------------EEEEEEEEECTTSSEEEEEE
T ss_pred ------------cEEECCCceEEEEc--CCEEEEEECCCCc-eeeecc------------ceEEEEEEECCCCCEEEEEE
Confidence 26699999 55553 9999999975443 333322 24599999999999999987
Q ss_pred c
Q psy12697 594 S 594 (602)
Q Consensus 594 ~ 594 (602)
.
T Consensus 350 ~ 350 (588)
T 2j04_A 350 D 350 (588)
T ss_dssp E
T ss_pred e
Confidence 5
No 55
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.1e-39 Score=311.08 Aligned_cols=289 Identities=21% Similarity=0.330 Sum_probs=232.4
Q ss_pred cCCCCceeEEee-----CC-CCCeEEEEeCCCeEEEEcCCC--------cceeecccccCCeEEEEEccCCCEEEEEecC
Q psy12697 277 VPSNKDVTSLDW-----NN-NGSFLATGSYDGYARIWTSDG--------SLKSTLGQHKGPIFALKWNKRGNYILSAGVD 342 (602)
Q Consensus 277 ~~~~~~i~~~~~-----~~-~~~~l~~~~~dg~i~i~~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 342 (602)
..|...|++++| ++ ++++|++|+.|+.|++||+.. .....+.+|...|.+++|+|++.++++++.|
T Consensus 18 ~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D 97 (343)
T 2xzm_R 18 EGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWD 97 (343)
T ss_dssp ECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETT
T ss_pred ccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCC
Confidence 356789999999 76 899999999999999999753 2355678999999999999999999999999
Q ss_pred CcEEEEeCCCCceeEEeeeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeE--eccCCCCeEEEEECCCC---
Q psy12697 343 KTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKS--FEGHTNEVNAIKWDPQG--- 416 (602)
Q Consensus 343 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~--- 416 (602)
++|++||+++++....+..|...+.+++|+|++ .+++++.|+.|++||+........ ..+|...|.+++|+|++
T Consensus 98 ~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 177 (343)
T 2xzm_R 98 KTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSA 177 (343)
T ss_dssp SEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSC
T ss_pred CcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccc
Confidence 999999999999999999999999999999985 688999999999999984432222 23688899999999987
Q ss_pred -------CEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEc
Q psy12697 417 -------LLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWN 489 (602)
Q Consensus 417 -------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s 489 (602)
.+|++++.||.|++||. ..+....+. +|...|.+++|+
T Consensus 178 ~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~----------------------------------~h~~~v~~~~~s 222 (343)
T 2xzm_R 178 NKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFK----------------------------------AHESNVNHLSIS 222 (343)
T ss_dssp SCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEE----------------------------------CCSSCEEEEEEC
T ss_pred cccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEc----------------------------------CccccceEEEEC
Confidence 79999999999999994 344444433 366677788888
Q ss_pred cCCCEEEEEeCCCeEEEEeCCC-CceeeeecccCCCeeEeeecCCceEEEeeCCCcEEEeecCCCCcee--eeecccccc
Q psy12697 490 KRGNYILSAGVDKTTIIWDAAS-GQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVK--SFEGHTTGQ 566 (602)
Q Consensus 490 ~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~--~~~~~~~~~ 566 (602)
|+|++|++|+.||.|++||+.+ ......+. +...|.+++|+|++.+++++.|+.|++|++.+++... .+.......
T Consensus 223 ~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~ 301 (343)
T 2xzm_R 223 PNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITK 301 (343)
T ss_dssp TTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGG
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchh
Confidence 8999999999999999999954 44444443 5667999999999955567778999999998876544 333111000
Q ss_pred eEEEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 567 LVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 567 ~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
......+...|.+++|+|+|++|++|+.||.|++.
T Consensus 302 ~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w 336 (343)
T 2xzm_R 302 AEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTF 336 (343)
T ss_dssp BTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEE
T ss_pred hhhhcCCCCceEEEEECCCCCeEEEecCCceEEEE
Confidence 00000123679999999999999999999999874
No 56
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-39 Score=310.73 Aligned_cols=277 Identities=24% Similarity=0.377 Sum_probs=221.1
Q ss_pred CCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCC---cceeec-cc-ccCCeEEEEEccCCCEEEEEecCCcEEEEeCCC
Q psy12697 278 PSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDG---SLKSTL-GQ-HKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS 352 (602)
Q Consensus 278 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~---~~~~~~-~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 352 (602)
.|...|.+++|+|+ +|++|+.|+.|++|++.. .....+ .. |...|.+++|+|++++|++++.|++|++||+..
T Consensus 12 ~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~ 89 (330)
T 2hes_X 12 LYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEE 89 (330)
T ss_dssp CCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC--
T ss_pred cCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEccc
Confidence 46789999999988 999999999999999874 233344 34 999999999999999999999999999999853
Q ss_pred -------CceeEEeeeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCC----ceeeEeccCCCCeEEEEECCCCCEEE
Q psy12697 353 -------GQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSD----KPVKSFEGHTNEVNAIKWDPQGLLLA 420 (602)
Q Consensus 353 -------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~ 420 (602)
.+....+..|...+.+++|+|++ .+++++.|+.|++||+... +.+..+.+|...|.+++|+|++++|+
T Consensus 90 ~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 169 (330)
T 2hes_X 90 SADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLA 169 (330)
T ss_dssp -----CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEE
T ss_pred CcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEE
Confidence 34566778899999999999985 5889999999999999532 45678899999999999999999999
Q ss_pred EEECCCeEEEEeCCCC--eeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccC--CCEEE
Q psy12697 421 SCSDDMTLKIWSLDKD--NCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKR--GNYIL 496 (602)
Q Consensus 421 ~~~~dg~i~iwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~--~~~l~ 496 (602)
+++.|+.|++||..++ +++..+.+ |...|.+++|+|+ +.+|+
T Consensus 170 s~s~D~~i~iW~~~~~~~~~~~~~~~----------------------------------h~~~v~~~~~~~~~~~~~l~ 215 (330)
T 2hes_X 170 SSSYDDTVRIWKDYDDDWECVAVLNG----------------------------------HEGTVWSSDFDKTEGVFRLC 215 (330)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECC----------------------------------CSSCEEEEEECCSSSSCEEE
T ss_pred EEcCCCeEEEEECCCCCeeEEEEccC----------------------------------CCCcEEEEEecCCCCeeEEE
Confidence 9999999999998765 44455544 5555666666666 67899
Q ss_pred EEeCCCeEEEEeCCCC--------ceeeeecc-cCCCeeEeeecCCceEEEeeCCCcEEEeecCCCC--ceeee-ecccc
Q psy12697 497 SAGVDKTTIIWDAASG--------QCEQQFSF-HSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDK--PVKSF-EGHTT 564 (602)
Q Consensus 497 s~~~dg~i~iwd~~~~--------~~~~~~~~-~~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~--~~~~~-~~~~~ 564 (602)
+++.|++|++||+.++ .+...+.. |...|.+++|++++.|++++.||.|++|+..+++ ..... .+|
T Consensus 216 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h-- 293 (330)
T 2hes_X 216 SGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCH-- 293 (330)
T ss_dssp EEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTT--
T ss_pred EEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEecccccc--
Confidence 9999999999998765 34455554 8999999999988899999999999999986653 11111 122
Q ss_pred cceEEEEecCC-cEEEEEECC--CCCeEEEeccCCeEEee
Q psy12697 565 GQLVHSYKGTG-GIFEVCWNS--RGDKVGASASDGSVFKN 601 (602)
Q Consensus 565 ~~~~~~~~~~~-~i~~l~~sp--dg~~l~~~~~dg~v~i~ 601 (602)
.. .|.+++|+| ++++||+++.||+|+|+
T Consensus 294 ---------~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W 324 (330)
T 2hes_X 294 ---------GVYEINVVKWLELNGKTILATGGDDGIVNFW 324 (330)
T ss_dssp ---------TTSCEEEEEEC-----CCEEEEETTSEEEEE
T ss_pred ---------ccceEEEEEEecCCCceEEEEecCCCcEEEE
Confidence 23 799999999 78999999999999885
No 57
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.4e-39 Score=306.00 Aligned_cols=273 Identities=21% Similarity=0.354 Sum_probs=224.0
Q ss_pred CCcccCCcceeccceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEE
Q psy12697 108 GPAITNGEEVHRLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEV 187 (602)
Q Consensus 108 ~~~~~~~~~~~~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 187 (602)
++.++.+. .+++|+|||+++++.++.+.+|..+|.+++|+|++++|++|+.|++|++||+.+++.+.
T Consensus 25 ~~~l~s~~--~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~----------- 91 (304)
T 2ynn_A 25 EPWVLTTL--YSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV----------- 91 (304)
T ss_dssp SSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE-----------
T ss_pred CCEEEEEc--CCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEE-----------
Confidence 44444433 46899999999999999999999999999999999999999999999999999998774
Q ss_pred EeCCCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEE
Q psy12697 188 CWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLR 267 (602)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~ 267 (602)
.+.+|...|.+++|+|++++|++++.|++|++||+.++..
T Consensus 92 -----------------------------~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~----------- 131 (304)
T 2ynn_A 92 -----------------------------DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA----------- 131 (304)
T ss_dssp -----------------------------EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE-----------
T ss_pred -----------------------------EEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc-----------
Confidence 4557999999999999999999999999999999854310
Q ss_pred EEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEcc-CCCEEEEEecCCcEE
Q psy12697 268 HCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTI 346 (602)
Q Consensus 268 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~ 346 (602)
....+.+|...|.+++|+| ++..|++++.|++|+
T Consensus 132 ---------------------------------------------~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~ 166 (304)
T 2ynn_A 132 ---------------------------------------------LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (304)
T ss_dssp ---------------------------------------------EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEE
T ss_pred ---------------------------------------------hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEE
Confidence 1123446888899999998 678899999999999
Q ss_pred EEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECC--CCCEEEEEEC
Q psy12697 347 IWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDP--QGLLLASCSD 424 (602)
Q Consensus 347 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~ 424 (602)
+||++++.....+ ..+|...+..++|+| ++++|++++.
T Consensus 167 iwd~~~~~~~~~~----------------------------------------~~~~~~~v~~~~~~~~~~~~~l~s~s~ 206 (304)
T 2ynn_A 167 VWSLGQSTPNFTL----------------------------------------TTGQERGVNYVDYYPLPDKPYMITASD 206 (304)
T ss_dssp EEETTCSSCSEEE----------------------------------------ECCCTTCEEEEEECCSTTCCEEEEEET
T ss_pred EEECCCCCcccee----------------------------------------ccCCcCcEEEEEEEEcCCCCEEEEEcC
Confidence 9998765432211 123556688888876 7789999999
Q ss_pred CCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeE
Q psy12697 425 DMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTT 504 (602)
Q Consensus 425 dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i 504 (602)
|+.|++||+++++++.++.+| ...|.+++|+|++++|++|+.||.|
T Consensus 207 D~~i~iWd~~~~~~~~~~~~h----------------------------------~~~v~~~~~~p~~~~l~s~s~Dg~i 252 (304)
T 2ynn_A 207 DLTIKIWDYQTKSCVATLEGH----------------------------------MSNVSFAVFHPTLPIIISGSEDGTL 252 (304)
T ss_dssp TSEEEEEETTTTEEEEEEECC----------------------------------SSCEEEEEECSSSSEEEEEETTSCE
T ss_pred CCeEEEEeCCCCccceeeCCC----------------------------------CCCEEEEEECCCCCEEEEEcCCCeE
Confidence 999999999999888877665 4455666666788899999999999
Q ss_pred EEEeCCCCceeeeecccCCCeeEeeecCCc--eEEEeeCCCcEEEeecCC
Q psy12697 505 IIWDAASGQCEQQFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHS 552 (602)
Q Consensus 505 ~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~--~l~~~~~d~~i~iw~~~~ 552 (602)
++||+.+++++..+..|...+.+++|+|++ .+++++.|+.+.+|++.+
T Consensus 253 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~ 302 (304)
T 2ynn_A 253 KIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (304)
T ss_dssp EEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred EEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEecc
Confidence 999999999999999999999999999987 334455566688888754
No 58
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.7e-40 Score=326.01 Aligned_cols=343 Identities=18% Similarity=0.229 Sum_probs=259.7
Q ss_pred ccceeeeecccceeeeeeeccCCceEEEEECC-CCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCC
Q psy12697 119 RLTLPLWDVERGECLNTLTRHTEPVYSVAFSP-DGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPN 197 (602)
Q Consensus 119 ~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~-d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (602)
+.++++|+++.++....+.+|.+.|++++|+| ++++||+++.||.|++||+.+++....+......
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~------------- 88 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVC------------- 88 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEE-------------
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccc-------------
Confidence 45789999999999999999999999999999 9999999999999999999987654332210000
Q ss_pred CCCCccccccccccCCcceEeeCCCcceEEEEEcC-CCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcc
Q psy12697 198 PPESMEVDASIEIPQSKATKLIGHESEVFICAWNP-VKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTE 276 (602)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (602)
........+|...|.+++|+| ++.+|++++.||.|++||+.++.... .
T Consensus 89 --------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~------~----------- 137 (408)
T 4a11_B 89 --------------SIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTAD------V----------- 137 (408)
T ss_dssp --------------EECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEE------E-----------
T ss_pred --------------cccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccce------e-----------
Confidence 000011235999999999999 77899999999999999998764321 1
Q ss_pred cCCCCceeEEeeCCC---CCeEEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCC-EEEEEecCCcEEEEeCC
Q psy12697 277 VPSNKDVTSLDWNNN---GSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGN-YILSAGVDKTTIIWDAA 351 (602)
Q Consensus 277 ~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~wd~~ 351 (602)
..+...+.++.|+|. +.++++++.+|.|++||+. +.....+..|...|.+++|+|+++ .+++++.||.|++||++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~ 217 (408)
T 4a11_B 138 FNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVR 217 (408)
T ss_dssp EECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred ccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECC
Confidence 113567899999884 4599999999999999987 566778888999999999999998 58899999999999998
Q ss_pred CCc-eeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEE
Q psy12697 352 SGQ-CEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKI 430 (602)
Q Consensus 352 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 430 (602)
++. ....+..+... ...........|...|.+++|+|++++|++++.||.|++
T Consensus 218 ~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 271 (408)
T 4a11_B 218 RASGCLITLDQHNGK--------------------------KSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRL 271 (408)
T ss_dssp CSSCCSEECCTTTTC--------------------------SCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCcccccccccccc--------------------------cceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEE
Confidence 765 23222221111 011122344578899999999999999999999999999
Q ss_pred EeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCC
Q psy12697 431 WSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 510 (602)
Q Consensus 431 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~ 510 (602)
||+.+++.......+... .....+........+..+++++.|+.|++||+.
T Consensus 272 wd~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~ 322 (408)
T 4a11_B 272 WNSSNGENTLVNYGKVCN-----------------------------NSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVY 322 (408)
T ss_dssp EETTTCCBCCCCCCCCCC-----------------------------CCSSCCCCEECCSSSSCEEEEEETTEEEEEETT
T ss_pred EECCCCccceeccccccc-----------------------------cccccceeEEecCCCceEEEEecCCEEEEEECc
Confidence 999988765444322110 011111112222344567777889999999999
Q ss_pred CCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeee
Q psy12697 511 SGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFE 560 (602)
Q Consensus 511 ~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~ 560 (602)
+++++..+.+|...|++++|+|++ .|++++.||.|++|++.+++++....
T Consensus 323 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 323 SGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDD 373 (408)
T ss_dssp TCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--------
T ss_pred CCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCC
Confidence 999999999999999999999999 99999999999999999887765443
No 59
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-39 Score=314.25 Aligned_cols=296 Identities=17% Similarity=0.306 Sum_probs=254.9
Q ss_pred eeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccc
Q psy12697 131 ECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEI 210 (602)
Q Consensus 131 ~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (602)
.....+.+|.+.|++++|+|++++|++++.|+.|++||+.+++.+.
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~---------------------------------- 68 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLG---------------------------------- 68 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEE----------------------------------
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhh----------------------------------
Confidence 4456789999999999999999999999999999999999988774
Q ss_pred cCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC
Q psy12697 211 PQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN 290 (602)
Q Consensus 211 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 290 (602)
.+.+|...|.+++|+|++++|++++.||.|++||+.+++.... ..+...+.+++|+|
T Consensus 69 ------~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-----------------~~~~~~v~~~~~~~ 125 (369)
T 3zwl_B 69 ------TLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVAT-----------------WKSPVPVKRVEFSP 125 (369)
T ss_dssp ------EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEE-----------------EECSSCEEEEEECT
T ss_pred ------hhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE-----------------eecCCCeEEEEEcc
Confidence 3456999999999999999999999999999999987653211 11357899999999
Q ss_pred CCCeEEEEeCC-----CeEEEEcCCCc------------ceeecccccC--CeEEEEEccCCCEEEEEecCCcEEEEeCC
Q psy12697 291 NGSFLATGSYD-----GYARIWTSDGS------------LKSTLGQHKG--PIFALKWNKRGNYILSAGVDKTTIIWDAA 351 (602)
Q Consensus 291 ~~~~l~~~~~d-----g~i~i~~~~~~------------~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i~~wd~~ 351 (602)
+++++++++.+ |.|.+|++... ....+..|.. .+.+++|+|++++|++++.||.|++||++
T Consensus 126 ~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 205 (369)
T 3zwl_B 126 CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVS 205 (369)
T ss_dssp TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETT
T ss_pred CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 99999999999 99999996522 2334445555 89999999999999999999999999999
Q ss_pred C-CceeEEeeeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCC---
Q psy12697 352 S-GQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDM--- 426 (602)
Q Consensus 352 ~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--- 426 (602)
+ ++....+..+...+.++.|+|++ .+++++.|+.|++||+.+++.+..+. +...+.+++|+|+++++++++.++
T Consensus 206 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~ 284 (369)
T 3zwl_B 206 NNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKD 284 (369)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC---
T ss_pred CCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCce
Confidence 9 78888889999999999999885 58888999999999999999888887 778899999999999999999988
Q ss_pred -----------eEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEE
Q psy12697 427 -----------TLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYI 495 (602)
Q Consensus 427 -----------~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l 495 (602)
.+++||+.+++.+..+.. |...|.+++|+|++++|
T Consensus 285 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~----------------------------------~~~~v~~~~~s~~~~~l 330 (369)
T 3zwl_B 285 VTTTSANEGKFEARFYHKIFEEEIGRVQG----------------------------------HFGPLNTVAISPQGTSY 330 (369)
T ss_dssp ----------CEEEEEETTTCCEEEEEEC----------------------------------CSSCEEEEEECTTSSEE
T ss_pred EEEEecCCCcceeEEEecCCCcchhheec----------------------------------ccCcEEEEEECCCCCEE
Confidence 899999988887776655 45566667777788999
Q ss_pred EEEeCCCeEEEEeCCCCceeeee
Q psy12697 496 LSAGVDKTTIIWDAASGQCEQQF 518 (602)
Q Consensus 496 ~s~~~dg~i~iwd~~~~~~~~~~ 518 (602)
++++.||.|++|+++++.....+
T Consensus 331 ~s~~~dg~v~iw~~~~~~~~~~~ 353 (369)
T 3zwl_B 331 ASGGEDGFIRLHHFEKSYFDFKY 353 (369)
T ss_dssp EEEETTSEEEEEEECHHHHTCCC
T ss_pred EEEcCCCeEEEEECccccchhHH
Confidence 99999999999999877654443
No 60
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8.5e-39 Score=320.23 Aligned_cols=316 Identities=22% Similarity=0.412 Sum_probs=270.5
Q ss_pred ceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 215 ATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 215 ~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
...+.+|...|.. ++.+++++|++++.||.|++||+.+++... ....|...|.+++|+ +++
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~----------------~~~~h~~~v~~~~~~--~~~ 171 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLR----------------TLVGHTGGVWSSQMR--DNI 171 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEE----------------ECCCCSSCEEEEEEE--TTE
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEE----------------EEcCCCCCEEEEEec--CCE
Confidence 4678899987643 355568999999999999999998765321 112457889999997 569
Q ss_pred EEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccC
Q psy12697 295 LATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQS 373 (602)
Q Consensus 295 l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 373 (602)
+++|+.||.|++||.. ++....+..|...|.++.|+ ++.+++++.||.|++||+.+++....+..+...+.++.+ .
T Consensus 172 l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-~ 248 (445)
T 2ovr_B 172 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-D 248 (445)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-C
T ss_pred EEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-C
Confidence 9999999999999986 66777888999999999996 568999999999999999999999999999999999999 5
Q ss_pred CCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEE
Q psy12697 374 NTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIK 453 (602)
Q Consensus 374 ~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~ 453 (602)
+..+++++.||.|++||+++++.+..+.+|...|.+++| ++.++++++.||.|++||+++++.+..+..|...+.++.
T Consensus 249 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~ 326 (445)
T 2ovr_B 249 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 326 (445)
T ss_dssp SSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEE
Confidence 678999999999999999999999999999999999999 788999999999999999999988887776655544443
Q ss_pred ECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc---cCCCeeEeee
Q psy12697 454 WSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF---HSAPALDVDW 530 (602)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~ 530 (602)
+ ++++|++++.||.|++||+.+++++..+.. |..+|.+++|
T Consensus 327 ----------------------------------~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 370 (445)
T 2ovr_B 327 ----------------------------------L--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 370 (445)
T ss_dssp ----------------------------------E--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE
T ss_pred ----------------------------------E--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE
Confidence 3 456899999999999999999999998886 8889999999
Q ss_pred cCCceEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCe
Q psy12697 531 QSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGS 597 (602)
Q Consensus 531 s~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~ 597 (602)
+++ .+++++.||.|++||+.+++.+..+.....+ ...+.|.+++|+|++.+||+++.||+
T Consensus 371 ~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 371 NKN-FVITSSDDGTVKLWDLKTGEFIRNLVTLESG------GSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp CSS-EEEEEETTSEEEEEETTTCCEEEEEEECTTG------GGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred CCC-EEEEEeCCCeEEEEECCCCceeeeeeccccC------CCCceEEEEEecCCEEEEEEcccCCC
Confidence 643 9999999999999999998887776321111 12477999999999999999999997
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.4e-39 Score=317.08 Aligned_cols=316 Identities=16% Similarity=0.181 Sum_probs=254.4
Q ss_pred eeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccc
Q psy12697 131 ECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEI 210 (602)
Q Consensus 131 ~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (602)
.....+.+|.+.|++++|+| ++|++++.||.|++||+.+++...
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~---------------------------------- 50 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNEN---------------------------------- 50 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCC----------------------------------
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCccccc----------------------------------
Confidence 34567889999999999999 899999999999999998876110
Q ss_pred cCCcceEeeCCCcceEEEEEcCC----C---CEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCC----
Q psy12697 211 PQSKATKLIGHESEVFICAWNPV----K---DFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPS---- 279 (602)
Q Consensus 211 ~~~~~~~l~~h~~~v~~~~~~~~----~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 279 (602)
+......+.+|...|.+++|+|+ + ++|++++.|+.|++|++.++.......... ...+
T Consensus 51 ~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~-----------~~~~~~~~ 119 (397)
T 1sq9_A 51 PKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEK-----------LDLLDSDM 119 (397)
T ss_dssp GGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEE-----------ECCSCTTG
T ss_pred CCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccccccee-----------eccccccc
Confidence 00112456689999999999999 9 999999999999999998766421111111 1112
Q ss_pred -CCceeEEeeC----CCCCe-EEEEeCCCeEEEEcCCC-------ccee-----ec-------ccccCCeEEEEEccCCC
Q psy12697 280 -NKDVTSLDWN----NNGSF-LATGSYDGYARIWTSDG-------SLKS-----TL-------GQHKGPIFALKWNKRGN 334 (602)
Q Consensus 280 -~~~i~~~~~~----~~~~~-l~~~~~dg~i~i~~~~~-------~~~~-----~~-------~~~~~~i~~~~~~~~~~ 334 (602)
...|.+++|+ |++++ |++++.||.|++||+.. .... .+ ..|...|.+++|+|++
T Consensus 120 ~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 198 (397)
T 1sq9_A 120 KKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG- 198 (397)
T ss_dssp GGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-
T ss_pred CCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-
Confidence 3789999999 99999 99999999999999765 3333 44 4588899999999999
Q ss_pred EEEEEecCCcEEEEeCCCCceeEEeee---c---cCCeeeeeccCCC-eEEEeeCC---CeEEEEEcCCCceeeEecc--
Q psy12697 335 YILSAGVDKTTIIWDAASGQCEQQFSF---H---SAPALDVDWQSNT-SFASCSTD---QHIHVCKLHSDKPVKSFEG-- 402 (602)
Q Consensus 335 ~l~~~~~dg~i~~wd~~~~~~~~~~~~---~---~~~~~~~~~~~~~-~~~~~~~~---~~i~i~d~~~~~~~~~~~~-- 402 (602)
++++++.||.|++||+++++.+..+.. | ...+.+++|+|++ .+++++.| +.|++||+.+++.+..+.+
T Consensus 199 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~ 278 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPT 278 (397)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-
T ss_pred eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCc
Confidence 999999999999999999999999988 8 8999999999875 57888888 9999999999999999998
Q ss_pred -----------CCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeec------cccccEEEEEECCCCCCCCCCC
Q psy12697 403 -----------HTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQ------AHNKEIYTIKWSPTGPETSNPN 465 (602)
Q Consensus 403 -----------~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~~~~~ 465 (602)
|...|.+++|+|++++|++++.||.|++||+++++.+..+. .|... ...+
T Consensus 279 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~~~g------- 345 (397)
T 1sq9_A 279 HSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEED------ILAV------- 345 (397)
T ss_dssp -------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGG------CCCB-------
T ss_pred ccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhh------hhcc-------
Confidence 99999999999999999999999999999999998888876 33111 0000
Q ss_pred cceeeeeeeccCCccCCeEEEEEccCC----------CEEEEEeCCCeEEEEeCCCCc
Q psy12697 466 MSLIFILKSTLGQHKGPIFALKWNKRG----------NYILSAGVDKTTIIWDAASGQ 513 (602)
Q Consensus 466 ~~~~~~~~~~~~~~~~~v~~i~~s~~~----------~~l~s~~~dg~i~iwd~~~~~ 513 (602)
.......|...|.+++|+|++ ++|++++.||.|++||+.+|+
T Consensus 346 ------~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 346 ------DEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp ------CTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ------ccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 000122357889999999998 799999999999999998764
No 62
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-38 Score=336.99 Aligned_cols=289 Identities=22% Similarity=0.321 Sum_probs=243.1
Q ss_pred eEeeCCCcceEEEEEcCCC-CEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 216 TKLIGHESEVFICAWNPVK-DFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 216 ~~l~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
..+.+|...|++++|+|++ ++|++|+.|++|++|++............ ....|...|.+++|+|++++
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~-----------~~~~h~~~v~~v~~s~~g~~ 444 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQR-----------RLTGHSHFVEDVVLSSDGQF 444 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEE-----------EEECCSSCEEEEEECTTSSE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccc-----------eecCCCCcEEEEEECCCCCE
Confidence 4578999999999999875 79999999999999999865432211111 12346788999999999999
Q ss_pred EEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEe---eeccCCeeeee
Q psy12697 295 LATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF---SFHSAPALDVD 370 (602)
Q Consensus 295 l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~---~~~~~~~~~~~ 370 (602)
|++|+.||.|++||+. +.....+.+|...|.+++|+|++++|++++.|++|++||.......... ..|...+.++.
T Consensus 445 l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 524 (694)
T 3dm0_A 445 ALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVR 524 (694)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEE
T ss_pred EEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEE
Confidence 9999999999999986 5667788899999999999999999999999999999998755433322 35777899999
Q ss_pred ccCCC---eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccc
Q psy12697 371 WQSNT---SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNK 447 (602)
Q Consensus 371 ~~~~~---~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 447 (602)
|+|++ .+++++.|+.|++||+++.+....+.+|...|++++|+|++++|++|+.||.|++||+++++.+..+..
T Consensus 525 ~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~--- 601 (694)
T 3dm0_A 525 FSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA--- 601 (694)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC---
T ss_pred EeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC---
Confidence 99974 599999999999999999999999999999999999999999999999999999999999887765532
Q ss_pred cEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccC-----
Q psy12697 448 EIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS----- 522 (602)
Q Consensus 448 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----- 522 (602)
...|.+++|+|++.+|++++ ++.|++||+.+++.+..+..+.
T Consensus 602 --------------------------------~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~ 648 (694)
T 3dm0_A 602 --------------------------------NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAE 648 (694)
T ss_dssp --------------------------------SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----
T ss_pred --------------------------------CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccc
Confidence 34567777888888777765 5569999999998887665321
Q ss_pred --------------CCeeEeeecCCc-eEEEeeCCCcEEEeecC
Q psy12697 523 --------------APALDVDWQSNT-SFASCSTDQHIHVCKLH 551 (602)
Q Consensus 523 --------------~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~ 551 (602)
..+++++|+||| +|++|+.||.|++|++.
T Consensus 649 ~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 649 KADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 137889999999 99999999999999974
No 63
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.8e-39 Score=337.70 Aligned_cols=312 Identities=22% Similarity=0.349 Sum_probs=250.3
Q ss_pred eeeeeeeccCCceEEEEECCCC-CeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcccccccc
Q psy12697 131 ECLNTLTRHTEPVYSVAFSPDG-KFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIE 209 (602)
Q Consensus 131 ~~~~~l~~h~~~V~~~~~s~d~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (602)
+....+++|++.|++++|+|++ ++|+||+.|++|+|||+.+.....
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~--------------------------------- 419 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY--------------------------------- 419 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS---------------------------------
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc---------------------------------
Confidence 3445789999999999999865 799999999999999987643210
Q ss_pred ccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeC
Q psy12697 210 IPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWN 289 (602)
Q Consensus 210 ~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 289 (602)
......+.+|...|.+++|+|++++|++++.|++|++||+.++... . ....|...|.+++|+
T Consensus 420 --~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~-----~-----------~~~~h~~~v~~~~~s 481 (694)
T 3dm0_A 420 --GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVST-----R-----------RFVGHTKDVLSVAFS 481 (694)
T ss_dssp --CEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-----E-----------EEECCSSCEEEEEEC
T ss_pred --ccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcce-----e-----------EEeCCCCCEEEEEEe
Confidence 0011467889999999999999999999999999999999876421 1 112467889999999
Q ss_pred CCCCeEEEEeCCCeEEEEcCCCcceeec----ccccCCeEEEEEccCC--CEEEEEecCCcEEEEeCCCCceeEEeeecc
Q psy12697 290 NNGSFLATGSYDGYARIWTSDGSLKSTL----GQHKGPIFALKWNKRG--NYILSAGVDKTTIIWDAASGQCEQQFSFHS 363 (602)
Q Consensus 290 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~----~~~~~~i~~~~~~~~~--~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 363 (602)
|++++|++|+.|+.|++||..+.....+ ..|...|.+++|+|++ ..+++++.|++|++||++++++...+..|.
T Consensus 482 ~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~ 561 (694)
T 3dm0_A 482 LDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHT 561 (694)
T ss_dssp TTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCS
T ss_pred CCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCC
Confidence 9999999999999999999876544433 4688899999999987 589999999999999999999999999999
Q ss_pred CCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEee
Q psy12697 364 APALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDL 442 (602)
Q Consensus 364 ~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 442 (602)
..+.+++|+|++ .+++++.|+.|++||+.+++.+..+.. ...|.+++|+|++.+|++++. +.|++||+++++.+..+
T Consensus 562 ~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~-~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 562 GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAATE-HGIKIWDLESKSIVEDL 639 (694)
T ss_dssp SCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEcC-CCEEEEECCCCCChhhh
Confidence 999999999985 588999999999999999998887764 467999999999988887765 56999999999888877
Q ss_pred ccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCC
Q psy12697 443 QAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 510 (602)
Q Consensus 443 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~ 510 (602)
..+........ ...+. .....+...+++++|+|+|++|++|+.||.|++||+.
T Consensus 640 ~~~~~~~~~~~-~~~~~--------------~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 640 KVDLKAEAEKA-DNSGP--------------AATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCCCC-------------------------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccccccccccc-ccccc--------------ccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 65432111000 00000 0011233457899999999999999999999999985
No 64
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.3e-39 Score=315.76 Aligned_cols=305 Identities=20% Similarity=0.302 Sum_probs=253.7
Q ss_pred eEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCC----
Q psy12697 216 TKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNN---- 291 (602)
Q Consensus 216 ~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---- 291 (602)
..+.+|...|++++|+| ++|++++.||.|++|++.+............ ...|...|.+++|+|+
T Consensus 10 ~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~----------~~~h~~~v~~~~~~~~~~~~ 77 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYS----------HFVHKSGLHHVDVLQAIERD 77 (397)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEE----------EECCTTCEEEEEEEEEEETT
T ss_pred hhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceE----------EecCCCcEEEEEEecccccC
Confidence 55678999999999998 8999999999999999988764332222211 1235788999999999
Q ss_pred C---CeEEEEeCCCeEEEEcCCCcc------eeecccc-----cCCeEEEEEc----cCCCE-EEEEecCCcEEEEeCCC
Q psy12697 292 G---SFLATGSYDGYARIWTSDGSL------KSTLGQH-----KGPIFALKWN----KRGNY-ILSAGVDKTTIIWDAAS 352 (602)
Q Consensus 292 ~---~~l~~~~~dg~i~i~~~~~~~------~~~~~~~-----~~~i~~~~~~----~~~~~-l~~~~~dg~i~~wd~~~ 352 (602)
+ ++|++++.||.|++|++.... ...+..| ...|.+++|+ |++++ |++++.||.|++||+.+
T Consensus 78 g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 157 (397)
T 1sq9_A 78 AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHP 157 (397)
T ss_dssp TEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEES
T ss_pred CccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCc
Confidence 9 999999999999999987433 6777788 5999999999 99999 99999999999999998
Q ss_pred ------CceeE-----Eee-------eccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEecc---C---CCCeE
Q psy12697 353 ------GQCEQ-----QFS-------FHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEG---H---TNEVN 408 (602)
Q Consensus 353 ------~~~~~-----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~---~---~~~i~ 408 (602)
++.+. .+. .+...+.++.|++++.+++++.++.|++||+++++++..+.. | ...|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~ 237 (397)
T 1sq9_A 158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR 237 (397)
T ss_dssp SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEE
T ss_pred cccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccc
Confidence 66665 663 378889999999988888889999999999999999999998 9 99999
Q ss_pred EEEECCCCCEEEEEECC---CeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEE
Q psy12697 409 AIKWDPQGLLLASCSDD---MTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFA 485 (602)
Q Consensus 409 ~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 485 (602)
+++|+|++++|++++.| |.|++||+++++.+..+......-.. ......|...|.+
T Consensus 238 ~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~v~~ 296 (397)
T 1sq9_A 238 SVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQA---------------------SLGEFAHSSWVMS 296 (397)
T ss_dssp EEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-----------------------------CCBSBSSCEEE
T ss_pred eEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccc---------------------cccccccCCcEEE
Confidence 99999999999999999 99999999998887776542110000 0001126778888
Q ss_pred EEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec------cc---------------CCCeeEeeecCCc----------
Q psy12697 486 LKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS------FH---------------SAPALDVDWQSNT---------- 534 (602)
Q Consensus 486 i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~---------------~~~v~~~~~s~~~---------- 534 (602)
++|+|++++|++++.||.|++||+.+++++..+. .| ..+|.+++|+|++
T Consensus 297 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~ 376 (397)
T 1sq9_A 297 LSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLN 376 (397)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTS
T ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccccccc
Confidence 9999999999999999999999999999999998 78 9999999999995
Q ss_pred -eEEEeeCCCcEEEeecCCC
Q psy12697 535 -SFASCSTDQHIHVCKLHSD 553 (602)
Q Consensus 535 -~l~~~~~d~~i~iw~~~~~ 553 (602)
.|++++.||.|++|++.++
T Consensus 377 ~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 377 ESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CEEEEEETTTEEEEEEEEC-
T ss_pred ceEEEecCCCcEEEEEcCCC
Confidence 8999999999999998765
No 65
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.2e-38 Score=318.20 Aligned_cols=317 Identities=22% Similarity=0.330 Sum_probs=261.9
Q ss_pred eEeeCCCcce-EEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 216 TKLIGHESEV-FICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 216 ~~l~~h~~~v-~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
..+.+|...+ .++.+ ++++|++|+.||+|++||+.+++... ....|...|.+++|+|++ .
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~----------------~~~~h~~~V~~l~~~~~~-~ 175 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLL----------------QLSGHDGGVWALKYAHGG-I 175 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEE----------------EECCCSSCEEEEEECSTT-E
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEE----------------EEeCCCcCEEEEEEcCCC-E
Confidence 5678898885 55555 57899999999999999998764211 112467899999999988 9
Q ss_pred EEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEc--cCCCEEEEEecCCcEEEEeCCCCce----------------
Q psy12697 295 LATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWN--KRGNYILSAGVDKTTIIWDAASGQC---------------- 355 (602)
Q Consensus 295 l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~dg~i~~wd~~~~~~---------------- 355 (602)
+++|+.||.|++||++ +.....+..|...|.+++|+ ++++++++++.||.|++||+.++..
T Consensus 176 l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 255 (464)
T 3v7d_B 176 LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHT 255 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESC
T ss_pred EEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeec
Confidence 9999999999999987 66777888999999999998 5778999999999999999988753
Q ss_pred -------eEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeE
Q psy12697 356 -------EQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTL 428 (602)
Q Consensus 356 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 428 (602)
...+..|...+.++.. .+..+++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++|+.||.|
T Consensus 256 ~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i 334 (464)
T 3v7d_B 256 PEENPYFVGVLRGHMASVRTVSG-HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTI 334 (464)
T ss_dssp GGGCTTEEEEECCCSSCEEEEEE-ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred cCCCeEEEEEccCccceEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Confidence 3345556666776642 35679999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEe
Q psy12697 429 KIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 508 (602)
Q Consensus 429 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd 508 (602)
++||+++++++..+..|...+.++.| + +++|++++.||.|++||
T Consensus 335 ~vwd~~~~~~~~~~~~h~~~v~~~~~----------------------------------~--~~~l~s~s~dg~v~vwd 378 (464)
T 3v7d_B 335 RIWDLENGELMYTLQGHTALVGLLRL----------------------------------S--DKFLVSAAADGSIRGWD 378 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEE----------------------------------C--SSEEEEEETTSEEEEEE
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEE----------------------------------c--CCEEEEEeCCCcEEEEE
Confidence 99999999988888776665555554 3 36899999999999999
Q ss_pred CCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceee-eecccccceEEEEecCCcEEEEEECCCC
Q psy12697 509 AASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKS-FEGHTTGQLVHSYKGTGGIFEVCWNSRG 586 (602)
Q Consensus 509 ~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~spdg 586 (602)
+.++....... +...+..++|+|++ .+++++ ||.|++||+.+++.+.. +..+ .+.|.+++|+ ++
T Consensus 379 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~-----------~~~v~~v~~~-~~ 444 (464)
T 3v7d_B 379 ANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKD-----------ADQIWSVNFK-GK 444 (464)
T ss_dssp TTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTT-----------CSEEEEEEEE-TT
T ss_pred CCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccC-----------CCcEEEEEec-CC
Confidence 99988766654 67778889999999 777777 99999999999988765 3333 3679999997 45
Q ss_pred CeEEEeccCCeEEeeC
Q psy12697 587 DKVGASASDGSVFKNV 602 (602)
Q Consensus 587 ~~l~~~~~dg~v~i~v 602 (602)
.++++++.||.+.+++
T Consensus 445 ~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 445 TLVAAVEKDGQSFLEI 460 (464)
T ss_dssp EEEEEEEETTEEEEEE
T ss_pred EEEEEEEeCCeEEEEE
Confidence 5666667788877653
No 66
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-38 Score=316.86 Aligned_cols=323 Identities=14% Similarity=0.173 Sum_probs=263.0
Q ss_pred eccceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCC
Q psy12697 118 HRLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPN 197 (602)
Q Consensus 118 ~~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (602)
.++.|++||+.+++....+..| ..+....|+|++++|++++.|+.|++||+.+++...
T Consensus 76 ~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--------------------- 133 (420)
T 3vl1_A 76 LDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQRE--------------------- 133 (420)
T ss_dssp ETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEE---------------------
T ss_pred cCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceee---------------------
Confidence 3679999999999998888887 555666889999999999999999999999887653
Q ss_pred CCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCccc
Q psy12697 198 PPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEV 277 (602)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (602)
.+.+|...|.+++|+|++++|++++.|+.|++||+.+++.... ..
T Consensus 134 -------------------~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~----------------~~ 178 (420)
T 3vl1_A 134 -------------------IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRT----------------LI 178 (420)
T ss_dssp -------------------ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEE----------------EE
T ss_pred -------------------ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceE----------------Ec
Confidence 3357999999999999999999999999999999987764311 12
Q ss_pred CCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-Ccceeecc---cccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCC
Q psy12697 278 PSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTLG---QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG 353 (602)
Q Consensus 278 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 353 (602)
.|...|.+++|+|++++|++++.||.|++||+. ++....+. .+...+.+++|.+.+...
T Consensus 179 ~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~----------------- 241 (420)
T 3vl1_A 179 GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ----------------- 241 (420)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS-----------------
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce-----------------
Confidence 357889999999999999999999999999987 45555554 466788888887764322
Q ss_pred ceeEEeeeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEec-cCCCCeEEEEECCCCC-EEEEEECCCeEEE
Q psy12697 354 QCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFE-GHTNEVNAIKWDPQGL-LLASCSDDMTLKI 430 (602)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i 430 (602)
....+...+.+++|+|++ .+++++.||.|++||+++++.+..+. .|...|.+++|+|+++ +|++|+.||.|++
T Consensus 242 ----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~v 317 (420)
T 3vl1_A 242 ----LHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQ 317 (420)
T ss_dssp ----CGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred ----eeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEE
Confidence 122345678889999986 57888999999999999988776664 4788999999999999 9999999999999
Q ss_pred EeCCCCee-eEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeC
Q psy12697 431 WSLDKDNC-VHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA 509 (602)
Q Consensus 431 wd~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~ 509 (602)
||+++++. +..+..+ |...|.++.+ +++++|++++.||.|++||+
T Consensus 318 wd~~~~~~~~~~~~~~---------------------------------~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 318 WDLRSPECPVGEFLIN---------------------------------EGTPINNVYF-AAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp EETTCTTSCSEEEEES---------------------------------TTSCEEEEEE-ETTEEEEEETTTEEEEEEEE
T ss_pred EEcCCCcCchhhhhcc---------------------------------CCCCceEEEe-CCCCEEEEecCCccEEEEec
Confidence 99998643 4444432 3445666644 47789999999999999998
Q ss_pred CCC---------ceeeeecccCCCeeEeeecCCce----EEEeeCCCcEEEeecCC
Q psy12697 510 ASG---------QCEQQFSFHSAPALDVDWQSNTS----FASCSTDQHIHVCKLHS 552 (602)
Q Consensus 510 ~~~---------~~~~~~~~~~~~v~~~~~s~~~~----l~~~~~d~~i~iw~~~~ 552 (602)
... .....+..|...|.+++|+|++. +++++.+|.+.+|++++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 364 SDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred cCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 873 22234556888999999999985 99999999999999754
No 67
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=308.67 Aligned_cols=296 Identities=14% Similarity=0.278 Sum_probs=234.9
Q ss_pred eeeeccCCceEEEEECCCCC-eEEEeeC---CceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcccccccc
Q psy12697 134 NTLTRHTEPVYSVAFSPDGK-FLASGSF---DKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIE 209 (602)
Q Consensus 134 ~~l~~h~~~V~~~~~s~d~~-~l~s~~~---d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (602)
+.+++|...|.+++|+|++. ++++++. |+.|+|||+.+++....
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~-------------------------------- 59 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLL-------------------------------- 59 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEE--------------------------------
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccce--------------------------------
Confidence 45578999999999999996 4556665 99999999998876532
Q ss_pred ccCCcceEeeCCCcceEEEEEcCC---CCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEE
Q psy12697 210 IPQSKATKLIGHESEVFICAWNPV---KDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSL 286 (602)
Q Consensus 210 ~~~~~~~~l~~h~~~v~~~~~~~~---~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 286 (602)
...+|...|.+++|+|+ +++|++++.||.|++||+.++... .. ....|...|.++
T Consensus 60 -------~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----~~-----------~~~~~~~~v~~~ 117 (357)
T 3i2n_A 60 -------REIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMP----VY-----------SVKGHKEIINAI 117 (357)
T ss_dssp -------EEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSC----SE-----------EECCCSSCEEEE
T ss_pred -------eeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCcc----EE-----------EEEecccceEEE
Confidence 22368999999999998 699999999999999999877511 11 112356889999
Q ss_pred ------eeCCCCCeEEEEeCCCeEEEEcCCCc--ceeecccccC----CeEEEE----EccCCCEEEEEecCCcEEEEeC
Q psy12697 287 ------DWNNNGSFLATGSYDGYARIWTSDGS--LKSTLGQHKG----PIFALK----WNKRGNYILSAGVDKTTIIWDA 350 (602)
Q Consensus 287 ------~~~~~~~~l~~~~~dg~i~i~~~~~~--~~~~~~~~~~----~i~~~~----~~~~~~~l~~~~~dg~i~~wd~ 350 (602)
+|+|++++|++++.||.|++||+... ....+..|.+ .+.+++ |+|+++++++++.||.|++||+
T Consensus 118 ~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~ 197 (357)
T 3i2n_A 118 DGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDL 197 (357)
T ss_dssp EEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEET
T ss_pred eeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEEC
Confidence 56789999999999999999998743 4556655544 788888 7889999999999999999998
Q ss_pred CCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECC---CCCEEEEEECCCe
Q psy12697 351 ASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDP---QGLLLASCSDDMT 427 (602)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~ 427 (602)
++++.. ....|...|.+++|+| ++.+|++++.||.
T Consensus 198 ~~~~~~------------------------------------------~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 235 (357)
T 3i2n_A 198 RNMALR------------------------------------------WETNIKNGVCSLEFDRKDISMNKLVATSLEGK 235 (357)
T ss_dssp TTTEEE------------------------------------------EEEECSSCEEEEEESCSSSSCCEEEEEESTTE
T ss_pred ccCcee------------------------------------------eecCCCCceEEEEcCCCCCCCCEEEEECCCCe
Confidence 875432 1233667899999999 9999999999999
Q ss_pred EEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCC-EEEEEeCCCeEEE
Q psy12697 428 LKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGN-YILSAGVDKTTII 506 (602)
Q Consensus 428 i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~dg~i~i 506 (602)
|++||+++++....+.. ....+|...|.+++|+|+++ +|++++.||.|++
T Consensus 236 i~i~d~~~~~~~~~~~~-----------------------------~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 286 (357)
T 3i2n_A 236 FHVFDMRTQHPTKGFAS-----------------------------VSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHL 286 (357)
T ss_dssp EEEEEEEEEETTTEEEE-----------------------------EEEECCSSCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred EEEEeCcCCCcccceee-----------------------------eccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEE
Confidence 99999987654433321 01234778888899999988 8999999999999
Q ss_pred EeCCCC-------------------ceeeeecccCCCeeEeeecCCc-eEE-EeeCCCcEEEeecCCCC
Q psy12697 507 WDAASG-------------------QCEQQFSFHSAPALDVDWQSNT-SFA-SCSTDQHIHVCKLHSDK 554 (602)
Q Consensus 507 wd~~~~-------------------~~~~~~~~~~~~v~~~~~s~~~-~l~-~~~~d~~i~iw~~~~~~ 554 (602)
||+.++ +++..+..|..+|.+++|+|++ .|+ +++.|+.|++||+.+.+
T Consensus 287 wd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 287 WKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred eecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 999754 3567788899999999999999 777 89999999999987654
No 68
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-38 Score=308.76 Aligned_cols=293 Identities=18% Similarity=0.235 Sum_probs=252.5
Q ss_pred ceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 215 ATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 215 ~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
...+.+|...|.+++|+|++++|++++.||.|++||+.+++... ....|...|.+++|+|++++
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~----------------~~~~h~~~v~~~~~~~~~~~ 88 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLG----------------TLDGHTGTIWSIDVDCFTKY 88 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEE----------------EECCCSSCEEEEEECTTSSE
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhh----------------hhhhcCCcEEEEEEcCCCCE
Confidence 36688999999999999999999999999999999998764321 11235788999999999999
Q ss_pred EEEEeCCCeEEEEcCCC-cceeecccccCCeEEEEEccCCCEEEEEecC-----CcEEEEeCCCCce-----------eE
Q psy12697 295 LATGSYDGYARIWTSDG-SLKSTLGQHKGPIFALKWNKRGNYILSAGVD-----KTTIIWDAASGQC-----------EQ 357 (602)
Q Consensus 295 l~~~~~dg~i~i~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~~-----------~~ 357 (602)
|++++.||.|++||+.. .....+. +...+.+++|+|+++++++++.+ +.|.+||+..... ..
T Consensus 89 l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~ 167 (369)
T 3zwl_B 89 CVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIH 167 (369)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceee
Confidence 99999999999999874 4444444 88999999999999999999998 9999999887643 23
Q ss_pred EeeeccC--CeeeeeccCCC-eEEEeeCCCeEEEEEcCC-CceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeC
Q psy12697 358 QFSFHSA--PALDVDWQSNT-SFASCSTDQHIHVCKLHS-DKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSL 433 (602)
Q Consensus 358 ~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 433 (602)
.+..+.. .+.+++|++++ .+++++.+|.|++||+.+ .+.+..+..|...|.+++|+|++++|++++.||.|++||+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 247 (369)
T 3zwl_B 168 KIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDV 247 (369)
T ss_dssp EEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEEC
Confidence 3344444 88999999875 688899999999999998 7888999999999999999999999999999999999999
Q ss_pred CCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCC-----------
Q psy12697 434 DKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDK----------- 502 (602)
Q Consensus 434 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg----------- 502 (602)
++++.+..+. +...+..++|+|+++++++++.++
T Consensus 248 ~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 292 (369)
T 3zwl_B 248 STLQVLKKYE-----------------------------------TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANE 292 (369)
T ss_dssp TTCCEEEEEE-----------------------------------CSSCEEEEEECSSSSEEEEEECCC-----------
T ss_pred CCCceeeeec-----------------------------------CCCCceeEEecCCCceEEEeecCCCceEEEEecCC
Confidence 9887776654 345567777888899999999888
Q ss_pred ---eEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeee
Q psy12697 503 ---TTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSF 559 (602)
Q Consensus 503 ---~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~ 559 (602)
.+++||..+++.+..+.+|...|.+++|+|++ +|++++.||.|++|+++.+.....+
T Consensus 293 ~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 353 (369)
T 3zwl_B 293 GKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKY 353 (369)
T ss_dssp --CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCCC
T ss_pred CcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccchhHH
Confidence 89999999999999999999999999999999 9999999999999999876544433
No 69
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.2e-39 Score=312.85 Aligned_cols=323 Identities=17% Similarity=0.196 Sum_probs=251.6
Q ss_pred eeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCce--eEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCC
Q psy12697 136 LTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQ--LVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQS 213 (602)
Q Consensus 136 l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (602)
+..|.++|++++|+|++++|++++.|+.|++||+.+++ .+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~-------------------------------------- 45 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQV-------------------------------------- 45 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEE--------------------------------------
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEee--------------------------------------
Confidence 45699999999999999999999999999999998886 44
Q ss_pred cceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCC
Q psy12697 214 KATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGS 293 (602)
Q Consensus 214 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 293 (602)
..+.+|...|.+++|+|++++|++++.||.|++||+.+++... . . ....+...|.+++|+|+++
T Consensus 46 --~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~------~--~------~~~~~~~~v~~~~~~~~~~ 109 (372)
T 1k8k_C 46 --HELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP------T--L------VILRINRAARCVRWAPNEK 109 (372)
T ss_dssp --EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE------E--E------ECCCCSSCEEEEEECTTSS
T ss_pred --eeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeee------e--E------EeecCCCceeEEEECCCCC
Confidence 4456799999999999999999999999999999997653210 0 0 1123567899999999999
Q ss_pred eEEEEeCCCeEEEEcCCCcc-----eeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeC------------------
Q psy12697 294 FLATGSYDGYARIWTSDGSL-----KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA------------------ 350 (602)
Q Consensus 294 ~l~~~~~dg~i~i~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~------------------ 350 (602)
+|++++.||.|++|+++... ......|...|.+++|+|++++|++++.||.|++||+
T Consensus 110 ~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~ 189 (372)
T 1k8k_C 110 KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKM 189 (372)
T ss_dssp EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCC
T ss_pred EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccccccccccc
Confidence 99999999999999987432 3334678999999999999999999999999999995
Q ss_pred CCCceeEEeeeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEE
Q psy12697 351 ASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLK 429 (602)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 429 (602)
..++.+..+..+...+.++.|+|++ .+++++.|+.|++||+++++++..+..|...|.+++|+|++++|+++ .|+.|+
T Consensus 190 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~ 268 (372)
T 1k8k_C 190 PFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPV 268 (372)
T ss_dssp CTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCE
T ss_pred chhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEE
Confidence 4678888888899999999999885 68899999999999999999999999999999999999999988887 899999
Q ss_pred EEeCCC--Ce--eeEeeccccccEEEEEECCCCCC-CCCCCccee--eee-eeccCCccCCeEEEEEc-cCC---CEEEE
Q psy12697 430 IWSLDK--DN--CVHDLQAHNKEIYTIKWSPTGPE-TSNPNMSLI--FIL-KSTLGQHKGPIFALKWN-KRG---NYILS 497 (602)
Q Consensus 430 iwd~~~--~~--~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~--~~~-~~~~~~~~~~v~~i~~s-~~~---~~l~s 497 (602)
+|++.+ +. .+..+..+....... ....... ......... ... .....+|..+|++++|. ++| ++|++
T Consensus 269 i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s 347 (372)
T 1k8k_C 269 LFTYDSAAGKLSFGGRLDVPKQSSQRG-LTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCT 347 (372)
T ss_dssp EEEEETTTTEEEECCCCCCC---------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEE
T ss_pred EEEccCcCceEEEeeccCccccchhhh-cchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEE
Confidence 999987 53 222222211110000 0000000 000000000 000 11224899999999966 677 99999
Q ss_pred EeCCCeEEEEeCCCCce
Q psy12697 498 AGVDKTTIIWDAASGQC 514 (602)
Q Consensus 498 ~~~dg~i~iwd~~~~~~ 514 (602)
++.||.|++||+.+++.
T Consensus 348 ~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 348 TGMDGGMSIWDVRSLES 364 (372)
T ss_dssp EETTSEEEEEEHHHHHH
T ss_pred ecCCCceEEEEecChhH
Confidence 99999999999987653
No 70
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-39 Score=327.24 Aligned_cols=309 Identities=16% Similarity=0.116 Sum_probs=223.5
Q ss_pred CCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCC------CCeEEEEeCCCeEE
Q psy12697 232 PVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNN------GSFLATGSYDGYAR 305 (602)
Q Consensus 232 ~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~dg~i~ 305 (602)
|+++.+++++.|++|+||++.+++.... ..... ..+...|.+++|+|+ +.+||+++.||.|+
T Consensus 171 ~~~~~laS~s~D~tI~iWd~~~~~~~~~--~~~~l----------~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~Dgtvr 238 (524)
T 2j04_B 171 EHLEMFDKEKHSSCIQIFKMNTSTLHCV--KVQTI----------VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTIN 238 (524)
T ss_dssp -----------CEEEEEEEEETTTCCEE--EEEEE----------EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEE
T ss_pred hhhhhhccCCCCceEEEEEccCCCCCce--EEEEE----------EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEE
Confidence 3334455567889999999977653210 00001 123577999999996 57999999999999
Q ss_pred EEcCCCcc------------eeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCc-eeEEeeeccCCeeee--e
Q psy12697 306 IWTSDGSL------------KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ-CEQQFSFHSAPALDV--D 370 (602)
Q Consensus 306 i~~~~~~~------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~~~~~~~~~~~~~~~--~ 370 (602)
+||+.... ...+..|...|.+++|+++ ..|++|+.||+|++||++++. ....+..|...|.++ .
T Consensus 239 lWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~ 317 (524)
T 2j04_B 239 FLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTA 317 (524)
T ss_dssp EEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEE
T ss_pred EEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEE
Confidence 99986431 2356789999999999986 489999999999999999774 445678899999999 5
Q ss_pred ccCCC--eEEEeeCCCeEEEEEcCCCceeeEeccCCC--CeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeecccc
Q psy12697 371 WQSNT--SFASCSTDQHIHVCKLHSDKPVKSFEGHTN--EVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHN 446 (602)
Q Consensus 371 ~~~~~--~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 446 (602)
|++++ .+++++.|++|++||+++++....+.+|.. .|.+++|+|+++.|++++.|++|++||++++.++..+.+
T Consensus 318 ~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-- 395 (524)
T 2j04_B 318 YSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS-- 395 (524)
T ss_dssp CCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE--
T ss_pred cCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec--
Confidence 77764 689999999999999999888777777764 588999999999999999999999999998776665544
Q ss_pred ccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc-----c
Q psy12697 447 KEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF-----H 521 (602)
Q Consensus 447 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~ 521 (602)
|.+.|++++|||+|++|++|+.||+|++||+..+ .+..+.. +
T Consensus 396 --------------------------------H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~ 442 (524)
T 2j04_B 396 --------------------------------RETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQK 442 (524)
T ss_dssp --------------------------------CSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CC
T ss_pred --------------------------------CCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCcccee
Confidence 5566777777778899999999999999998754 3332221 1
Q ss_pred CCCeeEeeecCCceEEEeeCCCcEEEeecC-CCCceeeeecccccceEEEEecCCcEEEEEECCCCC---eEEEeccCCe
Q psy12697 522 SAPALDVDWQSNTSFASCSTDQHIHVCKLH-SDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGD---KVGASASDGS 597 (602)
Q Consensus 522 ~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~---~l~~~~~dg~ 597 (602)
...+.+++|+|++.++.... .+.+|+.. ++..+..+.+|. +.|.+|+|+|++. +||+|+.||.
T Consensus 443 ~~~v~~v~~sp~g~~~~~~~--~~~~~~~~~~g~~~~~l~gh~-----------~~V~~Vafsp~~~~~~~lAsg~~~g~ 509 (524)
T 2j04_B 443 SLRLWKWDYSIKDDKYRIDS--SYEVYPLTVNDVSKAKIDAHG-----------INITCTKWNETSAGGKCYAFSNSAGL 509 (524)
T ss_dssp CCEEEECBCCSSSCEEEECC--CCCCCC-------------CC-----------CSCCCEEECCSTTTTTEEEEECTTSE
T ss_pred eeEEEEeccCCCCCeEEccC--CceecccccCCcceeeecCCC-----------ceEEEEECCCCCCccHHHHhhccCce
Confidence 12477999999994333222 34444432 344455555554 7899999999965 9999999999
Q ss_pred EEee
Q psy12697 598 VFKN 601 (602)
Q Consensus 598 v~i~ 601 (602)
|+|.
T Consensus 510 vrlw 513 (524)
T 2j04_B 510 LTLE 513 (524)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 71
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7e-39 Score=312.63 Aligned_cols=292 Identities=16% Similarity=0.278 Sum_probs=241.4
Q ss_pred eeccCCceEEEEECCC----CCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcccccccccc
Q psy12697 136 LTRHTEPVYSVAFSPD----GKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIP 211 (602)
Q Consensus 136 l~~h~~~V~~~~~s~d----~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (602)
..+|.++|++++|+|+ ...+++++.++.|++||+.+++.+..++.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~------------------------------- 62 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS------------------------------- 62 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEE-------------------------------
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeee-------------------------------
Confidence 4589999999999984 45666677777999999998887765542
Q ss_pred CCcceEeeCCCcceEEEEEcCC----CCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEe
Q psy12697 212 QSKATKLIGHESEVFICAWNPV----KDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLD 287 (602)
Q Consensus 212 ~~~~~~l~~h~~~v~~~~~~~~----~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 287 (602)
.....|...|.+++|+|+ +.+|++++.||.|++||+.+++.. . ....|...|.+++
T Consensus 63 ----~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~-----~-----------~~~~~~~~i~~~~ 122 (366)
T 3k26_A 63 ----YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCI-----K-----------HYVGHGNAINELK 122 (366)
T ss_dssp ----EECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEE-----E-----------EEESCCSCEEEEE
T ss_pred ----ccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEe-----e-----------eecCCCCcEEEEE
Confidence 111237788999999999 669999999999999999876431 1 1123578999999
Q ss_pred eCC-CCCeEEEEeCCCeEEEEcCC-Ccceeec---ccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeee-
Q psy12697 288 WNN-NGSFLATGSYDGYARIWTSD-GSLKSTL---GQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF- 361 (602)
Q Consensus 288 ~~~-~~~~l~~~~~dg~i~i~~~~-~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~- 361 (602)
|+| ++++|++++.||.|++||+. +.....+ ..|...|.+++|+|++++|++++.||.|++||+++++....+..
T Consensus 123 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 202 (366)
T 3k26_A 123 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKES 202 (366)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHH
T ss_pred ECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCcccccccee
Confidence 999 99999999999999999987 4555555 68999999999999999999999999999999998765544333
Q ss_pred ---------------------------ccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCce--------------eeEe
Q psy12697 362 ---------------------------HSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKP--------------VKSF 400 (602)
Q Consensus 362 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~--------------~~~~ 400 (602)
+...+.++.|+ +..+++++.|+.|++||+.+.+. +..+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 281 (366)
T 3k26_A 203 YDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRF 281 (366)
T ss_dssp HTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEE
T ss_pred EEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccc
Confidence 78889999998 77899999999999999987644 7788
Q ss_pred ccCCCCeEEEEECCC--CCEEEEEECCCeEEEEeCCCCeeeE----eeccccccEEEEEECCCCCCCCCCCcceeeeeee
Q psy12697 401 EGHTNEVNAIKWDPQ--GLLLASCSDDMTLKIWSLDKDNCVH----DLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKS 474 (602)
Q Consensus 401 ~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (602)
..|...|.+++|+|+ +++|++++.||.|++||+.+++... .+..|
T Consensus 282 ~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~----------------------------- 332 (366)
T 3k26_A 282 DYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHH----------------------------- 332 (366)
T ss_dssp ECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCT-----------------------------
T ss_pred cccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEccc-----------------------------
Confidence 889999999999999 9999999999999999998875432 22221
Q ss_pred ccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC
Q psy12697 475 TLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS 511 (602)
Q Consensus 475 ~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~ 511 (602)
.|...|.+++|+|++++|++++.||.|++||+.+
T Consensus 333 ---~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 333 ---KCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp ---TCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred ---ccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 1367888999999999999999999999999853
No 72
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.7e-38 Score=309.85 Aligned_cols=307 Identities=17% Similarity=0.311 Sum_probs=257.4
Q ss_pred CCCCceeEEeeCCC----CCeEEEEeCCCeEEEEcCC-Ccceeeccc-----ccCCeEEEEEccC----CCEEEEEecCC
Q psy12697 278 PSNKDVTSLDWNNN----GSFLATGSYDGYARIWTSD-GSLKSTLGQ-----HKGPIFALKWNKR----GNYILSAGVDK 343 (602)
Q Consensus 278 ~~~~~i~~~~~~~~----~~~l~~~~~dg~i~i~~~~-~~~~~~~~~-----~~~~i~~~~~~~~----~~~l~~~~~dg 343 (602)
.|...|++++|+|+ ...+++++.++.|++|+.. +.....+.. |...|.+++|+|+ +++|++++.||
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg 95 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG 95 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence 46789999999984 5667777788899999987 444444443 5578999999999 67999999999
Q ss_pred cEEEEeCCCCceeEEeeeccCCeeeeeccC-C-CeEEEeeCCCeEEEEEcCCCceeeEe---ccCCCCeEEEEECCCCCE
Q psy12697 344 TTIIWDAASGQCEQQFSFHSAPALDVDWQS-N-TSFASCSTDQHIHVCKLHSDKPVKSF---EGHTNEVNAIKWDPQGLL 418 (602)
Q Consensus 344 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~i~i~d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~ 418 (602)
.|++||+.+++.+..+..|...+.++.|+| + ..+++++.||.|++||+++++.+..+ .+|...|.+++|+|++++
T Consensus 96 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 175 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEK 175 (366)
T ss_dssp EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSE
T ss_pred EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCE
Confidence 999999999999999999999999999998 5 56899999999999999999988888 789999999999999999
Q ss_pred EEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE
Q psy12697 419 LASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA 498 (602)
Q Consensus 419 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~ 498 (602)
|++++.||.|++||+++++....+.. .+.++|++....................|...|.+++|+ +++|+++
T Consensus 176 l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~ 247 (366)
T 3k26_A 176 IMSCGMDHSLKLWRINSKRMMNAIKE------SYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSK 247 (366)
T ss_dssp EEEEETTSCEEEEESCSHHHHHHHHH------HHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEE
T ss_pred EEEecCCCCEEEEECCCCccccccce------eEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEE
Confidence 99999999999999998776655543 234455555544444444444445666799999999999 7799999
Q ss_pred eCCCeEEEEeCCCCce--------------eeeecccCCCeeEeeecCC--c-eEEEeeCCCcEEEeecCCCCcee----
Q psy12697 499 GVDKTTIIWDAASGQC--------------EQQFSFHSAPALDVDWQSN--T-SFASCSTDQHIHVCKLHSDKPVK---- 557 (602)
Q Consensus 499 ~~dg~i~iwd~~~~~~--------------~~~~~~~~~~v~~~~~s~~--~-~l~~~~~d~~i~iw~~~~~~~~~---- 557 (602)
+.||.|++||+.++.. +..+..|...|.+++|+|+ + +|++++.||.|++||+.++++..
T Consensus 248 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 327 (366)
T 3k26_A 248 SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCT 327 (366)
T ss_dssp CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEE
T ss_pred ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccce
Confidence 9999999999988754 7788889999999999999 8 99999999999999999876543
Q ss_pred eeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 558 SFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
.+.++. ....|.+++|+|++++|++++.||.|+|.
T Consensus 328 ~~~~~~---------~~~~v~~~~~s~~~~~l~s~~~dg~i~iw 362 (366)
T 3k26_A 328 TLTHHK---------CGAAIRQTSFSRDSSILIAVCDDASIWRW 362 (366)
T ss_dssp EECCTT---------CCSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EEcccc---------cCCceEEEEeCCCCCeEEEEeCCCEEEEE
Confidence 333331 13789999999999999999999999874
No 73
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=7.2e-38 Score=307.21 Aligned_cols=284 Identities=15% Similarity=0.227 Sum_probs=232.9
Q ss_pred eEeeCCCcceEEEEEcCCC-CEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC-CCC
Q psy12697 216 TKLIGHESEVFICAWNPVK-DFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN-NGS 293 (602)
Q Consensus 216 ~~l~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~ 293 (602)
..+.+|...|.+++|+|++ ++|++++.||.|++||+.++...... ....|...|.+++|+| +++
T Consensus 67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--------------~~~~h~~~v~~~~~~~~~~~ 132 (383)
T 3ei3_B 67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFI--------------QGMGPGDAITGMKFNQFNTN 132 (383)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEE--------------CCCSTTCBEEEEEEETTEEE
T ss_pred EeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceee--------------ecCCcCCceeEEEeCCCCCC
Confidence 4567899999999999999 99999999999999999876542110 0123678999999999 789
Q ss_pred eEEEEeCCCeEEEEcCCCcceeecccc---cCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeee
Q psy12697 294 FLATGSYDGYARIWTSDGSLKSTLGQH---KGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVD 370 (602)
Q Consensus 294 ~l~~~~~dg~i~i~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~ 370 (602)
+|++++.|+.|++||+.+.....+..+ ...|.+++|+|++++|++++.|+.|++||++ ++
T Consensus 133 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~---------------- 195 (383)
T 3ei3_B 133 QLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH---------------- 195 (383)
T ss_dssp EEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC----------------
T ss_pred EEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC----------------
Confidence 999999999999999998776666544 4789999999999999999999999999973 22
Q ss_pred ccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCC-EEEEEECCCeEEEEeCCCC----eeeEeeccc
Q psy12697 371 WQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGL-LLASCSDDMTLKIWSLDKD----NCVHDLQAH 445 (602)
Q Consensus 371 ~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~----~~~~~~~~~ 445 (602)
++..+.+|...|.+++|+|+++ +|++++.|+.|++||+++. ..+..+
T Consensus 196 -------------------------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--- 247 (383)
T 3ei3_B 196 -------------------------EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM--- 247 (383)
T ss_dssp -------------------------EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE---
T ss_pred -------------------------EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe---
Confidence 2344567888999999999999 9999999999999999873 222222
Q ss_pred cccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeeecccC--
Q psy12697 446 NKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFHS-- 522 (602)
Q Consensus 446 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-- 522 (602)
+|...|.+++|+| ++++|++++.|+.|++||+.+++....+..|.
T Consensus 248 --------------------------------~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 295 (383)
T 3ei3_B 248 --------------------------------PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHR 295 (383)
T ss_dssp --------------------------------ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBC
T ss_pred --------------------------------cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccc
Confidence 2667888889999 99999999999999999999998877776553
Q ss_pred ---------------CCeeEeeecCCceEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCC
Q psy12697 523 ---------------APALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGD 587 (602)
Q Consensus 523 ---------------~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~ 587 (602)
..+..++|+|++.+ +++.|+.|++||+.+++++..+.++. ..+.+..++|+|+|+
T Consensus 296 ~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~~---------~~~~~~~~~~s~~g~ 365 (383)
T 3ei3_B 296 QFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRDPN---------AAGIISLNKFSPTGD 365 (383)
T ss_dssp CCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEECBTT---------BCSCCCEEEECTTSS
T ss_pred ccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeecCCC---------CCceEEEEEEecCcc
Confidence 33445777777744 88899999999999998888877643 125577789999999
Q ss_pred eEEEeccCCeEEee
Q psy12697 588 KVGASASDGSVFKN 601 (602)
Q Consensus 588 ~l~~~~~dg~v~i~ 601 (602)
+|++++ ||.|+|+
T Consensus 366 ~l~s~s-d~~i~iw 378 (383)
T 3ei3_B 366 VLASGM-GFNILIW 378 (383)
T ss_dssp EEEEEE-TTEEEEE
T ss_pred EEEEec-CCcEEEE
Confidence 999996 8999874
No 74
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-37 Score=296.91 Aligned_cols=285 Identities=23% Similarity=0.352 Sum_probs=244.9
Q ss_pred ceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 215 ATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 215 ~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
...+.+|...|.+++| |++++|++++.||.|++||+.++... .. ...+...|.+++|+|++++
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~-----~~-----------~~~~~~~v~~~~~~~~~~~ 73 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLG-----TV-----------VYTGQGFLNSVCYDSEKEL 73 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEE-----EE-----------EEECSSCEEEEEEETTTTE
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEE-----EE-----------eecCCccEEEEEECCCCCE
Confidence 3667899999999999 99999999999999999999664321 11 1124688999999999999
Q ss_pred EEEEeCCCeEEEEcCCC----cceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeee
Q psy12697 295 LATGSYDGYARIWTSDG----SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVD 370 (602)
Q Consensus 295 l~~~~~dg~i~i~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~ 370 (602)
+++++.||.+++|++.. .....+..|...|.++.| +++++++++.||.|++|| .++....+..+...+.++.
T Consensus 74 l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~ 149 (313)
T 3odt_A 74 LLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAK 149 (313)
T ss_dssp EEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEE
T ss_pred EEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEE
Confidence 99999999999999753 446677889999999999 577999999999999999 6778888888999999999
Q ss_pred ccC--CCeEEEeeCCCeEEEEEcCCCceeeEecc-CCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccc
Q psy12697 371 WQS--NTSFASCSTDQHIHVCKLHSDKPVKSFEG-HTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNK 447 (602)
Q Consensus 371 ~~~--~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 447 (602)
|.+ +..+++++.++.|++|| ..+....+.. |...+.+++|+|++. +++++.||.|++||+++++.+..+..|
T Consensus 150 ~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~-- 224 (313)
T 3odt_A 150 VVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGH-- 224 (313)
T ss_dssp EEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECC--
T ss_pred EccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcC--
Confidence 876 57899999999999999 5566677777 889999999999998 999999999999999998888777654
Q ss_pred cEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeE
Q psy12697 448 EIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALD 527 (602)
Q Consensus 448 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 527 (602)
...|.+++|+|++ .|++++.||.|++||+.+++++..+..|..+|.+
T Consensus 225 --------------------------------~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~ 271 (313)
T 3odt_A 225 --------------------------------ESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWS 271 (313)
T ss_dssp --------------------------------SSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEE
T ss_pred --------------------------------CceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEE
Confidence 4455566666677 5899999999999999999999999999999999
Q ss_pred eeecCCceEEEeeCCCcEEEeecCCCCceee
Q psy12697 528 VDWQSNTSFASCSTDQHIHVCKLHSDKPVKS 558 (602)
Q Consensus 528 ~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~ 558 (602)
++|+|++.+++++.||.|++|++++++.+..
T Consensus 272 ~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 272 VDCMSNGDIIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp EEECTTSCEEEEETTSCEEEEESCGGGCCC-
T ss_pred EEEccCCCEEEEeCCCcEEEEeCCCCceeeh
Confidence 9999999778899999999999987765443
No 75
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.3e-39 Score=313.31 Aligned_cols=319 Identities=14% Similarity=0.214 Sum_probs=232.2
Q ss_pred eeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCce--eEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCC
Q psy12697 136 LTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQ--LVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQS 213 (602)
Q Consensus 136 l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (602)
+..|.++|++++|+|++++||+++.|+.|+|||+.++. .+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~-------------------------------------- 48 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHA-------------------------------------- 48 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEEC--------------------------------------
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEE--------------------------------------
Confidence 44577899999999999999999999999999998873 33
Q ss_pred cceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCC
Q psy12697 214 KATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGS 293 (602)
Q Consensus 214 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 293 (602)
..+.+|...|.+++|+|++++|++++.|+.|++||+.++..... .. ....|...|.+++|+|+++
T Consensus 49 --~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~--~~-----------~~~~~~~~v~~~~~~~~~~ 113 (377)
T 3dwl_C 49 --RTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQ--TL-----------VLLRLNRAATFVRWSPNED 113 (377)
T ss_dssp --CCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCC--EE-----------ECCCCSSCEEEEECCTTSS
T ss_pred --EEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceee--ee-----------EecccCCceEEEEECCCCC
Confidence 34567999999999999999999999999999999987751110 00 1223578899999999999
Q ss_pred eEEEEeCCCeEEEEcCCCc----ceeeccc-ccCCeEEEEEccCCCEEEEEecCCcEEEEeCC-----------------
Q psy12697 294 FLATGSYDGYARIWTSDGS----LKSTLGQ-HKGPIFALKWNKRGNYILSAGVDKTTIIWDAA----------------- 351 (602)
Q Consensus 294 ~l~~~~~dg~i~i~~~~~~----~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~----------------- 351 (602)
+|++++.|+.|++||++.. ....+.. |...|.+++|+|++++|++++.|+.|++||+.
T Consensus 114 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 193 (377)
T 3dwl_C 114 KFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRL 193 (377)
T ss_dssp CCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCC
T ss_pred EEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCcccccccccc
Confidence 9999999999999998754 3566666 99999999999999999999999999999985
Q ss_pred -CCceeEEeeeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCce----eeEeccCCCCeEEEEECCCCCEEEEEECC
Q psy12697 352 -SGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKP----VKSFEGHTNEVNAIKWDPQGLLLASCSDD 425 (602)
Q Consensus 352 -~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 425 (602)
.+++...+ .|...+.+++|+|++ .+++++.|+.|++||+.+++. +..+.+|...|.+++|+|++++|++++.+
T Consensus 194 ~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 194 PFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNY 272 (377)
T ss_dssp CEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSS
T ss_pred chhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCC
Confidence 34455556 788899999999986 488999999999999999987 88899999999999999999999999877
Q ss_pred CeEEEEeCCCCe--eeEeecccc---------------ccEEEEEECCCCCCCCCCCcce-eeeeeeccCCccCCeEEEE
Q psy12697 426 MTLKIWSLDKDN--CVHDLQAHN---------------KEIYTIKWSPTGPETSNPNMSL-IFILKSTLGQHKGPIFALK 487 (602)
Q Consensus 426 g~i~iwd~~~~~--~~~~~~~~~---------------~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~i~ 487 (602)
+.+ +|+..... ....+.... .....+.|++............ ..........|...|++++
T Consensus 273 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~ 351 (377)
T 3dwl_C 273 SPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLR 351 (377)
T ss_dssp SEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEE
T ss_pred cEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEe
Confidence 766 66655322 111111110 0022222221111100000000 0011223445999999999
Q ss_pred EccCC-C---EEEEEeCCCeEEEEeC
Q psy12697 488 WNKRG-N---YILSAGVDKTTIIWDA 509 (602)
Q Consensus 488 ~s~~~-~---~l~s~~~dg~i~iwd~ 509 (602)
+.+.. . .|+|++.||.|++||+
T Consensus 352 ~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 352 PYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccCCCCCceEEEEeecCCCcEEEecC
Confidence 76643 3 6999999999999985
No 76
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.3e-37 Score=304.35 Aligned_cols=291 Identities=22% Similarity=0.440 Sum_probs=235.5
Q ss_pred ceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCC
Q psy12697 142 PVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGH 221 (602)
Q Consensus 142 ~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h 221 (602)
.++.|+||++ ++||+|. |++|+|||..+|+.+..+. +.+|
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~--------------------------------------~~~~ 146 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQ--------------------------------------MEQP 146 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEE--------------------------------------CCST
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEE--------------------------------------ecCC
Confidence 4678999986 4777764 9999999999998876543 3468
Q ss_pred CcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCC
Q psy12697 222 ESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYD 301 (602)
Q Consensus 222 ~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 301 (602)
...|++++|+|++++|++|+.||.|++||+.+++... ....|...+.+++++ +..+++|+.|
T Consensus 147 ~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~----------------~~~~h~~~v~~~s~~--~~~l~sgs~d 208 (420)
T 4gga_A 147 GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR----------------NMTSHSARVGSLSWN--SYILSSGSRS 208 (420)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE----------------EECCCSSCEEEEEEE--TTEEEEEETT
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE----------------EEeCCCCceEEEeeC--CCEEEEEeCC
Confidence 8899999999999999999999999999998764321 112356778888775 6799999999
Q ss_pred CeEEEEcCC--CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEE
Q psy12697 302 GYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFAS 379 (602)
Q Consensus 302 g~i~i~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (602)
+.+++|+.. ......+..|...+..+.|+|+++++++++.|+.+++|+..+++...
T Consensus 209 ~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~---------------------- 266 (420)
T 4gga_A 209 GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW---------------------- 266 (420)
T ss_dssp SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCS----------------------
T ss_pred CceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccc----------------------
Confidence 999999976 44566788999999999999999999999999999999988654211
Q ss_pred eeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCC-CEEEEE--ECCCeEEEEeCCCCeeeEeeccccccEEEEEECC
Q psy12697 380 CSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQG-LLLASC--SDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSP 456 (602)
Q Consensus 380 ~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~ 456 (602)
..+.....|...|.+++|+|++ .+++++ +.|+.|++||+.++++...+..
T Consensus 267 ---------------~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~------------ 319 (420)
T 4gga_A 267 ---------------VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA------------ 319 (420)
T ss_dssp ---------------CCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC------------
T ss_pred ---------------eeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc------------
Confidence 1234456688899999999965 455554 4799999999999988776653
Q ss_pred CCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe--CCCeEEEEeCCCCceeeeecccCCCeeEeeecCCc
Q psy12697 457 TGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG--VDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT 534 (602)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~ 534 (602)
...+.++.|+|+++.+++++ .|+.|+|||+.+++++..+.+|.+.|++++|+|||
T Consensus 320 -----------------------~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg 376 (420)
T 4gga_A 320 -----------------------HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG 376 (420)
T ss_dssp -----------------------SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred -----------------------ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 23566777788888888765 78999999999999999999999999999999999
Q ss_pred -eEEEeeCCCcEEEeecCCCCceeeeecc
Q psy12697 535 -SFASCSTDQHIHVCKLHSDKPVKSFEGH 562 (602)
Q Consensus 535 -~l~~~~~d~~i~iw~~~~~~~~~~~~~~ 562 (602)
+|++|+.|++|+|||+....+....+.+
T Consensus 377 ~~l~S~s~D~tvriWdv~~~~~~~~~~~~ 405 (420)
T 4gga_A 377 ATVASAAADETLRLWRCFELDPARRRERE 405 (420)
T ss_dssp SCEEEEETTTEEEEECCSCSSCC------
T ss_pred CEEEEEecCCeEEEEECCCCCccchhhhc
Confidence 9999999999999999877665554433
No 77
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.1e-38 Score=303.34 Aligned_cols=293 Identities=13% Similarity=0.130 Sum_probs=225.9
Q ss_pred CcceEEEEEcCCCCEEEEeeCCC-------cEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 222 ESEVFICAWNPVKDFLASGSGDS-------TARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 222 ~~~v~~~~~~~~~~~l~s~~~dg-------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
..||++++|+|++++|++|+.+. .|++|++.................. ...+...+.+++++ ++.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~------l~~~~~~v~s~~~~--~~~ 85 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFA------LEDNDDSPTAIDAS--KGI 85 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEE------CCTTSCCCCEEEEE--TTE
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEE------ccCCCCceEEEEeC--CCE
Confidence 46899999999999999997644 5999999876543322222222111 12345567777664 446
Q ss_pred EEEEe-----------CCCeEEEEcCCCc--cee--------ecccccCCeEEEEEccCCCEEEEEe--cCCcEEEEeCC
Q psy12697 295 LATGS-----------YDGYARIWTSDGS--LKS--------TLGQHKGPIFALKWNKRGNYILSAG--VDKTTIIWDAA 351 (602)
Q Consensus 295 l~~~~-----------~dg~i~i~~~~~~--~~~--------~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~~wd~~ 351 (602)
+++|. .|+.+++|+.... ... ....+...+.+++|+|||+++++++ .|++|++||++
T Consensus 86 ~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~ 165 (365)
T 4h5i_A 86 ILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPS 165 (365)
T ss_dssp EEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETT
T ss_pred EEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECC
Confidence 66653 4678999986421 111 1123455689999999999987554 68999999999
Q ss_pred CCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceee--EeccCCCCeEEEEECCCCCEEEEEECCC---
Q psy12697 352 SGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVK--SFEGHTNEVNAIKWDPQGLLLASCSDDM--- 426 (602)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg--- 426 (602)
+++++..+. +...|.+++|+|++.+++.+.++.+.+|+..+++.+. ....|...|.+++|+|+++++++++.|+
T Consensus 166 ~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~ 244 (365)
T 4h5i_A 166 DLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKG 244 (365)
T ss_dssp TTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred CCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence 999988876 6678999999999887777778888888888877654 3456888999999999999999999887
Q ss_pred -eEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEE
Q psy12697 427 -TLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTI 505 (602)
Q Consensus 427 -~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~ 505 (602)
.+++|++......... ...+.+|..+|++++|||||++||+|+.|++|+
T Consensus 245 ~~i~~~~~~~~~~~~~~------------------------------~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~ 294 (365)
T 4h5i_A 245 IVLTKISIKSGNTSVLR------------------------------SKQVTNRFKGITSMDVDMKGELAVLASNDNSIA 294 (365)
T ss_dssp EEEEEEEEETTEEEEEE------------------------------EEEEESSCSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred eEEeecccccceeccee------------------------------eeeecCCCCCeEeEEECCCCCceEEEcCCCEEE
Confidence 6888887655432110 112345778889999999999999999999999
Q ss_pred EEeCCCCceeeee-cccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCC
Q psy12697 506 IWDAASGQCEQQF-SFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSD 553 (602)
Q Consensus 506 iwd~~~~~~~~~~-~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~ 553 (602)
|||+.+++++..+ .+|..+|++++|+||| +||+++.|++|+||++...
T Consensus 295 iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 295 LVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999999875 7899999999999999 9999999999999999643
No 78
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.3e-37 Score=300.75 Aligned_cols=296 Identities=21% Similarity=0.343 Sum_probs=240.0
Q ss_pred eeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCC
Q psy12697 134 NTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQS 213 (602)
Q Consensus 134 ~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (602)
....+|...+.+..+++++..+++++.|+.|++||+.+++....+.
T Consensus 85 ~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~---------------------------------- 130 (401)
T 4aez_A 85 LDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAE---------------------------------- 130 (401)
T ss_dssp EECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEE----------------------------------
T ss_pred eeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeee----------------------------------
Confidence 3445676664443333335678899999999999999998775432
Q ss_pred cceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCC
Q psy12697 214 KATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGS 293 (602)
Q Consensus 214 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 293 (602)
..|...|.+++|+|++++|++++.||.|++||+.+++... ....|...|.+++| +++
T Consensus 131 -----~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~----------------~~~~~~~~v~~~~~--~~~ 187 (401)
T 4aez_A 131 -----TDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLR----------------TMAGHQARVGCLSW--NRH 187 (401)
T ss_dssp -----CCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE----------------EECCCSSCEEEEEE--ETT
T ss_pred -----cCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEE----------------EecCCCCceEEEEE--CCC
Confidence 2378899999999999999999999999999998764321 11245788999999 467
Q ss_pred eEEEEeCCCeEEEEcCC--CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeec
Q psy12697 294 FLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDW 371 (602)
Q Consensus 294 ~l~~~~~dg~i~i~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 371 (602)
++++|+.||.|++||++ +.....+..|...|.+++|+|++++|++++.||.|++||+++++....+..+...+.+++|
T Consensus 188 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~ 267 (401)
T 4aez_A 188 VLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAW 267 (401)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEE
T ss_pred EEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEE
Confidence 99999999999999987 4567778899999999999999999999999999999999999999999999999999999
Q ss_pred cCCC--eEEEee--CCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEE--CCCeEEEEeCCCCeeeEeeccc
Q psy12697 372 QSNT--SFASCS--TDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCS--DDMTLKIWSLDKDNCVHDLQAH 445 (602)
Q Consensus 372 ~~~~--~~~~~~--~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~ 445 (602)
+|++ .+++++ .|+.|++||+.+++++..+. +...|.+++|+|++++|++++ .||.|++||+.+++.....
T Consensus 268 ~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~--- 343 (401)
T 4aez_A 268 CPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQV--- 343 (401)
T ss_dssp CTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEE---
T ss_pred CCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEE---
Confidence 9953 455544 79999999999999988886 667899999999999999954 8999999999876544332
Q ss_pred cccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec
Q psy12697 446 NKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS 519 (602)
Q Consensus 446 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 519 (602)
.+.+|...|.+++|+|+|++|++++.||.|++||+.+++.+....
T Consensus 344 -----------------------------~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 344 -----------------------------DIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp -----------------------------EEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred -----------------------------EecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 122467788888999999999999999999999999988775543
No 79
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.8e-37 Score=297.51 Aligned_cols=300 Identities=12% Similarity=0.150 Sum_probs=219.4
Q ss_pred CCceEEEEECCCCCeEEEeeCC-------ceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccC
Q psy12697 140 TEPVYSVAFSPDGKFLASGSFD-------KCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQ 212 (602)
Q Consensus 140 ~~~V~~~~~s~d~~~l~s~~~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (602)
..+|.+++|+||+++||+|+.| +.|++|++..+...... .+..
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~------------------------------~~~~ 63 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKE------------------------------QFHI 63 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHH------------------------------HEEE
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceee------------------------------eeee
Confidence 4589999999999999999754 46999998765321000 0000
Q ss_pred CcceEeeCCCcceEEEEEcCCCCEEEEe-----------eCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCC
Q psy12697 213 SKATKLIGHESEVFICAWNPVKDFLASG-----------SGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNK 281 (602)
Q Consensus 213 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~-----------~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (602)
.....+.+|...|.+++++ ++.++++ +.|+.+++|++...... ....... .......+..
T Consensus 64 ~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~----~~~~~~~---~~~~~~~~~~ 134 (365)
T 4h5i_A 64 LSEFALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQ----LEFLTSV---DFDASTNADD 134 (365)
T ss_dssp EEEEECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTE----EEEEEEE---CSSCCCCTTC
T ss_pred eeEEEccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCce----EEEeeee---ceeecCCccc
Confidence 0013456788888877765 4455554 45788999998765431 1111100 1111122345
Q ss_pred ceeEEeeCCCCCeEEEEe--CCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEE-
Q psy12697 282 DVTSLDWNNNGSFLATGS--YDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ- 358 (602)
Q Consensus 282 ~i~~~~~~~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~- 358 (602)
.+.+++|+|||+++++++ .|+.|++||...........|...|.+++|+|+|+++++++.+ .+.+|+..+++....
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~ 213 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARK 213 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEE
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeee
Confidence 689999999999987554 6899999998754433334588899999999999999999855 577777777766543
Q ss_pred -eeeccCCeeeeeccCCCe-EEEeeCCC----eEEEEEcCCCce----eeEeccCCCCeEEEEECCCCCEEEEEECCCeE
Q psy12697 359 -FSFHSAPALDVDWQSNTS-FASCSTDQ----HIHVCKLHSDKP----VKSFEGHTNEVNAIKWDPQGLLLASCSDDMTL 428 (602)
Q Consensus 359 -~~~~~~~~~~~~~~~~~~-~~~~~~~~----~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 428 (602)
...+...+.+++|+|++. +++++.++ .+..|++..... ...+.+|...|++++|+|+|++||+|+.|+.|
T Consensus 214 ~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V 293 (365)
T 4h5i_A 214 TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSI 293 (365)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCE
T ss_pred ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEE
Confidence 345677899999999865 66676666 688899876643 45677899999999999999999999999999
Q ss_pred EEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEe
Q psy12697 429 KIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 508 (602)
Q Consensus 429 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd 508 (602)
+|||+++++++.++. .+|..+|++++|||||++||+|+.|++|+|||
T Consensus 294 ~iwd~~~~~~~~~~~---------------------------------~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 294 ALVKLKDLSMSKIFK---------------------------------QAHSFAITEVTISPDSTYVASVSAANTIHIIK 340 (365)
T ss_dssp EEEETTTTEEEEEET---------------------------------TSSSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred EEEECCCCcEEEEec---------------------------------CcccCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 999999998877642 23667777888888999999999999999999
Q ss_pred CCCC
Q psy12697 509 AASG 512 (602)
Q Consensus 509 ~~~~ 512 (602)
+...
T Consensus 341 ip~~ 344 (365)
T 4h5i_A 341 LPLN 344 (365)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 9643
No 80
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.3e-36 Score=286.36 Aligned_cols=248 Identities=22% Similarity=0.351 Sum_probs=208.8
Q ss_pred eeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCc--eeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccc
Q psy12697 133 LNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTG--QLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEI 210 (602)
Q Consensus 133 ~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (602)
+..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++ +.+
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~----------------------------------- 46 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLI----------------------------------- 46 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCC-----------------------------------
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEE-----------------------------------
Confidence 3457899999999999999999999999999999998643 222
Q ss_pred cCCcceEeeCCCcceEEEEEcCC--CCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEee
Q psy12697 211 PQSKATKLIGHESEVFICAWNPV--KDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDW 288 (602)
Q Consensus 211 ~~~~~~~l~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 288 (602)
..+.+|..+|.+++|+|+ +++|++++.|++|++||+.++..... . ....|...|.+++|
T Consensus 47 -----~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~---~-----------~~~~h~~~v~~v~~ 107 (297)
T 2pm7_B 47 -----DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQI---A-----------VHAVHSASVNSVQW 107 (297)
T ss_dssp -----EEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCC---E-----------EECCCSSCEEEEEE
T ss_pred -----EEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEE---E-----------EeecCCCceeEEEe
Confidence 556789999999999864 89999999999999999987542111 0 11235678999999
Q ss_pred CCC--CCeEEEEeCCCeEEEEcCCCc---ceeecccccCCeEEEEEccC-------------CCEEEEEecCCcEEEEeC
Q psy12697 289 NNN--GSFLATGSYDGYARIWTSDGS---LKSTLGQHKGPIFALKWNKR-------------GNYILSAGVDKTTIIWDA 350 (602)
Q Consensus 289 ~~~--~~~l~~~~~dg~i~i~~~~~~---~~~~~~~~~~~i~~~~~~~~-------------~~~l~~~~~dg~i~~wd~ 350 (602)
+|+ +.+|++++.||.|++||++.. ....+..|...|.+++|+|+ +++|++++.|+.|++||+
T Consensus 108 ~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~ 187 (297)
T 2pm7_B 108 APHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY 187 (297)
T ss_dssp CCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEE
T ss_pred CcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEE
Confidence 997 899999999999999998743 24566789999999999997 579999999999999999
Q ss_pred CCCc----eeEEeeeccCCeeeeeccCC----CeEEEeeCCCeEEEEEcCCCc---eeeEe--ccCCCCeEEEEECCCCC
Q psy12697 351 ASGQ----CEQQFSFHSAPALDVDWQSN----TSFASCSTDQHIHVCKLHSDK---PVKSF--EGHTNEVNAIKWDPQGL 417 (602)
Q Consensus 351 ~~~~----~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~i~d~~~~~---~~~~~--~~~~~~i~~~~~~~~~~ 417 (602)
++++ ....+..|...|.+++|+|+ ..+++++.|+.|++||+.+.. ....+ ..|...|.+++|+|+++
T Consensus 188 ~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 267 (297)
T 2pm7_B 188 NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN 267 (297)
T ss_dssp ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC
T ss_pred cCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCC
Confidence 8776 55677889999999999997 468999999999999998743 11233 46788999999999999
Q ss_pred EEEEEECCCeEEEEeCC
Q psy12697 418 LLASCSDDMTLKIWSLD 434 (602)
Q Consensus 418 ~l~~~~~dg~i~iwd~~ 434 (602)
+|++++.||.|++|+..
T Consensus 268 ~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 268 VLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CEEEEETTSCEEEEEEC
T ss_pred EEEEEcCCCcEEEEEEC
Confidence 99999999999999976
No 81
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.1e-36 Score=295.70 Aligned_cols=306 Identities=17% Similarity=0.247 Sum_probs=238.4
Q ss_pred CCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCc---ceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCce
Q psy12697 279 SNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGS---LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQC 355 (602)
Q Consensus 279 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 355 (602)
|...|++++|+|++++|++++.||.|++|+.... ....+..|...|.+++|+|++++|++++.||.|++||+.+++.
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 86 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW 86 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCee
Confidence 5688999999999999999999999999998765 6778889999999999999999999999999999999998876
Q ss_pred eEEe--eeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCce----eeEeccCCCCeEEEEECCCCCEEEEEECCCeE
Q psy12697 356 EQQF--SFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKP----VKSFEGHTNEVNAIKWDPQGLLLASCSDDMTL 428 (602)
Q Consensus 356 ~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 428 (602)
.... ..+...+.++.|++++ .+++++.++.|++||+..++. .....+|...|.+++|+|++++|++++.||.|
T Consensus 87 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 166 (372)
T 1k8k_C 87 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKC 166 (372)
T ss_dssp EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCE
Confidence 5544 5578899999999875 688899999999999988763 23336788999999999999999999999999
Q ss_pred EEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEe
Q psy12697 429 KIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 508 (602)
Q Consensus 429 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd 508 (602)
++||++........... +.+.. .. .......+..|...|.+++|+|++++|++++.||.|++||
T Consensus 167 ~~~d~~~~~~~~~~~~~----------~~~~~--~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 230 (372)
T 1k8k_C 167 RIFSAYIKEVEERPAPT----------PWGSK--MP----FGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLAD 230 (372)
T ss_dssp EEEECCCTTTSCCCCCB----------TTBSC--CC----TTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred EEEEccccccccccccc----------ccccc--cc----hhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 99997632210000000 00000 00 0011123346788899999999999999999999999999
Q ss_pred CCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCC--CC--ceeeeecc------------------ccc
Q psy12697 509 AASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHS--DK--PVKSFEGH------------------TTG 565 (602)
Q Consensus 509 ~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~--~~--~~~~~~~~------------------~~~ 565 (602)
+.+++++..+..|..+|.+++|+|++ +++++ .|+.|++|++.+ ++ .+..+..+ ..+
T Consensus 231 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (372)
T 1k8k_C 231 ADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKA 309 (372)
T ss_dssp GGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC
T ss_pred CCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccccc
Confidence 99999999999999999999999999 55555 999999999987 42 11111110 001
Q ss_pred ceE------EEE--ecCCcEEEEEEC-CCC---CeEEEeccCCeEEee
Q psy12697 566 QLV------HSY--KGTGGIFEVCWN-SRG---DKVGASASDGSVFKN 601 (602)
Q Consensus 566 ~~~------~~~--~~~~~i~~l~~s-pdg---~~l~~~~~dg~v~i~ 601 (602)
... ..+ .+...|.+++|. ++| ++|++++.||.|+++
T Consensus 310 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W 357 (372)
T 1k8k_C 310 SSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIW 357 (372)
T ss_dssp ---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEE
T ss_pred ccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEE
Confidence 110 111 235789999966 677 999999999999985
No 82
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.1e-36 Score=286.82 Aligned_cols=282 Identities=20% Similarity=0.411 Sum_probs=226.8
Q ss_pred eEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCC
Q psy12697 143 VYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHE 222 (602)
Q Consensus 143 V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~ 222 (602)
.++|+||+++ +||+| .|++|+|||+.+|+++..++ +.+|.
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~--------------------------------------~~~~~ 67 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQ--------------------------------------MEQPG 67 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEE--------------------------------------CCSTT
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEE--------------------------------------ecCCC
Confidence 4679999986 67765 59999999999999886543 34688
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCC
Q psy12697 223 SEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDG 302 (602)
Q Consensus 223 ~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 302 (602)
..|.+++|+|++++|++|+.||+|++|++.+++... . ...|...+.++. +++..+++++.++
T Consensus 68 ~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~-----~-----------~~~h~~~~~~~~--~~~~~l~s~~~~~ 129 (318)
T 4ggc_A 68 EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR-----N-----------MTSHSARVGSLS--WNSYILSSGSRSG 129 (318)
T ss_dssp CCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-----E-----------EECCSSCEEEEE--EETTEEEEEETTS
T ss_pred CeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE-----E-----------ecCccceEEEee--cCCCEEEEEecCC
Confidence 999999999999999999999999999998765321 1 112345555544 5567999999999
Q ss_pred eEEEEcCC--CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEe
Q psy12697 303 YARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASC 380 (602)
Q Consensus 303 ~i~i~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (602)
.+++|+.. ......+..|...+..+.+++++++|++++.|+.|++||+++++....
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~---------------------- 187 (318)
T 4ggc_A 130 HIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV---------------------- 187 (318)
T ss_dssp EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSC----------------------
T ss_pred ceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccccc----------------------
Confidence 99999976 345567788999999999999999999999999999999987643211
Q ss_pred eCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEE---EEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCC
Q psy12697 381 STDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLL---ASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPT 457 (602)
Q Consensus 381 ~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l---~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 457 (602)
.......+...|.+++++|++..+ ++++.++.|++||...........
T Consensus 188 ---------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-------------- 238 (318)
T 4ggc_A 188 ---------------PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-------------- 238 (318)
T ss_dssp ---------------CSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE--------------
T ss_pred ---------------ceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc--------------
Confidence 123344567788999999976533 456778999999998766554432
Q ss_pred CCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe--CCCeEEEEeCCCCceeeeecccCCCeeEeeecCCc-
Q psy12697 458 GPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG--VDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT- 534 (602)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~- 534 (602)
+...+..+.|+|+++.+++++ .|+.|++||+.+++++..+.+|.+.|++++|+||+
T Consensus 239 ---------------------~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~ 297 (318)
T 4ggc_A 239 ---------------------AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGA 297 (318)
T ss_dssp ---------------------CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred ---------------------ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 345567777888888877654 79999999999999999999999999999999999
Q ss_pred eEEEeeCCCcEEEeecCCCC
Q psy12697 535 SFASCSTDQHIHVCKLHSDK 554 (602)
Q Consensus 535 ~l~~~~~d~~i~iw~~~~~~ 554 (602)
+|++|+.||+|+|||+.+..
T Consensus 298 ~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 298 TVASAAADETLRLWRCFELD 317 (318)
T ss_dssp CEEEEETTTEEEEECCSCCC
T ss_pred EEEEEecCCeEEEEECCCCC
Confidence 99999999999999986543
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-36 Score=298.51 Aligned_cols=288 Identities=19% Similarity=0.341 Sum_probs=237.0
Q ss_pred eeCCCcc--eEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeE
Q psy12697 218 LIGHESE--VFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFL 295 (602)
Q Consensus 218 l~~h~~~--v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 295 (602)
..+|... +.+++|+ +..+++++.|+.|++|++.++.... . ....+...|.+++|+|++++|
T Consensus 87 ~~~~~~~~~~~~~~~s--~~~l~~~~~d~~v~lw~~~~~~~~~------~---------~~~~~~~~v~~v~~s~~~~~l 149 (401)
T 4aez_A 87 APGIIDDYYLNLLDWS--NLNVVAVALERNVYVWNADSGSVSA------L---------AETDESTYVASVKWSHDGSFL 149 (401)
T ss_dssp CTTCCCCTTCBCEEEC--TTSEEEEEETTEEEEEETTTCCEEE------E---------EECCTTCCEEEEEECTTSSEE
T ss_pred CCCCcCCceEEEEeec--CCCEEEEECCCeEEEeeCCCCcEeE------e---------eecCCCCCEEEEEECCCCCEE
Confidence 3366555 4446666 4568889999999999998765321 0 011256889999999999999
Q ss_pred EEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCC-CCceeEEeeeccCCeeeeeccC
Q psy12697 296 ATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA-SGQCEQQFSFHSAPALDVDWQS 373 (602)
Q Consensus 296 ~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~-~~~~~~~~~~~~~~~~~~~~~~ 373 (602)
++|+.||.|++||+. +.....+..|...|.+++|+ +++|++++.||.|++||++ .......+..|...+.++.|++
T Consensus 150 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 227 (401)
T 4aez_A 150 SVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS 227 (401)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT
T ss_pred EEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC
Confidence 999999999999976 66777888999999999994 5799999999999999999 5667788888999999999998
Q ss_pred CC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCC-CEEEEEE--CCCeEEEEeCCCCeeeEeeccccccE
Q psy12697 374 NT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQG-LLLASCS--DDMTLKIWSLDKDNCVHDLQAHNKEI 449 (602)
Q Consensus 374 ~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~i 449 (602)
++ .+++++.|+.|++||+++++++..+..|...|.+++|+|++ .++++++ .|+.|++||+++++.+..+.
T Consensus 228 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~------ 301 (401)
T 4aez_A 228 DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD------ 301 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE------
T ss_pred CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe------
Confidence 75 58899999999999999999999999999999999999976 4556654 69999999999888776653
Q ss_pred EEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE--eCCCeEEEEeCCCCceee--eecccCCCe
Q psy12697 450 YTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA--GVDKTTIIWDAASGQCEQ--QFSFHSAPA 525 (602)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~--~~dg~i~iwd~~~~~~~~--~~~~~~~~v 525 (602)
+...|.+++|+|++++++++ +.||.|++||+.+++... .+.+|...|
T Consensus 302 -----------------------------~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v 352 (401)
T 4aez_A 302 -----------------------------AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRV 352 (401)
T ss_dssp -----------------------------CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCC
T ss_pred -----------------------------CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCE
Confidence 23457778888899999984 489999999999866554 467899999
Q ss_pred eEeeecCCc-eEEEeeCCCcEEEeecCCCCceeee
Q psy12697 526 LDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSF 559 (602)
Q Consensus 526 ~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~ 559 (602)
.+++|+|++ .|++++.||.|++|++.+++.+...
T Consensus 353 ~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 353 LYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp CEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 999999999 9999999999999999888766543
No 84
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.3e-36 Score=302.79 Aligned_cols=280 Identities=19% Similarity=0.224 Sum_probs=221.2
Q ss_pred CCCceeEEeeCC-CCCeEEEEeCCCeEEEEcCCCc---ceeecccccCCeEEEEEcc-CCCEEEEEecCCcEEEEeCCCC
Q psy12697 279 SNKDVTSLDWNN-NGSFLATGSYDGYARIWTSDGS---LKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASG 353 (602)
Q Consensus 279 ~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~---~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~ 353 (602)
+...|+|++|+| ++++||+|+.||.|++||+... ....+.+|.+.|++++|+| ++++|++++.||+|++||++++
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC
Confidence 467899999999 5679999999999999998632 3345568999999999998 6899999999999999999876
Q ss_pred ceeEEeee--ccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCC-EEEEEECCCeEE
Q psy12697 354 QCEQQFSF--HSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGL-LLASCSDDMTLK 429 (602)
Q Consensus 354 ~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~ 429 (602)
........ ....+.+++|++++ .+++|+.||.|++||++. +.+..+.+|...|.+++|+|++. +|++++.|+.|+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceee
Confidence 54443333 33456788898875 588899999999999864 56778899999999999999876 788999999999
Q ss_pred EEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeC
Q psy12697 430 IWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA 509 (602)
Q Consensus 430 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~ 509 (602)
+||+++.+....+. ...+|...|++++|+|+|++|++++.||.|++||+
T Consensus 277 iwd~~~~~~~~~~~-------------------------------~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~ 325 (435)
T 4e54_B 277 IWDLRQVRGKASFL-------------------------------YSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSA 325 (435)
T ss_dssp EEETTTCCSSSCCS-------------------------------BCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEES
T ss_pred EEecccccccceEE-------------------------------EeeeccccccceeECCCCCeeEEEcCCCEEEEEEC
Confidence 99998765433221 12347888999999999999999999999999999
Q ss_pred CCCceeeeecccCC------CeeEeeecCCc-eEEEee------------CCCcEEEeecCCCCceeeeecccccceEEE
Q psy12697 510 ASGQCEQQFSFHSA------PALDVDWQSNT-SFASCS------------TDQHIHVCKLHSDKPVKSFEGHTTGQLVHS 570 (602)
Q Consensus 510 ~~~~~~~~~~~~~~------~v~~~~~s~~~-~l~~~~------------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 570 (602)
.++++...+..|.. .+....|+|++ .+++++ .++.|++||..+++.+..+....
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~------- 398 (435)
T 4e54_B 326 SQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE------- 398 (435)
T ss_dssp SSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSS-------
T ss_pred CCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCC-------
Confidence 99988877766543 23345666666 444443 34679999998888777654321
Q ss_pred EecCCcEEEE-EECCCCCeEEEeccCCeEEee
Q psy12697 571 YKGTGGIFEV-CWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 571 ~~~~~~i~~l-~~spdg~~l~~~~~dg~v~i~ 601 (602)
...|.++ +|+|||++||+|+ |+.|+|+
T Consensus 399 ---~~~v~s~~~fspdg~~lasg~-d~~i~iW 426 (435)
T 4e54_B 399 ---SSGISSLNEFNPMGDTLASAM-GYHILIW 426 (435)
T ss_dssp ---CCCCCCEEEECTTSSCEEEEC-SSEEEEC
T ss_pred ---CCcEEEEEEECCCCCEEEEEc-CCcEEEE
Confidence 2557776 6999999999876 7788875
No 85
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=293.00 Aligned_cols=288 Identities=13% Similarity=0.190 Sum_probs=233.0
Q ss_pred CCCceeEEeeCCCCCeE-EEEeC---CCeEEEEcCCCcce--eecccccCCeEEEEEccC---CCEEEEEecCCcEEEEe
Q psy12697 279 SNKDVTSLDWNNNGSFL-ATGSY---DGYARIWTSDGSLK--STLGQHKGPIFALKWNKR---GNYILSAGVDKTTIIWD 349 (602)
Q Consensus 279 ~~~~i~~~~~~~~~~~l-~~~~~---dg~i~i~~~~~~~~--~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~~wd 349 (602)
|...|.+++|+|++..+ ++|+. ||.|++|++..... .....|...|.+++|+|+ +++|++++.||.|++||
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd 96 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWN 96 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEEC
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEe
Confidence 67899999999998655 45655 89999999875433 223378999999999998 69999999999999999
Q ss_pred CCCCc-eeEEeeeccCCeeeeec------cCC-CeEEEeeCCCeEEEEEcCCCc-eeeEeccCCC----CeEEEE----E
Q psy12697 350 AASGQ-CEQQFSFHSAPALDVDW------QSN-TSFASCSTDQHIHVCKLHSDK-PVKSFEGHTN----EVNAIK----W 412 (602)
Q Consensus 350 ~~~~~-~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~i~i~d~~~~~-~~~~~~~~~~----~i~~~~----~ 412 (602)
+.+++ ....+..|...+.++.| +++ ..+++++.|+.|++||+.+++ ++..+..|.+ .+.+++ |
T Consensus 97 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 97 LEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp TTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred CCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEecc
Confidence 99988 88889999999999954 555 468999999999999999887 7777776655 789998 7
Q ss_pred CCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEcc--
Q psy12697 413 DPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNK-- 490 (602)
Q Consensus 413 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~-- 490 (602)
+|++++|++++.||.|++||+++++.... .. |...|.+++|+|
T Consensus 177 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~----------------------------------~~~~v~~~~~~~~~ 221 (357)
T 3i2n_A 177 NQEERVVCAGYDNGDIKLFDLRNMALRWE-TN----------------------------------IKNGVCSLEFDRKD 221 (357)
T ss_dssp C-CCCEEEEEETTSEEEEEETTTTEEEEE-EE----------------------------------CSSCEEEEEESCSS
T ss_pred CCCCCEEEEEccCCeEEEEECccCceeee-cC----------------------------------CCCceEEEEcCCCC
Confidence 88999999999999999999998775432 22 456677788888
Q ss_pred -CCCEEEEEeCCCeEEEEeCCCCceeeeec-----ccCCCeeEeeecCCc--eEEEeeCCCcEEEeecCCCCceeeeecc
Q psy12697 491 -RGNYILSAGVDKTTIIWDAASGQCEQQFS-----FHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHSDKPVKSFEGH 562 (602)
Q Consensus 491 -~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~s~~~--~l~~~~~d~~i~iw~~~~~~~~~~~~~~ 562 (602)
++++|++++.||.|++||+.+++....+. +|...|.+++|+|++ ++++++.||.|++||+.++.........
T Consensus 222 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 301 (357)
T 3i2n_A 222 ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSE 301 (357)
T ss_dssp SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTT
T ss_pred CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCC
Confidence 88999999999999999999887766555 899999999999998 6899999999999999876543222110
Q ss_pred c-------ccceEEEEec-CCcEEEEEECCCCCeEE-EeccCCeEEee
Q psy12697 563 T-------TGQLVHSYKG-TGGIFEVCWNSRGDKVG-ASASDGSVFKN 601 (602)
Q Consensus 563 ~-------~~~~~~~~~~-~~~i~~l~~spdg~~l~-~~~~dg~v~i~ 601 (602)
. ....+..+.. .+.|.+++|+|+|++|+ +++.||.|+|.
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw 349 (357)
T 3i2n_A 302 GIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVL 349 (357)
T ss_dssp SCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred CCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEE
Confidence 0 1123334433 57899999999999998 79999999874
No 86
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.5e-36 Score=292.29 Aligned_cols=312 Identities=15% Similarity=0.217 Sum_probs=244.7
Q ss_pred ceeeeecccceeeeeeeccCCceEEEEECCC---CCeEEEeeCCceEEEEecCC-ceeEEEeeccCceEEEEeCCCCCCC
Q psy12697 121 TLPLWDVERGECLNTLTRHTEPVYSVAFSPD---GKFLASGSFDKCVHIWSART-GQLVHSYKGTGGIFEVCWNSRGTPP 196 (602)
Q Consensus 121 ~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d---~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (602)
....|+....+.+..+.+|.+.|++++|+|+ |++|++|+.||.|+|||+.+ +..+.
T Consensus 20 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~-------------------- 79 (368)
T 3mmy_A 20 SATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIP-------------------- 79 (368)
T ss_dssp ---CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEE--------------------
T ss_pred EeccCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeE--------------------
Confidence 3345666777888899999999999999999 69999999999999999987 44331
Q ss_pred CCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcc
Q psy12697 197 NPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTE 276 (602)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (602)
..+.+|...|.+++|+|++++|++++.||.|++||+.++..
T Consensus 80 -------------------~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-------------------- 120 (368)
T 3mmy_A 80 -------------------KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQA-------------------- 120 (368)
T ss_dssp -------------------EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE--------------------
T ss_pred -------------------EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCc--------------------
Confidence 34557889999999999999999999999999998865321
Q ss_pred cCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEE--ccCCCEEEEEecCCcEEEEeCCCCc
Q psy12697 277 VPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKW--NKRGNYILSAGVDKTTIIWDAASGQ 354 (602)
Q Consensus 277 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~~wd~~~~~ 354 (602)
.....|...|.+++| +|++++|++++.||.|++||+++++
T Consensus 121 --------------------------------------~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 121 --------------------------------------IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp --------------------------------------EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred --------------------------------------eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 011247788999999 8899999999999999999999998
Q ss_pred eeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEe--ccCCCCeEEEEECCCCCE----EEEEECCCeE
Q psy12697 355 CEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSF--EGHTNEVNAIKWDPQGLL----LASCSDDMTL 428 (602)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~----l~~~~~dg~i 428 (602)
.+..+..+. .+.++.+.++ .+++++.++.+.+|++......... ..+...+.++++.++... +++++.||.|
T Consensus 163 ~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i 240 (368)
T 3mmy_A 163 PMMVLQLPE-RCYCADVIYP-MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV 240 (368)
T ss_dssp CSEEEECSS-CEEEEEEETT-EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEE
T ss_pred EEEEEecCC-CceEEEecCC-eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcE
Confidence 888887654 5556665544 6788888999999999876543322 223445666666665544 9999999999
Q ss_pred EEEeCCCC---eeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEE
Q psy12697 429 KIWSLDKD---NCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTI 505 (602)
Q Consensus 429 ~iwd~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~ 505 (602)
++||++.. ..+..+..|...... .....|..+|.+++|+|++++|++++.||.|+
T Consensus 241 ~i~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~ 298 (368)
T 3mmy_A 241 AIHYINPPNPAKDNFTFKCHRSNGTN----------------------TSAPQDIYAVNGIAFHPVHGTLATVGSDGRFS 298 (368)
T ss_dssp EEEESSCSCHHHHSEEEECSEEC--------------------------CCCEEECCEEEEEECTTTCCEEEEETTSCEE
T ss_pred EEEecCCCCccccceeeeeeeccccc----------------------ccccccccceEEEEEecCCCEEEEEccCCeEE
Confidence 99999876 445555554332110 11234566899999999999999999999999
Q ss_pred EEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCC
Q psy12697 506 IWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSD 553 (602)
Q Consensus 506 iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~ 553 (602)
+||+.+++++..+..|..+|.+++|+|++ +|++++.|+..+.|++.+.
T Consensus 299 iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 299 FWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNP 347 (368)
T ss_dssp EEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCCT
T ss_pred EEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccccCC
Confidence 99999999999999999999999999999 9999999987776665443
No 87
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-37 Score=304.15 Aligned_cols=281 Identities=14% Similarity=0.183 Sum_probs=223.0
Q ss_pred eeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCC--CCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeE
Q psy12697 218 LIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDST--KKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFL 295 (602)
Q Consensus 218 l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 295 (602)
...+..+|.+++|+|++++|++++.|+.|++||+.++. ... ....|...|.+++|+|++++|
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~----------------~~~~h~~~v~~~~~s~~~~~l 70 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR----------------TFSDHDKIVTCVDWAPKSNRI 70 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECC----------------CBCCCSSCEEEEEECTTTCCE
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEE----------------EEecCCceEEEEEEeCCCCEE
Confidence 34467899999999999999999999999999998652 111 123467899999999999999
Q ss_pred EEEeCCCeEEEEcCCCc----ceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCc---eeEEeee-ccCCee
Q psy12697 296 ATGSYDGYARIWTSDGS----LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ---CEQQFSF-HSAPAL 367 (602)
Q Consensus 296 ~~~~~dg~i~i~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~---~~~~~~~-~~~~~~ 367 (602)
++++.||.|++||+... ....+..|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |...+.
T Consensus 71 ~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~ 150 (377)
T 3dwl_C 71 VTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTIL 150 (377)
T ss_dssp EEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEE
T ss_pred EEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeE
Confidence 99999999999998754 366778899999999999999999999999999999999887 4667776 899999
Q ss_pred eeeccCCC-eEEEeeCCCeEEEEEcC------------------CCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeE
Q psy12697 368 DVDWQSNT-SFASCSTDQHIHVCKLH------------------SDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTL 428 (602)
Q Consensus 368 ~~~~~~~~-~~~~~~~~~~i~i~d~~------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 428 (602)
+++|+|++ .+++++.|+.|++||+. .++++..+ +|...|.+++|+|++++|++++.||.|
T Consensus 151 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i 229 (377)
T 3dwl_C 151 SLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSV 229 (377)
T ss_dssp EEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEE
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcE
Confidence 99999985 58899999999999985 24455666 899999999999999999999999999
Q ss_pred EEEeCCCCee----eEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeE
Q psy12697 429 KIWSLDKDNC----VHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTT 504 (602)
Q Consensus 429 ~iwd~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i 504 (602)
++||+.+++. +..+ ..|..+|.+++|+|++++|++++.++.+
T Consensus 230 ~iwd~~~~~~~~~~~~~~----------------------------------~~~~~~v~~~~~s~~~~~l~~~~~~~~~ 275 (377)
T 3dwl_C 230 TIAYPSAPEQPPRALITV----------------------------------KLSQLPLRSLLWANESAIVAAGYNYSPI 275 (377)
T ss_dssp C-CEECSTTSCEEECCCE----------------------------------ECSSSCEEEEEEEETTEEEEEESSSSEE
T ss_pred EEEECCCCCCcceeeEee----------------------------------cCCCCceEEEEEcCCCCEEEEEcCCcEE
Confidence 9999998765 3333 3466778888888899999998877766
Q ss_pred EEEeCCCCc--ee----------------------------------e----------------eecccCCCeeEeeecC
Q psy12697 505 IIWDAASGQ--CE----------------------------------Q----------------QFSFHSAPALDVDWQS 532 (602)
Q Consensus 505 ~iwd~~~~~--~~----------------------------------~----------------~~~~~~~~v~~~~~s~ 532 (602)
+|+..... .. . ....|.+.|+++++.+
T Consensus 276 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~ 354 (377)
T 3dwl_C 276 -LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYA 354 (377)
T ss_dssp -EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEE
T ss_pred -EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccC
Confidence 66554211 00 0 0112889999999866
Q ss_pred Cc-----eEEEeeCCCcEEEeec
Q psy12697 533 NT-----SFASCSTDQHIHVCKL 550 (602)
Q Consensus 533 ~~-----~l~~~~~d~~i~iw~~ 550 (602)
+. .|++++.||.|++||+
T Consensus 355 ~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 355 GTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EETTEEEEEEEEETTSEEEEECC
T ss_pred CCCCceEEEEeecCCCcEEEecC
Confidence 54 5999999999999985
No 88
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=9.4e-36 Score=296.94 Aligned_cols=277 Identities=23% Similarity=0.459 Sum_probs=227.8
Q ss_pred eeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcc
Q psy12697 136 LTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKA 215 (602)
Q Consensus 136 l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (602)
..+|...|.|++| ++++|++|+.||.|++||+.+++.+.
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~--------------------------------------- 167 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKR--------------------------------------- 167 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEE---------------------------------------
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEE---------------------------------------
Confidence 3467788998887 79999999999999999999988764
Q ss_pred eEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeE
Q psy12697 216 TKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFL 295 (602)
Q Consensus 216 ~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 295 (602)
.+.+|...|.+++| ++++|++|+.||.|++||+.+++.
T Consensus 168 -~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~--------------------------------------- 205 (435)
T 1p22_A 168 -ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM--------------------------------------- 205 (435)
T ss_dssp -EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE---------------------------------------
T ss_pred -EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE---------------------------------------
Confidence 34578899999988 678999999999999999865421
Q ss_pred EEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCcee---EEeeeccCCeeeeecc
Q psy12697 296 ATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE---QQFSFHSAPALDVDWQ 372 (602)
Q Consensus 296 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~---~~~~~~~~~~~~~~~~ 372 (602)
...+..|...|.+++|++ +.+++++.||.|++||+.++... ..+..|...+.++.+
T Consensus 206 ------------------~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~- 264 (435)
T 1p22_A 206 ------------------LNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF- 264 (435)
T ss_dssp ------------------EEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-
T ss_pred ------------------EEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-
Confidence 122335667788888763 47888888888888888877655 556778889999998
Q ss_pred CCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEE
Q psy12697 373 SNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTI 452 (602)
Q Consensus 373 ~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~ 452 (602)
.+..+++++.||.|++||+++++.+..+.+|...|.+++++ ++++++|+.||.|++||+++++++..+..|...+.
T Consensus 265 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~-- 340 (435)
T 1p22_A 265 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR-- 340 (435)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE--
T ss_pred CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEE--
Confidence 66789999999999999999999999999999999999994 67999999999999999999988887776555544
Q ss_pred EECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCc---------eeeeecccCC
Q psy12697 453 KWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ---------CEQQFSFHSA 523 (602)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~ 523 (602)
+++| ++++|++|+.||.|++||+.++. ++..+.+|.+
T Consensus 341 --------------------------------~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~ 386 (435)
T 1p22_A 341 --------------------------------CIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG 386 (435)
T ss_dssp --------------------------------EEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS
T ss_pred --------------------------------EEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCC
Confidence 4444 56789999999999999998776 7888999999
Q ss_pred CeeEeeecCCc-eEEEeeCCCcEEEeecCCCCce
Q psy12697 524 PALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPV 556 (602)
Q Consensus 524 ~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~ 556 (602)
.|.+++| ++ .|++++.||.|++||+.+....
T Consensus 387 ~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~ 418 (435)
T 1p22_A 387 RVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAA 418 (435)
T ss_dssp CCCCEEE--CSSCEEECCSSSEEEEEC-------
T ss_pred CeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCc
Confidence 9999999 56 9999999999999999776543
No 89
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=301.96 Aligned_cols=339 Identities=13% Similarity=0.197 Sum_probs=238.4
Q ss_pred ccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceE
Q psy12697 138 RHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATK 217 (602)
Q Consensus 138 ~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (602)
.|.+.|++++|+|+|++||+|+.||.|+|||+.+++........ .......
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~-----------------------------~~~~~~~ 76 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRG-----------------------------EYNVYST 76 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCC-----------------------------CEEEEEE
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCccccc-----------------------------ceeEecc
Confidence 36899999999999999999999999999999887632100000 0001145
Q ss_pred eeCCC------------cceEEEEEcCCC--CEEEEeeCCCcEEEEeCCCCCCC-------------------CCccceE
Q psy12697 218 LIGHE------------SEVFICAWNPVK--DFLASGSGDSTARIWDMTDSTKK-------------------DPKELQI 264 (602)
Q Consensus 218 l~~h~------------~~v~~~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~-------------------~~~~~~~ 264 (602)
+.+|. ..|.+++|+|++ ..|++++.|++|++|++.++... .......
T Consensus 77 ~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 156 (447)
T 3dw8_B 77 FQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPV 156 (447)
T ss_dssp EECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCE
T ss_pred cccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEecc
Confidence 56787 889999999998 79999999999999998753221 0000000
Q ss_pred EEEE-----EecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-Cc-cee-------ecccccCCeEEEEEc
Q psy12697 265 VLRH-----CISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GS-LKS-------TLGQHKGPIFALKWN 330 (602)
Q Consensus 265 ~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~-~~~-------~~~~~~~~i~~~~~~ 330 (602)
.... ..........|...|.+++|+|++++|++| .||.|++||+. +. ... .+..|...|.+++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (447)
T 3dw8_B 157 FRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFH 235 (447)
T ss_dssp EEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEEC
T ss_pred ccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEEC
Confidence 0000 000001123578899999999999999998 79999999988 32 222 366899999999999
Q ss_pred cCC-CEEEEEecCCcEEEEeCCCCce----eEEeeeccC------------CeeeeeccCCCe-EEEeeCCCeEEEEEcC
Q psy12697 331 KRG-NYILSAGVDKTTIIWDAASGQC----EQQFSFHSA------------PALDVDWQSNTS-FASCSTDQHIHVCKLH 392 (602)
Q Consensus 331 ~~~-~~l~~~~~dg~i~~wd~~~~~~----~~~~~~~~~------------~~~~~~~~~~~~-~~~~~~~~~i~i~d~~ 392 (602)
|++ ++|++++.||.|++||+++++. ...+..+.. .+.+++|+|++. +++++. +.|++||++
T Consensus 236 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~ 314 (447)
T 3dw8_B 236 PNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLN 314 (447)
T ss_dssp SSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETT
T ss_pred CCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCC
Confidence 998 9999999999999999999887 677777765 899999999876 555556 999999999
Q ss_pred C-CceeeEeccCCCC---------------eEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECC
Q psy12697 393 S-DKPVKSFEGHTNE---------------VNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSP 456 (602)
Q Consensus 393 ~-~~~~~~~~~~~~~---------------i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~ 456 (602)
+ ++++..+.+|... +..++|+|++++|++|+.||.|++||+.+++.+ .+..+..........+
T Consensus 315 ~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~ 393 (447)
T 3dw8_B 315 MENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLK 393 (447)
T ss_dssp CCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCC
T ss_pred CCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccC
Confidence 7 8888888888642 234999999999999999999999999988765 3333332211000000
Q ss_pred CCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCC
Q psy12697 457 TGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 510 (602)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~ 510 (602)
....... ..............+...|..++|+|++++||+++.++ +++|..+
T Consensus 394 ~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 394 PRKVCAS-GKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CCCEECS-SCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred Ccccccc-CCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 0000000 00000001111224567899999999999999998877 8888643
No 90
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=6.4e-36 Score=289.59 Aligned_cols=308 Identities=16% Similarity=0.245 Sum_probs=228.0
Q ss_pred eeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCC
Q psy12697 134 NTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQS 213 (602)
Q Consensus 134 ~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (602)
..+.+|.+.|++++|+|++++||+++.||.|++||+.++......
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~----------------------------------- 49 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWEL----------------------------------- 49 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEE-----------------------------------
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCccee-----------------------------------
Confidence 456899999999999999999999999999999999876422111
Q ss_pred cceEeeCCCcceEEEEEcC--CCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCC
Q psy12697 214 KATKLIGHESEVFICAWNP--VKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNN 291 (602)
Q Consensus 214 ~~~~l~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 291 (602)
...+.+|...|.+++|+| ++++|++++.||.|++||+.++.......
T Consensus 50 -~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~------------------------------ 98 (351)
T 3f3f_A 50 -SDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGR------------------------------ 98 (351)
T ss_dssp -EEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSC------------------------------
T ss_pred -cceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccccc------------------------------
Confidence 145678999999999999 68999999999999999998764321000
Q ss_pred CCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccC--CCEEEEEecCCcEEEEeCCCCceeEEee---------
Q psy12697 292 GSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKR--GNYILSAGVDKTTIIWDAASGQCEQQFS--------- 360 (602)
Q Consensus 292 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~~wd~~~~~~~~~~~--------- 360 (602)
.......+..|...|.+++|+|+ +++|++++.||.|++||+++++.+..+.
T Consensus 99 ------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 99 ------------------RWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp ------------------SEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred ------------------CcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 00123344568889999999999 9999999999999999999887654433
Q ss_pred ----eccCCeeeeeccC----CCeEEEeeCCCeEEEEEcCCCce--eeEeccCCCCeEEEEECCCC----CEEEEEECCC
Q psy12697 361 ----FHSAPALDVDWQS----NTSFASCSTDQHIHVCKLHSDKP--VKSFEGHTNEVNAIKWDPQG----LLLASCSDDM 426 (602)
Q Consensus 361 ----~~~~~~~~~~~~~----~~~~~~~~~~~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~----~~l~~~~~dg 426 (602)
.+...+.++.|+| +..+++++.++.+.+|+...++. +..+.+|...|++++|+|++ ++|++++.||
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC
Confidence 3566788999988 46799999999998888887765 77888999999999999998 8999999999
Q ss_pred eEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEE----EEEeCCC
Q psy12697 427 TLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYI----LSAGVDK 502 (602)
Q Consensus 427 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l----~s~~~dg 502 (602)
.|++||++.+................. .++....+ ..+....
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~ 286 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLTNSNMFD----------------------------------NSADVDMDAQGRSDSNTEE 286 (351)
T ss_dssp CEEEEEEEECC---------------------------------------------------------------------
T ss_pred eEEEEeCCCCcCccccCCcccceeccC----------------------------------CCcccccccccccccccce
Confidence 999999987644333222221111111 11122222 3334456
Q ss_pred eEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeee
Q psy12697 503 TTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSF 559 (602)
Q Consensus 503 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~ 559 (602)
.+.+|+....+.+..+.+|...|++++|+|++ +|++++.||.|++|++.+++.+..+
T Consensus 287 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 287 KAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp ----CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred eeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 67888888888999999999999999999999 9999999999999999887655444
No 91
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=8.3e-36 Score=280.77 Aligned_cols=257 Identities=21% Similarity=0.353 Sum_probs=208.0
Q ss_pred eecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCC--CceeEEeeeccCCeeeeeccC---CCeEEEeeCCCeEEEE
Q psy12697 315 STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS--GQCEQQFSFHSAPALDVDWQS---NTSFASCSTDQHIHVC 389 (602)
Q Consensus 315 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~i~ 389 (602)
..+.+|...|.+++|+|+|++|++++.|++|++||+.. .+.+..+..|..+|.+++|++ +..+++++.|+.|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 35678999999999999999999999999999999974 367788899999999999975 4679999999999999
Q ss_pred EcCCCc--eeeEeccCCCCeEEEEECCC--CCEEEEEECCCeEEEEeCCCCee--eEeeccccccEEEEEECCCCCCCCC
Q psy12697 390 KLHSDK--PVKSFEGHTNEVNAIKWDPQ--GLLLASCSDDMTLKIWSLDKDNC--VHDLQAHNKEIYTIKWSPTGPETSN 463 (602)
Q Consensus 390 d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~ 463 (602)
|+.+++ .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||++++.. ...+..|...+.+++|+|+......
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998874 56678889999999999997 89999999999999999987532 3456677777777777775421000
Q ss_pred CCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCc----eeeeecccCCCeeEeeecCC---c-e
Q psy12697 464 PNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ----CEQQFSFHSAPALDVDWQSN---T-S 535 (602)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~---~-~ 535 (602)
.-...+++++|++|+.|+.|++||+.+++ +...+.+|...|.+++|+|+ + +
T Consensus 163 ---------------------~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~ 221 (297)
T 2pm7_B 163 ---------------------EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 221 (297)
T ss_dssp ----------------------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred ---------------------cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceE
Confidence 00012346899999999999999998776 56788899999999999998 4 8
Q ss_pred EEEeeCCCcEEEeecCCCCce---eeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 536 FASCSTDQHIHVCKLHSDKPV---KSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 536 l~~~~~d~~i~iw~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
|++++.|++|++||+++.... ..+... .....|.+++|+|+|++||+++.||.|+|.
T Consensus 222 las~s~D~~v~iWd~~~~~~~~~~~~~~~~---------~~~~~v~~~~~s~~g~~las~~~D~~v~lw 281 (297)
T 2pm7_B 222 MASVSQDRTCIIWTQDNEQGPWKKTLLKEE---------KFPDVLWRASWSLSGNVLALSGGDNKVTLW 281 (297)
T ss_dssp EEEEETTSCEEEEEESSTTSCCEEEESSSS---------CCSSCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred EEEEECCCcEEEEEeCCCCCccceeeeecc---------cCCCcEEEEEECCCCCEEEEEcCCCcEEEE
Confidence 999999999999998764311 111000 124679999999999999999999999875
No 92
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1e-36 Score=289.65 Aligned_cols=248 Identities=26% Similarity=0.395 Sum_probs=204.0
Q ss_pred eeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCc
Q psy12697 135 TLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSK 214 (602)
Q Consensus 135 ~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (602)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+.+++....
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~------------------------------------- 50 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILI------------------------------------- 50 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEE-------------------------------------
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEE-------------------------------------
Confidence 4578999999999999999999999999999999987753211
Q ss_pred ceEeeCCCcceEEEEEcC--CCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCC-
Q psy12697 215 ATKLIGHESEVFICAWNP--VKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNN- 291 (602)
Q Consensus 215 ~~~l~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~- 291 (602)
..+.+|...|.+++|+| ++++|++++.|++|++||+.++.... .. ....|...|.+++|+|+
T Consensus 51 -~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~------~~--------~~~~h~~~V~~v~~~p~~ 115 (316)
T 3bg1_A 51 -ADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEK------SH--------EHAGHDSSVNSVCWAPHD 115 (316)
T ss_dssp -EEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCE------EE--------EECCCSSCCCEEEECCTT
T ss_pred -EEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceE------EE--------EccCCCCceEEEEECCCC
Confidence 45678999999999986 48999999999999999998653211 00 11235688999999997
Q ss_pred -CCeEEEEeCCCeEEEEcCCCcc----eeecccccCCeEEEEEccC-----------------CCEEEEEecCCcEEEEe
Q psy12697 292 -GSFLATGSYDGYARIWTSDGSL----KSTLGQHKGPIFALKWNKR-----------------GNYILSAGVDKTTIIWD 349 (602)
Q Consensus 292 -~~~l~~~~~dg~i~i~~~~~~~----~~~~~~~~~~i~~~~~~~~-----------------~~~l~~~~~dg~i~~wd 349 (602)
+.+|++|+.||.|++|+..... ...+..|...|.+++|+|+ +++|++++.|+.|++||
T Consensus 116 ~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd 195 (316)
T 3bg1_A 116 YGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWK 195 (316)
T ss_dssp TCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEE
T ss_pred CCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEE
Confidence 7899999999999999987531 3456789999999999997 46899999999999999
Q ss_pred CCCC---ceeEEeeeccCCeeeeeccCC-----CeEEEeeCCCeEEEEEcCCCc----eeeEeccCCCCeEEEEECCCCC
Q psy12697 350 AASG---QCEQQFSFHSAPALDVDWQSN-----TSFASCSTDQHIHVCKLHSDK----PVKSFEGHTNEVNAIKWDPQGL 417 (602)
Q Consensus 350 ~~~~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~ 417 (602)
++.. +....+..|...+.+++|+|+ ..+++++.|+.|++|++.+.. ....+..|...|.+++|+|+++
T Consensus 196 ~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~ 275 (316)
T 3bg1_A 196 EEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITAN 275 (316)
T ss_dssp ECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTC
T ss_pred eCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCC
Confidence 9765 456678889999999999997 469999999999999997631 2344567889999999999999
Q ss_pred EEEEEECCCeEEEEeCC
Q psy12697 418 LLASCSDDMTLKIWSLD 434 (602)
Q Consensus 418 ~l~~~~~dg~i~iwd~~ 434 (602)
+|++++.|+.|++|+..
T Consensus 276 ~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 276 ILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CEEEEESSSCEEEEEEC
T ss_pred EEEEEcCCCeEEEEEEC
Confidence 99999999999999976
No 93
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.1e-36 Score=290.85 Aligned_cols=271 Identities=13% Similarity=0.129 Sum_probs=236.9
Q ss_pred CCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcc----eeecccccCCeEEEEEccCCC-EEEEEecCCcEEEEeC-C
Q psy12697 278 PSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSL----KSTLGQHKGPIFALKWNKRGN-YILSAGVDKTTIIWDA-A 351 (602)
Q Consensus 278 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~----~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~wd~-~ 351 (602)
+|...|++++|+|++++|++++.||.|++|++.... ......|...|.+++|+|+++ +|++++.||.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 567899999999999999999999999999987544 556668999999999999999 9999999999999999 7
Q ss_pred CCceeEEeee--ccCCeeeeeccCCCeEEEeeCCCeEEEEEcCC---------CceeeEeccCCCCeEEEEECCCCCEEE
Q psy12697 352 SGQCEQQFSF--HSAPALDVDWQSNTSFASCSTDQHIHVCKLHS---------DKPVKSFEGHTNEVNAIKWDPQGLLLA 420 (602)
Q Consensus 352 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~l~ 420 (602)
+++. ..+.. |...+.++.|+++..+++++.|+.|++||+++ ++++..+. |...|.+++|+|++ ++
T Consensus 89 ~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~ 164 (342)
T 1yfq_A 89 SPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LI 164 (342)
T ss_dssp SSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EE
T ss_pred CCce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EE
Confidence 7755 66777 89999999999977899999999999999988 77777776 88999999999987 99
Q ss_pred EEECCCeEEEEeCCC-CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEcc-CCCEEEEE
Q psy12697 421 SCSDDMTLKIWSLDK-DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNK-RGNYILSA 498 (602)
Q Consensus 421 ~~~~dg~i~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~-~~~~l~s~ 498 (602)
+++.|+.|++||+++ +...... ....|...+.+++|+| ++++++++
T Consensus 165 ~~~~d~~i~i~d~~~~~~~~~~~--------------------------------~~~~~~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 165 VGMNNSQVQWFRLPLCEDDNGTI--------------------------------EESGLKYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp EEESTTEEEEEESSCCTTCCCEE--------------------------------EECSCSSCEEEEEECSGGGCEEEEE
T ss_pred EEeCCCeEEEEECCcccccccee--------------------------------eecCCCCceeEEEECCCCCCEEEEE
Confidence 999999999999987 4321110 1123567788999999 99999999
Q ss_pred eCCCeEEEEeCCCC------ceeeeecccCC---------CeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecc
Q psy12697 499 GVDKTTIIWDAASG------QCEQQFSFHSA---------PALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGH 562 (602)
Q Consensus 499 ~~dg~i~iwd~~~~------~~~~~~~~~~~---------~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~ 562 (602)
+.||.|++|++... +....+..|.. .|.+++|+|++ +|++++.||.|++||+.+++++..+.++
T Consensus 213 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 292 (342)
T 1yfq_A 213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF 292 (342)
T ss_dssp ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC
T ss_pred ecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcc
Confidence 99999999999887 77788888865 99999999999 9999999999999999988888877765
Q ss_pred -cccceEEEEecCCcEEEEEECCCCCeEEEeccCCe
Q psy12697 563 -TTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGS 597 (602)
Q Consensus 563 -~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~ 597 (602)
. +.|.+++ |+|++|++++.||.
T Consensus 293 h~-----------~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 293 NE-----------DSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp SS-----------SEEEEEE--ECSSEEEEEEECTH
T ss_pred cC-----------CCceEec--CCCCeEEEEecCCc
Confidence 4 6799999 99999999999998
No 94
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=6.2e-36 Score=288.75 Aligned_cols=289 Identities=11% Similarity=0.121 Sum_probs=246.2
Q ss_pred eCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCC-eEEE
Q psy12697 219 IGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGS-FLAT 297 (602)
Q Consensus 219 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~ 297 (602)
.+|...|.+++|+|++++|++++.|+.|++|++.++..... ... ...|...|.+++|+|+++ +|++
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~--~~~-----------~~~~~~~v~~~~~~~~~~~~l~~ 74 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVD--LLQ-----------SLRYKHPLLCCNFIDNTDLQIYV 74 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEE--EEE-----------EEECSSCEEEEEEEESSSEEEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcccc--cee-----------eeecCCceEEEEECCCCCcEEEE
Confidence 47999999999999999999999999999999987642100 111 113568899999999999 9999
Q ss_pred EeCCCeEEEEcC-CCcceeeccc--ccCCeEEEEEccCCCEEEEEecCCcEEEEeCCC---------CceeEEeeeccCC
Q psy12697 298 GSYDGYARIWTS-DGSLKSTLGQ--HKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS---------GQCEQQFSFHSAP 365 (602)
Q Consensus 298 ~~~dg~i~i~~~-~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~---------~~~~~~~~~~~~~ 365 (602)
|+.||.|++|++ .......+.. |...|.+++|+| +++|++++.|+.|++||+++ ++++..+. +...
T Consensus 75 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~ 152 (342)
T 1yfq_A 75 GTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNK 152 (342)
T ss_dssp EETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCC
T ss_pred EcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCc
Confidence 999999999999 8777788888 999999999999 99999999999999999987 76666666 7888
Q ss_pred eeeeeccCCCeEEEeeCCCeEEEEEcCC-Cc--eeeEeccCCCCeEEEEECC-CCCEEEEEECCCeEEEEeCCCC-----
Q psy12697 366 ALDVDWQSNTSFASCSTDQHIHVCKLHS-DK--PVKSFEGHTNEVNAIKWDP-QGLLLASCSDDMTLKIWSLDKD----- 436 (602)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~-~~--~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~----- 436 (602)
+.++.|+++. +++++.++.|++||+++ +. .......|...+.+++|+| +++++++++.||.|++|+++..
T Consensus 153 v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~ 231 (342)
T 1yfq_A 153 IFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYN 231 (342)
T ss_dssp EEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTT
T ss_pred eEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccc
Confidence 9999999888 99999999999999998 54 3345556888999999999 9999999999999999999876
Q ss_pred -eeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee
Q psy12697 437 -NCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE 515 (602)
Q Consensus 437 -~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 515 (602)
+....+..|.... .-..|...|.+++|+|++++|++++.||.|++||+.+++++
T Consensus 232 ~~~~~~~~~~~~~~-------------------------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 232 SSKRFAFRCHRLNL-------------------------KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp CTTCEEEECCCCCT-------------------------TCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred cccceeeecccccc-------------------------cccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 5555554443210 01136678999999999999999999999999999999999
Q ss_pred eeeccc-CCCeeEeeecCCc-eEEEeeCCCc-EEEeec
Q psy12697 516 QQFSFH-SAPALDVDWQSNT-SFASCSTDQH-IHVCKL 550 (602)
Q Consensus 516 ~~~~~~-~~~v~~~~~s~~~-~l~~~~~d~~-i~iw~~ 550 (602)
..+..| ..+|.+++ |++ .|++++.||. .+.|..
T Consensus 287 ~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 287 KNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp EECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred hhhhcccCCCceEec--CCCCeEEEEecCCcccccccc
Confidence 999998 99999999 899 9999999998 666653
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.6e-36 Score=300.45 Aligned_cols=299 Identities=15% Similarity=0.302 Sum_probs=234.4
Q ss_pred cCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCc------------ceeeccccc------------CCeEEEEEccC
Q psy12697 277 VPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGS------------LKSTLGQHK------------GPIFALKWNKR 332 (602)
Q Consensus 277 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~------------~~~~~~~~~------------~~i~~~~~~~~ 332 (602)
..+...|++++|+|+|++|++|+.||.|++|+.... ....+.+|. ..|.+++|+|+
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 345688999999999999999999999999997743 366777888 88999999999
Q ss_pred C--CEEEEEecCCcEEEEeCCCCcee---------------------------------------EE-eeeccCCeeeee
Q psy12697 333 G--NYILSAGVDKTTIIWDAASGQCE---------------------------------------QQ-FSFHSAPALDVD 370 (602)
Q Consensus 333 ~--~~l~~~~~dg~i~~wd~~~~~~~---------------------------------------~~-~~~~~~~~~~~~ 370 (602)
+ .+|++++.|+.|++||+.++... .. ...|...+.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 79999999999999998764432 11 356888999999
Q ss_pred ccCCCeEEEeeCCCeEEEEEcCC-Cceee-------EeccCCCCeEEEEECCCC-CEEEEEECCCeEEEEeCCCCee---
Q psy12697 371 WQSNTSFASCSTDQHIHVCKLHS-DKPVK-------SFEGHTNEVNAIKWDPQG-LLLASCSDDMTLKIWSLDKDNC--- 438 (602)
Q Consensus 371 ~~~~~~~~~~~~~~~i~i~d~~~-~~~~~-------~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~--- 438 (602)
|+|++.+++.+.|+.|++||+.+ ++.+. .+.+|...|.+++|+|++ ++|++|+.||.|++||+++++.
T Consensus 185 ~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 185 INSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp ECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred EcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 99986644444899999999984 33433 366899999999999998 9999999999999999998775
Q ss_pred -eEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC-Cceee
Q psy12697 439 -VHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS-GQCEQ 516 (602)
Q Consensus 439 -~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~ 516 (602)
+..+..|.... ....+..|...|.+++|+|+|++|++++. +.|++||+.+ ++++.
T Consensus 265 ~~~~~~~~~~~~----------------------~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~ 321 (447)
T 3dw8_B 265 HSKLFEEPEDPS----------------------NRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVE 321 (447)
T ss_dssp TCEEECCC---------------------------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSC
T ss_pred eeeEeccCCCcc----------------------ccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccc
Confidence 45555443210 01123346678999999999999999999 9999999997 88888
Q ss_pred eecccCCC---------------eeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccc--------------
Q psy12697 517 QFSFHSAP---------------ALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQ-------------- 566 (602)
Q Consensus 517 ~~~~~~~~---------------v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~-------------- 566 (602)
.+..|... +..++|+|++ +|++++.||.|++||+.+++.+. +..+....
T Consensus 322 ~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 400 (447)
T 3dw8_B 322 TYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCAS 400 (447)
T ss_dssp CEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECS
T ss_pred eeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCcccccc
Confidence 88888642 2348999999 99999999999999999887653 22221100
Q ss_pred --------eEEEEecCCcEEEEEECCCCCeEEEeccCCeEE
Q psy12697 567 --------LVHSYKGTGGIFEVCWNSRGDKVGASASDGSVF 599 (602)
Q Consensus 567 --------~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~ 599 (602)
....+.....|..++|+|++++||+++.++...
T Consensus 401 ~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~ 441 (447)
T 3dw8_B 401 GKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYI 441 (447)
T ss_dssp SCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEE
T ss_pred CCcccccccccccccCCceeEEEECCCCCEEEEEecceeee
Confidence 001122346789999999999999999988543
No 96
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.2e-34 Score=287.38 Aligned_cols=276 Identities=23% Similarity=0.440 Sum_probs=230.5
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCC-Ccceee--cccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeE
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKST--LGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQ 357 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 357 (602)
-.++.|+|+++ +.|++|. |+.|++||.. ++.... +..|...|++++|+|+|++|++|+.||.|++||+.+++.+.
T Consensus 106 ~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 106 YYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 45788999976 4777765 8999999987 444443 34678889999999999999999999999999999999999
Q ss_pred EeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCC-ceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCC
Q psy12697 358 QFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSD-KPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKD 436 (602)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 436 (602)
.+..|...+.++.+. +..+++++.|+.+.+||.... ..+..+.+|...+..+.++|+++++++++.|+.+++|+..++
T Consensus 184 ~~~~h~~~v~~~s~~-~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 184 NMTSHSARVGSLSWN-SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp EECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred EEeCCCCceEEEeeC-CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 999999999999886 467899999999999998864 456788999999999999999999999999999999999876
Q ss_pred eeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCC-CEEEE--EeCCCeEEEEeCCCCc
Q psy12697 437 NCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRG-NYILS--AGVDKTTIIWDAASGQ 513 (602)
Q Consensus 437 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~-~~l~s--~~~dg~i~iwd~~~~~ 513 (602)
+..... ......|...|.+++|+|++ .++++ |+.|+.|++||+.+++
T Consensus 263 ~~~~~~------------------------------~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~ 312 (420)
T 4gga_A 263 EGGWVP------------------------------LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA 312 (420)
T ss_dssp SSCSCC------------------------------SEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE
T ss_pred ccccee------------------------------eeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc
Confidence 432110 01122355666667777654 45554 4579999999999999
Q ss_pred eeeeecccCCCeeEeeecCCc-eEEEee--CCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEE
Q psy12697 514 CEQQFSFHSAPALDVDWQSNT-SFASCS--TDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVG 590 (602)
Q Consensus 514 ~~~~~~~~~~~v~~~~~s~~~-~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~ 590 (602)
+...+..| ..+.++.|+|++ .+++++ .|+.|+|||+.+++++..+.+|. +.|.+++|+|||++||
T Consensus 313 ~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~-----------~~V~~l~~spdg~~l~ 380 (420)
T 4gga_A 313 CLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT-----------SRVLSLTMSPDGATVA 380 (420)
T ss_dssp EEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS-----------SCEEEEEECTTSSCEE
T ss_pred cceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCC-----------CCEEEEEEcCCCCEEE
Confidence 99888754 578899999999 666554 79999999999999999998886 7799999999999999
Q ss_pred EeccCCeEEee
Q psy12697 591 ASASDGSVFKN 601 (602)
Q Consensus 591 ~~~~dg~v~i~ 601 (602)
+|+.||+|+|+
T Consensus 381 S~s~D~tvriW 391 (420)
T 4gga_A 381 SAAADETLRLW 391 (420)
T ss_dssp EEETTTEEEEE
T ss_pred EEecCCeEEEE
Confidence 99999999985
No 97
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-35 Score=296.97 Aligned_cols=273 Identities=14% Similarity=0.196 Sum_probs=218.2
Q ss_pred eCCCcceEEEEEcC-CCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEE
Q psy12697 219 IGHESEVFICAWNP-VKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLAT 297 (602)
Q Consensus 219 ~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 297 (602)
.+|...|.+++|+| ++++|++|+.||+|++||+.+........... ...|...|.+++|+|++++|++
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~-----------~~~h~~~v~~~~~~~~~~~l~s 128 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSL-----------TYDCSSTVTQITMIPNFDAFAV 128 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSE-----------EEECSSCEEEEEECTTSSEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceee-----------eccCCCCEEEEEEeCCCCEEEE
Confidence 57999999999999 99999999999999999987621111111111 1125788999999999999999
Q ss_pred EeCCCeEEEEcC----CCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeee--c
Q psy12697 298 GSYDGYARIWTS----DGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVD--W 371 (602)
Q Consensus 298 ~~~dg~i~i~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~--~ 371 (602)
|+.||.|++||+ .+........| .+..+.|+|++ +...+.++. +
T Consensus 129 ~s~dg~i~vwd~~~~~~~~~~~~~~~~--~i~~~~~~~~~----------------------------~~~~~~~~~~~~ 178 (437)
T 3gre_A 129 SSKDGQIIVLKVNHYQQESEVKFLNCE--CIRKINLKNFG----------------------------KNEYAVRMRAFV 178 (437)
T ss_dssp EETTSEEEEEEEEEEEETTEEEEEEEE--EEEEEEGGGGS----------------------------SCCCEEEEEEEE
T ss_pred EeCCCEEEEEEeccccCCceeeccccc--eeEEEEccCcc----------------------------cccCceEEEEEE
Confidence 999999999997 35555544444 67777777753 111122222 3
Q ss_pred cCC-CeEEEeeCCCeEEEEEcCCCceeeEecc--CCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeec-cccc
Q psy12697 372 QSN-TSFASCSTDQHIHVCKLHSDKPVKSFEG--HTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQ-AHNK 447 (602)
Q Consensus 372 ~~~-~~~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~ 447 (602)
+++ ..+++++.|+.|++||+++++.+..+.+ |...|++++|+|++++|++|+.||.|++||+++++++..+. .+..
T Consensus 179 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (437)
T 3gre_A 179 NEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA 258 (437)
T ss_dssp CSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC
Confidence 333 5688999999999999999999999988 88999999999999999999999999999999999888875 5666
Q ss_pred cEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc-------
Q psy12697 448 EIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF------- 520 (602)
Q Consensus 448 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------- 520 (602)
.|.+++|+|. |+|++++|++++.||.|++||+.+++++..+.+
T Consensus 259 ~v~~~~~~~~------------------------------~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 308 (437)
T 3gre_A 259 PITHVEVCQF------------------------------YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSM 308 (437)
T ss_dssp EEEEEEECTT------------------------------TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCG
T ss_pred ceEEEEeccc------------------------------cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCcc
Confidence 6666666553 456788999999999999999999988877664
Q ss_pred -------------------cCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeeccc
Q psy12697 521 -------------------HSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHT 563 (602)
Q Consensus 521 -------------------~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~ 563 (602)
|...|++++|+ ++ .|++++.|+.|++||+.+++....+.++.
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 370 (437)
T 3gre_A 309 EHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPS 370 (437)
T ss_dssp GGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC-
T ss_pred ceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEeccc
Confidence 44557888888 56 99999999999999999999888887764
No 98
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=286.32 Aligned_cols=293 Identities=19% Similarity=0.356 Sum_probs=238.9
Q ss_pred CCCCceeEEeeCC-CCCeEEEEeCCCeEEEEcCCCcc-eeec-------------ccccCCeEEEEEcc-CCCEEEEEec
Q psy12697 278 PSNKDVTSLDWNN-NGSFLATGSYDGYARIWTSDGSL-KSTL-------------GQHKGPIFALKWNK-RGNYILSAGV 341 (602)
Q Consensus 278 ~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~~-~~~~-------------~~~~~~i~~~~~~~-~~~~l~~~~~ 341 (602)
.|...|++++|+| ++++|++|+.||.|++|++.... ...+ ..|...|.+++|+| ++++|++++.
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 120 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF 120 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET
T ss_pred ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC
Confidence 3678999999999 99999999999999999987432 2111 25999999999999 7789999999
Q ss_pred CCcEEEEeCCCCceeEEeeeccCCeeeeeccCCC----eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCC
Q psy12697 342 DKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT----SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGL 417 (602)
Q Consensus 342 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 417 (602)
||.|++||+.+++....+. +...+.++.+.+.. .+++++.++.|++||+.+++.+..+.+|...|.+++|+|+++
T Consensus 121 d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYD 199 (408)
T ss_dssp TSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCT
T ss_pred CCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCC
Confidence 9999999999998887776 56678888887643 689999999999999999999999999999999999999998
Q ss_pred -EEEEEECCCeEEEEeCCCCe-eeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEE
Q psy12697 418 -LLASCSDDMTLKIWSLDKDN-CVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYI 495 (602)
Q Consensus 418 -~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l 495 (602)
+|++++.||.|++||++++. ++..+..+.... ..........|...|.+++|+|++++|
T Consensus 200 ~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l 260 (408)
T 4a11_B 200 YILATASADSRVKLWDVRRASGCLITLDQHNGKK-------------------SQAVESANTAHNGKVNGLCFTSDGLHL 260 (408)
T ss_dssp TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCS-------------------CCCTTTSSCSCSSCEEEEEECTTSSEE
T ss_pred cEEEEEcCCCcEEEEECCCCCccccccccccccc-------------------ceeeccccccccCceeEEEEcCCCCEE
Confidence 58999999999999998765 444443322110 011122345688999999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeeecccCC-----Ce-eEeeecCCceEEEeeCCCcEEEeecCCCCceeeeecccccceEE
Q psy12697 496 LSAGVDKTTIIWDAASGQCEQQFSFHSA-----PA-LDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVH 569 (602)
Q Consensus 496 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~v-~~~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~ 569 (602)
++++.||.|++||+.+++....+..+.. .+ ......+...+++++.|+.|++||+.+++++..+.+|.
T Consensus 261 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~------ 334 (408)
T 4a11_B 261 LTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHY------ 334 (408)
T ss_dssp EEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCS------
T ss_pred EEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCC------
Confidence 9999999999999999887655543221 11 22222233388888999999999999999888887765
Q ss_pred EEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 570 SYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 570 ~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
+.|.+++|+|++++|++++.||.|+++
T Consensus 335 -----~~v~~~~~s~~~~~l~s~~~dg~i~iw 361 (408)
T 4a11_B 335 -----KTVDCCVFQSNFQELYSGSRDCNILAW 361 (408)
T ss_dssp -----SCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred -----CeEEEEEEcCCCCEEEEECCCCeEEEE
Confidence 779999999999999999999999874
No 99
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-35 Score=288.74 Aligned_cols=253 Identities=23% Similarity=0.356 Sum_probs=211.4
Q ss_pred ceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCC--ceeEEEeeccCceEEEEeCCCCCCCCCCCCcccccc
Q psy12697 130 GECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSART--GQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDAS 207 (602)
Q Consensus 130 ~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (602)
|+++..+.+|.+.|++++|+|++++||+++.||.|+|||+.. ++.+
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~-------------------------------- 48 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLI-------------------------------- 48 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEE--------------------------------
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceee--------------------------------
Confidence 456788999999999999999999999999999999999973 3333
Q ss_pred ccccCCcceEeeCCCcceEEEEEcCC--CCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeE
Q psy12697 208 IEIPQSKATKLIGHESEVFICAWNPV--KDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTS 285 (602)
Q Consensus 208 ~~~~~~~~~~l~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 285 (602)
..+.+|...|.+++|+|+ +++|++++.||.|++||+.++... ... ....|...|.+
T Consensus 49 --------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~------~~~--------~~~~~~~~v~~ 106 (379)
T 3jrp_A 49 --------DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS------QIA--------VHAVHSASVNS 106 (379)
T ss_dssp --------EEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEE------EEE--------EECCCSSCEEE
T ss_pred --------eEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCcee------Eee--------eecCCCcceEE
Confidence 445679999999999987 899999999999999999875310 000 11235688999
Q ss_pred EeeCCC--CCeEEEEeCCCeEEEEcCCCc---ceeecccccCCeEEEEEcc-------------CCCEEEEEecCCcEEE
Q psy12697 286 LDWNNN--GSFLATGSYDGYARIWTSDGS---LKSTLGQHKGPIFALKWNK-------------RGNYILSAGVDKTTII 347 (602)
Q Consensus 286 ~~~~~~--~~~l~~~~~dg~i~i~~~~~~---~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~~~dg~i~~ 347 (602)
++|+|+ +.++++++.||.|++||+... ....+..|...|.+++|+| ++++|++++.||.|++
T Consensus 107 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 186 (379)
T 3jrp_A 107 VQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKI 186 (379)
T ss_dssp EEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEE
T ss_pred EEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEE
Confidence 999999 999999999999999998743 4456678999999999999 6999999999999999
Q ss_pred EeCCCCc----eeEEeeeccCCeeeeeccCC----CeEEEeeCCCeEEEEEcCCCc-----eeeEeccCCCCeEEEEECC
Q psy12697 348 WDAASGQ----CEQQFSFHSAPALDVDWQSN----TSFASCSTDQHIHVCKLHSDK-----PVKSFEGHTNEVNAIKWDP 414 (602)
Q Consensus 348 wd~~~~~----~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~i~d~~~~~-----~~~~~~~~~~~i~~~~~~~ 414 (602)
||++++. ....+..|...+.+++|+|+ ..+++++.||.|++||+.++. .+.....|...|.+++|+|
T Consensus 187 ~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 266 (379)
T 3jrp_A 187 WKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL 266 (379)
T ss_dssp EEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECS
T ss_pred EEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcC
Confidence 9998765 34566778999999999997 458899999999999999864 2233344888999999999
Q ss_pred CCCEEEEEECCCeEEEEeCCCC
Q psy12697 415 QGLLLASCSDDMTLKIWSLDKD 436 (602)
Q Consensus 415 ~~~~l~~~~~dg~i~iwd~~~~ 436 (602)
++++|++++.||.|++|++...
T Consensus 267 ~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 267 SGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp SSCCEEEEESSSSEEEEEEEET
T ss_pred CCCEEEEecCCCcEEEEeCCCC
Confidence 9999999999999999999754
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.8e-34 Score=287.69 Aligned_cols=264 Identities=22% Similarity=0.452 Sum_probs=232.0
Q ss_pred CCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEE
Q psy12697 280 NKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ 358 (602)
Q Consensus 280 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~ 358 (602)
...|.++++ +++++++|+.||.|++||.. ++....+.+|...|.+++| ++++|++++.||.|++||+.+++.+..
T Consensus 133 ~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~ 208 (435)
T 1p22_A 133 SKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNT 208 (435)
T ss_dssp CCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEE
T ss_pred CCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 466888877 78899999999999999976 6677788899999999999 788999999999999999999999999
Q ss_pred eeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCcee---eEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCC
Q psy12697 359 FSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPV---KSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDK 435 (602)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 435 (602)
+..|...+.++.|++ +.+++++.||.|++||+.+++.. ..+.+|...|.+++| ++++|++|+.||.|++||+++
T Consensus 209 ~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~ 285 (435)
T 1p22_A 209 LIHHCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTST 285 (435)
T ss_dssp ECCCCSCEEEEECCT-TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTT
T ss_pred EcCCCCcEEEEEEcC-CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCc
Confidence 999999999999974 58999999999999999988765 677899999999999 788999999999999999999
Q ss_pred CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee
Q psy12697 436 DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE 515 (602)
Q Consensus 436 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 515 (602)
++.+..+..|...+.++ .| +++++++|+.||.|++||+.+++++
T Consensus 286 ~~~~~~~~~~~~~v~~~----------------------------------~~--~~~~l~~g~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 286 CEFVRTLNGHKRGIACL----------------------------------QY--RDRLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp CCEEEEEECCSSCEEEE----------------------------------EE--ETTEEEEEETTSCEEEEETTTCCEE
T ss_pred CcEEEEEcCCCCcEEEE----------------------------------Ee--CCCEEEEEeCCCeEEEEECCCCCEE
Confidence 98888877665555444 44 3578999999999999999999999
Q ss_pred eeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCC---------ceeeeecccccceEEEEecCCcEEEEEECCC
Q psy12697 516 QQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDK---------PVKSFEGHTTGQLVHSYKGTGGIFEVCWNSR 585 (602)
Q Consensus 516 ~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~~l~~spd 585 (602)
..+.+|...|.+++| ++ .|++|+.||.|++||+.+++ ++..+.+| .+.|.+++| +
T Consensus 330 ~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h-----------~~~v~~l~~--~ 394 (435)
T 1p22_A 330 RVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH-----------SGRVFRLQF--D 394 (435)
T ss_dssp EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCC-----------SSCCCCEEE--C
T ss_pred EEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCC-----------CCCeEEEEe--C
Confidence 999999999999999 55 99999999999999987654 34444443 377999999 7
Q ss_pred CCeEEEeccCCeEEee
Q psy12697 586 GDKVGASASDGSVFKN 601 (602)
Q Consensus 586 g~~l~~~~~dg~v~i~ 601 (602)
+++|++++.||.|++.
T Consensus 395 ~~~l~s~s~Dg~i~iw 410 (435)
T 1p22_A 395 EFQIVSSSHDDTILIW 410 (435)
T ss_dssp SSCEEECCSSSEEEEE
T ss_pred CCEEEEEeCCCEEEEE
Confidence 8999999999999874
No 101
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=9.5e-34 Score=270.44 Aligned_cols=275 Identities=23% Similarity=0.427 Sum_probs=227.1
Q ss_pred ceeEEeeCCCCCeEEEEeCCCeEEEEcCC-Ccceeec--ccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEE
Q psy12697 282 DVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTL--GQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ 358 (602)
Q Consensus 282 ~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~ 358 (602)
..++|+||+++ +|++| .|+.|++||.. ++....+ ..|...|.+++|+|++++|++|+.||+|++||+++++++..
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 35789999986 66665 58999999986 5555544 46788899999999999999999999999999999999999
Q ss_pred eeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCC-ceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCe
Q psy12697 359 FSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSD-KPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDN 437 (602)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 437 (602)
+..|...+.++.+.+ ..+++++.++.+.+|+.... ..+..+.+|...+..+.+++++++|++++.||.|++||+++++
T Consensus 105 ~~~h~~~~~~~~~~~-~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 105 MTSHSARVGSLSWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp EECCSSCEEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred ecCccceEEEeecCC-CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 999998888776653 57899999999999998876 4567888999999999999999999999999999999998765
Q ss_pred eeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCE---EEEEeCCCeEEEEeCCCCce
Q psy12697 438 CVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNY---ILSAGVDKTTIIWDAASGQC 514 (602)
Q Consensus 438 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~---l~s~~~dg~i~iwd~~~~~~ 514 (602)
...... .....+.+.|.+++++|++.. +++++.++.|++||......
T Consensus 184 ~~~~~~------------------------------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~ 233 (318)
T 4ggc_A 184 GGWVPL------------------------------QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC 233 (318)
T ss_dssp TBSCCS------------------------------EEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE
T ss_pred ccccce------------------------------eeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc
Confidence 322111 011224555666666665543 34677889999999998877
Q ss_pred eeeecccCCCeeEeeecCCc-eEEEe--eCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEE
Q psy12697 515 EQQFSFHSAPALDVDWQSNT-SFASC--STDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGA 591 (602)
Q Consensus 515 ~~~~~~~~~~v~~~~~s~~~-~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~ 591 (602)
..... +...+..+.|+|++ .++++ +.|+.|++||+.+++++..+.+|. +.|++++|+|||++||+
T Consensus 234 ~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~-----------~~V~~l~~spdg~~l~S 301 (318)
T 4ggc_A 234 LSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT-----------SRVLSLTMSPDGATVAS 301 (318)
T ss_dssp EEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS-----------SCEEEEEECTTSSCEEE
T ss_pred ccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCC-----------CCEEEEEEcCCCCEEEE
Confidence 66554 77789999999998 65554 479999999999999999998876 77999999999999999
Q ss_pred eccCCeEEee
Q psy12697 592 SASDGSVFKN 601 (602)
Q Consensus 592 ~~~dg~v~i~ 601 (602)
|+.||+|+|+
T Consensus 302 ~s~D~~v~iW 311 (318)
T 4ggc_A 302 AAADETLRLW 311 (318)
T ss_dssp EETTTEEEEE
T ss_pred EecCCeEEEE
Confidence 9999999985
No 102
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.9e-35 Score=279.59 Aligned_cols=258 Identities=22% Similarity=0.363 Sum_probs=203.0
Q ss_pred ecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCc--eeEEeeeccCCeeeeeccC---CCeEEEeeCCCeEEEEE
Q psy12697 316 TLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ--CEQQFSFHSAPALDVDWQS---NTSFASCSTDQHIHVCK 390 (602)
Q Consensus 316 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~i~d 390 (602)
.+.+|...|.+++|+|+|++|++++.|++|++||+.++. .+..+..|...|.+++|++ +..+++++.|+.|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456899999999999999999999999999999998875 4567889999999999975 46799999999999999
Q ss_pred cCCC--ceeeEeccCCCCeEEEEECCC--CCEEEEEECCCeEEEEeCCCCee---eEeeccccccEEEEEECCCCCCCCC
Q psy12697 391 LHSD--KPVKSFEGHTNEVNAIKWDPQ--GLLLASCSDDMTLKIWSLDKDNC---VHDLQAHNKEIYTIKWSPTGPETSN 463 (602)
Q Consensus 391 ~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~ 463 (602)
++++ +....+.+|...|.+++|+|+ +.+|++|+.|+.|++||++.+.. ...+..|...+.+++|+|+......
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 9887 456778899999999999998 88999999999999999987532 3445667777777777776421000
Q ss_pred CCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC---ceeeeecccCCCeeEeeecCCc-----e
Q psy12697 464 PNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG---QCEQQFSFHSAPALDVDWQSNT-----S 535 (602)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~s~~~-----~ 535 (602)
..+... ...+++++|++|+.|+.|++||+..+ +++..+.+|...|.+++|+|++ .
T Consensus 168 -------------~~~~~~----~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~ 230 (316)
T 3bg1_A 168 -------------IDHPSG----QKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230 (316)
T ss_dssp ----------------CCS----CCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCE
T ss_pred -------------cccccc----cCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCce
Confidence 000000 01123678999999999999999755 4677889999999999999973 7
Q ss_pred EEEeeCCCcEEEeecCCCC----ceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 536 FASCSTDQHIHVCKLHSDK----PVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 536 l~~~~~d~~i~iw~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
|++++.|++|++|++.+.. ....+.. ..+.|.+++|+|+|++||+++.||.|+|.
T Consensus 231 las~s~D~~v~iw~~~~~~~~~~~~~~~~~-----------~~~~v~~v~~sp~g~~las~~~D~~v~lw 289 (316)
T 3bg1_A 231 IASCSQDGRVFIWTCDDASSNTWSPKLLHK-----------FNDVVWHVSWSITANILAVSGGDNKVTLW 289 (316)
T ss_dssp EEEEETTCEEEEEECSSTTCCCCBCCEEEE-----------CSSCEEEEEECTTTCCEEEEESSSCEEEE
T ss_pred EEEEcCCCeEEEEEccCccccchhhhhhhc-----------CCCcEEEEEEcCCCCEEEEEcCCCeEEEE
Confidence 9999999999999987632 1112222 24789999999999999999999999874
No 103
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-36 Score=292.54 Aligned_cols=307 Identities=12% Similarity=0.161 Sum_probs=233.6
Q ss_pred CCCCcccCCcceeccceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceE
Q psy12697 106 STGPAITNGEEVHRLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIF 185 (602)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 185 (602)
++|..++++. .+.+|+ |.+.+ +.+++|...|.+++|+|+| .++.+.+|+.+....+
T Consensus 25 pDG~~iASas--~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~~~---------- 80 (588)
T 2j04_A 25 RDGTLYLTTF--PDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQNGLL---------- 80 (588)
T ss_dssp TTSCEEEECS--SSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSCSS----------
T ss_pred CCCCEEEEEc--CCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCCCceEe----------
Confidence 4555555543 356787 65555 4558999999999999999 4555555543321111
Q ss_pred EEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEE
Q psy12697 186 EVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIV 265 (602)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~ 265 (602)
-.+|...|.+++|+|+|..||+++.||.|++||.+. .
T Consensus 81 --------------------------------~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-----------~ 117 (588)
T 2j04_A 81 --------------------------------NSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-----------M 117 (588)
T ss_dssp --------------------------------TTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-----------E
T ss_pred --------------------------------ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-----------e
Confidence 014678899999999999999999999999999533 0
Q ss_pred EEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcc--------eeec----ccccCCeEEEEEccCC
Q psy12697 266 LRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSL--------KSTL----GQHKGPIFALKWNKRG 333 (602)
Q Consensus 266 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~--------~~~~----~~~~~~i~~~~~~~~~ 333 (602)
... .. ....-....+.+++|+|||++|++|+.||.|++|++.+.. ...+ .+|...|.+++|+|+|
T Consensus 118 l~~-l~--~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg 194 (588)
T 2j04_A 118 LTN-LD--SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV 194 (588)
T ss_dssp EEE-CC--CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE
T ss_pred eee-cc--CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc
Confidence 000 00 0000012369999999999999999999999999988653 3454 6788899999999999
Q ss_pred CEEEEEecCCcEEEEeCCCCcee---EEe-eeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEE
Q psy12697 334 NYILSAGVDKTTIIWDAASGQCE---QQF-SFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNA 409 (602)
Q Consensus 334 ~~l~~~~~dg~i~~wd~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~ 409 (602)
+++++.|+++++||+..++.. ..+ ..|...|.+++|+ +..+++++ ++.|++||+.+++......+|...+..
T Consensus 195 --Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~ 270 (588)
T 2j04_A 195 --LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHI 270 (588)
T ss_dssp --EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCE
T ss_pred --EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEE
Confidence 888999999999999887742 455 4677899999999 67777776 699999999988874444489999999
Q ss_pred EEE--CCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEE
Q psy12697 410 IKW--DPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALK 487 (602)
Q Consensus 410 ~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 487 (602)
++| +|++..|+++++||+ ++|..+. ++
T Consensus 271 va~~~s~d~~~La~a~edG~-klw~~d~--------------------------------------------------~~ 299 (588)
T 2j04_A 271 IPLNHEKESTILLMSNKTSY-KVLLEDE--------------------------------------------------LH 299 (588)
T ss_dssp EEETTCSSCEEEEECSSCEE-EEEESSS--------------------------------------------------EE
T ss_pred EEeeeCCCCCEEEEEcCCCC-EEEeecc--------------------------------------------------EE
Confidence 999 999999999999999 9998761 23
Q ss_pred EccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeC
Q psy12697 488 WNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCST 541 (602)
Q Consensus 488 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~ 541 (602)
++||+..+++. |+++++|+...+. +..+.+ ...|.+++||||| .+|+++.
T Consensus 300 ~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 300 VTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp EECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred ECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 45566666664 9999999976444 445554 6679999999999 7777653
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.9e-33 Score=269.26 Aligned_cols=290 Identities=14% Similarity=0.197 Sum_probs=201.3
Q ss_pred eeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcc
Q psy12697 124 LWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESME 203 (602)
Q Consensus 124 vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (602)
||++.+.+.+.++.+|...|++++|+|||++||+|+.|+ ++|||+.+++......
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~------------------------ 57 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE------------------------ 57 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE------------------------
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee------------------------
Confidence 677778888888899999999999999999999998776 7899988776543211
Q ss_pred ccccccccCCcceEeeCCCcceEEEEEcCCCCEE-EEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCc
Q psy12697 204 VDASIEIPQSKATKLIGHESEVFICAWNPVKDFL-ASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKD 282 (602)
Q Consensus 204 ~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (602)
...+..+++.++++.+ ++++.|++|++||+.+++
T Consensus 58 ------------------~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~--------------------------- 92 (355)
T 3vu4_A 58 ------------------MRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ--------------------------- 92 (355)
T ss_dssp ------------------CSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTE---------------------------
T ss_pred ------------------cCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCc---------------------------
Confidence 1135556666666655 345566677777765431
Q ss_pred eeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCC-ceeEEeee
Q psy12697 283 VTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG-QCEQQFSF 361 (602)
Q Consensus 283 i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~ 361 (602)
....+ .+...|.+++|+++. ++++ .++.|++||+.++ +.+..+..
T Consensus 93 ------------------------------~~~~~-~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~ 138 (355)
T 3vu4_A 93 ------------------------------DVSRI-KVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR 138 (355)
T ss_dssp ------------------------------EEEEE-ECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE
T ss_pred ------------------------------EEEEE-ECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc
Confidence 11122 144578899998763 4444 4789999999988 66665554
Q ss_pred ccCCeeeeeccCCCeEEE--eeCCCeEEEEEcCCCc---------------e-eeEeccCCCCeEEEEECCCCCEEEEEE
Q psy12697 362 HSAPALDVDWQSNTSFAS--CSTDQHIHVCKLHSDK---------------P-VKSFEGHTNEVNAIKWDPQGLLLASCS 423 (602)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~--~~~~~~i~i~d~~~~~---------------~-~~~~~~~~~~i~~~~~~~~~~~l~~~~ 423 (602)
+...+++++ ..+++ ++.+|.|++||+.+++ + +..+.+|...|++++|+|+|++|++|+
T Consensus 139 ---~~~~~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s 214 (355)
T 3vu4_A 139 ---FGGVCEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS 214 (355)
T ss_dssp ---EEEEEEEET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ---CCceEEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEe
Confidence 333344455 55555 6889999999998865 2 788899999999999999999999999
Q ss_pred CCCe-EEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCC
Q psy12697 424 DDMT-LKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDK 502 (602)
Q Consensus 424 ~dg~-i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg 502 (602)
.|++ |++||+++++++..+.. ..|...|.+++|+|+|++|++++.|+
T Consensus 215 ~d~~~v~iwd~~~~~~~~~~~~--------------------------------g~h~~~v~~~~~s~~~~~l~s~s~d~ 262 (355)
T 3vu4_A 215 QDGTIIRVFKTEDGVLVREFRR--------------------------------GLDRADVVDMKWSTDGSKLAVVSDKW 262 (355)
T ss_dssp TTCSEEEEEETTTCCEEEEEEC--------------------------------TTCCSCEEEEEECTTSCEEEEEETTC
T ss_pred CCCCEEEEEECCCCcEEEEEEc--------------------------------CCCCCcEEEEEECCCCCEEEEEECCC
Confidence 9998 99999999988877651 01556677777888999999999999
Q ss_pred eEEEEeCCCCcee--eeec---------------------ccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCC
Q psy12697 503 TTIIWDAASGQCE--QQFS---------------------FHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSD 553 (602)
Q Consensus 503 ~i~iwd~~~~~~~--~~~~---------------------~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~ 553 (602)
+|++||+..+... ..+. .+..+...++|++|+ .+++++.||.+++|++..+
T Consensus 263 ~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 263 TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred EEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 9999999765321 1111 012234678999999 9999999999999997543
No 105
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=1.3e-32 Score=303.31 Aligned_cols=442 Identities=12% Similarity=0.083 Sum_probs=319.5
Q ss_pred cceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCC------ceEEEEecCCceeEEEeec-cCce-------E
Q psy12697 120 LTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFD------KCVHIWSARTGQLVHSYKG-TGGI-------F 185 (602)
Q Consensus 120 ~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~-~~~~-------~ 185 (602)
..|.+||+.+++ .+.+.+|...|.+++|||||++||+++.+ ..|.+||+.+++. ..+.. ...+ .
T Consensus 33 ~~l~~~~~~gg~-~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~-~~lt~~~~~~~~~~~~~~ 110 (1045)
T 1k32_A 33 DDLWEHDLKSGS-TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI-KRITYFSGKSTGRRMFTD 110 (1045)
T ss_dssp TEEEEEETTTCC-EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE-EECCCCCEEEETTEECSE
T ss_pred CcEEEEECCCCc-EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCe-EEcccCCCcccccccccc
Confidence 479999998776 56788899999999999999999988643 4899999998874 44443 3345 7
Q ss_pred EEEeCCCCCCCCCCCCc----c--cccccccc------------------------------------------------
Q psy12697 186 EVCWNSRGTPPNPPESM----E--VDASIEIP------------------------------------------------ 211 (602)
Q Consensus 186 ~~~~~~~~~~~~~~~~~----~--~~~~~~~~------------------------------------------------ 211 (602)
.++|+|+|..+...... . ....+...
T Consensus 111 ~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~ 190 (1045)
T 1k32_A 111 VAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIE 190 (1045)
T ss_dssp EEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEE
T ss_pred cccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEE
Confidence 89999999732221110 0 00000000
Q ss_pred --CCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeC
Q psy12697 212 --QSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWN 289 (602)
Q Consensus 212 --~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 289 (602)
......+.+|...+.++.|+++ .++++++.|+.+.+|.+....... ... .....+...+|+
T Consensus 191 ~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~----~~l------------~~~~~~~~~~~S 253 (1045)
T 1k32_A 191 VNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDL----RKH------------TSFTDYYPRHLN 253 (1045)
T ss_dssp EETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSC----EEC------------CCCCSSCEEEEE
T ss_pred CCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcc----eEe------------cCCCCcceeeEc
Confidence 0122344678888999999988 666777888999999876422110 000 011346677999
Q ss_pred CCCCeEEEEeCCCeEEEEcCCCcceeeccc-----------ccCCeEEEEEc-cCCCEEEEEecCCcEEEEeCCCCceeE
Q psy12697 290 NNGSFLATGSYDGYARIWTSDGSLKSTLGQ-----------HKGPIFALKWN-KRGNYILSAGVDKTTIIWDAASGQCEQ 357 (602)
Q Consensus 290 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~-----------~~~~i~~~~~~-~~~~~l~~~~~dg~i~~wd~~~~~~~~ 357 (602)
|+|+.++.+ .++.|.+|+.....+..+.. |...+.+++|+ |+|++|++++ ++.+.+|++..++...
T Consensus 254 pDG~~la~~-~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~ 331 (1045)
T 1k32_A 254 TDGRRILFS-KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK 331 (1045)
T ss_dssp ESSSCEEEE-ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE
T ss_pred CCCCEEEEE-eCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE
Confidence 999999887 58999999986555544443 34468999999 9999999887 8899999998876543
Q ss_pred EeeeccC-CeeeeeccCCC-eEEEeeCCCeEE-EEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCC
Q psy12697 358 QFSFHSA-PALDVDWQSNT-SFASCSTDQHIH-VCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLD 434 (602)
Q Consensus 358 ~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~i~-i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 434 (602)
+..+.. .+..+.|+ ++ .++.++.++.+. +|++.+++... +.+|...+..++|+|||++|++++.++.|++||+.
T Consensus 332 -~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~ 408 (1045)
T 1k32_A 332 -VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLE 408 (1045)
T ss_dssp -CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred -ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECC
Confidence 445555 78889999 75 477777788888 99998776543 44788899999999999999999999999999999
Q ss_pred CCeeeEeeccccccEEEEEECCCCCCCCCCCc-----------ceeeee------eeccCCccCCeEEEEEccCCCEEEE
Q psy12697 435 KDNCVHDLQAHNKEIYTIKWSPTGPETSNPNM-----------SLIFIL------KSTLGQHKGPIFALKWNKRGNYILS 497 (602)
Q Consensus 435 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----------~~~~~~------~~~~~~~~~~v~~i~~s~~~~~l~s 497 (602)
+++.......|...+..++|+|++..++.... ..+..+ ...+..|...+..++|+|||++|+.
T Consensus 409 tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 409 TGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp TCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEE
T ss_pred CCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEE
Confidence 99888777788888999999999987644322 122222 1235567778899999999999999
Q ss_pred EeCCCeEEEEeCCCCc-------------------------------------------eeeeecccCCCeeEeeecCCc
Q psy12697 498 AGVDKTTIIWDAASGQ-------------------------------------------CEQQFSFHSAPALDVDWQSNT 534 (602)
Q Consensus 498 ~~~dg~i~iwd~~~~~-------------------------------------------~~~~~~~~~~~v~~~~~s~~~ 534 (602)
++.++...+|+..... .+..+..|.+.+..++++||+
T Consensus 489 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg 568 (1045)
T 1k32_A 489 LSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESS 568 (1045)
T ss_dssp EESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSE
T ss_pred EecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCC
Confidence 9987777777643221 112333466778899999999
Q ss_pred -eEEE-------------eeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEe
Q psy12697 535 -SFAS-------------CSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFK 600 (602)
Q Consensus 535 -~l~~-------------~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i 600 (602)
.+++ ......|.+||+.+++... +. ..+..++|||||++|++++.++...+
T Consensus 569 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~--------------~~v~~~~~S~DG~~l~~~~~~~i~~~ 633 (1045)
T 1k32_A 569 ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE-VK--------------NNLTDLRLSADRKTVMVRKDDGKIYT 633 (1045)
T ss_dssp EEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEE-EE--------------EEEEEEEECTTSCEEEEEETTSCEEE
T ss_pred eEEEEecccCcccccccccCCCceEEEEECCCCcEEE-ee--------------cCcceEEECCCCCEEEEEcCCcEEEE
Confidence 5664 1234578888887765321 11 34788999999999999988854443
No 106
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-33 Score=273.26 Aligned_cols=273 Identities=18% Similarity=0.292 Sum_probs=226.6
Q ss_pred CCCCceeEEeeCCC---CCeEEEEeCCCeEEEEcCCC--cce-eecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCC
Q psy12697 278 PSNKDVTSLDWNNN---GSFLATGSYDGYARIWTSDG--SLK-STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 351 (602)
Q Consensus 278 ~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~~~~~--~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~ 351 (602)
.|...|++++|+|+ |++|++|+.||.|++|++.. ... ..+..|...|.+++|+|++++|++++.||.|++||+.
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 116 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLS 116 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcC
Confidence 46789999999999 69999999999999999873 333 6778899999999999999999999999999999999
Q ss_pred CCceeEEeeeccCCeeeeec--cCCCe-EEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeE
Q psy12697 352 SGQCEQQFSFHSAPALDVDW--QSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTL 428 (602)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 428 (602)
+++... +..|...+.++.| ++++. +++++.|+.|++||+++++++..+..+. .+.++.+.+ ..+++++.++.+
T Consensus 117 ~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i 192 (368)
T 3mmy_A 117 SNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIY--PMAVVATAERGL 192 (368)
T ss_dssp TTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEET--TEEEEEEGGGCE
T ss_pred CCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecC--CeeEEEeCCCcE
Confidence 988766 5668899999999 77754 8899999999999999999988888665 566666654 488999999999
Q ss_pred EEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCE----EEEEeCCCeE
Q psy12697 429 KIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNY----ILSAGVDKTT 504 (602)
Q Consensus 429 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~----l~s~~~dg~i 504 (602)
++|+++.......... ..+...+.++.+.++... +++++.||.|
T Consensus 193 ~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i 240 (368)
T 3mmy_A 193 IVYQLENQPSEFRRIE--------------------------------SPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV 240 (368)
T ss_dssp EEEECSSSCEEEEECC--------------------------------CSCSSCEEEEEEEECTTSCEEEEEEEETTSEE
T ss_pred EEEEeccccchhhhcc--------------------------------ccccCCCceEEEcccCCCCCCeEEEecCCCcE
Confidence 9999987543322111 012233344444444443 9999999999
Q ss_pred EEEeCCCC---ceeeeecccCC------------CeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceE
Q psy12697 505 IIWDAASG---QCEQQFSFHSA------------PALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLV 568 (602)
Q Consensus 505 ~iwd~~~~---~~~~~~~~~~~------------~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 568 (602)
++||+... ..+..+..|.. +|.+++|+|++ +|++++.||.|++||+.+++++..+.+|.
T Consensus 241 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----- 315 (368)
T 3mmy_A 241 AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD----- 315 (368)
T ss_dssp EEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS-----
T ss_pred EEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCC-----
Confidence 99999987 55677777766 79999999999 99999999999999999888888777664
Q ss_pred EEEecCCcEEEEEECCCCCeEEEeccCCe
Q psy12697 569 HSYKGTGGIFEVCWNSRGDKVGASASDGS 597 (602)
Q Consensus 569 ~~~~~~~~i~~l~~spdg~~l~~~~~dg~ 597 (602)
..|.+++|+|||++|++++.|+.
T Consensus 316 ------~~v~~~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 316 ------QPISACCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp ------SCEEEEEECTTSSCEEEEECCCS
T ss_pred ------CCceEEEECCCCCeEEEEecccc
Confidence 77999999999999999999874
No 107
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-34 Score=306.73 Aligned_cols=261 Identities=23% Similarity=0.374 Sum_probs=205.5
Q ss_pred eeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCc--eeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccc
Q psy12697 133 LNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTG--QLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEI 210 (602)
Q Consensus 133 ~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (602)
+..+.+|.+.|++++|+|++++|++|+.||+|+|||+.++ +.+
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~----------------------------------- 46 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLI----------------------------------- 46 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEE-----------------------------------
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccc-----------------------------------
Confidence 3567899999999999999999999999999999999843 333
Q ss_pred cCCcceEeeCCCcceEEEEEcCC--CCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEee
Q psy12697 211 PQSKATKLIGHESEVFICAWNPV--KDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDW 288 (602)
Q Consensus 211 ~~~~~~~l~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 288 (602)
..+.+|...|.+++|+|+ +++|++++.||.|++||+.++... ... ....|...|++++|
T Consensus 47 -----~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~------~~~--------~~~~h~~~V~~v~~ 107 (753)
T 3jro_A 47 -----DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS------QIA--------VHAVHSASVNSVQW 107 (753)
T ss_dssp -----EEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEE------EEE--------EECCCSSCEEEEEE
T ss_pred -----eeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccc------ccc--------cccCCCCCeEEEEE
Confidence 456689999999999988 899999999999999999875310 000 11235788999999
Q ss_pred CCC--CCeEEEEeCCCeEEEEcCCCc---ceeecccccCCeEEEEEccC-------------CCEEEEEecCCcEEEEeC
Q psy12697 289 NNN--GSFLATGSYDGYARIWTSDGS---LKSTLGQHKGPIFALKWNKR-------------GNYILSAGVDKTTIIWDA 350 (602)
Q Consensus 289 ~~~--~~~l~~~~~dg~i~i~~~~~~---~~~~~~~~~~~i~~~~~~~~-------------~~~l~~~~~dg~i~~wd~ 350 (602)
+|+ ++.+++|+.||.|++||+... ....+..|...|.+++|+|. ++++++++.||.|++||+
T Consensus 108 sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~ 187 (753)
T 3jro_A 108 APHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY 187 (753)
T ss_dssp CCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEE
T ss_pred CCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEec
Confidence 999 999999999999999998743 44566789999999999994 677777777777777776
Q ss_pred CCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCC---CCEEEEEECCCe
Q psy12697 351 ASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQ---GLLLASCSDDMT 427 (602)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~ 427 (602)
+++.... .....+.+|...|.+++|+|+ +++|++++.||.
T Consensus 188 ~~~~~~~-------------------------------------~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~ 230 (753)
T 3jro_A 188 NSDAQTY-------------------------------------VLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 230 (753)
T ss_dssp ETTTTEE-------------------------------------EEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC
T ss_pred cCCcccc-------------------------------------eeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE
Confidence 5542111 234566789999999999999 999999999999
Q ss_pred EEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEE
Q psy12697 428 LKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIW 507 (602)
Q Consensus 428 i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iw 507 (602)
|++||++++....... ......|...|.+++|+|+|++|++++.||.|++|
T Consensus 231 I~iwd~~~~~~~~~~~-----------------------------~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vw 281 (753)
T 3jro_A 231 CIIWTQDNEQGPWKKT-----------------------------LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 281 (753)
T ss_dssp EEEEEESSSSSCCBCC-----------------------------BSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECC
T ss_pred EEEecCCCCCCcceeE-----------------------------EeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 9999998753211100 01223477889999999999999999999999999
Q ss_pred eCCCCc
Q psy12697 508 DAASGQ 513 (602)
Q Consensus 508 d~~~~~ 513 (602)
|+.++.
T Consensus 282 d~~~~~ 287 (753)
T 3jro_A 282 KENLEG 287 (753)
T ss_dssp BCCSSS
T ss_pred ecCCCC
Confidence 998654
No 108
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.4e-33 Score=278.24 Aligned_cols=275 Identities=15% Similarity=0.194 Sum_probs=227.2
Q ss_pred ceeEEeeCCCCCeEE-EEeCCCeEEEEcCCC-----cceeecccccCCeEEEEEcc-CCCEEEEEecCCcEEEEeCCCC-
Q psy12697 282 DVTSLDWNNNGSFLA-TGSYDGYARIWTSDG-----SLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASG- 353 (602)
Q Consensus 282 ~i~~~~~~~~~~~l~-~~~~dg~i~i~~~~~-----~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~- 353 (602)
....++++|+...++ +++.+|.|++|++.. .....+.+|...|.+++|+| ++++|++++.||.|++||+.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 345678888765444 478899999999753 24456778999999999999 9999999999999999999988
Q ss_pred ------ceeEEeeeccCCeeeeeccCCC--eEEEeeCCCeEEEEEcCCCceeeEe--ccCCCCeEEEEECCCCCEEEEEE
Q psy12697 354 ------QCEQQFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHSDKPVKSF--EGHTNEVNAIKWDPQGLLLASCS 423 (602)
Q Consensus 354 ------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~ 423 (602)
+.+..+..|...+.+++|+|++ .+++++.|+.|++||+.+++.+..+ .+|...|.+++|+|++++|++++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 6678888999999999999984 6899999999999999999999999 88999999999999999999999
Q ss_pred CCCeEEEEeCCCCeeeEee-ccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE---e
Q psy12697 424 DDMTLKIWSLDKDNCVHDL-QAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA---G 499 (602)
Q Consensus 424 ~dg~i~iwd~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~---~ 499 (602)
.||.|++||+++++.+..+ ..|.. ..+.++.|+|++++|++| +
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~l~~g~~~~ 242 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEG---------------------------------TRPVHAVFVSEGKILTTGFSRM 242 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCS---------------------------------SSCCEEEECSTTEEEEEEECTT
T ss_pred cCCcEEEEeCCCCceeeeeccCCCC---------------------------------CcceEEEEcCCCcEEEEeccCC
Confidence 9999999999998877766 33322 236778888899999999 7
Q ss_pred CCCeEEEEeCCCCce-eeeec-ccCCCeeEeeecCCc-eEE-EeeCCCcEEEeecCCCCc-eeeeecccccceEEEEecC
Q psy12697 500 VDKTTIIWDAASGQC-EQQFS-FHSAPALDVDWQSNT-SFA-SCSTDQHIHVCKLHSDKP-VKSFEGHTTGQLVHSYKGT 574 (602)
Q Consensus 500 ~dg~i~iwd~~~~~~-~~~~~-~~~~~v~~~~~s~~~-~l~-~~~~d~~i~iw~~~~~~~-~~~~~~~~~~~~~~~~~~~ 574 (602)
.|+.|++||+.+++. +.... .|...+.+++|+|++ .|+ +++.|+.|++||+.++++ +..+..+. ..
T Consensus 243 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~---------~~ 313 (402)
T 2aq5_A 243 SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS---------SK 313 (402)
T ss_dssp CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC---------CS
T ss_pred CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc---------cC
Confidence 899999999998765 33332 467789999999999 665 555799999999988775 44444332 34
Q ss_pred CcEEEEEECCCCCeEEEeccCCeEEe
Q psy12697 575 GGIFEVCWNSRGDKVGASASDGSVFK 600 (602)
Q Consensus 575 ~~i~~l~~spdg~~l~~~~~dg~v~i 600 (602)
..|.+++|+|++.++++ .++.+++
T Consensus 314 ~~v~~~~~sp~~~~~~s--~~~~~~~ 337 (402)
T 2aq5_A 314 ESQRGMGYMPKRGLEVN--KCEIARF 337 (402)
T ss_dssp SCCSEEEECCGGGSCGG--GTEEEEE
T ss_pred CcccceEEeccccccee--cceeEEE
Confidence 78999999999998875 4445554
No 109
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-33 Score=273.75 Aligned_cols=263 Identities=22% Similarity=0.323 Sum_probs=208.4
Q ss_pred cceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCC--CCceeEEeeeccCCeeeeeccCC---CeEEEeeCCCeE
Q psy12697 312 SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA--SGQCEQQFSFHSAPALDVDWQSN---TSFASCSTDQHI 386 (602)
Q Consensus 312 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i 386 (602)
.....+.+|...|.+++|+|++++|++++.||.|++||+. +++....+..|...+.++.|+++ ..+++++.||.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 4556778999999999999999999999999999999998 55677788889999999999754 679999999999
Q ss_pred EEEEcCCCc--eeeEeccCCCCeEEEEECCC--CCEEEEEECCCeEEEEeCCCCee--eEeeccccccEEEEEECCCCCC
Q psy12697 387 HVCKLHSDK--PVKSFEGHTNEVNAIKWDPQ--GLLLASCSDDMTLKIWSLDKDNC--VHDLQAHNKEIYTIKWSPTGPE 460 (602)
Q Consensus 387 ~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~i~~~~~~~~~~~ 460 (602)
++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.||.|++||+++... ...+..|...+.+++|+|....
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccc
Confidence 999999987 77888889999999999999 99999999999999999987632 3334455555555555543210
Q ss_pred CCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCc----eeeeecccCCCeeEeeecCC---
Q psy12697 461 TSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ----CEQQFSFHSAPALDVDWQSN--- 533 (602)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~--- 533 (602)
.. ......+++++|++++.||.|++||+.++. ....+.+|...|.+++|+|+
T Consensus 162 ~~---------------------~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 220 (379)
T 3jrp_A 162 ED---------------------GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 220 (379)
T ss_dssp -----------------------------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred cc---------------------ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCC
Confidence 00 001112378999999999999999998764 44677889999999999999
Q ss_pred c-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 534 T-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 534 ~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
+ .|++++.||.|++||+.++.......... .......|.+++|+|+|++|++++.||.|+|.
T Consensus 221 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw 283 (379)
T 3jrp_A 221 RSYLASVSQDRTCIIWTQDNEQGPWKKTLLK------EEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 283 (379)
T ss_dssp SEEEEEEETTSCEEEEEESSTTSCCEEEESS------SSCCSSCEEEEEECSSSCCEEEEESSSSEEEE
T ss_pred CCeEEEEeCCCEEEEEeCCCCCccceeeeec------cccCCCcEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 8 99999999999999998764221111000 01124779999999999999999999999874
No 110
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.8e-33 Score=275.22 Aligned_cols=283 Identities=17% Similarity=0.263 Sum_probs=231.2
Q ss_pred eEEEEEcCCCCEE-EEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC-CCCeEEEEeCCC
Q psy12697 225 VFICAWNPVKDFL-ASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN-NGSFLATGSYDG 302 (602)
Q Consensus 225 v~~~~~~~~~~~l-~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg 302 (602)
...++++|+...+ ++++.||.|++|++........ .......|...|++++|+| ++++|++|+.||
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~------------~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg 104 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDK------------NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDC 104 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCT------------TCCCBCCCSSCEEEEEECTTCTTEEEEEETTS
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCC------------CCceEecCCCCEEEEEeCCCCCCEEEEEeCCC
Confidence 3457888887544 4578899999999965422110 0112234678999999999 999999999999
Q ss_pred eEEEEcCCC--------cceeecccccCCeEEEEEccCC-CEEEEEecCCcEEEEeCCCCceeEEe--eeccCCeeeeec
Q psy12697 303 YARIWTSDG--------SLKSTLGQHKGPIFALKWNKRG-NYILSAGVDKTTIIWDAASGQCEQQF--SFHSAPALDVDW 371 (602)
Q Consensus 303 ~i~i~~~~~--------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~--~~~~~~~~~~~~ 371 (602)
.|++|++.. .....+.+|...|.+++|+|++ ++|++++.||.|++||+++++....+ ..|...+.+++|
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 184 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDW 184 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEE
T ss_pred eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEE
Confidence 999999874 4567788899999999999998 69999999999999999999999888 789999999999
Q ss_pred cCCC-eEEEeeCCCeEEEEEcCCCceeeEe-ccCCCC-eEEEEECCCCCEEEEE---ECCCeEEEEeCCCCee-eEeecc
Q psy12697 372 QSNT-SFASCSTDQHIHVCKLHSDKPVKSF-EGHTNE-VNAIKWDPQGLLLASC---SDDMTLKIWSLDKDNC-VHDLQA 444 (602)
Q Consensus 372 ~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~l~~~---~~dg~i~iwd~~~~~~-~~~~~~ 444 (602)
+|++ .+++++.|+.|++||+++++.+..+ .+|.+. +.+++|+|++++|++| +.|+.|++||+++++. +....
T Consensus 185 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~- 263 (402)
T 2aq5_A 185 SRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQE- 263 (402)
T ss_dssp CTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEE-
T ss_pred CCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEe-
Confidence 9875 5889999999999999999999888 788876 8999999999999999 7899999999987543 11111
Q ss_pred ccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEE-EeCCCeEEEEeCCCCce-eeeecc--
Q psy12697 445 HNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILS-AGVDKTTIIWDAASGQC-EQQFSF-- 520 (602)
Q Consensus 445 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s-~~~dg~i~iwd~~~~~~-~~~~~~-- 520 (602)
..+...+.+++|+|++++|++ ++.||.|++||+.+++. +..+..
T Consensus 264 --------------------------------~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~ 311 (402)
T 2aq5_A 264 --------------------------------LDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS 311 (402)
T ss_dssp --------------------------------CCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC
T ss_pred --------------------------------ccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc
Confidence 124567888999999999975 55799999999998884 444444
Q ss_pred cCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCC
Q psy12697 521 HSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDK 554 (602)
Q Consensus 521 ~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~ 554 (602)
|..+|.+++|+|++ .+++ .++.+++|++.+++
T Consensus 312 ~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 312 SKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp CSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred cCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence 45899999999999 5543 56799999998754
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-32 Score=271.99 Aligned_cols=265 Identities=13% Similarity=0.075 Sum_probs=208.2
Q ss_pred CCCCceeEEeeCCCCCeE-EEEeCCCeEEEEcCC---Ccceeecc--cccCCeEEEEEccCCCEEEEEecCCcEEEEeCC
Q psy12697 278 PSNKDVTSLDWNNNGSFL-ATGSYDGYARIWTSD---GSLKSTLG--QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 351 (602)
Q Consensus 278 ~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~~~~---~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~ 351 (602)
++...|.+++|+|++++| ++++.||.|++|++. +.....+. .|...|.+++|+|++++|++++.+|.+++|++.
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDIN 179 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecC
Confidence 456789999999999996 889999999999976 45555554 567889999999999999999999999999998
Q ss_pred CCceeE----EeeeccCCeeeeeccCC---C-eEEEeeCCCeEEEEEcCCCceeeE-eccCCCCeEEEEECCCCCEEEEE
Q psy12697 352 SGQCEQ----QFSFHSAPALDVDWQSN---T-SFASCSTDQHIHVCKLHSDKPVKS-FEGHTNEVNAIKWDPQGLLLASC 422 (602)
Q Consensus 352 ~~~~~~----~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~ 422 (602)
+++... .+..|...+.++.|+|+ + .+++++.|+.|++||+.+++.+.. +.+|...|.+++|+ ++++|+++
T Consensus 180 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~ 258 (450)
T 2vdu_B 180 SIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSA 258 (450)
T ss_dssp SCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEE
T ss_pred CcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEE
Confidence 887554 77789999999999997 6 688999999999999999988877 66899999999999 99999999
Q ss_pred ECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe-CC
Q psy12697 423 SDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG-VD 501 (602)
Q Consensus 423 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~d 501 (602)
+.|+.|++||+++++++..+..+.. +..+.+.... ................|.+++|+|++++|++++ .|
T Consensus 259 ~~d~~v~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~--------~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d 329 (450)
T 2vdu_B 259 GGDDKIFAWDWKTGKNLSTFDYNSL-IKPYLNDQHL--------APPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT 329 (450)
T ss_dssp ESSSEEEEEETTTCCEEEEEECHHH-HGGGCCTTSB--------C----------CBCCCEEEEEECSSSSEEEEEETTC
T ss_pred eCCCeEEEEECCCCcEeeeecchhh-hhhhhhhccc--------ccccccccccccceEEEEEEEEeCCCCEEEEEECCC
Confidence 9999999999999988877754321 0000000000 000000001113456789999999999999999 89
Q ss_pred CeEEEEeC--CCC---ceeeeecccCCCeeEeeecCCceEEEe-eC------CCcEEEeecCCC
Q psy12697 502 KTTIIWDA--ASG---QCEQQFSFHSAPALDVDWQSNTSFASC-ST------DQHIHVCKLHSD 553 (602)
Q Consensus 502 g~i~iwd~--~~~---~~~~~~~~~~~~v~~~~~s~~~~l~~~-~~------d~~i~iw~~~~~ 553 (602)
+.|++||+ .++ +.+..+..| ..|.+++|+|++.+++. +. +..|.+|.+...
T Consensus 330 ~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 330 KCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp SEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 99999999 565 667778877 88999999997744444 32 556889887543
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.9e-33 Score=275.62 Aligned_cols=326 Identities=11% Similarity=0.120 Sum_probs=208.7
Q ss_pred ceEEEEE---cCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeC
Q psy12697 224 EVFICAW---NPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSY 300 (602)
Q Consensus 224 ~v~~~~~---~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 300 (602)
..+.+.| +|+...+++++.++.|.+|+.................. ...+..++..+.|++..
T Consensus 17 ~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-------- 81 (393)
T 4gq1_A 17 RPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELF-------TIQTGLPTLHLSFSSSC-------- 81 (393)
T ss_dssp CEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEE-------EEECSSCEEEEEECTTC--------
T ss_pred CCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeE-------EEecCCCeeeEeecCCc--------
Confidence 4556666 34455566666788899998754432211111100000 00112334444444322
Q ss_pred CCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeE-----EeeeccCCeeeeeccC--
Q psy12697 301 DGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQ-----QFSFHSAPALDVDWQS-- 373 (602)
Q Consensus 301 dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~-----~~~~~~~~~~~~~~~~-- 373 (602)
......|........+++++++|++++.|++|++||.++++... .+.+|...|.+++|+|
T Consensus 82 -------------~~~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~ 148 (393)
T 4gq1_A 82 -------------SYSENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVY 148 (393)
T ss_dssp -------------EEECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEE
T ss_pred -------------cccccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEcccc
Confidence 11223345555666777888899999999999999999886543 3567899999999986
Q ss_pred -------CCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCC-CEEEEEECCCeEEEEeCCCCeeeEeeccc
Q psy12697 374 -------NTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQG-LLLASCSDDMTLKIWSLDKDNCVHDLQAH 445 (602)
Q Consensus 374 -------~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 445 (602)
+..+++++.|++|++||+.++.++..+..|...+.+++|+|++ .+|++++.||+|++||+++++.......+
T Consensus 149 ~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~ 228 (393)
T 4gq1_A 149 SADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQT 228 (393)
T ss_dssp CTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC--------
T ss_pred ccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCccccccccc
Confidence 3568999999999999999998888888999999999999987 48999999999999999988765554433
Q ss_pred ccc----EEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEc-cCCCEEEEEeCCCeEEEEeCCCCceeeeecc
Q psy12697 446 NKE----IYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWN-KRGNYILSAGVDKTTIIWDAASGQCEQQFSF 520 (602)
Q Consensus 446 ~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 520 (602)
... +......+.. ......+|...+.++.|+ ||++.|++++.|+.+++||+.+++....+..
T Consensus 229 ~~~~~~~~~s~~~~~~~-------------~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~ 295 (393)
T 4gq1_A 229 ELVKNPWLLTLNTLPLV-------------NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISD 295 (393)
T ss_dssp --CSCCCSEEEESGGGC-------------------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------
T ss_pred CCcccceEEecccccce-------------eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEee
Confidence 221 1111111110 112234688899999987 7999999999999999999998877766665
Q ss_pred cCCCeeEeee------------------cC--Cc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEE
Q psy12697 521 HSAPALDVDW------------------QS--NT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFE 579 (602)
Q Consensus 521 ~~~~v~~~~~------------------s~--~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 579 (602)
|...+..+.+ +| ++ ++++|+.||.|++||+.+++++..+.++. .+|.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~-----------~~V~s 364 (393)
T 4gq1_A 296 STMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLG-----------MPIVD 364 (393)
T ss_dssp --------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECS-----------SCEEE
T ss_pred ecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCC-----------CcEEE
Confidence 5554443333 33 33 56778889999999999888776665543 78999
Q ss_pred EEECCCCCeEEEeccCCeEEee
Q psy12697 580 VCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 580 l~~spdg~~l~~~~~dg~v~i~ 601 (602)
++|+|||++||+++++|.+.++
T Consensus 365 vafspdG~~LA~as~~Gv~lvr 386 (393)
T 4gq1_A 365 FCWHQDGSHLAIATEGSVLLTR 386 (393)
T ss_dssp EEECTTSSEEEEEESSEEEEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEE
Confidence 9999999999999999987765
No 113
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.7e-32 Score=265.48 Aligned_cols=266 Identities=17% Similarity=0.309 Sum_probs=216.1
Q ss_pred eecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCC----ceeEEeeeccCCeeeeeccC---CCeEEEeeCCCeEE
Q psy12697 315 STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG----QCEQQFSFHSAPALDVDWQS---NTSFASCSTDQHIH 387 (602)
Q Consensus 315 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~ 387 (602)
..+.+|...|++++|+|++++|++++.||.|++||+.++ +....+..|...+.+++|++ +..+++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 356789999999999999999999999999999999876 45667788999999999998 57799999999999
Q ss_pred EEEcCCC---------ceeeEeccCCCCeEEEEECCC--CCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECC
Q psy12697 388 VCKLHSD---------KPVKSFEGHTNEVNAIKWDPQ--GLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSP 456 (602)
Q Consensus 388 i~d~~~~---------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~ 456 (602)
+||+.++ +++..+.+|...|.+++|+|+ +++|++++.||.|++||+++++.+..+... ..+..
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~----- 158 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLT-SEMKV----- 158 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEE-EEEES-----
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccc-ccccc-----
Confidence 9999887 557888899999999999999 999999999999999999987665443311 01111
Q ss_pred CCCCCCCCCcceeeeeeeccCCccCCeEEEEEccC---CCEEEEEeCCCeEEEEeCCCCce--eeeecccCCCeeEeeec
Q psy12697 457 TGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKR---GNYILSAGVDKTTIIWDAASGQC--EQQFSFHSAPALDVDWQ 531 (602)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~---~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~s 531 (602)
.......|...+.+++|+|+ ++++++++.|+.+.+|+...++. +..+.+|...|++++|+
T Consensus 159 ---------------~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~ 223 (351)
T 3f3f_A 159 ---------------LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWA 223 (351)
T ss_dssp ---------------CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEEC
T ss_pred ---------------cccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEEC
Confidence 11122357788999999997 99999999999999998887765 67788899999999999
Q ss_pred CCc-----eEEEeeCCCcEEEeecCCCCceeeeec----------------------------------ccccceEEEEe
Q psy12697 532 SNT-----SFASCSTDQHIHVCKLHSDKPVKSFEG----------------------------------HTTGQLVHSYK 572 (602)
Q Consensus 532 ~~~-----~l~~~~~d~~i~iw~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~ 572 (602)
|++ .|++++.||.|++||+.++........ ......+..+.
T Consensus 224 p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (351)
T 3f3f_A 224 PSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD 303 (351)
T ss_dssp CCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEEC
T ss_pred CCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEe
Confidence 995 799999999999999987532221110 11123444444
Q ss_pred c-CCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 573 G-TGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 573 ~-~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
. .+.|.+++|+|++++|++++.||.|+|+
T Consensus 304 ~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw 333 (351)
T 3f3f_A 304 DHNGEVWSVSWNLTGTILSSAGDDGKVRLW 333 (351)
T ss_dssp TTSSCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred cccccEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 3 5789999999999999999999999875
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=3.9e-31 Score=260.11 Aligned_cols=307 Identities=9% Similarity=0.084 Sum_probs=236.8
Q ss_pred CeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcC
Q psy12697 153 KFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNP 232 (602)
Q Consensus 153 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~ 232 (602)
.++++++.|+.|++||+.+++.+..+. +| ..+.+++|+|
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~----------------------------------------~~-~~~~~~~~s~ 41 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIP----------------------------------------VG-SNPMGAVISP 41 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE----------------------------------------CS-SSEEEEEECT
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEee----------------------------------------cC-CCcceEEECC
Confidence 467889999999999999998875443 34 3489999999
Q ss_pred CCCEE-EEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEE-eCCCeEEEEcCC
Q psy12697 233 VKDFL-ASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATG-SYDGYARIWTSD 310 (602)
Q Consensus 233 ~~~~l-~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~~~~ 310 (602)
+++++ ++++.|+.|++||+.+++... . ......+.+++|+|++++++++ ..++.|++||..
T Consensus 42 dg~~l~~~~~~d~~i~v~d~~~~~~~~------~-----------~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~ 104 (391)
T 1l0q_A 42 DGTKVYVANAHSNDVSIIDTATNNVIA------T-----------VPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTT 104 (391)
T ss_dssp TSSEEEEEEGGGTEEEEEETTTTEEEE------E-----------EECSSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCCEEEEECCCCCeEEEEECCCCeEEE------E-----------EECCCCccceEECCCCCEEEEEECCCCEEEEEECC
Confidence 99877 667789999999998764321 0 1123479999999999988655 467999999988
Q ss_pred CcceeecccccCCeEEEEEccCCCEE-EEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCe-E-EEeeCCCeEE
Q psy12697 311 GSLKSTLGQHKGPIFALKWNKRGNYI-LSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-F-ASCSTDQHIH 387 (602)
Q Consensus 311 ~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~i~ 387 (602)
.........+...+.+++|+|+++++ ++++.++.|++||+.+++....+..+ ..+..+.|++++. + ++++.++.|+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~ 183 (391)
T 1l0q_A 105 SNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSIS 183 (391)
T ss_dssp TTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEE
Confidence 54443333455678999999999988 67788999999999999988877765 4568899999864 4 5667889999
Q ss_pred EEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEE---CCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCC
Q psy12697 388 VCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCS---DDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNP 464 (602)
Q Consensus 388 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 464 (602)
+||+.+++.+..+. +...+.+++|+|++++|++++ .++.|++||+.+++.+..+..+.
T Consensus 184 ~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~------------------ 244 (391)
T 1l0q_A 184 VIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP------------------ 244 (391)
T ss_dssp EEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS------------------
T ss_pred EEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC------------------
Confidence 99999998877766 556799999999999999988 68999999999888776654422
Q ss_pred CcceeeeeeeccCCccCCeEEEEEccCCCEE-EEEeCCCeEEEEeCCCCceeeeecccCCCee---EeeecC--------
Q psy12697 465 NMSLIFILKSTLGQHKGPIFALKWNKRGNYI-LSAGVDKTTIIWDAASGQCEQQFSFHSAPAL---DVDWQS-------- 532 (602)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~---~~~~s~-------- 532 (602)
.+.+++|+|+|++| ++++.|+.|++||+.+++.+..+..|..+.. .+.+.|
T Consensus 245 -----------------~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 307 (391)
T 1l0q_A 245 -----------------DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSA 307 (391)
T ss_dssp -----------------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBC
T ss_pred -----------------CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeeccccccccccc
Confidence 34567778888877 6778899999999999999888876655421 122221
Q ss_pred ----C----------c-eEEEeeCCCcEEEeecCCCC
Q psy12697 533 ----N----------T-SFASCSTDQHIHVCKLHSDK 554 (602)
Q Consensus 533 ----~----------~-~l~~~~~d~~i~iw~~~~~~ 554 (602)
+ . .+...+.|...++|++.++.
T Consensus 308 ~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~ 344 (391)
T 1l0q_A 308 DFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGS 344 (391)
T ss_dssp CEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSC
T ss_pred ccccccccccccccceEEEEeCCCCceEEEEECCCCc
Confidence 1 1 35556678889999987664
No 115
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2e-33 Score=275.31 Aligned_cols=343 Identities=12% Similarity=0.100 Sum_probs=213.3
Q ss_pred EEEEE---CCCCCeEEEeeCCceEEEEecCCc----------eeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccc
Q psy12697 144 YSVAF---SPDGKFLASGSFDKCVHIWSARTG----------QLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEI 210 (602)
Q Consensus 144 ~~~~~---s~d~~~l~s~~~d~~v~iwd~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (602)
.++.| +|++..|++++.|+.|++|+.... ..+..+....++..+.|.+..
T Consensus 19 ~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 81 (393)
T 4gq1_A 19 YTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSC----------------- 81 (393)
T ss_dssp EEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTC-----------------
T ss_pred eEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCc-----------------
Confidence 34555 445555566667888999976321 122233333444444444322
Q ss_pred cCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC
Q psy12697 211 PQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN 290 (602)
Q Consensus 211 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 290 (602)
......|...+....+.+++.+|++++.|++|++||...+..... . .......|...|.+++|+|
T Consensus 82 ----~~~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~--------~---~~~~~~gH~~~v~~v~~~p 146 (393)
T 4gq1_A 82 ----SYSENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQ--------H---VLGGKSGHHNFVNDIDIAD 146 (393)
T ss_dssp ----EEECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEE--------E---EECTTTSCSSCEEEEEEEE
T ss_pred ----cccccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCcccee--------e---eecccCCCCCceEEEEEcc
Confidence 123334555666667777888999999999999999887642110 0 0123345789999999998
Q ss_pred --------CCCeEEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCC-EEEEEecCCcEEEEeCCCCceeEEee
Q psy12697 291 --------NGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGN-YILSAGVDKTTIIWDAASGQCEQQFS 360 (602)
Q Consensus 291 --------~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~ 360 (602)
++++||+|+.|++|++||+. +.....+..|...+.+++|+|++. +|++++.|++|++||+++++......
T Consensus 147 ~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~ 226 (393)
T 4gq1_A 147 VYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENS 226 (393)
T ss_dssp EECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC------
T ss_pred ccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCccccccc
Confidence 78999999999999999975 556667778999999999999874 79999999999999999887665544
Q ss_pred eccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEEC-CCCCEEEEEECCCeEEEEeCCCCeee
Q psy12697 361 FHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWD-PQGLLLASCSDDMTLKIWSLDKDNCV 439 (602)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~ 439 (602)
.+........+. ++...........+|...+.++.|+ |+++.|++++.|+.+++||+..++..
T Consensus 227 ~~~~~~~~~~~s----------------~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~ 290 (393)
T 4gq1_A 227 QTELVKNPWLLT----------------LNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDY 290 (393)
T ss_dssp ----CSCCCSEE----------------EESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC------
T ss_pred ccCCcccceEEe----------------cccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCC
Confidence 332221111110 0111111122335688889999987 79999999999999999999998888
Q ss_pred EeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeee
Q psy12697 440 HDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQF 518 (602)
Q Consensus 440 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 518 (602)
..+..+...+..+.+.|+.... ..+...+..+.+.+ ++.++++|+.||.|++||+.++++...+
T Consensus 291 ~~l~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~ 355 (393)
T 4gq1_A 291 NEISDSTMKLGPKNLLPNVQGI---------------SLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIP 355 (393)
T ss_dssp -------------CCSCSEEEE---------------CSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEE
T ss_pred ceEeeecCccccEEEccccccc---------------cccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEe
Confidence 8888888888877777764321 11222333333333 4456778889999999999999999888
Q ss_pred cccCCCeeEeeecCCc-eEEEeeCCCcEEEeec
Q psy12697 519 SFHSAPALDVDWQSNT-SFASCSTDQHIHVCKL 550 (602)
Q Consensus 519 ~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~ 550 (602)
..|..+|.+++|+||| +||+++.+| +.+|++
T Consensus 356 ~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 356 IQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 8999999999999999 888887665 666664
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=6.6e-31 Score=258.49 Aligned_cols=333 Identities=14% Similarity=0.117 Sum_probs=251.0
Q ss_pred eccceeeeecccceeeeeeeccCCceEEEEECCCCCeE-EEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCC
Q psy12697 118 HRLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFL-ASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPP 196 (602)
Q Consensus 118 ~~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l-~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (602)
.+++|++||+.+++.+..+.+|.. +.+++|+|++++| ++++.|+.|++||+.+++.+..+.
T Consensus 10 ~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~----------------- 71 (391)
T 1l0q_A 10 ESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP----------------- 71 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-----------------
T ss_pred CCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE-----------------
Confidence 357899999999999999998865 8999999999977 677799999999999998875543
Q ss_pred CCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEe-eCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCc
Q psy12697 197 NPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASG-SGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGT 275 (602)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (602)
+...+.+++|+|++++|+++ +.++.|++||+.+++... ..
T Consensus 72 ------------------------~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~------~~--------- 112 (391)
T 1l0q_A 72 ------------------------AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG------TV--------- 112 (391)
T ss_dssp ------------------------CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE------EE---------
T ss_pred ------------------------CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEE------EE---------
Confidence 22389999999999987654 567999999998764311 10
Q ss_pred ccCCCCceeEEeeCCCCCeE-EEEeCCCeEEEEcCCC-cceeecccccCCeEEEEEccCCCEE-EEEecCCcEEEEeCCC
Q psy12697 276 EVPSNKDVTSLDWNNNGSFL-ATGSYDGYARIWTSDG-SLKSTLGQHKGPIFALKWNKRGNYI-LSAGVDKTTIIWDAAS 352 (602)
Q Consensus 276 ~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~~wd~~~ 352 (602)
.+...+.+++|+|+++.+ ++++.++.|++||... +....+.. ...+.+++|+|+++++ ++++.++.|++||+++
T Consensus 113 --~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~ 189 (391)
T 1l0q_A 113 --KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV-GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189 (391)
T ss_dssp --ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred --eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 123568999999999977 6778899999999864 44444444 4567999999999988 5677889999999999
Q ss_pred CceeEEeeeccCCeeeeeccCCCe-EEEee---CCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEE-EEEECCCe
Q psy12697 353 GQCEQQFSFHSAPALDVDWQSNTS-FASCS---TDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLL-ASCSDDMT 427 (602)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~ 427 (602)
++....+.. ...+..++|++++. +++++ .++.|++||+.+++.+..+..|. .+.+++|+|++++| ++++.|+.
T Consensus 190 ~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~ 267 (391)
T 1l0q_A 190 NSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNT 267 (391)
T ss_dssp TEEEEEEEC-SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTE
T ss_pred CeEEEEEec-CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCE
Confidence 988777654 45778899999864 56665 68999999999999888888765 57899999999987 56688999
Q ss_pred EEEEeCCCCeeeEeeccccccEE---EEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEc------cCC--CEEE
Q psy12697 428 LKIWSLDKDNCVHDLQAHNKEIY---TIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWN------KRG--NYIL 496 (602)
Q Consensus 428 i~iwd~~~~~~~~~~~~~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s------~~~--~~l~ 496 (602)
|++||+.+++.+..+..+..+.. .+.+.|++... ++...... |.. ..+.
T Consensus 268 v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~a~fs~~~~~~~~~~~~~~~~~ 327 (391)
T 1l0q_A 268 VSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVY--------------------PSADFKSNITSGYIFLSEPVQFT 327 (391)
T ss_dssp EEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCC--------------------CBCCEEESCCSSEEETTCCEEEE
T ss_pred EEEEECCCCcEEEEEECCcCCCccceeeecccccccc--------------------cccccccccccccccccceEEEE
Confidence 99999999999888876654432 23444433221 11111111 111 3456
Q ss_pred EEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEE
Q psy12697 497 SAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFAS 538 (602)
Q Consensus 497 s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~ 538 (602)
..+.|..+++||+.++... .+..+ ...|+++| +.++
T Consensus 328 ~~~~~~~~~~W~~~~g~~~----~~~~~--~~~~~~~g~y~~~ 364 (391)
T 1l0q_A 328 DLSKDATEWKWDFGDGSSS----KKQNP--THTYSETGIYTVR 364 (391)
T ss_dssp ECCBSCSEEEEECSSSCEE----CSSSC--EECCSSCEEEEEE
T ss_pred eCCCCceEEEEECCCCccc----CcCCC--eEEeCCCceEEEE
Confidence 6677899999999887642 12233 46799999 5554
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=8.5e-31 Score=261.50 Aligned_cols=272 Identities=10% Similarity=0.042 Sum_probs=225.6
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCC-Cccee-----ecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCc
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKS-----TLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ 354 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~-----~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 354 (602)
..+.+++|+|++.++++++.++.|++||.. ++... .+..|...|.+++|+++++.+++++.|+.|++||+++++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 456799999988888888889999999987 44444 345788899999999999999999999999999999999
Q ss_pred eeEEeeeccCCeeeeeccCCCe-E-EEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEE--------C
Q psy12697 355 CEQQFSFHSAPALDVDWQSNTS-F-ASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCS--------D 424 (602)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------~ 424 (602)
....+..+...+.+++|++++. + ++++.++.|++||+.+++.+..+..+ ..+.+++|+|++++|++++ .
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 281 (433)
T 3bws_A 203 YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESG 281 (433)
T ss_dssp EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSC
T ss_pred EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccC
Confidence 9999888889999999999864 4 45557999999999999888877754 4599999999999999988 5
Q ss_pred CCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEE-EEEeCCCe
Q psy12697 425 DMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYI-LSAGVDKT 503 (602)
Q Consensus 425 dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l-~s~~~dg~ 503 (602)
||.|++||+.+++.+..+. +...+.+++|+|+++++ ++++.|+.
T Consensus 282 dg~i~~~d~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~g~~l~~~~~~~~~ 326 (433)
T 3bws_A 282 GGRLGIYSMDKEKLIDTIG-----------------------------------PPGNKRHIVSGNTENKIYVSDMCCSK 326 (433)
T ss_dssp CEEEEEEETTTTEEEEEEE-----------------------------------EEECEEEEEECSSTTEEEEEETTTTE
T ss_pred CCeEEEEECCCCcEEeecc-----------------------------------CCCCcceEEECCCCCEEEEEecCCCE
Confidence 8899999999887655432 23345677788888754 66688999
Q ss_pred EEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeC---------------CCcEEEeecCCCCceeeeecccccce
Q psy12697 504 TIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCST---------------DQHIHVCKLHSDKPVKSFEGHTTGQL 567 (602)
Q Consensus 504 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~---------------d~~i~iw~~~~~~~~~~~~~~~~~~~ 567 (602)
|++||+.+++.+..+. +...+.+++|+|++ .+++++. ||.|++||+.+++.+..+..
T Consensus 327 v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~------ 399 (433)
T 3bws_A 327 IEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA------ 399 (433)
T ss_dssp EEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC------
T ss_pred EEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC------
Confidence 9999999998888776 67789999999999 7777766 57999999877766655543
Q ss_pred EEEEecCCcEEEEEECCCCCeEEEecc-CCeEEee
Q psy12697 568 VHSYKGTGGIFEVCWNSRGDKVGASAS-DGSVFKN 601 (602)
Q Consensus 568 ~~~~~~~~~i~~l~~spdg~~l~~~~~-dg~v~i~ 601 (602)
...+.+++|+|||++|++++. |+.|++.
T Consensus 400 ------~~~~~~~~~s~dg~~l~~~~~~d~~i~v~ 428 (433)
T 3bws_A 400 ------GNQPTGLDVSPDNRYLVISDFLDHQIRVY 428 (433)
T ss_dssp ------SSSEEEEEECTTSCEEEEEETTTTEEEEE
T ss_pred ------CCCCceEEEcCCCCEEEEEECCCCeEEEE
Confidence 356899999999999998875 9998874
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-32 Score=264.71 Aligned_cols=273 Identities=12% Similarity=0.045 Sum_probs=213.7
Q ss_pred EECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcceE
Q psy12697 147 AFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVF 226 (602)
Q Consensus 147 ~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~ 226 (602)
.+.+++++|++|+.||+|++||+.+++.+..+. ...|.
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~------------------------------------------~~~v~ 80 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT------------------------------------------TPNPR 80 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE------------------------------------------EECCC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe------------------------------------------cCCce
Confidence 455688999999999999999999988775542 23455
Q ss_pred EEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEE
Q psy12697 227 ICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARI 306 (602)
Q Consensus 227 ~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 306 (602)
++.|+|+ +++++.|++|++|+... .+.+
T Consensus 81 ~~~~~~~---~~s~s~D~~i~~w~~~~-------------------------------------------------~~~~ 108 (343)
T 3lrv_A 81 TGGEHPA---IISRGPCNRLLLLYPGN-------------------------------------------------QITI 108 (343)
T ss_dssp TTCCCCS---EEEECSTTEEEEEETTT-------------------------------------------------EEEE
T ss_pred eeeeCCc---eEEecCCCeEEEEEccC-------------------------------------------------ceEE
Confidence 6677777 89999999999998642 2344
Q ss_pred EcCCCcc-eee-cccccCCeEEEEEcc--CCCEEEEEecCCcEEEEeCCCCceeEEeee-ccCCeeeeeccCCCe-EEEe
Q psy12697 307 WTSDGSL-KST-LGQHKGPIFALKWNK--RGNYILSAGVDKTTIIWDAASGQCEQQFSF-HSAPALDVDWQSNTS-FASC 380 (602)
Q Consensus 307 ~~~~~~~-~~~-~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~ 380 (602)
|+..... ... ...|...|.+++|+| +++++++++.||.|++||+++++....... +...+.+++|+|++. +++|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 109 LDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp EETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEE
T ss_pred eecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 5544222 222 235778899999999 999999999999999999999988766543 455799999999865 6678
Q ss_pred eCCCeEEEEEcCCCcee-eEecc-CCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCC
Q psy12697 381 STDQHIHVCKLHSDKPV-KSFEG-HTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTG 458 (602)
Q Consensus 381 ~~~~~i~i~d~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~ 458 (602)
+.||.|++||+++++.+ ..+.. |...|++++|+|++.+|+++++ +.|++||+++++.+..+..+..
T Consensus 189 ~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~----------- 256 (343)
T 3lrv_A 189 SPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCFDLRKDVGTLAYPTYTI----------- 256 (343)
T ss_dssp CTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEEETTSSTTCBSSCCCBC-----------
T ss_pred cCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCCCcceeeccccc-----------
Confidence 99999999999999887 78888 9999999999999999999995 5999999998876655443211
Q ss_pred CCCCCCCcceeeeeeeccCCccCCe--EEEEEccCCCEEEEEeC-CCeEEEEeCCCCceeeeecccCCCeeEeeecC---
Q psy12697 459 PETSNPNMSLIFILKSTLGQHKGPI--FALKWNKRGNYILSAGV-DKTTIIWDAASGQCEQQFSFHSAPALDVDWQS--- 532 (602)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~v--~~i~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~--- 532 (602)
|...+ .+++|+|+|++|++++. |+.|++|++.+....... .++..++|+|
T Consensus 257 --------------------~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~ 312 (343)
T 3lrv_A 257 --------------------PEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTA 312 (343)
T ss_dssp -------------------------CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----C
T ss_pred --------------------ccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCcccc
Confidence 11222 46899999999999998 999999999766543332 5678899998
Q ss_pred Cc-eEEEeeCCCcEEEee
Q psy12697 533 NT-SFASCSTDQHIHVCK 549 (602)
Q Consensus 533 ~~-~l~~~~~d~~i~iw~ 549 (602)
+. .+++++.|+.+.++-
T Consensus 313 ~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 313 DFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp CCCEEEEEEETTEEEEEE
T ss_pred ccceeEEEecCCceEEEE
Confidence 77 899999999999885
No 119
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=6e-32 Score=246.95 Aligned_cols=276 Identities=15% Similarity=0.144 Sum_probs=195.3
Q ss_pred eccceeeeecccc---eeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCC
Q psy12697 118 HRLTLPLWDVERG---ECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGT 194 (602)
Q Consensus 118 ~~~~i~vwd~~~~---~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (602)
-+.+|++|++.++ ++++++++|..+|..+.|.||-.-|+...-.
T Consensus 61 ~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--------------------------------- 107 (356)
T 2w18_A 61 CEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALG--------------------------------- 107 (356)
T ss_dssp ESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEEC---------------------------------
T ss_pred ccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeec---------------------------------
Confidence 3578999999999 9999999999999999999987644433110
Q ss_pred CCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCC----CCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEe
Q psy12697 195 PPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPV----KDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCI 270 (602)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~----~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 270 (602)
.-+...|..++|+|+ +..+++++.+ +++|++.+
T Consensus 108 ------------------------~~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~----------------- 144 (356)
T 2w18_A 108 ------------------------NLEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTK----------------- 144 (356)
T ss_dssp ------------------------SSSEEEEEEECC------CCEEEEEEEEE--EEEEEETT-----------------
T ss_pred ------------------------cccccceEEEEECCCccccccEEEeCCCe--EEEEecCC-----------------
Confidence 115667999999999 8899998754 77787632
Q ss_pred cCCCcccCCCCceeEEeeCCCCCeEEEEe--CCCeEEEEcCC--CcceeecccccCCeEEEEEcc---CCCEEEEEecCC
Q psy12697 271 SKGGTEVPSNKDVTSLDWNNNGSFLATGS--YDGYARIWTSD--GSLKSTLGQHKGPIFALKWNK---RGNYILSAGVDK 343 (602)
Q Consensus 271 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~~~~--~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg 343 (602)
++++.++. .|+.|++|++. ++....+..|...+..++|++ ++..|++++.|+
T Consensus 145 ---------------------g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~ 203 (356)
T 2w18_A 145 ---------------------RRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMN 203 (356)
T ss_dssp ---------------------TEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTS
T ss_pred ---------------------CcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCC
Confidence 33344422 47788888763 556667778999999999999 779999999999
Q ss_pred cEEEEeCCCCceeEEeeeccC---CeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEE
Q psy12697 344 TTIIWDAASGQCEQQFSFHSA---PALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLA 420 (602)
Q Consensus 344 ~i~~wd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 420 (602)
+|++||++++++++.+..+.. .+.+++|+|++.+++.... .. ....++
T Consensus 204 TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~--------------------~~---------~~w~la 254 (356)
T 2w18_A 204 NIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSH--------------------PC---------AKESES 254 (356)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC--------------------------------------
T ss_pred cEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEecc--------------------CC---------Ccceee
Confidence 999999999999888865432 2333445555443222110 00 011357
Q ss_pred EEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeC
Q psy12697 421 SCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGV 500 (602)
Q Consensus 421 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~ 500 (602)
+|+.|++|++||..+++.+..+. +.+ |+ +|...+.+..+ ++.++++++.
T Consensus 255 SGs~D~tIklWd~~tgk~l~v~~--------~~~-p~--------------------Gh~~~~lsg~~--sg~~lASgS~ 303 (356)
T 2w18_A 255 LRSPVFQLIVINPKTTLSVGVML--------YCL-PP--------------------GQAGRFLEGDV--KDHCAAAILT 303 (356)
T ss_dssp ---CCEEEEEEETTTTEEEEEEE--------ECC-CT--------------------TCCCCEEEEEE--ETTEEEEEET
T ss_pred ccCCCcEEEEEECCCCEEEEEEE--------eec-cC--------------------CCcceeEcccc--CCCEEEEEcC
Confidence 89999999999999988775431 111 22 23333333333 3788999999
Q ss_pred CCeEEEEeCCCCceeeeecccCCCee-EeeecCCc-eEEEeeCCCcEEEeec
Q psy12697 501 DKTTIIWDAASGQCEQQFSFHSAPAL-DVDWQSNT-SFASCSTDQHIHVCKL 550 (602)
Q Consensus 501 dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~s~~~-~l~~~~~d~~i~iw~~ 550 (602)
|++|+|||+.+++++.++.+|...+. .++|+||| +|++|+.|++|+|||+
T Consensus 304 DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 304 SGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99999999999999999999988765 58999999 9999999999999995
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=8.3e-32 Score=259.99 Aligned_cols=295 Identities=17% Similarity=0.199 Sum_probs=214.2
Q ss_pred CCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEE-EEEecCCcEEEEeCCCCcee
Q psy12697 278 PSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYI-LSAGVDKTTIIWDAASGQCE 356 (602)
Q Consensus 278 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~ 356 (602)
.|...|.+++|+|+|++|++|+.+| +++|+.+....... .+...+..+++.++++.+ ++++.|+.|++||+.+++.+
T Consensus 17 ~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~ 94 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMS-QEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDV 94 (355)
T ss_dssp --CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEE-EECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeee-eecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEE
Confidence 3578899999999999999998776 78999774332222 222357888899988887 46777899999999999998
Q ss_pred EEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCC-ceeeEeccCCCCeEEEEECCCCCEEEE--EECCCeEEEEeC
Q psy12697 357 QQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSD-KPVKSFEGHTNEVNAIKWDPQGLLLAS--CSDDMTLKIWSL 433 (602)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~dg~i~iwd~ 433 (602)
..+. +...+.++.++++..+++ .++.|++||+.++ +.+..+.. ....+++++ .++++ |+.||.|++||+
T Consensus 95 ~~~~-~~~~v~~v~~~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~ 166 (355)
T 3vu4_A 95 SRIK-VDAPVKDLFLSREFIVVS--YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKL 166 (355)
T ss_dssp EEEE-CSSCEEEEEECSSEEEEE--ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEEC
T ss_pred EEEE-CCCceEEEEEcCCEEEEE--EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEEC
Confidence 8887 556899999988765443 4789999999988 66666654 445566777 56666 578999999999
Q ss_pred CCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCe-EEEEeCCCC
Q psy12697 434 DKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKT-TIIWDAASG 512 (602)
Q Consensus 434 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~-i~iwd~~~~ 512 (602)
.++.......... .... .......+.+|...|.+++|+|+|++|++|+.||+ |++||+.++
T Consensus 167 ~~~~~~~~~~~~~---~~~~---------------~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~ 228 (355)
T 3vu4_A 167 QSSGSATTQDQGV---QQKA---------------ILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG 228 (355)
T ss_dssp CC------------------------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC
T ss_pred CCCCccccccccc---cccc---------------cCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 8765322111000 0000 00002345678999999999999999999999998 999999999
Q ss_pred ceeeeec-c-cCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCce--eeeecc-----cc---cceEEEEec--CCcE
Q psy12697 513 QCEQQFS-F-HSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPV--KSFEGH-----TT---GQLVHSYKG--TGGI 577 (602)
Q Consensus 513 ~~~~~~~-~-~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~--~~~~~~-----~~---~~~~~~~~~--~~~i 577 (602)
+++..+. + |...|.+++|+|++ +|++++.|+.|++||+..+... ..+... .. ......+.. ..+.
T Consensus 229 ~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (355)
T 3vu4_A 229 VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRG 308 (355)
T ss_dssp CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCC
T ss_pred cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCc
Confidence 9999998 5 99999999999999 9999999999999999876321 111110 00 000011111 2234
Q ss_pred EEEEECCCCCeEEEeccCCeEEe
Q psy12697 578 FEVCWNSRGDKVGASASDGSVFK 600 (602)
Q Consensus 578 ~~l~~spdg~~l~~~~~dg~v~i 600 (602)
..++|+|||++|++++.||.+++
T Consensus 309 ~~~a~~~d~~~l~~~~~dg~~~~ 331 (355)
T 3vu4_A 309 CKIAWISESSLVVVWPHTRMIET 331 (355)
T ss_dssp CEEEESSSSEEEEEETTTTEEEE
T ss_pred eEEEEeCCCCEEEEEeCCCeEEE
Confidence 67999999999999999998875
No 121
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=7.1e-32 Score=268.10 Aligned_cols=253 Identities=22% Similarity=0.367 Sum_probs=204.9
Q ss_pred eecccccCCeEEEEEccC-CCEEEEEecCCcEEEEeCCC----------CceeEEeeeccCCeeeeeccCCC--eEEEee
Q psy12697 315 STLGQHKGPIFALKWNKR-GNYILSAGVDKTTIIWDAAS----------GQCEQQFSFHSAPALDVDWQSNT--SFASCS 381 (602)
Q Consensus 315 ~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~~wd~~~----------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 381 (602)
.....|.+.|++++|+|+ +++|++++.+|.|++||+.+ ......+..|...+.+++|++++ .+++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 344578999999999997 67899999999999999986 57778888999999999999974 689999
Q ss_pred CCCeEEEEEcCCCce-------eeEeccCCCCeEEEEECC-CCCEEEEEECCCeEEEEeCCCCe---eeEeeccccccEE
Q psy12697 382 TDQHIHVCKLHSDKP-------VKSFEGHTNEVNAIKWDP-QGLLLASCSDDMTLKIWSLDKDN---CVHDLQAHNKEIY 450 (602)
Q Consensus 382 ~~~~i~i~d~~~~~~-------~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~i~ 450 (602)
.||.|++|++..+.. ...+.+|...|.+++|+| ++.+|++++.||.|++||++++. .+..+.
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~------- 274 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD------- 274 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-------
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-------
Confidence 999999999987432 456778999999999999 78899999999999999999762 333333
Q ss_pred EEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCC-EEEEEeCCCeEEEEeCCC-CceeeeecccCCCeeEe
Q psy12697 451 TIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGN-YILSAGVDKTTIIWDAAS-GQCEQQFSFHSAPALDV 528 (602)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~ 528 (602)
.|...|++++|+|+++ +|++|+.||.|++||+++ +.++..+..|...|.++
T Consensus 275 ---------------------------~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i 327 (430)
T 2xyi_A 275 ---------------------------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 327 (430)
T ss_dssp ---------------------------CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEE
T ss_pred ---------------------------cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEE
Confidence 3556677777777776 688999999999999998 56788899999999999
Q ss_pred eecCCc--eEEEeeCCCcEEEeecCCCCceeeeecccc--cceEEEEec-CCcEEEEEECCCCC-eEEEeccCCeEEee
Q psy12697 529 DWQSNT--SFASCSTDQHIHVCKLHSDKPVKSFEGHTT--GQLVHSYKG-TGGIFEVCWNSRGD-KVGASASDGSVFKN 601 (602)
Q Consensus 529 ~~s~~~--~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~i~~l~~spdg~-~l~~~~~dg~v~i~ 601 (602)
+|+|++ .|++++.|+.|+|||+.............. ...+..+.+ ...|.+++|+|+++ +|++++.||.|+|.
T Consensus 328 ~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw 406 (430)
T 2xyi_A 328 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVW 406 (430)
T ss_dssp EECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred EECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEe
Confidence 999998 689999999999999976322111100000 123333333 36799999999999 89999999999874
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-31 Score=267.83 Aligned_cols=269 Identities=13% Similarity=0.121 Sum_probs=216.1
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCC-Cc---ceeecc--------------------------------------
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSD-GS---LKSTLG-------------------------------------- 318 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~---~~~~~~-------------------------------------- 318 (602)
.++.+++|+|+|++|+++ .++.|++||.. ++ ....+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 568999999999966555 67899999965 44 333322
Q ss_pred ----------------cccCCeEEEEEccCCCEE-EEEecCCcEEEEeCC--CCceeEEee--eccCCeeeeeccCCC-e
Q psy12697 319 ----------------QHKGPIFALKWNKRGNYI-LSAGVDKTTIIWDAA--SGQCEQQFS--FHSAPALDVDWQSNT-S 376 (602)
Q Consensus 319 ----------------~~~~~i~~~~~~~~~~~l-~~~~~dg~i~~wd~~--~~~~~~~~~--~~~~~~~~~~~~~~~-~ 376 (602)
.|...|.+++|+|++++| ++++.||.|++||+. +++....+. .+...+.+++|+|++ .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 233479999999999996 889899999999999 888888776 456889999999985 5
Q ss_pred EEEeeCCCeEEEEEcCCCceee----EeccCCCCeEEEEECCC---CCEEEEEECCCeEEEEeCCCCeeeEeeccccccE
Q psy12697 377 FASCSTDQHIHVCKLHSDKPVK----SFEGHTNEVNAIKWDPQ---GLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEI 449 (602)
Q Consensus 377 ~~~~~~~~~i~i~d~~~~~~~~----~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i 449 (602)
+++++.+|.+++|++.+++... .+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~------- 236 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW------- 236 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE-------
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee-------
Confidence 8888999999999998877554 77889999999999999 999999999999999999887665542
Q ss_pred EEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccc--------
Q psy12697 450 YTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH-------- 521 (602)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------- 521 (602)
+.+|...|.+++|+ ++++|++++.|+.|++||+.+++++..+..+
T Consensus 237 --------------------------~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~ 289 (450)
T 2vdu_B 237 --------------------------LFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLN 289 (450)
T ss_dssp --------------------------CCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCC
T ss_pred --------------------------ecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhh
Confidence 22467788888899 9999999999999999999999988877632
Q ss_pred -----------------CCCeeEeeecCCc-eEEEee-CCCcEEEeec--CCCCceeeeecccccceEEEEecCCcEEEE
Q psy12697 522 -----------------SAPALDVDWQSNT-SFASCS-TDQHIHVCKL--HSDKPVKSFEGHTTGQLVHSYKGTGGIFEV 580 (602)
Q Consensus 522 -----------------~~~v~~~~~s~~~-~l~~~~-~d~~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 580 (602)
...|.+++|+|++ ++++++ .|+.|++|++ .++..+ ..+..+..++.|.++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l---------~~~~~~~~~~~v~~~ 360 (450)
T 2vdu_B 290 DQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDL---------ALKQIITFPYNVISL 360 (450)
T ss_dssp TTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCE---------EEEEEEECSSCEEEE
T ss_pred hcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCce---------eeccEeccCCceEEE
Confidence 3568999999999 888888 8999999998 443211 222334445779999
Q ss_pred EECCCCCeEEEec
Q psy12697 581 CWNSRGDKVGASA 593 (602)
Q Consensus 581 ~~spdg~~l~~~~ 593 (602)
+|+|++.++++++
T Consensus 361 ~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 361 SAHNDEFQVTLDN 373 (450)
T ss_dssp EEETTEEEEEECC
T ss_pred EecCCcEEEEEec
Confidence 9999654444444
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=4.2e-31 Score=263.71 Aligned_cols=301 Identities=14% Similarity=0.065 Sum_probs=238.0
Q ss_pred ceeeeecccc--eeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCC
Q psy12697 121 TLPLWDVERG--ECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNP 198 (602)
Q Consensus 121 ~i~vwd~~~~--~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (602)
.|.+||..++ +.+..+..+. .+.+++|+|+++++++++.|+.|++||+.+++.+.....
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~------------------ 162 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPP------------------ 162 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCC------------------
T ss_pred EEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCc------------------
Confidence 4555555445 6667776654 456999999888899999999999999999987753321
Q ss_pred CCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccC
Q psy12697 199 PESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVP 278 (602)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (602)
..+.+|...|.+++|+|++.++++++.|+.|++||+.+++.... . ..
T Consensus 163 -----------------~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~-----~-----------~~ 209 (433)
T 3bws_A 163 -----------------EKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKAT-----V-----------DL 209 (433)
T ss_dssp -----------------HHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEE-----E-----------EC
T ss_pred -----------------ccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEE-----E-----------cC
Confidence 13457899999999999999999999999999999986543210 0 12
Q ss_pred CCCceeEEeeCCCCCeEEEE-eCCCeEEEEcCCC-cceeecccccCCeEEEEEccCCCEEEEEe--------cCCcEEEE
Q psy12697 279 SNKDVTSLDWNNNGSFLATG-SYDGYARIWTSDG-SLKSTLGQHKGPIFALKWNKRGNYILSAG--------VDKTTIIW 348 (602)
Q Consensus 279 ~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------~dg~i~~w 348 (602)
+...+.+++|+|+++.++++ +.++.|++||+.. .....+. +...+.+++|+|+++++++++ .|+.|++|
T Consensus 210 ~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~ 288 (433)
T 3bws_A 210 TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD-KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIY 288 (433)
T ss_dssp SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC-CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEE
T ss_pred CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec-CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEE
Confidence 35779999999999988554 4799999999864 4444444 345699999999999999888 48899999
Q ss_pred eCCCCceeEEeeeccCCeeeeeccCCC--eEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEEC--
Q psy12697 349 DAASGQCEQQFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSD-- 424 (602)
Q Consensus 349 d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-- 424 (602)
|+.+++....+. +...+..++|+|++ .+++++.++.|++||+.+++.+..+. +...+.+++|+|++++|++++.
T Consensus 289 d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~ 366 (433)
T 3bws_A 289 SMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGP 366 (433)
T ss_dssp ETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCC
T ss_pred ECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCC
Confidence 999988776653 34477889999986 34666889999999999998887776 6778999999999999998887
Q ss_pred -------------CCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccC
Q psy12697 425 -------------DMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKR 491 (602)
Q Consensus 425 -------------dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~ 491 (602)
||.|++||+.+++.+..+.. ...+.+++|+|+
T Consensus 367 ~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-----------------------------------~~~~~~~~~s~d 411 (433)
T 3bws_A 367 NHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-----------------------------------GNQPTGLDVSPD 411 (433)
T ss_dssp CCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-----------------------------------SSSEEEEEECTT
T ss_pred CccccccccccccceEEEEEECCCCcEEEEecC-----------------------------------CCCCceEEEcCC
Confidence 57999999999887766543 234667788889
Q ss_pred CCEEEEEeC-CCeEEEEeCCC
Q psy12697 492 GNYILSAGV-DKTTIIWDAAS 511 (602)
Q Consensus 492 ~~~l~s~~~-dg~i~iwd~~~ 511 (602)
|++|++++. |+.|++|+++.
T Consensus 412 g~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 412 NRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SCEEEEEETTTTEEEEEEETT
T ss_pred CCEEEEEECCCCeEEEEEecC
Confidence 999988875 99999999863
No 124
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.5e-31 Score=265.76 Aligned_cols=242 Identities=26% Similarity=0.470 Sum_probs=206.4
Q ss_pred cCCCCceeEEeeCCC-CCeEEEEeCCCeEEEEcCCC-----------cceeecccccCCeEEEEEccCCC-EEEEEecCC
Q psy12697 277 VPSNKDVTSLDWNNN-GSFLATGSYDGYARIWTSDG-----------SLKSTLGQHKGPIFALKWNKRGN-YILSAGVDK 343 (602)
Q Consensus 277 ~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~~~~~-----------~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg 343 (602)
..|...|++++|+|+ +.+|++++.+|.|++|++.. .....+..|...|.+++|+|++. +|++++.||
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 346789999999997 78999999999999999763 55667788999999999999998 999999999
Q ss_pred cEEEEeCCCCce-------eEEeeeccCCeeeeeccC-C-CeEEEeeCCCeEEEEEcCCC---ceeeEeccCCCCeEEEE
Q psy12697 344 TTIIWDAASGQC-------EQQFSFHSAPALDVDWQS-N-TSFASCSTDQHIHVCKLHSD---KPVKSFEGHTNEVNAIK 411 (602)
Q Consensus 344 ~i~~wd~~~~~~-------~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~i~i~d~~~~---~~~~~~~~~~~~i~~~~ 411 (602)
.|++||+..+.. ...+..|...+.+++|+| + ..+++++.++.|++||++++ +++..+..|...|++++
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 284 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLS 284 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEE
Confidence 999999987432 345667888999999998 3 56889999999999999987 57788889999999999
Q ss_pred ECCCCC-EEEEEECCCeEEEEeCCC-CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEc
Q psy12697 412 WDPQGL-LLASCSDDMTLKIWSLDK-DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWN 489 (602)
Q Consensus 412 ~~~~~~-~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s 489 (602)
|+|++. +|++|+.||.|++||+++ ..++..+.. |...|.+++|+
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~----------------------------------h~~~v~~i~~s 330 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFES----------------------------------HKDEIFQVQWS 330 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC----------------------------------CSSCEEEEEEC
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec----------------------------------CCCCEEEEEEC
Confidence 999887 689999999999999987 344555544 45556666666
Q ss_pred cCCC-EEEEEeCCCeEEEEeCCC--------------CceeeeecccCCCeeEeeecCCc--eEEEeeCCCcEEEeecCC
Q psy12697 490 KRGN-YILSAGVDKTTIIWDAAS--------------GQCEQQFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHS 552 (602)
Q Consensus 490 ~~~~-~l~s~~~dg~i~iwd~~~--------------~~~~~~~~~~~~~v~~~~~s~~~--~l~~~~~d~~i~iw~~~~ 552 (602)
|+++ +|++++.||.|++||+.. .+++..+.+|...|.+++|+|++ .+++++.||.|+||++..
T Consensus 331 p~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 331 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp SSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 6764 699999999999999987 36677888899999999999998 789999999999999864
No 125
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=6.3e-31 Score=289.98 Aligned_cols=417 Identities=10% Similarity=0.043 Sum_probs=302.2
Q ss_pred cCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCc------cccccccccC
Q psy12697 139 HTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESM------EVDASIEIPQ 212 (602)
Q Consensus 139 h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 212 (602)
+...+.+.+||| +.||.++. +.|.+|++.+++..........+..++|+|+|+.++..... .....+....
T Consensus 13 ~~~~~~~~~~S~--~~iaf~~~-~~l~~~~~~gg~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~ 89 (1045)
T 1k32_A 13 MPNLLLNPDIHG--DRIIFVCC-DDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGEN 89 (1045)
T ss_dssp CCCCCEEEEEET--TEEEEEET-TEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTT
T ss_pred ccceEeCcEEeC--CEEEEEEC-CcEEEEECCCCcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCC
Confidence 466788999995 57887765 68999999988876655566778999999999987755332 1122334455
Q ss_pred CcceEeeCCCcce-------EEEEEcCCCCEEEEeeCC------CcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCC
Q psy12697 213 SKATKLIGHESEV-------FICAWNPVKDFLASGSGD------STARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPS 279 (602)
Q Consensus 213 ~~~~~l~~h~~~v-------~~~~~~~~~~~l~s~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (602)
.....+..|...+ ..++|+|||+.+++++.+ ..|.+|++.++.... + .
T Consensus 90 g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~-----------l--------~ 150 (1045)
T 1k32_A 90 GEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVP-----------L--------N 150 (1045)
T ss_dssp TEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEE-----------C--------C
T ss_pred CCeEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEE-----------e--------c
Confidence 5677888899888 999999999977777654 346777775543110 0 0
Q ss_pred CCceeEEeeCCCCCeEEEEeC------------CCeEEEEcC-CCcceeecccccCCeEEEEEccCCCEEEEEecCCcEE
Q psy12697 280 NKDVTSLDWNNNGSFLATGSY------------DGYARIWTS-DGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTI 346 (602)
Q Consensus 280 ~~~i~~~~~~~~~~~l~~~~~------------dg~i~i~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 346 (602)
......++|+| | ++++++. +....+|.. .+.....+..|...+.++.|+++ ..+++++.++.+.
T Consensus 151 ~~~~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~ 227 (1045)
T 1k32_A 151 LGPATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQ 227 (1045)
T ss_dssp SCSCSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCE
T ss_pred CCCcceeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceE
Confidence 12245677999 8 8887653 223455532 12444555889999999999988 6667778889999
Q ss_pred EEeCCC-CceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEecc-----------CCCCeEEEEEC-
Q psy12697 347 IWDAAS-GQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEG-----------HTNEVNAIKWD- 413 (602)
Q Consensus 347 ~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-----------~~~~i~~~~~~- 413 (602)
+|.+.. +.....+..+. .+....|+|++..++...++.|++|++...+ +..+.. |...+.+++|+
T Consensus 228 l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~ 305 (1045)
T 1k32_A 228 IYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSKGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSP 305 (1045)
T ss_dssp EEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEE
T ss_pred EEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEeCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecC
Confidence 997653 33344444443 3556688998775544579999999995443 335544 34468999999
Q ss_pred CCCCEEEEEECCCeEEEEeCCCCeeeEeeccccc-cEEEEEECCCCCCCCCCC-cceee-eee------eccCCccCCeE
Q psy12697 414 PQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNK-EIYTIKWSPTGPETSNPN-MSLIF-ILK------STLGQHKGPIF 484 (602)
Q Consensus 414 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~-~~~~~-~~~------~~~~~~~~~v~ 484 (602)
|+|++|++++ ++.|.+|++..++.. .+..+.. .+..++|+ ++..++... ...++ .+. ..+..|...+.
T Consensus 306 pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~ 382 (1045)
T 1k32_A 306 LDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVF 382 (1045)
T ss_dssp CGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEE
T ss_pred CCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCcccee
Confidence 9999999988 789999999877644 3556666 88999999 876443221 12222 111 12336778899
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCC----------cEEEeecCCC
Q psy12697 485 ALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQ----------HIHVCKLHSD 553 (602)
Q Consensus 485 ~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~----------~i~iw~~~~~ 553 (602)
.++|||||++|++++.++.|++||+.+++.......|...+.+++|+||| +|++++.++ .|++||+.++
T Consensus 383 ~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 383 AMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred eeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 99999999999999999999999999999888887899999999999999 888877654 8999999876
Q ss_pred CceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCe
Q psy12697 554 KPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGS 597 (602)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~ 597 (602)
+ +..+..+ ...+..++|+|||++|++++.++.
T Consensus 463 ~-~~~l~~~-----------~~~~~~~~~spdG~~l~~~s~~~~ 494 (1045)
T 1k32_A 463 K-IFAATTE-----------NSHDYAPAFDADSKNLYYLSYRSL 494 (1045)
T ss_dssp E-EEECSCS-----------SSBEEEEEECTTSCEEEEEESCCC
T ss_pred c-EEEeeCC-----------CcccCCceEcCCCCEEEEEecccC
Confidence 5 3333333 255788999999999999887654
No 126
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-31 Score=258.77 Aligned_cols=272 Identities=12% Similarity=0.099 Sum_probs=211.4
Q ss_pred EEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEE
Q psy12697 228 CAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIW 307 (602)
Q Consensus 228 ~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 307 (602)
..+.+++.+|++|+.||+|++||+.+++...... ...|.++.|+|+ +++++.|+.|++|
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~------------------~~~v~~~~~~~~---~~s~s~D~~i~~w 100 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT------------------TPNPRTGGEHPA---IISRGPCNRLLLL 100 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE------------------EECCCTTCCCCS---EEEECSTTEEEEE
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe------------------cCCceeeeeCCc---eEEecCCCeEEEE
Confidence 3455678899999999999999998776432111 145778888888 9999999999999
Q ss_pred cCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEee-eccCCeeeeeccC--CC-eEEEeeCC
Q psy12697 308 TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS-FHSAPALDVDWQS--NT-SFASCSTD 383 (602)
Q Consensus 308 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~--~~-~~~~~~~~ 383 (602)
+..+ .+.+||..+++.+..+. .+...+.++.|+| ++ .+++++.|
T Consensus 101 ~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~d 148 (343)
T 3lrv_A 101 YPGN--------------------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNR 148 (343)
T ss_dssp ETTT--------------------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETT
T ss_pred EccC--------------------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCC
Confidence 8764 46778888888666655 5667899999999 64 57889999
Q ss_pred CeEEEEEcCCCceeeEecc-CCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeee-EeeccccccEEEEEECCCCCCC
Q psy12697 384 QHIHVCKLHSDKPVKSFEG-HTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCV-HDLQAHNKEIYTIKWSPTGPET 461 (602)
Q Consensus 384 ~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~ 461 (602)
|.|++||+++++....... |...+.+++|+|++++|++|+.||.|++||+++++.+ ..+..
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~----------------- 211 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV----------------- 211 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC-----------------
T ss_pred CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec-----------------
Confidence 9999999999988766644 4558999999999999999999999999999987765 44433
Q ss_pred CCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc---cCCCee--EeeecCCc-e
Q psy12697 462 SNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF---HSAPAL--DVDWQSNT-S 535 (602)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~--~~~~s~~~-~ 535 (602)
+|..+|.+++|+|+|++|++++ |+.|++||+++++.+..+.. |...+. +++|+|++ +
T Consensus 212 ----------------~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 274 (343)
T 3lrv_A 212 ----------------DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN 274 (343)
T ss_dssp ----------------CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE
T ss_pred ----------------cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCE
Confidence 1566777888888999999999 55999999999887665553 444444 59999999 9
Q ss_pred EEEeeC-CCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECC---CCCeEEEeccCCeEEee
Q psy12697 536 FASCST-DQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNS---RGDKVGASASDGSVFKN 601 (602)
Q Consensus 536 l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~sp---dg~~l~~~~~dg~v~i~ 601 (602)
|++++. |+.|++|++......... .++..++|+| +++.|++++.||.+.+.
T Consensus 275 l~~~s~~d~~i~v~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 275 MIAYSNESNSLTIYKFDKKTKNWTK---------------DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp EEEEETTTTEEEEEEECTTTCSEEE---------------EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred EEEecCCCCcEEEEEEcccccceEe---------------cCceeEecCccccccceeEEEecCCceEEE
Confidence 999888 999999998665432221 3467788988 88899999999988764
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=6.5e-31 Score=240.14 Aligned_cols=280 Identities=13% Similarity=0.087 Sum_probs=198.9
Q ss_pred eEEEEEcCCCC---EEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCC
Q psy12697 225 VFICAWNPVKD---FLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYD 301 (602)
Q Consensus 225 v~~~~~~~~~~---~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 301 (602)
+.++.|-..+- .+++++. ..|++|+..+...- . ..+ ....+..+|..+.+.||..-|++..-.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~-----~--~~~------~~~~~~~~v~~~~~~~~~~~~~~~~~~ 107 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQW-----E--KLY------TWHFAEVPVLQIVPVPDVYNLVCVALG 107 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBE-----E--EEE------EEECCSSCEEEECCCTTCCSCEEEEEC
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccc-----e--eeE------EEeccCceeEEEEEcCcccceeeeeec
Confidence 55666655442 4555555 78999999876210 0 111 112346789999999986655543211
Q ss_pred CeEEEEcCCCcceeecccccCCeEEEEEccC----CCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeE
Q psy12697 302 GYARIWTSDGSLKSTLGQHKGPIFALKWNKR----GNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSF 377 (602)
Q Consensus 302 g~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (602)
.-+...|..++++|+ ++.+++++.+ +.+|++.++ .+
T Consensus 108 ----------------~~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g----------------------~l 147 (356)
T 2w18_A 108 ----------------NLEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKR----------------------RL 147 (356)
T ss_dssp ----------------SSSEEEEEEECC------CCEEEEEEEEE--EEEEEETTT----------------------EE
T ss_pred ----------------cccccceEEEEECCCccccccEEEeCCCe--EEEEecCCC----------------------cE
Confidence 124567999999999 9999998854 778876443 34
Q ss_pred EEee---CCCeEEEEEc-CCCceeeEeccCCCCeEEEEECC---CCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEE
Q psy12697 378 ASCS---TDQHIHVCKL-HSDKPVKSFEGHTNEVNAIKWDP---QGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIY 450 (602)
Q Consensus 378 ~~~~---~~~~i~i~d~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~ 450 (602)
+..+ .|+.|++|++ .+++.+..+.+|...++.++|+| ++.+|++++.|++|+|||++++++++++..|...
T Consensus 148 v~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~-- 225 (356)
T 2w18_A 148 VSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSY-- 225 (356)
T ss_dssp EEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC----
T ss_pred EEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcc--
Confidence 4443 4899999999 44788888889999999999999 7899999999999999999999999998764331
Q ss_pred EEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCE------------EEEEeCCCeEEEEeCCCCceeeee
Q psy12697 451 TIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNY------------ILSAGVDKTTIIWDAASGQCEQQF 518 (602)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~------------l~s~~~dg~i~iwd~~~~~~~~~~ 518 (602)
...+.+++|+|+|++ +++|+.|++|++||..+++.+..+
T Consensus 226 -----------------------------v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 226 -----------------------------QASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM 276 (356)
T ss_dssp ------------------------------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE
T ss_pred -----------------------------eeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE
Confidence 123344445555544 477899999999999999987665
Q ss_pred -----cccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEe
Q psy12697 519 -----SFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGAS 592 (602)
Q Consensus 519 -----~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~ 592 (602)
.+|...+.+..++ + .+++++.|++|+|||+.+++.+.++.+|.. ..+..++|||||++|++|
T Consensus 277 ~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~----------~vvs~vafSPDG~~LaSG 344 (356)
T 2w18_A 277 LYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSD----------QHWSFVKWSGTDSHLLAG 344 (356)
T ss_dssp EECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC------------CCCCEEEECSSSSEEEEE
T ss_pred EeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCC----------CeEEEEEECCCCCEEEEE
Confidence 3666665555554 5 899999999999999999999998887751 234468999999999999
Q ss_pred ccCCeEEee
Q psy12697 593 ASDGSVFKN 601 (602)
Q Consensus 593 ~~dg~v~i~ 601 (602)
+.|++|+|+
T Consensus 345 S~D~TIklW 353 (356)
T 2w18_A 345 QKDGNIFVY 353 (356)
T ss_dssp CTTSCEEEE
T ss_pred ECCCcEEEe
Confidence 999999985
No 128
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=100.00 E-value=3.3e-35 Score=202.74 Aligned_cols=87 Identities=79% Similarity=1.197 Sum_probs=69.4
Q ss_pred CcccccchhhhhhhhhhhcCceeeeeccccccCCccCCCCCCcCCchhHHHHHHhhceeEEEeeeeCCCCcc--cccccc
Q psy12697 1 MTYSSDEVNFLVYRYLQESGFQHSAYTFGIESHISQSNIDGALVPPAALLSIIQKGLQYTEAEISVGENGQE--QRPTES 78 (602)
Q Consensus 1 ~~~~s~e~n~li~ryL~e~g~~~~a~~~~~e~~~~~~~~~~~~~~~~~li~~~qk~l~~~~~e~~~~~~~~~--~~~~~~ 78 (602)
||||||||||||||||||+||.||||+|++|+++.+.+.+...||||+||++|||||+|.++|.++.+++.. .++.++
T Consensus 1 msitsdevN~LI~RYLqEsGf~hsAf~f~~Es~i~~~~~~~~~VppgaLVsllQKGL~Y~~~E~~~~~~g~~~~~~~~~~ 80 (90)
T 2xtc_A 1 MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIES 80 (90)
T ss_dssp -CCCHHHHHHHHHHHHHHTTCHHHHHHHHHHTTGGGSCCCGGGSCTTHHHHHHHHHHHHHHHHHHTTSSCCTTCC-----
T ss_pred CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhcCCccccccccCCcchHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999998774 456677
Q ss_pred ccccccchh
Q psy12697 79 LSLIDAVLP 87 (602)
Q Consensus 79 ~~~~~~~~~ 87 (602)
+++++++.|
T Consensus 81 ~~ll~~~~~ 89 (90)
T 2xtc_A 81 LSLIDAVMP 89 (90)
T ss_dssp ---------
T ss_pred hhhhhhccc
Confidence 887776544
No 129
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-31 Score=280.28 Aligned_cols=247 Identities=23% Similarity=0.397 Sum_probs=210.7
Q ss_pred cCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC---CcceeecccccCCeEEEEEccC--CCEEEEEecCCcEEEEeCC
Q psy12697 277 VPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD---GSLKSTLGQHKGPIFALKWNKR--GNYILSAGVDKTTIIWDAA 351 (602)
Q Consensus 277 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~---~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~~wd~~ 351 (602)
..|.+.|++++|+|++++|++|+.||.|++|+.. +.....+.+|...|.+++|+|+ +++|++++.||.|++||+.
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 3467899999999999999999999999999975 3456678899999999999988 9999999999999999999
Q ss_pred CCc--eeEEeeeccCCeeeeeccCC---CeEEEeeCCCeEEEEEcCCC--ceeeEeccCCCCeEEEEECC----------
Q psy12697 352 SGQ--CEQQFSFHSAPALDVDWQSN---TSFASCSTDQHIHVCKLHSD--KPVKSFEGHTNEVNAIKWDP---------- 414 (602)
Q Consensus 352 ~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~---------- 414 (602)
+++ ....+..|...+.++.|+|+ ..+++++.||.|++||+.++ .....+.+|...|.+++|+|
T Consensus 86 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 165 (753)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--------
T ss_pred CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccc
Confidence 987 66777889999999999996 57999999999999999887 34556778999999999999
Q ss_pred ---CCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccC
Q psy12697 415 ---QGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKR 491 (602)
Q Consensus 415 ---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~ 491 (602)
++.+|++|+.||.|++||++++..... ....+.+|..+|.+++|+|+
T Consensus 166 ~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~------------------------------~~~~~~~h~~~V~~l~~sp~ 215 (753)
T 3jro_A 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYV------------------------------LESTLEGHSDWVRDVAWSPT 215 (753)
T ss_dssp -CGGGCCEEEEETTSCEEEEEEETTTTEEE------------------------------EEEEECCCSSCEEEEEECCC
T ss_pred cCCCCCEEEEEECCCeEEEEeccCCcccce------------------------------eeeeecCCCCcEEEEEeccC
Confidence 589999999999999999987532111 11123346777888888888
Q ss_pred ---CCEEEEEeCCCeEEEEeCCCCc-----eeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCC
Q psy12697 492 ---GNYILSAGVDKTTIIWDAASGQ-----CEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSD 553 (602)
Q Consensus 492 ---~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~ 553 (602)
+++|++++.||.|++||+.+++ .......|...|++++|+|++ .+++++.||.|++|++.++
T Consensus 216 ~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 216 VLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred CCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 8999999999999999999874 334445688899999999999 9999999999999999854
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=6.5e-29 Score=251.78 Aligned_cols=323 Identities=11% Similarity=0.135 Sum_probs=246.0
Q ss_pred EECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcceE
Q psy12697 147 AFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVF 226 (602)
Q Consensus 147 ~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~ 226 (602)
+|+|++.++++++.|++|.+||..+++++..+.. ++. +.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~---------------------------------------g~~--~~ 182 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT---------------------------------------GYA--VH 182 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC---------------------------------------STT--EE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEec---------------------------------------Ccc--cc
Confidence 4899999999999999999999999998865531 233 78
Q ss_pred EEEEcCCCCEEEEeeCCCcEEEEeC--CCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC----CCCeEEEEeC
Q psy12697 227 ICAWNPVKDFLASGSGDSTARIWDM--TDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN----NGSFLATGSY 300 (602)
Q Consensus 227 ~~~~~~~~~~l~s~~~dg~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~l~~~~~ 300 (602)
.++|+|++++|++++.|++|++||+ .+++.. . . .+....+..++|+| +|+++++++.
T Consensus 183 ~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~-----~-~-----------i~~g~~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 183 ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV-----A-E-----------IKIGIEARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTSSSCEEE-----E-E-----------EECCSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred eEEECCCCCEEEEECCCCeEEEEECcCCCCcEE-----E-E-----------EecCCCcceEEeCCCcCCCCCEEEEEEc
Confidence 8999999999999999999999999 443211 0 0 11245689999999 9999999885
Q ss_pred -CCeEEEEcCC-Ccceeeccc----------cc-CCeEEEEEccCCCEE-EEEecCCcEEEEeCCCCceeE--EeeeccC
Q psy12697 301 -DGYARIWTSD-GSLKSTLGQ----------HK-GPIFALKWNKRGNYI-LSAGVDKTTIIWDAASGQCEQ--QFSFHSA 364 (602)
Q Consensus 301 -dg~i~i~~~~-~~~~~~~~~----------~~-~~i~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~--~~~~~~~ 364 (602)
++.|.+||.. ++.+..+.. |. ..+..+.++|++..+ ++...++.|.+||..+.+.+. .+. +..
T Consensus 246 ~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~ 324 (543)
T 1nir_A 246 WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAP 324 (543)
T ss_dssp ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCS
T ss_pred cCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCc
Confidence 8999999976 445554443 22 378899999977654 566678999999998876544 332 455
Q ss_pred CeeeeeccCCCe-EEE-eeCCCeEEEEEcCCCceeeEecc----CCCCeEEEEECCC-CCEEEEEE-CCCeEEEEeCCC-
Q psy12697 365 PALDVDWQSNTS-FAS-CSTDQHIHVCKLHSDKPVKSFEG----HTNEVNAIKWDPQ-GLLLASCS-DDMTLKIWSLDK- 435 (602)
Q Consensus 365 ~~~~~~~~~~~~-~~~-~~~~~~i~i~d~~~~~~~~~~~~----~~~~i~~~~~~~~-~~~l~~~~-~dg~i~iwd~~~- 435 (602)
.+..+.|+|++. +++ +..++.|.+||..+++.+..+.. |.+....+ ++|+ +..++++. .|++|.+||+.+
T Consensus 325 ~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~ 403 (543)
T 1nir_A 325 FLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPK 403 (543)
T ss_dssp SCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred CccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCC
Confidence 678899999876 444 44589999999999998887764 55444343 4776 66677765 589999999987
Q ss_pred ------CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe-------CCC
Q psy12697 436 ------DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG-------VDK 502 (602)
Q Consensus 436 ------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-------~dg 502 (602)
.++++++..+ ...+..++++|+|++|++++ .++
T Consensus 404 ~~~~~~~~~v~~l~~~----------------------------------g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~ 449 (543)
T 1nir_A 404 NHPQYAWKKVAELQGQ----------------------------------GGGSLFIKTHPKSSHLYVDTTFNPDARISQ 449 (543)
T ss_dssp TCTTTBTSEEEEEECS----------------------------------CSCCCCEECCTTCCEEEECCTTCSSHHHHT
T ss_pred CCchhcCeEEEEEEcC----------------------------------CCCceEEEcCCCCCcEEEecCCCCCcccCc
Confidence 5666665543 34556677888999999987 377
Q ss_pred eEEEEeCCCCcee-eee--------cccCCCeeEeeecCCc-eEEEe-----eCCCcEEEeecCCCCceeeeeccc
Q psy12697 503 TTIIWDAASGQCE-QQF--------SFHSAPALDVDWQSNT-SFASC-----STDQHIHVCKLHSDKPVKSFEGHT 563 (602)
Q Consensus 503 ~i~iwd~~~~~~~-~~~--------~~~~~~v~~~~~s~~~-~l~~~-----~~d~~i~iw~~~~~~~~~~~~~~~ 563 (602)
+|.+||+.+++.. ..+ ..+...+..+.|+|+| .++++ +.|+.|.|||..+++++.+++...
T Consensus 450 ~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~ 525 (543)
T 1nir_A 450 SVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR 525 (543)
T ss_dssp CEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred eEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCCC
Confidence 9999999999877 443 3456789999999999 55544 247999999999998888777543
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=2.5e-28 Score=247.52 Aligned_cols=330 Identities=12% Similarity=0.097 Sum_probs=244.2
Q ss_pred eccceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEec--CCceeEEEeeccCceEEEEeCCCCCC
Q psy12697 118 HRLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSA--RTGQLVHSYKGTGGIFEVCWNSRGTP 195 (602)
Q Consensus 118 ~~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (602)
.+++|.+||..+++++.++..+.. +.+++|+|||++|++++.|++|.+||+ .+++.+..++
T Consensus 157 ~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~---------------- 219 (543)
T 1nir_A 157 DAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK---------------- 219 (543)
T ss_dssp GGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE----------------
T ss_pred CCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe----------------
Confidence 357999999999999999984433 899999999999999999999999999 8888775543
Q ss_pred CCCCCCccccccccccCCcceEeeCCCcceEEEEEcC----CCCEEEEeeC-CCcEEEEeCCCCCCCCCccceEEEEEEe
Q psy12697 196 PNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNP----VKDFLASGSG-DSTARIWDMTDSTKKDPKELQIVLRHCI 270 (602)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~----~~~~l~s~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 270 (602)
+...+..++|+| +++++++++. +++|.+||..+.+........ ..
T Consensus 220 -------------------------~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~-----g~ 269 (543)
T 1nir_A 220 -------------------------IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTR-----GM 269 (543)
T ss_dssp -------------------------CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECC-----EE
T ss_pred -------------------------cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeeccc-----Cc
Confidence 344578999999 9999999885 899999998876543211110 00
Q ss_pred cCCCcccCCCCceeEEeeCCCCCe-EEEEeCCCeEEEEcCCC-ccee-ecccccCCeEEEEEccCCCEEEEEe-cCCcEE
Q psy12697 271 SKGGTEVPSNKDVTSLDWNNNGSF-LATGSYDGYARIWTSDG-SLKS-TLGQHKGPIFALKWNKRGNYILSAG-VDKTTI 346 (602)
Q Consensus 271 ~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~i~~~~~-~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~ 346 (602)
............+.++.++|++.. +++...++.|.+||... .... ....+...+.++.|+|+++++++++ .+++|.
T Consensus 270 ~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~ 349 (543)
T 1nir_A 270 TVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVA 349 (543)
T ss_dssp CSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEE
T ss_pred ccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEE
Confidence 000000112347899999997665 55667789999999763 2221 1223566788999999999877655 588999
Q ss_pred EEeCCCCceeEEeee----ccCCeeeeeccCC-CeE-EEee-CCCeEEEEEcCC-------CceeeEeccCCCCeEEEEE
Q psy12697 347 IWDAASGQCEQQFSF----HSAPALDVDWQSN-TSF-ASCS-TDQHIHVCKLHS-------DKPVKSFEGHTNEVNAIKW 412 (602)
Q Consensus 347 ~wd~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~-~~~~-~~~~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~ 412 (602)
+||+.++++...+.. |......+ ++|+ +.+ +++. .+++|.+||+.+ .+.+.++.+|...+..+++
T Consensus 350 v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~ 428 (543)
T 1nir_A 350 VIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKT 428 (543)
T ss_dssp EEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEEC
T ss_pred EEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEc
Confidence 999999999888765 32222232 3454 544 4443 579999999998 8899999999988999999
Q ss_pred CCCCCEEEEEE-------CCCeEEEEeCCCCeee-EeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeE
Q psy12697 413 DPQGLLLASCS-------DDMTLKIWSLDKDNCV-HDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIF 484 (602)
Q Consensus 413 ~~~~~~l~~~~-------~dg~i~iwd~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 484 (602)
+|++++|++++ .+++|.+||+.+++.. ..+.... ...+..+...+.
T Consensus 429 ~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~--------------------------~~~~~~~~~~~~ 482 (543)
T 1nir_A 429 HPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAE--------------------------WADLGEGAKRVV 482 (543)
T ss_dssp CTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHH--------------------------HHCCCSSCCEEE
T ss_pred CCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechh--------------------------hcccCCCCCceE
Confidence 99999999987 2679999999988755 2221000 001123456778
Q ss_pred EEEEccCCCEEEEEe-----CCCeEEEEeCCCCceeeeeccc
Q psy12697 485 ALKWNKRGNYILSAG-----VDKTTIIWDAASGQCEQQFSFH 521 (602)
Q Consensus 485 ~i~~s~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~ 521 (602)
.+.|+|+|++++.+. .|+.|.|||..+++++.+++.+
T Consensus 483 ~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~ 524 (543)
T 1nir_A 483 QPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDP 524 (543)
T ss_dssp EEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred eccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCC
Confidence 888899999888663 4799999999999999888753
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=2.4e-28 Score=240.58 Aligned_cols=302 Identities=14% Similarity=0.127 Sum_probs=226.0
Q ss_pred CCcceEEEEEcCCC-CEEEEee----CCC----cEEEEeC--CCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeC
Q psy12697 221 HESEVFICAWNPVK-DFLASGS----GDS----TARIWDM--TDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWN 289 (602)
Q Consensus 221 h~~~v~~~~~~~~~-~~l~s~~----~dg----~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 289 (602)
+...+....|.+.+ .++++|+ .|| .+++||+ .+++.... ... ..+...+..++++
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~---~~~-----------~~~~~~~~~~~~~ 126 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ---NSY-----------KVNKQWLRYAGHT 126 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEE---EEE-----------EECGGGHHHHHHH
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEee---eEE-----------EcChhHHHHHHHH
Confidence 34567778898888 5666775 467 8999999 76653210 001 1123345555554
Q ss_pred C--------------CCCeEEEEeCC------CeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCC---cEE
Q psy12697 290 N--------------NGSFLATGSYD------GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDK---TTI 346 (602)
Q Consensus 290 ~--------------~~~~l~~~~~d------g~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~ 346 (602)
+ .+..++.++.+ +.|++||.++.....+..|...+.+++|+|+|++|++++.++ .|+
T Consensus 127 ~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~ 206 (415)
T 2hqs_A 127 ASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALV 206 (415)
T ss_dssp HHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred HHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEE
Confidence 3 25566666654 799999999888888888999999999999999999999875 999
Q ss_pred EEeCCCCceeEEeeeccCCeeeeeccCCCe-EE-EeeCCC--eEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEE
Q psy12697 347 IWDAASGQCEQQFSFHSAPALDVDWQSNTS-FA-SCSTDQ--HIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASC 422 (602)
Q Consensus 347 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 422 (602)
+||+.+++.. .+..+...+.+++|+|++. ++ +++.++ .|++||+.+++. ..+..|...+.+++|+|+|++|+++
T Consensus 207 ~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~ 284 (415)
T 2hqs_A 207 IQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFT 284 (415)
T ss_dssp EEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEE
T ss_pred EEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEE
Confidence 9999998875 4556677899999999976 44 455554 499999998775 5677788899999999999999988
Q ss_pred ECC-C--eEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe
Q psy12697 423 SDD-M--TLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG 499 (602)
Q Consensus 423 ~~d-g--~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~ 499 (602)
+.+ + .|.+||+.+++.. .+.. +...+.+++|+|||++|++++
T Consensus 285 s~~~g~~~i~~~d~~~~~~~-~l~~----------------------------------~~~~~~~~~~spdG~~l~~~~ 329 (415)
T 2hqs_A 285 SDQAGRPQVYKVNINGGAPQ-RITW----------------------------------EGSQNQDADVSSDGKFMVMVS 329 (415)
T ss_dssp ECTTSSCEEEEEETTSSCCE-ECCC----------------------------------SSSEEEEEEECTTSSEEEEEE
T ss_pred ECCCCCcEEEEEECCCCCEE-EEec----------------------------------CCCcccCeEECCCCCEEEEEE
Confidence 864 4 6788888776532 2222 334566778888999999887
Q ss_pred CC---CeEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCC---cEEEeecCCCCceeeeecccccceEEEEe
Q psy12697 500 VD---KTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQ---HIHVCKLHSDKPVKSFEGHTTGQLVHSYK 572 (602)
Q Consensus 500 ~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 572 (602)
.+ ..|++||+.+++.. .+..+. .+.+++|+||| .|++++.++ .|++||+. ++....+..+.
T Consensus 330 ~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~--------- 397 (415)
T 2hqs_A 330 SNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATD--------- 397 (415)
T ss_dssp ECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSS---------
T ss_pred CcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCC---------
Confidence 64 68999999988874 455454 89999999999 888888777 79999986 44444554443
Q ss_pred cCCcEEEEEECCCCC
Q psy12697 573 GTGGIFEVCWNSRGD 587 (602)
Q Consensus 573 ~~~~i~~l~~spdg~ 587 (602)
+.|.+++|+|.-.
T Consensus 398 --~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 398 --GQVKFPAWSPYLH 410 (415)
T ss_dssp --SEEEEEEECCCCC
T ss_pred --CCCcCCccccccc
Confidence 7799999999754
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=4.7e-28 Score=238.42 Aligned_cols=300 Identities=13% Similarity=0.142 Sum_probs=227.2
Q ss_pred CceEEEEECCCCC-eEEEee----CCc----eEEEEec--CCceeEEEeeccCceEEEEeCCCCCCCCCCCCcccccccc
Q psy12697 141 EPVYSVAFSPDGK-FLASGS----FDK----CVHIWSA--RTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIE 209 (602)
Q Consensus 141 ~~V~~~~~s~d~~-~l~s~~----~d~----~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (602)
..+...+|++.|. ++++|+ .|| +|+|||+ .+++.+..
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~-------------------------------- 110 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ-------------------------------- 110 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEE--------------------------------
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEee--------------------------------
Confidence 4566677877765 666776 467 9999999 89887633
Q ss_pred ccCCcceEeeCCCcceEEEEEcC--------------CCCEEEEeeCC------CcEEEEeCCCCCCCCCccceEEEEEE
Q psy12697 210 IPQSKATKLIGHESEVFICAWNP--------------VKDFLASGSGD------STARIWDMTDSTKKDPKELQIVLRHC 269 (602)
Q Consensus 210 ~~~~~~~~l~~h~~~v~~~~~~~--------------~~~~l~s~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~ 269 (602)
..+.+|...+..+++++ .+..++.++.+ +.|++||++.... ..+..
T Consensus 111 ------~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~------~~l~~-- 176 (415)
T 2hqs_A 111 ------NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ------FVVHR-- 176 (415)
T ss_dssp ------EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSC------EEEEE--
T ss_pred ------eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCC------EEEeC--
Confidence 22445555555555543 25566666554 7999999974321 22222
Q ss_pred ecCCCcccCCCCceeEEeeCCCCCeEEEEeCCC---eEEEEcCCCcceeecccccCCeEEEEEccCCCEEE-EEecCCc-
Q psy12697 270 ISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDG---YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYIL-SAGVDKT- 344 (602)
Q Consensus 270 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~- 344 (602)
+...+.+++|+|+|+.|++++.++ .|++||+.+.....+..|...+.+++|+|+|++|+ +++.++.
T Consensus 177 ---------~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~ 247 (415)
T 2hqs_A 177 ---------SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSL 247 (415)
T ss_dssp ---------ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred ---------CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCc
Confidence 257899999999999999999875 99999998666667777888999999999999888 6665554
Q ss_pred -EEEEeCCCCceeEEeeeccCCeeeeeccCCCe-EEEeeC-CC--eEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEE
Q psy12697 345 -TIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-FASCST-DQ--HIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLL 419 (602)
Q Consensus 345 -i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 419 (602)
|.+||+.+++. ..+..+...+..+.|+|++. +++++. ++ .|++||+.+++. ..+..+...+.+++|+|+|++|
T Consensus 248 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l 325 (415)
T 2hqs_A 248 NLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFM 325 (415)
T ss_dssp EEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEE
T ss_pred eEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEE
Confidence 99999998876 45666778899999999976 565654 34 688889988764 4455677789999999999999
Q ss_pred EEEECC---CeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEE
Q psy12697 420 ASCSDD---MTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYIL 496 (602)
Q Consensus 420 ~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~ 496 (602)
++++.+ ..|++||+.+++.. .+.. +. .+.+++|+|||++|+
T Consensus 326 ~~~~~~~g~~~i~~~d~~~~~~~-~l~~----------------------------------~~-~~~~~~~spdg~~l~ 369 (415)
T 2hqs_A 326 VMVSSNGGQQHIAKQDLATGGVQ-VLSS----------------------------------TF-LDETPSLAPNGTMVI 369 (415)
T ss_dssp EEEEECSSCEEEEEEETTTCCEE-ECCC----------------------------------SS-SCEEEEECTTSSEEE
T ss_pred EEEECcCCceEEEEEECCCCCEE-EecC----------------------------------CC-CcCCeEEcCCCCEEE
Confidence 988864 58999999887653 2222 22 567788888999999
Q ss_pred EEeCCC---eEEEEeCCCCceeeeecccCCCeeEeeecCCc
Q psy12697 497 SAGVDK---TTIIWDAASGQCEQQFSFHSAPALDVDWQSNT 534 (602)
Q Consensus 497 s~~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~ 534 (602)
+++.++ .|++||+. +.....+..|.+.|.+++|+|..
T Consensus 370 ~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 370 YSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp EEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCC
T ss_pred EEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccc
Confidence 888877 89999987 66677888899999999999965
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=4.3e-28 Score=258.36 Aligned_cols=348 Identities=10% Similarity=0.088 Sum_probs=235.9
Q ss_pred ceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCC
Q psy12697 142 PVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGH 221 (602)
Q Consensus 142 ~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h 221 (602)
.+.+++|+|||+++++ +.||+|++||+.+++....+ .+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~----------------------------------------~~~ 56 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLI----------------------------------------EGK 56 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEE----------------------------------------CTT
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEe----------------------------------------ccc
Confidence 3567899999998876 78999999999998875433 233
Q ss_pred Cc---ceEEEEEcCCCCEEEEeeCC---------CcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeC
Q psy12697 222 ES---EVFICAWNPVKDFLASGSGD---------STARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWN 289 (602)
Q Consensus 222 ~~---~v~~~~~~~~~~~l~s~~~d---------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 289 (602)
.. .|.+++|+|||++|++++.+ +.+.+||+.+++... +. ....+...+..++|+
T Consensus 57 ~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~---l~-----------~~~~~~~~~~~~~~S 122 (723)
T 1xfd_A 57 KIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQS---LD-----------PPEVSNAKLQYAGWG 122 (723)
T ss_dssp TTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEE---CC-----------CTTCCSCCCSBCCBC
T ss_pred cccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEe---cc-----------CCccccccccccEEC
Confidence 33 48899999999999999775 778899998875410 00 001123458899999
Q ss_pred CCCCeEEEEeCCCeEEEEcCCCc-ceeecccccCC------------------eEEEEEccCCCEEEEEecC-CcEEEEe
Q psy12697 290 NNGSFLATGSYDGYARIWTSDGS-LKSTLGQHKGP------------------IFALKWNKRGNYILSAGVD-KTTIIWD 349 (602)
Q Consensus 290 ~~~~~l~~~~~dg~i~i~~~~~~-~~~~~~~~~~~------------------i~~~~~~~~~~~l~~~~~d-g~i~~wd 349 (602)
|||+.|+.++. +.|++|+..+. .......+... +.+++|+|||++|++++.+ +.+.+|+
T Consensus 123 PdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~ 201 (723)
T 1xfd_A 123 PKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIME 201 (723)
T ss_dssp SSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEE
T ss_pred CCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEE
Confidence 99999999886 78999998754 33333333333 3789999999999988755 4677777
Q ss_pred CCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccC------CCCeEEEEECCCCCEEEEEE
Q psy12697 350 AASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGH------TNEVNAIKWDPQGLLLASCS 423 (602)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~ 423 (602)
+...... ....+..+.|.+++.. ..+..|++||+.+++....+..+ ...+..++|+|||++|++.+
T Consensus 202 ~~~~~~~-----~~~~~~~~~~~~~G~~---~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~ 273 (723)
T 1xfd_A 202 LPTYTGS-----IYPTVKPYHYPKAGSE---NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWL 273 (723)
T ss_dssp ECCCSSS-----SSCCCEEEECCBTTSC---CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEE
T ss_pred eeccCCc-----CCCcceeccCCCCCCC---CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEE
Confidence 5432211 1223455666554431 23458999999988865666654 56789999999999987765
Q ss_pred C----CCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCe----EEEEEccCCCEE
Q psy12697 424 D----DMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPI----FALKWNKRGNYI 495 (602)
Q Consensus 424 ~----dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~i~~s~~~~~l 495 (602)
. +..|++||+.+++....+..+. ...+ ..++|||||++|
T Consensus 274 ~~~~~~~~i~~~d~~~g~~~~~~~~~~---------------------------------~~~~~~~~~~~~~spdg~~l 320 (723)
T 1xfd_A 274 NRAQNVSILTLCDATTGVCTKKHEDES---------------------------------EAWLHRQNEEPVFSKDGRKF 320 (723)
T ss_dssp ETTSCEEEEEEEETTTCCEEEEEEEEC---------------------------------SSCCCCCCCCCEECTTSCSE
T ss_pred cCCCCeEEEEEEeCCCCcceEEEEecc---------------------------------CCEEeccCCCceEcCCCCeE
Confidence 3 3579999999887655443211 1111 256888999977
Q ss_pred EE--EeCCC------eEEEEe-CCCCc--eeeeecccCCCeeE-eeecCCc-eEEEeeCC---CcEEEeecCCCC--cee
Q psy12697 496 LS--AGVDK------TTIIWD-AASGQ--CEQQFSFHSAPALD-VDWQSNT-SFASCSTD---QHIHVCKLHSDK--PVK 557 (602)
Q Consensus 496 ~s--~~~dg------~i~iwd-~~~~~--~~~~~~~~~~~v~~-~~~s~~~-~l~~~~~d---~~i~iw~~~~~~--~~~ 557 (602)
+. +..++ .|++|| ..+++ +...+..+...+.. ++|+||| .|+..+.+ +.+++|++.... ...
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 400 (723)
T 1xfd_A 321 FFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQ 400 (723)
T ss_dssp EEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCB
T ss_pred EEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcc
Confidence 75 45566 577888 44444 14555544444554 6999999 77665554 789999986432 222
Q ss_pred eeecccccceEEEEecCCcEEEEEECCCCCeEEEecc
Q psy12697 558 SFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASAS 594 (602)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~ 594 (602)
.+... +.....+..++|+|||++|+....
T Consensus 401 ~l~~~--------~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 401 CLSCD--------LVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp CSSTT--------SSSSCCCCEEEECTTSSEEEEECC
T ss_pred eeccc--------ccCCCCeEEEEECCCCCEEEEEcc
Confidence 22210 001245788999999998887544
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=4.2e-27 Score=251.36 Aligned_cols=342 Identities=12% Similarity=0.142 Sum_probs=236.9
Q ss_pred CCceEEEEECCCCCeEEEeeC-Cc-----eEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCC
Q psy12697 140 TEPVYSVAFSPDGKFLASGSF-DK-----CVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQS 213 (602)
Q Consensus 140 ~~~V~~~~~s~d~~~l~s~~~-d~-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (602)
...|.+++|||||++|++++. |+ .|.+||+.+++....+...... +++..+..... ...
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~------~~~~~~~~~~~---------~~~ 100 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVL------PGTETLSDEEK---------ARR 100 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC-----------------------------
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcc------cccccccchhh---------hhh
Confidence 456899999999999999998 88 9999999999876655432111 11111000000 000
Q ss_pred cceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCC---CCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC
Q psy12697 214 KATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDS---TKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN 290 (602)
Q Consensus 214 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 290 (602)
....+ .....|.+++|+|||++|++++. +.|.+||+.++ .... ...+...+.+++|+|
T Consensus 101 ~~~~~-~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~-----------------l~~~~~~~~~~~~SP 161 (741)
T 2ecf_A 101 ERQRI-AAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQ-----------------LTHGEGFATDAKLSP 161 (741)
T ss_dssp -------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCB-----------------CCCSSSCEEEEEECT
T ss_pred hhhhh-ccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEE-----------------cccCCcccccccCCC
Confidence 00000 01245788999999999999887 99999999877 3211 112246799999999
Q ss_pred CCCeEEEEeCCCeEEEEcCCCcceeecc-cccCC----------------eEEEEEccCCCEEEEEecCC----------
Q psy12697 291 NGSFLATGSYDGYARIWTSDGSLKSTLG-QHKGP----------------IFALKWNKRGNYILSAGVDK---------- 343 (602)
Q Consensus 291 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~-~~~~~----------------i~~~~~~~~~~~l~~~~~dg---------- 343 (602)
||++|++++ ++.|++||+.+.....+. .+... +..+.|+|||++|++++.|+
T Consensus 162 DG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~ 240 (741)
T 2ecf_A 162 KGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYE 240 (741)
T ss_dssp TSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEE
T ss_pred CCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCC
Confidence 999999887 468999998765444333 23222 47899999999999988765
Q ss_pred -----------------------cEEEEeCCC-CceeEEee--eccCCeeeeeccCCCe-EEEee-----CCCeEEEEEc
Q psy12697 344 -----------------------TTIIWDAAS-GQCEQQFS--FHSAPALDVDWQSNTS-FASCS-----TDQHIHVCKL 391 (602)
Q Consensus 344 -----------------------~i~~wd~~~-~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~-----~~~~i~i~d~ 391 (602)
.|.+||+.+ ++...... .+...+..+.| |++. ++++. .+..|++||+
T Consensus 241 ~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~ 319 (741)
T 2ecf_A 241 VYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTL 319 (741)
T ss_dssp ECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEET
T ss_pred CCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEEC
Confidence 789999988 77654432 25567889999 8865 44433 2568999999
Q ss_pred CCCceeeEeccCCC----CeEEEEECCCCCEEEEEECCCeEEEEeCC-CCeeeEeeccccccEEEEEECCCCCCCCCCCc
Q psy12697 392 HSDKPVKSFEGHTN----EVNAIKWDPQGLLLASCSDDMTLKIWSLD-KDNCVHDLQAHNKEIYTIKWSPTGPETSNPNM 466 (602)
Q Consensus 392 ~~~~~~~~~~~~~~----~i~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 466 (602)
.+++....+..+.. .+..++|+|||+++++++.||.++||.++ ++. ...+..
T Consensus 320 ~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~---------------------- 376 (741)
T 2ecf_A 320 ASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTH---------------------- 376 (741)
T ss_dssp TTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCC----------------------
T ss_pred CCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeee----------------------
Confidence 99987777665553 45689999999999999999988888765 233 443333
Q ss_pred ceeeeeeeccCCccCCeEEE-EEccCCCEEEE-EeCCC--eEEEEeCCC-CceeeeecccCCCeeEeeecCCc-eEEEee
Q psy12697 467 SLIFILKSTLGQHKGPIFAL-KWNKRGNYILS-AGVDK--TTIIWDAAS-GQCEQQFSFHSAPALDVDWQSNT-SFASCS 540 (602)
Q Consensus 467 ~~~~~~~~~~~~~~~~v~~i-~~s~~~~~l~s-~~~dg--~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~ 540 (602)
+...+..+ .|+|+|+.|+. ++.++ .+++|++.. +.....+.. ...+..++|+||+ .|+...
T Consensus 377 ------------~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~ 443 (741)
T 2ecf_A 377 ------------GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSW 443 (741)
T ss_dssp ------------SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEE
T ss_pred ------------cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEe
Confidence 34455555 48888887764 44455 899999864 555666665 6678899999999 666544
Q ss_pred CC----CcEEEeecCCC
Q psy12697 541 TD----QHIHVCKLHSD 553 (602)
Q Consensus 541 ~d----~~i~iw~~~~~ 553 (602)
.+ ..+.+|+...+
T Consensus 444 ~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 444 SNNSTPPQIELFRANGE 460 (741)
T ss_dssp EETTEEEEEEEEETTSC
T ss_pred cCCCCCCeEEEEEcCCC
Confidence 33 46888987543
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=3e-27 Score=252.52 Aligned_cols=328 Identities=11% Similarity=0.102 Sum_probs=234.0
Q ss_pred CcceEEEEEcCCCCEEEEeeC-CC-----cEEEEeCCCCCCCCCccceEEE--EEEecCCC------cccCCCCceeEEe
Q psy12697 222 ESEVFICAWNPVKDFLASGSG-DS-----TARIWDMTDSTKKDPKELQIVL--RHCISKGG------TEVPSNKDVTSLD 287 (602)
Q Consensus 222 ~~~v~~~~~~~~~~~l~s~~~-dg-----~i~iw~~~~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~i~~~~ 287 (602)
...+..++|+|||++|++++. |+ .|++||+.+++........... ...+.... ........+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999998 88 8999999887532111000000 00000000 0000013478999
Q ss_pred eCCCCCeEEEEeCCCeEEEEcCCCc---ceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccC
Q psy12697 288 WNNNGSFLATGSYDGYARIWTSDGS---LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA 364 (602)
Q Consensus 288 ~~~~~~~l~~~~~dg~i~i~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~ 364 (602)
|+|||++|++++. +.|.+||+.+. ....+..|...+..++|+|||++|+.++ ++.|.+||+.+++.......+..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcc
Confidence 9999999999887 99999999876 6677778888999999999999999887 56899999998876654443332
Q ss_pred C----------------eeeeeccCCCe-EEEeeCCC---------------------------------eEEEEEcCC-
Q psy12697 365 P----------------ALDVDWQSNTS-FASCSTDQ---------------------------------HIHVCKLHS- 393 (602)
Q Consensus 365 ~----------------~~~~~~~~~~~-~~~~~~~~---------------------------------~i~i~d~~~- 393 (602)
. +..+.|+|++. +++++.++ .|++||+.+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 2 47789999975 66665554 788999988
Q ss_pred CceeeEec--cCCCCeEEEEECCCCCEEEEEEC-----CCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCc
Q psy12697 394 DKPVKSFE--GHTNEVNAIKWDPQGLLLASCSD-----DMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNM 466 (602)
Q Consensus 394 ~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 466 (602)
++...... .|...+..++| |||++|++++. +..|++||+.+++....+..+...
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~------------------ 334 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPT------------------ 334 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSS------------------
T ss_pred CceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCC------------------
Confidence 77554433 46778999999 99999997764 568999999988765544332110
Q ss_pred ceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCC-CCceeeeecccCCCeeEe-eecCCc-eEE-EeeCC
Q psy12697 467 SLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA-SGQCEQQFSFHSAPALDV-DWQSNT-SFA-SCSTD 542 (602)
Q Consensus 467 ~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~-~~s~~~-~l~-~~~~d 542 (602)
....+..++|+|||+++++++.||.+.||.+. ++. ...+..|...+..+ .|+||+ .|+ +++.+
T Consensus 335 ------------~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~ 401 (741)
T 2ecf_A 335 ------------WVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIE 401 (741)
T ss_dssp ------------CCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSS
T ss_pred ------------cCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCC
Confidence 01134567899999999999999977777664 345 77777788888887 599999 665 45555
Q ss_pred C--cEEEeecCC-CCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccC
Q psy12697 543 Q--HIHVCKLHS-DKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASD 595 (602)
Q Consensus 543 ~--~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~d 595 (602)
+ .++||++.. +.....+. ....+..++|||||++|+....+
T Consensus 402 ~~~~~~l~~~~~~g~~~~~l~------------~~~~~~~~~~spdg~~l~~~~~~ 445 (741)
T 2ecf_A 402 SARESQIYAVPLQGGQPQRLS------------KAPGMHSASFARNASVYVDSWSN 445 (741)
T ss_dssp CTTCBEEEEEETTCCCCEECC------------CSCSEEEEEECTTSSEEEEEEEE
T ss_pred CCceEEEEEEEcCCCCeeecc------------cCCCceEEEECCCCCEEEEEecC
Confidence 5 899999854 33333332 23568899999999998876543
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=2.2e-25 Score=236.70 Aligned_cols=344 Identities=13% Similarity=0.099 Sum_probs=224.2
Q ss_pred eeeeecccceee-eeeeccC-----------------CceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCc
Q psy12697 122 LPLWDVERGECL-NTLTRHT-----------------EPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGG 183 (602)
Q Consensus 122 i~vwd~~~~~~~-~~l~~h~-----------------~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 183 (602)
| +||+.+++.+ ..+..|. ..|.+++|||| +.++.+ .++.|.+||+.+++...
T Consensus 46 i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~------- 115 (706)
T 2z3z_A 46 L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTY------- 115 (706)
T ss_dssp E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEE-------
T ss_pred E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEE-------
Confidence 8 9999999884 5555544 56999999999 555554 45999999999887543
Q ss_pred eEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCC-----CCCCC
Q psy12697 184 IFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTD-----STKKD 258 (602)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~-----~~~~~ 258 (602)
+..+...+..++|+|||+.|+++ .++.|.+|++.+ ++...
T Consensus 116 ----------------------------------l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~ 160 (706)
T 2z3z_A 116 ----------------------------------LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIA 160 (706)
T ss_dssp ----------------------------------EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEE
T ss_pred ----------------------------------ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEE
Confidence 23355667788999999999985 679999999987 54321
Q ss_pred CccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEe---------------------------------CCCeEE
Q psy12697 259 PKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGS---------------------------------YDGYAR 305 (602)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---------------------------------~dg~i~ 305 (602)
........ ..........+...+.+++|+|||++|++++ .+..|.
T Consensus 161 ~~~~~~~~--~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 238 (706)
T 2z3z_A 161 VTIDGTET--LVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG 238 (706)
T ss_dssp SCSCCBTT--EEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred eccCCCCC--eEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence 10000000 0000000001123368999999999999987 446799
Q ss_pred EEcCCCcceeecc---cccCCeEEEEEccCCCEEEEEecCC-----cEEEEeCCCCceeEEee-ecc-C---Ceeeeecc
Q psy12697 306 IWTSDGSLKSTLG---QHKGPIFALKWNKRGNYILSAGVDK-----TTIIWDAASGQCEQQFS-FHS-A---PALDVDWQ 372 (602)
Q Consensus 306 i~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~~wd~~~~~~~~~~~-~~~-~---~~~~~~~~ 372 (602)
+||+.+.....+. .|...+.+++|+|||++|++++.++ .|.+||+.+++....+. ... . .+..+.|+
T Consensus 239 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~s 318 (706)
T 2z3z_A 239 IYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFL 318 (706)
T ss_dssp EEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEEC
T ss_pred EEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceee
Confidence 9998865443332 4667799999999999999988776 89999999984433332 222 1 24678999
Q ss_pred C--CCe-EEEeeCCCeEEEEEcC-CCceeeEeccCCCCeEE-EEECCCCCEEEEEECC-C----eEEEEeCCCCeeeEee
Q psy12697 373 S--NTS-FASCSTDQHIHVCKLH-SDKPVKSFEGHTNEVNA-IKWDPQGLLLASCSDD-M----TLKIWSLDKDNCVHDL 442 (602)
Q Consensus 373 ~--~~~-~~~~~~~~~i~i~d~~-~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~d-g----~i~iwd~~~~~~~~~~ 442 (602)
| ++. ++++..++.+.+|++. +++.+..+..+...+.. ++|+|+++.|+.++.+ + .|..||+.+++ ...+
T Consensus 319 p~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l 397 (706)
T 2z3z_A 319 PGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDL 397 (706)
T ss_dssp TTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEES
T ss_pred cCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceec
Confidence 8 876 4556678888888876 56777788888877877 7999999988766554 3 56677766544 2222
Q ss_pred ccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCC----CeEEEEeCCCCceeeee
Q psy12697 443 QAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVD----KTTIIWDAASGQCEQQF 518 (602)
Q Consensus 443 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~ 518 (602)
. +...+.+++|||||++++....+ +.|++||+.+++ ...+
T Consensus 398 ~-----------------------------------~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~-~~~~ 441 (706)
T 2z3z_A 398 T-----------------------------------PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS-HTLL 441 (706)
T ss_dssp C-----------------------------------CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE-EEEE
T ss_pred c-----------------------------------CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe-Eeec
Confidence 1 23456678888899988876443 569999999887 3333
Q ss_pred cccCCCeeEeeecCCceEEEeeCCC--cEEEeec
Q psy12697 519 SFHSAPALDVDWQSNTSFASCSTDQ--HIHVCKL 550 (602)
Q Consensus 519 ~~~~~~v~~~~~s~~~~l~~~~~d~--~i~iw~~ 550 (602)
.+..++....+.+...+-.-..|| .+..|-.
T Consensus 442 -~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 474 (706)
T 2z3z_A 442 -EAKNPDTGYAMPEIRTGTIMAADGQTPLYYKLT 474 (706)
T ss_dssp -ECC------CCCCEEEEEEECTTSSSEEEEEEE
T ss_pred -cccchhhhcCCCCcEEEEEEcCCCCEEEEEEEE
Confidence 344455555555444333344455 5655543
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=6.4e-25 Score=233.06 Aligned_cols=329 Identities=9% Similarity=0.112 Sum_probs=217.5
Q ss_pred eEEEEECCCCCeEEEeeCCceEEEEecCCceeE-EEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCC
Q psy12697 143 VYSVAFSPDGKFLASGSFDKCVHIWSARTGQLV-HSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGH 221 (602)
Q Consensus 143 V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h 221 (602)
+..+.|+ |+.+++++.|+ | +||+.+|+.+ ..+....... ..++... .....+
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~----------------------~~l~~~~-~~~~~~ 80 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLN----------------------ALMPEGC-KFQTTD 80 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHH----------------------TTC-----------
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhh----------------------hhccchh-cccccc
Confidence 4446777 66677777788 8 9999999873 2221110000 0000000 001123
Q ss_pred CcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCC
Q psy12697 222 ESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYD 301 (602)
Q Consensus 222 ~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 301 (602)
...|.+++|+|+ ..++.+. ++.|++||+.+++.. .. ..+...+.+++|+|||+.|+++ .+
T Consensus 81 ~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~------~l-----------~~~~~~~~~~~~SpdG~~la~~-~~ 140 (706)
T 2z3z_A 81 AFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVT------YL-----------FDTNEETASLDFSPVGDRVAYV-RN 140 (706)
T ss_dssp -CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEE------EE-----------ECCTTCCTTCEECTTSSEEEEE-ET
T ss_pred ccCceeEEECCC-CeEEEEE-CCEEEEEECCCCceE------Ec-----------cCCcccccCCcCCCCCCEEEEE-EC
Confidence 357999999999 6666654 599999999765321 11 1123568889999999999985 68
Q ss_pred CeEEEEcCCC-----cceee-cccccCC--------------eEEEEEccCCCEEEEEe---------------------
Q psy12697 302 GYARIWTSDG-----SLKST-LGQHKGP--------------IFALKWNKRGNYILSAG--------------------- 340 (602)
Q Consensus 302 g~i~i~~~~~-----~~~~~-~~~~~~~--------------i~~~~~~~~~~~l~~~~--------------------- 340 (602)
+.|++|++.+ ..... ...+... +.++.|+|||++|++++
T Consensus 141 ~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~ 220 (706)
T 2z3z_A 141 HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAES 220 (706)
T ss_dssp TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEE
T ss_pred CeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCce
Confidence 9999999875 43333 3333332 48899999999999987
Q ss_pred ------------cCCcEEEEeCCCCceeEEee--eccCCeeeeeccCCCe-EEEeeCCC-----eEEEEEcCCCceeeEe
Q psy12697 341 ------------VDKTTIIWDAASGQCEQQFS--FHSAPALDVDWQSNTS-FASCSTDQ-----HIHVCKLHSDKPVKSF 400 (602)
Q Consensus 341 ------------~dg~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~-----~i~i~d~~~~~~~~~~ 400 (602)
.+..|.+||+.+++...... .+...+..+.|+|++. +++++.++ .|++||+.+++....+
T Consensus 221 ~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 221 KPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp EEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEE
T ss_pred EEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEE
Confidence 34679999999887654432 3456688999999976 66666554 8999999998433333
Q ss_pred c-c-CCC---CeEEEEECC--CCCEEEEEECCCeEEEEeCC-CCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeee
Q psy12697 401 E-G-HTN---EVNAIKWDP--QGLLLASCSDDMTLKIWSLD-KDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFIL 472 (602)
Q Consensus 401 ~-~-~~~---~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 472 (602)
. . +.. .+..++|+| +|+++++++.|+.++||+++ ++..+..+..
T Consensus 301 ~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~---------------------------- 352 (706)
T 2z3z_A 301 FVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK---------------------------- 352 (706)
T ss_dssp EEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC----------------------------
T ss_pred EEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCC----------------------------
Confidence 2 2 222 246789999 99999999999999999876 4554544433
Q ss_pred eeccCCccCCeEE-EEEccCCCEEEEEeC-CC----eEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCC---
Q psy12697 473 KSTLGQHKGPIFA-LKWNKRGNYILSAGV-DK----TTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTD--- 542 (602)
Q Consensus 473 ~~~~~~~~~~v~~-i~~s~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d--- 542 (602)
+...+.. ++|+|+|+.|+.++. ++ .|..||+.+++ ...+. |...+.+++|+||| .++....+
T Consensus 353 ------~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~ 424 (706)
T 2z3z_A 353 ------GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTV 424 (706)
T ss_dssp ------SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSC
T ss_pred ------CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCC
Confidence 3344544 677888887766554 43 67888887776 33444 66779999999999 66665443
Q ss_pred -CcEEEeecCCCC
Q psy12697 543 -QHIHVCKLHSDK 554 (602)
Q Consensus 543 -~~i~iw~~~~~~ 554 (602)
+.|++||+.+++
T Consensus 425 p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 425 PRKVTVTNIGKGS 437 (706)
T ss_dssp SCEEEEEESSSCE
T ss_pred CcEEEEEECCCCe
Confidence 569999998876
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=7.6e-25 Score=233.35 Aligned_cols=367 Identities=12% Similarity=0.081 Sum_probs=239.7
Q ss_pred CCCcccCCcceeccceeeeecccceeeeeeeccCC---ceEEEEECCCCCeEEEeeCC---------ceEEEEecCCcee
Q psy12697 107 TGPAITNGEEVHRLTLPLWDVERGECLNTLTRHTE---PVYSVAFSPDGKFLASGSFD---------KCVHIWSARTGQL 174 (602)
Q Consensus 107 ~~~~~~~~~~~~~~~i~vwd~~~~~~~~~l~~h~~---~V~~~~~s~d~~~l~s~~~d---------~~v~iwd~~~~~~ 174 (602)
++.++..+ .+++|++||+.+++....+.+|.. .|.+++|||||++|++++.+ +.|.+||+.+++.
T Consensus 27 dg~~~~~~---~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 103 (723)
T 1xfd_A 27 DTEFIYRE---QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP 103 (723)
T ss_dssp SSCBCCCC---SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC
T ss_pred CCcEEEEe---CCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce
Confidence 34455442 356999999999999888888876 49999999999999999764 7888999998875
Q ss_pred EEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCC
Q psy12697 175 VHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDS 254 (602)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~ 254 (602)
. .+. ...+|...+..++|+|||+.|++++. +.|++|++.++
T Consensus 104 ~-~l~-------------------------------------~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g 144 (723)
T 1xfd_A 104 Q-SLD-------------------------------------PPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGK 144 (723)
T ss_dssp E-ECC-------------------------------------CTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSS
T ss_pred E-ecc-------------------------------------CCccccccccccEECCCCCEEEEEEC-CeEEEEECCCC
Confidence 2 111 11235556888999999999999886 78999999876
Q ss_pred CCCCCccceE----EEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCC-CeEEEEcCCCcceeecccccCCeEEEEE
Q psy12697 255 TKKDPKELQI----VLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYD-GYARIWTSDGSLKSTLGQHKGPIFALKW 329 (602)
Q Consensus 255 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g~i~i~~~~~~~~~~~~~~~~~i~~~~~ 329 (602)
.......... .... ..-.........+.+++|+|||+.|++++.+ +.+.+|++.... ..+...+..+.|
T Consensus 145 ~~~~~~~~~~~~~~~~g~--~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 218 (723)
T 1xfd_A 145 QAIRVVSTGKEGVIYNGL--SDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYT----GSIYPTVKPYHY 218 (723)
T ss_dssp CCEEEECCCBTTTEEEEE--CCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCS----SSSSCCCEEEEC
T ss_pred ceEEEecCCCCCceECcc--cceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccC----CcCCCcceeccC
Confidence 5421000000 0000 0000000001234789999999999988765 466777654211 113345788999
Q ss_pred ccCCCEEEEEecCCcEEEEeCCCCceeEEeeec------cCCeeeeeccCCCeEEE-ee----CCCeEEEEEcCCCceee
Q psy12697 330 NKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH------SAPALDVDWQSNTSFAS-CS----TDQHIHVCKLHSDKPVK 398 (602)
Q Consensus 330 ~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~----~~~~i~i~d~~~~~~~~ 398 (602)
.++|.. ..+..|.+||+.+++....+..+ ...+..+.|+|++.+++ .. .+..|++||+.+++...
T Consensus 219 ~~~G~~----~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 294 (723)
T 1xfd_A 219 PKAGSE----NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK 294 (723)
T ss_dssp CBTTSC----CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE
T ss_pred CCCCCC----CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE
Confidence 888763 33458999999998865555543 45678899999987653 32 23579999999988766
Q ss_pred EeccC-CCCe----EEEEECCCCCEEEE--EECCC------eEEEEeC-CCCee--eEeeccccccEEEEEECCCCCCCC
Q psy12697 399 SFEGH-TNEV----NAIKWDPQGLLLAS--CSDDM------TLKIWSL-DKDNC--VHDLQAHNKEIYTIKWSPTGPETS 462 (602)
Q Consensus 399 ~~~~~-~~~i----~~~~~~~~~~~l~~--~~~dg------~i~iwd~-~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~ 462 (602)
.+..+ ...+ ..++|+|||+.|+. +..++ .|.+||+ ..+.. ...+..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~------------------ 356 (723)
T 1xfd_A 295 KHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITS------------------ 356 (723)
T ss_dssp EEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCC------------------
T ss_pred EEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeec------------------
Confidence 65443 3333 37899999997775 45667 5666773 33320 222221
Q ss_pred CCCcceeeeeeeccCCccCCeEE-EEEccCCCEEEEEeCC---CeEEEEeCCCCc--eeeeecc---cCCCeeEeeecCC
Q psy12697 463 NPNMSLIFILKSTLGQHKGPIFA-LKWNKRGNYILSAGVD---KTTIIWDAASGQ--CEQQFSF---HSAPALDVDWQSN 533 (602)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~v~~-i~~s~~~~~l~s~~~d---g~i~iwd~~~~~--~~~~~~~---~~~~v~~~~~s~~ 533 (602)
+...+.. ++|+|||++|+..+.+ +.+++|++.... ....+.. |...+..++|+||
T Consensus 357 ----------------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spd 420 (723)
T 1xfd_A 357 ----------------GDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHS 420 (723)
T ss_dssp ----------------SSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTT
T ss_pred ----------------CCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCC
Confidence 1222333 6889999999876655 789999986432 3344443 5677899999999
Q ss_pred c-eEEEe-eCCC--cEEEeecCCCCceeee
Q psy12697 534 T-SFASC-STDQ--HIHVCKLHSDKPVKSF 559 (602)
Q Consensus 534 ~-~l~~~-~~d~--~i~iw~~~~~~~~~~~ 559 (602)
| .++.. +..+ ...+++..++..+..+
T Consensus 421 g~~l~~~~~~~~~p~~~~~~~~~~~~~~~~ 450 (723)
T 1xfd_A 421 MDFFLLKCEGPGVPMVTVHNTTDKKKMFDL 450 (723)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCCCCeEEEEECCCCCEEEEe
Confidence 9 55543 3333 3445565555544443
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=1.3e-23 Score=203.19 Aligned_cols=270 Identities=11% Similarity=0.105 Sum_probs=210.3
Q ss_pred CceeEEeeCCCCCeEEEEeC-------CCeEEEEcCCC-cceeecccccCCeEEEEEccCCCEEEEE-ecCCcEEEEeCC
Q psy12697 281 KDVTSLDWNNNGSFLATGSY-------DGYARIWTSDG-SLKSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAA 351 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~-------dg~i~i~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~wd~~ 351 (602)
..+..++|+|+++.+++++. ++.|.+||... +....+. ....+..++|+|++++++++ ..++.|.+||..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH-NDLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE-ESSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe-cCCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 56789999999998888774 56899999874 4444443 34557889999999966554 557999999999
Q ss_pred CCceeEEeeeccCC---------eeeeeccCCCe-EEEee--CCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEE
Q psy12697 352 SGQCEQQFSFHSAP---------ALDVDWQSNTS-FASCS--TDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLL 419 (602)
Q Consensus 352 ~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~~~~--~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 419 (602)
+++....+..+... +..+.|++++. ++++. .++.|.+||..+++.+..+..+...+..++|+|++++|
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRL 199 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEE
Confidence 99988877764422 67789998854 44444 47899999999999888887666678899999999999
Q ss_pred EEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe
Q psy12697 420 ASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG 499 (602)
Q Consensus 420 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~ 499 (602)
++++.++.|.+||+.+++....+.... .++...+..++|+|+|+++++++
T Consensus 200 ~~~~~~~~i~~~d~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 200 YTTNADGELITIDTADNKILSRKKLLD------------------------------DGKEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCC------------------------------SSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEcCCCeEEEEECCCCeEEEEEEcCC------------------------------CCCCcccceEEECCCCCEEEEEe
Confidence 999999999999999988776654311 11345577889999999777666
Q ss_pred C-CCeEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEee-CCCcEEEeecCCCCceeeeecccccceEEEEecCCc
Q psy12697 500 V-DKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCS-TDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGG 576 (602)
Q Consensus 500 ~-dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (602)
. ++.|.+||+.+++.+..+.... ...++|+|++ .+++++ .++.|.+||+.+++.+..+. ....
T Consensus 250 ~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~------------~~~~ 315 (353)
T 3vgz_A 250 SKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD------------TPTH 315 (353)
T ss_dssp SSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE------------CCSE
T ss_pred CCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe------------cCCC
Confidence 5 4999999999999888777543 3679999999 555554 78999999987776555543 2346
Q ss_pred EEEEEECCCCCeEEEeccC
Q psy12697 577 IFEVCWNSRGDKVGASASD 595 (602)
Q Consensus 577 i~~l~~spdg~~l~~~~~d 595 (602)
+.+++|+|||++|+++..+
T Consensus 316 ~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 316 PNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEECTTSCEEEEEEEC
T ss_pred CCeEEEcCCCCEEEEEEcc
Confidence 7899999999988887766
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=1.4e-23 Score=202.19 Aligned_cols=278 Identities=11% Similarity=0.117 Sum_probs=181.1
Q ss_pred CCCcceEEEEEcCCCCEEEEeeCC-CcEEEEeCC--CCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEE
Q psy12697 220 GHESEVFICAWNPVKDFLASGSGD-STARIWDMT--DSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLA 296 (602)
Q Consensus 220 ~h~~~v~~~~~~~~~~~l~s~~~d-g~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 296 (602)
.|...+.+++|+|++++|++++.+ +.|.+|++. ++.. ...... .....+..++|+|++++++
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~------~~~~~~---------~~~~~~~~~~~s~dg~~l~ 99 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL------TFAAES---------ALPGSLTHISTDHQGQFVF 99 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE------EEEEEE---------ECSSCCSEEEECTTSSEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce------eecccc---------ccCCCCcEEEEcCCCCEEE
Confidence 366678889999999999888886 999999997 3321 111110 1123688999999999887
Q ss_pred EEeC-CCeEEEEcCC----CcceeecccccCCeEEEEEccCCCEEEEEe-cCCcEEEEeCCC-CceeEEeeeccCCeeee
Q psy12697 297 TGSY-DGYARIWTSD----GSLKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAAS-GQCEQQFSFHSAPALDV 369 (602)
Q Consensus 297 ~~~~-dg~i~i~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~ 369 (602)
+++. ++.|.+|++. ......+. ....+.+++|+|+++++++++ .++.|.+||+.+ ++......
T Consensus 100 ~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--------- 169 (343)
T 1ri6_A 100 VGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDP--------- 169 (343)
T ss_dssp EEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE---------
T ss_pred EEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecc---------
Confidence 7665 7899999983 12223333 334588999999999888877 789999999876 43221110
Q ss_pred eccCCCeEEEeeCCCeEEEEEcCCCceeeEec-cCCCCeEEEEECCCCCEEEEEE-CCCeEEEEeCCC--CeeeEeeccc
Q psy12697 370 DWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE-GHTNEVNAIKWDPQGLLLASCS-DDMTLKIWSLDK--DNCVHDLQAH 445 (602)
Q Consensus 370 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~--~~~~~~~~~~ 445 (602)
..+. .....+..++|+|++++|++++ .++.|.+|++.. ++....
T Consensus 170 ----------------------------~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~---- 217 (343)
T 1ri6_A 170 ----------------------------AEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECV---- 217 (343)
T ss_dssp ----------------------------EEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEE----
T ss_pred ----------------------------cccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEE----
Confidence 0001 1223577899999999776655 789999999953 322100
Q ss_pred cccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE-eCCCeEEEEeCC--C--Cceeeeecc
Q psy12697 446 NKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAA--S--GQCEQQFSF 520 (602)
Q Consensus 446 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~-~~dg~i~iwd~~--~--~~~~~~~~~ 520 (602)
..+...+.+ ......+..++|+|+|++|+++ ..++.|.+||+. + .+.+..+..
T Consensus 218 ----~~~~~~~~~------------------~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~ 275 (343)
T 1ri6_A 218 ----QTLDMMPEN------------------FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT 275 (343)
T ss_dssp ----EEEECSCTT------------------CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC
T ss_pred ----eeccccCcc------------------ccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC
Confidence 000000100 0123456789999999888754 478999999998 3 344455554
Q ss_pred cCCCeeEeeecCCc-eEEEee-CCCcEEEeecC--CCCceeeeecccccceEEEEecCCcEEEEEECCCCC
Q psy12697 521 HSAPALDVDWQSNT-SFASCS-TDQHIHVCKLH--SDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGD 587 (602)
Q Consensus 521 ~~~~v~~~~~s~~~-~l~~~~-~d~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~ 587 (602)
+.. +..++|+|++ .|++++ .++.|.+|+++ +++. ..+..+.......+++|.|+.+
T Consensus 276 ~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~----------~~~~~~~~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 276 ETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL----------HEKGRYAVGQGPMWVVVNAHEG 335 (343)
T ss_dssp SSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE----------EEEEEEECSSSCCEEEEEEEC-
T ss_pred CCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee----------eEccccccCCCCeeEEEEcccC
Confidence 444 8899999999 677766 68999999654 3321 1122222234466777777654
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=1.2e-23 Score=202.01 Aligned_cols=280 Identities=9% Similarity=0.079 Sum_probs=203.0
Q ss_pred CeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCc-ceEEEEEc
Q psy12697 153 KFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHES-EVFICAWN 231 (602)
Q Consensus 153 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~-~v~~~~~~ 231 (602)
++|++++.++.|.+||+.+++.+..+.. ++.. .+..++|+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~s 42 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITI---------------------------------------ADAGPTPMVPMVA 42 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEEC---------------------------------------TTCTTCCCCEEEC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEc---------------------------------------CCCCCCccceEEc
Confidence 5789999999999999999988765431 1211 36778999
Q ss_pred CCCCEEE-EeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEe-----------
Q psy12697 232 PVKDFLA-SGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGS----------- 299 (602)
Q Consensus 232 ~~~~~l~-s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------- 299 (602)
|+++.++ ++..++.|.+||+.+++....... .. ...+...+.+++|+|+|++++++.
T Consensus 43 ~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~----------~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 43 PGGRIAYATVNKSESLVKIDLVTGETLGRIDL----------ST-PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFE 111 (337)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTCCEEEEEEC----------CB-TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred CCCCEEEEEeCCCCeEEEEECCCCCeEeeEEc----------CC-cccccccccceEECCCCCEEEEEeccccccccccc
Confidence 9997664 555678999999987653211100 00 000112567899999999998886
Q ss_pred -CCCeEEEEcCCCc-ceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCe-
Q psy12697 300 -YDGYARIWTSDGS-LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS- 376 (602)
Q Consensus 300 -~dg~i~i~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~- 376 (602)
.++.|.+||.... ....+. ....+.+++|+|++++|+++ ++.|.+||+.+++....+..... ...+.|+|++.
T Consensus 112 ~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~ 187 (337)
T 1pby_B 112 VQPTRVALYDAETLSRRKAFE-APRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLA 187 (337)
T ss_dssp ECCCEEEEEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCC
T ss_pred ccCceEEEEECCCCcEEEEEe-CCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccE
Confidence 5799999998754 333333 34567889999999988887 68899999999988776654431 11336677654
Q ss_pred EEEee-CCC-----------------------eEEEEEcCCCcee-eEeccCCCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy12697 377 FASCS-TDQ-----------------------HIHVCKLHSDKPV-KSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIW 431 (602)
Q Consensus 377 ~~~~~-~~~-----------------------~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw 431 (602)
+++.. .++ .|.+||+.+++.. ..+..+...+.+++|+|++++++++ ++.|.+|
T Consensus 188 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~ 265 (337)
T 1pby_B 188 VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESF 265 (337)
T ss_dssp CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEE
T ss_pred EeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEE
Confidence 22222 222 4789999988764 3344566678899999999999988 6899999
Q ss_pred eCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC
Q psy12697 432 SLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS 511 (602)
Q Consensus 432 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~ 511 (602)
|+.+++.+..+... ..+.+++|+|+|++|++++.++.|.+||+.+
T Consensus 266 d~~~~~~~~~~~~~-----------------------------------~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 266 DLEKNASIKRVPLP-----------------------------------HSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp ETTTTEEEEEEECS-----------------------------------SCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred ECCCCcCcceecCC-----------------------------------CceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 99988776555321 2356788888999999999999999999999
Q ss_pred CceeeeecccCC
Q psy12697 512 GQCEQQFSFHSA 523 (602)
Q Consensus 512 ~~~~~~~~~~~~ 523 (602)
++.+..+..+..
T Consensus 311 ~~~~~~~~~~~~ 322 (337)
T 1pby_B 311 LEKKGQVDLPGN 322 (337)
T ss_dssp CCEEEEEECGGG
T ss_pred CcEEEEEEcCCC
Confidence 998888775543
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=7.1e-23 Score=196.14 Aligned_cols=283 Identities=8% Similarity=0.030 Sum_probs=194.0
Q ss_pred EEECCCCC-eEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcc
Q psy12697 146 VAFSPDGK-FLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESE 224 (602)
Q Consensus 146 ~~~s~d~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~ 224 (602)
..|.++++ .+++++.++.|.+||..+++.+..+. .+...
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~----------------------------------------~~~~~ 42 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQIT----------------------------------------LGYDF 42 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEE----------------------------------------CCCCE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEE----------------------------------------ccCCc
Confidence 34666555 46778889999999999998875432 23445
Q ss_pred eEEEEEcCCCCEEEEeeC-CCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCC-
Q psy12697 225 VFICAWNPVKDFLASGSG-DSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDG- 302 (602)
Q Consensus 225 v~~~~~~~~~~~l~s~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg- 302 (602)
+ .++|+|+++++++++. ++.|.+||+.+++.. ..... .+..+..+++|+|+|++++++..++
T Consensus 43 ~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~-----~~~~~----------~~~~~~~~~~~s~dg~~l~~~~~~~~ 106 (331)
T 3u4y_A 43 V-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK-----VVAIQ----------EGQSSMADVDITPDDQFAVTVTGLNH 106 (331)
T ss_dssp E-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE-----EEEEE----------ECSSCCCCEEECTTSSEEEECCCSSS
T ss_pred c-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee-----EEecc----------cCCCCccceEECCCCCEEEEecCCCC
Confidence 5 8999999997776665 899999999876531 11111 1123344499999999999665553
Q ss_pred --eEEEEcCCCc-ceeecccccCCeEEEEEccCCCEEEEE-ecCCc-EEEEeCCCCceeE----EeeeccCCeeeeeccC
Q psy12697 303 --YARIWTSDGS-LKSTLGQHKGPIFALKWNKRGNYILSA-GVDKT-TIIWDAASGQCEQ----QFSFHSAPALDVDWQS 373 (602)
Q Consensus 303 --~i~i~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~-i~~wd~~~~~~~~----~~~~~~~~~~~~~~~~ 373 (602)
.|.+||.... ....+. ......+++|+|+|++++++ ..++. +.+|++.....+. ...........+.|+|
T Consensus 107 ~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp 185 (331)
T 3u4y_A 107 PFNMQSYSFLKNKFISTIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP 185 (331)
T ss_dssp SCEEEEEETTTTEEEEEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT
T ss_pred cccEEEEECCCCCeEEEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC
Confidence 8999998744 444433 44567899999999866655 44578 9999987644332 1122344578899999
Q ss_pred CCe-E-EEeeCCCeEEEEEcCCCce---eeEeccCCCCeEEEEECCCCCEEEEEE-CCCeEEEEeCCCCee--eEeeccc
Q psy12697 374 NTS-F-ASCSTDQHIHVCKLHSDKP---VKSFEGHTNEVNAIKWDPQGLLLASCS-DDMTLKIWSLDKDNC--VHDLQAH 445 (602)
Q Consensus 374 ~~~-~-~~~~~~~~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~--~~~~~~~ 445 (602)
++. + +++..++.|.+||+.+++. +..+..+ ..+..++|+|+|++|++++ .++.|.+||+.+++. +..+...
T Consensus 186 dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~ 264 (331)
T 3u4y_A 186 DGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHG 264 (331)
T ss_dssp TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECC
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccc
Confidence 975 4 4445689999999999887 7777643 5678999999999776665 478899999998765 2222110
Q ss_pred cccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeC-CCeEEEEeCCCCc
Q psy12697 446 NKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGV-DKTTIIWDAASGQ 513 (602)
Q Consensus 446 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~-dg~i~iwd~~~~~ 513 (602)
+... .........++|+|||++|++++. ++.|.+||+....
T Consensus 265 ------~~~~---------------------~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 265 ------LLID---------------------PRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp ------CCCC---------------------CGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred ------cccC---------------------CCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 0000 001122256899999998876554 6799999998654
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=2.9e-24 Score=202.31 Aligned_cols=254 Identities=14% Similarity=0.163 Sum_probs=194.7
Q ss_pred cceeccceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCC-ceeEEEeeccCceEEEEeCCCC
Q psy12697 115 EEVHRLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSART-GQLVHSYKGTGGIFEVCWNSRG 193 (602)
Q Consensus 115 ~~~~~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~ 193 (602)
....+++|++||+.+++.. .+..|...|.+++|+|||++|++++ ++.|.+||+.+ ++.....
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~--------------- 79 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVD--------------- 79 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECC---------------
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEec---------------
Confidence 3456789999999998866 5666899999999999999999986 88999999998 7654322
Q ss_pred CCCCCCCCccccccccccCCcceEeeCC-CcceEEEEEcCCCCEEEEee--CCCcEEEEeCCCCCCCCCccceEEEEEEe
Q psy12697 194 TPPNPPESMEVDASIEIPQSKATKLIGH-ESEVFICAWNPVKDFLASGS--GDSTARIWDMTDSTKKDPKELQIVLRHCI 270 (602)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h-~~~v~~~~~~~~~~~l~s~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 270 (602)
.+| ...+.+++|+|++++|++++ .++...+|.++...... .
T Consensus 80 -------------------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~----~------- 123 (297)
T 2ojh_A 80 -------------------------TGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP----R------- 123 (297)
T ss_dssp -------------------------CTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC----E-------
T ss_pred -------------------------cccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce----E-------
Confidence 123 46688899999999999998 44566776664322110 0
Q ss_pred cCCCcccCCCCceeEEeeCCCCCeEE-EEeCCCeEEEEcC--CCcceeecccccCCeEEEEEccCCCEEEEEe-cCCcEE
Q psy12697 271 SKGGTEVPSNKDVTSLDWNNNGSFLA-TGSYDGYARIWTS--DGSLKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTI 346 (602)
Q Consensus 271 ~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~ 346 (602)
.......+.+++|+|+++.|+ ++..++.+.+|++ .+.....+..+...+.+++|+|++++|+.++ .++.+.
T Consensus 124 -----~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 198 (297)
T 2ojh_A 124 -----LMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQ 198 (297)
T ss_dssp -----ECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred -----EeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCcc
Confidence 011123488899999999887 6778898999884 4556667777888999999999999888766 588999
Q ss_pred EEeCC-CCceeEEeeeccCCeeeeeccCCCe-EEEeeCC-----------CeEEEEEcCCCce--eeEeccCCCCeEEEE
Q psy12697 347 IWDAA-SGQCEQQFSFHSAPALDVDWQSNTS-FASCSTD-----------QHIHVCKLHSDKP--VKSFEGHTNEVNAIK 411 (602)
Q Consensus 347 ~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------~~i~i~d~~~~~~--~~~~~~~~~~i~~~~ 411 (602)
+|++. .+.....+..+...+..+.|+|++. +++++.+ +.|++||+.+++. +..+.+|...+.+++
T Consensus 199 i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 278 (297)
T 2ojh_A 199 IWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPN 278 (297)
T ss_dssp EEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCC
T ss_pred EEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccce
Confidence 99876 4556666766777888899999865 5555544 5699999998865 444557888899999
Q ss_pred ECCCCCEEEEEECCC
Q psy12697 412 WDPQGLLLASCSDDM 426 (602)
Q Consensus 412 ~~~~~~~l~~~~~dg 426 (602)
|+|++++|++++.+.
T Consensus 279 ~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 279 WSPDGDEFAYVRYFP 293 (297)
T ss_dssp BCTTSSEEEEEEECC
T ss_pred ECCCCCEEEEEEecc
Confidence 999999998887654
No 145
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.93 E-value=2.9e-24 Score=228.42 Aligned_cols=321 Identities=13% Similarity=0.158 Sum_probs=221.1
Q ss_pred EEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCc-
Q psy12697 145 SVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHES- 223 (602)
Q Consensus 145 ~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~- 223 (602)
.++|+|||++++++ .|++|++||+.+++....+. +|..
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~----------------------------------------~~~~~ 58 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILS----------------------------------------NRTMK 58 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEEC----------------------------------------HHHHH
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEc----------------------------------------ccccc
Confidence 57899999766665 69999999999988754332 2222
Q ss_pred --ceEEEEEcCCCCEEEEeeC---------CCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCC
Q psy12697 224 --EVFICAWNPVKDFLASGSG---------DSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNG 292 (602)
Q Consensus 224 --~v~~~~~~~~~~~l~s~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 292 (602)
.+.+++|+|||++|++++. ++.|++||+.+++......+ ...+..++|+|||
T Consensus 59 ~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-----------------~~~~~~~~~SPDG 121 (719)
T 1z68_A 59 SVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-----------------PRPIQYLCWSPVG 121 (719)
T ss_dssp TTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-----------------CSSBCCEEECSST
T ss_pred ccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-----------------CcccccceECCCC
Confidence 3889999999999998876 78999999988754111111 1458889999999
Q ss_pred CeEEEEeCCCeEEEEcCCCcceeec--ccccCCe-----------------EEEEEccCCCEEEEEecCC----------
Q psy12697 293 SFLATGSYDGYARIWTSDGSLKSTL--GQHKGPI-----------------FALKWNKRGNYILSAGVDK---------- 343 (602)
Q Consensus 293 ~~l~~~~~dg~i~i~~~~~~~~~~~--~~~~~~i-----------------~~~~~~~~~~~l~~~~~dg---------- 343 (602)
+.|+.+. ++.|++|+..+.....+ .++...| .+++|+|||++|++++.|.
T Consensus 122 ~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~ 200 (719)
T 1z68_A 122 SKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSY 200 (719)
T ss_dssp TCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEE
T ss_pred CEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeec
Confidence 9999885 78999999875433333 2232222 4899999999999887652
Q ss_pred ------------------------cEEEEeCCCCcee--EE------eeeccCCeeeeeccCCCeEEEeeC-C----CeE
Q psy12697 344 ------------------------TTIIWDAASGQCE--QQ------FSFHSAPALDVDWQSNTSFASCST-D----QHI 386 (602)
Q Consensus 344 ------------------------~i~~wd~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~-~----~~i 386 (602)
.|.+||+.+++.. .. +..+...+..+.|+|++.++.... . ..|
T Consensus 201 ~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l 280 (719)
T 1z68_A 201 YGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVL 280 (719)
T ss_dssp CCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEE
T ss_pred cCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEE
Confidence 7889999987753 11 223556788999999987665422 1 248
Q ss_pred EEEE----cCCCceeeEe----ccCCCCeE-----EEEECCCCCEEEE--EECCC--eEEEEeCCCCeeeEeeccccccE
Q psy12697 387 HVCK----LHSDKPVKSF----EGHTNEVN-----AIKWDPQGLLLAS--CSDDM--TLKIWSLDKDNCVHDLQAHNKEI 449 (602)
Q Consensus 387 ~i~d----~~~~~~~~~~----~~~~~~i~-----~~~~~~~~~~l~~--~~~dg--~i~iwd~~~~~~~~~~~~~~~~i 449 (602)
.+|| ..+++....+ .+|...+. .+.|+|||+.|+. ...+| .|.+||+.+++ ...+..
T Consensus 281 ~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~----- 354 (719)
T 1z68_A 281 SICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITS----- 354 (719)
T ss_dssp EEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSC-----
T ss_pred EEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEeccc-----
Confidence 8899 7777665555 46666666 8899999996654 44555 57777776554 222222
Q ss_pred EEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCC-----CeEEEEeCCC--Cce-eeeec--
Q psy12697 450 YTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVD-----KTTIIWDAAS--GQC-EQQFS-- 519 (602)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d-----g~i~iwd~~~--~~~-~~~~~-- 519 (602)
+...+..+.++ +++.|+..+.+ +..++|.+.. +.. ...+.
T Consensus 355 -----------------------------~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~ 404 (719)
T 1z68_A 355 -----------------------------GKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCH 404 (719)
T ss_dssp -----------------------------SSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTT
T ss_pred -----------------------------CceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCc
Confidence 23345555666 77777766654 7788887753 421 23332
Q ss_pred --ccCCCeeEeeecCCc-eEE-EeeCC--CcEEEeecCCCCceeeee
Q psy12697 520 --FHSAPALDVDWQSNT-SFA-SCSTD--QHIHVCKLHSDKPVKSFE 560 (602)
Q Consensus 520 --~~~~~v~~~~~s~~~-~l~-~~~~d--~~i~iw~~~~~~~~~~~~ 560 (602)
+|...+..+.|+||+ .++ +++.+ ..+.+||+.+++.+..+.
T Consensus 405 ~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~~~ 451 (719)
T 1z68_A 405 LRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILE 451 (719)
T ss_dssp TTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEEEEEE
T ss_pred cCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEEEEee
Confidence 255678889999999 555 34333 468999998887665554
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=1.7e-23 Score=196.94 Aligned_cols=253 Identities=14% Similarity=0.164 Sum_probs=189.1
Q ss_pred EeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCC-CceeEEeeec-cCCeeeeeccCCC
Q psy12697 298 GSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS-GQCEQQFSFH-SAPALDVDWQSNT 375 (602)
Q Consensus 298 ~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~-~~~~~~~~~~-~~~~~~~~~~~~~ 375 (602)
++.++.|++||........+..|...+.+++|+|++++|++++ ++.|.+||+.+ ++.......+ ...+.++.|+|++
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG 96 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred CCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence 4578999999998777777778999999999999999999876 88999999999 8776665554 3678889999987
Q ss_pred e-EEEee--C--CCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEE-EEECCCeEEEEeCCC-CeeeEeecccccc
Q psy12697 376 S-FASCS--T--DQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLA-SCSDDMTLKIWSLDK-DNCVHDLQAHNKE 448 (602)
Q Consensus 376 ~-~~~~~--~--~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~-~~~~~~~~~~~~~ 448 (602)
. +++++ . ...|..++..+++ ...+..+ ..+..++|+|+++.|+ +++.++.+++|+++. ......+.
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~----- 169 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT----- 169 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC-----
T ss_pred CEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc-----
Confidence 5 55555 2 2455555655554 3444433 3488999999999887 778899999998642 12222222
Q ss_pred EEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe-CCCeEEEEeCC-CCceeeeecccCCCee
Q psy12697 449 IYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAA-SGQCEQQFSFHSAPAL 526 (602)
Q Consensus 449 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~dg~i~iwd~~-~~~~~~~~~~~~~~v~ 526 (602)
.+...+.+++|+|+|++|+.++ .++.+.+|++. .+..+..+..|...+.
T Consensus 170 -----------------------------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 220 (297)
T 2ojh_A 170 -----------------------------HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDW 220 (297)
T ss_dssp -----------------------------CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEE
T ss_pred -----------------------------cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccC
Confidence 2455677888888999888766 58999999986 5666777777888899
Q ss_pred EeeecCCc-eEEEeeCC-----------CcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEecc
Q psy12697 527 DVDWQSNT-SFASCSTD-----------QHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASAS 594 (602)
Q Consensus 527 ~~~~s~~~-~l~~~~~d-----------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~ 594 (602)
.++|+|++ .|++++.+ +.|++||+.+++....... ..+...+..++|+|||++|++++.
T Consensus 221 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~---------~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 221 FPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDL---------FGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp EEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEE---------EESTTTSCSCCBCTTSSEEEEEEE
T ss_pred CeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeecc---------CCCCcccccceECCCCCEEEEEEe
Confidence 99999999 88877765 5699999987764332221 012356888999999999988877
Q ss_pred CC
Q psy12697 595 DG 596 (602)
Q Consensus 595 dg 596 (602)
+.
T Consensus 292 ~~ 293 (297)
T 2ojh_A 292 FP 293 (297)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=3.6e-22 Score=193.13 Aligned_cols=269 Identities=10% Similarity=0.051 Sum_probs=206.5
Q ss_pred CCcceEEEEEcCCCCEEEEeeC-------CCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCC
Q psy12697 221 HESEVFICAWNPVKDFLASGSG-------DSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGS 293 (602)
Q Consensus 221 h~~~v~~~~~~~~~~~l~s~~~-------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 293 (602)
....+..++|+|+++++++++. ++.|.+||..+++..... . ....+..++|+|+|+
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~------~-----------~~~~~~~~~~s~dg~ 101 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI------H-----------NDLKPFGATINNTTQ 101 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE------E-----------ESSCCCSEEEETTTT
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE------e-----------cCCCcceEEECCCCC
Confidence 3456889999999998888774 568999999876532111 1 124477899999999
Q ss_pred eEEEE-eCCCeEEEEcCC-CcceeecccccC---------CeEEEEEccCCCEEEEEe--cCCcEEEEeCCCCceeEEee
Q psy12697 294 FLATG-SYDGYARIWTSD-GSLKSTLGQHKG---------PIFALKWNKRGNYILSAG--VDKTTIIWDAASGQCEQQFS 360 (602)
Q Consensus 294 ~l~~~-~~dg~i~i~~~~-~~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~--~dg~i~~wd~~~~~~~~~~~ 360 (602)
+++++ ..++.|.+||.. ++....+..+.. .+.++.|+|+++++++++ .++.|.+||..+++....+.
T Consensus 102 ~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~ 181 (353)
T 3vgz_A 102 TLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ 181 (353)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC
T ss_pred EEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec
Confidence 65554 557999999986 444455544332 268899999999888776 47889999999999888887
Q ss_pred eccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEecc----CCCCeEEEEECCCCCEEEEEECC-CeEEEEeCC
Q psy12697 361 FHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEG----HTNEVNAIKWDPQGLLLASCSDD-MTLKIWSLD 434 (602)
Q Consensus 361 ~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d-g~i~iwd~~ 434 (602)
.....+..+.|++++ .++++..++.|.+||..+++.+..+.. +...+..++|+|+++++++++.+ +.|.+||+.
T Consensus 182 ~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 261 (353)
T 3vgz_A 182 NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTR 261 (353)
T ss_dssp CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETT
T ss_pred CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 566668889999875 577888899999999999988877664 45568899999999987777654 999999999
Q ss_pred CCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe-CCCeEEEEeCCCCc
Q psy12697 435 KDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAASGQ 513 (602)
Q Consensus 435 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~dg~i~iwd~~~~~ 513 (602)
+++.+..+.... ...++|+|+|+++++++ .++.|.+||..+++
T Consensus 262 ~~~~~~~~~~~~------------------------------------~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 262 NGNILAKVAAPE------------------------------------SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp TCCEEEEEECSS------------------------------------CCCEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred CCcEEEEEEcCC------------------------------------CceEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 887766554211 13578889999666555 68999999999999
Q ss_pred eeeeecccCCCeeEeeecCCc-eEEEeeCCC
Q psy12697 514 CEQQFSFHSAPALDVDWQSNT-SFASCSTDQ 543 (602)
Q Consensus 514 ~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~ 543 (602)
.+..+... ..+.+++|+||| .++++..++
T Consensus 306 ~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 306 VVKTFDTP-THPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEEEECC-SEEEEEEECTTSCEEEEEEECC
T ss_pred EEEEEecC-CCCCeEEEcCCCCEEEEEEccc
Confidence 88887754 467899999999 676666554
No 148
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=4.8e-23 Score=197.89 Aligned_cols=271 Identities=9% Similarity=0.029 Sum_probs=200.7
Q ss_pred CEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCC---ceeEEeeCCCCCeEE-EEeCCCeEEEEcCC
Q psy12697 235 DFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNK---DVTSLDWNNNGSFLA-TGSYDGYARIWTSD 310 (602)
Q Consensus 235 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~-~~~~dg~i~i~~~~ 310 (602)
+++++++.++.|.+||+.+++.... .. ... .+..++|+|+++.++ ++..++.|.+||..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~------~~-----------~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 64 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKV------IT-----------IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLV 64 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEE------EE-----------CTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEE------EE-----------cCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECC
Confidence 4789999999999999987643110 00 112 478899999998765 55567899999986
Q ss_pred -Ccceeeccc-c----cCCeEEEEEccCCCEEEEEe------------cCCcEEEEeCCCCceeEEeeeccCCeeeeecc
Q psy12697 311 -GSLKSTLGQ-H----KGPIFALKWNKRGNYILSAG------------VDKTTIIWDAASGQCEQQFSFHSAPALDVDWQ 372 (602)
Q Consensus 311 -~~~~~~~~~-~----~~~i~~~~~~~~~~~l~~~~------------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 372 (602)
++....+.. + ...+..++|+|+++++++++ .++.|.+||+.+++....+.. ...+..+.|+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s 143 (337)
T 1pby_B 65 TGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWA 143 (337)
T ss_dssp TCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEEC
T ss_pred CCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEEC
Confidence 444443332 1 22577899999999998886 579999999999888777665 4457788899
Q ss_pred CCCe-EEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCC------------------------e
Q psy12697 373 SNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDM------------------------T 427 (602)
Q Consensus 373 ~~~~-~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg------------------------~ 427 (602)
|++. ++++ ++.|.+||+.+++.+..+..+.. ...+.|+|+++.++..+.++ .
T Consensus 144 ~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (337)
T 1pby_B 144 RDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG 220 (337)
T ss_dssp TTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEE
T ss_pred CCCCEEEEe--CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccc
Confidence 9876 5555 68999999999988777765431 11237899998776554332 3
Q ss_pred EEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEE
Q psy12697 428 LKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIW 507 (602)
Q Consensus 428 i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iw 507 (602)
|.+||+.+++.. .+. ...+...+.+++|+|||++++++ ++.|.+|
T Consensus 221 v~~~d~~~~~~~-~~~--------------------------------~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~ 265 (337)
T 1pby_B 221 LLTMDLETGEMA-MRE--------------------------------VRIMDVFYFSTAVNPAKTRAFGA--YNVLESF 265 (337)
T ss_dssp EEEEETTTCCEE-EEE--------------------------------EEECSSCEEEEEECTTSSEEEEE--ESEEEEE
T ss_pred eEEEeCCCCCce-Eee--------------------------------cCCCCCceeeEEECCCCCEEEEe--CCeEEEE
Confidence 577887776543 211 11234566788999999999988 7999999
Q ss_pred eCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecc
Q psy12697 508 DAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGH 562 (602)
Q Consensus 508 d~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~ 562 (602)
|+.+++.+..+.. ...+.+++|+||+ +|++++.++.|++||+.+++.+..++..
T Consensus 266 d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 266 DLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp ETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred ECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 9999988877764 3567899999999 8888889999999999998887777644
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=1.6e-22 Score=194.76 Aligned_cols=265 Identities=12% Similarity=0.150 Sum_probs=184.7
Q ss_pred eccceeeeecc-cc--eeeeeeeccCCceEEEEECCCCCeEEEeeCC-ceEEEEecC--CceeEEEeeccCceEEEEeCC
Q psy12697 118 HRLTLPLWDVE-RG--ECLNTLTRHTEPVYSVAFSPDGKFLASGSFD-KCVHIWSAR--TGQLVHSYKGTGGIFEVCWNS 191 (602)
Q Consensus 118 ~~~~i~vwd~~-~~--~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d-~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~ 191 (602)
.++.|++||+. ++ +.+.. ..|...+.+++|+|+|++|++++.+ +.|.+|++. +++....
T Consensus 13 ~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~-------------- 77 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFA-------------- 77 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE--------------
T ss_pred CCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeec--------------
Confidence 35789999995 34 33333 4578889999999999999998876 999999997 5543211
Q ss_pred CCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeC-CCcEEEEeCCCCCCCCCccceEEEEEEe
Q psy12697 192 RGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSG-DSTARIWDMTDSTKKDPKELQIVLRHCI 270 (602)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 270 (602)
..+..+. .+..++|+|++++|++++. ++.|.+||+..+.. ......
T Consensus 78 ------------------------~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~------~~~~~~-- 124 (343)
T 1ri6_A 78 ------------------------AESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP------VGVVDV-- 124 (343)
T ss_dssp ------------------------EEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE------EEEEEE--
T ss_pred ------------------------cccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc------cccccc--
Confidence 1122223 6788999999998877665 88999999952210 001110
Q ss_pred cCCCcccCCCCceeEEeeCCCCCeEEEEe-CCCeEEEEcCCC-ccee-----ecc-cccCCeEEEEEccCCCEEEEEe-c
Q psy12697 271 SKGGTEVPSNKDVTSLDWNNNGSFLATGS-YDGYARIWTSDG-SLKS-----TLG-QHKGPIFALKWNKRGNYILSAG-V 341 (602)
Q Consensus 271 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~~~~~-~~~~-----~~~-~~~~~i~~~~~~~~~~~l~~~~-~ 341 (602)
......+.+++|+|+++++++++ .++.|.+|++.. .... ... .....+..++|+|+++++++++ .
T Consensus 125 ------~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~ 198 (343)
T 1ri6_A 125 ------VEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL 198 (343)
T ss_dssp ------ECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT
T ss_pred ------ccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC
Confidence 11234588999999999888877 889999999864 3221 122 2345788999999999876655 7
Q ss_pred CCcEEEEeCCC--Cce--eEEeeec------cCCeeeeeccCCCe-EE-EeeCCCeEEEEEcC--C--CceeeEeccCCC
Q psy12697 342 DKTTIIWDAAS--GQC--EQQFSFH------SAPALDVDWQSNTS-FA-SCSTDQHIHVCKLH--S--DKPVKSFEGHTN 405 (602)
Q Consensus 342 dg~i~~wd~~~--~~~--~~~~~~~------~~~~~~~~~~~~~~-~~-~~~~~~~i~i~d~~--~--~~~~~~~~~~~~ 405 (602)
++.+.+|++.. ++. ....... ...+..++|+|++. ++ ++..++.|.+||+. + .+.+..+..+..
T Consensus 199 ~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~ 278 (343)
T 1ri6_A 199 NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ 278 (343)
T ss_dssp TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS
T ss_pred CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc
Confidence 89999999953 433 2222211 12455789999874 44 44578999999998 2 234445554444
Q ss_pred CeEEEEECCCCCEEEEEE-CCCeEEEEeC--CCCe
Q psy12697 406 EVNAIKWDPQGLLLASCS-DDMTLKIWSL--DKDN 437 (602)
Q Consensus 406 ~i~~~~~~~~~~~l~~~~-~dg~i~iwd~--~~~~ 437 (602)
+..++|+|+|++|++++ .++.|.+|++ .+++
T Consensus 279 -~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 279 -PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp -CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred -cceEEECCCCCEEEEecCCCCeEEEEEEcCCCce
Confidence 88999999999988888 5799999954 4553
No 150
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=8.1e-22 Score=188.74 Aligned_cols=276 Identities=12% Similarity=0.089 Sum_probs=193.3
Q ss_pred eCCCCCe-EEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEec-CCcEEEEeCCCCce-eEEeeecc
Q psy12697 288 WNNNGSF-LATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGV-DKTTIIWDAASGQC-EQQFSFHS 363 (602)
Q Consensus 288 ~~~~~~~-l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~~wd~~~~~~-~~~~~~~~ 363 (602)
|.+++.. +++...++.|.+||.. ++....+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ...+..+.
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 83 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQ 83 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECS
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCC
Confidence 4454444 6777888999999987 55555555555666 9999999997777665 88999999999988 66777666
Q ss_pred CCeeeeeccCCCeEEEeeCCC----eEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEE-ECCCe-EEEEeCCCCe
Q psy12697 364 APALDVDWQSNTSFASCSTDQ----HIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASC-SDDMT-LKIWSLDKDN 437 (602)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~----~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~-i~iwd~~~~~ 437 (602)
.+..+++|+|++..+.++.++ .|.+||+.+++.+..+..+ ....+++|+|+|++|+++ ..++. |.+|++....
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g 162 (331)
T 3u4y_A 84 SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG 162 (331)
T ss_dssp SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC
T ss_pred CCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCC
Confidence 666659999987644444444 8999999999888777644 457899999999865554 55678 9999987643
Q ss_pred eeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE-eCCCeEEEEeCCCCce--
Q psy12697 438 CVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAASGQC-- 514 (602)
Q Consensus 438 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~-~~dg~i~iwd~~~~~~-- 514 (602)
.+..... . .. ........++|+|+|++++.+ ..++.|.+||+.+++.
T Consensus 163 ~~~~~~~-----~------------------------~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~ 212 (331)
T 3u4y_A 163 VLFDTGQ-----E------------------------FI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENIT 212 (331)
T ss_dssp CEEEEEE-----E------------------------EE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCE
T ss_pred cEeecCC-----c------------------------cc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccc
Confidence 3221110 0 00 123346788999999966554 4689999999999988
Q ss_pred -eeeecccCCCeeEeeecCCc-eEEEe-eCCCcEEEeecCCCCc--eeeeecccccceEEEEecCCcEEEEEECCCCCeE
Q psy12697 515 -EQQFSFHSAPALDVDWQSNT-SFASC-STDQHIHVCKLHSDKP--VKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKV 589 (602)
Q Consensus 515 -~~~~~~~~~~v~~~~~s~~~-~l~~~-~~d~~i~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l 589 (602)
+..+.. ...+..++|+||| +++++ ..++.|.+||+.+++. +..+...... .. ........++|+|||++|
T Consensus 213 ~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~spdg~~l 287 (331)
T 3u4y_A 213 LLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLI---DP-RPLFGANQMALNKTETKL 287 (331)
T ss_dssp EEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCC---CC-GGGTTCCCEEECTTSSEE
T ss_pred eeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccccccccc---CC-CCcccccceEECCCCCEE
Confidence 777764 4667899999999 55544 4678899999988765 3322211000 00 001223568999999998
Q ss_pred EEecc-CCeEEe
Q psy12697 590 GASAS-DGSVFK 600 (602)
Q Consensus 590 ~~~~~-dg~v~i 600 (602)
++++. ++.|.|
T Consensus 288 ~v~~~~~~~v~v 299 (331)
T 3u4y_A 288 FISANISRELKV 299 (331)
T ss_dssp EEEETTTTEEEE
T ss_pred EEecCCCCcEEE
Confidence 76665 557765
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=8.1e-23 Score=211.47 Aligned_cols=270 Identities=15% Similarity=0.159 Sum_probs=198.6
Q ss_pred cCCceEEEEECCCCCeEEEeeC-CceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceE
Q psy12697 139 HTEPVYSVAFSPDGKFLASGSF-DKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATK 217 (602)
Q Consensus 139 h~~~V~~~~~s~d~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (602)
+..+|.+++|+|||++||+++. ||+++||++.+++.. .
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-----------------------------------------~ 58 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-----------------------------------------K 58 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-----------------------------------------E
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-----------------------------------------e
Confidence 3567999999999999999887 999999998766543 2
Q ss_pred eeCCC-cceEEEEEcCCCCEEEEeeC---CCcEEEEeCCC--CCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCC
Q psy12697 218 LIGHE-SEVFICAWNPVKDFLASGSG---DSTARIWDMTD--STKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNN 291 (602)
Q Consensus 218 l~~h~-~~v~~~~~~~~~~~l~s~~~---dg~i~iw~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 291 (602)
+..|. ..+..++|+|| +.+++++. +...++|.+.. ..... .+ .....+...+|+|+
T Consensus 59 lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~--~l---------------~~~~~~~~~~~s~d 120 (582)
T 3o4h_A 59 LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ--RL---------------EAVKPMRILSGVDT 120 (582)
T ss_dssp CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE--EC---------------TTSCSBEEEEEEEC
T ss_pred eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc--cc---------------cCCCCceeeeeCCC
Confidence 23344 57899999999 77777765 55667776654 22110 00 01123446688888
Q ss_pred CCe-EEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecC----CcEEEEeCCCCceeEEeeeccCCe
Q psy12697 292 GSF-LATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVD----KTTIIWDAASGQCEQQFSFHSAPA 366 (602)
Q Consensus 292 ~~~-l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~~wd~~~~~~~~~~~~~~~~~ 366 (602)
|+. +++...++.+.+||+.+.....+..+.. .+++|+|||++|++++.+ +.|.+||+.+++.. .+..+...+
T Consensus 121 g~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~ 197 (582)
T 3o4h_A 121 GEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSF 197 (582)
T ss_dssp SSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEE
T ss_pred CCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCcc
Confidence 754 3333444555699987655555544444 789999999999988777 78999999988765 556677788
Q ss_pred eeeeccCCCe-EEEeeCCC--eEEEEEcCCCceeeEeccCCCCeEEEE--------ECCCCCEEEEEECCCeEEEEeCCC
Q psy12697 367 LDVDWQSNTS-FASCSTDQ--HIHVCKLHSDKPVKSFEGHTNEVNAIK--------WDPQGLLLASCSDDMTLKIWSLDK 435 (602)
Q Consensus 367 ~~~~~~~~~~-~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~l~~~~~dg~i~iwd~~~ 435 (602)
..++|+|++. ++++..++ .|++||+.+++.. .+.+|...+..++ |+|||.++++++.|+.+++|++
T Consensus 198 ~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~-- 274 (582)
T 3o4h_A 198 SSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID-- 274 (582)
T ss_dssp EEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--
T ss_pred ccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--
Confidence 9999999976 55566677 8999999998877 7777877777777 9999999999999999999998
Q ss_pred CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCC---eEEEEeCCC
Q psy12697 436 DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDK---TTIIWDAAS 511 (602)
Q Consensus 436 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg---~i~iwd~~~ 511 (602)
++.... ..+.+.+++|+ +++++++++.+. .+++||..+
T Consensus 275 g~~~~~-------------------------------------~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 275 GERVEA-------------------------------------PQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp TEEECC-------------------------------------CSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred CCeecc-------------------------------------CCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 544321 12346678888 888898888774 477787654
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=8.8e-22 Score=190.08 Aligned_cols=287 Identities=8% Similarity=0.092 Sum_probs=191.5
Q ss_pred EEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcc
Q psy12697 145 SVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESE 224 (602)
Q Consensus 145 ~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~ 224 (602)
.++++++++++++++.+++|.+||+.+++.+..+... ....
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~---------------------------------------~~~~ 44 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMP---------------------------------------DKFG 44 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECS---------------------------------------SCCS
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecC---------------------------------------CCCC
Confidence 4568889999999999999999999999887654321 1124
Q ss_pred eEEEEEcCCCCEEE-EeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCC--
Q psy12697 225 VFICAWNPVKDFLA-SGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYD-- 301 (602)
Q Consensus 225 v~~~~~~~~~~~l~-s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-- 301 (602)
+..++|+|++++++ +...++.|.+||+.+++....... ..........+.+++|+|+|++++++..+
T Consensus 45 ~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~----------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 114 (349)
T 1jmx_B 45 PGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL----------SSVPGEVGRSMYSFAISPDGKEVYATVNPTQ 114 (349)
T ss_dssp SCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES----------CCSTTEEEECSSCEEECTTSSEEEEEEEEEE
T ss_pred CceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc----------ccccccccccccceEECCCCCEEEEEccccc
Confidence 66789999998665 555689999999987643211000 00000001237889999999999998865
Q ss_pred ----------CeEEEEcCCCc-c---eeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccC---
Q psy12697 302 ----------GYARIWTSDGS-L---KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA--- 364 (602)
Q Consensus 302 ----------g~i~i~~~~~~-~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~--- 364 (602)
+.|.+||+... . .... .+...+.+++|+|+++ +++++ +.|.+||+.+++....+.....
T Consensus 115 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~ 190 (349)
T 1jmx_B 115 RLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRK 190 (349)
T ss_dssp ECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCT
T ss_pred ccccccccCCCeEEEEECCCccccceeeec-cCCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCc
Confidence 89999997642 1 1222 2344688999999999 66654 3499999999988776654320
Q ss_pred ---------------------CeeeeeccCCCeEE--EeeCCCeEEEEEcCCCce-eeEeccCCCCeEEEEECC-CCCEE
Q psy12697 365 ---------------------PALDVDWQSNTSFA--SCSTDQHIHVCKLHSDKP-VKSFEGHTNEVNAIKWDP-QGLLL 419 (602)
Q Consensus 365 ---------------------~~~~~~~~~~~~~~--~~~~~~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~-~~~~l 419 (602)
....+.+.+++... .......+..++..+++. ...+..+...+..++|+| +++++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l 270 (349)
T 1jmx_B 191 GYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQI 270 (349)
T ss_dssp TBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEE
T ss_pred cccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEE
Confidence 11112222211000 000001122245444432 122233556788999999 99999
Q ss_pred EEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe
Q psy12697 420 ASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG 499 (602)
Q Consensus 420 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~ 499 (602)
+++ ++.|.+||+.+++.+..+... ..+.+++|+|+|++|++++
T Consensus 271 ~~~--~~~v~~~d~~~~~~~~~~~~~-----------------------------------~~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 271 YGV--LNRLAKYDLKQRKLIKAANLD-----------------------------------HTYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp EEE--ESEEEEEETTTTEEEEEEECS-----------------------------------SCCCEEEECSSSSCEEEES
T ss_pred EEE--cCeEEEEECccCeEEEEEcCC-----------------------------------CCccceEECCCCCEEEEec
Confidence 988 889999999988776655321 2345788888998888888
Q ss_pred CCCeEEEEeCCCCceeeeeccc
Q psy12697 500 VDKTTIIWDAASGQCEQQFSFH 521 (602)
Q Consensus 500 ~dg~i~iwd~~~~~~~~~~~~~ 521 (602)
.++.|.+||+.+++.+..+...
T Consensus 314 ~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 314 TFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp BSSEEEEEETTTTEEEEEEECS
T ss_pred CCCeEEEEeccccceeeeeecC
Confidence 8999999999999988877654
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=1.7e-22 Score=209.10 Aligned_cols=258 Identities=13% Similarity=0.107 Sum_probs=193.4
Q ss_pred CceeEEeeCCCCCeEEEEeC-CCeEEEEcCCCcceeeccccc-CCeEEEEEccCCCEEEEEec---CCcEEEEeCCC---
Q psy12697 281 KDVTSLDWNNNGSFLATGSY-DGYARIWTSDGSLKSTLGQHK-GPIFALKWNKRGNYILSAGV---DKTTIIWDAAS--- 352 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~---dg~i~~wd~~~--- 352 (602)
.+|.+++|+|||+.||+++. +|.+.+|++++.....+..+. ..+..+.|+|| +.+++++. +....+|.+..
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~ 100 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRP 100 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTST
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCC
Confidence 56999999999999999887 999999999877767776666 58999999999 77776664 45556654432
Q ss_pred CceeEEeeeccCCeeeeeccCC--CeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECC----C
Q psy12697 353 GQCEQQFSFHSAPALDVDWQSN--TSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDD----M 426 (602)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g 426 (602)
+... .+.... ......|+++ ..+++...++.+.+||+.+++.......+. .+++|+|||++|++++.+ +
T Consensus 101 g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 101 GEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp TCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEE
T ss_pred Cccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCe
Confidence 2222 222211 2224455555 455666666666699999887655444333 789999999999988877 7
Q ss_pred eEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCC--eE
Q psy12697 427 TLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDK--TT 504 (602)
Q Consensus 427 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg--~i 504 (602)
.|++||+.+++.. .+.. |...+..++|||||++|+++..++ .|
T Consensus 176 ~i~~~d~~~g~~~-~l~~----------------------------------~~~~~~~~~~SpDG~~l~~~~~~~~~~i 220 (582)
T 3o4h_A 176 SLFTSNLSSGGLR-VFDS----------------------------------GEGSFSSASISPGMKVTAGLETAREARL 220 (582)
T ss_dssp EEEEEETTTCCCE-EECC----------------------------------SSCEEEEEEECTTSCEEEEEECSSCEEE
T ss_pred EEEEEcCCCCCce-Eeec----------------------------------CCCccccceECCCCCEEEEccCCCeeEE
Confidence 8999999877643 3333 445567778888999999888888 89
Q ss_pred EEEeCCCCceeeeecccCCCeeEee--------ecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCC
Q psy12697 505 IIWDAASGQCEQQFSFHSAPALDVD--------WQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTG 575 (602)
Q Consensus 505 ~iwd~~~~~~~~~~~~~~~~v~~~~--------~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (602)
++||+.+++.. .+..|...+..++ |+||| .+++++.|+.+++|++ ++.... ..+
T Consensus 221 ~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~--------------~~~ 283 (582)
T 3o4h_A 221 VTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEA--------------PQG 283 (582)
T ss_dssp EEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECC--------------CSS
T ss_pred EEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeecc--------------CCC
Confidence 99999999887 7777888888888 99999 8899999999999998 443321 125
Q ss_pred cEEEEEECCCCCeEEEeccCCe
Q psy12697 576 GIFEVCWNSRGDKVGASASDGS 597 (602)
Q Consensus 576 ~i~~l~~spdg~~l~~~~~dg~ 597 (602)
.+.+++|+ ||+++++++.+..
T Consensus 284 ~v~~~~~s-dg~~l~~~s~~~~ 304 (582)
T 3o4h_A 284 NHGRVVLW-RGKLVTSHTSLST 304 (582)
T ss_dssp EEEEEEEE-TTEEEEEEEETTE
T ss_pred ceEEEEec-CCEEEEEEcCCCC
Confidence 58899999 9999998887754
No 154
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.90 E-value=7.1e-22 Score=209.81 Aligned_cols=354 Identities=11% Similarity=0.133 Sum_probs=215.4
Q ss_pred ceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCC
Q psy12697 142 PVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGH 221 (602)
Q Consensus 142 ~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h 221 (602)
...+++|+|||++|+++ |++|++||+.+++....+..+. ...+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~-----------------------------------~~~~ 60 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENST-----------------------------------FDEF 60 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTT-----------------------------------TTTC
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechh-----------------------------------hhhh
Confidence 35578999999999996 9999999999998764433210 0011
Q ss_pred CcceEEEEEcCCCCEEEEeeCC---------CcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCC
Q psy12697 222 ESEVFICAWNPVKDFLASGSGD---------STARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNG 292 (602)
Q Consensus 222 ~~~v~~~~~~~~~~~l~s~~~d---------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 292 (602)
......++|||||++|+.++.+ +.+.+||+.+++.... ..+...+...+|||||
T Consensus 61 ~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l-----------------~~~~~~~~~~~~SPdG 123 (740)
T 4a5s_A 61 GHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITE-----------------ERIPNNTQWVTWSPVG 123 (740)
T ss_dssp CSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-----------------SCCCTTEEEEEECSST
T ss_pred cccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEc-----------------ccCCCcceeeEECCCC
Confidence 1123457899999999998876 5567999988754321 1124578999999999
Q ss_pred CeEEEEeCCCeEEEEcCCCcceeecc--cccCCe-----------------EEEEEccCCCEEEEEecCCc-EEEEeCCC
Q psy12697 293 SFLATGSYDGYARIWTSDGSLKSTLG--QHKGPI-----------------FALKWNKRGNYILSAGVDKT-TIIWDAAS 352 (602)
Q Consensus 293 ~~l~~~~~dg~i~i~~~~~~~~~~~~--~~~~~i-----------------~~~~~~~~~~~l~~~~~dg~-i~~wd~~~ 352 (602)
+.||.+ .++.|++|+..+.....+. ++...+ ..+.|||||++|+.++.|.+ +.+|++..
T Consensus 124 ~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~ 202 (740)
T 4a5s_A 124 HKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSF 202 (740)
T ss_dssp TCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEE
T ss_pred CEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEe
Confidence 999988 4689999998754433332 232222 35899999999998876544 77776532
Q ss_pred CceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCC---Cc--eeeEec------cCCCCeEEEEECCCCCEEEE
Q psy12697 353 GQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHS---DK--PVKSFE------GHTNEVNAIKWDPQGLLLAS 421 (602)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~---~~--~~~~~~------~~~~~i~~~~~~~~~~~l~~ 421 (602)
..... .+......+.+...+.- .....|++||+.+ ++ ....+. +|...+..++|+|||+.++.
T Consensus 203 ~~~~~---~~~~~~~~~~yp~~G~~---~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~ 276 (740)
T 4a5s_A 203 YSDES---LQYPKTVRVPYPKAGAV---NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQ 276 (740)
T ss_dssp CCSTT---CSSCEEEEEECCBTTSC---CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEE
T ss_pred ecCCC---CCCCcceeecCCCCcCc---CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEE
Confidence 11100 11122333344333210 1123689999998 73 223333 37778999999999997766
Q ss_pred EEC----CCeEEEEeCCCCe----eeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCe-----EEEEE
Q psy12697 422 CSD----DMTLKIWSLDKDN----CVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPI-----FALKW 488 (602)
Q Consensus 422 ~~~----dg~i~iwd~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----~~i~~ 488 (602)
... +..|++||+.+++ +...... ....+...| ....|
T Consensus 277 ~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l------------------------------~~~~~~~~v~~~~~~~p~f 326 (740)
T 4a5s_A 277 WLRRIQNYSVMDICDYDESSGRWNCLVARQH------------------------------IEMSTTGWVGRFRPSEPHF 326 (740)
T ss_dssp EEESSTTEEEEEEEEEETTTTEEEECGGGCE------------------------------EEECSSSCSSSSSCCCCEE
T ss_pred EeCCCCCEEEEEEEECCCCccccceeEEEEe------------------------------eeccCCceEccCcCCCceE
Confidence 543 3479999998876 2211100 000122222 25679
Q ss_pred ccCCCEEE-EEeC-C--CeEEEEeCCCCceeeeecccCCCeeEeeecCCc-eE-EEeeC----CCcEEEeec--CCCCce
Q psy12697 489 NKRGNYIL-SAGV-D--KTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SF-ASCST----DQHIHVCKL--HSDKPV 556 (602)
Q Consensus 489 s~~~~~l~-s~~~-d--g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l-~~~~~----d~~i~iw~~--~~~~~~ 556 (602)
+|||+.|+ ..+. + ..|++||+.+++...... ....+..+.. +|+ .| +++.. .+...||.+ ..+...
T Consensus 327 spDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~-g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~ 404 (740)
T 4a5s_A 327 TLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITK-GTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKV 404 (740)
T ss_dssp CTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCC-SSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEE
T ss_pred cCCCCEEEEEEEcCCCceEEEEEECCCCceEeccc-CCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCcc
Confidence 99999877 6654 3 468999998776554443 3445555442 335 44 44433 234455543 322211
Q ss_pred eeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccC
Q psy12697 557 KSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASD 595 (602)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~d 595 (602)
..+.....+ .......+.|||||++++.....
T Consensus 405 ~~lt~~~~~-------~~~~~~~~~~S~dg~~~~~~~s~ 436 (740)
T 4a5s_A 405 TCLSCELNP-------ERCQYYSVSFSKEAKYYQLRCSG 436 (740)
T ss_dssp EESSTTTST-------TTBCBEEEEECTTSSEEEEEECS
T ss_pred eeeccccCC-------CCCceEEEEECCCCCEEEEEeCC
Confidence 111100000 12457889999999987655443
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=5.8e-20 Score=178.02 Aligned_cols=300 Identities=14% Similarity=0.115 Sum_probs=193.0
Q ss_pred ccceeeeec--ccceeeeeeeccCCceEEEEECCCCCeEEEeeCC----ceEEEEecCC--ceeEEEeeccCceEEEEeC
Q psy12697 119 RLTLPLWDV--ERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFD----KCVHIWSART--GQLVHSYKGTGGIFEVCWN 190 (602)
Q Consensus 119 ~~~i~vwd~--~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d----~~v~iwd~~~--~~~~~~~~~~~~~~~~~~~ 190 (602)
...|.+|++ ++++.......|...+..++|+|||++|++++.+ +.|.+|++.. |+....
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~------------- 92 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL------------- 92 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE-------------
T ss_pred CCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe-------------
Confidence 456788866 4565443333378888999999999999999876 7999998865 443211
Q ss_pred CCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEee-CCCcEEEEeCCCCCCCCCccceEEEEEE
Q psy12697 191 SRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGS-GDSTARIWDMTDSTKKDPKELQIVLRHC 269 (602)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~ 269 (602)
.....+......+++ ++++|++++ .++.|.+|++.......... ....+.
T Consensus 93 -------------------------~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~--~~~~~~ 143 (361)
T 3scy_A 93 -------------------------NTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPAS--DVIEFK 143 (361)
T ss_dssp -------------------------EEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCS--EEEECC
T ss_pred -------------------------eEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccc--eeEEcc
Confidence 122234455667777 787777766 58899999997654322111 111110
Q ss_pred ecCCCcccCCCCceeEEeeCCCCCeEEEEe-CCCeEEEEcCCCc--------c------eeecccccCCeEEEEEccCCC
Q psy12697 270 ISKGGTEVPSNKDVTSLDWNNNGSFLATGS-YDGYARIWTSDGS--------L------KSTLGQHKGPIFALKWNKRGN 334 (602)
Q Consensus 270 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~~~~~~--------~------~~~~~~~~~~i~~~~~~~~~~ 334 (602)
.............+.+++|+|+|+++++++ .++.|.+|+++.. + ......+...+..++|+|+|+
T Consensus 144 g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~ 223 (361)
T 3scy_A 144 GSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK 223 (361)
T ss_dssp CCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred CCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC
Confidence 000000111234568899999999776655 4789999986622 1 111223455678999999999
Q ss_pred EEEEEe-cCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEEC
Q psy12697 335 YILSAG-VDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWD 413 (602)
Q Consensus 335 ~l~~~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 413 (602)
++++++ .++.|.+||+.+++...... +.....+......++|+
T Consensus 224 ~l~v~~~~~~~v~v~~~~~g~~~~~~~------------------------------------~~~~~~~~~~~~~i~~s 267 (361)
T 3scy_A 224 FAYLINEIGGTVIAFRYADGMLDEIQT------------------------------------VAADTVNAQGSGDIHLS 267 (361)
T ss_dssp EEEEEETTTCEEEEEEEETTEEEEEEE------------------------------------EESCSSCCCCEEEEEEC
T ss_pred EEEEEcCCCCeEEEEEecCCceEEeEE------------------------------------EecCCCCCCCcccEEEC
Confidence 888777 58899999987654321110 01111223446789999
Q ss_pred CCCCEEEEEECC--CeEEEEeCC--CCee--eEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEE
Q psy12697 414 PQGLLLASCSDD--MTLKIWSLD--KDNC--VHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALK 487 (602)
Q Consensus 414 ~~~~~l~~~~~d--g~i~iwd~~--~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 487 (602)
|+|++|+++..+ +.|.+|++. +++. +..+.. ...+.+++
T Consensus 268 pdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-----------------------------------g~~~~~~~ 312 (361)
T 3scy_A 268 PDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-----------------------------------GIHPRNFI 312 (361)
T ss_dssp TTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-----------------------------------SSCCCEEE
T ss_pred CCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-----------------------------------CCCCceEE
Confidence 999998777665 899999986 3321 111111 23456788
Q ss_pred EccCCCEEEEEe-CCCeEEEE--eCCCCceeeee-cccCCCeeEeeec
Q psy12697 488 WNKRGNYILSAG-VDKTTIIW--DAASGQCEQQF-SFHSAPALDVDWQ 531 (602)
Q Consensus 488 ~s~~~~~l~s~~-~dg~i~iw--d~~~~~~~~~~-~~~~~~v~~~~~s 531 (602)
|+|||++|++++ .++.|.+| |..+++..... ..+...+.|+.|.
T Consensus 313 ~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 313 ITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp ECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred ECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 999999988887 57899995 55677766543 2345568888885
No 156
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=2.1e-21 Score=190.45 Aligned_cols=307 Identities=11% Similarity=-0.007 Sum_probs=200.5
Q ss_pred eeeeecccceeeeeeeccCCceEE-----EEECCCCCeEEEeeC-Cc--eEEEEecCCceeEEEeeccCceEEEEeCCCC
Q psy12697 122 LPLWDVERGECLNTLTRHTEPVYS-----VAFSPDGKFLASGSF-DK--CVHIWSARTGQLVHSYKGTGGIFEVCWNSRG 193 (602)
Q Consensus 122 i~vwd~~~~~~~~~l~~h~~~V~~-----~~~s~d~~~l~s~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (602)
...+|..++..+..+..|...... .+|||||++|+.++. ++ .|.+||+.+++.....
T Consensus 12 ~~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt--------------- 76 (388)
T 3pe7_A 12 DTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT--------------- 76 (388)
T ss_dssp EEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC---------------
T ss_pred eEEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee---------------
Confidence 345688889999999998877776 899999999999887 66 4888899888765322
Q ss_pred CCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCC
Q psy12697 194 TPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKG 273 (602)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 273 (602)
.++...+....|+||++.|+.++.++.|.+||+.+++... ...
T Consensus 77 -------------------------~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~------~~~------ 119 (388)
T 3pe7_A 77 -------------------------EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENV------VYQ------ 119 (388)
T ss_dssp -------------------------CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEE------EEE------
T ss_pred -------------------------eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCccee------eee------
Confidence 2344444457899999999999999999999998875321 100
Q ss_pred CcccCCCCceeEE--eeCCCCCeEEEE----------------------eCCCeEEEEcCCCcceeecccccCCeEEEEE
Q psy12697 274 GTEVPSNKDVTSL--DWNNNGSFLATG----------------------SYDGYARIWTSDGSLKSTLGQHKGPIFALKW 329 (602)
Q Consensus 274 ~~~~~~~~~i~~~--~~~~~~~~l~~~----------------------~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~ 329 (602)
.+...+... .++|++++++.. ..++.|.+||+.+.....+..+...+..+.|
T Consensus 120 ----~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 195 (388)
T 3pe7_A 120 ----VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIY 195 (388)
T ss_dssp ----CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEE
T ss_pred ----chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEE
Confidence 011223223 348999888743 2346799999886666666677778999999
Q ss_pred cc-CCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCC--CC
Q psy12697 330 NK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHT--NE 406 (602)
Q Consensus 330 ~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~--~~ 406 (602)
+| +|+.|+.+..++. + .....|.++|...++. ..+..+. ..
T Consensus 196 sp~dg~~l~~~~~~~~----~-------------------------------~~~~~l~~~d~~~~~~-~~l~~~~~~~~ 239 (388)
T 3pe7_A 196 RPYDDSTVAFCHEGPH----D-------------------------------LVDARMWLINEDGTNM-RKVKTHAEGES 239 (388)
T ss_dssp ETTEEEEEEEEECSCT----T-------------------------------TSSCSEEEEETTSCCC-EESCCCCTTEE
T ss_pred CCCCCCEEEEEEecCC----C-------------------------------CCcceEEEEeCCCCce-EEeeeCCCCcc
Confidence 99 9998887765320 0 0012233334333222 2222222 24
Q ss_pred eEEEEECCCCCEEEEEECC-----CeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccC
Q psy12697 407 VNAIKWDPQGLLLASCSDD-----MTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKG 481 (602)
Q Consensus 407 i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (602)
+...+|+|||+.|+..+.+ +.|++||+.+++....... .. .....+.++
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~-~~~~~~~~~------------------------ 293 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSM-PA-CSHLMSNYD------------------------ 293 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEE-CC-EEEEEECTT------------------------
T ss_pred cccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcC-CC-ceeeeecCC------------------------
Confidence 6778999999987665432 2499999998764322111 11 111112121
Q ss_pred CeEEEEEccCCCEEEEE---------eCCCeEEEEeCCCCceeeeecccCC-----------CeeEeeecCCc-eEEEee
Q psy12697 482 PIFALKWNKRGNYILSA---------GVDKTTIIWDAASGQCEQQFSFHSA-----------PALDVDWQSNT-SFASCS 540 (602)
Q Consensus 482 ~v~~i~~s~~~~~l~s~---------~~dg~i~iwd~~~~~~~~~~~~~~~-----------~v~~~~~s~~~-~l~~~~ 540 (602)
.+.|+|||++|+.. ..+..|++||+.+++. ..+..+.. .+.+++|+||| .|+..+
T Consensus 294 ---~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s 369 (388)
T 3pe7_A 294 ---GSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTS 369 (388)
T ss_dssp ---SSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred ---CCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEe
Confidence 12688999888754 4567899999998765 44444555 57889999999 666544
Q ss_pred -CCCcEEEeec
Q psy12697 541 -TDQHIHVCKL 550 (602)
Q Consensus 541 -~d~~i~iw~~ 550 (602)
.++...+|.+
T Consensus 370 ~~~g~~~l~~~ 380 (388)
T 3pe7_A 370 DVHGKPALYLA 380 (388)
T ss_dssp CTTSSCEEEEE
T ss_pred cCCCceeEEEE
Confidence 5677777764
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.90 E-value=6.9e-22 Score=210.14 Aligned_cols=320 Identities=15% Similarity=0.119 Sum_probs=217.3
Q ss_pred ccceeeeecccceeeeeeeccCC---ceEEEEECCCCCeEEEeeC---------CceEEEEecCCceeEEEeeccCceEE
Q psy12697 119 RLTLPLWDVERGECLNTLTRHTE---PVYSVAFSPDGKFLASGSF---------DKCVHIWSARTGQLVHSYKGTGGIFE 186 (602)
Q Consensus 119 ~~~i~vwd~~~~~~~~~l~~h~~---~V~~~~~s~d~~~l~s~~~---------d~~v~iwd~~~~~~~~~~~~~~~~~~ 186 (602)
+++|++||+.+++....+.+|.. .|.+++|||||++||+++. ++.|++||+.+++.+...+
T Consensus 35 d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~------- 107 (719)
T 1z68_A 35 DNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE------- 107 (719)
T ss_dssp TSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-------
T ss_pred CCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-------
Confidence 57899999999998888877765 4999999999999999876 7999999999887521000
Q ss_pred EEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEE
Q psy12697 187 VCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVL 266 (602)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~ 266 (602)
-...+..++|+|||+.|+++. ++.|++|++.++.........
T Consensus 108 ----------------------------------l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~--- 149 (719)
T 1z68_A 108 ----------------------------------LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNG--- 149 (719)
T ss_dssp ----------------------------------CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCC---
T ss_pred ----------------------------------cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCC---
Confidence 013477899999999999886 789999999876542110000
Q ss_pred EEEecCCCcccCCC---------CceeEEeeCCCCCeEEEEeCCC----------------------------------e
Q psy12697 267 RHCISKGGTEVPSN---------KDVTSLDWNNNGSFLATGSYDG----------------------------------Y 303 (602)
Q Consensus 267 ~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~l~~~~~dg----------------------------------~ 303 (602)
........+. ....+++|+|||+.|++++.|. .
T Consensus 150 ----~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~ 225 (719)
T 1z68_A 150 ----RENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVR 225 (719)
T ss_dssp ----BTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEE
T ss_pred ----CcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeE
Confidence 0000000011 1225899999999999987652 7
Q ss_pred EEEEcCCCcce---------eecccccCCeEEEEEccCCCEEEEEecC----CcEEEEe----CCCCceeEEe----eec
Q psy12697 304 ARIWTSDGSLK---------STLGQHKGPIFALKWNKRGNYILSAGVD----KTTIIWD----AASGQCEQQF----SFH 362 (602)
Q Consensus 304 i~i~~~~~~~~---------~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~~wd----~~~~~~~~~~----~~~ 362 (602)
|++||+.+... ..+..|...+..++|+||++.+++.... ..|.+|| +.++++...+ ..+
T Consensus 226 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~ 305 (719)
T 1z68_A 226 IFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESR 305 (719)
T ss_dssp EEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECS
T ss_pred EEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccC
Confidence 88999886543 1233577889999999998766664433 2488899 8877766555 345
Q ss_pred cCCee-----eeeccCCCe-EE--EeeCCC--eEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECC-----Ce
Q psy12697 363 SAPAL-----DVDWQSNTS-FA--SCSTDQ--HIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDD-----MT 427 (602)
Q Consensus 363 ~~~~~-----~~~~~~~~~-~~--~~~~~~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~ 427 (602)
...+. .+.|+|++. ++ +...+| .|++||+.+++ ...+..+...+..+.++ +++.|+..+.+ +.
T Consensus 306 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~ 383 (719)
T 1z68_A 306 TGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGR 383 (719)
T ss_dssp SSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTC
T ss_pred CceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCce
Confidence 55555 788999875 33 343455 57777877766 45566666678887777 88877777665 77
Q ss_pred EEEEeCCC--Ce-eeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE-eCC--
Q psy12697 428 LKIWSLDK--DN-CVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA-GVD-- 501 (602)
Q Consensus 428 i~iwd~~~--~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~-~~d-- 501 (602)
.++|.+.. +. ....+.. .+.++...+..+.|+|++++++.. +.+
T Consensus 384 ~~l~~~~~~~g~~~~~~l~~------------------------------~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~ 433 (719)
T 1z68_A 384 RNIYRISIGSYPPSKKCVTC------------------------------HLRKERCQYYTASFSDYAKYYALVCYGPGI 433 (719)
T ss_dssp BEEEEEECSSSSCCEEESST------------------------------TTTTTTBCBEEEEECGGGSSEEEEECCBSS
T ss_pred EEEEEEeCCCCCCCceeccC------------------------------ccCCCCCceEEEEECCCCCEEEEEcCCCCC
Confidence 88888653 21 1111110 011244556778888888877743 333
Q ss_pred CeEEEEeCCCCceeeeec
Q psy12697 502 KTTIIWDAASGQCEQQFS 519 (602)
Q Consensus 502 g~i~iwd~~~~~~~~~~~ 519 (602)
..+.+||+.+++++..+.
T Consensus 434 p~~~l~d~~~g~~~~~~~ 451 (719)
T 1z68_A 434 PISTLHDGRTDQEIKILE 451 (719)
T ss_dssp CEEEEECSSSCCEEEEEE
T ss_pred CeEEEEECCCCCEEEEee
Confidence 468999998888665544
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=2e-20 Score=180.22 Aligned_cols=275 Identities=11% Similarity=0.083 Sum_probs=184.9
Q ss_pred ceeeeec--ccceeee-eeeccCCceEEEEECCCCCeEEEeeC---CceEEEEecCCceeEEEeeccCceEEEEeCCCCC
Q psy12697 121 TLPLWDV--ERGECLN-TLTRHTEPVYSVAFSPDGKFLASGSF---DKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGT 194 (602)
Q Consensus 121 ~i~vwd~--~~~~~~~-~l~~h~~~V~~~~~s~d~~~l~s~~~---d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (602)
.|.+|++ ++++... ....+...+..++|+|||+ |++++. ++.|.+||+.+++....
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~----------------- 78 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKL----------------- 78 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEE-----------------
T ss_pred CEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEe-----------------
Confidence 4555554 5666544 3455677888999999999 555544 68999999977763211
Q ss_pred CCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEee-CCCcEEEEeCCCCCCCCCccceEEEEEEecCC
Q psy12697 195 PPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGS-GDSTARIWDMTDSTKKDPKELQIVLRHCISKG 273 (602)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 273 (602)
..+..+...+..++|+|++++|++++ .++.+.+|++...... ...........
T Consensus 79 ---------------------~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~-----~~~~~~~~~~~ 132 (347)
T 3hfq_A 79 ---------------------NTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGAL-----TLTDTVQHSGH 132 (347)
T ss_dssp ---------------------EEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCE-----EEEEEEECCCC
T ss_pred ---------------------eeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCe-----eecceeecCCC
Confidence 22234566788899999999888887 6899999999643221 11111100000
Q ss_pred C-cccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC--Cccee--eccc-ccCCeEEEEEccCCCEEEE-EecCCcEE
Q psy12697 274 G-TEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD--GSLKS--TLGQ-HKGPIFALKWNKRGNYILS-AGVDKTTI 346 (602)
Q Consensus 274 ~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~--~~~~~--~~~~-~~~~i~~~~~~~~~~~l~~-~~~dg~i~ 346 (602)
+ ........+.+++|+|+|+++++...++.|.+|++. +.... .+.. ....+..++|+|+|+++++ ...++.+.
T Consensus 133 ~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~ 212 (347)
T 3hfq_A 133 GPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIA 212 (347)
T ss_dssp CSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEE
Confidence 0 001123458899999999966666678899999987 32221 1112 2336788999999997766 45678999
Q ss_pred EEeCCC--CceeE--Eeeecc------CCeeeeeccCCCe-E-EEeeCCCeEEEEEcCC---CceeeEeccCCCCeEEEE
Q psy12697 347 IWDAAS--GQCEQ--QFSFHS------APALDVDWQSNTS-F-ASCSTDQHIHVCKLHS---DKPVKSFEGHTNEVNAIK 411 (602)
Q Consensus 347 ~wd~~~--~~~~~--~~~~~~------~~~~~~~~~~~~~-~-~~~~~~~~i~i~d~~~---~~~~~~~~~~~~~i~~~~ 411 (602)
+|++.. ++... .+.... ..+..++|+|++. + ++...++.|.+|++.. .+.+..+..+...+..++
T Consensus 213 v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 292 (347)
T 3hfq_A 213 SLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFD 292 (347)
T ss_dssp EEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEE
T ss_pred EEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEE
Confidence 998874 54322 222222 3477899999976 3 4555689999999973 245556666667789999
Q ss_pred ECCCCCEEEEEECC-CeEEEE--eCCCCeee
Q psy12697 412 WDPQGLLLASCSDD-MTLKIW--SLDKDNCV 439 (602)
Q Consensus 412 ~~~~~~~l~~~~~d-g~i~iw--d~~~~~~~ 439 (602)
|+|+|++|++++.+ +.|.+| |..+++..
T Consensus 293 ~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 293 LDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred ECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 99999999888765 899999 54555543
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.88 E-value=3.5e-20 Score=178.84 Aligned_cols=270 Identities=9% Similarity=0.012 Sum_probs=189.8
Q ss_pred EEeeCCCCCeEEEEeCCCeEEEEcCCC-cceeeccccc-CCeEEEEEccCCCEEE-EEecCCcEEEEeCCCCceeEEeee
Q psy12697 285 SLDWNNNGSFLATGSYDGYARIWTSDG-SLKSTLGQHK-GPIFALKWNKRGNYIL-SAGVDKTTIIWDAASGQCEQQFSF 361 (602)
Q Consensus 285 ~~~~~~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~-~~i~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~ 361 (602)
.+++++++.++++++.++.|.+||... +....+..+. ..+..++|+|++++++ +...++.|.+||+.+++....+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 456788899999999999999999874 4444444332 2578999999998765 445689999999999988877664
Q ss_pred cc------CCeeeeeccCCCe-EEEeeCC------------CeEEEEEcCCCce---eeEeccCCCCeEEEEECCCCCEE
Q psy12697 362 HS------APALDVDWQSNTS-FASCSTD------------QHIHVCKLHSDKP---VKSFEGHTNEVNAIKWDPQGLLL 419 (602)
Q Consensus 362 ~~------~~~~~~~~~~~~~-~~~~~~~------------~~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l 419 (602)
.. ..+..+.|+|++. ++++..+ +.|.+||+.+++. +..+. +...+.+++|+|+|+ +
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-L 161 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-E
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-E
Confidence 33 2367889999864 5555544 8999999988543 33333 334688999999999 5
Q ss_pred EEEECCCeEEEEeCCCCeeeEeeccccc------------------------cEEEEEECCCCCCCCCCCcceeeee---
Q psy12697 420 ASCSDDMTLKIWSLDKDNCVHDLQAHNK------------------------EIYTIKWSPTGPETSNPNMSLIFIL--- 472 (602)
Q Consensus 420 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~------------------------~i~~~~~~~~~~~~~~~~~~~~~~~--- 472 (602)
++++. .|.+||+.+++.+..+..... ....+++++++..............
T Consensus 162 ~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 239 (349)
T 1jmx_B 162 YVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 239 (349)
T ss_dssp EEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred EEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEe
Confidence 55543 499999999887776653320 2344566654422111100000000
Q ss_pred -------eeccCCccCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCC
Q psy12697 473 -------KSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQ 543 (602)
Q Consensus 473 -------~~~~~~~~~~v~~i~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~ 543 (602)
......+...+..++|+| +|++++++ ++.|.+||+.+++.+..+.. ...+.+++|+|++ .|++++.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~ 316 (349)
T 1jmx_B 240 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFN 316 (349)
T ss_dssp TTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSS
T ss_pred ccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCC
Confidence 011122445778999999 99999988 88999999999998877763 3457899999999 888888899
Q ss_pred cEEEeecCCCCceeeeec
Q psy12697 544 HIHVCKLHSDKPVKSFEG 561 (602)
Q Consensus 544 ~i~iw~~~~~~~~~~~~~ 561 (602)
.|++||+.+++.+..++.
T Consensus 317 ~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 317 DLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred eEEEEeccccceeeeeec
Confidence 999999988877666543
No 160
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=9.2e-20 Score=175.60 Aligned_cols=248 Identities=14% Similarity=0.128 Sum_probs=168.8
Q ss_pred CceeEEeeCCCCCeEEEEeC---CCeEEEEcCCCcc---eeecccccCCeEEEEEccCCCEEEEEe-cCCcEEEEeCCC-
Q psy12697 281 KDVTSLDWNNNGSFLATGSY---DGYARIWTSDGSL---KSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAAS- 352 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~---dg~i~i~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~wd~~~- 352 (602)
..+..++|+|+|+ +++++. ++.|.+|++.+.. ...+..+...+..++|+|+|++|++++ .++.+.+|++..
T Consensus 40 ~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~ 118 (347)
T 3hfq_A 40 QNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAAD 118 (347)
T ss_dssp SCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTT
T ss_pred CCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCC
Confidence 5578899999999 555544 6899999986433 233344677888999999999998887 678999999963
Q ss_pred Cce--eEEeeec---------cCCeeeeeccCCCeEEEe-eCCCeEEEEEcC-CCcee--eEeccC-CCCeEEEEECCCC
Q psy12697 353 GQC--EQQFSFH---------SAPALDVDWQSNTSFASC-STDQHIHVCKLH-SDKPV--KSFEGH-TNEVNAIKWDPQG 416 (602)
Q Consensus 353 ~~~--~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~i~i~d~~-~~~~~--~~~~~~-~~~i~~~~~~~~~ 416 (602)
+.. +..+... ...+..++|+|++.++++ ..++.|.+|++. +++.. ..+..+ ...+..++|+|+|
T Consensus 119 g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg 198 (347)
T 3hfq_A 119 GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDG 198 (347)
T ss_dssp SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTS
T ss_pred CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCC
Confidence 332 2222211 123677999998765544 457889999998 44432 222222 3367889999999
Q ss_pred CEEEEE-ECCCeEEEEeCCC--CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCC
Q psy12697 417 LLLASC-SDDMTLKIWSLDK--DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGN 493 (602)
Q Consensus 417 ~~l~~~-~~dg~i~iwd~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~ 493 (602)
++|+++ ..++.|.+|++.. ++.... ..+...+.+ ......+..++|+|||+
T Consensus 199 ~~l~v~~~~~~~v~v~~~~~~~g~~~~~--------~~~~~~~~~------------------~~~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 199 QYAFLAGELSSQIASLKYDTQTGAFTQL--------GIVKTIPAD------------------YTAHNGAAAIRLSHDGH 252 (347)
T ss_dssp SEEEEEETTTTEEEEEEEETTTTEEEEE--------EEEESSCTT------------------CCSCCEEEEEEECTTSC
T ss_pred CEEEEEeCCCCEEEEEEecCCCCceEEe--------eeeeecCCC------------------CCCCCcceeEEECCCCC
Confidence 966664 5678999999874 332111 011111100 01124578899999999
Q ss_pred EEE-EEeCCCeEEEEeCCC-C--ceeeeecccCCCeeEeeecCCc-eEEEeeC-CCcEEEeec--CCCCc
Q psy12697 494 YIL-SAGVDKTTIIWDAAS-G--QCEQQFSFHSAPALDVDWQSNT-SFASCST-DQHIHVCKL--HSDKP 555 (602)
Q Consensus 494 ~l~-s~~~dg~i~iwd~~~-~--~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~-d~~i~iw~~--~~~~~ 555 (602)
+|+ +...++.|.+||+.. + +.+..+..+...+..++|+||| +|++++. ++.|.+|++ .+++.
T Consensus 253 ~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 253 FLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp EEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 874 556689999999973 2 4555666666678999999999 7777765 489999954 44543
No 161
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=2.9e-21 Score=190.39 Aligned_cols=207 Identities=15% Similarity=0.183 Sum_probs=150.5
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCCC-----------ccee-----ecccccCCeEEEEEccCCCEEE----EEe
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSDG-----------SLKS-----TLGQHKGPIFALKWNKRGNYIL----SAG 340 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~-----------~~~~-----~~~~~~~~i~~~~~~~~~~~l~----~~~ 340 (602)
..++.+++++++.++++++.++ +++|+... .... ....+...|.+++|+|++++|+ +++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 4578999999999999999888 88876321 0011 1123556799999999999999 778
Q ss_pred cCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCC-CCEE
Q psy12697 341 VDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQ-GLLL 419 (602)
Q Consensus 341 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l 419 (602)
.|+.|++||+.++... ..... +....+..+.+|...|.+++|+|+ +.+|
T Consensus 116 ~d~~v~iwd~~~~~~~-----~~~~~-------------------------~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNE-----AKQQK-------------------------RPFAYHKLLKDAGGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp TEEEEEEEEHHHHHCT-----TCSSC-------------------------CCSEEEECCCSGGGSEEEEEECSSCTTEE
T ss_pred CCceEEEEEccccccC-----CcCCc-------------------------ceeeeeeccCCCCCceEEEEECCCCCCEE
Confidence 8999999998653100 00000 000113445678899999999997 8999
Q ss_pred EEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe
Q psy12697 420 ASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG 499 (602)
Q Consensus 420 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~ 499 (602)
++++.||+|++||++++..+..... |...|.+++|+|+|++|++|+
T Consensus 166 as~s~Dg~v~iwD~~~~~~~~~~~~----------------------------------~~~~v~~v~wspdg~~lasgs 211 (434)
T 2oit_A 166 AVCLADGSIAVLQVTETVKVCATLP----------------------------------STVAVTSVCWSPKGKQLAVGK 211 (434)
T ss_dssp EEEETTSCEEEEEESSSEEEEEEEC----------------------------------GGGCEEEEEECTTSSCEEEEE
T ss_pred EEEECCCeEEEEEcCCCcceeeccC----------------------------------CCCceeEEEEcCCCCEEEEEc
Confidence 9999999999999998755433332 556677788888999999999
Q ss_pred CCCeEEEEeCCCCceeeeeccc-------CCCeeEeeecCCc-eEE-EeeCCC------cEEEeecCCC
Q psy12697 500 VDKTTIIWDAASGQCEQQFSFH-------SAPALDVDWQSNT-SFA-SCSTDQ------HIHVCKLHSD 553 (602)
Q Consensus 500 ~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~s~~~-~l~-~~~~d~------~i~iw~~~~~ 553 (602)
.||.|++||++ ++....+..| ...|.+++|++++ +++ +...|| .+++|++...
T Consensus 212 ~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 212 QNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 99999999998 6655555443 2379999999998 443 344443 3899999865
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=5.6e-19 Score=171.09 Aligned_cols=293 Identities=9% Similarity=0.009 Sum_probs=188.3
Q ss_pred CEEEEee----CCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCC----CeEEE
Q psy12697 235 DFLASGS----GDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYD----GYARI 306 (602)
Q Consensus 235 ~~l~s~~----~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i 306 (602)
.+++.|+ .++.|.+|+++..... ....... +...+..++|+|+|++|++++.+ +.|.+
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~----~~~~~~~----------~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~ 79 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGE----SLPLSDA----------EVANPSYLIPSADGKFVYSVNEFSKDQAAVSA 79 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCC----EEEEEEE----------ECSCCCSEEECTTSSEEEEEECCSSTTCEEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCC----EEEeecc----------cCCCCceEEECCCCCEEEEEEccCCCCCcEEE
Confidence 3455553 4678999987543221 1111100 14567889999999999998886 79999
Q ss_pred EcCCC---cc--eeecccccCCeEEEEEccCCCEEEEEe-cCCcEEEEeCCCCceeEEe----ee----------ccCCe
Q psy12697 307 WTSDG---SL--KSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAASGQCEQQF----SF----------HSAPA 366 (602)
Q Consensus 307 ~~~~~---~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~----~~----------~~~~~ 366 (602)
|+++. .. +.....+......+++ ++++|++++ .++.+.+|++.....+... .. ....+
T Consensus 80 ~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~ 157 (361)
T 3scy_A 80 FAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHL 157 (361)
T ss_dssp EEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCE
T ss_pred EEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcc
Confidence 98653 22 2223334556777887 788887776 5789999999754332211 11 11234
Q ss_pred eeeeccCCCe-EEEee-CCCeEEEEEcCCCce------e-------eEeccCCCCeEEEEECCCCCEEEEEE-CCCeEEE
Q psy12697 367 LDVDWQSNTS-FASCS-TDQHIHVCKLHSDKP------V-------KSFEGHTNEVNAIKWDPQGLLLASCS-DDMTLKI 430 (602)
Q Consensus 367 ~~~~~~~~~~-~~~~~-~~~~i~i~d~~~~~~------~-------~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i 430 (602)
.+++|+|++. ++++. .++.|.+|++..... + .....+...+..++|+|+|+++++++ .++.|.+
T Consensus 158 ~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 237 (361)
T 3scy_A 158 HCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIA 237 (361)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEE
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEE
Confidence 6789999975 44444 578999999875431 1 11223455688999999999888877 5899999
Q ss_pred EeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCC--CeEEEEe
Q psy12697 431 WSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVD--KTTIIWD 508 (602)
Q Consensus 431 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d--g~i~iwd 508 (602)
|++.+++..... .+. ....+......++|+|||++|+++..+ +.|.+|+
T Consensus 238 ~~~~~g~~~~~~--------~~~---------------------~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 238 FRYADGMLDEIQ--------TVA---------------------ADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp EEEETTEEEEEE--------EEE---------------------SCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred EEecCCceEEeE--------EEe---------------------cCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 999866432111 011 011123445789999999998776654 8999999
Q ss_pred CC--CCc--eeeeecccCCCeeEeeecCCc-eEEEee-CCCcEEEeecC--CCCceeeeecccccceEEEEecCCcEEEE
Q psy12697 509 AA--SGQ--CEQQFSFHSAPALDVDWQSNT-SFASCS-TDQHIHVCKLH--SDKPVKSFEGHTTGQLVHSYKGTGGIFEV 580 (602)
Q Consensus 509 ~~--~~~--~~~~~~~~~~~v~~~~~s~~~-~l~~~~-~d~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 580 (602)
+. +++ .+..+.. ...+..++|+||| +|++++ .++.|.+|+++ +++........ ....+.++
T Consensus 289 ~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~----------~~~~p~~v 357 (361)
T 3scy_A 289 VDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDI----------KVDKPVCL 357 (361)
T ss_dssp ECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCE----------ECSSEEEE
T ss_pred EcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceee----------eCCCCeEE
Confidence 85 455 3444444 4568899999999 777776 67899996554 44433221111 12457788
Q ss_pred EEC
Q psy12697 581 CWN 583 (602)
Q Consensus 581 ~~s 583 (602)
.|.
T Consensus 358 ~~~ 360 (361)
T 3scy_A 358 KFV 360 (361)
T ss_dssp EEE
T ss_pred EEc
Confidence 875
No 163
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=5e-20 Score=181.62 Aligned_cols=264 Identities=14% Similarity=0.130 Sum_probs=172.8
Q ss_pred cCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEe
Q psy12697 139 HTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKL 218 (602)
Q Consensus 139 h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 218 (602)
+...++.+++++++.++++++.|+ ++||+.......... . ..............
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~--~-----------------------~~~~~~~~~~~~~~ 88 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKP--G-----------------------DDPNKIVDKVQGLL 88 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCT--T-----------------------CCTTCEEECCCCEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhccc--c-----------------------cCcccccccCcccc
Confidence 345688999999999999999988 899886432110000 0 00000000001122
Q ss_pred eCCCcceEEEEEcCCCCEEE----EeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCC-CC
Q psy12697 219 IGHESEVFICAWNPVKDFLA----SGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNN-GS 293 (602)
Q Consensus 219 ~~h~~~v~~~~~~~~~~~l~----s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~ 293 (602)
..+...|.+++|+|++++|+ +++.|+.|++||+.+............... .....|...|.+++|+|+ +.
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~-----~~~~~h~~~V~~v~~~p~~~~ 163 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYH-----KLLKDAGGMVIDMKWNPTVPS 163 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEE-----ECCCSGGGSEEEEEECSSCTT
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeee-----eccCCCCCceEEEEECCCCCC
Confidence 34678899999999999999 788999999999875411000000000000 011235678999999997 88
Q ss_pred eEEEEeCCCeEEEEcCCCc-ceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeecc-------CC
Q psy12697 294 FLATGSYDGYARIWTSDGS-LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS-------AP 365 (602)
Q Consensus 294 ~l~~~~~dg~i~i~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-------~~ 365 (602)
+|++++.||.|++||++.. .......|...|.+++|+|+|++|++++.||.|++||++ ++....+..+. ..
T Consensus 164 ~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~ 242 (434)
T 2oit_A 164 MVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVR 242 (434)
T ss_dssp EEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEE
T ss_pred EEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCcee
Confidence 9999999999999998743 334455688999999999999999999999999999998 55555554332 27
Q ss_pred eeeeeccCCCeEEEee--CCC------eEEEEEcCCCce-----eeEec-------cCCCCeEEEEECCCCCEEEEEEC-
Q psy12697 366 ALDVDWQSNTSFASCS--TDQ------HIHVCKLHSDKP-----VKSFE-------GHTNEVNAIKWDPQGLLLASCSD- 424 (602)
Q Consensus 366 ~~~~~~~~~~~~~~~~--~~~------~i~i~d~~~~~~-----~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~- 424 (602)
+.++.|+++..++++. .+| .+++|++...+. ...+. +....-..+.+-++.+++++++.
T Consensus 243 v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~ 322 (434)
T 2oit_A 243 VLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAA 322 (434)
T ss_dssp EEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETT
T ss_pred EEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCC
Confidence 8899999998877443 232 389999976521 11111 11222223334466677666654
Q ss_pred CCeEEEEeCC
Q psy12697 425 DMTLKIWSLD 434 (602)
Q Consensus 425 dg~i~iwd~~ 434 (602)
.+.|.+....
T Consensus 323 s~dv~vl~~~ 332 (434)
T 2oit_A 323 STEVSILARQ 332 (434)
T ss_dssp CSBCEEEEEC
T ss_pred CCceeEEEec
Confidence 4456666643
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.86 E-value=8.9e-20 Score=193.71 Aligned_cols=351 Identities=13% Similarity=0.134 Sum_probs=221.6
Q ss_pred ccceeeeecccceeeeeeeccCCce-----EEEEECCCCCeEEEeeCC---------ceEEEEecCCceeEEEeeccCce
Q psy12697 119 RLTLPLWDVERGECLNTLTRHTEPV-----YSVAFSPDGKFLASGSFD---------KCVHIWSARTGQLVHSYKGTGGI 184 (602)
Q Consensus 119 ~~~i~vwd~~~~~~~~~l~~h~~~V-----~~~~~s~d~~~l~s~~~d---------~~v~iwd~~~~~~~~~~~~~~~~ 184 (602)
+++|++||+.++++...+.+|.... ..++|||||++|+.++.+ +.+.+||+.+++..
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~--------- 105 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------- 105 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC---------
T ss_pred CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE---------
Confidence 5789999999999988888887532 347889999999999876 56679999998753
Q ss_pred EEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceE
Q psy12697 185 FEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQI 264 (602)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~ 264 (602)
.+..|...+...+|||||+.||.+. ++.|.+|++.++.........
T Consensus 106 --------------------------------~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g- 151 (740)
T 4a5s_A 106 --------------------------------TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTG- 151 (740)
T ss_dssp --------------------------------CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCC-
T ss_pred --------------------------------EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCC-
Confidence 2345677899999999999999884 689999999876532110000
Q ss_pred EEEEEecCCCcccCCC---------CceeEEeeCCCCCeEEEEeCCC-eEEEEcCCCcceeecccccCCeEEEEEccCCC
Q psy12697 265 VLRHCISKGGTEVPSN---------KDVTSLDWNNNGSFLATGSYDG-YARIWTSDGSLKSTLGQHKGPIFALKWNKRGN 334 (602)
Q Consensus 265 ~~~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~l~~~~~dg-~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 334 (602)
........+. .....+.|||||+.||.+..|. .+.+|++...... ..+...+..+.+.+.|.
T Consensus 152 ------~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~--~~~~~~~~~~~yp~~G~ 223 (740)
T 4a5s_A 152 ------KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE--SLQYPKTVRVPYPKAGA 223 (740)
T ss_dssp ------BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCST--TCSSCEEEEEECCBTTS
T ss_pred ------CccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCC--CCCCCcceeecCCCCcC
Confidence 0000000000 2234689999999999887654 4777764310000 02445567788877765
Q ss_pred EEEEEecCCcEEEEeCCC---Cc--eeEEeee------ccCCeeeeeccCCCeEEE-eeC----CCeEEEEEcCCCc---
Q psy12697 335 YILSAGVDKTTIIWDAAS---GQ--CEQQFSF------HSAPALDVDWQSNTSFAS-CST----DQHIHVCKLHSDK--- 395 (602)
Q Consensus 335 ~l~~~~~dg~i~~wd~~~---~~--~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~----~~~i~i~d~~~~~--- 395 (602)
. .....|.+||+.+ ++ ....+.. +...+..+.|+|++.+++ ... +..|.+||+.+++
T Consensus 224 ~----~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~ 299 (740)
T 4a5s_A 224 V----NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRW 299 (740)
T ss_dssp C----CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEE
T ss_pred c----CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccc
Confidence 3 1223689999998 73 2223332 556688899999988433 322 2379999999887
Q ss_pred -e--eeEe--ccCCCCeE-----EEEECCCCCEEE-EEEC-C--CeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCC
Q psy12697 396 -P--VKSF--EGHTNEVN-----AIKWDPQGLLLA-SCSD-D--MTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPET 461 (602)
Q Consensus 396 -~--~~~~--~~~~~~i~-----~~~~~~~~~~l~-~~~~-d--g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 461 (602)
+ +..+ .+|...+. ...|+|||+.|+ ..+. + ..|.+||+.+++.. .+......+
T Consensus 300 ~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v------------ 366 (740)
T 4a5s_A 300 NCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEV------------ 366 (740)
T ss_dssp EECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCE------------
T ss_pred ceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEE------------
Confidence 2 2222 44555444 788999999887 6664 3 46888888765443 222222222
Q ss_pred CCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCC-------CeEEEEeCCCCceeeeecc----cCCCeeEeee
Q psy12697 462 SNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVD-------KTTIIWDAASGQCEQQFSF----HSAPALDVDW 530 (602)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~----~~~~v~~~~~ 530 (602)
..+. .+|++.|+..+.. ..|+..++..+.....+.. .......+.|
T Consensus 367 ----------------------~~~~-~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~ 423 (740)
T 4a5s_A 367 ----------------------IGIE-ALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSF 423 (740)
T ss_dssp ----------------------EEEE-EECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEE
T ss_pred ----------------------EEEE-EEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEE
Confidence 2221 1234544433332 3455566665543323331 2356888999
Q ss_pred cCCc-eEEEee-C--CCcEEEeecCCCCceeeee
Q psy12697 531 QSNT-SFASCS-T--DQHIHVCKLHSDKPVKSFE 560 (602)
Q Consensus 531 s~~~-~l~~~~-~--d~~i~iw~~~~~~~~~~~~ 560 (602)
||++ .++... . -..+.+++..+++.+..+.
T Consensus 424 S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~~l~ 457 (740)
T 4a5s_A 424 SKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLE 457 (740)
T ss_dssp CTTSSEEEEEECSBSSCEEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEEeCCCCCCEEEEEECCCCcEEEEec
Confidence 9999 544332 2 2468888888776655543
No 165
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.85 E-value=6.1e-19 Score=169.67 Aligned_cols=283 Identities=12% Similarity=0.110 Sum_probs=198.7
Q ss_pred ccceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEee----------CCceEEEEecCCceeEEEeeccCceEEEE
Q psy12697 119 RLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGS----------FDKCVHIWSARTGQLVHSYKGTGGIFEVC 188 (602)
Q Consensus 119 ~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 188 (602)
++.|.+||..+++.+.++..+..+ .++|+|||++|++++ .+++|.+||..+++.+..+.....
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~----- 102 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK----- 102 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT-----
T ss_pred cCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc-----
Confidence 568999999999999999887776 899999999999886 367899999999988876542110
Q ss_pred eCCCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeC--CCcEEEEeCCCCCCCCCccceEEE
Q psy12697 189 WNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSG--DSTARIWDMTDSTKKDPKELQIVL 266 (602)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~--dg~i~iw~~~~~~~~~~~~~~~~~ 266 (602)
...+......++|+|++++|+++.. ++.|.+||+.+++....
T Consensus 103 -----------------------------~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~------- 146 (361)
T 2oiz_A 103 -----------------------------RVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED------- 146 (361)
T ss_dssp -----------------------------BCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE-------
T ss_pred -----------------------------ccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE-------
Confidence 0012234567899999999998864 68999999987643211
Q ss_pred EEEecCCCcccCCCCceeEEeeCCCC-CeEEEEeCCCeEEEEcCC--Ccce------eecccccCCeEEEEEccCCCEEE
Q psy12697 267 RHCISKGGTEVPSNKDVTSLDWNNNG-SFLATGSYDGYARIWTSD--GSLK------STLGQHKGPIFALKWNKRGNYIL 337 (602)
Q Consensus 267 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~~~~--~~~~------~~~~~~~~~i~~~~~~~~~~~l~ 337 (602)
.+ +. .....+.+.|++ ..+++.+.||.+.+|+.. ++.. ..+.....++ .+.+++++..++
T Consensus 147 --~i-------~~-~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 215 (361)
T 2oiz_A 147 --VT-------AA-AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAH 215 (361)
T ss_dssp --EG-------GG-TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEE
T ss_pred --Ee-------cC-CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEE
Confidence 00 00 112224566655 567788888988888764 3322 1122222222 334467788888
Q ss_pred EEecCCcEEEEeCCCCcee--EEeeecc----------CCeeeeeccCC-CeEEEeeC-----------CCeEEEEEcCC
Q psy12697 338 SAGVDKTTIIWDAASGQCE--QQFSFHS----------APALDVDWQSN-TSFASCST-----------DQHIHVCKLHS 393 (602)
Q Consensus 338 ~~~~dg~i~~wd~~~~~~~--~~~~~~~----------~~~~~~~~~~~-~~~~~~~~-----------~~~i~i~d~~~ 393 (602)
..+.++.+.++|+...... ..+.... .....++++++ +.++++.. .+.|.+||+.+
T Consensus 216 ~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t 295 (361)
T 2oiz_A 216 FVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT 295 (361)
T ss_dssp EEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT
T ss_pred EEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC
Confidence 8888999999998755422 2221110 11122567776 44444432 35899999999
Q ss_pred CceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCC--eeeEeeccccccEEEEEECCCC
Q psy12697 394 DKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKD--NCVHDLQAHNKEIYTIKWSPTG 458 (602)
Q Consensus 394 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~i~~~~~~~~~ 458 (602)
++.+..+..+. +.+++|+|+|++|++++. +.|.+||..++ +.+.++.........+.++|++
T Consensus 296 ~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 296 KQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp TEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred CcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 99999998877 999999999999998887 99999999999 8888876666666777777765
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.85 E-value=2.9e-20 Score=182.82 Aligned_cols=311 Identities=14% Similarity=0.121 Sum_probs=206.0
Q ss_pred eeeecccceeeeeeeccCCc-----eEEEEECCCCCeEEEeeCC---ceEEEEecCCceeEEEeeccCceEEEEeCCCCC
Q psy12697 123 PLWDVERGECLNTLTRHTEP-----VYSVAFSPDGKFLASGSFD---KCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGT 194 (602)
Q Consensus 123 ~vwd~~~~~~~~~l~~h~~~-----V~~~~~s~d~~~l~s~~~d---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (602)
..+|..+++.+..+..+... +.+++|||||++|+....+ ..|.+||+.+++......
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~--------------- 77 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE--------------- 77 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC---------------
T ss_pred eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec---------------
Confidence 45588899888888776544 7889999999998877543 478888998877542111
Q ss_pred CCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCC
Q psy12697 195 PPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGG 274 (602)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (602)
++......+.|+|+++.|+.++.++.|.+|++.+++.. .....
T Consensus 78 -------------------------~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~------~~~~~------ 120 (396)
T 3c5m_A 78 -------------------------GKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQ------VIYTV------ 120 (396)
T ss_dssp -------------------------SSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEE------EEEEC------
T ss_pred -------------------------CCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcE------EEEec------
Confidence 11112223689999999999999999999998776421 01000
Q ss_pred cccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEE-----ecCCcEEEEe
Q psy12697 275 TEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSA-----GVDKTTIIWD 349 (602)
Q Consensus 275 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-----~~dg~i~~wd 349 (602)
.. .|+++|+.|+....++...+|. ..+.|+|+++.++.. ..+..|.+||
T Consensus 121 -----~~-----~~~~~g~~l~~~~~~~~~~~~~----------------~~~~~spdg~~~~~~~~~~~~~~~~l~~~d 174 (396)
T 3c5m_A 121 -----DE-----EWKGYGTWVANSDCTKLVGIEI----------------LKRDWQPLTSWEKFAEFYHTNPTCRLIKVD 174 (396)
T ss_dssp -----CT-----TEEEEEEEEECTTSSEEEEEEE----------------EGGGCCCCCSHHHHHHHHHTCCCEEEEEEE
T ss_pred -----cc-----ccCCCCCEEEeccCCccccccc----------------cccccCCCCcceeeeeeccCCCcceEEEEE
Confidence 01 1666777777666655544442 124578888877654 3567899999
Q ss_pred CCCCceeEEeeeccCCeeeeeccC-CCe-EEEeeCC------CeEEEEEcCCCceeeEeccC-CCCeEEEEECCCCCEEE
Q psy12697 350 AASGQCEQQFSFHSAPALDVDWQS-NTS-FASCSTD------QHIHVCKLHSDKPVKSFEGH-TNEVNAIKWDPQGLLLA 420 (602)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~------~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~ 420 (602)
+.+++..... .+...+..+.|+| ++. ++..+.+ ..|.+||+..++........ ...+..++|+|+|++|+
T Consensus 175 ~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~ 253 (396)
T 3c5m_A 175 IETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMA 253 (396)
T ss_dssp TTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEE
T ss_pred CCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEE
Confidence 9988765444 4566788899999 544 5555443 46889998766543322211 23578899999999888
Q ss_pred EEECC-----CeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEcc-CCCE
Q psy12697 421 SCSDD-----MTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNK-RGNY 494 (602)
Q Consensus 421 ~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~-~~~~ 494 (602)
.++.+ +.|++||+.+++........ ... +.|+| ||++
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~------------------------------------~~~-~~~s~~dg~~ 296 (396)
T 3c5m_A 254 YVSYFKGQTDRVIYKANPETLENEEVMVMP------------------------------------PCS-HLMSNFDGSL 296 (396)
T ss_dssp EEEEETTTCCEEEEEECTTTCCEEEEEECC------------------------------------SEE-EEEECSSSSE
T ss_pred EEecCCCCccceEEEEECCCCCeEEeeeCC------------------------------------CCC-CCccCCCCce
Confidence 77654 45999999876543211100 011 67888 8888
Q ss_pred EEEEe----------------CCCeEEEEeCCCCceeeeecccCC-----------CeeEeeecCCc-eEEEeeC-CCcE
Q psy12697 495 ILSAG----------------VDKTTIIWDAASGQCEQQFSFHSA-----------PALDVDWQSNT-SFASCST-DQHI 545 (602)
Q Consensus 495 l~s~~----------------~dg~i~iwd~~~~~~~~~~~~~~~-----------~v~~~~~s~~~-~l~~~~~-d~~i 545 (602)
+++++ .++.|++||+.+++.. .+..+.. .+..++|+||| .|+.++. ++..
T Consensus 297 l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~ 375 (396)
T 3c5m_A 297 MVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVP 375 (396)
T ss_dssp EEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSC
T ss_pred EEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCc
Confidence 88754 3478999999887754 3444443 25678999999 6766554 5555
Q ss_pred EEeec
Q psy12697 546 HVCKL 550 (602)
Q Consensus 546 ~iw~~ 550 (602)
.+|.+
T Consensus 376 ~l~~~ 380 (396)
T 3c5m_A 376 AIYIA 380 (396)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 55544
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.85 E-value=1.8e-19 Score=176.58 Aligned_cols=280 Identities=10% Similarity=0.041 Sum_probs=180.9
Q ss_pred EEeeCCCCCeEEEEeC-CC--eEEEEcCCCcceeec-ccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEee
Q psy12697 285 SLDWNNNGSFLATGSY-DG--YARIWTSDGSLKSTL-GQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS 360 (602)
Q Consensus 285 ~~~~~~~~~~l~~~~~-dg--~i~i~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 360 (602)
..+|+|||+.|+.++. +| .|.+||+.+.....+ ..+...+..+.|+|+|+.|+.++.++.+.+||+.+++......
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 3789999999999887 66 488888875544444 4444455567899999999999999999999999998777666
Q ss_pred eccCCeeeee--ccCCCeEEEe-----------------------eCCCeEEEEEcCCCceeeEeccCCCCeEEEEECC-
Q psy12697 361 FHSAPALDVD--WQSNTSFASC-----------------------STDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDP- 414 (602)
Q Consensus 361 ~~~~~~~~~~--~~~~~~~~~~-----------------------~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~- 414 (602)
.+...+.... +++++.++++ ..+..|++||+.+++.. .+..+...+..++|+|
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~ 198 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPY 198 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETT
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCC
Confidence 5555443333 3677665542 23478999999988654 4445667799999999
Q ss_pred CCCEEEEEECC------CeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEE
Q psy12697 415 QGLLLASCSDD------MTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKW 488 (602)
Q Consensus 415 ~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 488 (602)
+|+.|+..+.+ ..|.++|...+.. ..+..+.. ...+...+|
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~--------------------------------~~~~~~~~~ 245 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAE--------------------------------GESCTHEFW 245 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCT--------------------------------TEEEEEEEE
T ss_pred CCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCC--------------------------------CcccccceE
Confidence 99999888764 2677777665432 22221110 123556778
Q ss_pred ccCCCEEEEEeCC-----CeEEEEeCCCCceee--eecccCC---CeeEeeecCCc-eEEEe---------eCCCcEEEe
Q psy12697 489 NKRGNYILSAGVD-----KTTIIWDAASGQCEQ--QFSFHSA---PALDVDWQSNT-SFASC---------STDQHIHVC 548 (602)
Q Consensus 489 s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~--~~~~~~~---~v~~~~~s~~~-~l~~~---------~~d~~i~iw 548 (602)
||||+.|+..+.+ +.|++||+.+++... .+..+.. ....+.|+||| .|+.. ..+..|++|
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp CTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEE
T ss_pred CCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEE
Confidence 8888877654432 249999999987533 3332111 12234799999 66643 456789999
Q ss_pred ecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEecc-CCeEE
Q psy12697 549 KLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASAS-DGSVF 599 (602)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~-dg~v~ 599 (602)
|+.+++.. .+..+...-..........+.+++|+|||+.|+.++. +|...
T Consensus 326 d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~ 376 (388)
T 3pe7_A 326 NMKNGTQH-RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPA 376 (388)
T ss_dssp ETTTTEEE-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCE
T ss_pred eccCCceE-EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCcee
Confidence 98876532 2222210000000000014678899999998887664 55443
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.84 E-value=1e-18 Score=183.92 Aligned_cols=329 Identities=10% Similarity=0.022 Sum_probs=209.8
Q ss_pred eeeeccCCceEEEEECCCCCeEEEe--eCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcccccccccc
Q psy12697 134 NTLTRHTEPVYSVAFSPDGKFLASG--SFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIP 211 (602)
Q Consensus 134 ~~l~~h~~~V~~~~~s~d~~~l~s~--~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (602)
..+.+|...|..++|++++-++++. +.++...||....+.....
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---------------------------------- 62 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEES---------------------------------- 62 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEE----------------------------------
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcce----------------------------------
Confidence 3467799999999999987777777 5688999998644333322
Q ss_pred CCcceEeeCCCcceE---------EEEEc--CCCCE-EEEeeC-CCcEEEEeCC--C-CCCCCCccceEEEEEEecCCCc
Q psy12697 212 QSKATKLIGHESEVF---------ICAWN--PVKDF-LASGSG-DSTARIWDMT--D-STKKDPKELQIVLRHCISKGGT 275 (602)
Q Consensus 212 ~~~~~~l~~h~~~v~---------~~~~~--~~~~~-l~s~~~-dg~i~iw~~~--~-~~~~~~~~~~~~~~~~~~~~~~ 275 (602)
+..|...+. ...|+ ||++. |+.++. +..|.+|++. . +.... +. . ..
T Consensus 63 ------l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~---l~---~------~~ 124 (662)
T 3azo_A 63 ------ALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRP---LT---P------VS 124 (662)
T ss_dssp ------SSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEE---CS---C------CC
T ss_pred ------eCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEe---cc---C------Cc
Confidence 222322222 34454 99988 766554 4556666654 2 22110 00 0 00
Q ss_pred ccCCCCceeEEeeCCCCCeEEEEeCC----------CeEEEEcCCC------cceeecc-cccCCeEEEEEccCCCEEEE
Q psy12697 276 EVPSNKDVTSLDWNNNGSFLATGSYD----------GYARIWTSDG------SLKSTLG-QHKGPIFALKWNKRGNYILS 338 (602)
Q Consensus 276 ~~~~~~~i~~~~~~~~~~~l~~~~~d----------g~i~i~~~~~------~~~~~~~-~~~~~i~~~~~~~~~~~l~~ 338 (602)
...+...+..++|+|||+.|++++.+ ..|++|++.+ .....+. .+...+..++|+|||++|+.
T Consensus 125 ~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~ 204 (662)
T 3azo_A 125 AVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVW 204 (662)
T ss_dssp CSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEE
T ss_pred cCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEE
Confidence 00134568899999999999998876 5899999987 6666666 66677888999999999998
Q ss_pred EecCC--------cEEEEeCC-CC---ceeEEeeeccCCeeeeeccCCCeEE-EeeCCC--eEEEEEcCCCceeeEeccC
Q psy12697 339 AGVDK--------TTIIWDAA-SG---QCEQQFSFHSAPALDVDWQSNTSFA-SCSTDQ--HIHVCKLHSDKPVKSFEGH 403 (602)
Q Consensus 339 ~~~dg--------~i~~wd~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~i~i~d~~~~~~~~~~~~~ 403 (602)
++.++ .|.+||+. ++ +.......+...+..+.|+|++.++ ++..++ .|++||+.+++.......+
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~ 284 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE 284 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc
Confidence 87553 79999998 56 3433344456788999999987644 455566 6777777666654433333
Q ss_pred CCC--------eEEEEECCCCCEEEEEECCCeEEEE--eCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeee
Q psy12697 404 TNE--------VNAIKWDPQGLLLASCSDDMTLKIW--SLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILK 473 (602)
Q Consensus 404 ~~~--------i~~~~~~~~~~~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 473 (602)
... +..++|+|+++++++++. +.++|| |+.+++ +..+..+...
T Consensus 285 ~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~------------------------- 337 (662)
T 3azo_A 285 EEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTE------------------------- 337 (662)
T ss_dssp SBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCE-------------------------
T ss_pred ccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCe-------------------------
Confidence 222 567899999999999998 999999 555444 4444443332
Q ss_pred eccCCccCCeEEE-EEccCCCEEEEEeCCC--eEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEee
Q psy12697 474 STLGQHKGPIFAL-KWNKRGNYILSAGVDK--TTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCK 549 (602)
Q Consensus 474 ~~~~~~~~~v~~i-~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~ 549 (602)
+..+ +++++.-++++++.+. .|.+||+.+++.......+...+....+++.. ..+....+..|..|-
T Consensus 338 ---------~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~ 408 (662)
T 3azo_A 338 ---------WAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAYYPEPQIRTFTAPDGREIHAHI 408 (662)
T ss_dssp ---------EEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGGSCCCEEEEEECTTSCEEEEEE
T ss_pred ---------EEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCccccCcceEEEEEcCCCCEEEEEE
Confidence 3333 2222222344455554 56666777877655445554455555565555 334433344666554
Q ss_pred c
Q psy12697 550 L 550 (602)
Q Consensus 550 ~ 550 (602)
.
T Consensus 409 ~ 409 (662)
T 3azo_A 409 Y 409 (662)
T ss_dssp E
T ss_pred E
Confidence 3
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.84 E-value=7.2e-18 Score=162.20 Aligned_cols=292 Identities=8% Similarity=0.062 Sum_probs=196.1
Q ss_pred CCCeEEEee------CCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcc
Q psy12697 151 DGKFLASGS------FDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESE 224 (602)
Q Consensus 151 d~~~l~s~~------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~ 224 (602)
+++++.... .|+.|.+||..+++.+..++ .+..+
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~----------------------------------------~g~~p 53 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVP----------------------------------------TAFNG 53 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEE----------------------------------------CCEEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEec----------------------------------------CCCCC
Confidence 555555543 47899999999998775443 23334
Q ss_pred eEEEEEcCCCCEEEEee----------CCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 225 VFICAWNPVKDFLASGS----------GDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 225 v~~~~~~~~~~~l~s~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
.++|+|+++++++++ .++.|.+||..+.+...... ... ....+......++++|+|++
T Consensus 54 --~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~--------~~~--~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 54 --HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEIS--------LPP--KRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp --EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEE--------ECT--TBCCBCCCGGGEEECTTSSE
T ss_pred --ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEE--------cCc--cccccCCCcceEEECCCCCE
Confidence 789999999999886 36789999987654321110 000 00111245678999999999
Q ss_pred EEEEeC--CCeEEEEcCCCc-ceee-cccccCCeEEEEEccCC-CEEEEEecCCcEEEEeCCC-CceeEEe------eec
Q psy12697 295 LATGSY--DGYARIWTSDGS-LKST-LGQHKGPIFALKWNKRG-NYILSAGVDKTTIIWDAAS-GQCEQQF------SFH 362 (602)
Q Consensus 295 l~~~~~--dg~i~i~~~~~~-~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~wd~~~-~~~~~~~------~~~ 362 (602)
|+++.. ++.|.+||.... .... +. .. ....+.+.|++ ..+++.+.||.+.+|+... ++..... ...
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~ 199 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGDYVEDVTA-AA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVK 199 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTEEEEEEGG-GT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTT
T ss_pred EEEECCCCCCeEEEEECCCCcEEEEEec-CC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCC
Confidence 998874 579999998744 3333 32 22 22335567765 6778888999999998865 5544221 111
Q ss_pred cCCeeeeeccCC-CeEEEeeCCCeEEEEEcCCCcee--eEecc------CC----CCeEEEEECCCCCEEEEEEC-----
Q psy12697 363 SAPALDVDWQSN-TSFASCSTDQHIHVCKLHSDKPV--KSFEG------HT----NEVNAIKWDPQGLLLASCSD----- 424 (602)
Q Consensus 363 ~~~~~~~~~~~~-~~~~~~~~~~~i~i~d~~~~~~~--~~~~~------~~----~~i~~~~~~~~~~~l~~~~~----- 424 (602)
..++ .+...++ ..++..+.++.+.++|+...... ..+.. +. .....++|+|+++.++++..
T Consensus 200 ~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~ 278 (361)
T 2oiz_A 200 DDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKE 278 (361)
T ss_dssp TSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCT
T ss_pred CCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCc
Confidence 1121 2222333 35666677899999998765421 11110 01 11123789999888877653
Q ss_pred ------CCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE
Q psy12697 425 ------DMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA 498 (602)
Q Consensus 425 ------dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~ 498 (602)
.+.|.+||+.+++.+.++..+. +.+++|+|||++|+++
T Consensus 279 ~~~~~~~~~v~viD~~t~~~v~~i~~~~------------------------------------p~~ia~spdg~~l~v~ 322 (361)
T 2oiz_A 279 GTHKFPAAEIWVMDTKTKQRVARIPGRD------------------------------------ALSMTIDQQRNLMLTL 322 (361)
T ss_dssp TCTTCCCSEEEEEETTTTEEEEEEECTT------------------------------------CCEEEEETTTTEEEEE
T ss_pred ccccCCCceEEEEECCCCcEEEEEecCC------------------------------------eeEEEECCCCCEEEEe
Confidence 3589999999998887775432 5677888899999988
Q ss_pred eCCCeEEEEeCCCC--ceeeeecccCCCeeEeeecCCc
Q psy12697 499 GVDKTTIIWDAASG--QCEQQFSFHSAPALDVDWQSNT 534 (602)
Q Consensus 499 ~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~s~~~ 534 (602)
+. +.|.+||..++ +.+..+..+......++++|+|
T Consensus 323 n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 323 DG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp CS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred CC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 86 99999999999 9888886677778899999997
No 170
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=4.5e-18 Score=164.65 Aligned_cols=266 Identities=13% Similarity=0.042 Sum_probs=172.9
Q ss_pred EEEEeCC--CeEEEEcCC--Ccceeecc----cccCCeEEEEEccCCCEEEEEecCCcEEEEeCC-CCceeEEeeec-cC
Q psy12697 295 LATGSYD--GYARIWTSD--GSLKSTLG----QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA-SGQCEQQFSFH-SA 364 (602)
Q Consensus 295 l~~~~~d--g~i~i~~~~--~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~-~~~~~~~~~~~-~~ 364 (602)
+++|+.. +.|.+|+++ ......+. .....+..++|+|++++|++++.+ .|.+|++. +++........ ..
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g 83 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGG 83 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCS
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCC
Confidence 4555543 457776542 22222221 233467889999999999998888 99999997 77665433321 13
Q ss_pred CeeeeeccCCCe--EE-Eee-------------CCCeEEEEEcC-CCceeeEec----cCCCCeEEEEECCCCCEEEEEE
Q psy12697 365 PALDVDWQSNTS--FA-SCS-------------TDQHIHVCKLH-SDKPVKSFE----GHTNEVNAIKWDPQGLLLASCS 423 (602)
Q Consensus 365 ~~~~~~~~~~~~--~~-~~~-------------~~~~i~i~d~~-~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~ 423 (602)
....++++|++. ++ ++. .++.+.+|++. .++....+. .+...+.+++|+|+|++|++++
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 356789999987 33 442 68999999997 455443333 2456799999999999888876
Q ss_pred C-CCeEEEEeCC-CCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeC-
Q psy12697 424 D-DMTLKIWSLD-KDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGV- 500 (602)
Q Consensus 424 ~-dg~i~iwd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~- 500 (602)
. ++.|++||+. +++..... .+. ...+...+..++|+|||++|++++.
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~--------~~~----------------------~~~~g~~p~~~~~spdg~~l~v~~~~ 213 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVG--------SVD----------------------APDPGDHPRWVAMHPTGNYLYALMEA 213 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEE--------EEE----------------------CSSTTCCEEEEEECTTSSEEEEEETT
T ss_pred CCCCEEEEEEECCCCCEEEee--------eEe----------------------cCCCCCCCCEeEECCCCCEEEEEECC
Confidence 4 6799999998 55432110 000 0012345778889999999888775
Q ss_pred CCeEEEEeCC--CCceee------eec----ccCC------CeeEee-ecCCc-eEEEeeCC-C-----cEEEeecC-CC
Q psy12697 501 DKTTIIWDAA--SGQCEQ------QFS----FHSA------PALDVD-WQSNT-SFASCSTD-Q-----HIHVCKLH-SD 553 (602)
Q Consensus 501 dg~i~iwd~~--~~~~~~------~~~----~~~~------~v~~~~-~s~~~-~l~~~~~d-~-----~i~iw~~~-~~ 553 (602)
++.|.+|++. +++... .+. +|.. .+..++ |+||| +|++++.+ + .|.+|++. ++
T Consensus 214 ~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g 293 (365)
T 1jof_A 214 GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCG 293 (365)
T ss_dssp TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTS
T ss_pred CCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCC
Confidence 6899999765 565421 221 1222 478899 99999 67665543 3 89999986 44
Q ss_pred CceeeeecccccceEEEEe-cCCcEEEEEECC---CCCeEEEeccC-CeEEe
Q psy12697 554 KPVKSFEGHTTGQLVHSYK-GTGGIFEVCWNS---RGDKVGASASD-GSVFK 600 (602)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~sp---dg~~l~~~~~d-g~v~i 600 (602)
+...... ... ....+..++|+| ||++|++++.+ +.|.|
T Consensus 294 ~~~~~~~---------~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v 336 (365)
T 1jof_A 294 SIEKQLF---------LSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEI 336 (365)
T ss_dssp CEEEEEE---------EEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEE
T ss_pred CEEEeee---------eeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEE
Confidence 4222110 011 123356789999 89999999875 77765
No 171
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=1.7e-18 Score=167.56 Aligned_cols=248 Identities=9% Similarity=0.103 Sum_probs=169.4
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCC--Ccceeeccc-ccCCeEEEEEccCCCE--EEEEe-------------cC
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSD--GSLKSTLGQ-HKGPIFALKWNKRGNY--ILSAG-------------VD 342 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~--~~~~~~~~~-~~~~i~~~~~~~~~~~--l~~~~-------------~d 342 (602)
..+..++|+|+|++|++++.+ .|.+|++. ++....... ..+.+.+++|+|+|++ ++++. .+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 467899999999999998887 99999974 443322211 1123556899999995 44543 68
Q ss_pred CcEEEEeCC-CCceeEEeee----ccCCeeeeeccCCCe-EEEee-CCCeEEEEEcC-CCcee--eEec--cCCCCeEEE
Q psy12697 343 KTTIIWDAA-SGQCEQQFSF----HSAPALDVDWQSNTS-FASCS-TDQHIHVCKLH-SDKPV--KSFE--GHTNEVNAI 410 (602)
Q Consensus 343 g~i~~wd~~-~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~-~~~~i~i~d~~-~~~~~--~~~~--~~~~~i~~~ 410 (602)
|.+.+|++. +++....+.. +...+..+.|+|++. ++++. .++.|++|++. +++.. ..+. .|...+..+
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~ 198 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWV 198 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEe
Confidence 999999997 4665544432 446788999999976 44444 46799999998 66543 2333 245679999
Q ss_pred EECCCCCEEEEEEC-CCeEEEEeCC--CCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccC------
Q psy12697 411 KWDPQGLLLASCSD-DMTLKIWSLD--KDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKG------ 481 (602)
Q Consensus 411 ~~~~~~~~l~~~~~-dg~i~iwd~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 481 (602)
+|+|+|++|++++. ++.|.+|+++ +++...... .+...|.+ ..++..
T Consensus 199 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~-------~~~~~~~~-----------------~~g~~~~~~~~~ 254 (365)
T 1jof_A 199 AMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHH-------SFPLIPPG-----------------IPDRDPETGKGL 254 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE-------EEESSCTT-----------------CCCBCTTTSSBS
T ss_pred EECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccc-------eEEcCCCC-----------------cCCccccccccc
Confidence 99999999988875 6899999865 343321000 01101100 011222
Q ss_pred CeEEEE-EccCCCEEEEEeCCC------eEEEEeCC-CCceee---eecccCCCeeEeeecC---Cc-eEEEeeC-CCcE
Q psy12697 482 PIFALK-WNKRGNYILSAGVDK------TTIIWDAA-SGQCEQ---QFSFHSAPALDVDWQS---NT-SFASCST-DQHI 545 (602)
Q Consensus 482 ~v~~i~-~s~~~~~l~s~~~dg------~i~iwd~~-~~~~~~---~~~~~~~~v~~~~~s~---~~-~l~~~~~-d~~i 545 (602)
.+..++ |+|||++|+++..+. .|.+|++. +++... ....+...+..++|+| || +|++++. ++.|
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v 334 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWL 334 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEE
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeE
Confidence 577899 999999988765432 89999996 666543 2333555677899999 78 8888776 4899
Q ss_pred EEeecCCC
Q psy12697 546 HVCKLHSD 553 (602)
Q Consensus 546 ~iw~~~~~ 553 (602)
.+|+++..
T Consensus 335 ~v~~~~~~ 342 (365)
T 1jof_A 335 EIYRWKDE 342 (365)
T ss_dssp EEEEEETT
T ss_pred EEEEEchh
Confidence 99998654
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.82 E-value=1.8e-18 Score=182.11 Aligned_cols=296 Identities=9% Similarity=0.041 Sum_probs=199.5
Q ss_pred eEeeCCCcceEEEEEcCCCCEEEEe--eCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCcee---------
Q psy12697 216 TKLIGHESEVFICAWNPVKDFLASG--SGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVT--------- 284 (602)
Q Consensus 216 ~~l~~h~~~v~~~~~~~~~~~l~s~--~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--------- 284 (602)
..+.+|...+..++|+++.-+++.. +.++...||....+... ..+ ..+...+.
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~l-----------~~~~~~~~~~~~~~~~~ 80 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAE-----ESA-----------LPAPWNVRNRVFEYSGF 80 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCE-----EES-----------SCTTCCBCCCGGGTCCC
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCc-----cee-----------CCCCccccccccccCCc
Confidence 3456789999999999887666666 55889999996433211 000 01112223
Q ss_pred EEeeC--CCCCe-EEEEeC-CCeEEEEcCC--C-cceeeccc-----ccCCeEEEEEccCCCEEEEEecC----------
Q psy12697 285 SLDWN--NNGSF-LATGSY-DGYARIWTSD--G-SLKSTLGQ-----HKGPIFALKWNKRGNYILSAGVD---------- 342 (602)
Q Consensus 285 ~~~~~--~~~~~-l~~~~~-dg~i~i~~~~--~-~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d---------- 342 (602)
...|+ |||+. |+.+.. +..|.+++.. + .....+.. |...+..++|+|||+.|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 44454 99998 776654 5778888877 4 44555555 56778999999999999988876
Q ss_pred CcEEEEeCCC------CceeEEee-eccCCeeeeeccCCCe-EEEeeCC--------CeEEEEEcC-CC---ceeeEecc
Q psy12697 343 KTTIIWDAAS------GQCEQQFS-FHSAPALDVDWQSNTS-FASCSTD--------QHIHVCKLH-SD---KPVKSFEG 402 (602)
Q Consensus 343 g~i~~wd~~~------~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~--------~~i~i~d~~-~~---~~~~~~~~ 402 (602)
..|.+||+.+ ++. ..+. .+...+..+.|+|++. ++.++.+ ..|++||+. ++ +......+
T Consensus 161 ~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 5899999988 544 3444 4456778889999976 5555533 479999998 56 44444455
Q ss_pred CCCCeEEEEECCCCCEEEEEECCC--eEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCcc
Q psy12697 403 HTNEVNAIKWDPQGLLLASCSDDM--TLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHK 480 (602)
Q Consensus 403 ~~~~i~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (602)
|...+..++|+|||+++++++.++ .|.+||+.+++...... +...+....|++
T Consensus 240 ~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~-~~~~~~~p~w~~------------------------ 294 (662)
T 3azo_A 240 PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR-REEEFAGPLWTP------------------------ 294 (662)
T ss_dssp TTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC-CSSBSSCCCCST------------------------
T ss_pred CCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc-ccccccCccccc------------------------
Confidence 678899999999999888888888 67777765655433222 222111111221
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEE--eCCCCceeeeecccCCCeeEe-eecCCc-eEEEeeCCC--cEEEeecCCCC
Q psy12697 481 GPIFALKWNKRGNYILSAGVDKTTIIW--DAASGQCEQQFSFHSAPALDV-DWQSNT-SFASCSTDQ--HIHVCKLHSDK 554 (602)
Q Consensus 481 ~~v~~i~~s~~~~~l~s~~~dg~i~iw--d~~~~~~~~~~~~~~~~v~~~-~~s~~~-~l~~~~~d~--~i~iw~~~~~~ 554 (602)
.+..++|+|++++++++.. +.++|| |+.+++ +..+..|...+..+ .++++. .+++++.+. .|.+||+.+++
T Consensus 295 -~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 295 -GMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp -TCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred -cCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 1345889999999999998 999999 655555 66777777777777 565555 445555554 45555666665
Q ss_pred ce
Q psy12697 555 PV 556 (602)
Q Consensus 555 ~~ 556 (602)
..
T Consensus 372 ~~ 373 (662)
T 3azo_A 372 AR 373 (662)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 173
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.80 E-value=1.4e-15 Score=153.44 Aligned_cols=329 Identities=13% Similarity=0.068 Sum_probs=221.6
Q ss_pred ccceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecC--CceeEEEeeccCceEEEEeCCCCCCC
Q psy12697 119 RLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSAR--TGQLVHSYKGTGGIFEVCWNSRGTPP 196 (602)
Q Consensus 119 ~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (602)
.++|.++|..+++.+.++... ..+..+.|||||++|++++.|+.|.+||+. +++.+.+++.
T Consensus 176 ~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~---------------- 238 (567)
T 1qks_A 176 AGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI---------------- 238 (567)
T ss_dssp TTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC----------------
T ss_pred CCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec----------------
Confidence 468999999999999988743 356799999999999999999999999996 7777655432
Q ss_pred CCCCCccccccccccCCcceEeeCCCcceEEEEEc----CCCCEEEEeeC-CCcEEEEeCCCCCCCCCccceEEEEEEec
Q psy12697 197 NPPESMEVDASIEIPQSKATKLIGHESEVFICAWN----PVKDFLASGSG-DSTARIWDMTDSTKKDPKELQIVLRHCIS 271 (602)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~----~~~~~l~s~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~ 271 (602)
......++|+ |||+++++++. ++.+.++|..+.+......... ..
T Consensus 239 -------------------------G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~-----~~ 288 (567)
T 1qks_A 239 -------------------------GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRG-----MT 288 (567)
T ss_dssp -------------------------CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCE-----EC
T ss_pred -------------------------CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccc-----cc
Confidence 2235678999 69998887765 5999999987655322111100 00
Q ss_pred CCCcccCCCCceeEEeeCCCCCeEEE-EeCCCeEEEEcCCCcc--eeecccccCCeEEEEEccCCCEEEEEe-cCCcEEE
Q psy12697 272 KGGTEVPSNKDVTSLDWNNNGSFLAT-GSYDGYARIWTSDGSL--KSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTII 347 (602)
Q Consensus 272 ~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~ 347 (602)
...........+..+..++++..+++ ...+|.|.++|..... ............++.|+|++++++++. .++.|.+
T Consensus 289 ~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~V 368 (567)
T 1qks_A 289 YDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVV 368 (567)
T ss_dssp TTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEE
T ss_pred cccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEE
Confidence 00000011235778888887665444 4556999999976421 111112344567889999999987665 5789999
Q ss_pred EeCCCCceeEEeee-ccCC--eeeee-ccCC-CeEEEee--CCCeEEEEEcCC-------CceeeEeccCCCCeEEEEEC
Q psy12697 348 WDAASGQCEQQFSF-HSAP--ALDVD-WQSN-TSFASCS--TDQHIHVCKLHS-------DKPVKSFEGHTNEVNAIKWD 413 (602)
Q Consensus 348 wd~~~~~~~~~~~~-~~~~--~~~~~-~~~~-~~~~~~~--~~~~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~~ 413 (602)
+|+.+++....+.. ...+ -.... +.|+ +.+.+.+ .++.|.++|..+ .+.+.++......-..+..+
T Consensus 369 iD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~ 448 (567)
T 1qks_A 369 IDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTH 448 (567)
T ss_dssp EETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECC
T ss_pred EECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeC
Confidence 99999988877655 2221 12222 3565 4444333 468999999987 56777777654444567899
Q ss_pred CCCCEEEEEEC-------CCeEEEEeCCCC-----eee-EeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCcc
Q psy12697 414 PQGLLLASCSD-------DMTLKIWSLDKD-----NCV-HDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHK 480 (602)
Q Consensus 414 ~~~~~l~~~~~-------dg~i~iwd~~~~-----~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (602)
|++++|.+... .++|.++|+.+. ... ..+... .|+ .+....
T Consensus 449 p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~-------~~~-------------------~~~~~~ 502 (567)
T 1qks_A 449 PNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIA-------EWA-------------------GITEGQ 502 (567)
T ss_dssp TTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHH-------HHH-------------------TCCSSC
T ss_pred CCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccc-------ccc-------------------ccCCCC
Confidence 99999998763 358999998865 111 111100 000 011123
Q ss_pred CCeEEEEEccCCCEEEEEe-----CCCeEEEEeCCCCceeeeecc
Q psy12697 481 GPIFALKWNKRGNYILSAG-----VDKTTIIWDAASGQCEQQFSF 520 (602)
Q Consensus 481 ~~v~~i~~s~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~ 520 (602)
..+..+.|+|+|+++..+. .++.|.|+|..+++++..+..
T Consensus 503 ~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 503 PRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp CEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred cceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence 4677888889998877663 379999999999998888774
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.80 E-value=4.3e-16 Score=145.31 Aligned_cols=239 Identities=11% Similarity=0.168 Sum_probs=175.9
Q ss_pred CCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecc------cccCCeEEEEE-ccCCCEEEEEec-CCcEEEEeCC
Q psy12697 280 NKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLG------QHKGPIFALKW-NKRGNYILSAGV-DKTTIIWDAA 351 (602)
Q Consensus 280 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~------~~~~~i~~~~~-~~~~~~l~~~~~-dg~i~~wd~~ 351 (602)
-..+.+++++++++++++...++.|.+|+.++.....+. .+...+..+++ .++++.+++... ++.|.+|| .
T Consensus 29 ~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~ 107 (286)
T 1q7f_A 29 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-Q 107 (286)
T ss_dssp BSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-T
T ss_pred cCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-C
Confidence 356899999999998888888999999998877665553 23457889999 467766665543 88999999 5
Q ss_pred CCceeEEeee-ccCCeeeeeccCCCeEEEe-eCCCeEEEEEcCCCceeeEec--cCCCCeEEEEECCCCCEEEEEECCCe
Q psy12697 352 SGQCEQQFSF-HSAPALDVDWQSNTSFASC-STDQHIHVCKLHSDKPVKSFE--GHTNEVNAIKWDPQGLLLASCSDDMT 427 (602)
Q Consensus 352 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~ 427 (602)
+++.+..+.. ....+..+++.+++.++++ ..++.|.+||.. ++.+..+. .+...+..++++|+|+++++...++.
T Consensus 108 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~ 186 (286)
T 1q7f_A 108 YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC 186 (286)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE
T ss_pred CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCE
Confidence 6776666543 3346788899888766555 457899999964 55555553 34557899999999998888888899
Q ss_pred EEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCC-eEEE
Q psy12697 428 LKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDK-TTII 506 (602)
Q Consensus 428 i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg-~i~i 506 (602)
|++||.. ++.+..+... ++...+..++++++|+++++...++ .|.+
T Consensus 187 i~~~~~~-g~~~~~~~~~--------------------------------g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~ 233 (286)
T 1q7f_A 187 VKVFNYE-GQYLRQIGGE--------------------------------GITNYPIGVGINSNGEILIADNHNNFNLTI 233 (286)
T ss_dssp EEEEETT-CCEEEEESCT--------------------------------TTSCSEEEEEECTTCCEEEEECSSSCEEEE
T ss_pred EEEEcCC-CCEEEEEccC--------------------------------CccCCCcEEEECCCCCEEEEeCCCCEEEEE
Confidence 9999974 4444333211 1224567888999999888888776 9999
Q ss_pred EeCCCCceeeeecccCC--CeeEeeecCCceEEEeeCCCcEEEeecCCCC
Q psy12697 507 WDAASGQCEQQFSFHSA--PALDVDWQSNTSFASCSTDQHIHVCKLHSDK 554 (602)
Q Consensus 507 wd~~~~~~~~~~~~~~~--~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~ 554 (602)
||. +++.+..+..+.. .+.+++++|+|.+++++.|+.|++|++....
T Consensus 234 ~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 234 FTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQLA 282 (286)
T ss_dssp ECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSCCC
T ss_pred ECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccccc
Confidence 995 5777777765443 3779999999944434679999999976543
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.79 E-value=8.8e-18 Score=165.03 Aligned_cols=278 Identities=10% Similarity=0.037 Sum_probs=178.8
Q ss_pred ceeEEeeCCCCCeEEEEeCC---CeEEEEcCCCcceeecccccCCeE-EEEEccCCCEEEEEecCCcEEEEeCCCCceeE
Q psy12697 282 DVTSLDWNNNGSFLATGSYD---GYARIWTSDGSLKSTLGQHKGPIF-ALKWNKRGNYILSAGVDKTTIIWDAASGQCEQ 357 (602)
Q Consensus 282 ~i~~~~~~~~~~~l~~~~~d---g~i~i~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 357 (602)
.+..++|+|+|++|+..... ..|.+|+..+.....+..+..... .+.|+|+|++|+.++.++.+.+||+.+++...
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence 36778999999998877553 368888987665555544443333 37899999999999999999999999887665
Q ss_pred EeeeccCCeee-------------------eeccCCCeE-EEe-----eCCCeEEEEEcCCCceeeEeccCCCCeEEEEE
Q psy12697 358 QFSFHSAPALD-------------------VDWQSNTSF-ASC-----STDQHIHVCKLHSDKPVKSFEGHTNEVNAIKW 412 (602)
Q Consensus 358 ~~~~~~~~~~~-------------------~~~~~~~~~-~~~-----~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 412 (602)
....+...... ..|+|++.. +.. ..+..|++||+.+++..... .+...+..+.|
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~ 195 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIY 195 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceE
Confidence 55433332222 355665542 222 35668999999988765444 46677899999
Q ss_pred CC-CCCEEEEEECC------CeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEE
Q psy12697 413 DP-QGLLLASCSDD------MTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFA 485 (602)
Q Consensus 413 ~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 485 (602)
+| +++.|+..+.+ ..|.+||+..++.. .+..+. ....+..
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~--------------------------------~~~~~~~ 242 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHA--------------------------------EGESCTH 242 (396)
T ss_dssp ETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCC--------------------------------TTEEEEE
T ss_pred CCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccC--------------------------------CCccccc
Confidence 99 88877776653 35788887654322 111110 0123566
Q ss_pred EEEccCCCEEEEEeCC-----CeEEEEeCCCCceeeeecccCCCeeEeeecC-Cc-eEEEee----------------CC
Q psy12697 486 LKWNKRGNYILSAGVD-----KTTIIWDAASGQCEQQFSFHSAPALDVDWQS-NT-SFASCS----------------TD 542 (602)
Q Consensus 486 i~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~-~l~~~~----------------~d 542 (602)
++|+|||++|+.++.+ +.|++||+.+++........ ... +.|+| || .+++++ .+
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~ 319 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEND 319 (396)
T ss_dssp EEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCC
T ss_pred eEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCC
Confidence 7888899888777654 45999999988754433211 123 88999 99 666654 34
Q ss_pred CcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEecc-CCe
Q psy12697 543 QHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASAS-DGS 597 (602)
Q Consensus 543 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~-dg~ 597 (602)
..|++||+.+++.. .+..+...-..........+..++|+|||+.|+.++. ++.
T Consensus 320 ~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~ 374 (396)
T 3c5m_A 320 PFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGV 374 (396)
T ss_dssp CEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSS
T ss_pred CcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCC
Confidence 78999998876542 2222210000000000002456789999998887765 443
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.79 E-value=8.8e-17 Score=152.96 Aligned_cols=244 Identities=12% Similarity=0.158 Sum_probs=179.6
Q ss_pred CCceeEEeeCCCCCeEEEEeCC------------------------CeEEEEcCC-Ccceeecc-cccCCeEEEEEccCC
Q psy12697 280 NKDVTSLDWNNNGSFLATGSYD------------------------GYARIWTSD-GSLKSTLG-QHKGPIFALKWNKRG 333 (602)
Q Consensus 280 ~~~i~~~~~~~~~~~l~~~~~d------------------------g~i~i~~~~-~~~~~~~~-~~~~~i~~~~~~~~~ 333 (602)
-..+.+++++|+|+++++...+ +.|.+||.. +....... .+......++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3679999999999999888777 479999986 66554443 344578999999999
Q ss_pred CEEEEEecCCcEEEEeCCCCc-eeEEee---------eccCCeeeeeccC-CCeEEEee--CCCeEEEEEcCCCceeeEe
Q psy12697 334 NYILSAGVDKTTIIWDAASGQ-CEQQFS---------FHSAPALDVDWQS-NTSFASCS--TDQHIHVCKLHSDKPVKSF 400 (602)
Q Consensus 334 ~~l~~~~~dg~i~~wd~~~~~-~~~~~~---------~~~~~~~~~~~~~-~~~~~~~~--~~~~i~i~d~~~~~~~~~~ 400 (602)
+.+++...++.|++||..... .+..+. .+...+..+++.+ ++.++++. .++.|++|+ .+++.+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 988888888999999976542 444442 2233578899998 66665555 589999999 566666666
Q ss_pred ccC----------CCCeEEEEECCC-CCEEEEEECCCeEEEEeCCCCeeeEeecc--ccccEEEEEECCCCCCCCCCCcc
Q psy12697 401 EGH----------TNEVNAIKWDPQ-GLLLASCSDDMTLKIWSLDKDNCVHDLQA--HNKEIYTIKWSPTGPETSNPNMS 467 (602)
Q Consensus 401 ~~~----------~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~ 467 (602)
... ......++++|+ +.++++...++.|++||..+++.+..+.. +...+..++++| +
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g--------- 251 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-G--------- 251 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-T---------
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-C---------
Confidence 422 234899999998 77777777889999999988887777642 233344444443 1
Q ss_pred eeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec---ccCCCeeEeeecCCc-eEEEeeCCC
Q psy12697 468 LIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS---FHSAPALDVDWQSNT-SFASCSTDQ 543 (602)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~s~~~-~l~~~~~d~ 543 (602)
+.+..+|+..++...+..|++||..+++.+..+. .+...+..++++|+| .+++...++
T Consensus 252 ------------------~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 252 ------------------FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp ------------------EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSC
T ss_pred ------------------EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCC
Confidence 1222245545555556789999999999988873 566778999999999 888888899
Q ss_pred cEEEeecCC
Q psy12697 544 HIHVCKLHS 552 (602)
Q Consensus 544 ~i~iw~~~~ 552 (602)
.|++|++..
T Consensus 314 ~I~~~~~~~ 322 (329)
T 3fvz_A 314 TVWKFTLTE 322 (329)
T ss_dssp CEEEEEEEE
T ss_pred EEEEEeCCc
Confidence 999999753
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.79 E-value=8.3e-17 Score=153.89 Aligned_cols=271 Identities=9% Similarity=0.050 Sum_probs=187.8
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEee
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS 360 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 360 (602)
..+.++.|++++..++....++.++.| .+.....+..+...+.+++|+++++.++++..++.|.+||..+++......
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI--TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV 83 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE--ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc--ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee
Confidence 457888999988877777788888888 444555666677778999999999977788889999999999887665444
Q ss_pred eccCCeeeeeccCCCeEEEeeCC-----CeEEEEEcCCCceeeEec--cCCCCeEEEEECCCCCEEEEEEC------CCe
Q psy12697 361 FHSAPALDVDWQSNTSFASCSTD-----QHIHVCKLHSDKPVKSFE--GHTNEVNAIKWDPQGLLLASCSD------DMT 427 (602)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~------dg~ 427 (602)
.....+..+++++++.++++... +.|.+||..+++....+. .+...+..++++|+|+++++... .+.
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~ 163 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGG 163 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCce
Confidence 45677899999998876666544 589999998876543332 24457999999999988877654 355
Q ss_pred EEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEE-EEeCCCeEEE
Q psy12697 428 LKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYIL-SAGVDKTTII 506 (602)
Q Consensus 428 i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~-s~~~dg~i~i 506 (602)
|..+|..+++... +.. ....+..++|+|+|++|+ +...++.|.+
T Consensus 164 l~~~~~~~~~~~~-~~~----------------------------------~~~~~~~i~~~~dg~~l~v~~~~~~~i~~ 208 (333)
T 2dg1_A 164 VYYVSPDFRTVTP-IIQ----------------------------------NISVANGIALSTDEKVLWVTETTANRLHR 208 (333)
T ss_dssp EEEECTTSCCEEE-EEE----------------------------------EESSEEEEEECTTSSEEEEEEGGGTEEEE
T ss_pred EEEEeCCCCEEEE-eec----------------------------------CCCcccceEECCCCCEEEEEeCCCCeEEE
Confidence 6666655433221 110 112356788888998665 4456789999
Q ss_pred EeCCC-Cceeee--------ecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCc
Q psy12697 507 WDAAS-GQCEQQ--------FSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGG 576 (602)
Q Consensus 507 wd~~~-~~~~~~--------~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (602)
||+.+ +..+.. +.++ ..+..++++++| .+++...++.|.+||. +++.+..+....... .....
T Consensus 209 ~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~-----g~~~~ 281 (333)
T 2dg1_A 209 IALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDE-----GHMLR 281 (333)
T ss_dssp EEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGG-----TCSCB
T ss_pred EEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCcc-----ccccC
Confidence 99863 333221 1112 357789999999 6666667889999997 444444443221000 00014
Q ss_pred EEEEEECCCCCeEEEeccC
Q psy12697 577 IFEVCWNSRGDKVGASASD 595 (602)
Q Consensus 577 i~~l~~spdg~~l~~~~~d 595 (602)
+.+++|+||++.|++++.+
T Consensus 282 ~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 282 STHPQFIPGTNQLIICSND 300 (333)
T ss_dssp CCEEEECTTSCEEEEEEEC
T ss_pred cceEEECCCCCEEEEEeCc
Confidence 7899999999888777766
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=4.1e-16 Score=148.35 Aligned_cols=250 Identities=9% Similarity=0.087 Sum_probs=184.2
Q ss_pred CCceEEEEECCCCCeEEEeeCC------------------------ceEEEEecCCceeEEEeeccCceEEEEeCCCCCC
Q psy12697 140 TEPVYSVAFSPDGKFLASGSFD------------------------KCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTP 195 (602)
Q Consensus 140 ~~~V~~~~~s~d~~~l~s~~~d------------------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (602)
-+.+.+++++|+|+++++...+ ++|.+||..+++.+..+.
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~---------------- 86 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG---------------- 86 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC----------------
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC----------------
Confidence 3678999999999999988877 468888888777654321
Q ss_pred CCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCc
Q psy12697 196 PNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGT 275 (602)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (602)
.++......++++|+++++++...++.|++|+....... .... .. ....+.
T Consensus 87 -----------------------~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~----~~~~-~~-~~~~g~ 137 (329)
T 3fvz_A 87 -----------------------KNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGP----LLIL-GR-SMQPGS 137 (329)
T ss_dssp -----------------------TTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCC----SEEE-SB-TTBCCC
T ss_pred -----------------------CCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEE----EEEe-cc-cCCCCC
Confidence 134456889999999998888888999999997644211 0000 00 000000
Q ss_pred ccCCCCceeEEeeCC-CCCeEEEEe-CCCeEEEEcCCCcceeeccc----------ccCCeEEEEEccC-CCEEEEEecC
Q psy12697 276 EVPSNKDVTSLDWNN-NGSFLATGS-YDGYARIWTSDGSLKSTLGQ----------HKGPIFALKWNKR-GNYILSAGVD 342 (602)
Q Consensus 276 ~~~~~~~i~~~~~~~-~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~----------~~~~i~~~~~~~~-~~~l~~~~~d 342 (602)
...+-.....++++| ++.++++.+ .++.|++|+.++.....+.. +......++++|+ ++.+++...+
T Consensus 138 ~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~ 217 (329)
T 3fvz_A 138 DQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN 217 (329)
T ss_dssp STTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT
T ss_pred CccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC
Confidence 112234688999999 788888876 68999999988887776643 2234889999998 6666777788
Q ss_pred CcEEEEeCCCCceeEEeee--ccCCeeeeeccCCCeEEEe--------eCCCeEEEEEcCCCceeeEec---cCCCCeEE
Q psy12697 343 KTTIIWDAASGQCEQQFSF--HSAPALDVDWQSNTSFASC--------STDQHIHVCKLHSDKPVKSFE---GHTNEVNA 409 (602)
Q Consensus 343 g~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~i~i~d~~~~~~~~~~~---~~~~~i~~ 409 (602)
+.|++||..+++.+..+.. ....+..+++.| +.++.. ..+..|++|+..+++.+..+. ++...+..
T Consensus 218 ~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ 296 (329)
T 3fvz_A 218 GRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHD 296 (329)
T ss_dssp TEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEE
T ss_pred CEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeE
Confidence 9999999998988887743 345677888888 333222 234589999999999888873 67778999
Q ss_pred EEECCCCCEEEEEECCCeEEEEeCCC
Q psy12697 410 IKWDPQGLLLASCSDDMTLKIWSLDK 435 (602)
Q Consensus 410 ~~~~~~~~~l~~~~~dg~i~iwd~~~ 435 (602)
++++|+|.++++...++.|++|++..
T Consensus 297 ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 297 IVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCc
Confidence 99999998888888899999999753
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.78 E-value=2.4e-16 Score=147.08 Aligned_cols=245 Identities=12% Similarity=0.161 Sum_probs=176.8
Q ss_pred ccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceE
Q psy12697 138 RHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATK 217 (602)
Q Consensus 138 ~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (602)
+|-..+.+++++++|+++++...++.|.+||.. ++.+..+.... .
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~----------------------------------~ 71 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECG----------------------------------K 71 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBS----------------------------------S
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccC----------------------------------C
Confidence 456779999999999999988899999999987 55554432110 0
Q ss_pred eeCCCcceEEEEEc-CCCCEEEEeeC-CCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeE
Q psy12697 218 LIGHESEVFICAWN-PVKDFLASGSG-DSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFL 295 (602)
Q Consensus 218 l~~h~~~v~~~~~~-~~~~~l~s~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 295 (602)
..+|...+..+++. +++.++++... ++.|.+|+. ++... .. +. ......+.+++++|+|+++
T Consensus 72 ~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~-~g~~~---------~~-~~-----~~~~~~~~~i~~~~~g~l~ 135 (286)
T 1q7f_A 72 RDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFV---------RK-FG-----ATILQHPRGVTVDNKGRII 135 (286)
T ss_dssp STTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEE---------EE-EC-----TTTCSCEEEEEECTTSCEE
T ss_pred CcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECC-CCcEE---------EE-ec-----CccCCCceEEEEeCCCCEE
Confidence 01345568899994 66666666543 889999994 33211 00 00 1123567899999999988
Q ss_pred EEEeCCCeEEEEcCCCcceeecc--cccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeec--cCCeeeeec
Q psy12697 296 ATGSYDGYARIWTSDGSLKSTLG--QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH--SAPALDVDW 371 (602)
Q Consensus 296 ~~~~~dg~i~i~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~--~~~~~~~~~ 371 (602)
++...++.|.+|+.++.....+. .+...+..++++++++.+++...++.|.+||. +++.+..+... ...+..+++
T Consensus 136 v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~ 214 (286)
T 1q7f_A 136 VVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGI 214 (286)
T ss_dssp EEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEE
T ss_pred EEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEE
Confidence 88778899999998877666553 34456899999999997777778899999997 45555555433 256788999
Q ss_pred cCCCeEEEee-CCC-eEEEEEcCCCceeeEeccCCC--CeEEEEECCCCCEEEEEECCCeEEEEeCCCC
Q psy12697 372 QSNTSFASCS-TDQ-HIHVCKLHSDKPVKSFEGHTN--EVNAIKWDPQGLLLASCSDDMTLKIWSLDKD 436 (602)
Q Consensus 372 ~~~~~~~~~~-~~~-~i~i~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 436 (602)
.+++.++++. .++ .|.+|+. +++.+..+..+.. .+.+++++|+|+++++ +.|+.|++|++...
T Consensus 215 d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 215 NSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp CTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 8887766555 454 9999995 4566666655433 4789999999987776 67999999998653
No 180
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.77 E-value=6.4e-15 Score=148.64 Aligned_cols=319 Identities=10% Similarity=0.065 Sum_probs=214.4
Q ss_pred CCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEE
Q psy12697 150 PDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICA 229 (602)
Q Consensus 150 ~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~ 229 (602)
|++.++++...+++|.++|..+++.+..+.. ...+..+.
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-----------------------------------------g~~p~~v~ 203 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-----------------------------------------GYAVHISR 203 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-----------------------------------------SSCEEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-----------------------------------------CCCccceE
Confidence 4456777788899999999999998866542 22456889
Q ss_pred EcCCCCEEEEeeCCCcEEEEeCC--CCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeC----CCCCeEEEEeCC-C
Q psy12697 230 WNPVKDFLASGSGDSTARIWDMT--DSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWN----NNGSFLATGSYD-G 302 (602)
Q Consensus 230 ~~~~~~~l~s~~~dg~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~~~d-g 302 (602)
|+||++++++++.|+.|.+||+. +.+.. . . .+.......++|+ |||++++++... +
T Consensus 204 ~SpDGr~lyv~~~dg~V~viD~~~~t~~~v-----~----~--------i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~ 266 (567)
T 1qks_A 204 LSASGRYLFVIGRDGKVNMIDLWMKEPTTV-----A----E--------IKIGSEARSIETSKMEGWEDKYAIAGAYWPP 266 (567)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTSSSCCEE-----E----E--------EECCSEEEEEEECCSTTCTTTEEEEEEEETT
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCCcEe-----E----E--------EecCCCCceeEEccccCCCCCEEEEEEccCC
Confidence 99999999999999999999985 33211 0 0 0113456789999 699988877664 8
Q ss_pred eEEEEcCC-Ccceeeccc----------ccC-CeEEEEEccCCCEEE-EEecCCcEEEEeCCCCceeEEeee-ccCCeee
Q psy12697 303 YARIWTSD-GSLKSTLGQ----------HKG-PIFALKWNKRGNYIL-SAGVDKTTIIWDAASGQCEQQFSF-HSAPALD 368 (602)
Q Consensus 303 ~i~i~~~~-~~~~~~~~~----------~~~-~i~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~-~~~~~~~ 368 (602)
.+.++|.. .+.+..+.. |.. .+..+..++++..++ ....+|.|.++|..+.+....... ......+
T Consensus 267 ~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d 346 (567)
T 1qks_A 267 QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHD 346 (567)
T ss_dssp EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEE
T ss_pred eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccC
Confidence 99999965 334333321 222 577888888866544 455679999999887653332222 2334567
Q ss_pred eeccCCCeE--EEeeCCCeEEEEEcCCCceeeEecc-----CCCCeEEEEECCCCCEE-EEEE-CCCeEEEEeCCC----
Q psy12697 369 VDWQSNTSF--ASCSTDQHIHVCKLHSDKPVKSFEG-----HTNEVNAIKWDPQGLLL-ASCS-DDMTLKIWSLDK---- 435 (602)
Q Consensus 369 ~~~~~~~~~--~~~~~~~~i~i~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l-~~~~-~dg~i~iwd~~~---- 435 (602)
+.|++++.+ ++...++.|.++|+.+++.+..+.. |.+.-..+ ++|++..+ +++. .++.|.++|..+
T Consensus 347 ~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~ 425 (567)
T 1qks_A 347 GGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHP 425 (567)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT
T ss_pred ceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCc
Confidence 789998763 3444678999999999987766543 32212122 68875544 4443 468999999887
Q ss_pred ---CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeC-------CCeEE
Q psy12697 436 ---DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGV-------DKTTI 505 (602)
Q Consensus 436 ---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~-------dg~i~ 505 (602)
.+.+.++.... ..-..+..+|++++|.+... ...|.
T Consensus 426 ~~~~kvv~~i~~~g----------------------------------~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~ 471 (567)
T 1qks_A 426 DNAWKILDSFPALG----------------------------------GGSLFIKTHPNSQYLYVDATLNPEAEISGSVA 471 (567)
T ss_dssp TTBTSEEEEEECSC----------------------------------SCCCCEECCTTCSEEEEECTTCSSHHHHTCEE
T ss_pred cccCEEEEEEecCC----------------------------------CCCEEEEeCCCCCeEEEecCCCCCcccCceEE
Confidence 33444433211 11133567889998887652 35899
Q ss_pred EEeCCCC-----ce-eeeec--------ccCCCeeEeeecCCc-eEEEe-e----CCCcEEEeecCCCCceeeeec
Q psy12697 506 IWDAASG-----QC-EQQFS--------FHSAPALDVDWQSNT-SFASC-S----TDQHIHVCKLHSDKPVKSFEG 561 (602)
Q Consensus 506 iwd~~~~-----~~-~~~~~--------~~~~~v~~~~~s~~~-~l~~~-~----~d~~i~iw~~~~~~~~~~~~~ 561 (602)
++|+.+. .. ...+. .....+..+.|+|+| .+..+ . .++.|.|+|.++++.+..++.
T Consensus 472 v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 472 VFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp EEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred EEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence 9999877 21 12222 123468899999999 44433 2 379999999998888777764
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.76 E-value=4.3e-16 Score=149.89 Aligned_cols=256 Identities=12% Similarity=0.086 Sum_probs=174.6
Q ss_pred cceEEEEEcCCCCEEEEee---------CCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCC
Q psy12697 223 SEVFICAWNPVKDFLASGS---------GDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGS 293 (602)
Q Consensus 223 ~~v~~~~~~~~~~~l~s~~---------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 293 (602)
..+...++ ||+.++... .++.|.+|++.+++.. .+ ..+..++|+|||+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~------~l---------------~~~~~~~~SpDg~ 71 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR------FI---------------ENATMPRISPDGK 71 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE------EE---------------ESCEEEEECTTSS
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE------Ec---------------ccCCCeEECCCCC
Confidence 34666777 888777642 2567899998875421 00 2478899999999
Q ss_pred eEEEEeCC---C--eEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecC--------------------------
Q psy12697 294 FLATGSYD---G--YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVD-------------------------- 342 (602)
Q Consensus 294 ~l~~~~~d---g--~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------------------------- 342 (602)
.|+..+.+ + .|.+|++.+.....+..+.. +..+.|+|+|+.|+.++.+
T Consensus 72 ~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 150 (347)
T 2gop_A 72 KIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGE 150 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------C
T ss_pred EEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCc
Confidence 99887754 3 47788887655444444444 9999999999999887643
Q ss_pred -CcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCC---------CeEEEEEcCCCceeeEeccCCCCeEEEEE
Q psy12697 343 -KTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTD---------QHIHVCKLHSDKPVKSFEGHTNEVNAIKW 412 (602)
Q Consensus 343 -g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 412 (602)
..|.+||+.+++.+..+.. . .+..+.|+|++.++++..+ ..|.++| +++ ...+..+ ..+..+
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~-~~~~~~-- 222 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGK-EEKMFEK-VSFYAV-- 222 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTE-EEEEEEE-ESEEEE--
T ss_pred cceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeC--CCc-eEEeccC-cceeeE--
Confidence 5789999998887455544 3 7888999999944444333 2455555 444 3444444 455544
Q ss_pred CCCCCEEEEEECC--------CeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeE
Q psy12697 413 DPQGLLLASCSDD--------MTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIF 484 (602)
Q Consensus 413 ~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 484 (602)
+|+|+.|+.++.+ ..|.+|| +++...... .+...+.
T Consensus 223 spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~----------------------------------~~~~~~~ 266 (347)
T 2gop_A 223 DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD----------------------------------EVDRGVG 266 (347)
T ss_dssp EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST----------------------------------TCCSEEE
T ss_pred CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccc----------------------------------cCCcccC
Confidence 9999999888754 3677777 433322211 2334555
Q ss_pred E-EEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCCceEEEeeCCCcE-EEeecC
Q psy12697 485 A-LKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHI-HVCKLH 551 (602)
Q Consensus 485 ~-i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~l~~~~~d~~i-~iw~~~ 551 (602)
. +.|+ |+ ++++++.++.+++| +.+++..... .+...|.+++|+| ..+++++.++.. .+|.+.
T Consensus 267 ~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~-~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 267 QAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIA-KGRHWIMGFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEE-CSSSEEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred CccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEe-cCCCeEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence 4 7888 88 88999999999999 8866654443 4577899999999 866666666654 777765
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.76 E-value=5.9e-16 Score=145.10 Aligned_cols=249 Identities=12% Similarity=0.078 Sum_probs=180.8
Q ss_pred ceeeeeeeccCCceEEEEECCCCC-eEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccc
Q psy12697 130 GECLNTLTRHTEPVYSVAFSPDGK-FLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASI 208 (602)
Q Consensus 130 ~~~~~~l~~h~~~V~~~~~s~d~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (602)
+..+..+..+.....+++|+|+|+ +++++..++.|..||..++ ...
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~------------------------------- 63 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSP------------------------------- 63 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEE-------------------------------
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEE-------------------------------
Confidence 344556666777889999999998 7888888999999999876 322
Q ss_pred cccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEee
Q psy12697 209 EIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDW 288 (602)
Q Consensus 209 ~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 288 (602)
+..+...+.+++++|+++++++...++.|.+||..+++... ..... .......+..+++
T Consensus 64 ---------~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~------~~~~~------~~~~~~~~~~i~~ 122 (296)
T 3e5z_A 64 ---------EMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWES------IADSF------EGKKLNSPNDVCL 122 (296)
T ss_dssp ---------EESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEE------EECEE------TTEECCCCCCEEE
T ss_pred ---------EECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEE------Eeecc------CCCCCCCCCCEEE
Confidence 22355678899999999988887778899999987664211 10000 0011235678999
Q ss_pred CCCCCeEEE----Ee-------------CCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCC
Q psy12697 289 NNNGSFLAT----GS-------------YDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 351 (602)
Q Consensus 289 ~~~~~~l~~----~~-------------~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~ 351 (602)
+|+|+++++ |+ ..+.|..++..+. ...+..+......++|+|+++.+++.+.++.|.+|++.
T Consensus 123 d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 123 APDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp CTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEECCccccccccccccccccCCCcEEEEECCCCC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 999998887 33 1356777776644 33444566678899999999998777778999999987
Q ss_pred -CCce---eEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEE-CCCCCEEEEEECCC
Q psy12697 352 -SGQC---EQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKW-DPQGLLLASCSDDM 426 (602)
Q Consensus 352 -~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~~~~~dg 426 (602)
+++. ...+......+..+++.+++.+.++. ++.|.+|+.. ++.+..+..+.. +.+++| +|+++.|++++.++
T Consensus 202 ~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 202 ARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp SSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred CCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe
Confidence 5554 22332344456788899998888777 8999999986 777777877777 899999 68999999988864
Q ss_pred eEEEEeCCCCe
Q psy12697 427 TLKIWSLDKDN 437 (602)
Q Consensus 427 ~i~iwd~~~~~ 437 (602)
+.-++..+.+
T Consensus 279 -l~~~~~~~~~ 288 (296)
T 3e5z_A 279 -FWSIETNVRG 288 (296)
T ss_dssp -EEEEECSCCB
T ss_pred -EEEEEccccc
Confidence 5555655543
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.74 E-value=1.3e-15 Score=146.53 Aligned_cols=250 Identities=10% Similarity=0.113 Sum_probs=172.2
Q ss_pred CceeEEeeCCCCCeEEEEe---------CCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecC---C--cEE
Q psy12697 281 KDVTSLDWNNNGSFLATGS---------YDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVD---K--TTI 346 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~---------~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g--~i~ 346 (602)
..+...++ ||+.++... .++.|.+|++.+.....+ ..+..++|+|||++|+.++.+ + .|.
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 45677777 888887653 256799999886555444 568899999999999987754 2 388
Q ss_pred EEeCCCCceeEEeeeccCCeeeeeccCCCe-EEEeeC---------------------------CCeEEEEEcCCCceee
Q psy12697 347 IWDAASGQCEQQFSFHSAPALDVDWQSNTS-FASCST---------------------------DQHIHVCKLHSDKPVK 398 (602)
Q Consensus 347 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------------------------~~~i~i~d~~~~~~~~ 398 (602)
+||+.+++......... +..+.|+|++. ++.++. ...|++||+.+++.+.
T Consensus 89 ~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 166 (347)
T 2gop_A 89 VADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE 166 (347)
T ss_dssp EEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEE
T ss_pred EEECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe
Confidence 88998887665554443 88999999865 555542 2579999999887645
Q ss_pred EeccCCCCeEEEEECCCCCEEEEEECCC-------eEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeee
Q psy12697 399 SFEGHTNEVNAIKWDPQGLLLASCSDDM-------TLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFI 471 (602)
Q Consensus 399 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg-------~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 471 (602)
.+.. . .+..++|+|+| +++++..++ ...||.+++++. ..+..
T Consensus 167 ~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~--------------------------- 215 (347)
T 2gop_A 167 EFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFE--------------------------- 215 (347)
T ss_dssp EEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEE---------------------------
T ss_pred eecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEecc---------------------------
Confidence 5544 3 78899999999 877776542 334444333332 22211
Q ss_pred eeeccCCccCCeEEEEEccCCCEEEEEeCC--------CeEEEEeCCCCceeeeecccCCCeeE-eeecCCceEEEeeCC
Q psy12697 472 LKSTLGQHKGPIFALKWNKRGNYILSAGVD--------KTTIIWDAASGQCEQQFSFHSAPALD-VDWQSNTSFASCSTD 542 (602)
Q Consensus 472 ~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~v~~-~~~s~~~~l~~~~~d 542 (602)
+ ..+..+ +|||++|+.++.+ ..|.+|| +++.......+...+.. +.|+ |+.+++++.+
T Consensus 216 -------~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg~~~~~~~~ 282 (347)
T 2gop_A 216 -------K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GKVYFTLFEE 282 (347)
T ss_dssp -------E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TEEEEEEEET
T ss_pred -------C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-CcEEEEEecC
Confidence 1 122233 7899988877754 4688888 66666656666777886 8999 8877788899
Q ss_pred CcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCe
Q psy12697 543 QHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGS 597 (602)
Q Consensus 543 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~ 597 (602)
+.+++| +.+++.... ....+.|.+++|+| .++++++.++.
T Consensus 283 ~~~~l~-~~~g~~~~~------------~~~~~~v~~~~~s~--~~~~~~~~~~~ 322 (347)
T 2gop_A 283 GSVNLY-IWDGEIKPI------------AKGRHWIMGFDVDE--IVVYLKETATR 322 (347)
T ss_dssp TEEEEE-EESSSEEEE------------ECSSSEEEEEEESS--SEEEEEECSSS
T ss_pred CcEEEE-EcCCceEEE------------ecCCCeEEeeeeeC--cEEEEEcCCCC
Confidence 999999 864433221 22246689999999 67777776664
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.74 E-value=2.9e-15 Score=140.37 Aligned_cols=235 Identities=12% Similarity=0.054 Sum_probs=165.9
Q ss_pred eecccccCCeEEEEEccCCC-EEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeC-CCeEEEEEcC
Q psy12697 315 STLGQHKGPIFALKWNKRGN-YILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCST-DQHIHVCKLH 392 (602)
Q Consensus 315 ~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~d~~ 392 (602)
..+..+.....+++|+|+++ .++++..++.|..||..++ ...+..+...+..+++.+++.++++.. ++.|.+||..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 34444556678999999998 6777888999999999887 566666677788999999887776665 5899999998
Q ss_pred CCceeeEeccC----CCCeEEEEECCCCCEEEEEEC-----------------CCeEEEEeCCCCeeeEeeccccccEEE
Q psy12697 393 SDKPVKSFEGH----TNEVNAIKWDPQGLLLASCSD-----------------DMTLKIWSLDKDNCVHDLQAHNKEIYT 451 (602)
Q Consensus 393 ~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~-----------------dg~i~iwd~~~~~~~~~~~~~~~~i~~ 451 (602)
+++........ ...+..++++|+|+++++.+. .+.|..++.. ++. ..+.
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~-------- 168 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPI-------- 168 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEE--------
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEee--------
Confidence 87754333221 234678999999998887431 2345555443 221 1111
Q ss_pred EEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCC-CCce---eeeecccCCCeeE
Q psy12697 452 IKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA-SGQC---EQQFSFHSAPALD 527 (602)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~-~~~~---~~~~~~~~~~v~~ 527 (602)
.+......++|+|+|+++++.+.++.|.+||+. +++. ...+..+...+..
T Consensus 169 --------------------------~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~ 222 (296)
T 3e5z_A 169 --------------------------RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDG 222 (296)
T ss_dssp --------------------------CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCS
T ss_pred --------------------------cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCe
Confidence 123345678899999988777778999999986 5554 2333334556788
Q ss_pred eeecCCceEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEE-CCCCCeEEEeccCCeEEee
Q psy12697 528 VDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCW-NSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 528 ~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~-spdg~~l~~~~~dg~v~i~ 601 (602)
++++++|.|.++. ++.|.+|+.. ++.+..+..+ ..+.+++| +||++.|++++.++..+++
T Consensus 223 i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~~~~------------~~~~~~~f~~~d~~~L~v~t~~~l~~~~ 283 (296)
T 3e5z_A 223 LRVDAGGLIWASA-GDGVHVLTPD-GDELGRVLTP------------QTTSNLCFGGPEGRTLYMTVSTEFWSIE 283 (296)
T ss_dssp EEEBTTSCEEEEE-TTEEEEECTT-SCEEEEEECS------------SCCCEEEEESTTSCEEEEEETTEEEEEE
T ss_pred EEECCCCCEEEEc-CCeEEEECCC-CCEEEEEECC------------CCceeEEEECCCCCEEEEEcCCeEEEEE
Confidence 9999999444444 8899999964 4444333322 22888999 6999999999999988875
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.73 E-value=9.3e-16 Score=161.62 Aligned_cols=243 Identities=9% Similarity=0.007 Sum_probs=165.2
Q ss_pred CCCcceEEEEEcCCCCEEEE-----eeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 220 GHESEVFICAWNPVKDFLAS-----GSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 220 ~h~~~v~~~~~~~~~~~l~s-----~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
+|...+..++|||||++|+. |+.+..|++||+.+++....... . ......++|+|||+.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~---------------~-~~~~~~~~wspDg~~ 181 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI---------------E-GGKYATPKWTPDSKG 181 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB---------------S-CCTTCCCEECTTSSE
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc---------------C-cccccceEEecCCCE
Confidence 46667899999999999983 44457899999998764310000 0 111268999999999
Q ss_pred EEEEeCCCe-------------EEEEcCCCcc-----eeecccccCCeEEEEEccCCCEEEEEecCC----cEEEEeCCC
Q psy12697 295 LATGSYDGY-------------ARIWTSDGSL-----KSTLGQHKGPIFALKWNKRGNYILSAGVDK----TTIIWDAAS 352 (602)
Q Consensus 295 l~~~~~dg~-------------i~i~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~~wd~~~ 352 (602)
|+.++.+.. |++|++.+.. +.....+...+..+.|+|||++|+.++.++ .|.+|+..+
T Consensus 182 l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~ 261 (695)
T 2bkl_A 182 FYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE 261 (695)
T ss_dssp EEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC
T ss_pred EEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC
Confidence 999988765 9999987432 223334556789999999999998877666 677777665
Q ss_pred CceeEEeeeccCCeeeeeccCCCeEEEeeC----CCeEEEEEcCCCce--eeEeccC--CCCeEEEEECCCCCEEEEEEC
Q psy12697 353 GQCEQQFSFHSAPALDVDWQSNTSFASCST----DQHIHVCKLHSDKP--VKSFEGH--TNEVNAIKWDPQGLLLASCSD 424 (602)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~i~d~~~~~~--~~~~~~~--~~~i~~~~~~~~~~~l~~~~~ 424 (602)
++. ..+..+........+.+++ ++..+. ++.|.+||+.+++. ...+..+ ...+..++++ ++.++++...
T Consensus 262 ~~~-~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~ 338 (695)
T 2bkl_A 262 KDF-RLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLK 338 (695)
T ss_dssp SSC-EEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEE
T ss_pred Cce-EEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEE
Confidence 543 3444444455555565555 555554 57899999987753 2333333 4458888888 7788899999
Q ss_pred CCeEEEEeCC-CCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE----e
Q psy12697 425 DMTLKIWSLD-KDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA----G 499 (602)
Q Consensus 425 dg~i~iwd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~----~ 499 (602)
|+..+||.+. +++....+..+ ..+.+..+.++|+++.++.. .
T Consensus 339 dg~~~l~~~~~~g~~~~~l~~~---------------------------------~~~~v~~~~~s~d~~~l~~~~ss~~ 385 (695)
T 2bkl_A 339 DATSEVRVATLKGKPVRTVQLP---------------------------------GVGAASNLMGLEDLDDAYYVFTSFT 385 (695)
T ss_dssp TTEEEEEEEETTCCEEEECCCS---------------------------------SSSEECCCBSCTTCSEEEEEEEETT
T ss_pred CCEEEEEEEeCCCCeeEEecCC---------------------------------CCeEEEEeecCCCCCEEEEEEcCCC
Confidence 9988888654 33333333221 13345566677788766633 3
Q ss_pred CCCeEEEEeCCCCce
Q psy12697 500 VDKTTIIWDAASGQC 514 (602)
Q Consensus 500 ~dg~i~iwd~~~~~~ 514 (602)
..++|++||+.+++.
T Consensus 386 ~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 386 TPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEEEEEEETTTCCE
T ss_pred CCCEEEEEECCCCcE
Confidence 357899999998874
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.72 E-value=1.7e-14 Score=137.74 Aligned_cols=250 Identities=12% Similarity=0.112 Sum_probs=176.6
Q ss_pred ccceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCC
Q psy12697 119 RLTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNP 198 (602)
Q Consensus 119 ~~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (602)
+..++.| .++....+..+...+.+++|+|+|++++++..++.|.+||..+++.....
T Consensus 26 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~-------------------- 82 (333)
T 2dg1_A 26 ESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF-------------------- 82 (333)
T ss_dssp GGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE--------------------
T ss_pred cccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe--------------------
Confidence 4577888 56677788888888999999999998888889999999999887754321
Q ss_pred CCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCC----CcEEEEeCCCCCCCCCccceEEEEEEecCCC
Q psy12697 199 PESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGD----STARIWDMTDSTKKDPKELQIVLRHCISKGG 274 (602)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (602)
..+...+.+++|+|+++++++...+ +.|.+||..++.... . ...
T Consensus 83 --------------------~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~------~----~~~-- 130 (333)
T 2dg1_A 83 --------------------VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQD------I----IED-- 130 (333)
T ss_dssp --------------------ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEE------E----ECS--
T ss_pred --------------------eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEE------E----Ecc--
Confidence 1245679999999999988877666 689999987654310 0 000
Q ss_pred cccCCCCceeEEeeCCCCCeEEEEeC------CCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEE-ecCCcEEE
Q psy12697 275 TEVPSNKDVTSLDWNNNGSFLATGSY------DGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTII 347 (602)
Q Consensus 275 ~~~~~~~~i~~~~~~~~~~~l~~~~~------dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~ 347 (602)
......+.+++++|+|+++++... .+.|..++.++.....+......+..++|+|+++.|+.+ +.++.|.+
T Consensus 131 --~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~ 208 (333)
T 2dg1_A 131 --LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHR 208 (333)
T ss_dssp --SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEE
T ss_pred --CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEE
Confidence 012356899999999987776653 356777777654444443444568899999999866544 56789999
Q ss_pred EeCCC-CceeEEe------eec-cCCeeeeeccCCCeEEEee-CCCeEEEEEcCCCceeeEeccCCC------CeEEEEE
Q psy12697 348 WDAAS-GQCEQQF------SFH-SAPALDVDWQSNTSFASCS-TDQHIHVCKLHSDKPVKSFEGHTN------EVNAIKW 412 (602)
Q Consensus 348 wd~~~-~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~-~~~~i~i~d~~~~~~~~~~~~~~~------~i~~~~~ 412 (602)
||..+ +.....+ ... ...+..+++.+++.+.++. .++.|.+||. +++.+..+..+.. .+.+++|
T Consensus 209 ~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~ 287 (333)
T 2dg1_A 209 IALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQF 287 (333)
T ss_dssp EEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEE
T ss_pred EEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEE
Confidence 99864 3332211 111 1356678888887766554 5689999998 4666666654433 6899999
Q ss_pred CCCCCEEEEEECCC
Q psy12697 413 DPQGLLLASCSDDM 426 (602)
Q Consensus 413 ~~~~~~l~~~~~dg 426 (602)
+|+++.|+.++.++
T Consensus 288 ~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 288 IPGTNQLIICSNDI 301 (333)
T ss_dssp CTTSCEEEEEEECG
T ss_pred CCCCCEEEEEeCcc
Confidence 99987777666553
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.71 E-value=2.6e-15 Score=158.71 Aligned_cols=246 Identities=10% Similarity=0.001 Sum_probs=173.1
Q ss_pred ccCCceEEEEECCCCCeEEEeeCCc-----eEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccC
Q psy12697 138 RHTEPVYSVAFSPDGKFLASGSFDK-----CVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQ 212 (602)
Q Consensus 138 ~h~~~V~~~~~s~d~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (602)
+|...+..++|||||++||.++.++ .|++||+.+|+.+....
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~--------------------------------- 168 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL--------------------------------- 168 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE---------------------------------
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc---------------------------------
Confidence 3555789999999999999776533 89999999998764211
Q ss_pred CcceEeeCCCcceEEEEEcCCCCEEEEeeCCCc----------------EEEEeCCCCCCCCCccceEEEEEEecCCCcc
Q psy12697 213 SKATKLIGHESEVFICAWNPVKDFLASGSGDST----------------ARIWDMTDSTKKDPKELQIVLRHCISKGGTE 276 (602)
Q Consensus 213 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~----------------i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (602)
....+..++|+||++.|+.++.++. |.+|++.++..... ... ..
T Consensus 169 --------~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~----~v~--------~~ 228 (710)
T 2xdw_A 169 --------ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDI----LCA--------EF 228 (710)
T ss_dssp --------EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCE----EEE--------CC
T ss_pred --------cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccce----EEe--------cc
Confidence 1112567899999999999888766 99999976542110 000 00
Q ss_pred cCCCCceeEEeeCCCCCeEEEEeC-----CCeEEEEcCCC------c--ceeecccccCCeEEEEEccCCCEEEEEecC-
Q psy12697 277 VPSNKDVTSLDWNNNGSFLATGSY-----DGYARIWTSDG------S--LKSTLGQHKGPIFALKWNKRGNYILSAGVD- 342 (602)
Q Consensus 277 ~~~~~~i~~~~~~~~~~~l~~~~~-----dg~i~i~~~~~------~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d- 342 (602)
..+...+..+.|+|||++|+.++. +..|.+||+.+ . ....+..+...+.. .|+|+|+.|+..+..
T Consensus 229 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~ 307 (710)
T 2xdw_A 229 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRH 307 (710)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTT
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCC
Confidence 112344778999999999988765 56899999864 2 34555556655554 488999988776653
Q ss_pred ---CcEEEEeCCCCce--eEEeeeccC--CeeeeeccCCCe-EEEeeCCC--eEEEEEcCCCceeeEeccCCCCeEEEEE
Q psy12697 343 ---KTTIIWDAASGQC--EQQFSFHSA--PALDVDWQSNTS-FASCSTDQ--HIHVCKLHSDKPVKSFEGHTNEVNAIKW 412 (602)
Q Consensus 343 ---g~i~~wd~~~~~~--~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 412 (602)
+.|.+||+.++.. ...+..+.. .+..+.|++++. +++...++ .|++|++.+++.+..+..+...+..+++
T Consensus 308 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~ 387 (710)
T 2xdw_A 308 SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSG 387 (710)
T ss_dssp CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEec
Confidence 3699999987742 233433333 567788885554 55666676 4667788778877888878788999999
Q ss_pred CCCCCEEEEE-E---CCCeEEEEeCCCCe
Q psy12697 413 DPQGLLLASC-S---DDMTLKIWSLDKDN 437 (602)
Q Consensus 413 ~~~~~~l~~~-~---~dg~i~iwd~~~~~ 437 (602)
+|+++.++.. + ..+.|.+||+.+++
T Consensus 388 s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 388 QKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp CTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 9998766644 2 34789999998766
No 188
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.71 E-value=2.9e-13 Score=126.99 Aligned_cols=271 Identities=7% Similarity=0.005 Sum_probs=188.4
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeec-ccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEe
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTL-GQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF 359 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 359 (602)
..+.++++.++|+++++...++.|..|+..+...... ..+...+..++++++++.+++...++.|..||.. ++. ..+
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~ 92 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEY 92 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEE
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEE
Confidence 5689999999999777766688999999884433221 2345678999999999987777768889999976 332 223
Q ss_pred e--eccCCeeeeeccCCCeEEEee-CCCeEEEEEcCCCceee-EeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCC
Q psy12697 360 S--FHSAPALDVDWQSNTSFASCS-TDQHIHVCKLHSDKPVK-SFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDK 435 (602)
Q Consensus 360 ~--~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 435 (602)
. .....+..+.+.+++.+.++. .++.|..||. +++... ....+...+..++++++|+++++...++.|..||. +
T Consensus 93 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~ 170 (299)
T 2z2n_A 93 TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-S 170 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T
T ss_pred eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C
Confidence 2 234467888888877766654 5789999998 554332 22334567899999999988887777789999998 5
Q ss_pred CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee
Q psy12697 436 DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE 515 (602)
Q Consensus 436 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 515 (602)
++.... .. ......+..++++++|++.++...++.|.+||. +++..
T Consensus 171 g~~~~~-~~--------------------------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 216 (299)
T 2z2n_A 171 GDITEF-KI--------------------------------PTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT 216 (299)
T ss_dssp CCEEEE-EC--------------------------------SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CcEEEe-eC--------------------------------CCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE
Confidence 543221 00 012234667888889887777767889999999 66644
Q ss_pred ee-ecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEec
Q psy12697 516 QQ-FSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASA 593 (602)
Q Consensus 516 ~~-~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~ 593 (602)
.. ...+...+.+++++++| .+++...++.|..||. +++ +..+... .....+.++++ ++|.+.++..
T Consensus 217 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~~~~~---------~~~~~~~~i~~-~~g~l~v~~~ 284 (299)
T 2z2n_A 217 EFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI-IEEYPIQ---------IKSAEPHGICF-DGETIWFAME 284 (299)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTE-EEEEECS---------SSSCCEEEEEE-CSSCEEEEET
T ss_pred EEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCc-eEEEeCC---------CCCCccceEEe-cCCCEEEEec
Confidence 32 23345678899999999 5555557789999997 332 2222111 01256889999 9998877766
Q ss_pred cCCeEEee
Q psy12697 594 SDGSVFKN 601 (602)
Q Consensus 594 ~dg~v~i~ 601 (602)
.++.++++
T Consensus 285 ~~~l~~~~ 292 (299)
T 2z2n_A 285 CDKIGKLT 292 (299)
T ss_dssp TTEEEEEE
T ss_pred CCcEEEEE
Confidence 67776664
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.70 E-value=8.3e-15 Score=154.86 Aligned_cols=241 Identities=11% Similarity=0.088 Sum_probs=164.9
Q ss_pred CCcceEEEEEcCCCCEEEEeeCCC-----cEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeE
Q psy12697 221 HESEVFICAWNPVKDFLASGSGDS-----TARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFL 295 (602)
Q Consensus 221 h~~~v~~~~~~~~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 295 (602)
|...+..++|||||++|+.+..++ .|++||+.+++... .... ...+..++|+|||+.|
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~-----~~~~------------~~~~~~~~wspDg~~l 185 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELP-----DVLE------------RVKFSCMAWTHDGKGM 185 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEE-----EEEE------------EECSCCEEECTTSSEE
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCc-----cccc------------CcccceEEEEeCCCEE
Confidence 445688999999999998776543 89999998875321 1111 1226789999999999
Q ss_pred EEEeCCCe----------------EEEEcCCCcc---eee--cccccCCeEEEEEccCCCEEEEEec-----CCcEEEEe
Q psy12697 296 ATGSYDGY----------------ARIWTSDGSL---KST--LGQHKGPIFALKWNKRGNYILSAGV-----DKTTIIWD 349 (602)
Q Consensus 296 ~~~~~dg~----------------i~i~~~~~~~---~~~--~~~~~~~i~~~~~~~~~~~l~~~~~-----dg~i~~wd 349 (602)
+.+..++. |++|++.+.. ... ...+...+..+.|+|||++|+..+. +..|.+||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d 265 (710)
T 2xdw_A 186 FYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCD 265 (710)
T ss_dssp EEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEE
T ss_pred EEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEE
Confidence 99888765 9999987433 122 2234556889999999999987765 56899999
Q ss_pred CCC------Cc-eeEEeeeccCCeeeeeccC-CCeEEEeeC----CCeEEEEEcCCCce--eeEeccCCC--CeEEEEEC
Q psy12697 350 AAS------GQ-CEQQFSFHSAPALDVDWQS-NTSFASCST----DQHIHVCKLHSDKP--VKSFEGHTN--EVNAIKWD 413 (602)
Q Consensus 350 ~~~------~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~i~i~d~~~~~~--~~~~~~~~~--~i~~~~~~ 413 (602)
+.+ +. ....+..+....... |++ ++.++..+. ++.|.+||+.++.. ...+..|.. .+..++|+
T Consensus 266 ~~~~~~~~~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~ 344 (710)
T 2xdw_A 266 LQQESNGITGILKWVKLIDNFEGEYDY-VTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV 344 (710)
T ss_dssp GGGSSSSSCSSCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE
T ss_pred CcccccccCCccceEEeeCCCCcEEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE
Confidence 976 43 344555554444443 444 455555544 34699999987742 345555544 68889999
Q ss_pred CCCCEEEEEECCCe--EEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccC
Q psy12697 414 PQGLLLASCSDDMT--LKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKR 491 (602)
Q Consensus 414 ~~~~~l~~~~~dg~--i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~ 491 (602)
+++.++++...|+. |.+|++.+++.+..+..+. +.+..+.++|+
T Consensus 345 ~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~----------------------------------~~v~~~~~s~d 390 (710)
T 2xdw_A 345 RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEV----------------------------------GSVVGYSGQKK 390 (710)
T ss_dssp TTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCS----------------------------------SEEEEEECCTT
T ss_pred cCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCC----------------------------------ceEEEEecCCC
Confidence 88888888888885 5667776666555554433 34455566667
Q ss_pred CCEEEEE-e---CCCeEEEEeCCCCc
Q psy12697 492 GNYILSA-G---VDKTTIIWDAASGQ 513 (602)
Q Consensus 492 ~~~l~s~-~---~dg~i~iwd~~~~~ 513 (602)
++.++.. + ..++|+.||+.+++
T Consensus 391 ~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 391 DTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp CSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 6655533 2 35789999999887
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.70 E-value=2.6e-13 Score=127.29 Aligned_cols=284 Identities=8% Similarity=0.027 Sum_probs=194.4
Q ss_pred eeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcc
Q psy12697 136 LTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKA 215 (602)
Q Consensus 136 l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (602)
+..+...+.+++++++|+++++...++.|.+||.. ++.. .+.
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~------------------------------------ 51 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYP------------------------------------ 51 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEE------------------------------------
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-Eec------------------------------------
Confidence 34556789999999999988877778999999987 5432 111
Q ss_pred eEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeE
Q psy12697 216 TKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFL 295 (602)
Q Consensus 216 ~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 295 (602)
+..+...+..+++.+++.++++...++.|..|+.. +. ... ... . .....+.++++.+++.++
T Consensus 52 --~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~------~~~---~~~-~-----~~~~~~~~i~~~~~g~l~ 113 (299)
T 2z2n_A 52 --LPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI------IKE---YTL-P-----NPDSAPYGITEGPNGDIW 113 (299)
T ss_dssp --CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC------EEE---EEC-S-----STTCCEEEEEECTTSCEE
T ss_pred --CCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc------EEE---EeC-C-----CcCCCceeeEECCCCCEE
Confidence 11234568899999999988887778889999875 21 110 000 0 123568899999999888
Q ss_pred EEEeCCCeEEEEcCCCcceee-cccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEE-eeeccCCeeeeeccC
Q psy12697 296 ATGSYDGYARIWTSDGSLKST-LGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ-FSFHSAPALDVDWQS 373 (602)
Q Consensus 296 ~~~~~dg~i~i~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~~ 373 (602)
++...++.|..|+..+..... .......+..+++.++++.+++...++.|..||. +++.... .......+..+++.+
T Consensus 114 v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~ 192 (299)
T 2z2n_A 114 FTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGN 192 (299)
T ss_dssp EEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT
T ss_pred EEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECC
Confidence 877778899999986544432 2234567899999999987777767789999998 6665432 222344577888888
Q ss_pred CCeEEEee-CCCeEEEEEcCCCceeeE-eccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEE
Q psy12697 374 NTSFASCS-TDQHIHVCKLHSDKPVKS-FEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYT 451 (602)
Q Consensus 374 ~~~~~~~~-~~~~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~ 451 (602)
++.+.++. .++.|.+||. +++.... ...+...+.+++++++|+++++...++.|..||. +++. ..+..
T Consensus 193 ~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~-~~~~~------- 262 (299)
T 2z2n_A 193 DDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNII-EEYPI------- 262 (299)
T ss_dssp TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEE-EEEEC-------
T ss_pred CCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCce-EEEeC-------
Confidence 77666665 4788999999 6553322 3334567999999999987776667789999998 3432 22210
Q ss_pred EEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCc
Q psy12697 452 IKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ 513 (602)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~ 513 (602)
..+...+.++++ ++|++.++.. .+.+..+|..+++
T Consensus 263 -------------------------~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 263 -------------------------QIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp -------------------------SSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred -------------------------CCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 012345667777 7887776655 5667778776543
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.70 E-value=3e-14 Score=135.13 Aligned_cols=269 Identities=6% Similarity=-0.044 Sum_probs=185.2
Q ss_pred CCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-Ccceeecccc
Q psy12697 242 GDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GSLKSTLGQH 320 (602)
Q Consensus 242 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~ 320 (602)
.++.|.++|.++++......... . ..+.......+.+. +++.+++...++.|.+||.. ++....+. .
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~--------n--~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~ 82 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRA--------N--GFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-G 82 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHH--------H--SSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-C
T ss_pred CCceEEEEECCCCEEhhhhHhhh--------c--CcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-C
Confidence 37899999998875432211000 0 00112345667764 34555666667999999987 55555553 3
Q ss_pred cCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeecc-----CCeeeeeccCCCeEEEee--CCCeEEEEEcCC
Q psy12697 321 KGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS-----APALDVDWQSNTSFASCS--TDQHIHVCKLHS 393 (602)
Q Consensus 321 ~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~i~i~d~~~ 393 (602)
......++++++++..++...++.|.+||..+++....+.... .....+++ .++.++++. .++.|.++|..+
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t 161 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTET 161 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTT
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCC
Confidence 4678899999998544444378999999999998887776543 13445666 456655555 488999999999
Q ss_pred CceeeEeccCCCCeEEEEECCCCCEEEEEECC----------CeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCC
Q psy12697 394 DKPVKSFEGHTNEVNAIKWDPQGLLLASCSDD----------MTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSN 463 (602)
Q Consensus 394 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 463 (602)
++.+..+... .....++++|+|++++++..+ +.|.++|..+++....+....
T Consensus 162 ~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~----------------- 223 (328)
T 3dsm_A 162 DKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL----------------- 223 (328)
T ss_dssp TEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-----------------
T ss_pred CeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-----------------
Confidence 9887777643 346789999999977777654 789999998887665543211
Q ss_pred CCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeee--ecccCCCeeEeeecCCc--eEEEe
Q psy12697 464 PNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ--FSFHSAPALDVDWQSNT--SFASC 539 (602)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~~v~~~~~s~~~--~l~~~ 539 (602)
......++|+|++++|.++.. .|.+||..+++.... +.........++++|++ .+++.
T Consensus 224 ----------------g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 224 ----------------GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp ----------------TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred ----------------CCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 124567888888888887754 899999998876421 22224568899999954 45554
Q ss_pred ----eCCCcEEEeecCCCCceeeee
Q psy12697 540 ----STDQHIHVCKLHSDKPVKSFE 560 (602)
Q Consensus 540 ----~~d~~i~iw~~~~~~~~~~~~ 560 (602)
..++.|.+||.. ++.+.+++
T Consensus 286 ~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 286 AIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp CTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred ccccccCCEEEEECCC-CCEEEEEE
Confidence 568899999987 77766664
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.70 E-value=9.7e-16 Score=161.49 Aligned_cols=247 Identities=14% Similarity=0.050 Sum_probs=169.6
Q ss_pred ccCCceEEEEECCCCCeEE-----EeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccC
Q psy12697 138 RHTEPVYSVAFSPDGKFLA-----SGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQ 212 (602)
Q Consensus 138 ~h~~~V~~~~~s~d~~~l~-----s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (602)
+|...+..++|||||++|| .|+.+..|++||+.+|+.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~----------------------------------- 162 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV----------------------------------- 162 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS-----------------------------------
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC-----------------------------------
Confidence 4666899999999999999 455567999999999875310
Q ss_pred CcceEeeCCCcceEEEEEcCCCCEEEEeeCCCc-------------EEEEeCCCCCCCCCccceEEEEEEecCCCcccCC
Q psy12697 213 SKATKLIGHESEVFICAWNPVKDFLASGSGDST-------------ARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPS 279 (602)
Q Consensus 213 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~-------------i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (602)
..+... ....++|+|||+.|+.++.|.. |++|++.++..... ... ....+
T Consensus 163 ---~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~----lv~--------~~~~~ 225 (695)
T 2bkl_A 163 ---DVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDT----VVH--------ERTGD 225 (695)
T ss_dssp ---CCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCE----EEE--------CCCCC
T ss_pred ---cccCcc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhce----EEE--------ecCCC
Confidence 000001 1156899999999999988776 99999987642110 000 00112
Q ss_pred CCceeEEeeCCCCCeEEEEeCCC----eEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEec----CCcEEEEeCC
Q psy12697 280 NKDVTSLDWNNNGSFLATGSYDG----YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV----DKTTIIWDAA 351 (602)
Q Consensus 280 ~~~i~~~~~~~~~~~l~~~~~dg----~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~i~~wd~~ 351 (602)
...+..+.|+|||++|+.++.++ .|.+|+..+.....+..+...+....+ +++. ++..+. ++.|.+||+.
T Consensus 226 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 226 PTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp TTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTT
T ss_pred CEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCC
Confidence 34678999999999999887766 788887654445555556666666666 6666 554443 5789999998
Q ss_pred CCce---eEEeeec-cCCeeeeeccCCCeEEEeeCCCeEEEEEcC-CCceeeEeccC-CCCeEEEEECCCCCEEEEEE--
Q psy12697 352 SGQC---EQQFSFH-SAPALDVDWQSNTSFASCSTDQHIHVCKLH-SDKPVKSFEGH-TNEVNAIKWDPQGLLLASCS-- 423 (602)
Q Consensus 352 ~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~-~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~-- 423 (602)
++.. ...+..+ ...+..+.++.+..+++...++..++|.+. +++....+..+ ...+..++++|+++.++...
T Consensus 304 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss 383 (695)
T 2bkl_A 304 KPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTS 383 (695)
T ss_dssp BCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEE
T ss_pred CCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcC
Confidence 7753 2333323 445677888866677888888888777654 35555666555 56688889999998777433
Q ss_pred --CCCeEEEEeCCCCee
Q psy12697 424 --DDMTLKIWSLDKDNC 438 (602)
Q Consensus 424 --~dg~i~iwd~~~~~~ 438 (602)
..++|++||+.+++.
T Consensus 384 ~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 384 FTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TTEEEEEEEEETTTCCE
T ss_pred CCCCCEEEEEECCCCcE
Confidence 347899999987653
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.68 E-value=1.2e-14 Score=137.85 Aligned_cols=268 Identities=12% Similarity=0.039 Sum_probs=181.5
Q ss_pred eccceeeeecccceeeeeee------ccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCC
Q psy12697 118 HRLTLPLWDVERGECLNTLT------RHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNS 191 (602)
Q Consensus 118 ~~~~i~vwd~~~~~~~~~l~------~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 191 (602)
.+++|.++|.++++....+. ........+.+. ++++.++...++.|.+||..+++.+.++.
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~------------ 81 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT------------ 81 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE------------
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC------------
Confidence 36789999999999877652 122446778774 45566666678999999999999886553
Q ss_pred CCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEec
Q psy12697 192 RGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCIS 271 (602)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~ 271 (602)
.......++++++++..++...++.|.+||..+++.... +.
T Consensus 82 -----------------------------~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~----------i~ 122 (328)
T 3dsm_A 82 -----------------------------GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGY----------IE 122 (328)
T ss_dssp -----------------------------CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEE----------EE
T ss_pred -----------------------------CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEE----------EE
Confidence 234567888988885444444789999999987643210 00
Q ss_pred CCCcccCCCCceeEEeeCCCCCeEEEEe--CCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecC------
Q psy12697 272 KGGTEVPSNKDVTSLDWNNNGSFLATGS--YDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVD------ 342 (602)
Q Consensus 272 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------ 342 (602)
.. ...........+++ . +..++++. .++.|.++|.. ++....+.. ......+.++|+|++++++..+
T Consensus 123 ~g-~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~ 198 (328)
T 3dsm_A 123 CP-DMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPY 198 (328)
T ss_dssp CT-TCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSS
T ss_pred cC-CccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCcc
Confidence 00 00000114456666 3 44455544 48899999987 444444433 3345688999999877666544
Q ss_pred ----CcEEEEeCCCCceeEEeeec-cCCeeeeeccCCCe-EEEeeCCCeEEEEEcCCCceeeE--eccCCCCeEEEEECC
Q psy12697 343 ----KTTIIWDAASGQCEQQFSFH-SAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKS--FEGHTNEVNAIKWDP 414 (602)
Q Consensus 343 ----g~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~ 414 (602)
+.|.++|..+++....+... ......+++++++. ++++.. .|.+||..+++.... +.........++++|
T Consensus 199 ~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp 276 (328)
T 3dsm_A 199 GYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNP 276 (328)
T ss_dssp CBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECT
T ss_pred ccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcC
Confidence 78999999999887777643 23678899998654 444433 999999988775321 222245688999999
Q ss_pred -CCCEEEEE----ECCCeEEEEeCCCCeeeEeecc
Q psy12697 415 -QGLLLASC----SDDMTLKIWSLDKDNCVHDLQA 444 (602)
Q Consensus 415 -~~~~l~~~----~~dg~i~iwd~~~~~~~~~~~~ 444 (602)
++.++++. ..++.|.+||.. ++.+.++..
T Consensus 277 ~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~ 310 (328)
T 3dsm_A 277 NNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV 310 (328)
T ss_dssp TTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE
T ss_pred CCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe
Confidence 55555665 568999999998 888877753
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.68 E-value=2.1e-14 Score=131.84 Aligned_cols=235 Identities=15% Similarity=0.119 Sum_probs=173.2
Q ss_pred CCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCC-cceEEE
Q psy12697 150 PDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHE-SEVFIC 228 (602)
Q Consensus 150 ~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~-~~v~~~ 228 (602)
..+++|++++.|+.|.+||.++|+.+.++.. +. ..+.++
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~----------------------------------------~~~~~~~~~ 42 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPL----------------------------------------EKGWECNSV 42 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEEC----------------------------------------CTTCCCCEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCC----------------------------------------CccCCCcCe
Confidence 3468999999999999999999999876642 22 356788
Q ss_pred EEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeC-CCeEEEE
Q psy12697 229 AWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSY-DGYARIW 307 (602)
Q Consensus 229 ~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~ 307 (602)
.++|+|++++ +.++.|..||. +++....... +....+.++.+.++|+.+++.+. ++.+..+
T Consensus 43 ~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~---------------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~v 104 (276)
T 3no2_A 43 AATKAGEILF--SYSKGAKMITR-DGRELWNIAA---------------PAGCEMQTARILPDGNALVAWCGHPSTILEV 104 (276)
T ss_dssp EECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC---------------CTTCEEEEEEECTTSCEEEEEESTTEEEEEE
T ss_pred EECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC---------------CCCccccccEECCCCCEEEEecCCCCEEEEE
Confidence 8999999888 34678999988 5543211110 11245788999999999999887 8889889
Q ss_pred cCCCcceeecc------cccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCC-eEEEe
Q psy12697 308 TSDGSLKSTLG------QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASC 380 (602)
Q Consensus 308 ~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 380 (602)
+.+++.+..+. .+......+++.++|+++++...++.|..||.. |+.+..+..... +..+...+++ .++++
T Consensus 105 d~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~-~~~~~~~~~g~~~v~~ 182 (276)
T 3no2_A 105 NMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGT-PFSSAFLDNGDCLVAC 182 (276)
T ss_dssp CTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSC-CCEEEECTTSCEEEEC
T ss_pred eCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCC-ccceeEcCCCCEEEEe
Confidence 98887765543 222345566789999999999999999999988 999988876533 4445556654 56666
Q ss_pred eCCCeEEEEEcCCCceeeEeccCC------CCeEEEEECCCCCEEEEEECC--------CeEEEEeC-CCCeeeEeecc
Q psy12697 381 STDQHIHVCKLHSDKPVKSFEGHT------NEVNAIKWDPQGLLLASCSDD--------MTLKIWSL-DKDNCVHDLQA 444 (602)
Q Consensus 381 ~~~~~i~i~d~~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~~~~~d--------g~i~iwd~-~~~~~~~~~~~ 444 (602)
..++.|..+|..+++.+.++..+. ..+..++..++|.++++.... +..+++++ .+++.+.++..
T Consensus 183 ~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~ 261 (276)
T 3no2_A 183 GDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLND 261 (276)
T ss_dssp BTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECC
T ss_pred CCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecC
Confidence 677789999999999988886432 237889999999998887521 23356665 46777766654
No 195
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.67 E-value=6.8e-14 Score=131.94 Aligned_cols=297 Identities=13% Similarity=0.072 Sum_probs=194.6
Q ss_pred EECCCCCeEEEeeC-----CceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCC
Q psy12697 147 AFSPDGKFLASGSF-----DKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGH 221 (602)
Q Consensus 147 ~~s~d~~~l~s~~~-----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h 221 (602)
...|+++.+..... ++.|.+.|..+++.+..++. +
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v---------------------------------------G- 78 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG---------------------------------------G- 78 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE---------------------------------------C-
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC---------------------------------------C-
Confidence 34688888777754 68999999999998876542 1
Q ss_pred CcceEEEEEcCCCCEEEEee----------CCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCC
Q psy12697 222 ESEVFICAWNPVKDFLASGS----------GDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNN 291 (602)
Q Consensus 222 ~~~v~~~~~~~~~~~l~s~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 291 (602)
..+ .++++||++++++++ .++.|.+||..+.+....... ..+...........++++||
T Consensus 79 ~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v---------~~g~r~~~g~~P~~~a~spD 147 (386)
T 3sjl_D 79 FLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIEL---------PDAPRFLVGTYPWMTSLTPD 147 (386)
T ss_dssp SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEE---------TTCCCCCBSCCGGGEEECTT
T ss_pred CCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEEC---------CCccccccCCCCceEEEcCC
Confidence 223 389999999887765 367899999988654221110 00000001234567999999
Q ss_pred CCeEEEEeC--CCeEEEEcCCC-cceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCC-CceeEEeee----cc
Q psy12697 292 GSFLATGSY--DGYARIWTSDG-SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS-GQCEQQFSF----HS 363 (602)
Q Consensus 292 ~~~l~~~~~--dg~i~i~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~-~~~~~~~~~----~~ 363 (602)
|++++++.. ++.|.++|... +...++.. .+ . ...+....+.+++.+.||.+.+.++.+ ++....... ..
T Consensus 148 Gk~lyVan~~~~~~VsVID~~t~~vv~tI~v-~g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~ 224 (386)
T 3sjl_D 148 GKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV-PD-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPED 224 (386)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEEEEEEEC-CS-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTT
T ss_pred CCEEEEEEcCCCCeEEEEECCCCcEEEEEEC-CC-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccc
Confidence 999998864 68999999874 44444432 11 1 223333456777888899999999876 554322111 11
Q ss_pred CCee-eeec-cCCCeEEEeeCCCeEEEEEcCCCc--eeeEec---------c-CCCCeEEEEECCCCCEEEEEEC-----
Q psy12697 364 APAL-DVDW-QSNTSFASCSTDQHIHVCKLHSDK--PVKSFE---------G-HTNEVNAIKWDPQGLLLASCSD----- 424 (602)
Q Consensus 364 ~~~~-~~~~-~~~~~~~~~~~~~~i~i~d~~~~~--~~~~~~---------~-~~~~i~~~~~~~~~~~l~~~~~----- 424 (602)
.++. ...| .+++.++..+.+|.+++.|..+.. .+..+. + .......++++|+++.++....
T Consensus 225 ~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~ 304 (386)
T 3sjl_D 225 EFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEW 304 (386)
T ss_dssp SCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTT
T ss_pred ccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEecccccc
Confidence 1221 1344 357777777789999999997664 222221 0 1123445788999998888653
Q ss_pred -----CCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCC-EEEEE
Q psy12697 425 -----DMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGN-YILSA 498 (602)
Q Consensus 425 -----dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~ 498 (602)
.+.|.+.|+.+++.+.++... ..+..+++++|++ +|++.
T Consensus 305 ~hk~~~~~V~viD~~t~kv~~~i~vg-----------------------------------~~~~~lavs~D~~~~ly~t 349 (386)
T 3sjl_D 305 RHKTASRFVVVLDAKTGERLAKFEMG-----------------------------------HEIDSINVSQDEKPLLYAL 349 (386)
T ss_dssp CTTSCEEEEEEEETTTCCEEEEEEEE-----------------------------------EEECEEEECSSSSCEEEEE
T ss_pred ccCCCCCEEEEEECCCCeEEEEEECC-----------------------------------CCcceEEECCCCCeEEEEE
Confidence 257999999999988877532 2345677777886 66654
Q ss_pred -eCCCeEEEEeCCCCceeeeecccCCCeeEeeecCC
Q psy12697 499 -GVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSN 533 (602)
Q Consensus 499 -~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~ 533 (602)
..++.|.++|..+++.+.++..- +.-..+.+++|
T Consensus 350 n~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 350 STGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp ETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred cCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 45899999999999999888743 33345566655
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=5.7e-14 Score=129.63 Aligned_cols=233 Identities=9% Similarity=-0.035 Sum_probs=161.3
Q ss_pred CeEEEEEccCCCEEE-EEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEec
Q psy12697 323 PIFALKWNKRGNYIL-SAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE 401 (602)
Q Consensus 323 ~i~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~ 401 (602)
...+++++++++.++ +.+.++.|..||..+.............+..+++.+++.++++..++.|.+||...........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~ 104 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPF 104 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeec
Confidence 678999999998666 4467889999997665433222223346778888888777776668899999987654432222
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccC
Q psy12697 402 GHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKG 481 (602)
Q Consensus 402 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (602)
.....+..++++|+|+++++...++.|.+|+..+........ ....
T Consensus 105 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~----------------------------------~~~~ 150 (270)
T 1rwi_B 105 DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF----------------------------------TGLN 150 (270)
T ss_dssp CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC----------------------------------CSCC
T ss_pred CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc----------------------------------ccCC
Confidence 333578999999999988877778899999765432221100 0123
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeee
Q psy12697 482 PIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFE 560 (602)
Q Consensus 482 ~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~ 560 (602)
.+..++++++|+++++...++.|.+||...+........+...+..++++++| .+++...++.|.+|+...........
T Consensus 151 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~ 230 (270)
T 1rwi_B 151 DPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPF 230 (270)
T ss_dssp SCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCC
T ss_pred CceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeecc
Confidence 45678889999977777778899999988766544333344668899999999 66666678899999986543222110
Q ss_pred cccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEe
Q psy12697 561 GHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFK 600 (602)
Q Consensus 561 ~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i 600 (602)
.+...+.+++++|+|+++++...++.|++
T Consensus 231 -----------~~~~~p~~i~~~~~g~l~v~~~~~~~v~~ 259 (270)
T 1rwi_B 231 -----------TGLNTPLAVAVDSDRTVYVADRGNDRVVK 259 (270)
T ss_dssp -----------CSCSCEEEEEECTTCCEEEEEGGGTEEEE
T ss_pred -----------CCCCCceeEEECCCCCEEEEECCCCEEEE
Confidence 01245889999999998888888988876
No 197
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.67 E-value=5.5e-13 Score=127.99 Aligned_cols=278 Identities=10% Similarity=-0.037 Sum_probs=176.9
Q ss_pred ceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEee----------CCceEEEEecCCceeEEEeeccCceEEEEeC
Q psy12697 121 TLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGS----------FDKCVHIWSARTGQLVHSYKGTGGIFEVCWN 190 (602)
Q Consensus 121 ~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 190 (602)
+|.++|..+++.+.++.....+ .++|||||++|+.+. .++.|.+||..+++.+..+...+..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~------ 119 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAP------ 119 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcc------
Confidence 8999999999999888765555 999999999998886 3688999999998887665432100
Q ss_pred CCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeC--CCcEEEEeCCCCCCCCC-ccceEEEE
Q psy12697 191 SRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSG--DSTARIWDMTDSTKKDP-KELQIVLR 267 (602)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~--dg~i~iw~~~~~~~~~~-~~~~~~~~ 267 (602)
... +......+.|+|||++|+++.. ++.|.++| .+++.... ...
T Consensus 120 -------------------------~~~--~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~----- 166 (373)
T 2mad_H 120 -------------------------RFD--VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS----- 166 (373)
T ss_pred -------------------------ccc--cCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-----
Confidence 000 1122447899999999998874 57899999 87654211 110
Q ss_pred EEecCCCcccCCCCceeEEeeCCCC-CeEEEEeCCCeEEEEcCCCcceeecc-----cccCC-eEEEEEccCCCEEEEEe
Q psy12697 268 HCISKGGTEVPSNKDVTSLDWNNNG-SFLATGSYDGYARIWTSDGSLKSTLG-----QHKGP-IFALKWNKRGNYILSAG 340 (602)
Q Consensus 268 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~-----~~~~~-i~~~~~~~~~~~l~~~~ 340 (602)
. .++.+.|++ +.+++.+.||.+.+++..++...... ....+ .....+.+++..++..+
T Consensus 167 ------------~---~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 231 (373)
T 2mad_H 167 ------------P---TCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV 231 (373)
T ss_pred ------------C---ceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEc
Confidence 1 123344544 34566677888888887333331111 11112 12345666666555555
Q ss_pred cCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEE
Q psy12697 341 VDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLA 420 (602)
Q Consensus 341 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 420 (602)
..+.+.+.|+........ .-|++.+..... ..-.......++++|+++.++
T Consensus 232 ~~~~v~vid~~~~~~~v~----------------------------~~~~~~~~~~~~-~~~~p~g~~~~~~s~d~~~ly 282 (373)
T 2mad_H 232 YSGKILQADISAAGATNK----------------------------APIDALSGGRKA-DTWRPGGWQQVAYLKSSDGIY 282 (373)
T ss_pred CCceEEEEeccCCcceEe----------------------------eeeeecCCcccc-cceecCceEeEEECCCCCEEE
Confidence 677888888765422110 011111110000 000112244577899998888
Q ss_pred EEEC----------CCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEcc
Q psy12697 421 SCSD----------DMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNK 490 (602)
Q Consensus 421 ~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~ 490 (602)
+... ++.|.++|+.+++.+.++... .....++|+|
T Consensus 283 V~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-----------------------------------~~p~~i~~s~ 327 (373)
T 2mad_H 283 LLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-----------------------------------HDVDAISVAQ 327 (373)
T ss_pred EEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-----------------------------------CCcCeEEECC
Confidence 7653 357999999998888777432 1345678888
Q ss_pred CCC-EEEEEe-CCCeEEEEeCCCCceeeee
Q psy12697 491 RGN-YILSAG-VDKTTIIWDAASGQCEQQF 518 (602)
Q Consensus 491 ~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~ 518 (602)
||+ +++++. .++.|.+||+.+++.+..+
T Consensus 328 Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 328 DGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 988 677776 4899999999999988774
No 198
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.66 E-value=1e-13 Score=127.25 Aligned_cols=223 Identities=10% Similarity=0.099 Sum_probs=171.0
Q ss_pred CCCEEEEEecCCcEEEEeCCCCceeEEeeecc-CCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCC-CCeEE
Q psy12697 332 RGNYILSAGVDKTTIIWDAASGQCEQQFSFHS-APALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHT-NEVNA 409 (602)
Q Consensus 332 ~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~-~~i~~ 409 (602)
.++.|++++.++.|.+||.++++.+..+..+. ..+.++.+.|++.+++ +.++.|+.||. +++.+..+..+. ..+.+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 45789999999999999999999999988766 4678888999988777 56888999999 888888888653 47889
Q ss_pred EEECCCCCEEEEEEC-CCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEE
Q psy12697 410 IKWDPQGLLLASCSD-DMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKW 488 (602)
Q Consensus 410 ~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 488 (602)
+.+.|+|+++++.+. ++.|..+|. +++.+..+..... ...+......+++
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~----------------------------~~~~~~~~~~v~~ 132 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETG----------------------------IERPHAQFRQINK 132 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCS----------------------------CSSGGGSCSCCEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCC----------------------------CCcccccccCceE
Confidence 999999999999887 788888885 6666655532110 0011223445567
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccce
Q psy12697 489 NKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQL 567 (602)
Q Consensus 489 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 567 (602)
.++|+++++...++.|..||.+ |+.+.++... ....++...++| .++++..++.|..+|..+++.+..+........
T Consensus 133 ~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~ 210 (276)
T 3no2_A 133 NKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGV 210 (276)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSC
T ss_pred CCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCc
Confidence 8899999999999999999998 9999888764 455677888998 777788888999999988988888764321100
Q ss_pred EEEEecCCcEEEEEECCCCCeEEEe
Q psy12697 568 VHSYKGTGGIFEVCWNSRGDKVGAS 592 (602)
Q Consensus 568 ~~~~~~~~~i~~l~~spdg~~l~~~ 592 (602)
.-..+..++..++|..+++.
T Consensus 211 -----~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 211 -----QLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp -----CCSEEEEEEECTTSCEEEEE
T ss_pred -----cccccccceEcCCCCEEEEe
Confidence 01226677788888877776
No 199
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.66 E-value=5.6e-14 Score=129.70 Aligned_cols=237 Identities=8% Similarity=-0.015 Sum_probs=165.4
Q ss_pred ceeEEeeCCCCCeEE-EEeCCCeEEEEcCCCcceeec-ccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEe
Q psy12697 282 DVTSLDWNNNGSFLA-TGSYDGYARIWTSDGSLKSTL-GQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF 359 (602)
Q Consensus 282 ~i~~~~~~~~~~~l~-~~~~dg~i~i~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 359 (602)
...+++++++|++++ +...++.|..|+..+...... ..+...+.+++++++++.+++.. ++.|.+||..........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 678999999998777 547788999999765443333 22335678899999998666555 889999998765443221
Q ss_pred eeccCCeeeeeccCCCeEEEe-eCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCee
Q psy12697 360 SFHSAPALDVDWQSNTSFASC-STDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNC 438 (602)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~-~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 438 (602)
......+..+++.+++.+.++ ..++.|.+|+..+.............+..++++|+|+++++...++.|.+||......
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce
Confidence 122356788888887766555 4578899997665544333333334678999999999777777788999999876543
Q ss_pred eEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeee
Q psy12697 439 VHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF 518 (602)
Q Consensus 439 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 518 (602)
...... +...+..++++++|.++++...++.|.+||..........
T Consensus 184 ~~~~~~----------------------------------~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~ 229 (270)
T 1rwi_B 184 VVLPFT----------------------------------DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP 229 (270)
T ss_dssp EECCCS----------------------------------SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECC
T ss_pred Eeeccc----------------------------------CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeec
Confidence 221110 1245677888889987777777889999998765443332
Q ss_pred cccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCC
Q psy12697 519 SFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSD 553 (602)
Q Consensus 519 ~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~ 553 (602)
..+...+.+++++|+| .+++...++.|+++++...
T Consensus 230 ~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 230 FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 2333568999999999 7788888999999997654
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.66 E-value=4.7e-13 Score=128.49 Aligned_cols=283 Identities=9% Similarity=-0.027 Sum_probs=183.8
Q ss_pred EcCCCCEEEEeeC--CC---cEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEe-----
Q psy12697 230 WNPVKDFLASGSG--DS---TARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGS----- 299 (602)
Q Consensus 230 ~~~~~~~l~s~~~--dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----- 299 (602)
..|+++++++... .. .|.++|..+++.... + +....- .++++|||++++++.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~----------i-------~~g~~p-~i~~spDg~~lyv~n~~~~~ 89 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGH----------V-------NGGFLP-NPVAAHSGSEFALASTSFSR 89 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEE----------e-------cCCCCC-CeEECCCCCEEEEEeccccc
Confidence 3467776666653 22 789999987653210 0 011223 899999999999886
Q ss_pred -----CCCeEEEEcCC-Ccceeecccc-------cCCeEEEEEccCCCEEEEEec--CCcEEEEeCCCCceeEE-eeecc
Q psy12697 300 -----YDGYARIWTSD-GSLKSTLGQH-------KGPIFALKWNKRGNYILSAGV--DKTTIIWDAASGQCEQQ-FSFHS 363 (602)
Q Consensus 300 -----~dg~i~i~~~~-~~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~-~~~~~ 363 (602)
.++.|.+||.. .+....+... ......+.|+|||++|+++.. ++.|.++| .+++.+.. +....
T Consensus 90 ~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~ 168 (373)
T 2mad_H 90 IAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT 168 (373)
T ss_pred cccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc
Confidence 36789999986 3333333211 123458999999999998874 47899999 99988777 54332
Q ss_pred CCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEec-----cCCCC-eEEEEECCCCCEEEEEECCCeEEEEeCCCCe
Q psy12697 364 APALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE-----GHTNE-VNAIKWDPQGLLLASCSDDMTLKIWSLDKDN 437 (602)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~-----~~~~~-i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 437 (602)
. + .+.......+++.+.||.+.++|. +++...... ....+ .....+.+++..++..+.++.+.+.|+....
T Consensus 169 ~-~-~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~ 245 (373)
T 2mad_H 169 C-Y-HIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAG 245 (373)
T ss_pred e-E-EEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCc
Confidence 2 1 111122345777788999999999 777653321 11111 1234566666555555578899999987542
Q ss_pred e--eEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeC----------CCeEE
Q psy12697 438 C--VHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGV----------DKTTI 505 (602)
Q Consensus 438 ~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~----------dg~i~ 505 (602)
. +..+...........|.|. ....+.++|+++.+..+.. ++.|.
T Consensus 246 ~~v~~~~~~~~~~~~~~~~~p~------------------------g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~ 301 (373)
T 2mad_H 246 ATNKAPIDALSGGRKADTWRPG------------------------GWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVT 301 (373)
T ss_pred ceEeeeeeecCCcccccceecC------------------------ceEeEEECCCCCEEEEEeccCCcccccCCCCeEE
Confidence 2 2222111111112223332 2345778999888777643 35799
Q ss_pred EEeCCCCceeeeecccCCCeeEeeecCCc--eEEEee-CCCcEEEeecCCCCceeee
Q psy12697 506 IWDAASGQCEQQFSFHSAPALDVDWQSNT--SFASCS-TDQHIHVCKLHSDKPVKSF 559 (602)
Q Consensus 506 iwd~~~~~~~~~~~~~~~~v~~~~~s~~~--~l~~~~-~d~~i~iw~~~~~~~~~~~ 559 (602)
++|+.+++.+..+.. ......++|+||| .++++. .++.|.+||+.+++.+..+
T Consensus 302 VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 302 SVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 999999999988863 3468899999999 466665 4899999999998887763
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.63 E-value=6.8e-14 Score=148.47 Aligned_cols=242 Identities=12% Similarity=0.064 Sum_probs=158.0
Q ss_pred CCcceEEEEEcCCCCEEEEeeCC-----CcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeE
Q psy12697 221 HESEVFICAWNPVKDFLASGSGD-----STARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFL 295 (602)
Q Consensus 221 h~~~v~~~~~~~~~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 295 (602)
|...+..++|||||++|+.++.+ ..|++||+.+++... .... ...+..++|+|| +.|
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~-----~~~~------------~~~~~~~~wspD-~~l 222 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLA-----DELK------------WVKFSGLAWLGN-DAL 222 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEE-----EEEE------------EEESCCCEESTT-SEE
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCC-----ccCC------------CceeccEEEECC-CEE
Confidence 44568899999999999887654 469999999876421 1000 112367899999 988
Q ss_pred EEEeCCCe--------------EEEEcCCCcc---eeecc--cccCCeEEEEEccCCCEEEEEecCC-----cEEEEeCC
Q psy12697 296 ATGSYDGY--------------ARIWTSDGSL---KSTLG--QHKGPIFALKWNKRGNYILSAGVDK-----TTIIWDAA 351 (602)
Q Consensus 296 ~~~~~dg~--------------i~i~~~~~~~---~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~~wd~~ 351 (602)
+.+..++. |++|++.+.. ...+. .+...+..+.|+|||++|+..+.++ .|.+||+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~ 302 (741)
T 1yr2_A 223 LYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVT 302 (741)
T ss_dssp EEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEE
T ss_pred EEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECC
Confidence 88876653 8889876432 12222 3334588999999999998877544 89999998
Q ss_pred CC--ceeEEeeeccCCeeeeeccCCCeEEEeeC----CCeEEEEEcCCC--ceeeEeccCCCCeEEEEECCCCCEEEEEE
Q psy12697 352 SG--QCEQQFSFHSAPALDVDWQSNTSFASCST----DQHIHVCKLHSD--KPVKSFEGHTNEVNAIKWDPQGLLLASCS 423 (602)
Q Consensus 352 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 423 (602)
++ ++...+..+........+..++.++..+. ++.|.+||+.++ +....+..+...+..++++ ++.++++..
T Consensus 303 ~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~ 381 (741)
T 1yr2_A 303 NGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYI 381 (741)
T ss_dssp TTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEE
T ss_pred CCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEE
Confidence 77 31344444444444444444566766665 456999999874 3333444455557778887 667888888
Q ss_pred CCCeEEEEeCC-CCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE----
Q psy12697 424 DDMTLKIWSLD-KDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA---- 498 (602)
Q Consensus 424 ~dg~i~iwd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~---- 498 (602)
.|+..+||.++ ++.....+..+ +.+.+..+.++|+++.|+..
T Consensus 382 ~dg~~~l~~~~~~g~~~~~l~~~---------------------------------~~~~v~~~~~s~d~~~l~~~~ss~ 428 (741)
T 1yr2_A 382 HDAKSQVLAFDLDGKPAGAVSLP---------------------------------GIGSASGLSGRPGDRHAYLSFSSF 428 (741)
T ss_dssp ETTEEEEEEEETTSCEEEECBCS---------------------------------SSCEEEEEECCBTCSCEEEEEEET
T ss_pred ECCEEEEEEEeCCCCceeeccCC---------------------------------CCeEEEEeecCCCCCEEEEEEcCC
Confidence 89987777654 34434333321 13345566677777655522
Q ss_pred eCCCeEEEEeCCCCce
Q psy12697 499 GVDKTTIIWDAASGQC 514 (602)
Q Consensus 499 ~~dg~i~iwd~~~~~~ 514 (602)
...++|++||+.+++.
T Consensus 429 ~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 429 TQPATVLALDPATAKT 444 (741)
T ss_dssp TEEEEEEEEETTTTEE
T ss_pred CCCCEEEEEECCCCcE
Confidence 3358899999988763
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.62 E-value=5.5e-12 Score=118.25 Aligned_cols=271 Identities=7% Similarity=0.006 Sum_probs=185.4
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCCCccee-ecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEe
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKS-TLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF 359 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 359 (602)
..+.++++.++|++.++...++.|..|+..+.... .+......+..+++.++++.+++...++.|..+|.. ++.. .+
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~ 97 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EY 97 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EE
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-Ee
Confidence 56889999999998887777899999998844332 122334678999999999877777667889999987 5543 22
Q ss_pred ee--ccCCeeeeeccCCCeEEEeeC-CCeEEEEEcCCCceee-EeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCC
Q psy12697 360 SF--HSAPALDVDWQSNTSFASCST-DQHIHVCKLHSDKPVK-SFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDK 435 (602)
Q Consensus 360 ~~--~~~~~~~~~~~~~~~~~~~~~-~~~i~i~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 435 (602)
.. ....+..+++.+++.+.++.. ++.|..+|.. ++... .+......+..+++++++++.++...++.|..||. +
T Consensus 98 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~ 175 (300)
T 2qc5_A 98 PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-T 175 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-C
Confidence 22 335677888888777666554 7889999987 54432 23334567899999999997776666788999987 4
Q ss_pred CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee
Q psy12697 436 DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE 515 (602)
Q Consensus 436 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 515 (602)
++... +.. ..+...+..++++++|++.++....+.|.+||. +++..
T Consensus 176 g~~~~-~~~--------------------------------~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 221 (300)
T 2qc5_A 176 GKLEE-YPL--------------------------------PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEIS 221 (300)
T ss_dssp CCEEE-EEC--------------------------------SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CcEEE-eeC--------------------------------CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEE
Confidence 43321 110 012245677888888887777767788999998 55544
Q ss_pred ee-ecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEec
Q psy12697 516 QQ-FSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASA 593 (602)
Q Consensus 516 ~~-~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~ 593 (602)
.. +..+...+.++++.++| .+++...++.|..|+. +++. ..+... .....+.+++++++|++.++..
T Consensus 222 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~-~~~~~~---------~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 222 EYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTI-QEYQLQ---------TENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCE-EEEECC---------STTCCCCCEEECTTSCEEEECS
T ss_pred EEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcE-EEEECC---------ccCCccceeEeCCCCCEEEEcc
Confidence 32 33345668899999999 5555556789999997 3322 122111 0124578899999998766655
Q ss_pred cCCeEEee
Q psy12697 594 SDGSVFKN 601 (602)
Q Consensus 594 ~dg~v~i~ 601 (602)
++..+++
T Consensus 291 -~~i~~~~ 297 (300)
T 2qc5_A 291 -CKIGKLN 297 (300)
T ss_dssp -SEEEEEE
T ss_pred -CceEEeC
Confidence 3555543
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.60 E-value=1.1e-13 Score=146.85 Aligned_cols=245 Identities=15% Similarity=0.099 Sum_probs=164.0
Q ss_pred ccCCceEEEEECCCCCeEEEeeCC-----ceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccC
Q psy12697 138 RHTEPVYSVAFSPDGKFLASGSFD-----KCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQ 212 (602)
Q Consensus 138 ~h~~~V~~~~~s~d~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (602)
+|...+..++|||||++||.++.+ ..|++||+.+|+.+....
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~--------------------------------- 206 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL--------------------------------- 206 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE---------------------------------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC---------------------------------
Confidence 344578899999999999987654 469999999998753210
Q ss_pred CcceEeeCCCcceEEEEEcCCCCEEEEeeCCCc--------------EEEEeCCCCCCCCCccceEEEEEEecCCCcccC
Q psy12697 213 SKATKLIGHESEVFICAWNPVKDFLASGSGDST--------------ARIWDMTDSTKKDPKELQIVLRHCISKGGTEVP 278 (602)
Q Consensus 213 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~--------------i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (602)
+...+..++|+|| +.|+.++.++. |.+|++.++.... .... . ...
T Consensus 207 --------~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~----~lv~----~----~~~ 265 (741)
T 1yr2_A 207 --------KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD----QPVF----A----TPE 265 (741)
T ss_dssp --------EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC----EEEE----C----CTT
T ss_pred --------CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC----EEEe----c----cCC
Confidence 1111346789999 98888877654 8888886553211 0000 0 011
Q ss_pred CCCceeEEeeCCCCCeEEEEeCCC-----eEEEEcCCCc--c-eeecccccCCeEEEEEccCCCEEEEEecC----CcEE
Q psy12697 279 SNKDVTSLDWNNNGSFLATGSYDG-----YARIWTSDGS--L-KSTLGQHKGPIFALKWNKRGNYILSAGVD----KTTI 346 (602)
Q Consensus 279 ~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~~~~~~--~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~ 346 (602)
+...+..+.|+|||++|+..+.++ .|.+||+.+. . ...+..+...+.... +|+|+.|+..+.+ +.|.
T Consensus 266 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~ 344 (741)
T 1yr2_A 266 LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIV 344 (741)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEE
T ss_pred CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEE
Confidence 123478999999999998877544 8999998654 3 445555555555553 4889988877753 4599
Q ss_pred EEeCCCC--ceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcC-CCceeeEecc-CCCCeEEEEECCCCCEEEEE
Q psy12697 347 IWDAASG--QCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLH-SDKPVKSFEG-HTNEVNAIKWDPQGLLLASC 422 (602)
Q Consensus 347 ~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~-~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~ 422 (602)
+||+.++ .....+..+...+..+.+..+..+++...++..++|.+. +++....+.. +...+..++++|+++.|+..
T Consensus 345 ~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~ 424 (741)
T 1yr2_A 345 RVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLS 424 (741)
T ss_dssp EEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEE
T ss_pred EEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEE
Confidence 9999875 333334444445666777766667788888877776554 4555555654 35678899999998866633
Q ss_pred E----CCCeEEEEeCCCCe
Q psy12697 423 S----DDMTLKIWSLDKDN 437 (602)
Q Consensus 423 ~----~dg~i~iwd~~~~~ 437 (602)
. ..++|++||+.+++
T Consensus 425 ~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 425 FSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEETTEEEEEEEEETTTTE
T ss_pred EcCCCCCCEEEEEECCCCc
Confidence 2 34789999998876
No 204
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.60 E-value=6e-13 Score=125.53 Aligned_cols=298 Identities=11% Similarity=0.070 Sum_probs=193.2
Q ss_pred EEEcCCCCEEEEeeC-----CCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEe---
Q psy12697 228 CAWNPVKDFLASGSG-----DSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGS--- 299 (602)
Q Consensus 228 ~~~~~~~~~l~s~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--- 299 (602)
....|+++.++.... ++.|.+.|..+.+....... ..... ++++|||++++++.
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v-----------------G~~P~-va~spDG~~lyVan~~~ 99 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG-----------------GFLPN-PVVADDGSFIAHASTVF 99 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE-----------------CSSCE-EEECTTSSCEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC-----------------CCCCc-EEECCCCCEEEEEcccc
Confidence 345688888877765 67899999887654311110 12224 99999999988876
Q ss_pred -------CCCeEEEEcCCC-cceeecccc-------cCCeEEEEEccCCCEEEEEec--CCcEEEEeCCCCceeEEeeec
Q psy12697 300 -------YDGYARIWTSDG-SLKSTLGQH-------KGPIFALKWNKRGNYILSAGV--DKTTIIWDAASGQCEQQFSFH 362 (602)
Q Consensus 300 -------~dg~i~i~~~~~-~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~ 362 (602)
.++.|.+||... +....+... ......+.|+|||++++++.. ++.|.++|+.+++.+..+...
T Consensus 100 ~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~ 179 (386)
T 3sjl_D 100 SRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP 179 (386)
T ss_dssp EETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred cccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC
Confidence 367899999874 334443211 123557899999999998864 689999999999999888653
Q ss_pred cCCeeeeecc-CCCeEEEeeCCCeEEEEEcCC-CceeeEeccCC----CCeE-EEEEC-CCCCEEEEEECCCeEEEEeCC
Q psy12697 363 SAPALDVDWQ-SNTSFASCSTDQHIHVCKLHS-DKPVKSFEGHT----NEVN-AIKWD-PQGLLLASCSDDMTLKIWSLD 434 (602)
Q Consensus 363 ~~~~~~~~~~-~~~~~~~~~~~~~i~i~d~~~-~~~~~~~~~~~----~~i~-~~~~~-~~~~~l~~~~~dg~i~iwd~~ 434 (602)
.. ...+. ....+++.+.||.+.+.++.+ ++.......+. ..+. ...|. ++|++++ .+.+|.|.+.|+.
T Consensus 180 g~---~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~ 255 (386)
T 3sjl_D 180 DC---YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLS 255 (386)
T ss_dssp SE---EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECT
T ss_pred Cc---ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECC
Confidence 31 11222 235677888899999999876 55432221111 1221 23554 6776555 5668999999987
Q ss_pred CCee--eEeeccccc-cEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeC----------C
Q psy12697 435 KDNC--VHDLQAHNK-EIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGV----------D 501 (602)
Q Consensus 435 ~~~~--~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~----------d 501 (602)
+... ...+..... .+ ...| .......++++++++.+..... .
T Consensus 256 ~~~~~v~~~~~~~~~~~~-~~g~------------------------~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 256 SGDAKFLPAVEALTEAER-ADGW------------------------RPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp TSSCEECCCEESSCHHHH-HTTE------------------------EECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred CCcceeecceeccccccc-cccc------------------------cCCCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 6532 221110000 00 0001 1223335677888888877643 2
Q ss_pred CeEEEEeCCCCceeeeecccCCCeeEeeecCCc--eEEEe-eCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEE
Q psy12697 502 KTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT--SFASC-STDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIF 578 (602)
Q Consensus 502 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~--~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 578 (602)
..|.+.|+.+++.+..+... ..+.++++++|+ +|+++ ..++.|.++|..+++.+.+++.. +...
T Consensus 311 ~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~------------~~p~ 377 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL------------GHGP 377 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC------------CSSC
T ss_pred CEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC------------CCCc
Confidence 57999999999999888743 468899999998 45554 45899999998888777766533 3445
Q ss_pred EEEECCC
Q psy12697 579 EVCWNSR 585 (602)
Q Consensus 579 ~l~~spd 585 (602)
.|.+++|
T Consensus 378 ~l~~s~d 384 (386)
T 3sjl_D 378 QVITTAD 384 (386)
T ss_dssp CEEEECC
T ss_pred eeEECCc
Confidence 6666666
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.60 E-value=1.6e-11 Score=115.04 Aligned_cols=277 Identities=9% Similarity=-0.024 Sum_probs=188.9
Q ss_pred CCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEe
Q psy12697 220 GHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGS 299 (602)
Q Consensus 220 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 299 (602)
.....+.++++.++++..++...++.|.+|+.. +... . ... . .....+.++++.+++.+.++..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~------~---~~~-~-----~~~~~~~~i~~~~~g~l~v~~~ 80 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK------E---FEV-P-----TPDAKVMCLIVSSLGDIWFTEN 80 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE------E---EEC-S-----STTCCEEEEEECTTSCEEEEET
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE------E---EEC-C-----CCCCcceeEEECCCCCEEEEec
Confidence 345678899999999988877778999999976 3211 0 000 0 1135688999999998877777
Q ss_pred CCCeEEEEcCCCcceee-cccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEE-eeeccCCeeeeeccCCCeE
Q psy12697 300 YDGYARIWTSDGSLKST-LGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ-FSFHSAPALDVDWQSNTSF 377 (602)
Q Consensus 300 ~dg~i~i~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 377 (602)
.++.|..||..+..... .......+..+++.++++.+++...++.|..+|.. ++.... +......+..+.+.+++.+
T Consensus 81 ~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l 159 (300)
T 2qc5_A 81 GANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNAL 159 (300)
T ss_dssp TTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSE
T ss_pred CCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCE
Confidence 78899999988554322 22234678999999999887777668899999987 554422 2223456778888887766
Q ss_pred EEeeC-CCeEEEEEcCCCceee-EeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEEC
Q psy12697 378 ASCST-DQHIHVCKLHSDKPVK-SFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWS 455 (602)
Q Consensus 378 ~~~~~-~~~i~i~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~ 455 (602)
.++.. ++.|..++. +++... ....+...+..++++++|++.++....+.|.+||. +++......
T Consensus 160 ~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~------------ 225 (300)
T 2qc5_A 160 WFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDI------------ 225 (300)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC------------
T ss_pred EEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEEC------------
Confidence 66554 678999998 554433 22234457899999999987777767788999997 333222100
Q ss_pred CCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceee-eecccCCCeeEeeecCCc
Q psy12697 456 PTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQ-QFSFHSAPALDVDWQSNT 534 (602)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~s~~~ 534 (602)
..+...+.+++++++|++.++...++.|..||. +++... .+......+.++++.++|
T Consensus 226 ---------------------~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g 283 (300)
T 2qc5_A 226 ---------------------PTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDG 283 (300)
T ss_dssp ---------------------SSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTS
T ss_pred ---------------------CCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCC
Confidence 012345678888889887777666789999998 454332 223334568899999999
Q ss_pred eEEEeeCCCcEEEeec
Q psy12697 535 SFASCSTDQHIHVCKL 550 (602)
Q Consensus 535 ~l~~~~~d~~i~iw~~ 550 (602)
.|..++.. .|..++.
T Consensus 284 ~l~v~~~~-~i~~~~p 298 (300)
T 2qc5_A 284 SVWFALKC-KIGKLNL 298 (300)
T ss_dssp CEEEECSS-EEEEEEE
T ss_pred CEEEEccC-ceEEeCC
Confidence 44444444 6766663
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.60 E-value=1.4e-12 Score=123.25 Aligned_cols=230 Identities=9% Similarity=0.049 Sum_probs=156.3
Q ss_pred cCCeEEEEEccCCCEEEE-------EecCCcEEEEeCCCCceeEEee----eccCCeeeeeccCC-CeEEEeeCCCeEEE
Q psy12697 321 KGPIFALKWNKRGNYILS-------AGVDKTTIIWDAASGQCEQQFS----FHSAPALDVDWQSN-TSFASCSTDQHIHV 388 (602)
Q Consensus 321 ~~~i~~~~~~~~~~~l~~-------~~~dg~i~~wd~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~i~i 388 (602)
-....+++|+++++.+++ ...++.|..||..+++...... .+...+..+.+.++ +.+.++...+.|.+
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~ 96 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLV 96 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEE
Confidence 345679999999987777 5678899999988877643221 13356788999998 88887777778999
Q ss_pred EEcCCCceeeE-ecc----CCCCeEEEEECCCCCEEEEEECC---------------CeEEEEeCCCCeeeEeecccccc
Q psy12697 389 CKLHSDKPVKS-FEG----HTNEVNAIKWDPQGLLLASCSDD---------------MTLKIWSLDKDNCVHDLQAHNKE 448 (602)
Q Consensus 389 ~d~~~~~~~~~-~~~----~~~~i~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~~~~~~~~~~~ 448 (602)
||.. ++.... ... ....+.+++++|+|+++++...+ +.|..||.. ++..... .
T Consensus 97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~---- 169 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-T---- 169 (314)
T ss_dssp EETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-E----
T ss_pred EeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-c----
Confidence 9988 654332 221 12358899999999888777654 456666654 3322111 0
Q ss_pred EEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEc----cCCCEEEEE-eCCCeEEEEeCC-CCc-----eeee
Q psy12697 449 IYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWN----KRGNYILSA-GVDKTTIIWDAA-SGQ-----CEQQ 517 (602)
Q Consensus 449 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s----~~~~~l~s~-~~dg~i~iwd~~-~~~-----~~~~ 517 (602)
+......++++ |+++.|..+ ..++.|.+||.. +++ ....
T Consensus 170 ------------------------------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~ 219 (314)
T 1pjx_A 170 ------------------------------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH 219 (314)
T ss_dssp ------------------------------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE
T ss_pred ------------------------------CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEE
Confidence 11234567888 888765554 567899999986 443 2233
Q ss_pred ecccC-CCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEecc-
Q psy12697 518 FSFHS-APALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASAS- 594 (602)
Q Consensus 518 ~~~~~-~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~- 594 (602)
+..+. ..+..++++++| .+++...++.|.+||..+++.+..+..+ ...+.+++|+|||+.|++++.
T Consensus 220 ~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~-----------~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 220 IPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP-----------FEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp CCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS-----------SSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCC-----------CCCceeEEECCCCCEEEEEeCC
Confidence 33343 567889999999 6666667889999998766655444322 256899999999996665554
Q ss_pred CCeE
Q psy12697 595 DGSV 598 (602)
Q Consensus 595 dg~v 598 (602)
++.|
T Consensus 289 ~~~l 292 (314)
T 1pjx_A 289 NNAV 292 (314)
T ss_dssp TTEE
T ss_pred CCeE
Confidence 3443
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.58 E-value=1.3e-12 Score=123.48 Aligned_cols=249 Identities=12% Similarity=0.131 Sum_probs=167.8
Q ss_pred eccCCceEEEEECCCCCeEEE-------eeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcccccccc
Q psy12697 137 TRHTEPVYSVAFSPDGKFLAS-------GSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIE 209 (602)
Q Consensus 137 ~~h~~~V~~~~~s~d~~~l~s-------~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (602)
...-....+++|+++|+++++ +..++.|.+||..+++.... ..
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~-~~----------------------------- 63 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVI-CK----------------------------- 63 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEE-EC-----------------------------
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEE-Ee-----------------------------
Confidence 344456789999999998888 67889999999888775321 10
Q ss_pred ccCCcceEeeCCCcceEEEEEcCC-CCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEee
Q psy12697 210 IPQSKATKLIGHESEVFICAWNPV-KDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDW 288 (602)
Q Consensus 210 ~~~~~~~~l~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 288 (602)
....++...+..++++++ ++++++. ..+.|.+||.. ++..... ... ........+.++++
T Consensus 64 ------~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~----------~~~-~~~~~~~~~~~i~~ 124 (314)
T 1pjx_A 64 ------PEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIA----------KKD-SEGRRMQGCNDCAF 124 (314)
T ss_dssp ------CEETTEECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECC----------SBC-TTSCBCBCCCEEEE
T ss_pred ------cccCCCCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEE----------ecc-CCCccccCCcCEEE
Confidence 001124456889999999 6655544 44478889887 4321000 000 00011245789999
Q ss_pred CCCCCeEEEEeCC---------------CeEEEEcCCCcceeecccccCCeEEEEEc----cCCCEEEEE-ecCCcEEEE
Q psy12697 289 NNNGSFLATGSYD---------------GYARIWTSDGSLKSTLGQHKGPIFALKWN----KRGNYILSA-GVDKTTIIW 348 (602)
Q Consensus 289 ~~~~~~l~~~~~d---------------g~i~i~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~-~~dg~i~~w 348 (602)
+++|+++++...+ +.|..|+.++... .+..+......++|+ |+++.++.+ ..++.|.+|
T Consensus 125 d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~-~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~ 203 (314)
T 1pjx_A 125 DYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSY 203 (314)
T ss_dssp CTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEE-EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEE-EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEE
Confidence 9999887776655 5788888765433 333344567889999 999766555 467899999
Q ss_pred eCC-CCcee-----EEeeecc-CCeeeeeccCCCeEEEee-CCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEE
Q psy12697 349 DAA-SGQCE-----QQFSFHS-APALDVDWQSNTSFASCS-TDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLA 420 (602)
Q Consensus 349 d~~-~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 420 (602)
|.. +++.. ..+..+. ..+..+++.+++.+.++. .++.|.+||..+++.+..+..+...+.+++++|+++.|+
T Consensus 204 ~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~ 283 (314)
T 1pjx_A 204 DIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIF 283 (314)
T ss_dssp EEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEE
T ss_pred ECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEE
Confidence 976 44321 1222222 456778888887766654 678999999987777777777777899999999999555
Q ss_pred EE-ECCCeEEEEeCCC
Q psy12697 421 SC-SDDMTLKIWSLDK 435 (602)
Q Consensus 421 ~~-~~dg~i~iwd~~~ 435 (602)
++ ..++.|..|++..
T Consensus 284 v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 284 VTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEETTTTEEEEEECSS
T ss_pred EEeCCCCeEEEEeCCC
Confidence 44 4567899999864
No 208
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.56 E-value=3.2e-13 Score=128.73 Aligned_cols=300 Identities=14% Similarity=0.026 Sum_probs=195.5
Q ss_pred EEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcc
Q psy12697 145 SVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESE 224 (602)
Q Consensus 145 ~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~ 224 (602)
+..+..++. |..++.++.|..|| .+++.+..+.. +...
T Consensus 24 ~~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~~~----------------------------------------~~~~ 61 (330)
T 3hxj_A 24 SPILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFFKS----------------------------------------GEII 61 (330)
T ss_dssp CCEECTTSC-EECSSTTTTTEEEC-TTSCEEESSCG----------------------------------------GGEE
T ss_pred CceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEEec----------------------------------------CCCc
Confidence 344545554 56677788899999 88877543221 1223
Q ss_pred eEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeE
Q psy12697 225 VFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYA 304 (602)
Q Consensus 225 v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 304 (602)
+.++...+++. +..++.+ +..+|. +++........ ........+. +..+.+++.++.+
T Consensus 62 ~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~----------------~~~~~~~~~~--~~~l~v~t~~~~l 119 (330)
T 3hxj_A 62 ECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTK----------------KAIVSDFTIF--EDILYVTSMDGHL 119 (330)
T ss_dssp EECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC---------------------CCEEEE--TTEEEEECTTSEE
T ss_pred ccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECC----------------CCcccCceEE--CCEEEEEecCCEE
Confidence 44555555554 4445444 777775 33322111111 0111122222 4567888889999
Q ss_pred EEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCC
Q psy12697 305 RIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQ 384 (602)
Q Consensus 305 ~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (602)
..+|..+............+.++...+++. +..++.++.+..+|.. ++....+......+.++...+++.+.+++ +
T Consensus 120 ~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~ 195 (330)
T 3hxj_A 120 YAINTDGTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--D 195 (330)
T ss_dssp EEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--S
T ss_pred EEEcCCCCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--C
Confidence 999988665555554555566667777776 6667778999999998 88777777666667777777777777777 8
Q ss_pred eEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCC
Q psy12697 385 HIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNP 464 (602)
Q Consensus 385 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 464 (602)
.+..+| .+++...........+.++..+++|. |..++.++.|..+|. +++.+..+......
T Consensus 196 ~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~---------------- 256 (330)
T 3hxj_A 196 KVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRI---------------- 256 (330)
T ss_dssp SEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCC----------------
T ss_pred EEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCc----------------
Confidence 899999 77777766666666788889988875 555667788888874 45544443321111
Q ss_pred CcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCCceEEEeeCCCc
Q psy12697 465 NMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQH 544 (602)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~l~~~~~d~~ 544 (602)
+..+.+.+++ .|..++.+|.|..+|. +++.+..+......+.++...+++.|..++.+|.
T Consensus 257 ------------------~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~ 316 (330)
T 3hxj_A 257 ------------------ESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNGK 316 (330)
T ss_dssp ------------------CSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTSC
T ss_pred ------------------cccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCCe
Confidence 1122333344 4666778888999996 6877777665666677888888888888999999
Q ss_pred EEEeecC
Q psy12697 545 IHVCKLH 551 (602)
Q Consensus 545 i~iw~~~ 551 (602)
+++...+
T Consensus 317 ~~~~~~~ 323 (330)
T 3hxj_A 317 FYALFNL 323 (330)
T ss_dssp EEEEEC-
T ss_pred EEEEecc
Confidence 9988754
No 209
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.55 E-value=6.3e-13 Score=126.65 Aligned_cols=290 Identities=12% Similarity=0.051 Sum_probs=190.9
Q ss_pred CEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcce
Q psy12697 235 DFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLK 314 (602)
Q Consensus 235 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~ 314 (602)
..+..++.++.|..|| .+++....... ....+.++...+++. +.+++.+ +..+|.+++..
T Consensus 31 g~l~v~t~~~~l~~~d-~~g~~~~~~~~----------------~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~~g~~~ 90 (330)
T 3hxj_A 31 GTIYLGSSNKNLYAIN-TDGSVKWFFKS----------------GEIIECRPSIGKDGT-IYFGSDK--VYAINPDGTEK 90 (330)
T ss_dssp SCEECSSTTTTTEEEC-TTSCEEESSCG----------------GGEEEECCEETTTTE-ECCSSCE--EEEECCCGGGG
T ss_pred CeEEEEcCCCEEEEEC-CCCcEEEEEec----------------CCCcccceEEecCCc-EEEecCc--EEEECCCCcEE
Confidence 3566777788888998 66553221111 123346666766665 5555554 88888766554
Q ss_pred eecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCC
Q psy12697 315 STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSD 394 (602)
Q Consensus 315 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~ 394 (602)
..............+. +..+..++.++.+..+|.. ++...........+..+...+++.+.+++.++.|..+|.. +
T Consensus 91 ~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g 166 (330)
T 3hxj_A 91 WRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-G 166 (330)
T ss_dssp GGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-S
T ss_pred EEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-C
Confidence 4443333222233333 4567888889999999988 7777766665555666777778889999999999999998 7
Q ss_pred ceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeee
Q psy12697 395 KPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKS 474 (602)
Q Consensus 395 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (602)
+....+......+.++.+++++.+.+.. +.|..+| .+++.........
T Consensus 167 ~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~---------------------------- 214 (330)
T 3hxj_A 167 TEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGY---------------------------- 214 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSS----------------------------
T ss_pred CEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCC----------------------------
Confidence 7776666666667788888888755544 7799999 6666555443222
Q ss_pred ccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCCceEEEeeCCCcEEEeecCCCC
Q psy12697 475 TLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDK 554 (602)
Q Consensus 475 ~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~ 554 (602)
..+.++...++|. |..++.++.|..+|. +++.+..+......+..+.+.+++.|..++.+|.|..+|. +++
T Consensus 215 ------~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~ 285 (330)
T 3hxj_A 215 ------WTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGT 285 (330)
T ss_dssp ------CCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSC
T ss_pred ------cceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCc
Confidence 2344555566665 555666788888884 5666666665544455667777778888888989999995 555
Q ss_pred ceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 555 PVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
.+..+... ...+.++..+++|+ |.+++.+|.+++.
T Consensus 286 ~~~~~~~~-----------~~~~~~~~~d~~g~-l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 286 EKWNFETG-----------SWIIATPVIDENGT-IYFGTRNGKFYAL 320 (330)
T ss_dssp EEEEEECS-----------SCCCSCCEECTTCC-EEEECTTSCEEEE
T ss_pred EEEEEEcC-----------CccccceEEcCCCE-EEEEcCCCeEEEE
Confidence 44443321 24466777778886 5668889988763
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.51 E-value=1.2e-11 Score=120.63 Aligned_cols=247 Identities=11% Similarity=0.023 Sum_probs=166.3
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCC--cEEEEeCCCCceeEE
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDK--TTIIWDAASGQCEQQ 358 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~~wd~~~~~~~~~ 358 (602)
.....++|+++++++++...++.|+.||.++..+..+........ ++|+++++.|+++..++ .|.+++...+.....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 457899999999988887778999999998655544433333334 99999999999888766 788888876654433
Q ss_pred e----eeccCCeeeeeccC-CCeEEEeeCCCeEEEEEcCCCceeeE----eccCCCCe--EEEEECCC-CCEEEEEECCC
Q psy12697 359 F----SFHSAPALDVDWQS-NTSFASCSTDQHIHVCKLHSDKPVKS----FEGHTNEV--NAIKWDPQ-GLLLASCSDDM 426 (602)
Q Consensus 359 ~----~~~~~~~~~~~~~~-~~~~~~~~~~~~i~i~d~~~~~~~~~----~~~~~~~i--~~~~~~~~-~~~l~~~~~dg 426 (602)
+ ......+..+++.+ ++.++++..++.|+.||..++..... ..++...- ..++|+|+ +.++++-..++
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC
Confidence 3 21345677888998 68888888889999999987763322 22222222 39999995 55666666778
Q ss_pred eEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe-CCCeEE
Q psy12697 427 TLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTI 505 (602)
Q Consensus 427 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~dg~i~ 505 (602)
.|+.|+.... +..+.++.. ... .... ......-.....++++|+|+++++-. .++.|+
T Consensus 290 ~I~~~~~~g~--~~~~~g~~~----------~~g----~~dg-----~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~ 348 (409)
T 3hrp_A 290 SVYKITPDGE--CEWFCGSAT----------QKT----VQDG-----LREEALFAQPNGMTVDEDGNFYIVDGFKGYCLR 348 (409)
T ss_dssp EEEEECTTCC--EEEEEECTT----------CCS----CBCE-----EGGGCBCSSEEEEEECTTCCEEEEETTTTCEEE
T ss_pred EEEEEecCCC--EEEEEeCCC----------CCC----cCCC-----cccccEeCCCeEEEEeCCCCEEEEeCCCCCEEE
Confidence 9999987643 222221110 000 0000 00011123467899999999888877 889999
Q ss_pred EEeCCCCceeeeeccc---------------CCCeeEeeecCCc-eEEEeeCCCcEEEeec
Q psy12697 506 IWDAASGQCEQQFSFH---------------SAPALDVDWQSNT-SFASCSTDQHIHVCKL 550 (602)
Q Consensus 506 iwd~~~~~~~~~~~~~---------------~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~ 550 (602)
.||+.++.. ..+.++ -.....+++++++ .+++-..+++|+.+++
T Consensus 349 ~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 349 KLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 999877764 333333 1347889999999 6666677788887764
No 211
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.51 E-value=3.6e-11 Score=116.66 Aligned_cols=307 Identities=10% Similarity=0.003 Sum_probs=192.4
Q ss_pred CCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEE
Q psy12697 151 DGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAW 230 (602)
Q Consensus 151 d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~ 230 (602)
++..++.++.++.|..+|..+|+.+..+....... + .......+.. ..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~---~----------------------------~~~~~~~~~~-~~ 99 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG---W----------------------------FSKEPALLSG-GV 99 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC------C----------------------------CSCCCCCEEE-EE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccc---c----------------------------ccccCccccc-Cc
Confidence 46778888889999999999999886654321000 0 0000111111 11
Q ss_pred cCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCce-eEEeeCCCCCeEEEEeCCCeEEEEcC
Q psy12697 231 NPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDV-TSLDWNNNGSFLATGSYDGYARIWTS 309 (602)
Q Consensus 231 ~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~dg~i~i~~~ 309 (602)
..++..++.++.++.|..+|..+++........ ..+ ..... .+..+++++.++.+..+|.
T Consensus 100 ~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~-----------------~~~~~~p~~--~~~~v~v~~~~g~l~~~d~ 160 (376)
T 3q7m_A 100 TVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVA-----------------GEALSRPVV--SDGLVLIHTSNGQLQALNE 160 (376)
T ss_dssp EEETTEEEEEETTSEEEEEETTTCCEEEEEECS-----------------SCCCSCCEE--ETTEEEEECTTSEEEEEET
T ss_pred eEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCC-----------------CceEcCCEE--ECCEEEEEcCCCeEEEEEC
Confidence 224567888889999999999887643211110 011 11111 2447888889999999997
Q ss_pred C-CcceeecccccCCe-----EEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCC----------eeeeeccC
Q psy12697 310 D-GSLKSTLGQHKGPI-----FALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP----------ALDVDWQS 373 (602)
Q Consensus 310 ~-~~~~~~~~~~~~~i-----~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~----------~~~~~~~~ 373 (602)
. ++............ ...... +..++.++.++.+..+|..+++.+......... +.......
T Consensus 161 ~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~ 238 (376)
T 3q7m_A 161 ADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV 238 (376)
T ss_dssp TTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE
T ss_pred CCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE
Confidence 5 55554443221110 111222 456788888999999999999988776543211 11111122
Q ss_pred CCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEE
Q psy12697 374 NTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIK 453 (602)
Q Consensus 374 ~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~ 453 (602)
++.+++++.++.+..+|..+++.+..... .....+.. ++..++.++.++.|..+|..+++.+.........
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~----- 309 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHR----- 309 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTS-----
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCC-----
Confidence 57788888899999999999988766542 23444444 3667888889999999999998876655421110
Q ss_pred ECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCC
Q psy12697 454 WSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSN 533 (602)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~ 533 (602)
.+..... .+..|+.++.+|.|.++|..+|+.+.........+.......+
T Consensus 310 ----------------------------~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~ 359 (376)
T 3q7m_A 310 ----------------------------LLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAAD 359 (376)
T ss_dssp ----------------------------CCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEET
T ss_pred ----------------------------cccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEEC
Confidence 0000111 2456888889999999999999988777654444433222235
Q ss_pred ceEEEeeCCCcEEEee
Q psy12697 534 TSFASCSTDQHIHVCK 549 (602)
Q Consensus 534 ~~l~~~~~d~~i~iw~ 549 (602)
+.|+.++.+|.|+.|+
T Consensus 360 ~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 360 GKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TEEEEEBTTSCEEEEE
T ss_pred CEEEEEeCCCEEEEEe
Confidence 5888899999999887
No 212
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.51 E-value=2.1e-12 Score=124.30 Aligned_cols=282 Identities=10% Similarity=0.054 Sum_probs=185.3
Q ss_pred CCCCEEEEeeC-C----CcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEe-------
Q psy12697 232 PVKDFLASGSG-D----STARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGS------- 299 (602)
Q Consensus 232 ~~~~~l~s~~~-d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~------- 299 (602)
++++.+++... + +.|.+.|..+.+....... ...- .++++|||++++++.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v-----------------G~~P-gia~SpDgk~lyVan~~~~~~~ 143 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG-----------------GFLP-HPVAAEDGSFFAQASTVFERIA 143 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE-----------------CSSC-EEEECTTSSCEEEEEEEEEETT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC-----------------CCCC-ceEECCCCCEEEEEeccccccc
Confidence 35555555544 2 6899999987754321111 1223 899999999998886
Q ss_pred ---CCCeEEEEcCCC-cceeecccc-------cCCeEEEEEccCCCEEEEEec--CCcEEEEeCCCCceeEEeeeccCCe
Q psy12697 300 ---YDGYARIWTSDG-SLKSTLGQH-------KGPIFALKWNKRGNYILSAGV--DKTTIIWDAASGQCEQQFSFHSAPA 366 (602)
Q Consensus 300 ---~dg~i~i~~~~~-~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~~ 366 (602)
.++.|.++|... +....+.-. ......+.|+|||++++++.. ++.|.+.|+.+++.+..+.....
T Consensus 144 ~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-- 221 (426)
T 3c75_H 144 RGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-- 221 (426)
T ss_dssp EEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--
T ss_pred cCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc--
Confidence 367899999863 444443211 123457899999999998874 57899999999999888765332
Q ss_pred eeeeccCCCeEEEeeCCCeEEEEEcCCCceeeE----eccCCCC-eEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeE-
Q psy12697 367 LDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKS----FEGHTNE-VNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVH- 440 (602)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~----~~~~~~~-i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~- 440 (602)
..+.......+++.+.||.+.+.+..+++.... +.....+ ...+.+.+++..++..+..+.|.+.|+.......
T Consensus 222 ~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~ 301 (426)
T 3c75_H 222 YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFR 301 (426)
T ss_dssp EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEEC
T ss_pred eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEe
Confidence 112112235677778888888888865554422 1111111 1235689999888888888999999986543211
Q ss_pred -eecccc-ccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeC----------CCeEEEEe
Q psy12697 441 -DLQAHN-KEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGV----------DKTTIIWD 508 (602)
Q Consensus 441 -~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~----------dg~i~iwd 508 (602)
.+.... ..+ ...........++++|+++.+++... ++.|.+.|
T Consensus 302 ~~~~~~~~~~i-------------------------~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 302 APIEALTEAER-------------------------ADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp CCEESSCTTTG-------------------------GGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred eeeeecccccc-------------------------ccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence 110000 000 00001112224688999887776542 35799999
Q ss_pred CCCCceeeeecccCCCeeEeeecCCc--eEEEee-CCCcEEEeecCCCCceeee
Q psy12697 509 AASGQCEQQFSFHSAPALDVDWQSNT--SFASCS-TDQHIHVCKLHSDKPVKSF 559 (602)
Q Consensus 509 ~~~~~~~~~~~~~~~~v~~~~~s~~~--~l~~~~-~d~~i~iw~~~~~~~~~~~ 559 (602)
+.+++.+.++... .....+.|+||+ ++++.. .++.|.++|+.+++.+.++
T Consensus 357 ~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 357 AETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 9999999888743 357899999998 566666 5899999999998888776
No 213
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.50 E-value=2.7e-09 Score=114.23 Aligned_cols=412 Identities=9% Similarity=0.057 Sum_probs=249.1
Q ss_pred ceeeeecccceeeeeeecc-CCc-eEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCC
Q psy12697 121 TLPLWDVERGECLNTLTRH-TEP-VYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNP 198 (602)
Q Consensus 121 ~i~vwd~~~~~~~~~l~~h-~~~-V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (602)
.|..||.++++......++ ... |.++...+++++.+ ++.++-|..||..+++......
T Consensus 151 gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~------------------- 210 (795)
T 4a2l_A 151 GLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIP------------------- 210 (795)
T ss_dssp EEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC--------------------
T ss_pred ceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecC-------------------
Confidence 3666776655433221111 123 88898888887666 5555558888887765432100
Q ss_pred CCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCC-Cccc
Q psy12697 199 PESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKG-GTEV 277 (602)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 277 (602)
..+...|.++...+++.+.+ ++.++-+..|+..++... ...... ....
T Consensus 211 --------------------~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~----------~~~~~~~~~~~ 259 (795)
T 4a2l_A 211 --------------------ILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIK----------NYLHSPSNPKS 259 (795)
T ss_dssp -----------------------CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEE----------EECCCTTCTTS
T ss_pred --------------------CCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEE----------EeecCCCCccc
Confidence 01234577887777766444 444444888887654211 000000 0001
Q ss_pred CCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeeccc--------ccCCeEEEEEccCCCEEEEEecCCcEEEEe
Q psy12697 278 PSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQ--------HKGPIFALKWNKRGNYILSAGVDKTTIIWD 349 (602)
Q Consensus 278 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd 349 (602)
.....|.++...++|.+. +|+.+| |.+|+........+.. ....|.++...++|. |..|+.++-|..|+
T Consensus 260 l~~~~i~~i~~d~~g~lW-igt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~ 336 (795)
T 4a2l_A 260 ISSNYIRSLAMDSQNRLW-IGTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYH 336 (795)
T ss_dssp CSCSBEEEEEECTTSCEE-EEESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEEC
T ss_pred cCCCeEEEEEEcCCCCEE-EEeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeC
Confidence 123679999999888754 455554 7888876544433321 235699999999887 55566777788888
Q ss_pred CCCCceeEEee------eccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEec--------cCCCCeEEEEECCC
Q psy12697 350 AASGQCEQQFS------FHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE--------GHTNEVNAIKWDPQ 415 (602)
Q Consensus 350 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~--------~~~~~i~~~~~~~~ 415 (602)
..++....... .....|.++...+++.+.+|+.++-|..|+..+++...... .....|.++..+++
T Consensus 337 ~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 416 (795)
T 4a2l_A 337 PIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK 416 (795)
T ss_dssp GGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT
T ss_pred CCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC
Confidence 76554322111 12345788888888899999999889999988765433221 12357999999999
Q ss_pred CCEEEEEECCCeEEEEeCCCCeeeEeec----cccccEEEEEECCCCCCCCCCCcceeeeeee------cc-------CC
Q psy12697 416 GLLLASCSDDMTLKIWSLDKDNCVHDLQ----AHNKEIYTIKWSPTGPETSNPNMSLIFILKS------TL-------GQ 478 (602)
Q Consensus 416 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~------~~-------~~ 478 (602)
++.|..|+.++-|.+||..+++...... .....|.++...+++....... ..+..+.. .+ .-
T Consensus 417 g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~ 495 (795)
T 4a2l_A 417 KSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPV 495 (795)
T ss_dssp TTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBC
T ss_pred CCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEcccccccccc
Confidence 8857777877779999988765433221 2345788888877665322221 12221110 00 11
Q ss_pred ccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec-------ccCCCeeEeeecCCceEEEeeCCCcEEEeecC
Q psy12697 479 HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS-------FHSAPALDVDWQSNTSFASCSTDQHIHVCKLH 551 (602)
Q Consensus 479 ~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~ 551 (602)
....|.++...++|++.+... + -|..||..+++. .+. .....|.++...++|.|..++.. .+..||..
T Consensus 496 ~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~d~~ 570 (795)
T 4a2l_A 496 VSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-GFYCFNEK 570 (795)
T ss_dssp CCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-CEEEEETT
T ss_pred CCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-CceeECCC
Confidence 236789999999998766554 4 488999877654 222 23456889999999955545554 68888876
Q ss_pred CCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 552 SDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
+++.. .+.. ..|- ....|.++..+++|++.+++ .+|..+++
T Consensus 571 ~~~~~-~~~~-~~gl------~~~~i~~i~~d~~g~lWi~t-~~Gl~~~~ 611 (795)
T 4a2l_A 571 DKQIK-RYNT-TNGL------PNNVVYGILEDSFGRLWLST-NRGISCFN 611 (795)
T ss_dssp TTEEE-EECG-GGTC------SCSCEEEEEECTTSCEEEEE-TTEEEEEE
T ss_pred CCcEE-EeCC-CCCC------chhheEEEEECCCCCEEEEc-CCceEEEc
Confidence 54322 2211 1110 12458888899888766544 67766654
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.50 E-value=3.3e-11 Score=112.51 Aligned_cols=226 Identities=13% Similarity=0.147 Sum_probs=149.8
Q ss_pred cCCeEEEEEccCCCE-EEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeE
Q psy12697 321 KGPIFALKWNKRGNY-ILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKS 399 (602)
Q Consensus 321 ~~~i~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~ 399 (602)
..-..+..|++++.. +++...++.|..||..+++.. .+. ....+..+++.+++.++++. ++.|.+||..+++....
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEE
Confidence 344568899996554 455556789999999887652 232 34678889999998877776 67899999988764332
Q ss_pred ecc----CCCCeEEEEECCCCCEEEEEECC---------CeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCc
Q psy12697 400 FEG----HTNEVNAIKWDPQGLLLASCSDD---------MTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNM 466 (602)
Q Consensus 400 ~~~----~~~~i~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 466 (602)
... ....+..++++|+|+++++...+ ..-.+|.+........+..
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~---------------------- 146 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD---------------------- 146 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE----------------------
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee----------------------
Confidence 221 12357889999999977655322 2223443332111111100
Q ss_pred ceeeeeeeccCCccCCeEEEEEccCCCEEE-EEeCCCeEEEEeC--CCCce-----eeeecccCCCeeEeeecCCc-eEE
Q psy12697 467 SLIFILKSTLGQHKGPIFALKWNKRGNYIL-SAGVDKTTIIWDA--ASGQC-----EQQFSFHSAPALDVDWQSNT-SFA 537 (602)
Q Consensus 467 ~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~-s~~~dg~i~iwd~--~~~~~-----~~~~~~~~~~v~~~~~s~~~-~l~ 537 (602)
+....+.++|+||++.|+ +.+.++.|.+||+ .++.. ...+..+......+++.++| .++
T Consensus 147 ------------~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwv 214 (297)
T 3g4e_A 147 ------------QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWV 214 (297)
T ss_dssp ------------EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEE
T ss_pred ------------ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEE
Confidence 122346788999998765 4455788999987 45543 22333344567889999999 666
Q ss_pred EeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEEC-CCCCeEEEecc
Q psy12697 538 SCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWN-SRGDKVGASAS 594 (602)
Q Consensus 538 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s-pdg~~l~~~~~ 594 (602)
+....+.|.+||..+++.+..+.... ..+++++|. ||++.|++++.
T Consensus 215 a~~~~~~v~~~d~~tG~~~~~i~~p~-----------~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 215 ACYNGGRVIRLDPVTGKRLQTVKLPV-----------DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEETTTEEEEECTTTCCEEEEEECSS-----------SBEEEEEEESGGGCEEEEEEB
T ss_pred EEcCCCEEEEEcCCCceEEEEEECCC-----------CCceEEEEeCCCCCEEEEEcC
Confidence 66677889999987777666554332 568999998 89988877665
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.49 E-value=2.3e-11 Score=116.99 Aligned_cols=279 Identities=11% Similarity=0.080 Sum_probs=178.8
Q ss_pred CCCCeEEEeeC-C----ceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcc
Q psy12697 150 PDGKFLASGSF-D----KCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESE 224 (602)
Q Consensus 150 ~d~~~l~s~~~-d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~ 224 (602)
++++.++.... + +.|.+.|..+++.+.+++. + ..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v---------------------------------------G-~~P 121 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG---------------------------------------G-FLP 121 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE---------------------------------------C-SSC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC---------------------------------------C-CCC
Confidence 45665555443 2 7999999999999876652 1 223
Q ss_pred eEEEEEcCCCCEEEEee----------CCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 225 VFICAWNPVKDFLASGS----------GDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 225 v~~~~~~~~~~~l~s~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
.++++||+++|+++. .++.|.++|..+.+....... . .............+.++|||++
T Consensus 122 --gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v--------~-g~~r~~~g~~P~~~~~spDGk~ 190 (426)
T 3c75_H 122 --HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIEL--------P-DAPRFLVGTYQWMNALTPDNKN 190 (426)
T ss_dssp --EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEE--------T-TCCCCCBSCCGGGSEECTTSSE
T ss_pred --ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEEC--------C-CccccccCCCcceEEEcCCCCE
Confidence 689999999888775 467899999988754321110 0 0000000123567899999999
Q ss_pred EEEEeC--CCeEEEEcCCC-cceeecccccCCeEEEEEccCC-CEEEEEecCCcEEEEeCCCCceeEE----eeeccCCe
Q psy12697 295 LATGSY--DGYARIWTSDG-SLKSTLGQHKGPIFALKWNKRG-NYILSAGVDKTTIIWDAASGQCEQQ----FSFHSAPA 366 (602)
Q Consensus 295 l~~~~~--dg~i~i~~~~~-~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~----~~~~~~~~ 366 (602)
++++.. ++.|.+.|... +....+... + . ....|++ +.+++.+.||.+.+.+..+++.... +.....++
T Consensus 191 lyV~n~~~~~~VsVID~~t~kvv~~I~v~-g-~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~ 266 (426)
T 3c75_H 191 LLFYQFSPAPAVGVVDLEGKTFDRMLDVP-D-C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELL 266 (426)
T ss_dssp EEEEECSSSCEEEEEETTTTEEEEEEECC-S-E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCB
T ss_pred EEEEecCCCCeEEEEECCCCeEEEEEEcC-C-c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCce
Confidence 999874 57899999874 444444321 1 1 2233433 5566677788888888866655432 12222221
Q ss_pred -eeeeccCC-CeEEEeeCCCeEEEEEcCCCcee--eEecc----------CCCCeEEEEECCCCCEEEEEEC--------
Q psy12697 367 -LDVDWQSN-TSFASCSTDQHIHVCKLHSDKPV--KSFEG----------HTNEVNAIKWDPQGLLLASCSD-------- 424 (602)
Q Consensus 367 -~~~~~~~~-~~~~~~~~~~~i~i~d~~~~~~~--~~~~~----------~~~~i~~~~~~~~~~~l~~~~~-------- 424 (602)
..+.+.++ ..++.....+.+.+.|....... ..+.. .......++++|+++.+++...
T Consensus 267 ~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk 346 (426)
T 3c75_H 267 INHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHK 346 (426)
T ss_dssp CSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTT
T ss_pred eeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccccccc
Confidence 12334554 44556667889999998765421 11110 0111223789999888777642
Q ss_pred --CCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCC-EEEEEe-C
Q psy12697 425 --DMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGN-YILSAG-V 500 (602)
Q Consensus 425 --dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~-~ 500 (602)
++.|.++|+.+.+.+.++.... ....+.|+|||+ ++++.. .
T Consensus 347 ~~s~~VsVID~~T~kvv~~I~vg~-----------------------------------~P~gia~spDg~~~lyv~n~~ 391 (426)
T 3c75_H 347 AASRFVVVLNAETGERINKIELGH-----------------------------------EIDSINVSQDAEPLLYALSAG 391 (426)
T ss_dssp SCEEEEEEEETTTCCEEEEEEEEE-----------------------------------EECEEEECCSSSCEEEEEETT
T ss_pred CCCCEEEEEECCCCeEEEEEECCC-----------------------------------CcCeEEEccCCCEEEEEEcCC
Confidence 3579999999998888774321 245678888998 888877 5
Q ss_pred CCeEEEEeCCCCceeeee
Q psy12697 501 DKTTIIWDAASGQCEQQF 518 (602)
Q Consensus 501 dg~i~iwd~~~~~~~~~~ 518 (602)
++.|.++|+.+++.+.++
T Consensus 392 s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 392 TQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTEEEEEETTTCCEEEEE
T ss_pred CCeEEEEECCCCCEEEEe
Confidence 899999999999999887
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.48 E-value=3.5e-11 Score=112.28 Aligned_cols=227 Identities=11% Similarity=0.105 Sum_probs=152.7
Q ss_pred ceeEEeeCCC-CCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEee
Q psy12697 282 DVTSLDWNNN-GSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS 360 (602)
Q Consensus 282 ~i~~~~~~~~-~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 360 (602)
-..+..|+++ +.++++...++.|..||..+.....+ .....+.+++++++|+++++ . ++.|.+||..+++......
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEe
Confidence 3567889995 45566666789999999886554433 24567999999999995544 4 5689999998876544332
Q ss_pred ec----cCCeeeeeccCCCeEEEeeCC----------CeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEE-EECC
Q psy12697 361 FH----SAPALDVDWQSNTSFASCSTD----------QHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLAS-CSDD 425 (602)
Q Consensus 361 ~~----~~~~~~~~~~~~~~~~~~~~~----------~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d 425 (602)
.. ...+..+.+.+++.+.+++.. ..-.+|.+........+..+....+.++|+|+++.|+. .+.+
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGG
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCC
Confidence 21 234677888998887776521 22344444332223333334455789999999987755 4557
Q ss_pred CeEEEEeCC--CCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCe
Q psy12697 426 MTLKIWSLD--KDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKT 503 (602)
Q Consensus 426 g~i~iwd~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~ 503 (602)
+.|.+|++. ++..... + .+ ..+..+......++++++|++.++...++.
T Consensus 171 ~~i~~~~~d~~~G~~~~~-~-------~~---------------------~~~~~~~~~p~g~~~d~~G~lwva~~~~~~ 221 (297)
T 3g4e_A 171 YSVDAFDYDLQTGQISNR-R-------SV---------------------YKLEKEEQIPDGMCIDAEGKLWVACYNGGR 221 (297)
T ss_dssp TEEEEEEECTTTCCEEEE-E-------EE---------------------EECCGGGCEEEEEEEBTTSCEEEEEETTTE
T ss_pred CcEEEEeccCCCCcccCc-E-------EE---------------------EECCCCCCCCCeeEECCCCCEEEEEcCCCE
Confidence 889999873 4432100 0 00 001112345667889999998888888889
Q ss_pred EEEEeCCCCceeeeecccCCCeeEeeec-CCc-eEEEee
Q psy12697 504 TIIWDAASGQCEQQFSFHSAPALDVDWQ-SNT-SFASCS 540 (602)
Q Consensus 504 i~iwd~~~~~~~~~~~~~~~~v~~~~~s-~~~-~l~~~~ 540 (602)
|.+||..+++.+..+..+...+++++|. |++ .|.+++
T Consensus 222 v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred EEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 9999999999999888877789999998 787 444433
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.48 E-value=1.9e-11 Score=114.67 Aligned_cols=240 Identities=12% Similarity=0.059 Sum_probs=160.7
Q ss_pred eeeeeeeccCCceEEEEECCCCC-eEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCcccccccc
Q psy12697 131 ECLNTLTRHTEPVYSVAFSPDGK-FLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIE 209 (602)
Q Consensus 131 ~~~~~l~~h~~~V~~~~~s~d~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (602)
..+..+..+........|+|+|+ ++++...++.|..|+. +++. ..
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~-------------------------------- 80 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DV-------------------------------- 80 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EE--------------------------------
T ss_pred CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EE--------------------------------
Confidence 44555666667778899999998 6667777899999987 4442 11
Q ss_pred ccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeC
Q psy12697 210 IPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWN 289 (602)
Q Consensus 210 ~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 289 (602)
+..+...+..++++++|+++++...++.|..|+.+ +.. ....... .+ .....+..+++.
T Consensus 81 --------~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~------~~~~~~~---~~---~~~~~~~~i~~d 139 (305)
T 3dr2_A 81 --------LLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA------HLLVGRY---AG---KRLNSPNDLIVA 139 (305)
T ss_dssp --------EEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE------EEEECEE---TT---EECSCCCCEEEC
T ss_pred --------EeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE------EEEEecc---CC---CccCCCCCEEEC
Confidence 12244568899999999977766666889999875 321 1111000 00 012346789999
Q ss_pred CCCCeEEE----EeC-------------CCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecC------CcEE
Q psy12697 290 NNGSFLAT----GSY-------------DGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVD------KTTI 346 (602)
Q Consensus 290 ~~~~~l~~----~~~-------------dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~i~ 346 (602)
|+|++.++ |.. .+.|..++........+. .......++|+|+++.|+.+... +.|.
T Consensus 140 ~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~ 218 (305)
T 3dr2_A 140 RDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEIT 218 (305)
T ss_dssp TTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEE
T ss_pred CCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEE
Confidence 99998876 432 356888887533333333 45567899999999988877665 6899
Q ss_pred EEeCCCCceeE--Ee-eeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEE
Q psy12697 347 IWDAASGQCEQ--QF-SFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCS 423 (602)
Q Consensus 347 ~wd~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 423 (602)
+|++..+.... .+ .........+.+.+++.+.++..+ .|.+|+. .++.+..+..+. .+.+++|+|+++.|..++
T Consensus 219 ~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 219 AFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITG 295 (305)
T ss_dssp EEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEE
T ss_pred EEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEc
Confidence 99987654211 11 112334456778888888777754 5999998 566666666554 588999999999998888
Q ss_pred CCCeEE
Q psy12697 424 DDMTLK 429 (602)
Q Consensus 424 ~dg~i~ 429 (602)
.++..+
T Consensus 296 ~~~l~~ 301 (305)
T 3dr2_A 296 GPCLWM 301 (305)
T ss_dssp TTEEEE
T ss_pred CCeEEE
Confidence 765333
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.47 E-value=7.1e-11 Score=115.06 Aligned_cols=236 Identities=10% Similarity=0.017 Sum_probs=158.9
Q ss_pred CceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeC
Q psy12697 141 EPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIG 220 (602)
Q Consensus 141 ~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 220 (602)
.....|+|+++++++++...++.|++||..++....... .
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~----------------------------------------~ 170 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP----------------------------------------G 170 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE----------------------------------------T
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec----------------------------------------c
Confidence 468899999999988888888999999998877653321 1
Q ss_pred CCcceEEEEEcCCCCEEEEeeCCC--cEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEE
Q psy12697 221 HESEVFICAWNPVKDFLASGSGDS--TARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATG 298 (602)
Q Consensus 221 h~~~v~~~~~~~~~~~l~s~~~dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 298 (602)
..... ++|+|+++.|+++..++ .|.+|+...+... . ..... .......+.+++++|++..|+++
T Consensus 171 -~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~-----~-~~g~~------~~~~~~~p~~iav~p~~g~lyv~ 236 (409)
T 3hrp_A 171 -FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP-----T-RIGQL------GSTFSGKIGAVALDETEEWLYFV 236 (409)
T ss_dssp -CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE-----E-EEEEC------CTTSCSCCCBCEECTTSSEEEEE
T ss_pred -CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee-----E-Eeeec------cchhcCCcEEEEEeCCCCeEEEE
Confidence 11223 88999999998888766 6777777544321 0 00000 00023567889999955556667
Q ss_pred eCCCeEEEEcCCCcceeec-----ccccCCe--EEEEEccC-CCEEEEEecCCcEEEEeCCCCceeEEeeec--------
Q psy12697 299 SYDGYARIWTSDGSLKSTL-----GQHKGPI--FALKWNKR-GNYILSAGVDKTTIIWDAASGQCEQQFSFH-------- 362 (602)
Q Consensus 299 ~~dg~i~i~~~~~~~~~~~-----~~~~~~i--~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~-------- 362 (602)
..++.|+.|+..+.....+ ..+...- ..++|+|+ +..+++-..++.|..|+.... ...+...
T Consensus 237 d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~d 314 (409)
T 3hrp_A 237 DSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQD 314 (409)
T ss_dssp CTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBC
T ss_pred ECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCC
Confidence 7788999999875544333 1122222 39999995 555555566789999987643 2222222
Q ss_pred -------cCCeeeeeccCCCeEEEee--CCCeEEEEEcCCCceeeEeccC---------------CCCeEEEEECCCCCE
Q psy12697 363 -------SAPALDVDWQSNTSFASCS--TDQHIHVCKLHSDKPVKSFEGH---------------TNEVNAIKWDPQGLL 418 (602)
Q Consensus 363 -------~~~~~~~~~~~~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~---------------~~~i~~~~~~~~~~~ 418 (602)
-.....+++.+++.++++. .++.|+.|++.++.. ..+.++ -.....++++|+|.+
T Consensus 315 g~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~l 393 (409)
T 3hrp_A 315 GLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGY 393 (409)
T ss_dssp EEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEE
T ss_pred CcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCE
Confidence 1346778888887655554 578999999877653 444333 245889999999888
Q ss_pred EEEEECCCeEEEEeC
Q psy12697 419 LASCSDDMTLKIWSL 433 (602)
Q Consensus 419 l~~~~~dg~i~iwd~ 433 (602)
+++-..+++|+.+++
T Consensus 394 yVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 394 WIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEESTTCEEEEEEE
T ss_pred EEEECCCCeEEEEEe
Confidence 888888888988765
No 219
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.47 E-value=2.3e-08 Score=107.02 Aligned_cols=418 Identities=11% Similarity=0.054 Sum_probs=249.3
Q ss_pred ceeeeecccceeeeee-eccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCC
Q psy12697 121 TLPLWDVERGECLNTL-TRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPP 199 (602)
Q Consensus 121 ~i~vwd~~~~~~~~~l-~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (602)
-|..||..+++..... ..+...|.++...++|.+.+.. .++-+..||..+++......... .
T Consensus 194 Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt-~~~Gl~~~~~~~~~~~~~~~~~~----------~------ 256 (795)
T 4a2l_A 194 GLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVAT-EGAGLFLINPKTKEIKNYLHSPS----------N------ 256 (795)
T ss_dssp CEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEE-BSSCEEEEETTTTEEEEECCCTT----------C------
T ss_pred CEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEE-CCCCeEEEeCCCCeEEEeecCCC----------C------
Confidence 4666776665543321 1245678899888888766644 44448889987765432110000 0
Q ss_pred CCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCC
Q psy12697 200 ESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPS 279 (602)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (602)
+ . .-....|.++...+++.+.+ |+.+ -|.+|+..+.... ...........-.
T Consensus 257 -----------~----~--~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~---------~~~~~~~~~~~l~ 308 (795)
T 4a2l_A 257 -----------P----K--SISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFA---------SYSSNPVENGSLS 308 (795)
T ss_dssp -----------T----T--SCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEE---------EECCCTTSTTSCS
T ss_pred -----------c----c--ccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEE---------EEecCCCCCCCCC
Confidence 0 0 01235688998888877554 4444 4888887654211 0000000011112
Q ss_pred CCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeeccc-------ccCCeEEEEEccCCCEEEEEecCCcEEEEeCCC
Q psy12697 280 NKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQ-------HKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS 352 (602)
Q Consensus 280 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 352 (602)
...|.++...++|. |.+|+.++-|..|+........+.. ....|.++...++|+ |..|+.++-+..||..+
T Consensus 309 ~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~ 386 (795)
T 4a2l_A 309 QRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPIT 386 (795)
T ss_dssp SSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTT
T ss_pred CCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCC
Confidence 46799999999886 5567777778888865433322211 235699999988887 55577777799999887
Q ss_pred CceeEEee--------eccCCeeeeeccCCCe-EEEeeCCCeEEEEEcCCCceeeEec----cCCCCeEEEEECCCCCEE
Q psy12697 353 GQCEQQFS--------FHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE----GHTNEVNAIKWDPQGLLL 419 (602)
Q Consensus 353 ~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~~~i~i~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l 419 (602)
++...... .....|.++...+++. +.+|+.++-|..+|..+++...... .....|.++..+++|.+.
T Consensus 387 ~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lw 466 (795)
T 4a2l_A 387 QRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLW 466 (795)
T ss_dssp CCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEE
T ss_pred CcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEE
Confidence 75543321 1235677888777887 8999988889999998776433221 234579999999988765
Q ss_pred EEEECCCeEEEEeCCCCeeeEeec------cccccEEEEEECCCCCCCCCCCcceeeeeee-----c-------cCCccC
Q psy12697 420 ASCSDDMTLKIWSLDKDNCVHDLQ------AHNKEIYTIKWSPTGPETSNPNMSLIFILKS-----T-------LGQHKG 481 (602)
Q Consensus 420 ~~~~~dg~i~iwd~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~ 481 (602)
+.. .+| +.+||..+++...... .....|.++...+++....... ..+..+.. . ......
T Consensus 467 igt-~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~~~~~~~~~~~l~~~ 543 (795)
T 4a2l_A 467 LGT-LSA-LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDIQKASILPVSNVTKL 543 (795)
T ss_dssp EEE-SSC-EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEEEECCCSCSCGGGGS
T ss_pred EEe-cCc-eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeEEEecCCCCCCCCCC
Confidence 544 444 8889988765433221 1235688888887775433222 22221110 0 012345
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc----cCCCeeEeeecCCceEEEeeCCCcEEEeecCCCCcee
Q psy12697 482 PIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF----HSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVK 557 (602)
Q Consensus 482 ~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~ 557 (602)
.|.++..+++|++.++.. . -|..||..+++... +.. ....|.++...++|.|-.++. +.|..|+..+++ ..
T Consensus 544 ~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~-~~~~~gl~~~~i~~i~~d~~g~lWi~t~-~Gl~~~~~~~~~-~~ 618 (795)
T 4a2l_A 544 FTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIKR-YNTTNGLPNNVVYGILEDSFGRLWLSTN-RGISCFNPETEK-FR 618 (795)
T ss_dssp CEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEE-ECGGGTCSCSCEEEEEECTTSCEEEEET-TEEEEEETTTTE-EE
T ss_pred eeEEEEECCCCCEEEEeC-C-CceeECCCCCcEEE-eCCCCCCchhheEEEEECCCCCEEEEcC-CceEEEcCCCCc-EE
Confidence 789999999998666543 3 48899987665432 221 234688888888884444444 557778876543 22
Q ss_pred eeecccccceEEEEecCCc--EEEEEECCCCCeEEEeccCCeEEee
Q psy12697 558 SFEGHTTGQLVHSYKGTGG--IFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~--i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
.+.. ..|-. ... ..++..+++|. |..|+.+|.++++
T Consensus 619 ~~~~-~dGl~------~~~f~~~~~~~~~~G~-l~~g~~~Gl~~~~ 656 (795)
T 4a2l_A 619 NFTE-SDGLQ------SNQFNTASYCRTSVGQ-MYFGGINGITTFR 656 (795)
T ss_dssp EECG-GGTCS------CSCEEEEEEEECTTSC-EEEEETTEEEEEC
T ss_pred EcCC-cCCCc------cccCccCceeECCCCe-EEEecCCceEEEc
Confidence 2221 11110 112 24677788887 5557778877764
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.47 E-value=1.1e-10 Score=110.52 Aligned_cols=220 Identities=8% Similarity=-0.050 Sum_probs=144.2
Q ss_pred eEEEEEccCCCE-EEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEecc
Q psy12697 324 IFALKWNKRGNY-ILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEG 402 (602)
Q Consensus 324 i~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~ 402 (602)
.....|+|++.. +++...++.|..||..+++.. .+. ....+.++.+.+++.++++..+ .|.+||..+++.......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECS
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEECC-CEEEEECCCCcEEEEeeC
Confidence 457789997554 455556789999999887643 232 2457888999999888887754 599999988775332221
Q ss_pred ----CCCCeEEEEECCCCCEEEEEEC------CCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeee
Q psy12697 403 ----HTNEVNAIKWDPQGLLLASCSD------DMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFIL 472 (602)
Q Consensus 403 ----~~~~i~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 472 (602)
....+..++++|+|+++++... .+.|..++ +++.. .+..
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~---------------------------- 176 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFA---------------------------- 176 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEE----------------------------
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeC----------------------------
Confidence 1235889999999997766542 24455555 33321 1110
Q ss_pred eeccCCccCCeEEEEEccCCCEEEEE-eCCCeEEEEeCC--CC-ce-----eeeecccCCCeeEeeecCCc-eEEEeeCC
Q psy12697 473 KSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAA--SG-QC-----EQQFSFHSAPALDVDWQSNT-SFASCSTD 542 (602)
Q Consensus 473 ~~~~~~~~~~v~~i~~s~~~~~l~s~-~~dg~i~iwd~~--~~-~~-----~~~~~~~~~~v~~~~~s~~~-~l~~~~~d 542 (602)
+......++|+|||+.|+.+ ..++.|.+||+. ++ .. ...+.........+++.++| .+++...+
T Consensus 177 ------~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~ 250 (326)
T 2ghs_A 177 ------DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE 250 (326)
T ss_dssp ------EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT
T ss_pred ------CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCC
Confidence 11234578888899876554 457899999986 55 32 22233234557789999999 55555567
Q ss_pred CcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEEC-CCCCeEEEeccC
Q psy12697 543 QHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWN-SRGDKVGASASD 595 (602)
Q Consensus 543 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s-pdg~~l~~~~~d 595 (602)
+.|.+|+. +++.+..+... ...+.+++|+ ||++.|++++..
T Consensus 251 ~~v~~~d~-~g~~~~~i~~~-----------~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 251 GAVDRYDT-DGNHIARYEVP-----------GKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp TEEEEECT-TCCEEEEEECS-----------CSBEEEEEEESTTSCEEEEEEBC
T ss_pred CEEEEECC-CCCEEEEEECC-----------CCCcEEEEEecCCCCEEEEEecC
Confidence 88999997 45444443322 2458999998 998877666543
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.45 E-value=6.2e-11 Score=111.17 Aligned_cols=236 Identities=9% Similarity=0.020 Sum_probs=154.6
Q ss_pred eeecccccCCeEEEEEccCCCE-EEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeC-CCeEEEEEc
Q psy12697 314 KSTLGQHKGPIFALKWNKRGNY-ILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCST-DQHIHVCKL 391 (602)
Q Consensus 314 ~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~d~ 391 (602)
...+...........|+|+++. +++...++.|..|+. +++ ...+......+..+.+.+++.++++.. ++.|..|+.
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 3344445556788999999984 556667889999997 454 345555666788899999988877765 478999998
Q ss_pred CCCceeeEecc----CCCCeEEEEECCCCCEEEE----EEC-------------CCeEEEEeCCCCeeeEeeccccccEE
Q psy12697 392 HSDKPVKSFEG----HTNEVNAIKWDPQGLLLAS----CSD-------------DMTLKIWSLDKDNCVHDLQAHNKEIY 450 (602)
Q Consensus 392 ~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~i~ 450 (602)
. ++....... ....+..++++|+|++.++ |.. .+.|..||..+++.....
T Consensus 115 ~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-------- 185 (305)
T 3dr2_A 115 D-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-------- 185 (305)
T ss_dssp T-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--------
T ss_pred C-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--------
Confidence 6 443222111 1234678999999998886 321 245666665544322111
Q ss_pred EEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCC------CeEEEEeCCCCcee--eee-ccc
Q psy12697 451 TIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVD------KTTIIWDAASGQCE--QQF-SFH 521 (602)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d------g~i~iwd~~~~~~~--~~~-~~~ 521 (602)
.......++|+||++.|+.+... +.|.+|++..+... ..+ ...
T Consensus 186 ----------------------------~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~ 237 (305)
T 3dr2_A 186 ----------------------------DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVP 237 (305)
T ss_dssp ----------------------------EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCS
T ss_pred ----------------------------cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECC
Confidence 01234568888999988777665 78999998754311 111 112
Q ss_pred CCCeeEeeecCCceEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 522 SAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 522 ~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
......+++.++|.|.++..+ .|.+|+. .++.+.. +.....+..++|+|+++.|++++.++..+++
T Consensus 238 ~~~pdgi~~d~~G~lwv~~~~-gv~~~~~-~g~~~~~------------~~~~~~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 238 DGLPDGFCVDRGGWLWSSSGT-GVCVFDS-DGQLLGH------------IPTPGTASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp SSCCCSEEECTTSCEEECCSS-EEEEECT-TSCEEEE------------EECSSCCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred CCCCCeEEECCCCCEEEecCC-cEEEECC-CCCEEEE------------EECCCceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 344567889999955555544 4999985 3333333 3333457889999999999999998888876
Q ss_pred C
Q psy12697 602 V 602 (602)
Q Consensus 602 v 602 (602)
+
T Consensus 304 ~ 304 (305)
T 3dr2_A 304 L 304 (305)
T ss_dssp C
T ss_pred C
Confidence 4
No 222
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.45 E-value=6.4e-12 Score=119.11 Aligned_cols=166 Identities=11% Similarity=0.104 Sum_probs=126.4
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCCCc----------c-eeecccccCCeEEEEEccCCCEEEEEecCCcEEEEe
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSDGS----------L-KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 349 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~----------~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd 349 (602)
..+..+++++...++++|+.++ +.+|+.+.- . ......+.. |..++| ++++|+++ .++.|++||
T Consensus 38 ~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 4689999999999999999986 445874311 1 112224566 999999 88999988 889999999
Q ss_pred CCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEE
Q psy12697 350 AASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLK 429 (602)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 429 (602)
+.+.........+..++.++.+.+.. +++++.||.+.+||+.++.... +...|++++|+|+| ++.|..||.++
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEE
T ss_pred chhhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEE
Confidence 99887666666777778887776654 8999999999999999877643 34579999999999 78899999999
Q ss_pred EEeCCCCee--eEeec---------cccccEEEEEECCCC
Q psy12697 430 IWSLDKDNC--VHDLQ---------AHNKEIYTIKWSPTG 458 (602)
Q Consensus 430 iwd~~~~~~--~~~~~---------~~~~~i~~~~~~~~~ 458 (602)
+|+...++. ..++. .|...+.++.|.++.
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~ 225 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ 225 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecCC
Confidence 999887764 44451 234555555555543
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.43 E-value=1.9e-10 Score=108.73 Aligned_cols=222 Identities=11% Similarity=0.008 Sum_probs=149.1
Q ss_pred eeEEeeCCCC-CeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeee
Q psy12697 283 VTSLDWNNNG-SFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF 361 (602)
Q Consensus 283 i~~~~~~~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 361 (602)
..+..|+|++ .++++...++.|..|+.++.....+. ....+.++.|+++++++++. .+ .|.+||..+++.......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECS
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeC
Confidence 4677899974 45666667889999998865544433 34679999999999877654 34 599999988875433221
Q ss_pred c----cCCeeeeeccCCCeEEEeeC-------CCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEE-CCCeEE
Q psy12697 362 H----SAPALDVDWQSNTSFASCST-------DQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCS-DDMTLK 429 (602)
Q Consensus 362 ~----~~~~~~~~~~~~~~~~~~~~-------~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~ 429 (602)
. ...+..+.+.+++.+.+++. .+.|+.++ +++. ..+..+......++|+|+++.|+.+. .++.|.
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence 1 13467888999888776654 24666666 4443 33333334578999999998776554 568899
Q ss_pred EEeCC--CC-eeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEE
Q psy12697 430 IWSLD--KD-NCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTII 506 (602)
Q Consensus 430 iwd~~--~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~i 506 (602)
+||+. ++ .... ..+ +. .+.........++++++|++.++...++.|.+
T Consensus 205 ~~d~~~~~Gl~~~~------~~~--~~---------------------~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 205 RVPLDARTGLPTGK------AEV--FI---------------------DSTGIKGGMDGSVCDAEGHIWNARWGEGAVDR 255 (326)
T ss_dssp EEEBCTTTCCBSSC------CEE--EE---------------------ECTTSSSEEEEEEECTTSCEEEEEETTTEEEE
T ss_pred EEEcccccCCcccC------ceE--EE---------------------ECCCCCCCCCeeEECCCCCEEEEEeCCCEEEE
Confidence 99986 44 2100 000 00 00012234467888889988887777788999
Q ss_pred EeCCCCceeeeecccCCCeeEeeec-CCc-eEEEee
Q psy12697 507 WDAASGQCEQQFSFHSAPALDVDWQ-SNT-SFASCS 540 (602)
Q Consensus 507 wd~~~~~~~~~~~~~~~~v~~~~~s-~~~-~l~~~~ 540 (602)
||. +++.+..+..+...+++++|+ |++ .|++++
T Consensus 256 ~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 256 YDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp ECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred ECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 998 577777777777779999998 887 554443
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=3.4e-11 Score=114.88 Aligned_cols=257 Identities=9% Similarity=0.017 Sum_probs=163.0
Q ss_pred CceeEEeeCCCCCeEEEEe--CCCeEEEEcC-CCcceeec-------ccccCCeEEEEEccCCCEEEEEec-----CCcE
Q psy12697 281 KDVTSLDWNNNGSFLATGS--YDGYARIWTS-DGSLKSTL-------GQHKGPIFALKWNKRGNYILSAGV-----DKTT 345 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~--~dg~i~i~~~-~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~-----dg~i 345 (602)
.....++++++|+.+++.. .++.+++|.+ ++.. ..+ ..+...+..++++++++.+++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 4578999999999888864 2342344433 4432 222 234567999999999876555433 5789
Q ss_pred EEEeCCCCceeEEeeecc------CCeeeeeccCC-CeE-EEee---CCCeEEEEEcCCCceeeEeccCCCCeE-EEEEC
Q psy12697 346 IIWDAASGQCEQQFSFHS------APALDVDWQSN-TSF-ASCS---TDQHIHVCKLHSDKPVKSFEGHTNEVN-AIKWD 413 (602)
Q Consensus 346 ~~wd~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~-~~~~---~~~~i~i~d~~~~~~~~~~~~~~~~i~-~~~~~ 413 (602)
.+||+.+++.+..+.... ..+..+++.++ +.+ ++.. .++.|.+||+.+++..+.+.+|..... ...+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 999999998777765432 23567778753 554 4433 578999999998887776665432110 13344
Q ss_pred CCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCC
Q psy12697 414 PQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGN 493 (602)
Q Consensus 414 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~ 493 (602)
++|..+.+.+.++.++.|.. .+..++|+|||+
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~------------------------------------------------~~~gia~s~dg~ 207 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHL------------------------------------------------GVNGIVLDAENE 207 (343)
T ss_dssp ETTEECBEECTTSCEECCCC------------------------------------------------CEEEEEECTTSC
T ss_pred ECCEEEEeccCCCceeceec------------------------------------------------ccceeEeccCCC
Confidence 56666666677776655531 234677888888
Q ss_pred EEEEEeCCC-eEEEEeCC---CCc-----eee--eecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeec
Q psy12697 494 YILSAGVDK-TTIIWDAA---SGQ-----CEQ--QFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEG 561 (602)
Q Consensus 494 ~l~s~~~dg-~i~iwd~~---~~~-----~~~--~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~ 561 (602)
.|+.+..++ .+..++.. .+. ... ...++......++++++| .+++...++.|.+||..+++.. .+..
T Consensus 208 ~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~-~~~~ 286 (343)
T 2qe8_A 208 WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYK-LLVT 286 (343)
T ss_dssp EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEE-EEEE
T ss_pred EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEE-EEEE
Confidence 888887766 45554432 111 011 111344456789999999 7777778899999997444321 1111
Q ss_pred ccccceEEEEecCCcEEEEEECCCCCeEEEeccCC
Q psy12697 562 HTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDG 596 (602)
Q Consensus 562 ~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg 596 (602)
. ..-..+.+++|+++|.++++.+..+
T Consensus 287 ~---------~~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 287 D---------EKLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp C---------GGGSCEEEEEECTTSCEEEEECCGG
T ss_pred C---------CceecCCeeEECCCCcEEEEeCccc
Confidence 1 1124578999999998887776543
No 225
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=6.1e-12 Score=119.27 Aligned_cols=179 Identities=12% Similarity=0.032 Sum_probs=123.1
Q ss_pred CeeeeeccCCC-eEEEeeCCCeEEEEEcCCCc-----------eeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEe
Q psy12697 365 PALDVDWQSNT-SFASCSTDQHIHVCKLHSDK-----------PVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWS 432 (602)
Q Consensus 365 ~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~-----------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 432 (602)
++..+++++.. .+++|+.+ .+.+|++.... +.... .+.. |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 57777887774 45555554 66669865332 21222 3556 999999 99999999 889999999
Q ss_pred CCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC
Q psy12697 433 LDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG 512 (602)
Q Consensus 433 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~ 512 (602)
+++.........+...+. ++.+.+. .++++..||.|.+||+.++
T Consensus 113 v~sl~~~~~~~~~~~~v~----------------------------------~i~~~~p--~~av~~~dG~L~v~dl~~~ 156 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVF----------------------------------QLKNVNN--TLVILNSVNDLSALDLRTK 156 (388)
T ss_dssp SSSTTCEEEEEECSSCEE----------------------------------EEEECSS--EEEEEETTSEEEEEETTTC
T ss_pred chhhhccCccceeeccee----------------------------------eEEecCC--CEEEEECCCCEEEEEccCC
Confidence 987654444444433333 3333332 2888999999999999988
Q ss_pred ceeeeecccCCCeeEeeecCCceEEEeeCCCcEEEeecCCCCc--eeeeecccccceEEEEecCCcEEEEEECCCCCeEE
Q psy12697 513 QCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKP--VKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVG 590 (602)
Q Consensus 513 ~~~~~~~~~~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~ 590 (602)
.... +...|++++|||+| ++.|..||.+++|+...++. .+.+.....-. ....+...|.++.|.+++.+|+
T Consensus 157 ~~~~----~~~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~--~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 157 STKQ----LAQNVTSFDVTNSQ-LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELE--ELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp CEEE----EEESEEEEEECSSE-EEEEETTSCEEEEEEETTEEEEEEEECCCHHHH--TSCTTTSEEEEEEESSSSEEEE
T ss_pred cccc----ccCCceEEEEcCCc-eEEEEcCCcEEEEcCCCccccccceecCCcccc--cccCCCeeEEEEEEecCCeEEE
Confidence 7653 45689999999999 78899999999998766653 44442211000 0000236699999999999988
Q ss_pred Ee
Q psy12697 591 AS 592 (602)
Q Consensus 591 ~~ 592 (602)
+=
T Consensus 230 ~y 231 (388)
T 1xip_A 230 VF 231 (388)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 226
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.41 E-value=1.7e-10 Score=111.83 Aligned_cols=304 Identities=9% Similarity=0.019 Sum_probs=185.7
Q ss_pred CCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC-Cc
Q psy12697 234 KDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD-GS 312 (602)
Q Consensus 234 ~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~-~~ 312 (602)
+..+++++.++.|..+|..+++............ ........+.+. ...++..+++++.++.|..+|.. ++
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~ 124 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG-------WFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGT 124 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC----------CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccc-------cccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCC
Confidence 6678888888999999998876532221110000 000001112111 11235678888999999999976 66
Q ss_pred ceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCe-----eeeeccCCCeEEEeeCCCeEE
Q psy12697 313 LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA-----LDVDWQSNTSFASCSTDQHIH 387 (602)
Q Consensus 313 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~ 387 (602)
.................. +..++.++.++.+..+|..+++.+.......... ..... .++.++++..++.+.
T Consensus 125 ~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-~~~~v~~g~~~g~l~ 201 (376)
T 3q7m_A 125 VAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT-AFGAAVVGGDNGRVS 201 (376)
T ss_dssp EEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE-ETTEEEECCTTTEEE
T ss_pred EEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE-ECCEEEEEcCCCEEE
Confidence 554443322211111222 4578888899999999999999888776543221 11111 257788889999999
Q ss_pred EEEcCCCceeeEeccCCCC-------eEEEEECC--CCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCC
Q psy12697 388 VCKLHSDKPVKSFEGHTNE-------VNAIKWDP--QGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTG 458 (602)
Q Consensus 388 i~d~~~~~~~~~~~~~~~~-------i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~ 458 (602)
.+|..+++.+......... +..+...| .+..++.++.++.+..+|..+++.+...... ...
T Consensus 202 ~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~--~~~-------- 271 (376)
T 3q7m_A 202 AVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG--SVN-------- 271 (376)
T ss_dssp EEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC--CEE--------
T ss_pred EEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC--CCC--------
Confidence 9999999887665532110 00011112 3467788888999999999998877654321 111
Q ss_pred CCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc-cCCCeeEeeecCCceEE
Q psy12697 459 PETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF-HSAPALDVDWQSNTSFA 537 (602)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~l~ 537 (602)
.+.. ++..+..++.++.|..+|..+++.+..... ....+...... ++.|+
T Consensus 272 --------------------------~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-~~~l~ 322 (376)
T 3q7m_A 272 --------------------------DFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY-NGNLV 322 (376)
T ss_dssp --------------------------EEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE-TTEEE
T ss_pred --------------------------CceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE-CCEEE
Confidence 1111 355678888899999999999998766652 22223333332 34888
Q ss_pred EeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEE-EEEECCCCCeEEEeccCCeEEe
Q psy12697 538 SCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIF-EVCWNSRGDKVGASASDGSVFK 600 (602)
Q Consensus 538 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~spdg~~l~~~~~dg~v~i 600 (602)
.++.+|.+.++|..+++.+....... ..+. .... .+..|++++.+|.++.
T Consensus 323 v~~~~g~l~~~d~~tG~~~~~~~~~~-----------~~~~~~~~~--~~~~l~v~~~~G~l~~ 373 (376)
T 3q7m_A 323 VGDSEGYLHWINVEDGRFVAQQKVDS-----------SGFQTEPVA--ADGKLLIQAKDGTVYS 373 (376)
T ss_dssp EECTTSEEEEEETTTCCEEEEEECCT-----------TCBCSCCEE--ETTEEEEEBTTSCEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEecCC-----------CcceeCCEE--ECCEEEEEeCCCEEEE
Confidence 88999999999998888776654321 1111 1111 2567888888887653
No 227
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.41 E-value=3.5e-11 Score=126.37 Aligned_cols=242 Identities=14% Similarity=0.134 Sum_probs=155.3
Q ss_pred ccCCceEEEEECCCCCeEEE-----eeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccC
Q psy12697 138 RHTEPVYSVAFSPDGKFLAS-----GSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQ 212 (602)
Q Consensus 138 ~h~~~V~~~~~s~d~~~l~s-----~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (602)
+|...+..++|||||++||- |+.+..|++||+.+|+.+...
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~---------------------------------- 171 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP---------------------------------- 171 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE----------------------------------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc----------------------------------
Confidence 46667889999999999984 334468999999999865321
Q ss_pred CcceEeeCCCcceEEEEEcCCCCEEEEeeCCCc-------------EEEEeCCCCCCCCCccceEEEEEEecCCCcccC-
Q psy12697 213 SKATKLIGHESEVFICAWNPVKDFLASGSGDST-------------ARIWDMTDSTKKDPKELQIVLRHCISKGGTEVP- 278 (602)
Q Consensus 213 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~-------------i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 278 (602)
+ +......++|+ |++.|+.++.+.. |.+|++.+....... +.. ...
T Consensus 172 -----~--~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~----v~~--------~~~~ 231 (693)
T 3iuj_A 172 -----L--KDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRL----VFG--------AIPA 231 (693)
T ss_dssp -----E--EEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEE----EES--------CSGG
T ss_pred -----c--CCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceE----EEe--------cCCC
Confidence 0 00112456899 9998988887743 888988765421110 000 000
Q ss_pred CCCceeEEeeCCCCCeEEEEeC----CCeEEEEcCCCc--ceeecccccCCeEEEEEccCCCEEEEEec-C---CcEEEE
Q psy12697 279 SNKDVTSLDWNNNGSFLATGSY----DGYARIWTSDGS--LKSTLGQHKGPIFALKWNKRGNYILSAGV-D---KTTIIW 348 (602)
Q Consensus 279 ~~~~i~~~~~~~~~~~l~~~~~----dg~i~i~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d---g~i~~w 348 (602)
+......+.|+|||++|+.... ++.|.++++++. ....+..+....... |++++..|+..+. + +.|..+
T Consensus 232 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~ 310 (693)
T 3iuj_A 232 QHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTV 310 (693)
T ss_dssp GCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEE
T ss_pred CCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEE
Confidence 1234678899999998866543 258999998643 444555555555554 6677776665443 2 679999
Q ss_pred eCCCCce--eEEeeeccCCeeeeeccCCC-eEEE-eeCCC--eEEEEEcCCCceeeEec-cCCCCeEEEEECCCCCEEEE
Q psy12697 349 DAASGQC--EQQFSFHSAPALDVDWQSNT-SFAS-CSTDQ--HIHVCKLHSDKPVKSFE-GHTNEVNAIKWDPQGLLLAS 421 (602)
Q Consensus 349 d~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~--~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~ 421 (602)
|+.++.. ...+..+...+. .|++++ .++. ...++ .|++|++..+. ...+. .....+..+.++|+++.|+.
T Consensus 311 d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~ 387 (693)
T 3iuj_A 311 DAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYF 387 (693)
T ss_dssp ETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEE
T ss_pred eCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEE
Confidence 9988754 234444444444 555543 3444 44454 68889887543 34443 24456778888888887766
Q ss_pred EECC----CeEEEEeCCCCe
Q psy12697 422 CSDD----MTLKIWSLDKDN 437 (602)
Q Consensus 422 ~~~d----g~i~iwd~~~~~ 437 (602)
...+ +.+..||+.+++
T Consensus 388 ~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 388 GFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEECSSSCCEEEEECTTTCC
T ss_pred EecCCCCCCEEEEEECCCCe
Confidence 6554 789999988765
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.39 E-value=9.6e-11 Score=122.00 Aligned_cols=308 Identities=12% Similarity=0.101 Sum_probs=185.1
Q ss_pred CCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEc
Q psy12697 152 GKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWN 231 (602)
Q Consensus 152 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~ 231 (602)
+..|+.++.++.|.-+|..+|+.+-++....... .. ...... ..... ++.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~------------------~~--~~~~~~-----~~~~~----~~~- 119 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRH------------------RA--GEACCD-----AVNRG----VAV- 119 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGG------------------GG--GGCTTC-----SCCCC----CEE-
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCcc------------------cc--cccccc-----CCCCc----cEE-
Confidence 6677777889999999999999987764321100 00 000000 00000 111
Q ss_pred CCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC---CCCeEEEEe------CCC
Q psy12697 232 PVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN---NGSFLATGS------YDG 302 (602)
Q Consensus 232 ~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~------~dg 302 (602)
.+..++.++.|+.|..+|..+++........ .. ......+..+| ++ .++++. .+|
T Consensus 120 -~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~--------~~------~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g 183 (689)
T 1yiq_A 120 -WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTR--------AD------HKRSYTITGAPRVVNG-KVVIGNGGAEFGVRG 183 (689)
T ss_dssp -ETTEEEEECTTSEEEEEETTTCCEEEEEECC--------SC------TTSCCBCCSCCEEETT-EEEECCBCTTTCCBC
T ss_pred -ECCEEEEEccCCEEEEEECCCCCEeeeecCc--------CC------CCCCccccCCcEEECC-EEEEEeCCCccCCCC
Confidence 2567888889999999999988754221110 00 00001111122 34 444443 368
Q ss_pred eEEEEcCC-Ccceeecccc-------------------------------cCCeEEEEEccCCCEEEEEecCCc------
Q psy12697 303 YARIWTSD-GSLKSTLGQH-------------------------------KGPIFALKWNKRGNYILSAGVDKT------ 344 (602)
Q Consensus 303 ~i~i~~~~-~~~~~~~~~~-------------------------------~~~i~~~~~~~~~~~l~~~~~dg~------ 344 (602)
.|..||.. |+.+-.+... ......++++|+...++.++.++.
T Consensus 184 ~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~ 263 (689)
T 1yiq_A 184 YVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKW 263 (689)
T ss_dssp EEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHH
T ss_pred EEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCC
Confidence 89999975 5554443210 011125788888888998887763
Q ss_pred -------------EEEEeCCCCceeEEeeeccCC---------eeeeeccCCC----eEEEeeCCCeEEEEEcCCCceee
Q psy12697 345 -------------TIIWDAASGQCEQQFSFHSAP---------ALDVDWQSNT----SFASCSTDQHIHVCKLHSDKPVK 398 (602)
Q Consensus 345 -------------i~~wd~~~~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~i~i~d~~~~~~~~ 398 (602)
|..+|..+|+.+..++..... ........++ .++.++.+|.++++|..+++++.
T Consensus 264 ~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~ 343 (689)
T 1yiq_A 264 RSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLS 343 (689)
T ss_dssp HHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred CCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEec
Confidence 999999999999887653221 1111111123 47888899999999999999874
Q ss_pred EeccCC-C--------------------------------------CeEEEEECCCCCEEEEEECC--------------
Q psy12697 399 SFEGHT-N--------------------------------------EVNAIKWDPQGLLLASCSDD-------------- 425 (602)
Q Consensus 399 ~~~~~~-~--------------------------------------~i~~~~~~~~~~~l~~~~~d-------------- 425 (602)
...... . .-..++++|+..++++...+
T Consensus 344 ~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~ 423 (689)
T 1yiq_A 344 AKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKR 423 (689)
T ss_dssp EEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCC
T ss_pred cccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccc
Confidence 322110 0 01237889988888877543
Q ss_pred -------------------------------CeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeee
Q psy12697 426 -------------------------------MTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKS 474 (602)
Q Consensus 426 -------------------------------g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (602)
|.|+.||+.+++.+.++..+.
T Consensus 424 ~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~---------------------------- 475 (689)
T 1yiq_A 424 NPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT---------------------------- 475 (689)
T ss_dssp CSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS----------------------------
T ss_pred cccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC----------------------------
Confidence 556666666666555443221
Q ss_pred ccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCC-eeEeeecCCc--eEEEee
Q psy12697 475 TLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP-ALDVDWQSNT--SFASCS 540 (602)
Q Consensus 475 ~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-v~~~~~s~~~--~l~~~~ 540 (602)
++..-.++..+.+++.++.||.++.||.++|+.+..++...+. ..-+.|..+| ++++.+
T Consensus 476 -------~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 476 -------IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp -------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred -------CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEEe
Confidence 1112244457778999999999999999999999888755332 2446677888 444443
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.38 E-value=1.1e-10 Score=121.68 Aligned_cols=331 Identities=10% Similarity=0.058 Sum_probs=188.3
Q ss_pred CCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccC-C-CCce-eEEeeCCCCCeEEEEeCCCeEEEEcCC
Q psy12697 234 KDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVP-S-NKDV-TSLDWNNNGSFLATGSYDGYARIWTSD 310 (602)
Q Consensus 234 ~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~i-~~~~~~~~~~~l~~~~~dg~i~i~~~~ 310 (602)
+..+++++.++.|.-+|..+++......... ...... . ...+ ..++. .+..+++++.|+.|..+|..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~--------~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~ 139 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQS--------DRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAK 139 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCC--------CGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETT
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCC--------CccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECC
Confidence 5667777778889999988887543322110 000000 0 0000 11111 35678889999999999975
Q ss_pred -Ccceeecccc--cCCeEEEEEcc---CCCEEEEEe------cCCcEEEEeCCCCceeEEeeeccC-C------------
Q psy12697 311 -GSLKSTLGQH--KGPIFALKWNK---RGNYILSAG------VDKTTIIWDAASGQCEQQFSFHSA-P------------ 365 (602)
Q Consensus 311 -~~~~~~~~~~--~~~i~~~~~~~---~~~~l~~~~------~dg~i~~wd~~~~~~~~~~~~~~~-~------------ 365 (602)
|+.+-..... ......+..+| ++ .++.++ .+|.|..||..+|+.+..+..... +
T Consensus 140 TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~ 218 (689)
T 1yiq_A 140 TGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIA 218 (689)
T ss_dssp TCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHH
T ss_pred CCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccc
Confidence 6655444321 11111111112 44 444443 368999999999999887653110 0
Q ss_pred ------------------eeeeeccC-CCeEEEeeCCC-------------------eEEEEEcCCCceeeEecc--CC-
Q psy12697 366 ------------------ALDVDWQS-NTSFASCSTDQ-------------------HIHVCKLHSDKPVKSFEG--HT- 404 (602)
Q Consensus 366 ------------------~~~~~~~~-~~~~~~~~~~~-------------------~i~i~d~~~~~~~~~~~~--~~- 404 (602)
-..+.+.+ .+.++++..++ .|..+|..+++.+..++. |.
T Consensus 219 ~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~ 298 (689)
T 1yiq_A 219 AKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDA 298 (689)
T ss_dssp HTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCC
T ss_pred ccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccc
Confidence 01234454 36677777665 399999999998877654 21
Q ss_pred ------CCeEEEEECCCCC---EEEEEECCCeEEEEeCCCCeeeEeeccccc-cEEEEEECCCCCCCC-------CCCcc
Q psy12697 405 ------NEVNAIKWDPQGL---LLASCSDDMTLKIWSLDKDNCVHDLQAHNK-EIYTIKWSPTGPETS-------NPNMS 467 (602)
Q Consensus 405 ------~~i~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~-------~~~~~ 467 (602)
..+.......+|+ .++.++.+|.++++|.++++.+........ ....+.... +..+. .....
T Consensus 299 wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~-~~pi~~~~~~~~~~~~~ 377 (689)
T 1yiq_A 299 WDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT-GRPILDEENAAYWKNGK 377 (689)
T ss_dssp SCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT-TEEEECHHHHCTTTSSS
T ss_pred ccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC-CCcccchhhccccCCCC
Confidence 1222222223565 788999999999999999998865443221 111111000 00000 00000
Q ss_pred eeeeeeeccCCccCCeEEEEEccCCCEEEEEeC---------------------------------------------CC
Q psy12697 468 LIFILKSTLGQHKGPIFALKWNKRGNYILSAGV---------------------------------------------DK 502 (602)
Q Consensus 468 ~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~---------------------------------------------dg 502 (602)
....+.....++ .-..++|+|+..++++... +|
T Consensus 378 ~~~~~p~~~Gg~--~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g 455 (689)
T 1yiq_A 378 RNLVTPAFWGAH--DWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSG 455 (689)
T ss_dssp CEEESSCTTCSS--CSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEE
T ss_pred eeEeCCCccccc--CCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcce
Confidence 001111111111 1223677777776665422 47
Q ss_pred eEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEE
Q psy12697 503 TTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVC 581 (602)
Q Consensus 503 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 581 (602)
.|..||+.+|+.+..+..+. +.....++..+ .+++++.||.++.||.++++.+..++.... ....-+.
T Consensus 456 ~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~----------~~~~p~t 524 (689)
T 1yiq_A 456 KLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASG----------VMAAPVT 524 (689)
T ss_dssp EEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC----------CCSCCEE
T ss_pred eEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCC----------cccCceE
Confidence 89999999999988877543 33444555555 888999999999999998888877654321 1112355
Q ss_pred ECCCCCeE
Q psy12697 582 WNSRGDKV 589 (602)
Q Consensus 582 ~spdg~~l 589 (602)
|..||+..
T Consensus 525 y~~~G~qy 532 (689)
T 1yiq_A 525 YSVDGEQY 532 (689)
T ss_dssp EEETTEEE
T ss_pred EEECCEEE
Confidence 67788643
No 230
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.38 E-value=2.2e-14 Score=138.09 Aligned_cols=221 Identities=13% Similarity=0.116 Sum_probs=125.0
Q ss_pred CCCeEEEEeCCCeEEEEcCC-CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCC-ee-
Q psy12697 291 NGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP-AL- 367 (602)
Q Consensus 291 ~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~-~~- 367 (602)
++..+++++.||.|+.||.. |+....+.. +.+.+..+..++..+++++.||.+..||..+++.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 46789999999999999965 666655554 45555555667777888889999999999999887766543211 11
Q ss_pred eeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccc
Q psy12697 368 DVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNK 447 (602)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 447 (602)
......++.+++++.++.++.||..+++.+..+..+. ...++|++..+++++.|+.|+.||.++++.+..+....
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~- 160 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD- 160 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-
Confidence 1122245678888899999999999999887776553 23556788899999999999999999988776654211
Q ss_pred cEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccC---CCEEEEEeCCCeEEEEeCCCCceeeeecccCCC
Q psy12697 448 EIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKR---GNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 524 (602)
Q Consensus 448 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 524 (602)
+.+ ..++++ ...+++++.||.|+.||..+|+.+..+.. ..+
T Consensus 161 ------~~~-----------------------------~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~p 204 (369)
T 2hz6_A 161 ------YAA-----------------------------SLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASP 204 (369)
T ss_dssp ------ECC-----------------------------BCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSC
T ss_pred ------ccC-----------------------------ccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-CCc
Confidence 100 011111 14567788999999999999998877763 344
Q ss_pred ee-EeeecCCceEEE---eeCCCcEEEeecCCCC
Q psy12697 525 AL-DVDWQSNTSFAS---CSTDQHIHVCKLHSDK 554 (602)
Q Consensus 525 v~-~~~~s~~~~l~~---~~~d~~i~iw~~~~~~ 554 (602)
+. ...+++++.+.. ...++.++.+|..+++
T Consensus 205 v~~~~~~~~dg~~~v~~~~~~~~~l~~ld~~tG~ 238 (369)
T 2hz6_A 205 VVAFYVWQREGLRKVMHINVAVETLRYLTFMSGE 238 (369)
T ss_dssp EEEEEECTTSSCEEECCEEEEHHHHHHHHHHHHH
T ss_pred eEEEEEecCCceEeccceeecccceeeeehhcCC
Confidence 43 445667773211 0114456666655544
No 231
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.38 E-value=6.7e-11 Score=112.02 Aligned_cols=273 Identities=10% Similarity=-0.045 Sum_probs=168.2
Q ss_pred ceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEee----------CCceEEEEecCCceeEEEeeccCceEEEEeC
Q psy12697 121 TLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGS----------FDKCVHIWSARTGQLVHSYKGTGGIFEVCWN 190 (602)
Q Consensus 121 ~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 190 (602)
+|.+.|..+++.+.++..-..+ .+.|+||+++|+.+. .++.|.+||+.+++.+.++..+++
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~------- 117 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA------- 117 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS-------
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCc-------
Confidence 7889999999999999766666 799999999998886 478899999999888766532100
Q ss_pred CCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEe
Q psy12697 191 SRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCI 270 (602)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 270 (602)
.+..
T Consensus 118 ---------------------------------------------------------------~~~~------------- 121 (368)
T 1mda_H 118 ---------------------------------------------------------------PRFS------------- 121 (368)
T ss_dssp ---------------------------------------------------------------CSCC-------------
T ss_pred ---------------------------------------------------------------cccc-------------
Confidence 0000
Q ss_pred cCCCcccCCCCceeEEeeCCCCCeEEEEeC--CCeEEE--EcCCCcceeecccccCCeEEEEEccCC-CEEEEEecCCcE
Q psy12697 271 SKGGTEVPSNKDVTSLDWNNNGSFLATGSY--DGYARI--WTSDGSLKSTLGQHKGPIFALKWNKRG-NYILSAGVDKTT 345 (602)
Q Consensus 271 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~i--~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i 345 (602)
.......++++|||++++++.. +..+.+ +|... ...+.. .+. ..+.|++ ..+++.+.||.+
T Consensus 122 --------~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~ 187 (368)
T 1mda_H 122 --------VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKS-ASC---FHIHPGAAATHYLGSCPASL 187 (368)
T ss_dssp --------BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEEC-SSC---CCCEEEETTEEECCCCTTSC
T ss_pred --------cCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEEC-CCc---eEEccCCCeEEEEEcCCCCE
Confidence 0011234556666666666543 244556 66543 222211 011 1123333 334455667777
Q ss_pred EEEeCCC-----CceeE----EeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCc--eeeEecc-------CC---
Q psy12697 346 IIWDAAS-----GQCEQ----QFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDK--PVKSFEG-------HT--- 404 (602)
Q Consensus 346 ~~wd~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~--~~~~~~~-------~~--- 404 (602)
.+.|+.+ ++... .+.....+. ....++.++..+. +.+.+.|..... .+..+.. +.
T Consensus 188 ~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p 263 (368)
T 1mda_H 188 AASDLAAAPAAAGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRS 263 (368)
T ss_dssp EEEECCSSCCCCEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEE
T ss_pred EEEECccccccCCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccccccc
Confidence 7777776 33221 111222233 2445566666666 999999986542 2222211 00
Q ss_pred CCeEEEEECCCCCEEEEEEC---------CCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeec
Q psy12697 405 NEVNAIKWDPQGLLLASCSD---------DMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKST 475 (602)
Q Consensus 405 ~~i~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (602)
.....++++|+++.++++.. ++.+.++|+.+.+.+.++....
T Consensus 264 ~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~----------------------------- 314 (368)
T 1mda_H 264 AGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH----------------------------- 314 (368)
T ss_dssp CSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-----------------------------
T ss_pred CcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-----------------------------
Confidence 11222789999998887643 2356699999998887765322
Q ss_pred cCCccCCeEEEEEccCCC-EEEEEe-CCCeEEEEeCCCCceeeeecccCCCeeEeeecC
Q psy12697 476 LGQHKGPIFALKWNKRGN-YILSAG-VDKTTIIWDAASGQCEQQFSFHSAPALDVDWQS 532 (602)
Q Consensus 476 ~~~~~~~v~~i~~s~~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~ 532 (602)
....++|+|||+ ++++.. .++.|.++|+.+++.+.++..... ...+++.+
T Consensus 315 ------~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 315 ------DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp ------EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred ------CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence 245677788887 456666 599999999999999998885543 34555543
No 232
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.38 E-value=8.4e-11 Score=123.46 Aligned_cols=241 Identities=8% Similarity=0.041 Sum_probs=155.4
Q ss_pred CCCcceEEEEEcCCCCEEEEe-----eCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 220 GHESEVFICAWNPVKDFLASG-----SGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 220 ~h~~~v~~~~~~~~~~~l~s~-----~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
+|...+..++|||||++||.+ +....|++||+.+++... .... ......++|+ |++.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~-----~~~~------------~~k~~~~~Ws-Dg~~ 187 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLE-----TPLK------------DVKFSGISWL-GNEG 187 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEE-----EEEE------------EEESCCCEEE-TTTE
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCc-----cccC------------CceeccEEEe-CCCE
Confidence 355678899999999988853 233579999999876321 1100 0113578899 9999
Q ss_pred EEEEeCCC-------------eEEEEcCCCcc-----eeeccc-ccCCeEEEEEccCCCEEEEEec----CCcEEEEeCC
Q psy12697 295 LATGSYDG-------------YARIWTSDGSL-----KSTLGQ-HKGPIFALKWNKRGNYILSAGV----DKTTIIWDAA 351 (602)
Q Consensus 295 l~~~~~dg-------------~i~i~~~~~~~-----~~~~~~-~~~~i~~~~~~~~~~~l~~~~~----dg~i~~wd~~ 351 (602)
|+.+..+. .|++|++.... +..... |...+..+.|+|||++|+.... ++.+.++|+.
T Consensus 188 l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~ 267 (693)
T 3iuj_A 188 FFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLS 267 (693)
T ss_dssp EEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETT
T ss_pred EEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECC
Confidence 99888774 38999876332 222233 4456789999999998865443 2589999998
Q ss_pred CCc-eeEEeeeccCCeeeeeccCCCeEEEeeC----CCeEEEEEcCCCce--eeEeccCCCCeEEEEECCCCCEEEEEEC
Q psy12697 352 SGQ-CEQQFSFHSAPALDVDWQSNTSFASCST----DQHIHVCKLHSDKP--VKSFEGHTNEVNAIKWDPQGLLLASCSD 424 (602)
Q Consensus 352 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 424 (602)
++. ....+..+..........+++.++..+. .+.|..+++.++.. ...+..|...+. .|+++++.|+....
T Consensus 268 ~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 268 QENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYM 345 (693)
T ss_dssp STTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEE
T ss_pred CCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEE
Confidence 764 3444444444444433344555554443 36799999988654 345666666655 88999988877765
Q ss_pred CC---eEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCC
Q psy12697 425 DM---TLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVD 501 (602)
Q Consensus 425 dg---~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d 501 (602)
++ .|++||+..+. ...+... ..+.+..+.++++++.++....+
T Consensus 346 ~~g~~~l~~~d~~g~~-~~~l~~p---------------------------------~~~~~~~~~~~~d~~~l~~~~ss 391 (693)
T 3iuj_A 346 VDATARVEQFDYEGKR-VREVALP---------------------------------GLGSVSGFNGKHDDPALYFGFEN 391 (693)
T ss_dssp ETTEEEEEEECTTSCE-EEEECCS---------------------------------SSSEEEECCCCTTCSCEEEEEEC
T ss_pred ECCeeEEEEEECCCCe-eEEeecC---------------------------------CCceEEeeecCCCCCEEEEEecC
Confidence 43 68899887443 2332211 12234455566677666655444
Q ss_pred ----CeEEEEeCCCCce
Q psy12697 502 ----KTTIIWDAASGQC 514 (602)
Q Consensus 502 ----g~i~iwd~~~~~~ 514 (602)
+.++.||+.+++.
T Consensus 392 ~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 392 YAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp SSSCCEEEEECTTTCCE
T ss_pred CCCCCEEEEEECCCCeE
Confidence 7899999987764
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.36 E-value=6.4e-11 Score=112.15 Aligned_cols=264 Identities=9% Similarity=-0.054 Sum_probs=166.0
Q ss_pred cEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEe----------CCCeEEEEcCC-Ccc
Q psy12697 245 TARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGS----------YDGYARIWTSD-GSL 313 (602)
Q Consensus 245 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~i~~~~-~~~ 313 (602)
+|.+.|..+.+....... . ..+ .+.++||+++++++. .++.|.+||.. ++.
T Consensus 47 ~vsvID~~t~~v~~~i~v---------------G-~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLG---------------A-FLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp EEEEEETTTTEEEEEEEE---------------C-TTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred eEEEEECCCCeEEEEEeC---------------C-CCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 788999887754321110 0 133 799999999999886 36889999987 455
Q ss_pred eeecccc-------cCCeEEEEEccCCCEEEEEec--CCcEEE--EeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeC
Q psy12697 314 KSTLGQH-------KGPIFALKWNKRGNYILSAGV--DKTTII--WDAASGQCEQQFSFHSAPALDVDWQSNTSFASCST 382 (602)
Q Consensus 314 ~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~--dg~i~~--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (602)
...+... ......+.++|||++++++.. +..+.+ +|+.+ +..+..... ..+.......+++.+.
T Consensus 109 v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~--~~~~p~g~~~~~~~~~ 183 (368)
T 1mda_H 109 IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC--FHIHPGAAATHYLGSC 183 (368)
T ss_dssp EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC--CCCEEEETTEEECCCC
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc--eEEccCCCeEEEEEcC
Confidence 5555322 123568999999999998874 467888 99877 344432211 1122223345677778
Q ss_pred CCeEEEEEcCC-----Cceee----EeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCe--eeEeeccccccEEE
Q psy12697 383 DQHIHVCKLHS-----DKPVK----SFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDN--CVHDLQAHNKEIYT 451 (602)
Q Consensus 383 ~~~i~i~d~~~-----~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~i~~ 451 (602)
||.+.+.|+.+ ++... .+.....+. . ++++..++..+. +.|.+.|+.+.. .+..+........
T Consensus 184 dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~- 257 (368)
T 1mda_H 184 PASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRK- 257 (368)
T ss_dssp TTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHH-
T ss_pred CCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccc-
Confidence 88888888876 33221 111112233 3 566666666666 899999986432 2221111000000
Q ss_pred EEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeC---------CCeEEEEeCCCCceeeeecccC
Q psy12697 452 IKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGV---------DKTTIIWDAASGQCEQQFSFHS 522 (602)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~ 522 (602)
...........++++||++.+..+.. ++.+.++|+.+++.+..+....
T Consensus 258 -----------------------~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~ 314 (368)
T 1mda_H 258 -----------------------ADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH 314 (368)
T ss_dssp -----------------------HTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE
T ss_pred -----------------------ccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC
Confidence 00001111222678999988876543 2356699999999998887544
Q ss_pred CCeeEeeecCCc--eEEEee-CCCcEEEeecCCCCceeeeec
Q psy12697 523 APALDVDWQSNT--SFASCS-TDQHIHVCKLHSDKPVKSFEG 561 (602)
Q Consensus 523 ~~v~~~~~s~~~--~l~~~~-~d~~i~iw~~~~~~~~~~~~~ 561 (602)
....++|+||| .+++.. .++.|.++|+.+++.+.+++.
T Consensus 315 -~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 315 -DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp -EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred -CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC
Confidence 57899999999 455666 599999999998888777764
No 234
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.34 E-value=9.6e-08 Score=101.98 Aligned_cols=432 Identities=10% Similarity=0.040 Sum_probs=244.7
Q ss_pred ceeeeecccceeeeeee-----ccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEee--------ccCceEEE
Q psy12697 121 TLPLWDVERGECLNTLT-----RHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYK--------GTGGIFEV 187 (602)
Q Consensus 121 ~i~vwd~~~~~~~~~l~-----~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~--------~~~~~~~~ 187 (602)
-|..+|..+++...... -....|.++...++|.+.+ ++.++-|..||..+++...... ....+..+
T Consensus 138 gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i 216 (781)
T 3v9f_A 138 GIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCI 216 (781)
T ss_dssp CEEEEETTTTEEEEESTTTCTTCSCCCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC--------CCSSEEEE
T ss_pred CeeEEECCCCeEEeeccCcccCCCccceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEE
Confidence 46667766655432211 1235688888888887666 4555458889988775433211 12346667
Q ss_pred EeCCCCCCCCCCCCccccccccccCCcceEee--------CCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCC
Q psy12697 188 CWNSRGTPPNPPESMEVDASIEIPQSKATKLI--------GHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDP 259 (602)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 259 (602)
....++........ .. ..+.........+. -....|.++...+++. |..|+..+-|.+++..+......
T Consensus 217 ~~d~~g~lwigt~~-Gl-~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~ 293 (781)
T 3v9f_A 217 YKDTNGNIWIGTSK-GL-ALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLP 293 (781)
T ss_dssp EECTTCCEEEEETT-EE-EEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC-----
T ss_pred EEcCCCCEEEEeCC-cH-heECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeee
Confidence 66666654433221 11 11111111111110 1245688888887776 45556645678888876543211
Q ss_pred ccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecc----------cccCCeEEEEE
Q psy12697 260 KELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLG----------QHKGPIFALKW 329 (602)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~----------~~~~~i~~~~~ 329 (602)
.... .................|.++...++|. |-+|+.++-|..++........+. .....|.++..
T Consensus 294 ~~~~--f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~ 370 (781)
T 3v9f_A 294 EQIR--FEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCD 370 (781)
T ss_dssp ------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEE
T ss_pred eccc--cccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEE
Confidence 1000 0000000001112246799999998886 566777777888887654433331 12356899998
Q ss_pred ccCCCEEEEEecCCcEEEEeCCCCceeEEe---eeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEec--cCC
Q psy12697 330 NKRGNYILSAGVDKTTIIWDAASGQCEQQF---SFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE--GHT 404 (602)
Q Consensus 330 ~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~--~~~ 404 (602)
.++++ |..|+.++-+..||..++...... ......+.++...+++.+.+|+.++-+..++..+++...... ...
T Consensus 371 d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~ 449 (781)
T 3v9f_A 371 DGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNEL 449 (781)
T ss_dssp CTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCC
T ss_pred cCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCC
Confidence 88876 555666666889987654332211 123456778887778888889888889999987765332211 234
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeE
Q psy12697 405 NEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIF 484 (602)
Q Consensus 405 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 484 (602)
..|.++..++++.+. .|+. +-|..||..+++.......... ......|.
T Consensus 450 ~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~i~ 498 (781)
T 3v9f_A 450 LDVRVFYEDKNKKIW-IGTH-AGVFVIDLASKKVIHHYDTSNS-----------------------------QLLENFVR 498 (781)
T ss_dssp CCEEEEEECTTSEEE-EEET-TEEEEEESSSSSCCEEECTTTS-----------------------------SCSCSCEE
T ss_pred CeEEEEEECCCCCEE-EEEC-CceEEEeCCCCeEEecccCccc-----------------------------ccccceeE
Confidence 679999999888654 4555 4588898776543221110000 00135677
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc---cCCCeeEeeecCCceEEEeeCCCcEEEeecCCCCceeeeec
Q psy12697 485 ALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF---HSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEG 561 (602)
Q Consensus 485 ~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~ 561 (602)
++...++|++.+....+| |..||..+++....... ....|.++...++|.|-.++.+|-|..||..+++. ..+..
T Consensus 499 ~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~~~~~-~~~~~ 576 (781)
T 3v9f_A 499 SIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPSARNFDY-QVFQR 576 (781)
T ss_dssp EEEECTTCCEEEEESSSC-EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESCTTTCCC-EEECG
T ss_pred EEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEECCCCCcE-EEccc
Confidence 888888887655443344 88899876654322111 23468899998899555555666558898766542 22211
Q ss_pred ccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 562 HTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 562 ~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
..|- ....|.++..+++|.+.+ ++.+|..+++
T Consensus 577 -~~gl------~~~~i~~i~~d~~g~lW~-~t~~Gl~~~~ 608 (781)
T 3v9f_A 577 -KEGL------PNTHIRAISEDKNGNIWA-STNTGISCYI 608 (781)
T ss_dssp -GGTC------SCCCCCEEEECSSSCEEE-ECSSCEEEEE
T ss_pred -cCCC------CCceEEEEEECCCCCEEE-EcCCceEEEE
Confidence 1110 023577888888887554 4567766654
No 235
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.34 E-value=9.1e-11 Score=121.91 Aligned_cols=313 Identities=7% Similarity=0.014 Sum_probs=184.3
Q ss_pred CCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccC---CCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC
Q psy12697 234 KDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVP---SNKDVTSLDWNNNGSFLATGSYDGYARIWTSD 310 (602)
Q Consensus 234 ~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~ 310 (602)
+..++.++.++.|.-+|..+++.......... ....+ .......+++ ++..+++++.|+.|..+|..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~--------~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~ 146 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQID--------RSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAA 146 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCC--------GGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETT
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCC--------ccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECC
Confidence 55666677778888888877765432221100 00000 0000011222 45678888999999999975
Q ss_pred -Ccceeecccc-c----CCeEEEEEccCCCEEEEEec------CCcEEEEeCCCCceeEEeeeccCCe------------
Q psy12697 311 -GSLKSTLGQH-K----GPIFALKWNKRGNYILSAGV------DKTTIIWDAASGQCEQQFSFHSAPA------------ 366 (602)
Q Consensus 311 -~~~~~~~~~~-~----~~i~~~~~~~~~~~l~~~~~------dg~i~~wd~~~~~~~~~~~~~~~~~------------ 366 (602)
|+.+..+... . ..+..--.. .+..+++++. ++.|..+|..+|+.+..+.......
T Consensus 147 tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g 225 (677)
T 1kb0_A 147 TGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRA 225 (677)
T ss_dssp TCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHH
T ss_pred CCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccc
Confidence 6666555433 1 111110001 2345555553 6899999999999988776432210
Q ss_pred --------------------eeeeccCC-CeEEEeeCCC-------------------eEEEEEcCCCceeeEecc--CC
Q psy12697 367 --------------------LDVDWQSN-TSFASCSTDQ-------------------HIHVCKLHSDKPVKSFEG--HT 404 (602)
Q Consensus 367 --------------------~~~~~~~~-~~~~~~~~~~-------------------~i~i~d~~~~~~~~~~~~--~~ 404 (602)
..+.+.++ +.++++..++ .|..+|..+++.+..++. |.
T Consensus 226 ~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d 305 (677)
T 1kb0_A 226 ARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGD 305 (677)
T ss_dssp HTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTC
T ss_pred cccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCc
Confidence 12344443 5666666553 599999999998877653 21
Q ss_pred -------CCeEEEEECCCC---CEEEEEECCCeEEEEeCCCCeeeEeecccccc-EEEEEECCCCCCCCCC----Cccee
Q psy12697 405 -------NEVNAIKWDPQG---LLLASCSDDMTLKIWSLDKDNCVHDLQAHNKE-IYTIKWSPTGPETSNP----NMSLI 469 (602)
Q Consensus 405 -------~~i~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~----~~~~~ 469 (602)
.....+....+| +.++.++.+|.++++|..+++.+..+...... ...+. ..+...... .....
T Consensus 306 ~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d--~~g~~~~~~~~~~~~~~~ 383 (677)
T 1kb0_A 306 NWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYD--KHGKPIGIAAARDGSKPQ 383 (677)
T ss_dssp CSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEC--TTSCEEECGGGGCTTSCE
T ss_pred ccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccC--CCCceeeccccCcCCCcc
Confidence 122233333467 68999999999999999999988776532211 11110 111000000 00000
Q ss_pred eeeeeccCCccCCeEEEEEccCCCEEEEEeC-------------------------------------------CCeEEE
Q psy12697 470 FILKSTLGQHKGPIFALKWNKRGNYILSAGV-------------------------------------------DKTTII 506 (602)
Q Consensus 470 ~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~-------------------------------------------dg~i~i 506 (602)
..+-....+ . .-..++++|++.++++... .|.|..
T Consensus 384 ~~~P~~~G~-~-~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A 461 (677)
T 1kb0_A 384 DAVPGPYGA-H-NWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLA 461 (677)
T ss_dssp ECSSCTTCS-S-CSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEE
T ss_pred EECcCcccc-c-CCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEE
Confidence 000000111 1 1135778888877776543 278999
Q ss_pred EeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecc
Q psy12697 507 WDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGH 562 (602)
Q Consensus 507 wd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~ 562 (602)
||+.+++.+..+. +..++....+..++ .+++++.||.+++||..+++.+..+...
T Consensus 462 ~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 462 WDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTG 517 (677)
T ss_dssp EETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred EeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCC
Confidence 9999999888776 34455555666666 8888999999999999999988877643
No 236
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.30 E-value=5.2e-12 Score=121.49 Aligned_cols=186 Identities=9% Similarity=0.033 Sum_probs=111.6
Q ss_pred CCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCC-eEEEeeCCCeEEEEEcCCCceeeEeccCCCC-eE-
Q psy12697 332 RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTNE-VN- 408 (602)
Q Consensus 332 ~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~-i~- 408 (602)
++..+++++.||.|..||..+|+.+..+.. ..+.+..+..++ .+++++.|+.|+.||..+++.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 567899999999999999999999988876 444444444454 6677789999999999998876665433211 10
Q ss_pred EEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEE
Q psy12697 409 AIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKW 488 (602)
Q Consensus 409 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 488 (602)
+..+. .+..+++++.|+.|+.||..+++.+..+..+.. ..+
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~--------------------------------------~~~ 126 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA--------------------------------------DSL 126 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC------------------------------------------------------
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc--------------------------------------ccc
Confidence 00111 345678888899999999999988776654320 123
Q ss_pred ccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCC----ceEEEeeCCCcEEEeecCCCCceeeee
Q psy12697 489 NKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSN----TSFASCSTDQHIHVCKLHSDKPVKSFE 560 (602)
Q Consensus 489 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~----~~l~~~~~d~~i~iw~~~~~~~~~~~~ 560 (602)
+|++..+++++.|+.|+.||..+|+.+..+..+. ....++.++ +.+++++.||.|+.||..+++.+....
T Consensus 127 ~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 127 SPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp ------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred cccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 3467788999999999999999999876655322 233344442 567788999999999988887665544
No 237
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.29 E-value=2.6e-10 Score=108.81 Aligned_cols=284 Identities=13% Similarity=0.059 Sum_probs=161.7
Q ss_pred CceEEEEECCCCCeEEEee--CCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEe
Q psy12697 141 EPVYSVAFSPDGKFLASGS--FDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKL 218 (602)
Q Consensus 141 ~~V~~~~~s~d~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 218 (602)
..+..++++|+|+++++.. .++.++||.+.+++.. .+.... ...
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~---------------------------------~~~ 62 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQS---------------------------------GNA 62 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCC---------------------------------SSC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcc---------------------------------cCc
Confidence 6889999999999998864 2343666766555422 221000 001
Q ss_pred eCCCcceEEEEEcCCCCEEEEeeC-----CCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCC
Q psy12697 219 IGHESEVFICAWNPVKDFLASGSG-----DSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGS 293 (602)
Q Consensus 219 ~~h~~~v~~~~~~~~~~~l~s~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 293 (602)
.+|...+..+++.++++++++-.. ++.|.+||+.+++.... ... ......+...+..+++++++.
T Consensus 63 ~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~--------~~~--~~~~~~~~~~~~~v~vd~~~g 132 (343)
T 2qe8_A 63 IITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRV--------IYL--PPPITLSNSFVNDLAVDLIHN 132 (343)
T ss_dssp CCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEE--------EEC--CTTTSCTTCCCCEEEEETTTT
T ss_pred ccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEE--------EEC--ChhhcccccccceEEEecCCC
Confidence 246678999999999876665443 57899999987642110 001 001112234568899998654
Q ss_pred eE-EEEe---CCCeEEEEcCC-CcceeecccccCCeE-EEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCee
Q psy12697 294 FL-ATGS---YDGYARIWTSD-GSLKSTLGQHKGPIF-ALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPAL 367 (602)
Q Consensus 294 ~l-~~~~---~dg~i~i~~~~-~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~ 367 (602)
.+ ++.. .++.|.+||.. +.....+..|..... ...+.++|..+.+.+.++.+..|.
T Consensus 133 ~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~------------------ 194 (343)
T 2qe8_A 133 FVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH------------------ 194 (343)
T ss_dssp EEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC------------------
T ss_pred EEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee------------------
Confidence 54 4444 57889999986 444444433322110 022333444444444444332221
Q ss_pred eeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeE-eecc--
Q psy12697 368 DVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVH-DLQA-- 444 (602)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~-- 444 (602)
..+..++|+|+++.|+.+..++. ++|.+....... .+..
T Consensus 195 -------------------------------------~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~ 236 (343)
T 2qe8_A 195 -------------------------------------LGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAE 236 (343)
T ss_dssp -------------------------------------CCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHH
T ss_pred -------------------------------------cccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhh
Confidence 12567999999998888877663 444432110000 0000
Q ss_pred ccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc-cCC
Q psy12697 445 HNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF-HSA 523 (602)
Q Consensus 445 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~ 523 (602)
....+. ..++......++++++|+++++...++.|.+||..+++....... +..
T Consensus 237 ~~~~~~-------------------------~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~ 291 (343)
T 2qe8_A 237 LGSKIE-------------------------RYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLS 291 (343)
T ss_dssp HHTTCE-------------------------EEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGS
T ss_pred hhcceE-------------------------ecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCcee
Confidence 000000 001223445688999999999988899999999856764333322 234
Q ss_pred CeeEeeecCCc-eEEEeeCCCcEEEee
Q psy12697 524 PALDVDWQSNT-SFASCSTDQHIHVCK 549 (602)
Q Consensus 524 ~v~~~~~s~~~-~l~~~~~d~~i~iw~ 549 (602)
...+++|.+++ .+++.+..+.+.+|.
T Consensus 292 ~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 292 WTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp CEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred cCCeeEECCCCcEEEEeCccccccccc
Confidence 58899999999 666665555554444
No 238
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.28 E-value=5.2e-07 Score=96.34 Aligned_cols=404 Identities=9% Similarity=-0.011 Sum_probs=237.6
Q ss_pred CceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeC
Q psy12697 141 EPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIG 220 (602)
Q Consensus 141 ~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 220 (602)
..|.++...++|+.|-.++.++-+..||..+++...-.... .. . . .-
T Consensus 66 n~I~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~----------~~-----------------~----~--~l 112 (781)
T 3v9f_A 66 NELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNP----------ED-----------------P----Q--SL 112 (781)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTTEEEEECCCT----------TC-----------------S----S--SC
T ss_pred cccceEEEcCCCCEEEEEeCCCCcceECCCCCeEEeecccc----------CC-----------------C----C--Cc
Confidence 45899999988884555667756999998876643210000 00 0 0 00
Q ss_pred CCcceEEEEEcC--CCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEE
Q psy12697 221 HESEVFICAWNP--VKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATG 298 (602)
Q Consensus 221 h~~~v~~~~~~~--~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 298 (602)
....|.++.... ++. |..++.++.+..++..++... ...... ........|.++...+++.+. +|
T Consensus 113 ~~~~i~~i~~d~~~~g~-lwi~t~~~gl~~~~~~~~~~~----------~~~~~~-~~~l~~~~i~~i~~d~~g~lw-ig 179 (781)
T 3v9f_A 113 ITNDVTHITSSVQAGKG-LWVCTYYRGIEYLDIATGKFT----------HYNKST-VPALPSEQTWTATEAEDGKLY-IG 179 (781)
T ss_dssp SCSCEEEEEECSSTTSE-EEEEESSSCEEEEETTTTEEE----------EESTTT-CTTCSCCCEEEEEEEETTEEE-EE
T ss_pred ccCcceEEEecCccCCC-EEEEECCCCeeEEECCCCeEE----------eeccCc-ccCCCccceEEEEECCCCCEE-EE
Confidence 123577887776 554 555664455788887544210 000000 000112457888877777544 46
Q ss_pred eCCCeEEEEcCCCcceeeccc--------ccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEee-------ecc
Q psy12697 299 SYDGYARIWTSDGSLKSTLGQ--------HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS-------FHS 363 (602)
Q Consensus 299 ~~dg~i~i~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~-------~~~ 363 (602)
+.++-+..|+........+.. ....|.++...+++...+ ++.+ -+.+||..+++...... ...
T Consensus 180 t~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~ 257 (781)
T 3v9f_A 180 HVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALS 257 (781)
T ss_dssp ETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEC-----------CC
T ss_pred ecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccC
Confidence 666558888876543333211 135688998888887555 4444 68999987765432211 234
Q ss_pred CCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEec--------------cCCCCeEEEEECCCCCEEEEEECCCeEE
Q psy12697 364 APALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE--------------GHTNEVNAIKWDPQGLLLASCSDDMTLK 429 (602)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~--------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 429 (602)
..+.++...+++.+.+|+..+-|.++|..+.+...... .....|.++..+++|. |..|+.++-|.
T Consensus 258 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~ 336 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGIN 336 (781)
T ss_dssp CCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEE
T ss_pred ceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEE
Confidence 56888888888999999987788899987654321111 1345799999999886 55666666688
Q ss_pred EEeCCCCeeeEee---------ccccccEEEEEECCCCCCCCCCCcceeeeeee----------ccCCccCCeEEEEEcc
Q psy12697 430 IWSLDKDNCVHDL---------QAHNKEIYTIKWSPTGPETSNPNMSLIFILKS----------TLGQHKGPIFALKWNK 490 (602)
Q Consensus 430 iwd~~~~~~~~~~---------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~v~~i~~s~ 490 (602)
.++..+....... ......|.++...+++..........+..+.. ........|.++...+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~ 416 (781)
T 3v9f_A 337 FISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS 416 (781)
T ss_dssp EECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECT
T ss_pred EeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC
Confidence 8887754332211 11235688888877665332221111111110 0122346788999888
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeeec--ccCCCeeEeeecCCceEEEeeCCCcEEEeecCCCCceeeeecccccceE
Q psy12697 491 RGNYILSAGVDKTTIIWDAASGQCEQQFS--FHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLV 568 (602)
Q Consensus 491 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 568 (602)
+|++.+ |..++-|..+|..+++...... .....|.++...+++.|..|+. +.+..|+..+++......... ..
T Consensus 417 ~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~-~~-- 491 (781)
T 3v9f_A 417 EGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSN-SQ-- 491 (781)
T ss_dssp TSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTT-SS--
T ss_pred CCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcc-cc--
Confidence 887655 5666679999988775433221 2345789999988885555555 568889977654332211110 00
Q ss_pred EEEecCCcEEEEEECCCCCeEEEeccCCeEEee
Q psy12697 569 HSYKGTGGIFEVCWNSRGDKVGASASDGSVFKN 601 (602)
Q Consensus 569 ~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i~ 601 (602)
.....|.++..+++|++.+.+..+|..+++
T Consensus 492 ---~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~ 521 (781)
T 3v9f_A 492 ---LLENFVRSIAQDSEGRFWIGTFGGGVGIYT 521 (781)
T ss_dssp ---CSCSCEEEEEECTTCCEEEEESSSCEEEEC
T ss_pred ---cccceeEEEEEcCCCCEEEEEcCCCEEEEe
Confidence 012568899999999877655556766553
No 239
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.24 E-value=7.9e-10 Score=114.89 Aligned_cols=270 Identities=11% Similarity=0.041 Sum_probs=170.1
Q ss_pred CCeEEEEeCCCeEEEEcCC-CcceeecccccC-----------CeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEe
Q psy12697 292 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKG-----------PIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF 359 (602)
Q Consensus 292 ~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~-----------~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 359 (602)
+..+++++.++.|..+|.. |+.+-....... ....+.+ ++..+++++.|+.+..+|..+|+.+..+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 4456666777788888864 554443332211 0112222 3567888899999999999999999887
Q ss_pred eec-c----CCeeeeeccCCCeEEEeeC------CCeEEEEEcCCCceeeEeccCCC-----------------------
Q psy12697 360 SFH-S----APALDVDWQSNTSFASCST------DQHIHVCKLHSDKPVKSFEGHTN----------------------- 405 (602)
Q Consensus 360 ~~~-~----~~~~~~~~~~~~~~~~~~~------~~~i~i~d~~~~~~~~~~~~~~~----------------------- 405 (602)
... . ..+...-...++.+++++. ++.|+.+|..+++.+..+.....
T Consensus 155 ~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~ 234 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK 234 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred cCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCc
Confidence 754 2 1111111112566666654 68999999999998876653221
Q ss_pred ---------CeEEEEECCCCCEEEEEECCC-------------------eEEEEeCCCCeeeEeeccccccEEEEEECCC
Q psy12697 406 ---------EVNAIKWDPQGLLLASCSDDM-------------------TLKIWSLDKDNCVHDLQAHNKEIYTIKWSPT 457 (602)
Q Consensus 406 ---------~i~~~~~~~~~~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 457 (602)
....++++|++..++.++.++ .|..+|.++++.+..++....... .
T Consensus 235 ~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~w----d-- 308 (677)
T 1kb0_A 235 WWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNW----D-- 308 (677)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS----C--
T ss_pred eeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccc----c--
Confidence 113578899999999887764 488999999888777653211100 0
Q ss_pred CCCCCCCCcceeeeeeeccCCccCCeEEEEEccCC---CEEEEEeCCCeEEEEeCCCCceeeeecccC-----------C
Q psy12697 458 GPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRG---NYILSAGVDKTTIIWDAASGQCEQQFSFHS-----------A 523 (602)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------~ 523 (602)
.. ......-+....+| +.++.++.+|.++++|..+|+.+..+.... .
T Consensus 309 ------------------~~-~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~ 369 (677)
T 1kb0_A 309 ------------------YT-STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGK 369 (677)
T ss_dssp ------------------CC-CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSC
T ss_pred ------------------cc-cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCc
Confidence 00 01111222333467 678999999999999999999886654211 0
Q ss_pred Ce------------------------eEeeecCCc-eEEEeeC-------------------------------------
Q psy12697 524 PA------------------------LDVDWQSNT-SFASCST------------------------------------- 541 (602)
Q Consensus 524 ~v------------------------~~~~~s~~~-~l~~~~~------------------------------------- 541 (602)
++ ..++++|++ .+++...
T Consensus 370 ~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~ 449 (677)
T 1kb0_A 370 PIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAE 449 (677)
T ss_dssp EEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSS
T ss_pred eeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccc
Confidence 11 146788887 6655432
Q ss_pred ------CCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeEEe
Q psy12697 542 ------DQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFK 600 (602)
Q Consensus 542 ------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v~i 600 (602)
.|.|..||+.+++.+...+. ..++....++.++.++++++.||.+++
T Consensus 450 ~~~~~~~g~l~A~D~~tG~~~W~~~~------------~~~~~~g~~~~~g~~v~~g~~dg~l~a 502 (677)
T 1kb0_A 450 PPKSKPFGRLLAWDPVAQKAAWSVEH------------VSPWNGGTLTTAGNVVFQGTADGRLVA 502 (677)
T ss_dssp CCCSCCEEEEEEEETTTTEEEEEEEE------------SSSCCCCEEEETTTEEEEECTTSEEEE
T ss_pred cCCCCCccEEEEEeCCCCcEEeecCC------------CCCCcCcceEeCCCEEEEECCCCcEEE
Confidence 26788888877776655542 223333445567778888888887764
No 240
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.21 E-value=5.5e-09 Score=99.09 Aligned_cols=231 Identities=12% Similarity=0.102 Sum_probs=144.0
Q ss_pred cCCCEEEEE-ecCCcEEEEeCCCC----ceeEEee---e----ccCCeeeeeccCCCeEEEeeCC------CeEEEEEcC
Q psy12697 331 KRGNYILSA-GVDKTTIIWDAASG----QCEQQFS---F----HSAPALDVDWQSNTSFASCSTD------QHIHVCKLH 392 (602)
Q Consensus 331 ~~~~~l~~~-~~dg~i~~wd~~~~----~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~------~~i~i~d~~ 392 (602)
+++++|+.. ..+++|.++|+.+. +..+.+. . .......+...|++.++++..+ +.+.++|..
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECC
Confidence 677777654 45788999999755 4555552 1 1123445567788866655555 789999999
Q ss_pred CCceeeEeccCCC---CeEEEEECCCCCEEEEEE-------------------CCCeEEEEeCCCCeeeEeeccccccEE
Q psy12697 393 SDKPVKSFEGHTN---EVNAIKWDPQGLLLASCS-------------------DDMTLKIWSLDKDNCVHDLQAHNKEIY 450 (602)
Q Consensus 393 ~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~~~~~i~ 450 (602)
+.+.+.++..... .-..+.|+|+++.+++.. ...+|.+||+.+++.+.++.....
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~--- 249 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE--- 249 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT---
T ss_pred CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC---
Confidence 9999888863322 234578899999888884 368999999998877776654210
Q ss_pred EEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEE--EEccCCCEEEEEe------CCCeEEEEeCCCCcee--eee--
Q psy12697 451 TIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFAL--KWNKRGNYILSAG------VDKTTIIWDAASGQCE--QQF-- 518 (602)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i--~~s~~~~~l~s~~------~dg~i~iwd~~~~~~~--~~~-- 518 (602)
......+ +|+|+++++..+. .+++|.+|....++.. +.+
T Consensus 250 -----------------------------g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi 300 (462)
T 2ece_A 250 -----------------------------NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEI 300 (462)
T ss_dssp -----------------------------EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEE
T ss_pred -----------------------------CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeC
Confidence 0112233 3477888877766 4668877665544211 111
Q ss_pred cc----------------cCCCeeEeeecCCc-eE-EEeeCCCcEEEeecCCCCceeeeecccccceE---EE---EecC
Q psy12697 519 SF----------------HSAPALDVDWQSNT-SF-ASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLV---HS---YKGT 574 (602)
Q Consensus 519 ~~----------------~~~~v~~~~~s~~~-~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~---~~---~~~~ 574 (602)
.. -......+.+|||| +| ++.-..+.|.+||+..............|..+ .. .+..
T Consensus 301 ~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ 380 (462)
T 2ece_A 301 PAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLT 380 (462)
T ss_dssp CCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCC
T ss_pred CCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCC
Confidence 10 02347789999999 44 45555789999998643211111111111000 00 0001
Q ss_pred CcEEEEEECCCCCeEEEec
Q psy12697 575 GGIFEVCWNSRGDKVGASA 593 (602)
Q Consensus 575 ~~i~~l~~spdg~~l~~~~ 593 (602)
+....+++||||++|+++.
T Consensus 381 ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 381 GAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCCCCEEECTTSSEEEEEC
T ss_pred CCCCEEEEcCCCCEEEEEc
Confidence 2357899999999999988
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.09 E-value=2.6e-08 Score=88.83 Aligned_cols=199 Identities=10% Similarity=0.063 Sum_probs=141.7
Q ss_pred CeEEEEEccCCCEEEEEec--CCcEEEEeCCCCceeEEeeeccC-CeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeE
Q psy12697 323 PIFALKWNKRGNYILSAGV--DKTTIIWDAASGQCEQQFSFHSA-PALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKS 399 (602)
Q Consensus 323 ~i~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~ 399 (602)
....+.|++++...++.+. ++.|.++|+.+++.+..+..... ....+++..+..+++.-.++.+.++|..+.+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEE
Confidence 3578999998754444443 57999999999999988765443 22345666555566666789999999999998888
Q ss_pred eccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCc
Q psy12697 400 FEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQH 479 (602)
Q Consensus 400 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (602)
+...... ...+++||+.|+++..++.|.++|..+.+.+..+...... ..
T Consensus 102 i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~-----------------------------~p 150 (266)
T 2iwa_A 102 FTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNG-----------------------------HR 150 (266)
T ss_dssp EECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETT-----------------------------EE
T ss_pred EECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCC-----------------------------cc
Confidence 8633111 2345567887877777899999999988877766432110 01
Q ss_pred cCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccC-------------CCeeEeeecCCc--eEEEeeCCCc
Q psy12697 480 KGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS-------------APALDVDWQSNT--SFASCSTDQH 544 (602)
Q Consensus 480 ~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------~~v~~~~~s~~~--~l~~~~~d~~ 544 (602)
-..++.+.|. +|+..+....++.|.+.|..+++.+..+.... .....++|+|++ .++++...+.
T Consensus 151 ~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~ 229 (266)
T 2iwa_A 151 VIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPK 229 (266)
T ss_dssp CCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSE
T ss_pred cccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCe
Confidence 1234556666 66666666668899999999999988876421 246899999998 6667778899
Q ss_pred EEEeecCCC
Q psy12697 545 IHVCKLHSD 553 (602)
Q Consensus 545 i~iw~~~~~ 553 (602)
+++.++...
T Consensus 230 v~~i~l~~~ 238 (266)
T 2iwa_A 230 LFEIKLHLV 238 (266)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecc
Confidence 999987654
No 242
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.08 E-value=6.1e-08 Score=100.68 Aligned_cols=307 Identities=10% Similarity=0.048 Sum_probs=178.2
Q ss_pred CCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcce-EEEEE
Q psy12697 152 GKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEV-FICAW 230 (602)
Q Consensus 152 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v-~~~~~ 230 (602)
+..|+.++.++.|.-+|..+|+.+-++........ .... -...+ ..+++
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~--------------------~~~~----------~~~~~~~~~~~ 115 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVK--------------------ARTS----------CCDAVNRGVAL 115 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGG--------------------GGGC----------TTCSCCCCCEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccc--------------------cccc----------cccCCccceEE
Confidence 56677778899999999999999877653211000 0000 00000 00111
Q ss_pred cCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC--CCCeEEEEeC------CC
Q psy12697 231 NPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN--NGSFLATGSY------DG 302 (602)
Q Consensus 231 ~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~------dg 302 (602)
.+..++.++.|+.|..+|..+++........ .. .....+.-+| .+..++++.. +|
T Consensus 116 --~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~--------~~-------~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g 178 (668)
T 1kv9_A 116 --WGDKVYVGTLDGRLIALDAKTGKAIWSQQTT--------DP-------AKPYSITGAPRVVKGKVIIGNGGAEYGVRG 178 (668)
T ss_dssp --EBTEEEEECTTSEEEEEETTTCCEEEEEECS--------CT-------TSSCBCCSCCEEETTEEEECCBCTTTCCBC
T ss_pred --ECCEEEEEcCCCEEEEEECCCCCEeeeeccC--------CC-------CCcceecCCCEEECCEEEEeCCCCCcCCCC
Confidence 2457788888999999999888754322110 00 0000011111 1334555543 58
Q ss_pred eEEEEcCC-Ccceeecccc-------------------------------cCCeEEEEEccCCCEEEEEecCC-------
Q psy12697 303 YARIWTSD-GSLKSTLGQH-------------------------------KGPIFALKWNKRGNYILSAGVDK------- 343 (602)
Q Consensus 303 ~i~i~~~~-~~~~~~~~~~-------------------------------~~~i~~~~~~~~~~~l~~~~~dg------- 343 (602)
.|..+|.. |+.+-.+... ......+++.|+...++.++.++
T Consensus 179 ~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~ 258 (668)
T 1kv9_A 179 FVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREV 258 (668)
T ss_dssp EEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHH
T ss_pred EEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCC
Confidence 89999975 5555443210 00112467888888888887665
Q ss_pred ------------cEEEEeCCCCceeEEeeeccC---------CeeeeeccCCC----eEEEeeCCCeEEEEEcCCCceee
Q psy12697 344 ------------TTIIWDAASGQCEQQFSFHSA---------PALDVDWQSNT----SFASCSTDQHIHVCKLHSDKPVK 398 (602)
Q Consensus 344 ------------~i~~wd~~~~~~~~~~~~~~~---------~~~~~~~~~~~----~~~~~~~~~~i~i~d~~~~~~~~ 398 (602)
.|..+|..+|+.+..++.... +........++ .++.++.+|.++++|..+++.+.
T Consensus 259 ~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~ 338 (668)
T 1kv9_A 259 RSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLIS 338 (668)
T ss_dssp HSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred CCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEec
Confidence 399999999999988775321 11111111233 48888999999999999999874
Q ss_pred EeccCCC------------C------------------------eEEEEECCCCCEEEEEE-------------------
Q psy12697 399 SFEGHTN------------E------------------------VNAIKWDPQGLLLASCS------------------- 423 (602)
Q Consensus 399 ~~~~~~~------------~------------------------i~~~~~~~~~~~l~~~~------------------- 423 (602)
....... + -..++++|+..+++...
T Consensus 339 ~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~ 418 (668)
T 1kv9_A 339 AEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKA 418 (668)
T ss_dssp EEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSS
T ss_pred cccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccc
Confidence 3321110 0 01257777766665532
Q ss_pred -----------------CCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEE
Q psy12697 424 -----------------DDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFAL 486 (602)
Q Consensus 424 -----------------~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 486 (602)
.+|.|..||+.+++.+.+..... +....
T Consensus 419 ~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-----------------------------------~~~~~ 463 (668)
T 1kv9_A 419 FNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-----------------------------------HWNGG 463 (668)
T ss_dssp CCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-----------------------------------SCCCC
T ss_pred cccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-----------------------------------CCcCc
Confidence 22566666766666655443211 11112
Q ss_pred EEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCe-eEeeecCCc--eEEEee
Q psy12697 487 KWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA-LDVDWQSNT--SFASCS 540 (602)
Q Consensus 487 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v-~~~~~s~~~--~l~~~~ 540 (602)
.+...+.+++.++.||.++.||.++|+.+..+....... .-+.+..+| +++.+.
T Consensus 464 ~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 464 TLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred eeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 233467788899999999999999999998887543211 223344566 444443
No 243
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.06 E-value=1.9e-07 Score=88.67 Aligned_cols=239 Identities=10% Similarity=0.062 Sum_probs=149.4
Q ss_pred eeC--CCCCeEEE-EeCCCeEEEEcCCC-----cceeecc------c-ccCCeEEEEEccCCCEEEEEecC------CcE
Q psy12697 287 DWN--NNGSFLAT-GSYDGYARIWTSDG-----SLKSTLG------Q-HKGPIFALKWNKRGNYILSAGVD------KTT 345 (602)
Q Consensus 287 ~~~--~~~~~l~~-~~~dg~i~i~~~~~-----~~~~~~~------~-~~~~i~~~~~~~~~~~l~~~~~d------g~i 345 (602)
.++ +++++|++ +..++.|.++|... +...++. . ....-..+..+|+| .++++..+ |.+
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 446 77777665 55568899999752 2333331 0 11244567788999 66666555 789
Q ss_pred EEEeCCCCceeEEeeeccCC---eeeeeccCCCeEEEeeC--------------------CCeEEEEEcCCCceeeEecc
Q psy12697 346 IIWDAASGQCEQQFSFHSAP---ALDVDWQSNTSFASCST--------------------DQHIHVCKLHSDKPVKSFEG 402 (602)
Q Consensus 346 ~~wd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--------------------~~~i~i~d~~~~~~~~~~~~ 402 (602)
.++|..+++.+..+.....+ ...+-|+|+...+..++ ...|.+||+.+++.+.++..
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 99999999999988744332 34567788866555553 78999999999888777765
Q ss_pred CC--CCeEEEEE--CCCCCEEEEEE------CCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeee
Q psy12697 403 HT--NEVNAIKW--DPQGLLLASCS------DDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFIL 472 (602)
Q Consensus 403 ~~--~~i~~~~~--~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 472 (602)
.. .....+.| +|+++++.+++ .+++|.+|..+.++. ... ..+...+... .. .+...
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~-~~~-------~vIdi~~~~v-~~-----~lp~~ 312 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKW-NAE-------KVIEIPAEPL-EG-----NLPEI 312 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEE-EEE-------EEEEECCEEC-CS-----SCCGG
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCce-eEE-------EEEeCCCccc-cc-----ccccc
Confidence 31 23455656 99999988877 456888887754321 111 1111111000 00 00000
Q ss_pred eeccCCccCCeEEEEEccCCCEEEEEeC-CCeEEEEeCCC---CceeeeecccC--------------CCeeEeeecCCc
Q psy12697 473 KSTLGQHKGPIFALKWNKRGNYILSAGV-DKTTIIWDAAS---GQCEQQFSFHS--------------APALDVDWQSNT 534 (602)
Q Consensus 473 ~~~~~~~~~~v~~i~~s~~~~~l~s~~~-dg~i~iwd~~~---~~~~~~~~~~~--------------~~v~~~~~s~~~ 534 (602)
...+.+-......|.+|+||++|.++.. .+.|.+||+.. .+.+..+.... +.-..++++|||
T Consensus 313 ~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDG 392 (462)
T 2ece_A 313 LKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDG 392 (462)
T ss_dssp GGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTS
T ss_pred ccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCC
Confidence 0000111245778999999999987765 68999999863 34444443221 125789999999
Q ss_pred -eEEEee
Q psy12697 535 -SFASCS 540 (602)
Q Consensus 535 -~l~~~~ 540 (602)
+|+++.
T Consensus 393 k~LyVaN 399 (462)
T 2ece_A 393 RRVYVTN 399 (462)
T ss_dssp SEEEEEC
T ss_pred CEEEEEc
Confidence 777666
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.04 E-value=8.5e-07 Score=80.99 Aligned_cols=218 Identities=11% Similarity=0.009 Sum_probs=136.6
Q ss_pred CceeEEeeCCCCCeEEEE-eCCCeEEEEcCCCcceeecc-cccCCeEEEEEccCCCEEEEE-ecCCcEEEEeCCCCceeE
Q psy12697 281 KDVTSLDWNNNGSFLATG-SYDGYARIWTSDGSLKSTLG-QHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAASGQCEQ 357 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~~~ 357 (602)
..+..++|++++..|+.+ ..++.|..++.++.....+. ........+++++++..|+.+ ...+.|.+++........
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 346899999976555554 45689999998876543332 223567899999976666554 456789999986543322
Q ss_pred EeeeccCCeeeeeccC-CCeEEEeeC---CCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEE-CCCeEEEEe
Q psy12697 358 QFSFHSAPALDVDWQS-NTSFASCST---DQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCS-DDMTLKIWS 432 (602)
Q Consensus 358 ~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd 432 (602)
...........+++.+ ++.+..+.. .+.|..+++..................++++|++..|..+. ..+.|.++|
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 2222224567888888 566655554 36888888764332222222335688999999877665554 567899999
Q ss_pred CCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC
Q psy12697 433 LDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG 512 (602)
Q Consensus 433 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~ 512 (602)
+........+.. ......++.. ++.++++....+.|.++|..++
T Consensus 196 ~~g~~~~~~~~~-----------------------------------~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 196 PAQPGRRKVLEG-----------------------------------LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp TTEEEEEEEEEC-----------------------------------CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTT
T ss_pred cCCCceEEEecC-----------------------------------CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCC
Confidence 875322211110 0111344443 3334444445689999999999
Q ss_pred ceeeeecccC-CCeeEeeecCCc
Q psy12697 513 QCEQQFSFHS-APALDVDWQSNT 534 (602)
Q Consensus 513 ~~~~~~~~~~-~~v~~~~~s~~~ 534 (602)
+.+..+.... .....+++.|++
T Consensus 240 ~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 240 KEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp EEEEEECCSSCCCCCCEEEECSC
T ss_pred CceEEEccccccccceeeecCcc
Confidence 9888876433 246778888776
No 245
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.02 E-value=4.7e-09 Score=103.27 Aligned_cols=330 Identities=11% Similarity=0.106 Sum_probs=188.1
Q ss_pred EEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccc-----------cCCcceEeeCCCc
Q psy12697 155 LASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEI-----------PQSKATKLIGHES 223 (602)
Q Consensus 155 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~h~~ 223 (602)
+.||+..|.|+|+-+.+++.+..+.- |+++...-..... +....+.- .........|. .
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~v--------f~~~~~~g~g~~~-es~~~l~~~~~~~~~~~~~~~g~~~~~~gd-~ 87 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPV--------FNRCSATGWGQTN-ESVRIHERTMSERTKKFLAANGKRIHDNGD-L 87 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEES--------SSCCTTTCTTTBH-HHHHHHHTTCCHHHHHHHHHTTCSSCCCCC-B
T ss_pred EeeCCcCceEEEEecCCcceEEEeee--------ecCCCCcccCCch-hHHHHHhccCCccchhhhhccCceecccCC-C
Confidence 56788999999999999999987763 3332211110000 00000000 00000000111 1
Q ss_pred ceEEEEE---cCCCCEEEEeeC-CCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEee-C-CCCCeEEE
Q psy12697 224 EVFICAW---NPVKDFLASGSG-DSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDW-N-NNGSFLAT 297 (602)
Q Consensus 224 ~v~~~~~---~~~~~~l~s~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~-~~~~~l~~ 297 (602)
.-..+++ .+||++++.... ++.|.+.|+.+.+..... ..+.......+++ + |+++++++
T Consensus 88 hh~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii---------------~ip~g~~phg~~~~~~p~~~~v~~ 152 (595)
T 1fwx_A 88 HHVHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAIL---------------EIPNAKGIHGLRPQKWPRSNYVFC 152 (595)
T ss_dssp CCEEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEE---------------ECSSCCSEEEEEECCSSBCSEEEE
T ss_pred CccccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEE---------------eCCCCCCCcceeeeecCCCcEEEE
Confidence 1133444 337887777655 566999999876542211 1222355778887 5 89999888
Q ss_pred Ee------------------CCCeEEEEcCCCc-ceeecccccCCeEEEEEccCCCEEEEEecCCc--------------
Q psy12697 298 GS------------------YDGYARIWTSDGS-LKSTLGQHKGPIFALKWNKRGNYILSAGVDKT-------------- 344 (602)
Q Consensus 298 ~~------------------~dg~i~i~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-------------- 344 (602)
++ .++.+.++|.+.. ...++.-. +....++++|+|+++++++.+..
T Consensus 153 ~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d 231 (595)
T 1fwx_A 153 NGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMD 231 (595)
T ss_dssp EECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEE
T ss_pred ecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccc
Confidence 84 2457888887743 33333221 24466889999999998886531
Q ss_pred -EEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCC--Cce-eeEeccCCCCeEEEEECCCCCEEE
Q psy12697 345 -TIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHS--DKP-VKSFEGHTNEVNAIKWDPQGLLLA 420 (602)
Q Consensus 345 -i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~--~~~-~~~~~~~~~~i~~~~~~~~~~~l~ 420 (602)
+.+.|....+ .+.+++..... +.|.+.|..+ ++. +..+.. .....++.++|||++++
T Consensus 232 ~v~V~~~~~~~---------------~~v~~Gk~~~i---~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~ 292 (595)
T 1fwx_A 232 HIVVFNIAEIE---------------KAIAAGDYQEL---NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLC 292 (595)
T ss_dssp EEEEEEHHHHH---------------HHHHHTCSEEE---TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEE
T ss_pred eEEEeecccee---------------EeccCCCeeEE---CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEE
Confidence 2233221110 01112211111 5599999998 544 444442 23567899999999887
Q ss_pred EEE-CCCeEEEEeCCCCeeeE--eeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEE
Q psy12697 421 SCS-DDMTLKIWSLDKDNCVH--DLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILS 497 (602)
Q Consensus 421 ~~~-~dg~i~iwd~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s 497 (602)
+++ .+.+|.++|+.+.+... .+... ..+.. .. .-......++|+|+|...++
T Consensus 293 V~~~~s~~VsVid~~~~~~~~~~~l~~~-~~v~~-----------------------~v-~vG~gP~h~aF~~dG~aY~t 347 (595)
T 1fwx_A 293 VAGKLSPTVTVLDVTRFDAVFYENADPR-SAVVA-----------------------EP-ELGLGPLHTAFDGRGNAYTS 347 (595)
T ss_dssp EECTTSSBEEEEEGGGHHHHHHSCCCGG-GGEEE-----------------------CC-BCCSCEEEEEECTTSEEEEE
T ss_pred EeCCCCCeEEEEECcccccccccccCcc-cceEE-----------------------Ec-CCCCCcceEEECCCCeEEEE
Confidence 776 46889999998643110 00000 00000 00 11245678899999954556
Q ss_pred EeCCCeEEEEeCCC----------CceeeeecccCCCe-----eEeeecCCc-eEEEeeC-C-CcE-----------EEe
Q psy12697 498 AGVDKTTIIWDAAS----------GQCEQQFSFHSAPA-----LDVDWQSNT-SFASCST-D-QHI-----------HVC 548 (602)
Q Consensus 498 ~~~dg~i~iwd~~~----------~~~~~~~~~~~~~v-----~~~~~s~~~-~l~~~~~-d-~~i-----------~iw 548 (602)
...|+.|.+||+.+ .+.+..+..|-.+- ..+.++||| +|++... . .++ .++
T Consensus 348 ~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~ 427 (595)
T 1fwx_A 348 LFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLI 427 (595)
T ss_dssp ETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEE
T ss_pred EecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEE
Confidence 67799999999987 45566666554432 344679999 6666543 1 334 888
Q ss_pred ecCCCC
Q psy12697 549 KLHSDK 554 (602)
Q Consensus 549 ~~~~~~ 554 (602)
|+..++
T Consensus 428 dis~~~ 433 (595)
T 1fwx_A 428 DISGDK 433 (595)
T ss_dssp ECSSSS
T ss_pred EcCCCc
Confidence 986555
No 246
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.01 E-value=4.9e-07 Score=82.56 Aligned_cols=247 Identities=11% Similarity=0.018 Sum_probs=147.3
Q ss_pred eEEEEeCCCeEEEEcCCCccee------ecccccCCeEEEEEccCCCEEEEEe-cCCcEEEEeCCCCceeEEeeeccCCe
Q psy12697 294 FLATGSYDGYARIWTSDGSLKS------TLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAASGQCEQQFSFHSAPA 366 (602)
Q Consensus 294 ~l~~~~~dg~i~i~~~~~~~~~------~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~~~~~ 366 (602)
+|+.+.. +.|+.+++++.... .+......+..++|++++..|+.+. ..+.|..++.................
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 4444443 47888887765432 1222234567999999776666554 56789999987665433332223456
Q ss_pred eeeeccCC-CeEE-EeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEEC---CCeEEEEeCCCCeeeEe
Q psy12697 367 LDVDWQSN-TSFA-SCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSD---DMTLKIWSLDKDNCVHD 441 (602)
Q Consensus 367 ~~~~~~~~-~~~~-~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~ 441 (602)
..+++.+. +.++ +-...+.|.++++..................++++|++..|..+.. .+.|..++++... ...
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~ 160 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRI 160 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEE
Confidence 77888764 4544 4455688999998754332222222356789999997666655554 3677777765321 111
Q ss_pred eccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE-eCCCeEEEEeCCCCceeeeecc
Q psy12697 442 LQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAASGQCEQQFSF 520 (602)
Q Consensus 442 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~ 520 (602)
+.. ........++++++++.|..+ ...+.|.++|.........+..
T Consensus 161 ~~~---------------------------------~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~ 207 (267)
T 1npe_A 161 LAQ---------------------------------DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG 207 (267)
T ss_dssp EEC---------------------------------TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC
T ss_pred EEE---------------------------------CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC
Confidence 100 012345678888887666544 4568899999986544333332
Q ss_pred cCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCC
Q psy12697 521 HSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGD 587 (602)
Q Consensus 521 ~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~ 587 (602)
......++.. ++ .+++....+.|.++|..+++.+..+.... ......+++.|++.
T Consensus 208 -~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~----------~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 208 -LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHK----------QTRLYGITIALSQC 263 (267)
T ss_dssp -CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSS----------CCCCCCEEEECSCC
T ss_pred -CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEcccc----------ccccceeeecCccC
Confidence 2234566654 34 44555566899999987776665554211 11356677888764
No 247
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.99 E-value=6.3e-07 Score=91.11 Aligned_cols=267 Identities=11% Similarity=0.078 Sum_probs=148.1
Q ss_pred CCeEEEEeCCCeEEEEcCC-Ccceeeccccc--C--CeE-EEEEcc---CCC-EEEEEec------CCcEEEEeCCCCce
Q psy12697 292 GSFLATGSYDGYARIWTSD-GSLKSTLGQHK--G--PIF-ALKWNK---RGN-YILSAGV------DKTTIIWDAASGQC 355 (602)
Q Consensus 292 ~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~--~--~i~-~~~~~~---~~~-~l~~~~~------dg~i~~wd~~~~~~ 355 (602)
+..+++++.++.|..+|.. |+.+-...... . .+. ...... +++ .+++++. ++.|..+|..+|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 4578888899999999975 66554432211 0 111 111111 233 5655543 78999999999998
Q ss_pred eEEeeeccCCe-----------------------------------------eeeeccC-CCeEEEeeC-----------
Q psy12697 356 EQQFSFHSAPA-----------------------------------------LDVDWQS-NTSFASCST----------- 382 (602)
Q Consensus 356 ~~~~~~~~~~~-----------------------------------------~~~~~~~-~~~~~~~~~----------- 382 (602)
+.........+ ..+++.+ .+.++++..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 87654321100 0112222 255555542
Q ss_pred ---------C----CeEEEEEcCCCceeeEecc--CCC-------CeEEEEEC-CCCC---EEEEEECCCeEEEEeCCCC
Q psy12697 383 ---------D----QHIHVCKLHSDKPVKSFEG--HTN-------EVNAIKWD-PQGL---LLASCSDDMTLKIWSLDKD 436 (602)
Q Consensus 383 ---------~----~~i~i~d~~~~~~~~~~~~--~~~-------~i~~~~~~-~~~~---~l~~~~~dg~i~iwd~~~~ 436 (602)
| +.|..+|..+++.+-.++. |.. ...-+... .+|+ .++.++.+|.++++|..++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 2 5899999999998877653 321 11112222 4674 7888999999999999999
Q ss_pred eeeEeeccccc--cEEEEE-----------ECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe----
Q psy12697 437 NCVHDLQAHNK--EIYTIK-----------WSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG---- 499 (602)
Q Consensus 437 ~~~~~~~~~~~--~i~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~---- 499 (602)
+.+........ ....+. +.|...............+-....++. -..++++|+..++++..
T Consensus 357 ~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~--w~~~a~dp~~g~~yv~~~~~~ 434 (582)
T 1flg_A 357 KLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKN--WNPMAYSQDTGLFYVPANHWK 434 (582)
T ss_dssp CEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSC--SSCCEECTTTCCEEEEEECEE
T ss_pred CEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccC--CCCceECCCCCEEEEechhcc
Confidence 98877654321 112211 111000000000000000000111110 11344555443333321
Q ss_pred -----------------------------CCCeEEEEeCCCCceeeeecccCCCeeEeee-cCCceEEEeeCCCcEEEee
Q psy12697 500 -----------------------------VDKTTIIWDAASGQCEQQFSFHSAPALDVDW-QSNTSFASCSTDQHIHVCK 549 (602)
Q Consensus 500 -----------------------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-s~~~~l~~~~~d~~i~iw~ 549 (602)
.+|.|..||+.+++.+....... ++..-.. ..++.++.++.|+.++.||
T Consensus 435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D 513 (582)
T 1flg_A 435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFD 513 (582)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEE
T ss_pred eeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEE
Confidence 36889999999999887665432 2222222 2345888899999999999
Q ss_pred cCCCCceeeeec
Q psy12697 550 LHSDKPVKSFEG 561 (602)
Q Consensus 550 ~~~~~~~~~~~~ 561 (602)
.++++.+..++.
T Consensus 514 ~~tG~~lW~~~~ 525 (582)
T 1flg_A 514 AKSGKELWKFQT 525 (582)
T ss_dssp TTTCCEEEEEEC
T ss_pred CCCCCEEEEecC
Confidence 988888877654
No 248
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.99 E-value=3.7e-07 Score=92.51 Aligned_cols=316 Identities=8% Similarity=-0.002 Sum_probs=166.2
Q ss_pred CCEEEEeeC-CCcEEEEeC-CCCCCCCCccceEEEEEEecCCCcc-cCCCCceeEEeeCCCCCe----EEEEeCCCeEEE
Q psy12697 234 KDFLASGSG-DSTARIWDM-TDSTKKDPKELQIVLRHCISKGGTE-VPSNKDVTSLDWNNNGSF----LATGSYDGYARI 306 (602)
Q Consensus 234 ~~~l~s~~~-dg~i~iw~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~----l~~~~~dg~i~i 306 (602)
+..++.++. ++.|.-+|. .+++........... .... .........+++.|.+.. +++++.|+.+..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~------~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~A 135 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNP------AARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAA 135 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCG------GGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCc------cccccccccccccceEEEecCCcceeEEEEEcCCCEEEE
Confidence 445556665 677777777 666643222111000 0000 000000122344343444 888889999999
Q ss_pred EcCC-Ccceeeccccc----CCeEE-EEEccCCCEEEEEe------cCCcEEEEeCCCCceeEEeeeccCCee-------
Q psy12697 307 WTSD-GSLKSTLGQHK----GPIFA-LKWNKRGNYILSAG------VDKTTIIWDAASGQCEQQFSFHSAPAL------- 367 (602)
Q Consensus 307 ~~~~-~~~~~~~~~~~----~~i~~-~~~~~~~~~l~~~~------~dg~i~~wd~~~~~~~~~~~~~~~~~~------- 367 (602)
+|.. |+.+-...... ..+.+ ... .++ .+++++ .+|.|..+|..+|+.+..+........
T Consensus 136 lDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~ 213 (599)
T 1w6s_A 136 LNAETGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDF 213 (599)
T ss_dssp EETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTT
T ss_pred EECCCCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccc
Confidence 9964 65554432111 01111 111 133 455554 379999999999999887764322100
Q ss_pred -------------------------------eeecc-CCCeEEEeeCC----------------CeEEEEEcCCCceeeE
Q psy12697 368 -------------------------------DVDWQ-SNTSFASCSTD----------------QHIHVCKLHSDKPVKS 399 (602)
Q Consensus 368 -------------------------------~~~~~-~~~~~~~~~~~----------------~~i~i~d~~~~~~~~~ 399 (602)
.+++. ..+.++.+..+ +.|..+|..+++.+-.
T Consensus 214 ~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~ 293 (599)
T 1w6s_A 214 NIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFG 293 (599)
T ss_dssp TTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEE
T ss_pred ccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeE
Confidence 11222 23556666554 3899999999998876
Q ss_pred eccCCC---------CeEEEEEC-CCC---CEEEEEECCCeEEEEeCCCCeeeEeeccccc--cEEEEEECCCCCCC---
Q psy12697 400 FEGHTN---------EVNAIKWD-PQG---LLLASCSDDMTLKIWSLDKDNCVHDLQAHNK--EIYTIKWSPTGPET--- 461 (602)
Q Consensus 400 ~~~~~~---------~i~~~~~~-~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~--- 461 (602)
++.... ...-+... .+| +.++.++.+|.+.++|.++++.+........ ....+.. +.+...
T Consensus 294 ~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~-~~g~p~~~~ 372 (599)
T 1w6s_A 294 YQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDL-KTGQPVRDP 372 (599)
T ss_dssp EESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECT-TTCCEEECG
T ss_pred eecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccccc-CCCceeecc
Confidence 654221 11112222 567 5678889999999999999998876543210 0111100 000000
Q ss_pred ---CCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE---------------------------------e------
Q psy12697 462 ---SNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA---------------------------------G------ 499 (602)
Q Consensus 462 ---~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~---------------------------------~------ 499 (602)
..........+-..+.++. -..++++|+..++++. +
T Consensus 373 ~~~~~~~~~~~~~~P~~~Gg~~--w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~ 450 (599)
T 1w6s_A 373 EYGTRMDHLAKDICPSAMGYHN--QGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYE 450 (599)
T ss_dssp GGCCCTTCCEEEESSCTTCSSC--SCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTB
T ss_pred ccCCCCCCCccEeccCcccccC--CCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCC
Confidence 0000000011111111111 1123334333333221 1
Q ss_pred CCCeEEEEeCCCCceeeeecccCCCeeEeeec-CCceEEEeeCCCcEEEeecCCCCceeeeec
Q psy12697 500 VDKTTIIWDAASGQCEQQFSFHSAPALDVDWQ-SNTSFASCSTDQHIHVCKLHSDKPVKSFEG 561 (602)
Q Consensus 500 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~ 561 (602)
.+|.|..||+.+++.+..... ..+...-... ..+.++.++.|+.++.||.++++.+..++.
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l 512 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKI 512 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CcCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeC
Confidence 358899999999998876652 2222222222 344777899999999999999888877653
No 249
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.97 E-value=1.2e-07 Score=83.22 Aligned_cols=184 Identities=11% Similarity=0.129 Sum_probs=129.4
Q ss_pred eEEEEEccCCCEEEEEecCC--cEEEEeCCCCceeEEeeeccCCe-eeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEe
Q psy12697 324 IFALKWNKRGNYILSAGVDK--TTIIWDAASGQCEQQFSFHSAPA-LDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSF 400 (602)
Q Consensus 324 i~~~~~~~~~~~l~~~~~dg--~i~~wd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~ 400 (602)
...+.|+ ++..+.+.+.+| .|+.+|+.+++.+..+....... ..+....+..+++.-.++.+.++|..+.+.+.++
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 4788898 666666777766 89999999999999887654432 2355555555666667899999999999999888
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCcc
Q psy12697 401 EGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHK 480 (602)
Q Consensus 401 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (602)
..... ...++++++.|+.+..++.|.++|..+.+.+.++...... ..-
T Consensus 124 ~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g-----------------------------~~~ 171 (262)
T 3nol_A 124 NYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG-----------------------------EEL 171 (262)
T ss_dssp ECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT-----------------------------EEC
T ss_pred ECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC-----------------------------ccc
Confidence 75332 2333456777777777888999999998877776532100 001
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccc------------CCCeeEeeecCCc-eEEEeeC
Q psy12697 481 GPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH------------SAPALDVDWQSNT-SFASCST 541 (602)
Q Consensus 481 ~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------------~~~v~~~~~s~~~-~l~~~~~ 541 (602)
..++.+.|. +|+..+..-.+..|.+.|..+++.+..+... .+-.+.++|+|++ .|++.+.
T Consensus 172 ~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 172 PELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp CCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 223445554 6766666667889999999999998777642 1246889999988 6655553
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.97 E-value=1e-07 Score=98.99 Aligned_cols=199 Identities=12% Similarity=0.080 Sum_probs=125.8
Q ss_pred CCeEEEEeCCCeEEEEcCC-CcceeecccccC----------Ce-EEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEe
Q psy12697 292 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKG----------PI-FALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF 359 (602)
Q Consensus 292 ~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~----------~i-~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 359 (602)
+..+++++.++.|..+|.. |+.+-....... .+ ..+.+ .+..++.++.|+.|..+|..+|+.+..+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 4467777778888888864 555444432111 00 11222 2457888889999999999999999887
Q ss_pred eeccCC-eeeeecc---CCCeEEEeeC------CCeEEEEEcCCCceeeEeccCC-------------------------
Q psy12697 360 SFHSAP-ALDVDWQ---SNTSFASCST------DQHIHVCKLHSDKPVKSFEGHT------------------------- 404 (602)
Q Consensus 360 ~~~~~~-~~~~~~~---~~~~~~~~~~------~~~i~i~d~~~~~~~~~~~~~~------------------------- 404 (602)
...... ...+... .++.++++.. +|.|+.+|..+++.+..+....
T Consensus 144 ~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w 223 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW 223 (668)
T ss_dssp ECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred ccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcccee
Confidence 653211 1111111 2566666654 5899999999999887664210
Q ss_pred ------CCeEEEEECCCCCEEEEEECCCe-------------------EEEEeCCCCeeeEeeccccccEEEEEECCCCC
Q psy12697 405 ------NEVNAIKWDPQGLLLASCSDDMT-------------------LKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGP 459 (602)
Q Consensus 405 ------~~i~~~~~~~~~~~l~~~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~ 459 (602)
.....++++|+..+++.++.++. |..+|.++++.+..++......... +
T Consensus 224 ~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~----~-- 297 (668)
T 1kv9_A 224 KLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDF----T-- 297 (668)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC----C--
T ss_pred eeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccc----c--
Confidence 01124788898889988887764 8899999998887765421110000 0
Q ss_pred CCCCCCcceeeeeeeccCCccCCeEEEEEccCCC---EEEEEeCCCeEEEEeCCCCceeee
Q psy12697 460 ETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGN---YILSAGVDKTTIIWDAASGQCEQQ 517 (602)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~---~l~s~~~dg~i~iwd~~~~~~~~~ 517 (602)
...+.....+..+|+ .++.++.+|.++++|..+|+.+..
T Consensus 298 -------------------~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 339 (668)
T 1kv9_A 298 -------------------ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISA 339 (668)
T ss_dssp -------------------CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred -------------------CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecc
Confidence 011222222233564 688999999999999999998743
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.95 E-value=1.5e-06 Score=88.34 Aligned_cols=264 Identities=9% Similarity=0.019 Sum_probs=150.7
Q ss_pred CCeEEEEeCCCeEEEEcCC-Ccceeeccccc--C--CeEE-EEEccCCCEEEEEec------CCcEEEEeCCCCceeEEe
Q psy12697 292 GSFLATGSYDGYARIWTSD-GSLKSTLGQHK--G--PIFA-LKWNKRGNYILSAGV------DKTTIIWDAASGQCEQQF 359 (602)
Q Consensus 292 ~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~--~--~i~~-~~~~~~~~~l~~~~~------dg~i~~wd~~~~~~~~~~ 359 (602)
+..+++++.++.+..+|.. |+.+-...... . .+.+ ... .+..+++++. ++.|..+|..+++.+..+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 5578888889999999974 65554432111 0 1111 111 1345666654 789999999999998877
Q ss_pred eeccCCe--------------------------------------eeeeccC-CCeEEEeeCC----------------C
Q psy12697 360 SFHSAPA--------------------------------------LDVDWQS-NTSFASCSTD----------------Q 384 (602)
Q Consensus 360 ~~~~~~~--------------------------------------~~~~~~~-~~~~~~~~~~----------------~ 384 (602)
....... ..+++.+ .+.++.+..+ +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 5432110 0122333 2455555432 3
Q ss_pred eEEEEEcCCCceeeEeccC--CC-------CeEEEEECCCCC---EEEEEECCCeEEEEeCCCCeeeEeecccc--ccEE
Q psy12697 385 HIHVCKLHSDKPVKSFEGH--TN-------EVNAIKWDPQGL---LLASCSDDMTLKIWSLDKDNCVHDLQAHN--KEIY 450 (602)
Q Consensus 385 ~i~i~d~~~~~~~~~~~~~--~~-------~i~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~i~ 450 (602)
.|..+|..+++.+-.++.. .. ...-+...++|+ .++.++.+|.+.++|..+++.+....... ....
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 6999999999988766532 11 111122234674 67788899999999999999887765322 1111
Q ss_pred EEEECCCCCCCCC------CCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe-------------------------
Q psy12697 451 TIKWSPTGPETSN------PNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG------------------------- 499 (602)
Q Consensus 451 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~------------------------- 499 (602)
.+.... +..... ........+.....++. -..++++|+..+++...
T Consensus 353 ~~d~~~-g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~--w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 353 KVDLKT-GTPVRDPEFATRMDHKGTNICPSAMGFHN--QGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp EECTTT-CSEEECGGGCCCTTCCEEEESSCTTCSSC--SCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred cccccC-CceecccccCCCCCCCceEECCCCccccC--CCCceECCCCCEEEEEchhccccccccccccccCCccccccc
Confidence 111000 000000 00000000001111111 12456666655555442
Q ss_pred ------------CCCeEEEEeCCCCceeeeecccCCCeeEeeec-CCceEEEeeCCCcEEEeecCCCCceeeeec
Q psy12697 500 ------------VDKTTIIWDAASGQCEQQFSFHSAPALDVDWQ-SNTSFASCSTDQHIHVCKLHSDKPVKSFEG 561 (602)
Q Consensus 500 ------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~ 561 (602)
.+|.|..||+.+++.+.++... .++....+. .++.+++++.|+.|+.||.++++.+..++.
T Consensus 430 ~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp EEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 3588999999999988777633 333333333 344777899999999999998888877653
No 252
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.95 E-value=1.1e-07 Score=93.73 Aligned_cols=247 Identities=7% Similarity=0.032 Sum_probs=146.3
Q ss_pred cCCCEEEEEec-CCcEEEEeCCCCceeEEeeecc-CCeeeeec-c-CCC-eEEEee------------------CCCeEE
Q psy12697 331 KRGNYILSAGV-DKTTIIWDAASGQCEQQFSFHS-APALDVDW-Q-SNT-SFASCS------------------TDQHIH 387 (602)
Q Consensus 331 ~~~~~l~~~~~-dg~i~~wd~~~~~~~~~~~~~~-~~~~~~~~-~-~~~-~~~~~~------------------~~~~i~ 387 (602)
+||+++..... ++.|.+.|+.+.++...+.... .....+.+ . |++ .+++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 47888877665 5579999999999888665432 34556665 3 554 444442 245799
Q ss_pred EEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCC---------------eEEEEeCCCCeeeEeecccc---ccE
Q psy12697 388 VCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDM---------------TLKIWSLDKDNCVHDLQAHN---KEI 449 (602)
Q Consensus 388 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---------------~i~iwd~~~~~~~~~~~~~~---~~i 449 (602)
++|..+.+.+.++.-.. ....++++|+|+++++.+.+. .|.+.|....+... -.+.. +.|
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v-~~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAI-AAGDYQELNGV 256 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHH-HHTCSEEETTE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEec-cCCCeeEECcE
Confidence 99999998887776433 456788999999999998763 35666643221100 00000 111
Q ss_pred EEEEECCCCCCCCCCCcce-eeeeeeccCCccCCeEEEEEccCCCEEEEEe-CCCeEEEEeCCCCc------------ee
Q psy12697 450 YTIKWSPTGPETSNPNMSL-IFILKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAASGQ------------CE 515 (602)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~dg~i~iwd~~~~~------------~~ 515 (602)
.-+...... ... ...+ .-.....++.++|||+++++++ .+.+|.++|+.+.+ ..
T Consensus 257 ~VID~~~~~-------~~~~~~~I-----pvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~ 324 (595)
T 1fwx_A 257 KVVDGRKEA-------SSLFTRYI-----PIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV 324 (595)
T ss_dssp EEEECSGGG-------CCSSEEEE-----EEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEE
T ss_pred EEEeCcccC-------CceeEEEE-----ecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceE
Confidence 111111000 000 0000 0112446799999999877665 57899999999653 23
Q ss_pred eeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcE------EEEEECCCCCe
Q psy12697 516 QQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGI------FEVCWNSRGDK 588 (602)
Q Consensus 516 ~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i------~~l~~spdg~~ 588 (602)
.... -......++|+|+| .+++.-.|+.|.+||+.... ..+.+....+.+..+..+-.. ..+.++|||++
T Consensus 325 ~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~--~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~ 401 (595)
T 1fwx_A 325 AEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAI--RAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDW 401 (595)
T ss_dssp ECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHH--HHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSE
T ss_pred EEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhh--hhhcccccceeEEEeecccccccceeccceEeCCCCCE
Confidence 3333 23457789999999 66677889999999987611 011111111222222222222 12246899999
Q ss_pred EEEecc
Q psy12697 589 VGASAS 594 (602)
Q Consensus 589 l~~~~~ 594 (602)
|+++..
T Consensus 402 l~~~Nk 407 (595)
T 1fwx_A 402 LVCLSK 407 (595)
T ss_dssp EEEEES
T ss_pred EEEcCC
Confidence 998765
No 253
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.94 E-value=6.7e-07 Score=79.72 Aligned_cols=206 Identities=6% Similarity=0.026 Sum_probs=134.6
Q ss_pred eeEEeeeccC-CeeeeeccCCCeEEEeeC---CCeEEEEEcCCCceeeEeccCCC-CeEEEEECCCCCEEEE-EECCCeE
Q psy12697 355 CEQQFSFHSA-PALDVDWQSNTSFASCST---DQHIHVCKLHSDKPVKSFEGHTN-EVNAIKWDPQGLLLAS-CSDDMTL 428 (602)
Q Consensus 355 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~i~i~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~-~~~dg~i 428 (602)
.+..+..... ....+.+++++.++.++. ++.|.++|+.+++.+..+.-... ....++++ ++.|.. .-.++.+
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v 88 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIG 88 (266)
T ss_dssp EEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEE
T ss_pred EEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEE
Confidence 3444543332 356788888777666643 58999999999998887653222 23345555 445544 4467899
Q ss_pred EEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEe
Q psy12697 429 KIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 508 (602)
Q Consensus 429 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd 508 (602)
.++|..+.+.+.++... . |. ...+++||+.++++..++.|.++|
T Consensus 89 ~viD~~t~~v~~~i~~g-~--------~~---------------------------g~glt~Dg~~l~vs~gs~~l~viD 132 (266)
T 2iwa_A 89 FIYDRRTLSNIKNFTHQ-M--------KD---------------------------GWGLATDGKILYGSDGTSILYEID 132 (266)
T ss_dssp EEEETTTTEEEEEEECC-S--------SS---------------------------CCEEEECSSSEEEECSSSEEEEEC
T ss_pred EEEECCCCcEEEEEECC-C--------CC---------------------------eEEEEECCCEEEEECCCCeEEEEE
Confidence 99999999888776432 0 00 122455777777777789999999
Q ss_pred CCCCceeeeecccC-----CCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccce--EEEEecCCcEEEE
Q psy12697 509 AASGQCEQQFSFHS-----APALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQL--VHSYKGTGGIFEV 580 (602)
Q Consensus 509 ~~~~~~~~~~~~~~-----~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~l 580 (602)
..+.+.+..+.... ..+..+.|. ++ .++....++.|.+.|..+++.+..++....... ............+
T Consensus 133 ~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGI 211 (266)
T 2iwa_A 133 PHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGI 211 (266)
T ss_dssp TTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEE
T ss_pred CCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEE
Confidence 99998887776322 135677888 67 555555688999999999998888764210000 0000011346899
Q ss_pred EECCCCCeEEEecc-CCeEE
Q psy12697 581 CWNSRGDKVGASAS-DGSVF 599 (602)
Q Consensus 581 ~~spdg~~l~~~~~-dg~v~ 599 (602)
+|+|+++.|++++. .+.++
T Consensus 212 a~~~~~~~lfVTgk~~~~v~ 231 (266)
T 2iwa_A 212 AWDQENKRIFVTGKLWPKLF 231 (266)
T ss_dssp EEETTTTEEEEEETTCSEEE
T ss_pred EEcCCCCEEEEECCCCCeEE
Confidence 99999987766664 45444
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.93 E-value=1.9e-07 Score=81.98 Aligned_cols=189 Identities=8% Similarity=0.010 Sum_probs=129.4
Q ss_pred eeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCC-CeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeecc
Q psy12697 366 ALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTN-EVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQA 444 (602)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 444 (602)
...+.|..+..+.+.+.+|.|+.+|+.+++.+..+ -... .-..+++..+ ++.+..-.++.+.+||..+.+.+.++..
T Consensus 57 tqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp EEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTEEEEEEEC
T ss_pred cceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCcEEEEEeC
Confidence 35677776666778888899999999999988777 2222 1234555433 4444455689999999999999888764
Q ss_pred ccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccC--
Q psy12697 445 HNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS-- 522 (602)
Q Consensus 445 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-- 522 (602)
.... ..+++|++.|+.+..++.|.++|.++.+.+..+....
T Consensus 135 ~~eG-------------------------------------wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g 177 (268)
T 3nok_A 135 SGEG-------------------------------------WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRG 177 (268)
T ss_dssp SSCC-------------------------------------CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETT
T ss_pred CCce-------------------------------------eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCC
Confidence 2110 1222467777777779999999999999887776422
Q ss_pred C---CeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEE--EEecCCcEEEEEECCCCCeEEEecc
Q psy12697 523 A---PALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVH--SYKGTGGIFEVCWNSRGDKVGASAS 594 (602)
Q Consensus 523 ~---~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~l~~spdg~~l~~~~~ 594 (602)
. .++.+.|. +| .++..-.++.|.+.|..+++.+..+....-..... ......-.+.|||+|+++.|++++.
T Consensus 178 ~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 178 QPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred cccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 1 34567777 66 45555568899999999999888876431100000 0112245789999999888887765
No 255
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.93 E-value=2.3e-07 Score=81.53 Aligned_cols=189 Identities=9% Similarity=0.076 Sum_probs=126.6
Q ss_pred eeeeeccCCCeEEEeeCCC--eEEEEEcCCCceeeEeccCCCC-eEEEEECCCCCEEEEE-ECCCeEEEEeCCCCeeeEe
Q psy12697 366 ALDVDWQSNTSFASCSTDQ--HIHVCKLHSDKPVKSFEGHTNE-VNAIKWDPQGLLLASC-SDDMTLKIWSLDKDNCVHD 441 (602)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~ 441 (602)
...+.|+.+..+.+.+.+| .|+.+|+.+++.+..+...... -..+++ +++.|... -.++.+.+||..+.+.+.+
T Consensus 45 tqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 3567777544455666655 8999999999988887643322 123444 34455444 4588999999999998888
Q ss_pred eccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccc
Q psy12697 442 LQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH 521 (602)
Q Consensus 442 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 521 (602)
+..... ...+++|++.|+.+..++.|.++|..+.+.+..+...
T Consensus 123 i~~~~e-------------------------------------G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~ 165 (262)
T 3nol_A 123 FNYDGE-------------------------------------GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVT 165 (262)
T ss_dssp EECSSC-------------------------------------CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECE
T ss_pred EECCCC-------------------------------------ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEec
Confidence 764211 1123346677777766888999999999988776642
Q ss_pred C-----CCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEE-EEecCCcEEEEEECCCCCeEEEecc
Q psy12697 522 S-----APALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVH-SYKGTGGIFEVCWNSRGDKVGASAS 594 (602)
Q Consensus 522 ~-----~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~l~~spdg~~l~~~~~ 594 (602)
. ..++.+.|. +| .++..-.++.|.+.|..+++.+..+....-..... ..........|||+|+++.|++++.
T Consensus 166 ~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 166 AHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 2 224457776 67 55555568899999999999888876431110000 0111245789999999999888876
No 256
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.91 E-value=7.1e-05 Score=76.54 Aligned_cols=413 Identities=10% Similarity=-0.004 Sum_probs=206.1
Q ss_pred ccceeeeecccce-eeeeeeccCCceEEEEECCCCCeEEEee-CCceEEEEecCCcee-EEEeec-cCceEEEEeCCCCC
Q psy12697 119 RLTLPLWDVERGE-CLNTLTRHTEPVYSVAFSPDGKFLASGS-FDKCVHIWSARTGQL-VHSYKG-TGGIFEVCWNSRGT 194 (602)
Q Consensus 119 ~~~i~vwd~~~~~-~~~~l~~h~~~V~~~~~s~d~~~l~s~~-~d~~v~iwd~~~~~~-~~~~~~-~~~~~~~~~~~~~~ 194 (602)
+..|+..|+.... ....+...-..+..++|++.+..|.-+. ..+.|..+++..... ...+.. ......+++...+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC
Confidence 4567777776543 2222333445678999999666665544 568899898876532 222222 24567777776444
Q ss_pred CCCCCC-CccccccccccCCcceEee-CCCcceEEEEEcCCCCEEEEeeC--CCcEEEEeCCCCCCCCCccceEEEEEEe
Q psy12697 195 PPNPPE-SMEVDASIEIPQSKATKLI-GHESEVFICAWNPVKDFLASGSG--DSTARIWDMTDSTKKDPKELQIVLRHCI 270 (602)
Q Consensus 195 ~~~~~~-~~~~~~~~~~~~~~~~~l~-~h~~~v~~~~~~~~~~~l~s~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 270 (602)
.+.... .................+. ..-.....+++.|.+..|+.+.. .+.|...+++..... ....
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~------~l~~--- 167 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF------IIIN--- 167 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE------EEEC---
T ss_pred EEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE------EEEe---
Confidence 332222 1122222233333333333 34455778899987666655543 345555555432211 0000
Q ss_pred cCCCcccCCCCceeEEeeCCCCCeEEEE-eCCCeEEEEcCCCcceeeccc-ccCCeEEEEEccCCCEEEEE-ecCCcEEE
Q psy12697 271 SKGGTEVPSNKDVTSLDWNNNGSFLATG-SYDGYARIWTSDGSLKSTLGQ-HKGPIFALKWNKRGNYILSA-GVDKTTII 347 (602)
Q Consensus 271 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~-~~dg~i~~ 347 (602)
..-.....+++++++..|..+ ...+.|..++.+|.....+.. .......+++..+ .|+.+ ...+.|..
T Consensus 168 -------~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~ 238 (619)
T 3s94_A 168 -------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILA 238 (619)
T ss_dssp -------SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEE
T ss_pred -------CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEE
Confidence 012456889999876666555 445789999988765544322 1222346666654 45444 45677888
Q ss_pred EeCCCCceeEEeeecc-------------CC------------e--eee-----------ec-----cCC--------Ce
Q psy12697 348 WDAASGQCEQQFSFHS-------------AP------------A--LDV-----------DW-----QSN--------TS 376 (602)
Q Consensus 348 wd~~~~~~~~~~~~~~-------------~~------------~--~~~-----------~~-----~~~--------~~ 376 (602)
.|..+++....+.... .+ . .|+ +. .++ ..
T Consensus 239 ~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~ 318 (619)
T 3s94_A 239 CNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATE 318 (619)
T ss_dssp EESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSE
T ss_pred EECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCce
Confidence 8877665433221100 00 0 000 00 001 11
Q ss_pred EEEeeCCCeEEEEEcCCCceee-Eec-cCCCCeEEEEECCCCCEEEEEE-CCCeEEEEeCCCCeeeEeeccccccEEEEE
Q psy12697 377 FASCSTDQHIHVCKLHSDKPVK-SFE-GHTNEVNAIKWDPQGLLLASCS-DDMTLKIWSLDKDNCVHDLQAHNKEIYTIK 453 (602)
Q Consensus 377 ~~~~~~~~~i~i~d~~~~~~~~-~~~-~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~ 453 (602)
++..+..+.|+..++....... .+. ..-..+..++|++.+..|+.+. ..+.|+.+++........+..
T Consensus 319 ~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~--------- 389 (619)
T 3s94_A 319 LLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTA--------- 389 (619)
T ss_dssp EEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS---------
T ss_pred EEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEEC---------
Confidence 3333344556666665443211 111 1123467888888555555444 466777777654321111110
Q ss_pred ECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecC
Q psy12697 454 WSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKR-GNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQS 532 (602)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~ 532 (602)
.-.....+++.+. +++.++-...+.|.+.++........+...-.....+++.|
T Consensus 390 -------------------------~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp 444 (619)
T 3s94_A 390 -------------------------QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDP 444 (619)
T ss_dssp -------------------------SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEET
T ss_pred -------------------------CCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEc
Confidence 1123456777764 44555555678899999875433222222334678999998
Q ss_pred C-ceEEEeeC--CCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEecc
Q psy12697 533 N-TSFASCST--DQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASAS 594 (602)
Q Consensus 533 ~-~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~ 594 (602)
. |.|..+.. ...|...+++..... .+-.. .-.....|+++++++.|..+..
T Consensus 445 ~~G~ly~tD~g~~~~I~r~~~dG~~~~-~l~~~----------~l~~P~GlalD~~~~~LY~aD~ 498 (619)
T 3s94_A 445 MVGYMYWTDWGEIPKIERAALDGSDRV-VLVNT----------SLGWPNGLALDYDEGKIYWGDA 498 (619)
T ss_dssp TTTEEEEEECSSSCEEEEEETTSCSCE-EEECS----------SCSCEEEEEEETTTTEEEEEET
T ss_pred CCCcEEEecCCCCCEEEEEccCCCccE-EEEeC----------CCCCCeeeEEcccCCEEEEEEC
Confidence 6 55544432 356666665432211 11100 1134567778877666666544
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.91 E-value=4e-07 Score=92.47 Aligned_cols=302 Identities=11% Similarity=0.055 Sum_probs=167.9
Q ss_pred CCeEEEeeC-CceEEEEec-CCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEE
Q psy12697 152 GKFLASGSF-DKCVHIWSA-RTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICA 229 (602)
Q Consensus 152 ~~~l~s~~~-d~~v~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~ 229 (602)
+..+..++. ++.|.-+|. .+|+.+-++....... . ..... .. ...... +
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~------------------~---~~~~~---~~-~~~~~~----~ 112 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDAS------------------T---KAVMC---CD-VVDRGL----A 112 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGG------------------G---GGGCT---TC-SCCCCC----E
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCcc------------------c---ccccc---cc-cccccc----E
Confidence 455666666 899999999 9999887654321000 0 00000 00 000011 1
Q ss_pred EcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC--CCCeEEEEeC------C
Q psy12697 230 WNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN--NGSFLATGSY------D 301 (602)
Q Consensus 230 ~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~------d 301 (602)
. .+..++.++.|+.+..+|..+++........ .... ...+. -+| .+..+++++. +
T Consensus 113 ~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~----------~~~~--~~~~~---~~P~v~~g~v~vg~~~~~~~~~ 175 (571)
T 2ad6_A 113 Y--GAGQIVKKQANGHLLALDAKTGKINWEVEVC----------DPKV--GSTLT---QAPFVAKDTVLMGCSGAELGVR 175 (571)
T ss_dssp E--ETTEEEEECTTSEEEEEETTTCCEEEEEECC----------CGGG--TCBCC---SCCEEETTEEEEECBCGGGTCC
T ss_pred E--ECCEEEEEeCCCEEEEEECCCCCEEEEecCC----------CCCc--cceec---cCCEEECCEEEEEecCCccCCC
Confidence 1 2557778888999999999888754221110 0000 00111 111 1335555554 7
Q ss_pred CeEEEEcCC-CcceeecccccC--------------------------------------CeEEEEEccCCCEEEEEecC
Q psy12697 302 GYARIWTSD-GSLKSTLGQHKG--------------------------------------PIFALKWNKRGNYILSAGVD 342 (602)
Q Consensus 302 g~i~i~~~~-~~~~~~~~~~~~--------------------------------------~i~~~~~~~~~~~l~~~~~d 342 (602)
|.|..+|.. |+.+-.+..... ....+++.++...++.++.+
T Consensus 176 g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~ 255 (571)
T 2ad6_A 176 GAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGN 255 (571)
T ss_dssp CEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCC
T ss_pred CEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCC
Confidence 899999975 555443321110 00135566666677666532
Q ss_pred ----------------CcEEEEeCCCCceeEEeeeccCC------eee---eeccCCC----eEEEeeCCCeEEEEEcCC
Q psy12697 343 ----------------KTTIIWDAASGQCEQQFSFHSAP------ALD---VDWQSNT----SFASCSTDQHIHVCKLHS 393 (602)
Q Consensus 343 ----------------g~i~~wd~~~~~~~~~~~~~~~~------~~~---~~~~~~~----~~~~~~~~~~i~i~d~~~ 393 (602)
+.|..+|..+++.+..++..... ... +....++ .++.++.+|.++++|..+
T Consensus 256 ~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 335 (571)
T 2ad6_A 256 PAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNREN 335 (571)
T ss_dssp CSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTT
T ss_pred CccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCC
Confidence 35999999999998877643211 111 1111234 366788899999999999
Q ss_pred CceeeEeccCC-------------CCe--------------------------EEEEECCCCCEEEEEECC---------
Q psy12697 394 DKPVKSFEGHT-------------NEV--------------------------NAIKWDPQGLLLASCSDD--------- 425 (602)
Q Consensus 394 ~~~~~~~~~~~-------------~~i--------------------------~~~~~~~~~~~l~~~~~d--------- 425 (602)
++.+....... .++ ..++++|+..++++...+
T Consensus 336 G~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~ 415 (571)
T 2ad6_A 336 GNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFM 415 (571)
T ss_dssp CCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECC
T ss_pred CCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccc
Confidence 98876554221 111 246788888888777644
Q ss_pred ----------------------------CeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccC
Q psy12697 426 ----------------------------MTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLG 477 (602)
Q Consensus 426 ----------------------------g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (602)
|.|..||+.+++.+.++...
T Consensus 416 ~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-------------------------------- 463 (571)
T 2ad6_A 416 LPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-------------------------------- 463 (571)
T ss_dssp CCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES--------------------------------
T ss_pred cccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC--------------------------------
Confidence 34444444444443333211
Q ss_pred CccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCC-eeEeeecCCc
Q psy12697 478 QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP-ALDVDWQSNT 534 (602)
Q Consensus 478 ~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-v~~~~~s~~~ 534 (602)
..+....+...+..++.++.||.|+.||.++|+.+..+...... -.-+.+..+|
T Consensus 464 ---~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G 518 (571)
T 2ad6_A 464 ---FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKG 518 (571)
T ss_dssp ---SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred ---CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECC
Confidence 11111112224567777899999999999999999888754322 1223355677
No 258
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.90 E-value=3.2e-07 Score=80.55 Aligned_cols=183 Identities=12% Similarity=-0.019 Sum_probs=131.1
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCC-eeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEec
Q psy12697 323 PIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP-ALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE 401 (602)
Q Consensus 323 ~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~ 401 (602)
....+.|+ ++....+.+.+|.|+.+|+.+++.+..+ ..... ...++...+..+.+.-.++.+.+||..+.+.+.++.
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 34788887 3566677788899999999999999888 44332 233666667777777789999999999999998887
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccC
Q psy12697 402 GHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKG 481 (602)
Q Consensus 402 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (602)
.... -..++ ++++.|+.+..++.|.++|..+.+.+.++...... ..-.
T Consensus 134 ~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g-----------------------------~~v~ 181 (268)
T 3nok_A 134 YSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRG-----------------------------QPVE 181 (268)
T ss_dssp CSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETT-----------------------------EECC
T ss_pred CCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCC-----------------------------cccc
Confidence 5322 23333 56888888877899999999998887776532110 0112
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccc-------------CCCeeEeeecCCc-eEEEee
Q psy12697 482 PIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH-------------SAPALDVDWQSNT-SFASCS 540 (602)
Q Consensus 482 ~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------~~~v~~~~~s~~~-~l~~~~ 540 (602)
.++.+.|. +|+..+....+..|.+.|.++++.+..+... .+-.+.|+++|++ .|++.+
T Consensus 182 ~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 182 LINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 33455555 6766666667889999999999988776632 1356889999988 555544
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.89 E-value=1.2e-06 Score=82.54 Aligned_cols=233 Identities=8% Similarity=0.033 Sum_probs=147.0
Q ss_pred ceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeeccc--------------------ccCCeEEEEEcc-CCCEEEEEe
Q psy12697 282 DVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQ--------------------HKGPIFALKWNK-RGNYILSAG 340 (602)
Q Consensus 282 ~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~--------------------~~~~i~~~~~~~-~~~~l~~~~ 340 (602)
...+++|.+++++++++..++.|..|+..+.....+.. ....+..+++.+ ++ .|+.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEEE
Confidence 45778899999888888899999999987644433211 123578899997 55 455565
Q ss_pred cCCcEEEEeCCCCceeEEeee----ccCCeeeeeccC-CCeEEEeeC------------------CCeEEEEEcCCCcee
Q psy12697 341 VDKTTIIWDAASGQCEQQFSF----HSAPALDVDWQS-NTSFASCST------------------DQHIHVCKLHSDKPV 397 (602)
Q Consensus 341 ~dg~i~~wd~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~------------------~~~i~i~d~~~~~~~ 397 (602)
..+.+..+|..+++....... .......+++.+ ++.+.++.. ++.|..+|..+++..
T Consensus 99 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 556688888776543221111 112456788888 777666543 267888888766543
Q ss_pred eEeccCCCCeEEEEECCCCCEEEEE-ECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeecc
Q psy12697 398 KSFEGHTNEVNAIKWDPQGLLLASC-SDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTL 476 (602)
Q Consensus 398 ~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (602)
.... .......++++|+++.|..+ +.++.|.+|++..... .....+. ..
T Consensus 179 ~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~--------~~~~~~~---------------------~~ 228 (322)
T 2fp8_A 179 LLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK--------GTAEVLV---------------------KI 228 (322)
T ss_dssp EEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT--------TCEEEEE---------------------EC
T ss_pred Eecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC--------CccceEE---------------------eC
Confidence 2222 22345679999999876665 4568899999874210 0000000 00
Q ss_pred CCccCCeEEEEEccCCCEEEEEeC----------CCeEEEEeCCCCceeeeecccC----CCeeEeeecCCc-eEEEeeC
Q psy12697 477 GQHKGPIFALKWNKRGNYILSAGV----------DKTTIIWDAASGQCEQQFSFHS----APALDVDWQSNT-SFASCST 541 (602)
Q Consensus 477 ~~~~~~v~~i~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~----~~v~~~~~s~~~-~l~~~~~ 541 (602)
.+ ...++++++|++.++... .+.|..+|.. ++.+..+.... ..++.+++ .++ .+++...
T Consensus 229 ---~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~ 302 (322)
T 2fp8_A 229 ---PN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLF 302 (322)
T ss_dssp ---SS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSS
T ss_pred ---CC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecC
Confidence 11 456788888887776654 4678899874 77776665432 34666666 356 5556567
Q ss_pred CCcEEEeecC
Q psy12697 542 DQHIHVCKLH 551 (602)
Q Consensus 542 d~~i~iw~~~ 551 (602)
.+.|.++++.
T Consensus 303 ~~~i~~~~~~ 312 (322)
T 2fp8_A 303 HGSVGILVYD 312 (322)
T ss_dssp CSEEEEEEC-
T ss_pred CCceEEEecc
Confidence 7889988864
No 260
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.88 E-value=1.6e-06 Score=88.22 Aligned_cols=156 Identities=17% Similarity=0.208 Sum_probs=95.4
Q ss_pred CcEEEEeCCCCceeEEeeeccC----------Ceeeeecc-CCC----eEEEeeCCCeEEEEEcCCCceeeEeccCCC--
Q psy12697 343 KTTIIWDAASGQCEQQFSFHSA----------PALDVDWQ-SNT----SFASCSTDQHIHVCKLHSDKPVKSFEGHTN-- 405 (602)
Q Consensus 343 g~i~~wd~~~~~~~~~~~~~~~----------~~~~~~~~-~~~----~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~-- 405 (602)
+.|..+|..+|+.+..++.... ++. +... .++ .++.++.+|.++++|..+++.+..+.....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 5899999999999988764221 111 1111 233 577788999999999999988765543210
Q ss_pred -----------C--------------------------------eEEEEECCCCCEEEEEEC------------------
Q psy12697 406 -----------E--------------------------------VNAIKWDPQGLLLASCSD------------------ 424 (602)
Q Consensus 406 -----------~--------------------------------i~~~~~~~~~~~l~~~~~------------------ 424 (602)
+ -..++++|+..++++...
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 0 013566776666665543
Q ss_pred ---------------CCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEc
Q psy12697 425 ---------------DMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWN 489 (602)
Q Consensus 425 ---------------dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s 489 (602)
+|.|.-||+.+++.+.+.... .++..-...
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~-----------------------------------~~~~~g~~~ 494 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH-----------------------------------LPLWAGVLA 494 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES-----------------------------------SCCCSCCEE
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCC-----------------------------------CCCcccceE
Confidence 344555555555444333211 011111111
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCe-eEeeecCCc
Q psy12697 490 KRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA-LDVDWQSNT 534 (602)
Q Consensus 490 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v-~~~~~s~~~ 534 (602)
..+.+++.++.||.++.||.++|+.+..++...... .-+.+..+|
T Consensus 495 tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G 540 (582)
T 1flg_A 495 TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDG 540 (582)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred eCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECC
Confidence 245678889999999999999999998887643322 125566777
No 261
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.84 E-value=9.9e-07 Score=76.85 Aligned_cols=190 Identities=8% Similarity=0.007 Sum_probs=126.6
Q ss_pred eeeeeccCCCeEEEeeCC--CeEEEEEcCCCceeeEeccCCCC-eEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEee
Q psy12697 366 ALDVDWQSNTSFASCSTD--QHIHVCKLHSDKPVKSFEGHTNE-VNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDL 442 (602)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~--~~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 442 (602)
...+.|.++..+.+.+.+ +.|+.+|+.+++.+......... -..+++.. +++....-.++.+.+||..+.+.+.++
T Consensus 23 tqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATLTPRARF 101 (243)
T ss_dssp EEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred cccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcCcEEEEE
Confidence 456778775556666664 48999999999988877644332 12344432 334444556899999999999998887
Q ss_pred ccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccC
Q psy12697 443 QAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS 522 (602)
Q Consensus 443 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 522 (602)
...... ..++++++.|+.+..++.|.++|..+.+.+..+....
T Consensus 102 ~~~~~G-------------------------------------wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~ 144 (243)
T 3mbr_X 102 RYPGEG-------------------------------------WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA 144 (243)
T ss_dssp ECSSCC-------------------------------------CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred eCCCCc-------------------------------------eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc
Confidence 643211 1222456666666678999999999999887776432
Q ss_pred -----CCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceEEE--EecCCcEEEEEECCCCCeEEEecc
Q psy12697 523 -----APALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHS--YKGTGGIFEVCWNSRGDKVGASAS 594 (602)
Q Consensus 523 -----~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~l~~spdg~~l~~~~~ 594 (602)
..++.+.|. +| .++..-.+..|.+.|..+++.+..+....-...... .....-.+.+||+|+++.|++++.
T Consensus 145 ~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 145 GGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 234556665 56 445554678999999999998888764321000000 011245789999999988888775
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.81 E-value=1.4e-05 Score=74.34 Aligned_cols=225 Identities=13% Similarity=0.123 Sum_probs=138.0
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecC--CcEEEEeCCCCceeEE
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVD--KTTIIWDAASGQCEQQ 358 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--g~i~~wd~~~~~~~~~ 358 (602)
.....++|+++++++++-..++.|..|+.++....... .......+++.++++.+++.... ..|..+|..+++....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 45678999999987777668899999998876544332 33568899999999965554332 2477778777775433
Q ss_pred eeecc-CCeeeeeccCCCeEEEee-CCCeEEEEEcCCCce-eeEe---------ccCCCCeEEEEECCCCCEEEEEE-CC
Q psy12697 359 FSFHS-APALDVDWQSNTSFASCS-TDQHIHVCKLHSDKP-VKSF---------EGHTNEVNAIKWDPQGLLLASCS-DD 425 (602)
Q Consensus 359 ~~~~~-~~~~~~~~~~~~~~~~~~-~~~~i~i~d~~~~~~-~~~~---------~~~~~~i~~~~~~~~~~~l~~~~-~d 425 (602)
..... .....++..+++.+++.. .++.|+.+|..+++. +... .........+ +|+++.|+.+. ..
T Consensus 111 ~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~ 188 (306)
T 2p4o_A 111 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEK 188 (306)
T ss_dssp EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTT
T ss_pred EeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCC
Confidence 32211 112233334455544444 588999999876421 1110 0111234555 78887665554 56
Q ss_pred CeEEEEeCCC-CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeE
Q psy12697 426 MTLKIWSLDK-DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTT 504 (602)
Q Consensus 426 g~i~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i 504 (602)
+.|..|++.. ++. .. ..+ +. .......++++++|+++++....+.|
T Consensus 189 ~~I~~~~~~~~g~~-~~-----~~~--~~-------------------------~~~~P~gi~vd~dG~l~va~~~~~~V 235 (306)
T 2p4o_A 189 MLLLRIPVDSTDKP-GE-----PEI--FV-------------------------EQTNIDDFAFDVEGNLYGATHIYNSV 235 (306)
T ss_dssp TEEEEEEBCTTSCB-CC-----CEE--EE-------------------------ESCCCSSEEEBTTCCEEEECBTTCCE
T ss_pred CEEEEEEeCCCCCC-Cc-----cEE--Ee-------------------------ccCCCCCeEECCCCCEEEEeCCCCeE
Confidence 7899999864 221 00 000 00 00123458889999888877778899
Q ss_pred EEEeCCCCceee--eecccCCCeeEeeec---CCc-eEEEeeCC
Q psy12697 505 IIWDAASGQCEQ--QFSFHSAPALDVDWQ---SNT-SFASCSTD 542 (602)
Q Consensus 505 ~iwd~~~~~~~~--~~~~~~~~v~~~~~s---~~~-~l~~~~~d 542 (602)
.++|.. ++... .+.......++++|. |++ .|++++..
T Consensus 236 ~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 236 VRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 999975 66532 343333568899998 886 55554443
No 263
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.80 E-value=2.4e-06 Score=74.44 Aligned_cols=186 Identities=12% Similarity=0.079 Sum_probs=128.7
Q ss_pred CCeEEEEEccCCCEEEEEecC--CcEEEEeCCCCceeEEeeeccCCe-eeeeccCCCeEEEeeCCCeEEEEEcCCCceee
Q psy12697 322 GPIFALKWNKRGNYILSAGVD--KTTIIWDAASGQCEQQFSFHSAPA-LDVDWQSNTSFASCSTDQHIHVCKLHSDKPVK 398 (602)
Q Consensus 322 ~~i~~~~~~~~~~~l~~~~~d--g~i~~wd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~ 398 (602)
.....+.|++ +....+.+.+ ..|+.+|+.+++.+.......... ..++...+..+...-.++.+.+||..+.+.+.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRA 99 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEE
Confidence 3467899986 5555566664 489999999999999887654432 33455555666666778999999999999998
Q ss_pred EeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCC
Q psy12697 399 SFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQ 478 (602)
Q Consensus 399 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (602)
++...... ..++ ++++.|+.+..++.|.++|..+.+.+.++.......
T Consensus 100 ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~----------------------------- 147 (243)
T 3mbr_X 100 RFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGR----------------------------- 147 (243)
T ss_dssp EEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTE-----------------------------
T ss_pred EEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCc-----------------------------
Confidence 88754322 3444 567777777778999999999988777765321100
Q ss_pred ccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeeccc-------------CCCeeEeeecCCc-eEEEeeC
Q psy12697 479 HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH-------------SAPALDVDWQSNT-SFASCST 541 (602)
Q Consensus 479 ~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------~~~v~~~~~s~~~-~l~~~~~ 541 (602)
.-..++.+.+. +|+..+..-.+..|.+.|..+|+.+..+... .+-.+.++++|++ .|++.+.
T Consensus 148 ~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 148 PLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp ECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred ccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 01223344444 6666666656789999999999988776532 1246889999988 5555543
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.80 E-value=2.3e-06 Score=80.56 Aligned_cols=259 Identities=10% Similarity=0.012 Sum_probs=146.3
Q ss_pred CceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeC
Q psy12697 141 EPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIG 220 (602)
Q Consensus 141 ~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 220 (602)
....+++++++|+++.++..++.|..||..+++.. .+........ .-..++.. ......
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~-~~~~~g~~-------------------~~~~~~ 77 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWN-KAFCENST-------------------DAEKRP 77 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCC-HHHHTTCC-------------------CGGGHH
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEeccccccc-cccccccc-------------------chhccc
Confidence 34567889999998888888999999998765432 1210000000 00000000 000000
Q ss_pred CCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC-CCCeEEEEe
Q psy12697 221 HESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN-NGSFLATGS 299 (602)
Q Consensus 221 h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~ 299 (602)
....+..+++.+++..|+.+...+.|..+|..++... ..... ..+ ........+++.+ +|++.++-.
T Consensus 78 ~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~------~~~~~---~~~---~~~~~p~~i~~d~~~G~l~v~d~ 145 (322)
T 2fp8_A 78 LCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHAT------QLATS---VDG---VPFKWLYAVTVDQRTGIVYFTDV 145 (322)
T ss_dssp HHCCEEEEEEETTTTEEEEEETTTEEEEECTTCEECE------EEESE---ETT---EECSCEEEEEECTTTCCEEEEES
T ss_pred cCCCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEE------Eeccc---CCC---CcccccceEEEecCCCEEEEECC
Confidence 1234778999983334555544455777776543211 00000 000 0113467899999 897666543
Q ss_pred C-----------------CCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEE-ecCCcEEEEeCCCCc--eeEEe
Q psy12697 300 Y-----------------DGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAASGQ--CEQQF 359 (602)
Q Consensus 300 ~-----------------dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~--~~~~~ 359 (602)
. +|.|..|+..+.....+.........++++|+++.|+.+ +..+.|..+++.... ....+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~ 225 (322)
T 2fp8_A 146 STLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVL 225 (322)
T ss_dssp CSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEE
T ss_pred cccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceE
Confidence 2 367888887644433332223345679999999876655 556889999987531 11112
Q ss_pred eeccCCeeeeeccCCCeEEEeeC-----------CCeEEEEEcCCCceeeEeccCC----CCeEEEEECCCCCEEEEEEC
Q psy12697 360 SFHSAPALDVDWQSNTSFASCST-----------DQHIHVCKLHSDKPVKSFEGHT----NEVNAIKWDPQGLLLASCSD 424 (602)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~i~i~d~~~~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~ 424 (602)
..... ...++..+++.+.++.. .+.|..+|.. ++.+..+.... ..++.+++ .+++++++...
T Consensus 226 ~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~ 302 (322)
T 2fp8_A 226 VKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLF 302 (322)
T ss_dssp EECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSS
T ss_pred EeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecC
Confidence 11222 66778888776666553 3568888864 66666665432 34666766 35666666566
Q ss_pred CCeEEEEeCCC
Q psy12697 425 DMTLKIWSLDK 435 (602)
Q Consensus 425 dg~i~iwd~~~ 435 (602)
++.|..+++..
T Consensus 303 ~~~i~~~~~~~ 313 (322)
T 2fp8_A 303 HGSVGILVYDK 313 (322)
T ss_dssp CSEEEEEEC--
T ss_pred CCceEEEeccc
Confidence 78899998764
No 265
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.76 E-value=1.9e-06 Score=87.33 Aligned_cols=202 Identities=10% Similarity=0.037 Sum_probs=122.7
Q ss_pred CeEEEEeC-CCeEEEEcC--CCcceeecccccC-----------CeEEEEEccCCCE----EEEEecCCcEEEEeCCCCc
Q psy12697 293 SFLATGSY-DGYARIWTS--DGSLKSTLGQHKG-----------PIFALKWNKRGNY----ILSAGVDKTTIIWDAASGQ 354 (602)
Q Consensus 293 ~~l~~~~~-dg~i~i~~~--~~~~~~~~~~~~~-----------~i~~~~~~~~~~~----l~~~~~dg~i~~wd~~~~~ 354 (602)
..+++++. ++.|.-+|. .|+.+-....... ....+.++|.+.. ++.++.|+.+..+|..+|+
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCC
Confidence 35555555 677777776 3554443322111 0123455443444 8888899999999999999
Q ss_pred eeEEeeeccC----CeeeeeccCCCeEEEeeC------CCeEEEEEcCCCceeeEeccCCCC------------------
Q psy12697 355 CEQQFSFHSA----PALDVDWQSNTSFASCST------DQHIHVCKLHSDKPVKSFEGHTNE------------------ 406 (602)
Q Consensus 355 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~------~~~i~i~d~~~~~~~~~~~~~~~~------------------ 406 (602)
.+........ .+...-...++.+++++. ++.|+.+|..+++.+-++......
T Consensus 143 ~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~ 222 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQ 222 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccc
Confidence 9887654321 111111112466776663 799999999999987665532211
Q ss_pred --------------------eEEEEECCCCCEEEEEECC----------------CeEEEEeCCCCeeeEeeccccccEE
Q psy12697 407 --------------------VNAIKWDPQGLLLASCSDD----------------MTLKIWSLDKDNCVHDLQAHNKEIY 450 (602)
Q Consensus 407 --------------------i~~~~~~~~~~~l~~~~~d----------------g~i~iwd~~~~~~~~~~~~~~~~i~ 450 (602)
-..++++++..+++.+..+ +.|..+|.++++.+..++.......
T Consensus 223 ~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~w 302 (599)
T 1w6s_A 223 KGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEW 302 (599)
T ss_dssp TTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccc
Confidence 0135677777788877765 3788899998888777654321110
Q ss_pred EEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEc-cCC---CEEEEEeCCCeEEEEeCCCCceeeeec
Q psy12697 451 TIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWN-KRG---NYILSAGVDKTTIIWDAASGQCEQQFS 519 (602)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s-~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~ 519 (602)
. +.....++. +... .+| +.++.++.+|.++++|.++|+.+....
T Consensus 303 d------------------------~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 303 D------------------------YAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp C------------------------CCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred c------------------------ccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 0 000111111 1221 456 467778899999999999999886544
No 266
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.70 E-value=3.9e-06 Score=87.34 Aligned_cols=271 Identities=13% Similarity=0.043 Sum_probs=148.2
Q ss_pred EEEEcC-CCCEEEEeeCCC-----------cEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 227 ICAWNP-VKDFLASGSGDS-----------TARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 227 ~~~~~~-~~~~l~s~~~dg-----------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
.+++.+ +++.++.|+.+. .+.+||..+++........ .++.....++++..++++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~-------------~~~~~~~~~~~~~~~g~l 256 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV-------------TKHDMFCPGISMDGNGQI 256 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE-------------CSCCCSSCEEEECTTSCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC-------------CCCCCccccccCCCCCCE
Confidence 556777 788888877543 5788998877543211100 111223445778889999
Q ss_pred EEEEeC-CCeEEEEcCCCcceeeccc-c-cCCeEEEEEccCCCEEEEEe-cC-----CcEEEEeCCCCceeEEe-----e
Q psy12697 295 LATGSY-DGYARIWTSDGSLKSTLGQ-H-KGPIFALKWNKRGNYILSAG-VD-----KTTIIWDAASGQCEQQF-----S 360 (602)
Q Consensus 295 l~~~~~-dg~i~i~~~~~~~~~~~~~-~-~~~i~~~~~~~~~~~l~~~~-~d-----g~i~~wd~~~~~~~~~~-----~ 360 (602)
+++|+. ++.+.+||.....-..+.. + ...-.+++..++++.++.|+ .+ ..+.+||..+.+....- .
T Consensus 257 yv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p 336 (656)
T 1k3i_A 257 VVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNP 336 (656)
T ss_dssp EEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGG
T ss_pred EEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccc
Confidence 999985 4589999976433322221 1 11123455667899888888 34 57899999887644321 0
Q ss_pred eccCCeeeeeccCCCeEEEeeCC---------CeEEEEEcCCCceeeEeccCC---------CCeEEEEECC-CCCEEEE
Q psy12697 361 FHSAPALDVDWQSNTSFASCSTD---------QHIHVCKLHSDKPVKSFEGHT---------NEVNAIKWDP-QGLLLAS 421 (602)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~---------~~i~i~d~~~~~~~~~~~~~~---------~~i~~~~~~~-~~~~l~~ 421 (602)
.....-..+....+..++.++.+ ..+..||..+.........+. ..-.++.|.. ++++++.
T Consensus 337 ~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~ 416 (656)
T 1k3i_A 337 MLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTF 416 (656)
T ss_dssp GCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEE
T ss_pred cccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEE
Confidence 01110011111233445555444 456788887765333222111 1223444443 7788888
Q ss_pred EECCC-----------eEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEcc
Q psy12697 422 CSDDM-----------TLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNK 490 (602)
Q Consensus 422 ~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~ 490 (602)
|+.++ .|.+||..+..-...... .+. ....-.+++..|
T Consensus 417 GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~------------------------------~mp-~~R~~~~~~~l~ 465 (656)
T 1k3i_A 417 GGSPDYQDSDATTNAHIITLGEPGTSPNTVFASN------------------------------GLY-FARTFHTSVVLP 465 (656)
T ss_dssp CCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTT------------------------------CCS-SCCBSCEEEECT
T ss_pred eCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccC------------------------------CCC-CCcccCCeEECC
Confidence 87542 466666654332211100 000 011112345667
Q ss_pred CCCEEEEEeCC-----------CeEEEEeCCCCceeee--ecccCCCeeEeeecCCc-eEEEeeC
Q psy12697 491 RGNYILSAGVD-----------KTTIIWDAASGQCEQQ--FSFHSAPALDVDWQSNT-SFASCST 541 (602)
Q Consensus 491 ~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~s~~~-~l~~~~~ 541 (602)
+|++++.|+.+ ..+.+||..+.+-... +...........+.||+ .++.|+.
T Consensus 466 ~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 466 DGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 99999999865 4689999887653321 21112223345567899 7777764
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.66 E-value=9.6e-05 Score=69.99 Aligned_cols=242 Identities=10% Similarity=-0.003 Sum_probs=144.7
Q ss_pred eeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEe-cCCcEEEEeCCCCceeEEeee
Q psy12697 283 VTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAASGQCEQQFSF 361 (602)
Q Consensus 283 i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~ 361 (602)
.+|.+..++. +|+.+. ...|+..++++.....+......+..++|++....|+.+. ..+.|..+++...........
T Consensus 36 ~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 113 (349)
T 3v64_C 36 RSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 113 (349)
T ss_dssp SCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred CcccccccCc-eeEeec-ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC
Confidence 4555555533 444433 3558888888765555444455688999998766666554 567898999876654433332
Q ss_pred ccCCeeeeecc--CCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEE-CC-CeEEEEeCCCCe
Q psy12697 362 HSAPALDVDWQ--SNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCS-DD-MTLKIWSLDKDN 437 (602)
Q Consensus 362 ~~~~~~~~~~~--~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~ 437 (602)
.......+++. .+..+++-...+.|.+.++........+.........++++|.+..|+... .. +.|..++++...
T Consensus 114 ~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~ 193 (349)
T 3v64_C 114 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 193 (349)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC
Confidence 22334445554 344455666678899999876554444444445688999999666555544 33 677777765322
Q ss_pred eeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE-eCCCeEEEEeCCCCceee
Q psy12697 438 CVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAASGQCEQ 516 (602)
Q Consensus 438 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~ 516 (602)
...+.. ..-.....++++|++..|..+ ...+.|..+|+.......
T Consensus 194 -~~~~~~---------------------------------~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~ 239 (349)
T 3v64_C 194 -RRIIAD---------------------------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKA 239 (349)
T ss_dssp -CEESCC---------------------------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred -cEEEEE---------------------------------CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEE
Confidence 111110 012345678888766655554 456789999987543333
Q ss_pred eecccCCCeeEeeecCCceEEEeeCCCcEEEeecCCCCceeeee
Q psy12697 517 QFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE 560 (602)
Q Consensus 517 ~~~~~~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 560 (602)
.+.........+++..+..+++-...+.|..++..+++.+..+.
T Consensus 240 ~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 240 VISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 33333344567777433355555667788888866665554443
No 268
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.62 E-value=0.00081 Score=68.85 Aligned_cols=418 Identities=11% Similarity=0.007 Sum_probs=211.2
Q ss_pred ccceeeeecccceeeeeee-ccCCceEEEEECCCCCeEE-EeeCCceEEEEecCCceeEEEeecc-CceEEEEeCCCCCC
Q psy12697 119 RLTLPLWDVERGECLNTLT-RHTEPVYSVAFSPDGKFLA-SGSFDKCVHIWSARTGQLVHSYKGT-GGIFEVCWNSRGTP 195 (602)
Q Consensus 119 ~~~i~vwd~~~~~~~~~l~-~h~~~V~~~~~s~d~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 195 (602)
+..|+..|+++......+. ..-..+..++|++++..|. +-..++.|..+++........+... .....+++...+..
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~ 93 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKN 93 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTE
T ss_pred CCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCE
Confidence 3567777777654333322 2235678999999666555 4456789999988765443333322 23455555543332
Q ss_pred CCCCCC-ccccccccccCCcceEee-CCCcceEEEEEcCCCCEEEEeeC--CCcEEEEeCCCCCCCCCccceEEEEEEec
Q psy12697 196 PNPPES-MEVDASIEIPQSKATKLI-GHESEVFICAWNPVKDFLASGSG--DSTARIWDMTDSTKKDPKELQIVLRHCIS 271 (602)
Q Consensus 196 ~~~~~~-~~~~~~~~~~~~~~~~l~-~h~~~v~~~~~~~~~~~l~s~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~ 271 (602)
+..... ................+. ..-.....+++.|....|+.+.. .+.|...+++..... ...
T Consensus 94 LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~------~l~----- 162 (628)
T 4a0p_A 94 LYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT------TLV----- 162 (628)
T ss_dssp EEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE------EEE-----
T ss_pred EEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE------EEE-----
Confidence 211111 111112222233233333 34456789999996666655542 456666666543311 110
Q ss_pred CCCcccCCCCceeEEeeCCCCCeEEEEe-CCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeC
Q psy12697 272 KGGTEVPSNKDVTSLDWNNNGSFLATGS-YDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA 350 (602)
Q Consensus 272 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~ 350 (602)
..-.....+++++++..|..+. ..+.|..+++++.....+.........+++.. +..+++-...+.|...|.
T Consensus 163 ------~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 163 ------PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANK 235 (628)
T ss_dssp ------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred ------CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEEC
Confidence 0124578999999776666654 45789999988755544444444556787764 333444445778888887
Q ss_pred CCCceeEEeeeccCCee------------------------eeec-cCCCe-----------------------EEEeeC
Q psy12697 351 ASGQCEQQFSFHSAPAL------------------------DVDW-QSNTS-----------------------FASCST 382 (602)
Q Consensus 351 ~~~~~~~~~~~~~~~~~------------------------~~~~-~~~~~-----------------------~~~~~~ 382 (602)
.+++....+......+. .++. .+++. ++..+.
T Consensus 236 ~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~ 315 (628)
T 4a0p_A 236 TSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQ 315 (628)
T ss_dssp TTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEE
T ss_pred CCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeec
Confidence 66654333221100000 0110 01011 122222
Q ss_pred CCeEEEEEcCCCce-eeEecc-CCCCeEEEEECCCCCEEEEEE-CCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCC
Q psy12697 383 DQHIHVCKLHSDKP-VKSFEG-HTNEVNAIKWDPQGLLLASCS-DDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGP 459 (602)
Q Consensus 383 ~~~i~i~d~~~~~~-~~~~~~-~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~ 459 (602)
...|+-..+..... ...+.. .-..+..++|++....|+.+. ..+.|+.+++........+....
T Consensus 316 ~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~------------- 382 (628)
T 4a0p_A 316 KSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSV------------- 382 (628)
T ss_dssp TTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----------------
T ss_pred cceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEccc-------------
Confidence 23333333322110 011111 123467788887655555444 34566666654322111111000
Q ss_pred CCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEE-EEEeCCCeEEEEeCCCCceeeee-cccCCCeeEeeecC-CceE
Q psy12697 460 ETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYI-LSAGVDKTTIIWDAASGQCEQQF-SFHSAPALDVDWQS-NTSF 536 (602)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~s~-~~~l 536 (602)
........+..+++...++.| .+-+..+.|.+.++. |+....+ ........++++.| .|.|
T Consensus 383 ---------------~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~l 446 (628)
T 4a0p_A 383 ---------------PSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYM 446 (628)
T ss_dssp --------------------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEE
T ss_pred ---------------ccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeE
Confidence 000012346678888776544 455567889999986 5444333 23345688999999 5644
Q ss_pred EEee-CCC--cEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEecc
Q psy12697 537 ASCS-TDQ--HIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASAS 594 (602)
Q Consensus 537 ~~~~-~d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~ 594 (602)
.... ... .|...+++.... ..+-.. .-.....|+++++++.|..+..
T Consensus 447 y~tD~g~~~~~I~r~~~dG~~~-~~l~~~----------~l~~P~gla~D~~~~~LYw~D~ 496 (628)
T 4a0p_A 447 YFTNLQERSPKIERAALDGTER-EVLFFS----------GLSKPIALALDSRLGKLFWADS 496 (628)
T ss_dssp EEEEEETTEEEEEEEETTSCSC-EEEECS----------SCSCEEEEEEETTTTEEEEEET
T ss_pred EEeecCCCCCeEEEEeCCCCCc-EEEEec----------cCCCccEEEEeCCCCEEEEEeC
Confidence 3333 222 455555543222 111110 0133577888887766666544
No 269
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.61 E-value=6.5e-05 Score=69.90 Aligned_cols=233 Identities=7% Similarity=-0.026 Sum_probs=136.7
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCC--C-eEEEEEcCCCceee
Q psy12697 322 GPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTD--Q-HIHVCKLHSDKPVK 398 (602)
Q Consensus 322 ~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~i~i~d~~~~~~~~ 398 (602)
.....++|+++++.+++-..++.|..||.... ....+. ....+..+++.+++.++++... + .|..++..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 45678999999986666667889999997653 333332 2345778888888777666532 2 47777877776433
Q ss_pred Eecc-CCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCee-eEeeccccccEEEEEECCCCCCCCCCCcceeeeeeecc
Q psy12697 399 SFEG-HTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNC-VHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTL 476 (602)
Q Consensus 399 ~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (602)
.... .......++..+++..+++-..++.|..+|...++. +....... .+. ..
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~--------~~~-----------------~~ 164 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPML--------ARS-----------------NS 164 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGG--------SCS-----------------ST
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcc--------ccc-----------------cc
Confidence 2221 122345566666655555544688888888765421 11111000 000 00
Q ss_pred CCccCCeEEEEEccCCCEEEEE-eCCCeEEEEeCCC-Cce--eeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecC
Q psy12697 477 GQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAAS-GQC--EQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLH 551 (602)
Q Consensus 477 ~~~~~~v~~i~~s~~~~~l~s~-~~dg~i~iwd~~~-~~~--~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~ 551 (602)
...-.....+ +|++++|..+ ...+.|..+|+.. ++. ...+. .......+++.++| .+++....+.|.+++..
T Consensus 165 ~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 165 ESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp TCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred cCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 0011123344 7888766554 4568899999874 332 11221 11345678999999 66666667889999854
Q ss_pred CCCceeeeecccccceEEEEec-CCcEEEEEEC---CCCCeEEEeccC
Q psy12697 552 SDKPVKSFEGHTTGQLVHSYKG-TGGIFEVCWN---SRGDKVGASASD 595 (602)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~~l~~s---pdg~~l~~~~~d 595 (602)
++.... . .+.. -....+++|. ||++.|++++..
T Consensus 242 -G~~~~~-~---------~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 242 -RSTTII-A---------QAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp -CCEEEE-E---------CGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred -CCEEEE-e---------ecccccCCceEEEEecccCCCCEEEEECCC
Confidence 332111 0 0111 1457899999 898888877654
No 270
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.61 E-value=0.0004 Score=65.06 Aligned_cols=267 Identities=9% Similarity=0.049 Sum_probs=141.0
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecc----cccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCcee
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLG----QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE 356 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 356 (602)
..+.++.+.+++..+++| ..|.|....-.++.-.... .....+..+.+.+ + .++.++..+.|.. ....++.-
T Consensus 36 ~~~~~v~~~~~~~~~~~G-~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~~g~i~~-S~DgG~tW 111 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLVG-VNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGEPPIMLH-TTDGGQSW 111 (327)
T ss_dssp SCEEEEEESSSSCEEEEE-TTTEEEEESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEETTEEEE-ESSTTSSC
T ss_pred CcEEEEEECCCCcEEEEc-CCCeEEEeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEECCCeEEE-ECCCCCCc
Confidence 568899998877777754 5676543322233222221 1244688999976 3 3444556664443 22223322
Q ss_pred EEeee---ccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeE-eccCCCCeEEEEECCCCCEEEEEECCCeEEEEe
Q psy12697 357 QQFSF---HSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKS-FEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWS 432 (602)
Q Consensus 357 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 432 (602)
..... ....+..+.+.+++.+++++.++.|+. ....++.-.. .......+..+++.|++.+++.+...+..+-+|
T Consensus 112 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d 190 (327)
T 2xbg_A 112 SQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWE 190 (327)
T ss_dssp EECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEEC
T ss_pred eECccccCCCCCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeC
Confidence 22211 123455666656666666666665433 2222332222 233455788999999988887765443333333
Q ss_pred C--CCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCC
Q psy12697 433 L--DKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 510 (602)
Q Consensus 433 ~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~ 510 (602)
- .+.+.+. .. ....+..+.++++++++ .++.+|.+++++..
T Consensus 191 ~gG~tW~~~~--~~----------------------------------~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D 233 (327)
T 2xbg_A 191 PGQTAWEPHN--RT----------------------------------TSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPD 233 (327)
T ss_dssp TTCSSCEEEE--CC----------------------------------SSSCEEEEEECTTSCEE-EEETTTEEEEEETT
T ss_pred CCCCceeECC--CC----------------------------------CCCccceeEECCCCCEE-EEeCCceEEEecCC
Confidence 2 1112111 01 22345666677777655 44567888777433
Q ss_pred CCceeeeecc----cCCCeeEeeecCCceEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECCCC
Q psy12697 511 SGQCEQQFSF----HSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRG 586 (602)
Q Consensus 511 ~~~~~~~~~~----~~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg 586 (602)
.++.-..+.. +...+.++.+.+++.++.++.++.|. +..+.++.-..+.... .....+.++.|.+++
T Consensus 234 ~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~-~S~DgG~tW~~~~~~~--------~~~~~~~~v~~~~~~ 304 (327)
T 2xbg_A 234 NSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALL-CSQDGGQTWQQDVDVK--------KVPSNFYKILFFSPD 304 (327)
T ss_dssp EEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCEE-EESSTTSSCEECGGGT--------TSSSCCCEEEEEETT
T ss_pred CCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeEE-EeCCCCcccEEcCccC--------CCCCCeEEEEEECCC
Confidence 3433222221 22358889999888555555677763 4444443222221110 012457788887555
Q ss_pred CeEEEeccCCeEE
Q psy12697 587 DKVGASASDGSVF 599 (602)
Q Consensus 587 ~~l~~~~~dg~v~ 599 (602)
. +++++.+|.|.
T Consensus 305 ~-~~~~G~~G~i~ 316 (327)
T 2xbg_A 305 Q-GFILGQKGILL 316 (327)
T ss_dssp E-EEEECSTTEEE
T ss_pred c-eEEEcCCceEE
Confidence 4 66667777664
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.58 E-value=0.00014 Score=69.98 Aligned_cols=241 Identities=10% Similarity=-0.026 Sum_probs=144.4
Q ss_pred eEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEE-ecCCcEEEEeCCCCceeEEeeec
Q psy12697 284 TSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAASGQCEQQFSFH 362 (602)
Q Consensus 284 ~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~~ 362 (602)
+|.+..+. .+|+.+ ....|+.+++.+.....+......+..++|++.+..|+.+ ...+.|..+++........+...
T Consensus 80 ~C~~~~~~-~~l~~~-~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~ 157 (386)
T 3v65_B 80 SCKALGPE-PVLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG 157 (386)
T ss_dssp CEEECSSC-CEEEEE-CBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS
T ss_pred eECCcccc-ceeEee-cCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC
Confidence 34444453 344443 3456888888866555544445568899999866666654 45678999998766544333322
Q ss_pred cCCeeeeeccC--CCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEEC-C-CeEEEEeCCCCee
Q psy12697 363 SAPALDVDWQS--NTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSD-D-MTLKIWSLDKDNC 438 (602)
Q Consensus 363 ~~~~~~~~~~~--~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~ 438 (602)
......+++.+ +..+++-...+.|.+.++........+.........++++|.+..|+.... . +.|..++++....
T Consensus 158 ~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 158 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc
Confidence 23344455543 344555566778888888765444444444466899999997766665543 3 5677777653221
Q ss_pred eEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE-eCCCeEEEEeCCCCceeee
Q psy12697 439 VHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAASGQCEQQ 517 (602)
Q Consensus 439 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~ 517 (602)
...... .-.....++++|++..|..+ ...+.|..+|+........
T Consensus 238 ~~~~~~----------------------------------~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 238 RIIADT----------------------------------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 283 (386)
T ss_dssp EEEECS----------------------------------SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEE
T ss_pred EEEEEC----------------------------------CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEE
Confidence 111110 12235678888766655554 4567899999875433333
Q ss_pred ecccCCCeeEeeecCCceEEEeeCCCcEEEeecCCCCceeeee
Q psy12697 518 FSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE 560 (602)
Q Consensus 518 ~~~~~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 560 (602)
+.........+++..+..+++-...+.|..++..+++.+..+.
T Consensus 284 ~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 284 ISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp ECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 3333345667777443355666677888888866666555544
No 272
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.58 E-value=3.8e-06 Score=87.43 Aligned_cols=239 Identities=10% Similarity=0.087 Sum_probs=132.9
Q ss_pred EEEECC-CCCeEEEeeCCc-----------eEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccC
Q psy12697 145 SVAFSP-DGKFLASGSFDK-----------CVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQ 212 (602)
Q Consensus 145 ~~~~s~-d~~~l~s~~~d~-----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (602)
++++.| ++++++.|+.+. .+.+||..+++....
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~----------------------------------- 234 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDR----------------------------------- 234 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCC-----------------------------------
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeC-----------------------------------
Confidence 566777 899999987543 578888877653211
Q ss_pred CcceEe-eCCCcceEEEEEcCCCCEEEEeeC-CCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC
Q psy12697 213 SKATKL-IGHESEVFICAWNPVKDFLASGSG-DSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN 290 (602)
Q Consensus 213 ~~~~~l-~~h~~~v~~~~~~~~~~~l~s~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 290 (602)
..+ ..+.....++++.+++++++.|+. +..+.+||..+..-.... ..+....-.+++..+
T Consensus 235 ---~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~---------------~~~~~R~~~s~~~~~ 296 (656)
T 1k3i_A 235 ---TVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGP---------------DMQVARGYQSSATMS 296 (656)
T ss_dssp ---EEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECC---------------CCSSCCSSCEEEECT
T ss_pred ---cccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECC---------------CCCccccccceEEec
Confidence 011 112223345677888999999884 567999998765321100 011122234556667
Q ss_pred CCCeEEEEe-CC-----CeEEEEcCCCcceeeccc-----ccCCeEEEEEccCCCEEEEEecCC---------cEEEEeC
Q psy12697 291 NGSFLATGS-YD-----GYARIWTSDGSLKSTLGQ-----HKGPIFALKWNKRGNYILSAGVDK---------TTIIWDA 350 (602)
Q Consensus 291 ~~~~l~~~~-~d-----g~i~i~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~dg---------~i~~wd~ 350 (602)
++++++.|+ .+ ..+.+||........+.. ....-....+..++..++.++.+| .+..||.
T Consensus 297 dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~ 376 (656)
T 1k3i_A 297 DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYT 376 (656)
T ss_dssp TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEEC
T ss_pred CCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeec
Confidence 899999998 34 468999986544333210 000000011223445555554443 5678888
Q ss_pred CCCceeEEeeeccC---------Ceeeeec--cCCCeEEEeeCCC-----------eEEEEEcCCCceeeEe--ccCCCC
Q psy12697 351 ASGQCEQQFSFHSA---------PALDVDW--QSNTSFASCSTDQ-----------HIHVCKLHSDKPVKSF--EGHTNE 406 (602)
Q Consensus 351 ~~~~~~~~~~~~~~---------~~~~~~~--~~~~~~~~~~~~~-----------~i~i~d~~~~~~~~~~--~~~~~~ 406 (602)
.+............ .-.++.+ ..+..+++|+.++ .+.+||..+.+-.... ..+...
T Consensus 377 ~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R 456 (656)
T 1k3i_A 377 SGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFAR 456 (656)
T ss_dssp STTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCC
T ss_pred CCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCc
Confidence 87764433322211 1122222 2345566666432 6778887776543322 222222
Q ss_pred -eEEEEECCCCCEEEEEECC-----------CeEEEEeCCCC
Q psy12697 407 -VNAIKWDPQGLLLASCSDD-----------MTLKIWSLDKD 436 (602)
Q Consensus 407 -i~~~~~~~~~~~l~~~~~d-----------g~i~iwd~~~~ 436 (602)
-.+++..|++++++.|+.+ ..+.+||..+.
T Consensus 457 ~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 457 TFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp BSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred ccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 2345677899999999864 35778887654
No 273
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.56 E-value=4.5e-05 Score=80.58 Aligned_cols=191 Identities=9% Similarity=0.028 Sum_probs=114.2
Q ss_pred ceEEEEEc-CCCCEEEEeeC-C----CcEEEEeCCCC-CCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEE
Q psy12697 224 EVFICAWN-PVKDFLASGSG-D----STARIWDMTDS-TKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLA 296 (602)
Q Consensus 224 ~v~~~~~~-~~~~~l~s~~~-d----g~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 296 (602)
.+...+|| |||++|+.+.. + ..|+++|+.++ +.... .+ . .....++|+|||+.|+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~----~-------------~~~~~~~WspDg~~l~ 236 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KV----S-------------GTNGEIVWGPDHTSLF 236 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CE----E-------------EECSCCEECSSTTEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cc----c-------------CceeeEEEecCCCEEE
Confidence 67889999 99998886543 2 25999999887 52210 00 0 1135788999999888
Q ss_pred EEeCC-----CeEEEEcCCCcc---eeecc-cccCCeEEEEEccCCCEEEEEec---CCcEEEEeCCCCc-ee--EEe-e
Q psy12697 297 TGSYD-----GYARIWTSDGSL---KSTLG-QHKGPIFALKWNKRGNYILSAGV---DKTTIIWDAASGQ-CE--QQF-S 360 (602)
Q Consensus 297 ~~~~d-----g~i~i~~~~~~~---~~~~~-~~~~~i~~~~~~~~~~~l~~~~~---dg~i~~wd~~~~~-~~--~~~-~ 360 (602)
....+ ..|.++++.+.. ...+. ........+.|+|||++|+..+. ...|.++|+.++. .. ..+ .
T Consensus 237 y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~ 316 (751)
T 2xe4_A 237 YVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP 316 (751)
T ss_dssp EEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC
T ss_pred EEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec
Confidence 77765 257778876432 12222 22345678899999999886653 3468888988752 12 222 2
Q ss_pred eccCCeeeeeccCCCeEEEeeCC-----CeEEEEEcCCCceeeE-eccCCC--CeEEEEECCCCCEEEEEECCCeE--EE
Q psy12697 361 FHSAPALDVDWQSNTSFASCSTD-----QHIHVCKLHSDKPVKS-FEGHTN--EVNAIKWDPQGLLLASCSDDMTL--KI 430 (602)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i--~i 430 (602)
........+.|..++.++..+.. ..|..+++.+...... +..+.. .+..+.+. .+.++++...++.. .+
T Consensus 317 ~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 317 REKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp CCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEE
T ss_pred CCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEE
Confidence 23344455555556666555433 3677788765322222 233333 35556665 33455666677754 45
Q ss_pred EeC
Q psy12697 431 WSL 433 (602)
Q Consensus 431 wd~ 433 (602)
+++
T Consensus 396 ~dl 398 (751)
T 2xe4_A 396 MMA 398 (751)
T ss_dssp EEC
T ss_pred Eec
Confidence 554
No 274
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.52 E-value=9.4e-05 Score=65.51 Aligned_cols=208 Identities=11% Similarity=0.158 Sum_probs=131.5
Q ss_pred ecccccCCeEEEEEccCCCEEEE-EecCCcEEEEeCCCCceeEEeeec-cCCeeeeeccCCCeEEEee-CCCeEEEEEcC
Q psy12697 316 TLGQHKGPIFALKWNKRGNYILS-AGVDKTTIIWDAASGQCEQQFSFH-SAPALDVDWQSNTSFASCS-TDQHIHVCKLH 392 (602)
Q Consensus 316 ~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~i~i~d~~ 392 (602)
.+.+-...+..++|+|+++.|++ ...++.|...|.. ++.++.+... ....-.+++.+++.+++.. .++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 34455567999999998776654 6678889999988 8888877543 2467778888888876654 56789999876
Q ss_pred CCce---eeEec------cCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCC
Q psy12697 393 SDKP---VKSFE------GHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSN 463 (602)
Q Consensus 393 ~~~~---~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 463 (602)
.... +.... ..+.....++|+|.++.|.++.+.....+|.++ +. . +...+. +...+.
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~-g~-----~-~~~~l~-i~~~~~------ 165 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN-GL-----L-SSNELH-ISKDKA------ 165 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE-ST-----T-CSSCCE-EEECHH------
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc-cc-----c-cCCcee-eecchh------
Confidence 5542 12221 123457899999999888887766555566554 10 0 000000 000000
Q ss_pred CCcceeeeeeeccCCccCCeEEEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeeecccC---------CCeeEeeecCC
Q psy12697 464 PNMSLIFILKSTLGQHKGPIFALKWNKR-GNYILSAGVDKTTIIWDAASGQCEQQFSFHS---------APALDVDWQSN 533 (602)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~v~~i~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------~~v~~~~~s~~ 533 (602)
+ .-..+...+.++++.|. +++++.......|.++|.. |+.+..+.-.. ...-.|+|.++
T Consensus 166 --------~--~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~ 234 (255)
T 3qqz_A 166 --------L--QRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDAS 234 (255)
T ss_dssp --------H--HHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTT
T ss_pred --------h--ccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCC
Confidence 0 00012234678888884 5566677777889999966 65555444321 24678999999
Q ss_pred ceEEEeeCCCcEEEee
Q psy12697 534 TSFASCSTDQHIHVCK 549 (602)
Q Consensus 534 ~~l~~~~~d~~i~iw~ 549 (602)
|.|...+..+.++++.
T Consensus 235 G~lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 235 GNIYIVSEPNRFYRFT 250 (255)
T ss_dssp CCEEEEETTTEEEEEE
T ss_pred CCEEEEcCCceEEEEE
Confidence 9555557777666665
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.51 E-value=0.00048 Score=64.18 Aligned_cols=223 Identities=12% Similarity=0.003 Sum_probs=131.6
Q ss_pred CeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEe-cCCcEEEEeCCC----CceeEEeeeccCCeeeeeccC--C
Q psy12697 302 GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAAS----GQCEQQFSFHSAPALDVDWQS--N 374 (602)
Q Consensus 302 g~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~wd~~~----~~~~~~~~~~~~~~~~~~~~~--~ 374 (602)
..|+..++++.....+.........+.|++.+..|+.+. ..+.|..+++.. ......+.........+++.+ +
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC
Confidence 457888877654433333455678999998766666554 568899999875 222222222222345555543 3
Q ss_pred CeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECC--CeEEEEeCCCCeeeEeeccccccEEEE
Q psy12697 375 TSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDD--MTLKIWSLDKDNCVHDLQAHNKEIYTI 452 (602)
Q Consensus 375 ~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~i~~~ 452 (602)
..+++-...+.|.++++........+.........++++|.+..|+.+... +.|...+++. .....+..
T Consensus 90 ~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~-------- 160 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVT-------- 160 (316)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEEC--------
T ss_pred eEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEE--------
Confidence 445555677899999987654433333344568899999976666555543 6777777643 22211110
Q ss_pred EECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe-CCCeEEEEeCCCCceeeeecc---cCCCeeEe
Q psy12697 453 KWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAASGQCEQQFSF---HSAPALDV 528 (602)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~ 528 (602)
..-.....+++++++..|..+. ..+.|..+|+... ....+.. .-.....+
T Consensus 161 -------------------------~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~gi 214 (316)
T 1ijq_A 161 -------------------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSL 214 (316)
T ss_dssp -------------------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEE
T ss_pred -------------------------CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEE
Confidence 0123456788888766665554 5678999998743 2333321 12335677
Q ss_pred eecCCceEEEeeCCCcEEEeecCCCCceeee
Q psy12697 529 DWQSNTSFASCSTDQHIHVCKLHSDKPVKSF 559 (602)
Q Consensus 529 ~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 559 (602)
++..+..+++-...+.|..++..+++.+..+
T Consensus 215 av~~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 215 AVFEDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEECCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 7754335556667788999988777655544
No 276
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.49 E-value=1.6e-05 Score=84.03 Aligned_cols=240 Identities=10% Similarity=-0.013 Sum_probs=131.2
Q ss_pred ceEEEEEC-CCCCeEEEeeC-C----ceEEEEecCCc-eeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCc
Q psy12697 142 PVYSVAFS-PDGKFLASGSF-D----KCVHIWSARTG-QLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSK 214 (602)
Q Consensus 142 ~V~~~~~s-~d~~~l~s~~~-d----~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (602)
.+...+|| |||++||-+.. + .+|.++|+.+| +.+..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~------------------------------------- 217 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD------------------------------------- 217 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-------------------------------------
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-------------------------------------
Confidence 68889999 99999886542 2 35999999988 53210
Q ss_pred ceEeeCCCcceEEEEEcCCCCEEEEeeCC-----CcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeC
Q psy12697 215 ATKLIGHESEVFICAWNPVKDFLASGSGD-----STARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWN 289 (602)
Q Consensus 215 ~~~l~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 289 (602)
.+. .....++|+||++.|+....| ..|.++++.++.... ..... .+.......+.|+
T Consensus 218 --~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~----~lv~~---------~~~~~~~~~~~~S 279 (751)
T 2xe4_A 218 --KVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSED----VCLYE---------EHNPLFSAFMYKA 279 (751)
T ss_dssp --CEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGC----EEEEE---------CCCTTCEEEEEEC
T ss_pred --ccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhc----EEEEe---------cCCCceEEEEEEC
Confidence 000 012357899999888877665 257777776543211 00100 0112335678999
Q ss_pred CCCCeEEEEeC---CCeEEEEcCCCc---c--eeecccccCCeEEEEEccCCCEEE-EEecC----CcEEEEeCCCC-ce
Q psy12697 290 NNGSFLATGSY---DGYARIWTSDGS---L--KSTLGQHKGPIFALKWNKRGNYIL-SAGVD----KTTIIWDAASG-QC 355 (602)
Q Consensus 290 ~~~~~l~~~~~---dg~i~i~~~~~~---~--~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d----g~i~~wd~~~~-~~ 355 (602)
|||++|+.... ...|.++|+.+. . .............+.|+. ++.|+ ....+ ..|..+|+.++ ..
T Consensus 280 pDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~ 358 (751)
T 2xe4_A 280 ADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDW 358 (751)
T ss_dssp TTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCC
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccc
Confidence 99999887663 346888887643 2 222333445555665544 55554 44333 25667777652 22
Q ss_pred eE-Eeeecc-CCeeeeeccCCCeEEEeeCCCe--EEEEEc-------CCCceeeEeccCC-CCeEEEEE----CCCCC-E
Q psy12697 356 EQ-QFSFHS-APALDVDWQSNTSFASCSTDQH--IHVCKL-------HSDKPVKSFEGHT-NEVNAIKW----DPQGL-L 418 (602)
Q Consensus 356 ~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--i~i~d~-------~~~~~~~~~~~~~-~~i~~~~~----~~~~~-~ 418 (602)
.. .+.... ..+..+.+..+..+++...++. |.++++ ..++....+.... ..+..+.+ ++++. +
T Consensus 359 ~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l 438 (751)
T 2xe4_A 359 SHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTF 438 (751)
T ss_dssp CCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCE
T ss_pred eeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEE
Confidence 21 122111 1345566665555666777775 555665 3333133332111 12333322 34554 4
Q ss_pred EEEEECC---CeEEEEeCCCCe
Q psy12697 419 LASCSDD---MTLKIWSLDKDN 437 (602)
Q Consensus 419 l~~~~~d---g~i~iwd~~~~~ 437 (602)
+++.+.. ..+..+|+.+++
T Consensus 439 ~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 439 RMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp EEEEEETTEEEEEEEECTTTCC
T ss_pred EEEEeCCCCCCEEEEEECCCCc
Confidence 4444432 457778877654
No 277
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.47 E-value=0.002 Score=65.94 Aligned_cols=330 Identities=8% Similarity=-0.030 Sum_probs=170.3
Q ss_pred cceEEEEEcCCCCEEE-EeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeC-
Q psy12697 223 SEVFICAWNPVKDFLA-SGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSY- 300 (602)
Q Consensus 223 ~~v~~~~~~~~~~~l~-s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~- 300 (602)
.....+++.+.+..|+ +-...+.|.+.+++..... .+.. ..-.....+++.|.+..|+....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~------~l~~----------~~l~~P~~Iavdp~~g~ly~tD~g 147 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK------VLFW----------QELDQPRAIALDPSSGFMYWTDWG 147 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE------EEEC----------SSCSCCCCEEEETTTTEEEEEECS
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE------EEEe----------CCCCCCceEEEecCCCeEEEeccC
Confidence 5678899998665444 4456788999988754321 1100 01244678999997666655543
Q ss_pred -CCeEEEEcCCCcceeecc-cccCCeEEEEEccCCCEEEEEe-cCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeE
Q psy12697 301 -DGYARIWTSDGSLKSTLG-QHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSF 377 (602)
Q Consensus 301 -dg~i~i~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (602)
.+.|...+++|.....+. ..-.....+++++++..|+.+. ..+.|...|+..................+++..+..+
T Consensus 148 ~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly 227 (619)
T 3s94_A 148 EVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILY 227 (619)
T ss_dssp SSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEE
T ss_pred CCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEE
Confidence 467877888876554443 2345678999999777776654 4567888888654333222212233456666666556
Q ss_pred EEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEEC-CC----C---------------------CEEEEEECCCeEEEE
Q psy12697 378 ASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWD-PQ----G---------------------LLLASCSDDMTLKIW 431 (602)
Q Consensus 378 ~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~-~~----~---------------------~~l~~~~~dg~i~iw 431 (602)
++-...+.|...|..+++....+.........+++. |. + ...-+.+.+|....-
T Consensus 228 ~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~ 307 (619)
T 3s94_A 228 WTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLE 307 (619)
T ss_dssp EECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCT
T ss_pred EecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecc
Confidence 666677889999988776554443322223333332 10 0 001111111110000
Q ss_pred eCCCCeee-----EeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE-eCCCeEE
Q psy12697 432 SLDKDNCV-----HDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTI 505 (602)
Q Consensus 432 d~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~-~~dg~i~ 505 (602)
| ...|. .-+-.....|..+.+.+.... .. . .....-..+.+++|.+.+..|..+ ...+.|+
T Consensus 308 d--~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~-------~~---~-~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~ 374 (619)
T 3s94_A 308 N--GKTCKDGATELLLLARRTDLRRISLDTPDFT-------DI---V-LQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIR 374 (619)
T ss_dssp T--SSCBCSSCSEEEEEEESSCEEEEESSSTTCC-------CE---E-CCCSCCSSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred c--CcccCCCCceEEEEEcccceEEEecCCCccc-------ee---E-EeccccCccEEEEEEcCCCeEEEEeCCCCeEE
Confidence 0 00000 000011122222222211100 00 0 000112346789999865555544 4578899
Q ss_pred EEeCCCCceeeeecccCCCeeEeeecCCc--eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEEC
Q psy12697 506 IWDAASGQCEQQFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWN 583 (602)
Q Consensus 506 iwd~~~~~~~~~~~~~~~~v~~~~~s~~~--~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s 583 (602)
.+++........+...-.....+++.+.+ .+.+-...+.|.+.++..... ..+... .-.....|++.
T Consensus 375 r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~-~~l~~~----------~l~~P~~iavd 443 (619)
T 3s94_A 375 RSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMR-KILISE----------DLEEPRAIVLD 443 (619)
T ss_dssp EEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECT----------TCCSEEEEEEE
T ss_pred EEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeE-EEEEEC----------CCCCeeeEEEE
Confidence 99987544333333333456788887644 445555678899988765422 222111 11345677777
Q ss_pred CCCCeEEEe
Q psy12697 584 SRGDKVGAS 592 (602)
Q Consensus 584 pdg~~l~~~ 592 (602)
|....|+.+
T Consensus 444 p~~G~ly~t 452 (619)
T 3s94_A 444 PMVGYMYWT 452 (619)
T ss_dssp TTTTEEEEE
T ss_pred cCCCcEEEe
Confidence 764444443
No 278
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.45 E-value=0.0011 Score=62.15 Aligned_cols=277 Identities=10% Similarity=-0.005 Sum_probs=149.2
Q ss_pred CcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCC
Q psy12697 222 ESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYD 301 (602)
Q Consensus 222 ~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 301 (602)
...+.++.|.+.+..+++ +.+|.| +...+.++.=...... .......+.++.+.+ +..++ ++..
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~------------~~~~~~~~~~i~~~~-~~~~~-~g~~ 98 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTLV------------LDHSDYRFNSVSFQG-NEGWI-VGEP 98 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCCC------------CSCCCCEEEEEEEET-TEEEE-EEET
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCCC------------CCCCCccEEEEEecC-CeEEE-EECC
Confidence 457899999877777774 456654 2233322211000000 001134688888876 44444 4556
Q ss_pred CeEEEEcCCCcceeecc---cccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEE-eeeccCCeeeeeccCCCeE
Q psy12697 302 GYARIWTSDGSLKSTLG---QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ-FSFHSAPALDVDWQSNTSF 377 (602)
Q Consensus 302 g~i~i~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 377 (602)
|.|..-.-.++.-.... .+...+..+.+.+++..++++ .+|.|..- ...++.-.. .......+..+.+.+++.+
T Consensus 99 g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~ 176 (327)
T 2xbg_A 99 PIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEY 176 (327)
T ss_dssp TEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCE
T ss_pred CeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcE
Confidence 65554332243333322 233557788887777655554 45544321 122322222 2233446778888888877
Q ss_pred EEeeCCCeEEEEEcCCCceeeEe-ccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECC
Q psy12697 378 ASCSTDQHIHVCKLHSDKPVKSF-EGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSP 456 (602)
Q Consensus 378 ~~~~~~~~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~ 456 (602)
++.+.+|.++.-+-..++.-..+ ......+..+.++++++.+ ..+.+|.+++.+.+.++.-..+....
T Consensus 177 ~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~---------- 245 (327)
T 2xbg_A 177 VAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPL---------- 245 (327)
T ss_dssp EEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTT----------
T ss_pred EEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCc----------
Confidence 77777777665432212222221 2345578899999998765 45567877776433233222111100
Q ss_pred CCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc---cCCCeeEeeecCC
Q psy12697 457 TGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF---HSAPALDVDWQSN 533 (602)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~s~~ 533 (602)
......+.++.+.+++.+++++ .+|.| .+..+.|+.-..+.. ....+.++.|.++
T Consensus 246 --------------------~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~ 303 (327)
T 2xbg_A 246 --------------------RRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSP 303 (327)
T ss_dssp --------------------SSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEET
T ss_pred --------------------ccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECC
Confidence 0012245667777777766655 46766 344444544333332 2356788888766
Q ss_pred ceEEEeeCCCcEEEee
Q psy12697 534 TSFASCSTDQHIHVCK 549 (602)
Q Consensus 534 ~~l~~~~~d~~i~iw~ 549 (602)
+.+++++.+|.|.-++
T Consensus 304 ~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 304 DQGFILGQKGILLRYV 319 (327)
T ss_dssp TEEEEECSTTEEEEEC
T ss_pred CceEEEcCCceEEEEc
Confidence 6777788899877665
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.44 E-value=0.00012 Score=71.52 Aligned_cols=151 Identities=10% Similarity=0.107 Sum_probs=98.3
Q ss_pred ceeEEeeCC-CCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecC-C----cEEEEeCCCCce
Q psy12697 282 DVTSLDWNN-NGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVD-K----TTIIWDAASGQC 355 (602)
Q Consensus 282 ~i~~~~~~~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g----~i~~wd~~~~~~ 355 (602)
....++++| ++..|.++...+.|+.+|.++..+..+.........++|++++++|+.+... + .+..++ ..+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCCce
Confidence 467889998 4556666666588999999876665555555678899999999977766542 1 233333 33322
Q ss_pred e--EEeeeccCCeeeeeccC-CCeEEEee-CCCeEEEEEcCCCceeeEec-cCCCCeEEEEECCCCCEEEEE-ECCCeEE
Q psy12697 356 E--QQFSFHSAPALDVDWQS-NTSFASCS-TDQHIHVCKLHSDKPVKSFE-GHTNEVNAIKWDPQGLLLASC-SDDMTLK 429 (602)
Q Consensus 356 ~--~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~-~~dg~i~ 429 (602)
. ..+. .......+++.+ ++.++++. .++.|..++...+....... +.......++|+|+|++|+.+ ...+.|.
T Consensus 217 ~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 217 KVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp CSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 2 2222 233456677787 56655544 67889999988765422222 122457899999999955554 4568899
Q ss_pred EEeCC
Q psy12697 430 IWSLD 434 (602)
Q Consensus 430 iwd~~ 434 (602)
.++..
T Consensus 296 ~~~~d 300 (430)
T 3tc9_A 296 RSDYD 300 (430)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 98765
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.42 E-value=0.0008 Score=64.92 Aligned_cols=232 Identities=12% Similarity=0.000 Sum_probs=141.0
Q ss_pred eEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEe-cCCcEEEEeCCCC----ceeEEeeeccCCeee
Q psy12697 294 FLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAASG----QCEQQFSFHSAPALD 368 (602)
Q Consensus 294 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~----~~~~~~~~~~~~~~~ 368 (602)
+|+.+ ....|+..++++.....+......+..++|++....|+.+. ..+.|..+++... .....+.........
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eeEEe-ccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 34333 34678888888765555555567789999998766666554 4678888887652 222222222334445
Q ss_pred eecc--CCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEEC--CCeEEEEeCCCCeeeEeecc
Q psy12697 369 VDWQ--SNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSD--DMTLKIWSLDKDNCVHDLQA 444 (602)
Q Consensus 369 ~~~~--~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~ 444 (602)
+++. .+..+++-...+.|.+.++........+.........++++|.+..|+.... .+.|...+++..........
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~ 243 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 243 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC
Confidence 5544 3455556667789999998866554444444556889999997666665543 36777777653221111110
Q ss_pred ccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe-CCCeEEEEeCCCCceeeeecc--c
Q psy12697 445 HNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAASGQCEQQFSF--H 521 (602)
Q Consensus 445 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~--~ 521 (602)
.-.....|++++++..|..+. ..+.|..+|+........... .
T Consensus 244 ----------------------------------~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~ 289 (400)
T 3p5b_L 244 ----------------------------------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR 289 (400)
T ss_dssp ----------------------------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSST
T ss_pred ----------------------------------CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCC
Confidence 123456788887776666654 467899999875433322222 1
Q ss_pred CCCeeEeeecCCceEEEeeCCCcEEEeecCCCCceeeee
Q psy12697 522 SAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE 560 (602)
Q Consensus 522 ~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 560 (602)
-.....+++..+..+.+-...+.|..++..+++.+..+.
T Consensus 290 l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 290 LAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp TSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred CCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 234556777444455566677889999977776665554
No 281
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.42 E-value=0.00046 Score=64.14 Aligned_cols=226 Identities=8% Similarity=-0.046 Sum_probs=133.9
Q ss_pred CCeEEEEcCCCcc--eeecccccCCeEEEEEccCCCEEEEE-ecCCcEEEEeCCCCcee-EEeeeccCCeeeeecc--CC
Q psy12697 301 DGYARIWTSDGSL--KSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAASGQCE-QQFSFHSAPALDVDWQ--SN 374 (602)
Q Consensus 301 dg~i~i~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~~-~~~~~~~~~~~~~~~~--~~ 374 (602)
...|+.+++++.. .............+.|.+.+..|+.+ ...+.|..++...+... ......-.....+++. .+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 4678888887642 22222223456789999865555544 45678888988765321 1222222233444444 34
Q ss_pred CeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEEC--CCeEEEEeCCCCeeeEeeccccccEEEE
Q psy12697 375 TSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSD--DMTLKIWSLDKDNCVHDLQAHNKEIYTI 452 (602)
Q Consensus 375 ~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~i~~~ 452 (602)
..+++-...+.|.++++........+.........++++|.+..|+.+.. .+.|...+++... ...+..
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~-------- 162 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIIN-------- 162 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEEC--------
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEE--------
Confidence 44555566789999998765443333344566889999997666666553 4677777765321 111100
Q ss_pred EECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE-eCCCeEEEEeCCCCceeeeecccCCCeeEeeec
Q psy12697 453 KWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQ 531 (602)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 531 (602)
..-.....+++++++..|..+ ...+.|..+|+..................+++.
T Consensus 163 -------------------------~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~ 217 (318)
T 3sov_A 163 -------------------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF 217 (318)
T ss_dssp -------------------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE
T ss_pred -------------------------CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe
Confidence 011234678888866666555 456789999987433322222233445677776
Q ss_pred CCceEEEeeCCCcEEEeecCCCCceeeee
Q psy12697 532 SNTSFASCSTDQHIHVCKLHSDKPVKSFE 560 (602)
Q Consensus 532 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 560 (602)
.++.+.+-...+.|..++..+++....+.
T Consensus 218 ~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 218 EDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 55555666677889999987776555443
No 282
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.39 E-value=0.00097 Score=59.02 Aligned_cols=209 Identities=12% Similarity=0.104 Sum_probs=137.1
Q ss_pred eeeccCCceEEEEECCCCCeEE-EeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCC
Q psy12697 135 TLTRHTEPVYSVAFSPDGKFLA-SGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQS 213 (602)
Q Consensus 135 ~l~~h~~~V~~~~~s~d~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (602)
.+.+-...+..++++|++..|+ +...++.|...|.. ++.++.++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l--------------------------------- 66 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL--------------------------------- 66 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC---------------------------------
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec---------------------------------
Confidence 4555556899999999776554 56678999999987 877765532
Q ss_pred cceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCC
Q psy12697 214 KATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGS 293 (602)
Q Consensus 214 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 293 (602)
+-....-.+++.+++.++++.-.++.+.++++...... .......+. ....+.+.....++|+|.++
T Consensus 67 ------~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i-----~~~~~~~~~--~~~~~~N~g~EGLA~d~~~~ 133 (255)
T 3qqz_A 67 ------DFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV-----KILKKIKIP--LQESPTNCGFEGLAYSRQDH 133 (255)
T ss_dssp ------SSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE-----EEEEEEECC--CSSCCCSSCCEEEEEETTTT
T ss_pred ------CCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee-----eeeeeeccc--cccccccCCcceEEEeCCCC
Confidence 11245667888888887777667788999988765421 111111111 01224467789999999998
Q ss_pred eEEEEeCCCeEEEEcCCC----cceeec-------ccccCCeEEEEEccCCCEEE-EEecCCcEEEEeCCCCceeEEeee
Q psy12697 294 FLATGSYDGYARIWTSDG----SLKSTL-------GQHKGPIFALKWNKRGNYIL-SAGVDKTTIIWDAASGQCEQQFSF 361 (602)
Q Consensus 294 ~l~~~~~dg~i~i~~~~~----~~~~~~-------~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~ 361 (602)
.|.++.......+|..++ ...... ..+...+.++++.|....|+ .....+.+..+|.. ++.+..+..
T Consensus 134 ~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L 212 (255)
T 3qqz_A 134 TFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSL 212 (255)
T ss_dssp EEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEEC
T ss_pred EEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEc
Confidence 888777765555555432 111111 11234578999999765555 45556778888865 666666655
Q ss_pred cc---------CCeeeeeccCCCeEEEeeCCCeEEEEEc
Q psy12697 362 HS---------APALDVDWQSNTSFASCSTDQHIHVCKL 391 (602)
Q Consensus 362 ~~---------~~~~~~~~~~~~~~~~~~~~~~i~i~d~ 391 (602)
.. ...-.+++.+++.+.+.++.+.++.+.-
T Consensus 213 ~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 213 TKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTP 251 (255)
T ss_dssp STTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC
T ss_pred CCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEEe
Confidence 43 2567888999988888888887777754
No 283
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.35 E-value=0.00079 Score=63.64 Aligned_cols=206 Identities=9% Similarity=-0.079 Sum_probs=127.3
Q ss_pred CcceEEEEEcCCCCEEEEe-eCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeE-EEEe
Q psy12697 222 ESEVFICAWNPVKDFLASG-SGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFL-ATGS 299 (602)
Q Consensus 222 ~~~v~~~~~~~~~~~l~s~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~ 299 (602)
...+..++|.+.+..|+.+ ...+.|..+++...... ... . ........+++.+.+..| ++-.
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~------~~~----~------~~~~~p~glavd~~~g~ly~~d~ 135 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE------EVV----S------TGLESPGGLAVDWVHDKLYWTDS 135 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE------EEE----C------SSCSCCCEEEEETTTTEEEEEET
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCce------EEE----e------CCCCCccEEEEecCCCeEEEEcC
Confidence 3457889999866655544 45778888888754321 000 0 001345678888755444 5555
Q ss_pred CCCeEEEEcCCCcceeecc-cccCCeEEEEEccCCCEEEEEec-C-CcEEEEeCCCCceeEEeeeccCCeeeeeccC-CC
Q psy12697 300 YDGYARIWTSDGSLKSTLG-QHKGPIFALKWNKRGNYILSAGV-D-KTTIIWDAASGQCEQQFSFHSAPALDVDWQS-NT 375 (602)
Q Consensus 300 ~dg~i~i~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~ 375 (602)
..+.|.+.+.++.....+. ........+++.|.+..|+.+.. . +.|..+++............-.....+++.+ ++
T Consensus 136 ~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~ 215 (349)
T 3v64_C 136 GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGR 215 (349)
T ss_dssp TTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTT
T ss_pred CCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCC
Confidence 5688999999876554443 33456789999997666665543 3 6788888764333222222334467788875 45
Q ss_pred eEE-EeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeecc
Q psy12697 376 SFA-SCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQA 444 (602)
Q Consensus 376 ~~~-~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 444 (602)
.+. +-...+.|..+++........+.........+++. .+.++++-...+.|..++..+++....+..
T Consensus 216 ~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 216 RMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRN 284 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred EEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEecc
Confidence 544 44456789999987654333343344567788883 455555656678888888666666555543
No 284
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.33 E-value=0.00047 Score=66.27 Aligned_cols=215 Identities=10% Similarity=-0.074 Sum_probs=130.8
Q ss_pred CcceEEEEEcCCCCEEE-EeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeE-EEEe
Q psy12697 222 ESEVFICAWNPVKDFLA-SGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFL-ATGS 299 (602)
Q Consensus 222 ~~~v~~~~~~~~~~~l~-s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~ 299 (602)
...+..++|.+.+..|+ +-...+.|..+++...... .. .. ........+++.+.+..| ++-.
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~------~~----~~------~~~~~p~glavd~~~g~lY~~d~ 178 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE------EV----VS------TGLESPGGLAVDWVHDKLYWTDS 178 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE------EE----EC------SSCSCCCCEEEETTTTEEEEEET
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE------EE----Ee------CCCCCccEEEEEeCCCeEEEEcC
Confidence 34578899998665555 4445778888888754311 00 00 001234678888755444 5555
Q ss_pred CCCeEEEEcCCCcceeecc-cccCCeEEEEEccCCCEEEEEec-C-CcEEEEeCCCCceeEEeeeccCCeeeeeccC-CC
Q psy12697 300 YDGYARIWTSDGSLKSTLG-QHKGPIFALKWNKRGNYILSAGV-D-KTTIIWDAASGQCEQQFSFHSAPALDVDWQS-NT 375 (602)
Q Consensus 300 ~dg~i~i~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~ 375 (602)
..+.|.+.++++.....+. ........+++.|.+..|+.+.. . +.|..+++............-.....+++++ ++
T Consensus 179 ~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~ 258 (386)
T 3v65_B 179 GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGR 258 (386)
T ss_dssp TTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGT
T ss_pred CCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCC
Confidence 5678999998876544433 33356789999987776665543 3 6788888764433332222333466788874 34
Q ss_pred eE-EEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEE
Q psy12697 376 SF-ASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIK 453 (602)
Q Consensus 376 ~~-~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~ 453 (602)
.+ ++-...+.|..+++........+.........+++. .+.++++-...+.|..++..+++....+.........++
T Consensus 259 ~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~ 336 (386)
T 3v65_B 259 RMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIH 336 (386)
T ss_dssp EEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEE
T ss_pred EEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEE
Confidence 44 444556789999987554433344344567788883 455666666778899998777766666554333333343
No 285
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.33 E-value=0.00089 Score=65.27 Aligned_cols=246 Identities=8% Similarity=0.031 Sum_probs=136.6
Q ss_pred ceeEEeeCCC--CCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCC-----cEEEEeCCCCc
Q psy12697 282 DVTSLDWNNN--GSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDK-----TTIIWDAASGQ 354 (602)
Q Consensus 282 ~i~~~~~~~~--~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~~wd~~~~~ 354 (602)
....++|+|+ +..|.++...+.|+.++.....+..+.........++++++|+ |+.+...+ .+...+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe
Confidence 4578999984 4455555544889999986555555555556689999999999 55554321 13333322221
Q ss_pred ee-EEeeeccCCeeeeeccC-CCeEEEee-CCCeEEEEEcCCCceeeEe-c-cCCCCeEEEEECCCCCEEEEEE-CCCeE
Q psy12697 355 CE-QQFSFHSAPALDVDWQS-NTSFASCS-TDQHIHVCKLHSDKPVKSF-E-GHTNEVNAIKWDPQGLLLASCS-DDMTL 428 (602)
Q Consensus 355 ~~-~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~i~i~d~~~~~~~~~~-~-~~~~~i~~~~~~~~~~~l~~~~-~dg~i 428 (602)
.. ..+. .......+++.+ ++.+.++. .++.|+.++..++.....+ . +....-..++|+|+++.|..+. ..+.|
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 10 1111 233455677777 66666554 5678999998877652222 1 1122345799999999555554 56789
Q ss_pred EEEeCCC--Ceee--EeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEE---------ccCCCEE
Q psy12697 429 KIWSLDK--DNCV--HDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKW---------NKRGNYI 495 (602)
Q Consensus 429 ~iwd~~~--~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~---------s~~~~~l 495 (602)
+.+++.. +... ..+.+ .+...... . .......-.....+++ .++|.++
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag----------~~g~~g~~----d-----g~~~~a~~~~P~giav~~n~~y~~dd~~g~ly 358 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCG----------QHSSPGWV----D-----GMGTGARLWGPNQGIFVKNEAYAGEEDEYDFY 358 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEE----------CTTCCCCB----C-----EEGGGSBCSSEEEEEEEECGGGTTSSCCEEEE
T ss_pred EEEeCCCCCcccCcEEEEEe----------cCCCCccC----C-----CcccceEEcCCccEEEEccccccccCCCCcEE
Confidence 9987652 2211 11111 00000000 0 0000111234567888 6777777
Q ss_pred EEEeCCCeEEEEeCCCCceeeeeccc------------------CCCeeEeeec-CCc-eEEEeeCCCcEEEeec
Q psy12697 496 LSAGVDKTTIIWDAASGQCEQQFSFH------------------SAPALDVDWQ-SNT-SFASCSTDQHIHVCKL 550 (602)
Q Consensus 496 ~s~~~dg~i~iwd~~~~~~~~~~~~~------------------~~~v~~~~~s-~~~-~l~~~~~d~~i~iw~~ 550 (602)
++-...+.|+.++. +|... ++.+. -.....+++. +++ .+++-...+.|+.+++
T Consensus 359 vaD~~n~~I~~~~~-~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 359 FCDRDSHTVRVLTP-EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEETTTTEEEEECT-TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEECCCCEEEEECC-CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 77777788999985 45433 22221 0124567777 555 4444444566666654
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.32 E-value=0.0024 Score=61.54 Aligned_cols=244 Identities=11% Similarity=0.012 Sum_probs=143.7
Q ss_pred CEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEE-eCCCeEEEEcCCCc-
Q psy12697 235 DFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATG-SYDGYARIWTSDGS- 312 (602)
Q Consensus 235 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~~~~~~- 312 (602)
.+|+.+. ...|+..++...... .. ......+..++|++.+..|+.. ...+.|..+++++.
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~------~~-----------~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~ 145 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYT------SL-----------IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAH 145 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCE------EE-----------ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC----
T ss_pred ceeEEec-cceeEEEccCCccee------Ee-----------ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCC
Confidence 3444443 367888887654321 00 1123568899999866655555 45678888888752
Q ss_pred ----ceeecccccCCeEEEEEccCCCEEE-EEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccC-CCeEEEee--CCC
Q psy12697 313 ----LKSTLGQHKGPIFALKWNKRGNYIL-SAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQS-NTSFASCS--TDQ 384 (602)
Q Consensus 313 ----~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~ 384 (602)
..............+++.+.+..|+ +-...+.|.+.++........+.........++..| ++.++... ..+
T Consensus 146 ~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~ 225 (400)
T 3p5b_L 146 GVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPA 225 (400)
T ss_dssp --CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSC
T ss_pred CCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCC
Confidence 2223333445678899988555454 445578899999876554444443444567788876 45554444 247
Q ss_pred eEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEE-CCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCC
Q psy12697 385 HIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCS-DDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSN 463 (602)
Q Consensus 385 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 463 (602)
.|...++............-.....|+++|++..|..+. ..+.|..+|++...........
T Consensus 226 ~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~------------------ 287 (400)
T 3p5b_L 226 KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE------------------ 287 (400)
T ss_dssp CEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECS------------------
T ss_pred EEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCC------------------
Confidence 888888876544443343445789999999877777665 4578999987643221111100
Q ss_pred CCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEee
Q psy12697 464 PNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVD 529 (602)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 529 (602)
........+++. .+.++++-...+.|..+|..+|+.+..+.........+.
T Consensus 288 --------------~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 288 --------------KRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV 338 (400)
T ss_dssp --------------STTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEE
T ss_pred --------------CCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEE
Confidence 011122344442 334555555677899999888877766654433344444
No 287
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.31 E-value=0.0022 Score=59.65 Aligned_cols=206 Identities=10% Similarity=-0.019 Sum_probs=122.4
Q ss_pred CceeEEeeCCCCCeEEEE-eCCCeEEEEcCCC----cceee-cccccCCeEEEEEccCCCEEE-EEecCCcEEEEeCCCC
Q psy12697 281 KDVTSLDWNNNGSFLATG-SYDGYARIWTSDG----SLKST-LGQHKGPIFALKWNKRGNYIL-SAGVDKTTIIWDAASG 353 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~-~~dg~i~i~~~~~----~~~~~-~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~ 353 (602)
.....++|++.+..|+.+ ..++.|..++.++ ..... +.........+++.+.+..|+ +-...+.|.+.+....
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 557899999866555544 4568999999876 22222 222224557889987555554 4456788999998754
Q ss_pred ceeEEeeeccCCeeeeeccC-CCeEEEeeC-C-CeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEE-CCCeEE
Q psy12697 354 QCEQQFSFHSAPALDVDWQS-NTSFASCST-D-QHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCS-DDMTLK 429 (602)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~-~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~ 429 (602)
...............++..| ++.++.+.. . +.|..+++............-.....++++|++..|..+. ..+.|.
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~ 189 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 189 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEE
Confidence 43333333334567788876 455544443 2 6888888764433222223345688999999877776665 457899
Q ss_pred EEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeC
Q psy12697 430 IWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA 509 (602)
Q Consensus 430 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~ 509 (602)
.+|++.. ....+.... ........+++. .+.++++-...+.|..+|.
T Consensus 190 ~~d~dg~-~~~~~~~~~-------------------------------~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 190 SIDVNGG-NRKTILEDE-------------------------------KRLAHPFSLAVF-EDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp EEETTSC-SCEEEEECT-------------------------------TTTSSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred EEecCCC-ceEEEeecC-------------------------------CccCCcEEEEEE-CCEEEEEECCCCeEEEEeC
Confidence 9998642 222211000 011223455553 3455556666788999998
Q ss_pred CCCceeeeec
Q psy12697 510 ASGQCEQQFS 519 (602)
Q Consensus 510 ~~~~~~~~~~ 519 (602)
.+++.+..+.
T Consensus 237 ~~g~~~~~i~ 246 (316)
T 1ijq_A 237 LTGSDVNLLA 246 (316)
T ss_dssp TTCCCCEEEE
T ss_pred CCCcceEEEe
Confidence 7777665554
No 288
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.31 E-value=0.0081 Score=65.94 Aligned_cols=186 Identities=14% Similarity=0.191 Sum_probs=95.0
Q ss_pred CcceEEEEEcCC------CCEEEEeeC-CCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCe
Q psy12697 222 ESEVFICAWNPV------KDFLASGSG-DSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSF 294 (602)
Q Consensus 222 ~~~v~~~~~~~~------~~~l~s~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 294 (602)
...|.|+++.|. +++++.|.. |++++|+++.+.+.. ..... ..... ...+.-+.+ ....+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~--------~~~~L--~~~~~--p~si~l~~~-~~~~~ 619 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL--------HKEML--GGEII--PRSILMTTF-ESSHY 619 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE--------EEEEC--CSSCC--EEEEEEEEE-TTEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE--------EEEEC--CCCCC--CcEEEEEEe-CCCcE
Confidence 446888888763 368999996 999999999753221 11110 00000 112323333 23467
Q ss_pred EEEEeCCCeEEEEcCC---Ccceee--cccccCCeEEEEEccCCCE-EEEEecCCcEEEEeCCCCceeEEeeeccCCeee
Q psy12697 295 LATGSYDGYARIWTSD---GSLKST--LGQHKGPIFALKWNKRGNY-ILSAGVDKTTIIWDAASGQCEQQFSFHSAPALD 368 (602)
Q Consensus 295 l~~~~~dg~i~i~~~~---~~~~~~--~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~ 368 (602)
|.+|-.||.+..+.++ +.+... ..-...++.-..+...+.. +++.+ +....++.-+ ++... .......+..
T Consensus 620 L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~-~~l~~-s~l~~~~v~~ 696 (1158)
T 3ei3_A 620 LLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACS-DRPTVIYSSN-HKLVF-SNVNLKEVNY 696 (1158)
T ss_dssp EEEEETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEES-SSCEEEEESS-SSEEE-EEBSSSCCCE
T ss_pred EEEEeCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEEC-CCCEEEEEcC-CceEE-eccChHHhce
Confidence 8899999988766543 332211 1111334444444444433 34443 4444444433 22211 1112222222
Q ss_pred e-eccCC---CeEEEeeCCCeEEEEEcCCCc--eeeEeccCCCCeEEEEECCCCCEEEEEECC
Q psy12697 369 V-DWQSN---TSFASCSTDQHIHVCKLHSDK--PVKSFEGHTNEVNAIKWDPQGLLLASCSDD 425 (602)
Q Consensus 369 ~-~~~~~---~~~~~~~~~~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 425 (602)
+ .|+.. +.++.. .++.++|..+.... .++++. -...+..++++|+.+.++.+..+
T Consensus 697 ~~~F~se~~~~g~v~~-~~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~ 757 (1158)
T 3ei3_A 697 MCPLNSDGYPDSLALA-NNSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSR 757 (1158)
T ss_dssp EEEECCSSSTTEEEEE-CSSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEE
T ss_pred EeccCcccCCCcEEEE-cCCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEe
Confidence 2 23221 234433 34568888875433 223333 23568999999988877766543
No 289
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.27 E-value=0.00072 Score=65.91 Aligned_cols=242 Identities=10% Similarity=0.091 Sum_probs=135.0
Q ss_pred CeEEEEEccC--CCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCC-----eEEEEEcCCCc
Q psy12697 323 PIFALKWNKR--GNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQ-----HIHVCKLHSDK 395 (602)
Q Consensus 323 ~i~~~~~~~~--~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~i~d~~~~~ 395 (602)
....++|+|+ ...|+.+...+.|+.+|..++...... ........+++.+++.++++...+ .+...+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 4568999984 445666655588999999877665443 344557888888887766665432 23333332221
Q ss_pred e-eeEeccCCCCeEEEEECC-CCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeee
Q psy12697 396 P-VKSFEGHTNEVNAIKWDP-QGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILK 473 (602)
Q Consensus 396 ~-~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 473 (602)
. ...+. .......++++| +|.+.++-..++.|+.+|..++.....+....
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~--------------------------- 270 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD--------------------------- 270 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS---------------------------
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC---------------------------
Confidence 1 01111 234456788999 67666666667889999987665422221000
Q ss_pred eccCCccCCeEEEEEccCCCEEEEE-eCCCeEEEEeCC--CCcee--eeeccc---------------CCCeeEeee---
Q psy12697 474 STLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAA--SGQCE--QQFSFH---------------SAPALDVDW--- 530 (602)
Q Consensus 474 ~~~~~~~~~v~~i~~s~~~~~l~s~-~~dg~i~iwd~~--~~~~~--~~~~~~---------------~~~v~~~~~--- 530 (602)
....-..++|+|+|++|..+ ...+.|+.++.. ++... ..+.+. -.....+++
T Consensus 271 -----~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n 345 (433)
T 4hw6_A 271 -----TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKN 345 (433)
T ss_dssp -----CCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEEC
T ss_pred -----CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEcc
Confidence 01112368999999855544 456789997765 33221 122111 113556888
Q ss_pred ------cCCc-eEEEeeCCCcEEEeecCCCCceeeeecccc----cceEEEEe---cCCcEEEEEEC-CCCCeEEEeccC
Q psy12697 531 ------QSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTT----GQLVHSYK---GTGGIFEVCWN-SRGDKVGASASD 595 (602)
Q Consensus 531 ------s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~i~~l~~s-pdg~~l~~~~~d 595 (602)
.+++ .+++-...+.|+.++. ++ .+.++.+... |..--... .-.....|+++ ++|.++++-..+
T Consensus 346 ~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n 423 (433)
T 4hw6_A 346 EAYAGEEDEYDFYFCDRDSHTVRVLTP-EG-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDN 423 (433)
T ss_dssp GGGTTSSCCEEEEEEETTTTEEEEECT-TS-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred ccccccCCCCcEEEEECCCCEEEEECC-CC-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCC
Confidence 6777 5555556678888874 33 3333333211 00000000 01236789999 566655555556
Q ss_pred CeEEe
Q psy12697 596 GSVFK 600 (602)
Q Consensus 596 g~v~i 600 (602)
+.|+.
T Consensus 424 ~rIr~ 428 (433)
T 4hw6_A 424 HRVRK 428 (433)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 66653
No 290
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.26 E-value=0.00044 Score=67.44 Aligned_cols=154 Identities=14% Similarity=0.092 Sum_probs=94.3
Q ss_pred ceEEEEECC-CCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeC
Q psy12697 142 PVYSVAFSP-DGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIG 220 (602)
Q Consensus 142 ~V~~~~~s~-d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 220 (602)
....++++| ++..|..+...+.|+.+|+.++..... ..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~-----------------------------------------~~ 176 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTV-----------------------------------------YS 176 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEE-----------------------------------------EC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEE-----------------------------------------ec
Confidence 457889998 455566665558888888877654321 11
Q ss_pred CCcceEEEEEcCCCCEEEEeeC-CC---cEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCC-CCCeE
Q psy12697 221 HESEVFICAWNPVKDFLASGSG-DS---TARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNN-NGSFL 295 (602)
Q Consensus 221 h~~~v~~~~~~~~~~~l~s~~~-dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l 295 (602)
.......++|++++++|+.+.. ++ ...+|-...+..... . ... .......++++| ++.++
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~---~-~l~-----------~~~~p~giavdp~~g~ly 241 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVI---T-ELT-----------KGQNCNGAETHPINGELY 241 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSE---E-EEE-----------ECSSCCCEEECTTTCCEE
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeee---e-eec-----------cCCCceEEEEeCCCCEEE
Confidence 3445778999999986665544 22 122222222222110 0 110 023467888999 67766
Q ss_pred EEEeCCCeEEEEcCCCcceeecc--cccCCeEEEEEccCCCEEEEE-ecCCcEEEEeCC
Q psy12697 296 ATGSYDGYARIWTSDGSLKSTLG--QHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAA 351 (602)
Q Consensus 296 ~~~~~dg~i~i~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~wd~~ 351 (602)
++-..++.|..++.++.....+. ........++|+|++++|+.+ ...+.|..++..
T Consensus 242 v~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 242 FNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 66667789999998865442221 122346789999999965554 456788887754
No 291
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.26 E-value=0.0013 Score=61.08 Aligned_cols=204 Identities=8% Similarity=-0.026 Sum_probs=121.1
Q ss_pred ceeEEeeCCCCCeE-EEEeCCCeEEEEcCCCcce--eecccccCCeEEEEEccCCCEEE-EEecCCcEEEEeCCCCceeE
Q psy12697 282 DVTSLDWNNNGSFL-ATGSYDGYARIWTSDGSLK--STLGQHKGPIFALKWNKRGNYIL-SAGVDKTTIIWDAASGQCEQ 357 (602)
Q Consensus 282 ~i~~~~~~~~~~~l-~~~~~dg~i~i~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~ 357 (602)
...+++|.+.+..| .+-...+.|..++.++... ......-.....+++.+.+..|+ +-...+.|.++++.......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 46789999855444 4445568899998876531 22222224566788887555454 44556789999987543333
Q ss_pred EeeeccCCeeeeeccCC-CeEEEee--CCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEE-CCCeEEEEeC
Q psy12697 358 QFSFHSAPALDVDWQSN-TSFASCS--TDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCS-DDMTLKIWSL 433 (602)
Q Consensus 358 ~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~ 433 (602)
...........++..|. +.++... ..+.|...++............-.....++++|++..|..+. ..+.|..+|+
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 33233345667777763 5555544 357888888765433222333345678999999776666654 4678999987
Q ss_pred CCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCc
Q psy12697 434 DKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ 513 (602)
Q Consensus 434 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~ 513 (602)
+........... ......+++. .+.++.+-...+.|..+|..+|+
T Consensus 196 dG~~~~~~~~~~----------------------------------~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 196 DGTNRQAVVKGS----------------------------------LPHPFALTLF-EDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp TSCSCEEEECSC----------------------------------CSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCceEEEecCC----------------------------------CCCceEEEEe-CCEEEEEecCCCeEEEEECCCCC
Confidence 642211111111 1122344443 23445555567889999988887
Q ss_pred eeeeecc
Q psy12697 514 CEQQFSF 520 (602)
Q Consensus 514 ~~~~~~~ 520 (602)
....+..
T Consensus 241 ~~~~i~~ 247 (318)
T 3sov_A 241 GLREIHS 247 (318)
T ss_dssp SCEEEEC
T ss_pred ceEEEeC
Confidence 6665543
No 292
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.24 E-value=0.012 Score=64.73 Aligned_cols=382 Identities=10% Similarity=0.067 Sum_probs=183.7
Q ss_pred cceeeeecccceeeeee-eccCCceEEEEECCC------CCeEEEeeC-CceEEEEecCCceeEEEeeccCceEEEEeCC
Q psy12697 120 LTLPLWDVERGECLNTL-TRHTEPVYSVAFSPD------GKFLASGSF-DKCVHIWSARTGQLVHSYKGTGGIFEVCWNS 191 (602)
Q Consensus 120 ~~i~vwd~~~~~~~~~l-~~h~~~V~~~~~s~d------~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 191 (602)
+.+.++++..++..... ..-...|.|+++.|. ++++|.|.. |++|+|+++.+.+.+........
T Consensus 532 ~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~-------- 603 (1158)
T 3ei3_A 532 RALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGE-------- 603 (1158)
T ss_dssp TEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSS--------
T ss_pred CEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCC--------
Confidence 34556666554322111 123568999999873 469999996 99999999987666543221100
Q ss_pred CCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEec
Q psy12697 192 RGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCIS 271 (602)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~ 271 (602)
.-...|.-+.+ ....+|..|-.||.+.-+.++.... .+.......
T Consensus 604 ----------------------------~~p~si~l~~~-~~~~~L~igl~dG~l~~~~~d~~tg----~l~d~r~~~-- 648 (1158)
T 3ei3_A 604 ----------------------------IIPRSILMTTF-ESSHYLLCALGDGALFYFGLNIETG----LLSDRKKVT-- 648 (1158)
T ss_dssp ----------------------------CCEEEEEEEEE-TTEEEEEEEETTSEEEEEEECTTTC----CEEEEEEEE--
T ss_pred ----------------------------CCCcEEEEEEe-CCCcEEEEEeCCCeEEEEEEcCCCC----ccccceeEE--
Confidence 00111222233 2346888999999987776653211 011111111
Q ss_pred CCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCCeE-EEEEccC--CCEEEEEecCCcEEEE
Q psy12697 272 KGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIF-ALKWNKR--GNYILSAGVDKTTIIW 348 (602)
Q Consensus 272 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~-~~~~~~~--~~~l~~~~~dg~i~~w 348 (602)
.+ ..++.-..+...+..-+.+..+....++..++.....-. ....+. ...|+.. .+-++..+ ++.++|.
T Consensus 649 LG------~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l-~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~ 720 (1158)
T 3ei3_A 649 LG------TQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNV-NLKEVNYMCPLNSDGYPDSLALAN-NSTLTIG 720 (1158)
T ss_dssp CC------SSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEB-SSSCCCEEEEECCSSSTTEEEEEC-SSCEEEE
T ss_pred cC------CCceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEecc-ChHHhceEeccCcccCCCcEEEEc-CCceEEE
Confidence 00 123333333333333333333444444443443322211 112232 3334322 23355444 4558877
Q ss_pred eCCCCce--eEEeeeccCCeeeeeccCCC-eEEEee--------------------------------------------
Q psy12697 349 DAASGQC--EQQFSFHSAPALDVDWQSNT-SFASCS-------------------------------------------- 381 (602)
Q Consensus 349 d~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------------------------------------- 381 (602)
.+..... .+.+.. ...+..++++|.. .++++.
T Consensus 721 ~i~~~~~~~~~~ipL-~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1158)
T 3ei3_A 721 TIDEIQKLHIRTVPL-YESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETS 799 (1158)
T ss_dssp EECCSSSEEEEEEEC-SSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------
T ss_pred EecccCCeeEEEEeC-CCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhh
Confidence 6643322 122222 1234444444432 222111
Q ss_pred -----CCCeEEEEEcCCCceeeEeccCC-CCeEEEE---ECCC-CCEEEEEE----------CCCeEEEEeCCCCeeeEe
Q psy12697 382 -----TDQHIHVCKLHSDKPVKSFEGHT-NEVNAIK---WDPQ-GLLLASCS----------DDMTLKIWSLDKDNCVHD 441 (602)
Q Consensus 382 -----~~~~i~i~d~~~~~~~~~~~~~~-~~i~~~~---~~~~-~~~l~~~~----------~dg~i~iwd~~~~~~~~~ 441 (602)
..+.|++.|..+.+.+..+.-.. ..+.+++ |..+ ..+|++|. ..|.|.+|++..++....
T Consensus 800 ~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv 879 (1158)
T 3ei3_A 800 FGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTV 879 (1158)
T ss_dssp CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEE
T ss_pred cCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEE
Confidence 11346777777776655544322 2344444 3322 46788876 246777777753221111
Q ss_pred eccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceee-eecc
Q psy12697 442 LQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQ-QFSF 520 (602)
Q Consensus 442 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~ 520 (602)
.+ ...++++++++-- +|+++++. ..+|++|++...+.+. ....
T Consensus 880 ~~---------------------------------~~v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~~~~L~~~~~~ 923 (1158)
T 3ei3_A 880 AE---------------------------------KEVKGAVYSMVEF-NGKLLASI--NSTVRLYEWTTEKELRTECNH 923 (1158)
T ss_dssp EE---------------------------------EEESSCEEEEEEE-TTEEEEEE--TTEEEEEEECTTSCEEEEEEE
T ss_pred EE---------------------------------EEcCCcCEEEeee-CCEEEEEc--CCEEEEEECCCCceEEEEeec
Confidence 00 0124455555432 45444433 5789999998665443 1111
Q ss_pred cCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCC-ceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEeccCCeE
Q psy12697 521 HSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDK-PVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSV 598 (602)
Q Consensus 521 ~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~~dg~v 598 (602)
+ ..+..+.....+ ++++|..-..|.++..+... .+..+.... ....++++.|--+ ..++.+..+|.+
T Consensus 924 ~-~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~---------~~~~vta~~~ld~-~t~l~aD~~gNl 992 (1158)
T 3ei3_A 924 Y-NNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDF---------NPNWMSAVEILDD-DNFLGAENAFNL 992 (1158)
T ss_dssp C-CCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECC---------SCBCEEEEEEEET-TEEEEEETTSEE
T ss_pred c-ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeec---------ccccEEEEEEEcc-CcEEEEcCCCcE
Confidence 1 123322232234 88888888888776643221 111111110 1244677777544 466778888887
Q ss_pred Ee
Q psy12697 599 FK 600 (602)
Q Consensus 599 ~i 600 (602)
.+
T Consensus 993 ~v 994 (1158)
T 3ei3_A 993 FV 994 (1158)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 293
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.14 E-value=0.0037 Score=65.51 Aligned_cols=226 Identities=12% Similarity=0.017 Sum_probs=132.8
Q ss_pred CCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEE-ecCCcEEEEeCCCC----ceeEEeeeccCCeeee--ecc
Q psy12697 300 YDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAASG----QCEQQFSFHSAPALDV--DWQ 372 (602)
Q Consensus 300 ~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~----~~~~~~~~~~~~~~~~--~~~ 372 (602)
....|+..++.+.....+......+..++|.+....|+.+ ...+.|+.+++... .....+.........+ .|.
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 481 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred cccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec
Confidence 3456777887765554454556678899999866666544 44677888887653 2222222122233344 444
Q ss_pred CCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEEC-C-CeEEEEeCCCCeeeEeeccccccEE
Q psy12697 373 SNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSD-D-MTLKIWSLDKDNCVHDLQAHNKEIY 450 (602)
Q Consensus 373 ~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~~~~~~~~~~~i~ 450 (602)
.+..+++-...+.|.+.++........+.........|+++|.+.+|+.... + +.|...++........+..
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~------ 555 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE------ 555 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS------
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC------
Confidence 4456667677889999999866544444444556899999997666666553 2 6788777754322111111
Q ss_pred EEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe-CCCeEEEEeCCCCceeeeeccc--CCCeeE
Q psy12697 451 TIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAASGQCEQQFSFH--SAPALD 527 (602)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~--~~~v~~ 527 (602)
.-.....|++++.+..|+.+. ..+.|...++........+... -.....
T Consensus 556 ----------------------------~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~g 607 (791)
T 3m0c_C 556 ----------------------------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFS 607 (791)
T ss_dssp ----------------------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEE
T ss_pred ----------------------------CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCE
Confidence 123456778886666665554 4568999998644433333321 123456
Q ss_pred eeecCCceEEEeeCCCcEEEeecCCCCceeee
Q psy12697 528 VDWQSNTSFASCSTDQHIHVCKLHSDKPVKSF 559 (602)
Q Consensus 528 ~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 559 (602)
|++..+..+++-...+.|...+..+++.+..+
T Consensus 608 lav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 608 LAVFEDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEeCCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 66654434445556677888887777655444
No 294
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.03 E-value=0.0021 Score=59.20 Aligned_cols=191 Identities=12% Similarity=0.194 Sum_probs=121.1
Q ss_pred CCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCe-------EE--EeeC--CCeEEEEEcC-CCceeeE
Q psy12697 332 RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-------FA--SCST--DQHIHVCKLH-SDKPVKS 399 (602)
Q Consensus 332 ~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~--~~~i~i~d~~-~~~~~~~ 399 (602)
....++.....+-+.+||+ +|+.++.+.. ..+..+...++-. ++ +.-. +++|.+|++. ....+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 4456776777889999999 8888887754 4455555544321 33 3333 5789999774 2223444
Q ss_pred ecc------CC-CCeEEEEE--CCC-CC-EEEEEECCCeEEEEeCC---CC----eeeEeeccccccEEEEEECCCCCCC
Q psy12697 400 FEG------HT-NEVNAIKW--DPQ-GL-LLASCSDDMTLKIWSLD---KD----NCVHDLQAHNKEIYTIKWSPTGPET 461 (602)
Q Consensus 400 ~~~------~~-~~i~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~---~~----~~~~~~~~~~~~i~~~~~~~~~~~~ 461 (602)
+.. .. ..+..+|+ +|. ++ ++++...+|.+..|++. .+ +.++++..
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l----------------- 178 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM----------------- 178 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-----------------
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-----------------
Confidence 421 11 55777888 774 44 68888889999999883 22 33333322
Q ss_pred CCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCC-----CCceeeeec-cc-CCCeeEeee--cC
Q psy12697 462 SNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA-----SGQCEQQFS-FH-SAPALDVDW--QS 532 (602)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~-----~~~~~~~~~-~~-~~~v~~~~~--s~ 532 (602)
.+.+..+...+....|..+-++.-|..++.+ +++.+..+. ++ ...+..+++ .+
T Consensus 179 ------------------gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~ 240 (355)
T 3amr_A 179 ------------------NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAA 240 (355)
T ss_dssp ------------------SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECG
T ss_pred ------------------CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecC
Confidence 1345677777778889999998777777755 344555442 12 235777777 45
Q ss_pred Cc--eEEEee-CCCcEEEeecC-CCCceeeee
Q psy12697 533 NT--SFASCS-TDQHIHVCKLH-SDKPVKSFE 560 (602)
Q Consensus 533 ~~--~l~~~~-~d~~i~iw~~~-~~~~~~~~~ 560 (602)
++ +|++++ .++++.+||.. +.+.+..+.
T Consensus 241 ~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 241 DGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp GGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 44 455444 67899999996 566666664
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.01 E-value=7e-05 Score=77.96 Aligned_cols=227 Identities=12% Similarity=0.015 Sum_probs=127.5
Q ss_pred CCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEe-cCCcEEEEeCCC----CceeEEeeeccCCeeeeecc--
Q psy12697 300 YDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAAS----GQCEQQFSFHSAPALDVDWQ-- 372 (602)
Q Consensus 300 ~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~wd~~~----~~~~~~~~~~~~~~~~~~~~-- 372 (602)
..+.|+..++.+.....+......+..++|.+.+..|+.+. ..+.|..+++.. ......+.........+++.
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 34567788877655444444445677899998777776654 457888888875 22221121111223344444
Q ss_pred CCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEEC-C-CeEEEEeCCCCeeeEeeccccccEE
Q psy12697 373 SNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSD-D-MTLKIWSLDKDNCVHDLQAHNKEIY 450 (602)
Q Consensus 373 ~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~~~~~~~~~~~i~ 450 (602)
.+..+++-...+.|.++++........+.........++++|.+.+|+.+.. . +.|..+++.... ...+..
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~------ 536 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVT------ 536 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESC------
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEe------
Confidence 3444555556788999998765544333333345678899996655554432 2 566666654321 111100
Q ss_pred EEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEE-EEeCCCeEEEEeCCCCceeeeecc--cCCCeeE
Q psy12697 451 TIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYIL-SAGVDKTTIIWDAASGQCEQQFSF--HSAPALD 527 (602)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~ 527 (602)
..-.....|+|+|++..|. +-...+.|.++|+........+.. .......
T Consensus 537 ---------------------------~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~g 589 (699)
T 1n7d_A 537 ---------------------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFS 589 (699)
T ss_dssp ---------------------------SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCC
T ss_pred ---------------------------CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceE
Confidence 0112345688888755554 445567899999874332222221 1123445
Q ss_pred eeecCCceEEEeeCCCcEEEeecCCCCceeeee
Q psy12697 528 VDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE 560 (602)
Q Consensus 528 ~~~s~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 560 (602)
+++..+..+++....+.|..++..+++.+..+.
T Consensus 590 lavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 590 LAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp CEEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred eEEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 666555555566677889999877766555543
No 296
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.00 E-value=0.02 Score=58.60 Aligned_cols=310 Identities=9% Similarity=0.002 Sum_probs=173.1
Q ss_pred cceEEEEEcCCCCEEEEe-eCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeE-EEEeC
Q psy12697 223 SEVFICAWNPVKDFLASG-SGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFL-ATGSY 300 (602)
Q Consensus 223 ~~v~~~~~~~~~~~l~s~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~ 300 (602)
..+..++|++.+..|+.+ ..++.|..++++..... ... .. .......+++.+.+..| ++-..
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~------~v~----~~------g~~~P~GlAvD~~~~~LY~tD~~ 100 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE------HVV----EF------GLDYPEGMAVDWLGKNLYWADTG 100 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE------EEE----CS------SCSCCCEEEEETTTTEEEEEETT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE------EEE----eC------CCCCcceEEEEeCCCEEEEEECC
Confidence 457789999976665544 45788888887654221 110 00 01345678887755545 44455
Q ss_pred CCeEEEEcCCCcceeecc-cccCCeEEEEEccCCCEEEEEec--CCcEEEEeCCCCceeEEeeeccCCeeeeeccCC-Ce
Q psy12697 301 DGYARIWTSDGSLKSTLG-QHKGPIFALKWNKRGNYILSAGV--DKTTIIWDAASGQCEQQFSFHSAPALDVDWQSN-TS 376 (602)
Q Consensus 301 dg~i~i~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 376 (602)
.+.|.+.+++|.....+. ..-.....+++.|....|+.+.. .+.|...++......... ..-.....+++.+. +.
T Consensus 101 ~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~~~~~P~GlalD~~~~~ 179 (628)
T 4a0p_A 101 TNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-PNVGRANGLTIDYAKRR 179 (628)
T ss_dssp TTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSCSSEEEEEEETTTTE
T ss_pred CCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-CCCCCcceEEEccccCE
Confidence 688999999876654443 34456789999986666666553 467777777644332222 23345667777764 44
Q ss_pred EE-EeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEE-E
Q psy12697 377 FA-SCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIK-W 454 (602)
Q Consensus 377 ~~-~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~-~ 454 (602)
+. +-...+.|..+|+..... ..+.........+++.. +.++++-...+.|...|..+++....+.........+. +
T Consensus 180 LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~ 257 (628)
T 4a0p_A 180 LYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVF 257 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEE
T ss_pred EEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeee
Confidence 44 445567899999876544 33333444566888865 44445555578898888766654333322111111111 1
Q ss_pred C---------------------------------CCCCCCCCCCcc-------eeeee-----eeccC-----------C
Q psy12697 455 S---------------------------------PTGPETSNPNMS-------LIFIL-----KSTLG-----------Q 478 (602)
Q Consensus 455 ~---------------------------------~~~~~~~~~~~~-------~~~~~-----~~~~~-----------~ 478 (602)
+ |.+..+...... ..+.. ...+. .
T Consensus 258 ~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~ 337 (628)
T 4a0p_A 258 HSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILPIH 337 (628)
T ss_dssp CGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEETTEEEEECCCTTCCCCEECCCT
T ss_pred eecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeeccceEEEEecccccCceEEEEeh
Confidence 1 111111110000 00000 00000 1
Q ss_pred ccCCeEEEEEccCCCEEEEEe-CCCeEEEEeCCCCceeeeecc------cCCCeeEeeecCCc--eEEEeeCCCcEEEee
Q psy12697 479 HKGPIFALKWNKRGNYILSAG-VDKTTIIWDAASGQCEQQFSF------HSAPALDVDWQSNT--SFASCSTDQHIHVCK 549 (602)
Q Consensus 479 ~~~~v~~i~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~------~~~~v~~~~~s~~~--~l~~~~~d~~i~iw~ 549 (602)
.-..+..++|.+.++.|..+. ..+.|+.++.........+.. ....+..+++...+ .+.+-+..+.|.+.+
T Consensus 338 ~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~ 417 (628)
T 4a0p_A 338 SLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTR 417 (628)
T ss_dssp TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEE
Confidence 124467888988666655544 467788888764333233322 22357788888875 445556678888888
Q ss_pred cC
Q psy12697 550 LH 551 (602)
Q Consensus 550 ~~ 551 (602)
++
T Consensus 418 ~~ 419 (628)
T 4a0p_A 418 LD 419 (628)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 297
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.99 E-value=0.0048 Score=56.78 Aligned_cols=193 Identities=15% Similarity=0.198 Sum_probs=121.3
Q ss_pred CCCeEEEEeCCCeEEEEcCCCcceeecccccCCeEEEEEccC----CCE--EE-EEe-c--CCcEEEEeC--CCCceeEE
Q psy12697 291 NGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKR----GNY--IL-SAG-V--DKTTIIWDA--ASGQCEQQ 358 (602)
Q Consensus 291 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~--l~-~~~-~--dg~i~~wd~--~~~~~~~~ 358 (602)
...+++.....+-+.+||++|+.+..+.. +.++.+..-|+ |+. ++ +.. . +++|.+|++ .+++ +..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 34566666777899999999999888754 56777766653 222 33 333 3 578999966 3443 443
Q ss_pred eee------cc-CCeeeeec--cCC-C--eEEEeeCCCeEEEEEcC-------CCceeeEeccCCCCeEEEEECCCCCEE
Q psy12697 359 FSF------HS-APALDVDW--QSN-T--SFASCSTDQHIHVCKLH-------SDKPVKSFEGHTNEVNAIKWDPQGLLL 419 (602)
Q Consensus 359 ~~~------~~-~~~~~~~~--~~~-~--~~~~~~~~~~i~i~d~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l 419 (602)
+.. .. ..+..++. ++. + .+++...+|.+..|++. +.+.++++.. .+.+..+..++....|
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRL 194 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeE
Confidence 311 11 34455555 553 3 36777788999999883 2355666664 3578899999988999
Q ss_pred EEEECCCeEEEEeCCC-----CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEE--ccCC
Q psy12697 420 ASCSDDMTLKIWSLDK-----DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKW--NKRG 492 (602)
Q Consensus 420 ~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~--s~~~ 492 (602)
+.+-++.-|..++.+. ++.+..+.. ..-...+..|++ .+++
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~--------------------------------g~l~aDvEGLai~~~~~g 242 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADG--------------------------------RHLTRDIEGLTIYYAADG 242 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSS--------------------------------SSBCSCEEEEEEEECGGG
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecC--------------------------------CccccCcceEEEEecCCC
Confidence 9999986666666441 222222210 011224555655 4455
Q ss_pred C-EEEEEe-CCCeEEEEeCC-CCceeeeec
Q psy12697 493 N-YILSAG-VDKTTIIWDAA-SGQCEQQFS 519 (602)
Q Consensus 493 ~-~l~s~~-~dg~i~iwd~~-~~~~~~~~~ 519 (602)
+ ||++++ .+.+..+||.. +.+.+..|.
T Consensus 243 ~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 243 KGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp CEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred CEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 5 666666 56799999996 677777664
No 298
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.97 E-value=0.012 Score=55.54 Aligned_cols=234 Identities=15% Similarity=0.177 Sum_probs=118.0
Q ss_pred CceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeC
Q psy12697 141 EPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIG 220 (602)
Q Consensus 141 ~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 220 (602)
.....++|.|||+++++ ..++.|.+++ +++.. .+... .....
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~-~~~~~----------------------------------~v~~~ 72 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLS-TYAEL----------------------------------SVYHR 72 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEE-EEEEC----------------------------------CCCCS
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCcc-Eeecc----------------------------------eEeec
Confidence 45679999999996555 5669999988 44321 11000 00011
Q ss_pred CCcceEEEEEcCC---CCEEEEeeC-C-----CcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCC
Q psy12697 221 HESEVFICAWNPV---KDFLASGSG-D-----STARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNN 291 (602)
Q Consensus 221 h~~~v~~~~~~~~---~~~l~s~~~-d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 291 (602)
.......++|+|+ +..|+.+.. . +.|..++...... ......... ..... ........++|.|+
T Consensus 73 g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~---~~~~~l~~~-~p~~~---~~~h~~~~l~~~pd 145 (352)
T 2ism_A 73 GESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERG---VLDRVVLDG-IPARP---HGLHSGGRIAFGPD 145 (352)
T ss_dssp TTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCE---EEEEEEEEE-ECCCT---TCCCCCCCEEECTT
T ss_pred CCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCc---CceEEEEEe-CCCCC---CCCcCCceEEECCC
Confidence 2345788999998 555554433 2 5677777653311 011111111 11000 01122368999999
Q ss_pred CCeEEEEeC-------------CCeEEEEcCCCcce-------------eec-ccccCCeEEEEEcc-CCCEEEEEecCC
Q psy12697 292 GSFLATGSY-------------DGYARIWTSDGSLK-------------STL-GQHKGPIFALKWNK-RGNYILSAGVDK 343 (602)
Q Consensus 292 ~~~l~~~~~-------------dg~i~i~~~~~~~~-------------~~~-~~~~~~i~~~~~~~-~~~~l~~~~~dg 343 (602)
|.+.++.+. .|.|.-++.++... ..+ .++ .....++|+| +++.+++-....
T Consensus 146 G~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~ 224 (352)
T 2ism_A 146 GMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPS 224 (352)
T ss_dssp SCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC-
T ss_pred CCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCC
Confidence 976665432 25677777665211 111 112 2356788999 565444432222
Q ss_pred c--------EEEEeCCCCc------------------eeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCce-
Q psy12697 344 T--------TIIWDAASGQ------------------CEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKP- 396 (602)
Q Consensus 344 ~--------i~~wd~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~- 396 (602)
. |.+. ..+. ....+ ........+++..+..+++....+.|...++.....
T Consensus 225 ~~~~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~ 301 (352)
T 2ism_A 225 GEQGYGHDEVNLI--VPGGNYGWPRVVGRGNDPRYRDPLYFW-PQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGR 301 (352)
T ss_dssp -----CCCEEEEE--CTTCBCCTTTCCSCCCCTTSCCCSEEC-TTCCCEEEEEEETTEEEEEETTTTEEEEEEEEEETTE
T ss_pred CCCCCCCeEEEEe--ccCCcCCCCcccCCCCCCCCcCCeEec-CCCCCCcceEEECCEEEEEECCCCEEEEEEECCCCcc
Confidence 2 3332 2221 11111 111223445554444444444566777777654331
Q ss_pred -----eeEeccCCCCeEEEEECCCCCEEEEEE
Q psy12697 397 -----VKSFEGHTNEVNAIKWDPQGLLLASCS 423 (602)
Q Consensus 397 -----~~~~~~~~~~i~~~~~~~~~~~l~~~~ 423 (602)
...+......+..+++.|||.++++..
T Consensus 302 ~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 302 WRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred eeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 122222335789999999998776654
No 299
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.95 E-value=0.01 Score=53.50 Aligned_cols=260 Identities=11% Similarity=0.117 Sum_probs=158.9
Q ss_pred cceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCC
Q psy12697 120 LTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPP 199 (602)
Q Consensus 120 ~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (602)
.+|.|.|+..+..+.+-.-. -.+.-.+|..+.||--. ..++.|+|+++.+.+..+....
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~---AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e----------------- 107 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD----------------- 107 (365)
T ss_dssp EEEEEEETTSTTSCEEEECC---CSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-----------------
T ss_pred CEEEEEECCCCCCccccccc---cceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC-----------------
Confidence 47888999876554222111 11334588888777665 7889999999999988776443
Q ss_pred CCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCC
Q psy12697 200 ESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPS 279 (602)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (602)
.|.--.|-.+. .|+..+ +..|.-|++..... +.....++. .. .
T Consensus 108 ------------------------~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~----P~kvFdR~~-----~L--~ 150 (365)
T 2xzh_A 108 ------------------------DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQ----PVKMFDRHS-----SL--A 150 (365)
T ss_dssp ------------------------CEEEEEECSSS-EEEEEE-SSEEEEEESSTTCC----CEEEEECCG-----GG--T
T ss_pred ------------------------ccEEEEecCCC-eEEEEc-CCcEEEEcccCCCC----Cceeeecch-----hc--c
Confidence 34444554333 343333 35699999876321 111111111 11 1
Q ss_pred CCceeEEeeCCCCCeEEEEeC-------CCeEEEEcCCCcceeecccccCCeEEEEEccC---CCEEEEEec---CCcEE
Q psy12697 280 NKDVTSLDWNNNGSFLATGSY-------DGYARIWTSDGSLKSTLGQHKGPIFALKWNKR---GNYILSAGV---DKTTI 346 (602)
Q Consensus 280 ~~~i~~~~~~~~~~~l~~~~~-------dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~---dg~i~ 346 (602)
...|..-..+++.++++..+- .|.+.+|..+.+..+.+.+|......+.+..+ .+.++.+.. .+.+.
T Consensus 151 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 230 (365)
T 2xzh_A 151 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 230 (365)
T ss_dssp TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEE
T ss_pred cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 467888888999998776542 37899999999888899998876655544321 123333332 25788
Q ss_pred EEeCCCC---ce-----eEEeeec----cCCeeeeeccC-CCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEEC
Q psy12697 347 IWDAASG---QC-----EQQFSFH----SAPALDVDWQS-NTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWD 413 (602)
Q Consensus 347 ~wd~~~~---~~-----~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 413 (602)
+.++... .. ...+... .+-..++..++ .+.+...+.-|.+++||+.++.++..-+-..+.|...+.+
T Consensus 231 IiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~ 310 (365)
T 2xzh_A 231 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPH 310 (365)
T ss_dssp EEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE
T ss_pred EEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEeccc
Confidence 8887432 11 0111111 11223333333 3678888999999999999999988776666666655555
Q ss_pred CCCCEEEEEECCCeEEEEeCCCCe
Q psy12697 414 PQGLLLASCSDDMTLKIWSLDKDN 437 (602)
Q Consensus 414 ~~~~~l~~~~~dg~i~iwd~~~~~ 437 (602)
.+..-++.....|.|.--.++...
T Consensus 311 ~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 311 EATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp GGGTEEEEEETTCEEEEEEECTTT
T ss_pred CCCCcEEEEcCCCEEEEEEECccc
Confidence 544455555577776666555443
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.94 E-value=0.012 Score=57.50 Aligned_cols=253 Identities=9% Similarity=0.052 Sum_probs=138.7
Q ss_pred ceeEEeeCCC-CCeEE-EEeCCCeEEEEcCCCcceeecccc----cCCeEEEEE-------ccCCCEEEEEecCC-----
Q psy12697 282 DVTSLDWNNN-GSFLA-TGSYDGYARIWTSDGSLKSTLGQH----KGPIFALKW-------NKRGNYILSAGVDK----- 343 (602)
Q Consensus 282 ~i~~~~~~~~-~~~l~-~~~~dg~i~i~~~~~~~~~~~~~~----~~~i~~~~~-------~~~~~~l~~~~~dg----- 343 (602)
....|+|+|. ...|+ +-...+.|++.|.....+..+... ......++| ++++++|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 44444 444457799999887666554322 235889999 99999777776554
Q ss_pred --cEEEEeCCC-Ccee-----EEeeeccCCeeeeeccC-CCe-EEEeeCCCeEEEEEcC-------CCce----------
Q psy12697 344 --TTIIWDAAS-GQCE-----QQFSFHSAPALDVDWQS-NTS-FASCSTDQHIHVCKLH-------SDKP---------- 396 (602)
Q Consensus 344 --~i~~wd~~~-~~~~-----~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~i~i~d~~-------~~~~---------- 396 (602)
.+.+++... +... ..+.. ......++..| ++. +++-..++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 255665333 2221 22221 22345566677 444 4555677889999987 4443
Q ss_pred -eeE-ec-cCCCCeEEEEECCCCCEEEEE-ECCCeEEEEeCCC--Ceee--EeeccccccEEEEEECCCCCCCCCCCcce
Q psy12697 397 -VKS-FE-GHTNEVNAIKWDPQGLLLASC-SDDMTLKIWSLDK--DNCV--HDLQAHNKEIYTIKWSPTGPETSNPNMSL 468 (602)
Q Consensus 397 -~~~-~~-~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~--~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 468 (602)
... +. +.......++|+|+|+.|..+ +..+.|+.++... +... ..+.+..+. -.+. ++..
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~---~G~~-DG~~-------- 366 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQ---SGYR-DDVG-------- 366 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTB---CCCB-CCBG--------
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCC---Cccc-CCcc--------
Confidence 111 11 223456899999999965555 4567888866532 2210 111111000 0000 1100
Q ss_pred eeeeeeccCCccCCeE-EEEEc-------cCCCEEEEEeCCCeEEEEeCCCCceeeeeccc-------------------
Q psy12697 469 IFILKSTLGQHKGPIF-ALKWN-------KRGNYILSAGVDKTTIIWDAASGQCEQQFSFH------------------- 521 (602)
Q Consensus 469 ~~~~~~~~~~~~~~v~-~i~~s-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------------------- 521 (602)
....-.... .++.. ++|.++++-....+|+.++ .+|. +.++.+.
T Consensus 367 -------~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~ 437 (496)
T 3kya_A 367 -------TEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDL 437 (496)
T ss_dssp -------GGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEET
T ss_pred -------cccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCc
Confidence 000111222 34443 4566666666778899998 4553 3333321
Q ss_pred -----CCCeeEeeecCC-c-eEEEeeCCCcEEEeecCCCCce
Q psy12697 522 -----SAPALDVDWQSN-T-SFASCSTDQHIHVCKLHSDKPV 556 (602)
Q Consensus 522 -----~~~v~~~~~s~~-~-~l~~~~~d~~i~iw~~~~~~~~ 556 (602)
-.....+++.++ + .+++=.....|+.++++....+
T Consensus 438 ~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 438 REVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp TTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC--
T ss_pred hhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCccc
Confidence 012567888886 6 4444455677888887665444
No 301
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.89 E-value=0.016 Score=53.85 Aligned_cols=249 Identities=14% Similarity=0.143 Sum_probs=131.1
Q ss_pred eeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCC
Q psy12697 134 NTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQS 213 (602)
Q Consensus 134 ~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (602)
..+...-...+.|+|.|||+++++--..|.|++++..+++... +... +
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~-v~~~-----------------------------~-- 72 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTE-LGEV-----------------------------P-- 72 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEEC-----------------------------T--
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEee-eccc-----------------------------C--
Confidence 3444445567899999999988777668999999876554321 1000 0
Q ss_pred cceEeeCCCcceEEEEEcCC---CCEEEEe-e--CCCcEEEEeCCCCCCC--CCccceEEEEEEecCCCcccCCCCceeE
Q psy12697 214 KATKLIGHESEVFICAWNPV---KDFLASG-S--GDSTARIWDMTDSTKK--DPKELQIVLRHCISKGGTEVPSNKDVTS 285 (602)
Q Consensus 214 ~~~~l~~h~~~v~~~~~~~~---~~~l~s~-~--~dg~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 285 (602)
............++++|+ +..|... + .++.|.-|.+...... .......+.... .. .....-..
T Consensus 73 --~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~-p~-----~~~H~g~~ 144 (347)
T 3das_A 73 --GVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGI-PK-----GVIHNGGR 144 (347)
T ss_dssp --TCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEE-CC-----CSSCCCCC
T ss_pred --ceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcC-CC-----CCCccCcc
Confidence 001123456788999985 3444432 2 3445555665543210 111112222111 11 11123567
Q ss_pred EeeCCCCCeEEEEeC-------------CCeEEEEcCCCcc--------eeec-ccccCCeEEEEEccCCCEEEEEe-cC
Q psy12697 286 LDWNNNGSFLATGSY-------------DGYARIWTSDGSL--------KSTL-GQHKGPIFALKWNKRGNYILSAG-VD 342 (602)
Q Consensus 286 ~~~~~~~~~l~~~~~-------------dg~i~i~~~~~~~--------~~~~-~~~~~~i~~~~~~~~~~~l~~~~-~d 342 (602)
|.|.|||.+.++.+. .|.|.-.+.++.. ...+ .+|. ....++|+|+|...++-. .+
T Consensus 145 l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~ 223 (347)
T 3das_A 145 IAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQD 223 (347)
T ss_dssp EEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSS
T ss_pred ccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCC
Confidence 999999987776542 3566666666541 1111 2333 356889999877554431 22
Q ss_pred CcEEEEeCCCCce------------------eEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCce----eeEe
Q psy12697 343 KTTIIWDAASGQC------------------EQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKP----VKSF 400 (602)
Q Consensus 343 g~i~~wd~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~----~~~~ 400 (602)
+.=.|--+..+.. +..+..+......+.|..+..|+.....+.|....+..... ...+
T Consensus 224 ~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l 303 (347)
T 3das_A 224 TWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFL 303 (347)
T ss_dssp SCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEES
T ss_pred CCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEEcCceeeccccCCEEEEEEecCCceecceEEee
Confidence 2122222222110 11111111234455565555555555666777666655432 2334
Q ss_pred ccCCCCeEEEEECCCCCEEEEEE
Q psy12697 401 EGHTNEVNAIKWDPQGLLLASCS 423 (602)
Q Consensus 401 ~~~~~~i~~~~~~~~~~~l~~~~ 423 (602)
.+....+..++..|||.++++.+
T Consensus 304 ~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 304 EGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp TTTSSCEEEEEEEETTEEEEEEC
T ss_pred cCCCCCccEEEECCCCcEEEEEc
Confidence 44456799999999997766654
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.86 E-value=0.0098 Score=56.14 Aligned_cols=243 Identities=12% Similarity=0.123 Sum_probs=118.2
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCCCccee--ec---ccccCCeEEEEEccC---CCEEEEEec-C-----CcEE
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKS--TL---GQHKGPIFALKWNKR---GNYILSAGV-D-----KTTI 346 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~--~~---~~~~~~i~~~~~~~~---~~~l~~~~~-d-----g~i~ 346 (602)
.....++|.|+|+++ ++...|.|.+++ ++.... .+ .........++++|+ +..|+.+.. . +.|.
T Consensus 31 ~~P~~ia~~pdG~l~-V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 31 EVPWALAFLPDGGML-IAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp SCEEEEEECTTSCEE-EEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CCceEEEEcCCCeEE-EEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 346799999999854 456679999998 543211 11 122456889999998 555555443 2 5677
Q ss_pred EEeCCCCce-----e-EEeee---ccCCeeeeeccCCCeEEEeeCC--------------CeEEEEEcCCC---------
Q psy12697 347 IWDAASGQC-----E-QQFSF---HSAPALDVDWQSNTSFASCSTD--------------QHIHVCKLHSD--------- 394 (602)
Q Consensus 347 ~wd~~~~~~-----~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~--------------~~i~i~d~~~~--------- 394 (602)
.++...+.. + ..+.. .......+.|.+++.+.++..+ |.|.-++....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 887764421 1 11221 1123457888888876665422 45666655431
Q ss_pred ----ceeeEeccCCCCeEEEEECC-CCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCccee
Q psy12697 395 ----KPVKSFEGHTNEVNAIKWDP-QGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLI 469 (602)
Q Consensus 395 ----~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 469 (602)
.......++ .....++|+| ++.++++-...+.+. + .....+..+...... -| |..... ......
T Consensus 189 ~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~--~-~~~dei~~i~~G~ny----Gw-p~~~g~-~~~~~~- 257 (352)
T 2ism_A 189 RRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQ--G-YGHDEVNLIVPGGNY----GW-PRVVGR-GNDPRY- 257 (352)
T ss_dssp CTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC---------CCCEEEEECTTCBC----CT-TTCCSC-CCCTTS-
T ss_pred CCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCC--C-CCCeEEEEeccCCcC----CC-CcccCC-CCCCCC-
Confidence 100111122 2356788999 566555443333221 1 001111111100000 00 000000 000000
Q ss_pred eeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCce------eeeecccCCCeeEeeecCCc-eEEE
Q psy12697 470 FILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQC------EQQFSFHSAPALDVDWQSNT-SFAS 538 (602)
Q Consensus 470 ~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~------~~~~~~~~~~v~~~~~s~~~-~l~~ 538 (602)
......+ .+......++| .+|+++++.-..+.|...+++.... ...+-.....+..+++.||| .+++
T Consensus 258 ~~p~~~~-~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~ 331 (352)
T 2ism_A 258 RDPLYFW-PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVT 331 (352)
T ss_dssp CCCSEEC-TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEE
T ss_pred cCCeEec-CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEE
Confidence 0000011 12234566777 4677776666677788877764431 12222223568899999999 4443
No 303
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.85 E-value=0.026 Score=55.19 Aligned_cols=247 Identities=12% Similarity=0.081 Sum_probs=133.7
Q ss_pred eEEEEECC-CCCeEEEe-eCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeC
Q psy12697 143 VYSVAFSP-DGKFLASG-SFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIG 220 (602)
Q Consensus 143 V~~~~~s~-d~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 220 (602)
...|+|+| +...|..+ ...+.|++.|+.++......... ..
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~-------------------------------------~~ 183 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNIN-------------------------------------TI 183 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCT-------------------------------------TS
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccC-------------------------------------cc
Confidence 56899998 34444444 44577888888877665322110 01
Q ss_pred CCcceEEEEE-------cCCCCEEEEeeCCC-c------EEEEeCCC-CCCCCCccceEEEEEEecCCCcccCCCCceeE
Q psy12697 221 HESEVFICAW-------NPVKDFLASGSGDS-T------ARIWDMTD-STKKDPKELQIVLRHCISKGGTEVPSNKDVTS 285 (602)
Q Consensus 221 h~~~v~~~~~-------~~~~~~l~s~~~dg-~------i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 285 (602)
.......++| +++++.|+++...+ . |.+.+... +............. ......
T Consensus 184 ~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~------------~~~p~g 251 (496)
T 3kya_A 184 PTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA------------YKQCNG 251 (496)
T ss_dssp SCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE------------ESCCCC
T ss_pred ccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc------------CCCceE
Confidence 2335788999 99998676665543 2 44554333 11110000011110 133567
Q ss_pred EeeCCC-CCeEEEEeCCCeEEEEcCC-------Ccce------------ee-c-ccccCCeEEEEEccCCCEEEEE-ecC
Q psy12697 286 LDWNNN-GSFLATGSYDGYARIWTSD-------GSLK------------ST-L-GQHKGPIFALKWNKRGNYILSA-GVD 342 (602)
Q Consensus 286 ~~~~~~-~~~l~~~~~dg~i~i~~~~-------~~~~------------~~-~-~~~~~~i~~~~~~~~~~~l~~~-~~d 342 (602)
++++|+ +.++++-..++.|..+|++ .... .. + .........++|+|+|+.|+.+ +..
T Consensus 252 iavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~ 331 (496)
T 3kya_A 252 ATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINN 331 (496)
T ss_dssp EEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred EEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCC
Confidence 888995 5555566677889999975 2221 11 1 1123446799999999965555 456
Q ss_pred CcEEEEeC--CCCcee--EEeeec---c------------CCee-eeecc-------CCCeEE-EeeCCCeEEEEEcCCC
Q psy12697 343 KTTIIWDA--ASGQCE--QQFSFH---S------------APAL-DVDWQ-------SNTSFA-SCSTDQHIHVCKLHSD 394 (602)
Q Consensus 343 g~i~~wd~--~~~~~~--~~~~~~---~------------~~~~-~~~~~-------~~~~~~-~~~~~~~i~i~d~~~~ 394 (602)
..|+.++. ..+... ..+.+. . .... .+... +++.++ +-..++.|+.++ .++
T Consensus 332 h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G 410 (496)
T 3kya_A 332 HYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG 410 (496)
T ss_dssp TEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC
T ss_pred CEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCC
Confidence 77888554 333221 122111 0 0122 22222 233333 334567788877 344
Q ss_pred ceeeEeccC------------------------CCCeEEEEECCC-CCEEEEEECCCeEEEEeCCCCeeeE
Q psy12697 395 KPVKSFEGH------------------------TNEVNAIKWDPQ-GLLLASCSDDMTLKIWSLDKDNCVH 440 (602)
Q Consensus 395 ~~~~~~~~~------------------------~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~ 440 (602)
. +.++-+. -.....|+++++ +.++++=..+.+|+.+++....++.
T Consensus 411 ~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 411 I-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp B-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC---
T ss_pred C-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcccc
Confidence 3 3333221 124678999986 6666665667889998887655443
No 304
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.85 E-value=0.002 Score=58.72 Aligned_cols=166 Identities=10% Similarity=0.186 Sum_probs=104.6
Q ss_pred cCCeeeeeccC-CCeEEEee-CCCeEEEEEcCCCceeeE-ecc----CC--CCeEEEEE---CCCCCEEEEEEC------
Q psy12697 363 SAPALDVDWQS-NTSFASCS-TDQHIHVCKLHSDKPVKS-FEG----HT--NEVNAIKW---DPQGLLLASCSD------ 424 (602)
Q Consensus 363 ~~~~~~~~~~~-~~~~~~~~-~~~~i~i~d~~~~~~~~~-~~~----~~--~~i~~~~~---~~~~~~l~~~~~------ 424 (602)
..-..+..|.+ ++.|..++ ..+.|..|+...+..... +.+ .. ..+..+.+ +|+++++++...
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 33455677865 56666666 689999999976543322 222 11 13679999 688888776441
Q ss_pred -------CCeEEEEeCC---CCeeeEeeccc--cccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCC
Q psy12697 425 -------DMTLKIWSLD---KDNCVHDLQAH--NKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRG 492 (602)
Q Consensus 425 -------dg~i~iwd~~---~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~ 492 (602)
+..|..||+. +++.+...... ... +.............++..++|
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~-----------------------~~~~~g~~~~~~nDvavD~~G 148 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDE-----------------------FEKKAGKRPFGVVQSAQDRDG 148 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHH-----------------------HHHHHSSCCEEEEEEEECTTS
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCcccccc-----------------------ccccccccccCCceeEECCCC
Confidence 5778899988 66655443210 000 000000011346788888899
Q ss_pred CEEEEEeCC-CeEEEEeCCCCceeeeecc------cCCCeeEeeecCCc-eEEEeeCCCcEEEeecCC
Q psy12697 493 NYILSAGVD-KTTIIWDAASGQCEQQFSF------HSAPALDVDWQSNT-SFASCSTDQHIHVCKLHS 552 (602)
Q Consensus 493 ~~l~s~~~d-g~i~iwd~~~~~~~~~~~~------~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~ 552 (602)
+..++++.. +.|...+... +.+..+.. .....+.++++|+| .|++....+.+..+|+..
T Consensus 149 naYVt~s~~~~~I~rV~pdG-~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 149 NSYVAFALGMPAIARVSADG-KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CEEEEEEESSCEEEEECTTS-CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CEEEeCCCCCCeEEEEeCCC-CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 999988888 8888888663 33332221 11236799999999 676666699999999874
No 305
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.83 E-value=0.0097 Score=62.40 Aligned_cols=156 Identities=10% Similarity=-0.039 Sum_probs=100.5
Q ss_pred CceeEEeeCCCCCeEE-EEeCCCeEEEEcCCCc-----ceeecccccCCeEEEEEccCCCEEEEE-ecCCcEEEEeCCCC
Q psy12697 281 KDVTSLDWNNNGSFLA-TGSYDGYARIWTSDGS-----LKSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAASG 353 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~-~~~~dg~i~i~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~wd~~~~ 353 (602)
..+..++|.+.+..|+ +-...+.|+.+++++. ....+.........|++.+.++.|+.+ ...+.|.+.++...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 5678899998555544 4455678888888753 223333344556789998877655544 45688999998755
Q ss_pred ceeEEeeeccCCeeeeeccCC-CeEEEee-C-CCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEE-CCCeEE
Q psy12697 354 QCEQQFSFHSAPALDVDWQSN-TSFASCS-T-DQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCS-DDMTLK 429 (602)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~-~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~ 429 (602)
.....+.........+++.+. +.++... . .+.|...++........+...-.....|++++.+..|+.+. ..+.|.
T Consensus 504 ~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~ 583 (791)
T 3m0c_C 504 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 583 (791)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEE
Confidence 443333334445777888765 5555444 2 36788888876554444444446789999998777776664 456788
Q ss_pred EEeCCCC
Q psy12697 430 IWSLDKD 436 (602)
Q Consensus 430 iwd~~~~ 436 (602)
..++...
T Consensus 584 ~~d~dG~ 590 (791)
T 3m0c_C 584 SIDVNGG 590 (791)
T ss_dssp EEETTSC
T ss_pred EEecCCC
Confidence 8887643
No 306
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.81 E-value=0.053 Score=57.44 Aligned_cols=389 Identities=10% Similarity=0.030 Sum_probs=211.9
Q ss_pred CCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEee
Q psy12697 140 TEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLI 219 (602)
Q Consensus 140 ~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 219 (602)
...|.++....+|. |..|+.+| +..||..+.+... . . .
T Consensus 62 ~~~i~~i~~d~~g~-lWigT~~G-l~~yd~~~~~f~~--~------------------------------------~--~ 99 (758)
T 3ott_A 62 NTRIYCGVIIDNTY-LYMGTDNG-ILVYNYRADRYEQ--P------------------------------------E--T 99 (758)
T ss_dssp SSCEEEEEEETTTE-EEEEETTE-EEEEETTTTEECC--C------------------------------------S--C
T ss_pred CceEEEEEEcCCCc-EEEEeCCC-eEEEeCCCCEEEC--c------------------------------------c--c
Confidence 34688887777765 44445555 7788887654210 0 0 0
Q ss_pred CCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEe
Q psy12697 220 GHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGS 299 (602)
Q Consensus 220 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 299 (602)
.....|.++.. .++ .|..++.+ -+..++..+.... . .... ........|.++....+|.+.+ |+
T Consensus 100 ~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~------~----~~~~--~~~l~~~~i~~i~~d~~g~lWi-gt 163 (758)
T 3ott_A 100 DFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT------S----FDTR--RNGLPNNTIYSIIRTKDNQIYV-GT 163 (758)
T ss_dssp CCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE------E----ECHH--HHCCSCSCEEEEEECTTCCEEE-EE
T ss_pred CCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE------E----eccC--CCCcCCCeEEEEEEcCCCCEEE-Ee
Confidence 01123555543 234 56666665 5777887554311 0 0000 0001135688888888877555 55
Q ss_pred CCCeEEEEcCCCcceeeccc------ccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccC
Q psy12697 300 YDGYARIWTSDGSLKSTLGQ------HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQS 373 (602)
Q Consensus 300 ~dg~i~i~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 373 (602)
.+| +..++........+.. ....|.++...+++..|..++. +-+..+|..+++...........+.++....
T Consensus 164 ~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~ 241 (758)
T 3ott_A 164 YNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDG 241 (758)
T ss_dssp TTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECT
T ss_pred CCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcC
Confidence 555 6677765443322211 1234888888877776666664 4588889877654332223344577777777
Q ss_pred CCeEEEeeCCCeEEEEEcCCCceeeEec-------cCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeec---
Q psy12697 374 NTSFASCSTDQHIHVCKLHSDKPVKSFE-------GHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQ--- 443 (602)
Q Consensus 374 ~~~~~~~~~~~~i~i~d~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--- 443 (602)
++.+.+|+. +-+.+++..+.+...... -....|.++..+.+|.+ -.|+..| +.++.....-......
T Consensus 242 ~g~lWigT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l-WiGT~~G-l~~~~~~~~~~~~~~~~~~ 318 (758)
T 3ott_A 242 NGDLLAGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNI-WLGTDYG-ISLSRYNSALQFIPISQIT 318 (758)
T ss_dssp TCCEEEEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCE-EEEESSS-EEEECCCC-CEEEEHHHHS
T ss_pred CCCEEEEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCE-EEEeCCc-ccccccCCceeEEecccCC
Confidence 888888885 467888876654322111 12345899998888864 4455667 5444332211111110
Q ss_pred --cccccEEEEEECCCCCCCCCCCcceeeeeeec---------c-------CCccCCeEEEEEccCCCEEEEEeCCCeEE
Q psy12697 444 --AHNKEIYTIKWSPTGPETSNPNMSLIFILKST---------L-------GQHKGPIFALKWNKRGNYILSAGVDKTTI 505 (602)
Q Consensus 444 --~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-------~~~~~~v~~i~~s~~~~~l~s~~~dg~i~ 505 (602)
.....|.++....++........ ....+... + .-....|.++.-.++|++-+. .. +-|.
T Consensus 319 ~~~~~~~v~~i~~D~~g~lWiGt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWig-t~-~GL~ 395 (758)
T 3ott_A 319 GTGDGNQFYSLFRDSKGFYWFGGAN-GLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIA-TD-GSIN 395 (758)
T ss_dssp CSCCCCBEEEEEECTTCCEEEEETT-EEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEE-ET-TEEE
T ss_pred CCCCCceEEEEEEcCCCCEEEeeCC-cceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEE-eC-CcHh
Confidence 11235677766655543221111 11111100 0 012245888888888876553 33 4699
Q ss_pred EEeCCCCceeeeec-c-----cCCCeeEeeecCCceEEEeeCCCcEEEeecCCC-----Ccee---eeecccccceEEEE
Q psy12697 506 IWDAASGQCEQQFS-F-----HSAPALDVDWQSNTSFASCSTDQHIHVCKLHSD-----KPVK---SFEGHTTGQLVHSY 571 (602)
Q Consensus 506 iwd~~~~~~~~~~~-~-----~~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~-----~~~~---~~~~~~~~~~~~~~ 571 (602)
.||..+++...... . ....|.++...+++.|-.|+..+.+.+++..+. .... .+. ...+ +
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----l 469 (758)
T 3ott_A 396 RYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYS-VHNG-----L 469 (758)
T ss_dssp EEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEEC-GGGT-----C
T ss_pred hcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccc-cccc-----c
Confidence 99988775432211 1 234578888888886666777777888885421 1110 000 0000 0
Q ss_pred ecCCcEEEEEECCCCCeEE-EeccCCeEEee
Q psy12697 572 KGTGGIFEVCWNSRGDKVG-ASASDGSVFKN 601 (602)
Q Consensus 572 ~~~~~i~~l~~spdg~~l~-~~~~dg~v~i~ 601 (602)
....|.++..+++|.+.+ .++.+|..+++
T Consensus 470 -~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d 499 (758)
T 3ott_A 470 -SGMFINQIIPDNEGNVWVLLYNNKGIDKIN 499 (758)
T ss_dssp -SCSCEEEEEECTTSCEEEEETTCSSEEEEE
T ss_pred -ccceeeeEEEcCCCCEEEEccCCCCcEEEe
Confidence 123588999999998765 36667766654
No 307
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.78 E-value=0.06 Score=57.01 Aligned_cols=401 Identities=10% Similarity=0.025 Sum_probs=209.3
Q ss_pred eeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEee-----ccCceEEEEeCCCCCCC
Q psy12697 122 LPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYK-----GTGGIFEVCWNSRGTPP 196 (602)
Q Consensus 122 i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 196 (602)
+..+|..+.+...........|.++.. .+|. |..++.+ -+..+|..+++...... ....+..+....+|...
T Consensus 84 l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW 160 (758)
T 3ott_A 84 ILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIY 160 (758)
T ss_dssp EEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEE
T ss_pred eEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEE
Confidence 566777665433211112345777754 3554 4445555 57888887765432201 12335566655555443
Q ss_pred CCCCCccccccccccCCcceEeeC------CCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEe
Q psy12697 197 NPPESMEVDASIEIPQSKATKLIG------HESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCI 270 (602)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~l~~------h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 270 (602)
..... .. ..+.........+.. ....|.++...+++..|..|+. +-+..++..++... .... .
T Consensus 161 igt~~-Gl-~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~------~~~~--l 229 (758)
T 3ott_A 161 VGTYN-GL-CRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIK------QTEA--F 229 (758)
T ss_dssp EEETT-EE-EEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEE------EEEE--E
T ss_pred EEeCC-CH-hhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEE------eccC--C
Confidence 32211 10 001111111111110 1234788888777776666664 45777776554211 0000 0
Q ss_pred cCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeeccc--------ccCCeEEEEEccCCCEEEEEecC
Q psy12697 271 SKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQ--------HKGPIFALKWNKRGNYILSAGVD 342 (602)
Q Consensus 271 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~d 342 (602)
....|.++...++|.+.+ |+.+ -+.+++........+.. ....|.++....+|.. -.|+..
T Consensus 230 --------~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l-WiGT~~ 298 (758)
T 3ott_A 230 --------HNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNI-WLGTDY 298 (758)
T ss_dssp --------EEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCE-EEEESS
T ss_pred --------CCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCE-EEEeCC
Confidence 024588888888876554 5554 47778866443332211 2345889988887764 445555
Q ss_pred CcEEEEeCCCCceeEEee-------eccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCc--eeeEec-------cCCCC
Q psy12697 343 KTTIIWDAASGQCEQQFS-------FHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDK--PVKSFE-------GHTNE 406 (602)
Q Consensus 343 g~i~~wd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~--~~~~~~-------~~~~~ 406 (602)
| +.++... .. ...+. .....+.++....++.+.+|+.+ -+..++..+++ ....+. .....
T Consensus 299 G-l~~~~~~-~~-~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 374 (758)
T 3ott_A 299 G-ISLSRYN-SA-LQFIPISQITGTGDGNQFYSLFRDSKGFYWFGGAN-GLIRFTDPAGERHDAIWYRMGDKTYPLSHNR 374 (758)
T ss_dssp S-EEEECCC-C--CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETT-EEEEESCTTSSCCCCEEECTTCSSSCCSCSC
T ss_pred c-ccccccC-Cc-eeEEecccCCCCCCCceEEEEEEcCCCCEEEeeCC-cceeecccccccceeEEeccCCcCCCCCCCc
Confidence 6 5544322 11 11111 11235677777777888888865 46666655432 111221 11245
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEee--cc----ccccEEEEEECCCCCCCCCCCcceeeeeee------
Q psy12697 407 VNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDL--QA----HNKEIYTIKWSPTGPETSNPNMSLIFILKS------ 474 (602)
Q Consensus 407 i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~------ 474 (602)
|.++.-+++|++.+ |+. +-+..||..+++..... .. ....|.++...+++..........+..+..
T Consensus 375 v~~i~~d~~g~lWi-gt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~ 452 (758)
T 3ott_A 375 IRHIYEDKEQQLWI-ATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQS 452 (758)
T ss_dssp EEEEEECTTSCEEE-EET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHC
T ss_pred eEEEEECCCCCEEE-EeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEcccccccc
Confidence 89999888887544 454 46889998876543221 11 234577777666554322211111211110
Q ss_pred ---------c---c-CCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc---cCCCeeEeeecCCceEEE
Q psy12697 475 ---------T---L-GQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF---HSAPALDVDWQSNTSFAS 538 (602)
Q Consensus 475 ---------~---~-~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~s~~~~l~~ 538 (602)
. . .-....|.++...++|++.+.++..+-|..+|..+++....... ....+.++....+|.|-.
T Consensus 453 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWi 532 (758)
T 3ott_A 453 TSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWV 532 (758)
T ss_dssp CSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEE
T ss_pred CCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEE
Confidence 0 0 01223588999999998776333344588899887654432211 123577888888885555
Q ss_pred eeCCCcEEEeecCCCC
Q psy12697 539 CSTDQHIHVCKLHSDK 554 (602)
Q Consensus 539 ~~~d~~i~iw~~~~~~ 554 (602)
|+.. .+..++..+++
T Consensus 533 gt~~-Gl~~~~~~~~~ 547 (758)
T 3ott_A 533 GFHG-GVMRINPKDES 547 (758)
T ss_dssp EETT-EEEEECC--CC
T ss_pred EecC-ceEEEecCCCc
Confidence 5554 58888866543
No 308
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.74 E-value=0.023 Score=51.26 Aligned_cols=248 Identities=11% Similarity=0.106 Sum_probs=153.8
Q ss_pred CeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEee
Q psy12697 302 GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCS 381 (602)
Q Consensus 302 g~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (602)
..|.+.|+......... .-.-.+.-.+|..+.++.-. ...+.++|+++.+.++.+... .++.-=.|..+..++..+
T Consensus 49 ~~VvIiDl~n~~~~~Rr--pi~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~L~lVT 124 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRR--PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT 124 (365)
T ss_dssp EEEEEEETTSTTSCEEE--ECCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSEEEEEE
T ss_pred CEEEEEECCCCCCcccc--ccccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCeEEEEc
Confidence 36888887642211111 11112344588877666554 778999999999999888765 467777788888776665
Q ss_pred CCCeEEEEEcCC-CceeeEeccCC----CCeEEEEECCCCCEEEEEEC-------CCeEEEEeCCCCeeeEeeccccccE
Q psy12697 382 TDQHIHVCKLHS-DKPVKSFEGHT----NEVNAIKWDPQGLLLASCSD-------DMTLKIWSLDKDNCVHDLQAHNKEI 449 (602)
Q Consensus 382 ~~~~i~i~d~~~-~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~i 449 (602)
+..|+-|++.. ..|++.+..|. ..|..-..+++.++++..+- .|.+.+|..+.+ ..+.+++|...-
T Consensus 125 -~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F 202 (365)
T 2xzh_A 125 -DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASF 202 (365)
T ss_dssp -SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEE
T ss_pred -CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeee
Confidence 56899999975 45666666553 46888889999999876653 377899998754 233344443222
Q ss_pred EE------------EEECCCCCC--------CCCC------CcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCe
Q psy12697 450 YT------------IKWSPTGPE--------TSNP------NMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKT 503 (602)
Q Consensus 450 ~~------------~~~~~~~~~--------~~~~------~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~ 503 (602)
.. ++|...... +..+ .......+.........-..++..|+.-..+..-..-|.
T Consensus 203 ~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ 282 (365)
T 2xzh_A 203 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY 282 (365)
T ss_dssp EEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSE
T ss_pred EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcE
Confidence 11 121111000 0000 000000001111122333456777777778888889999
Q ss_pred EEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCc
Q psy12697 504 TIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKP 555 (602)
Q Consensus 504 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~ 555 (602)
|++||++++.++..-+-...+|...+-..+. -++.....|.|.--.++....
T Consensus 283 ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 283 IHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred EEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 9999999999998877777777766655443 566666888877777665543
No 309
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.74 E-value=0.02 Score=52.16 Aligned_cols=162 Identities=10% Similarity=0.079 Sum_probs=107.0
Q ss_pred CCeEEEEEccCCCEEEEEe-cCCcEEEEeCCCCceeEE-eee----c--cCCeeeeec---cCCCeEEEeeC--------
Q psy12697 322 GPIFALKWNKRGNYILSAG-VDKTTIIWDAASGQCEQQ-FSF----H--SAPALDVDW---QSNTSFASCST-------- 382 (602)
Q Consensus 322 ~~i~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~-~~~----~--~~~~~~~~~---~~~~~~~~~~~-------- 382 (602)
....++.|.+....|..++ ..++|..||...+..... +.. . ...+..+.| .+++.++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 3445789988666666666 689999999876644333 211 0 113567888 46677665433
Q ss_pred ------CCeEEEEEcC---CCceeeEec--c-----------CCCCeEEEEECCCCCEEEEEECC-CeEEEEeCCCCeee
Q psy12697 383 ------DQHIHVCKLH---SDKPVKSFE--G-----------HTNEVNAIKWDPQGLLLASCSDD-MTLKIWSLDKDNCV 439 (602)
Q Consensus 383 ------~~~i~i~d~~---~~~~~~~~~--~-----------~~~~i~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~ 439 (602)
+..+..+|+. +++.+.... . .......++.+++|+..++++.. +.|...+.+.. .+
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~ 171 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TV 171 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CE
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EE
Confidence 5789999999 777665443 1 11248899999999999999887 87776665432 22
Q ss_pred EeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC
Q psy12697 440 HDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG 512 (602)
Q Consensus 440 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~ 512 (602)
..+.. .+ .........+.|+++|+|+.|++....|.|..+|+.+.
T Consensus 172 ~~~~~----------~~------------------~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 172 STFAW----------ES------------------GNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEEE----------CC------------------CCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eeeee----------cC------------------CCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 11100 00 00112345678999999999988877999999998854
No 310
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.71 E-value=0.001 Score=69.22 Aligned_cols=211 Identities=7% Similarity=-0.111 Sum_probs=121.2
Q ss_pred CcceEEEEEcCCCCEEEEee-CCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCC-CeEEEEe
Q psy12697 222 ESEVFICAWNPVKDFLASGS-GDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNG-SFLATGS 299 (602)
Q Consensus 222 ~~~v~~~~~~~~~~~l~s~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~ 299 (602)
...+..++|.+.+..|+.+. ..+.|..+++............ ..........+++.+.+ +++++-.
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~------------i~~~~~~P~glavD~~~g~LY~tD~ 472 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV------------ISRDIQAPDGLAVDWIHSNIYWTDS 472 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCB------------CCSCC--CCCEECCCSSSBCEECCT
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEE------------EeCCCCCcceEEEEeeCCcEEEEec
Confidence 34566889998776666554 4678888888752100000000 00001234567887644 4444445
Q ss_pred CCCeEEEEcCCCcceeeccc-ccCCeEEEEEccCCCEEEEEec--CCcEEEEeCCCCceeEEeeeccCCeeeeeccCC-C
Q psy12697 300 YDGYARIWTSDGSLKSTLGQ-HKGPIFALKWNKRGNYILSAGV--DKTTIIWDAASGQCEQQFSFHSAPALDVDWQSN-T 375 (602)
Q Consensus 300 ~dg~i~i~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~ 375 (602)
..+.|.++++++.....+.. .......+++.|.+.+|+.+.. .+.|..+++............-.....+++.++ +
T Consensus 473 ~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~ 552 (699)
T 1n7d_A 473 VLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSG 552 (699)
T ss_dssp TTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTC
T ss_pred cCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCC
Confidence 66889999998776555432 2345678899987666655543 267777776533222222222234567788764 3
Q ss_pred e-EEEeeCCCeEEEEEcCCCceeeEec--cCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccc
Q psy12697 376 S-FASCSTDQHIHVCKLHSDKPVKSFE--GHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAH 445 (602)
Q Consensus 376 ~-~~~~~~~~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 445 (602)
. +++-...+.|..+++........+. ........|++..+ .++++....+.|..++..+++.+..+...
T Consensus 553 ~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~ 624 (699)
T 1n7d_A 553 RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAEN 624 (699)
T ss_dssp CEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCTT
T ss_pred EEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeecC
Confidence 3 4455566789999986543322222 11233445666554 45555556788999998888877776543
No 311
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.71 E-value=0.035 Score=52.30 Aligned_cols=248 Identities=11% Similarity=0.109 Sum_probs=154.6
Q ss_pred CeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEee
Q psy12697 302 GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCS 381 (602)
Q Consensus 302 g~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (602)
..|.+.|+......... .-.-.+.-.+|..+.++.-. ..++.++|+++...++.+.... ++.-=.|..+..++..+
T Consensus 48 ~~vvIiDl~~~~~~~rr--pi~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~l~lVT 123 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRR--PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALVT 123 (494)
T ss_dssp CEEEEEETTSTTSCEEE--ECCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTEEEEEC
T ss_pred CeEEEEECCCCCcceec--ccccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCeEEEEc
Confidence 36778887642211111 11122445678777666544 7799999999999988887654 56666777777766654
Q ss_pred CCCeEEEEEcCC-CceeeEeccCC----CCeEEEEECCCCCEEEEEEC-------CCeEEEEeCCCCeeeEeeccccccE
Q psy12697 382 TDQHIHVCKLHS-DKPVKSFEGHT----NEVNAIKWDPQGLLLASCSD-------DMTLKIWSLDKDNCVHDLQAHNKEI 449 (602)
Q Consensus 382 ~~~~i~i~d~~~-~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~i 449 (602)
+..|+-|++.. ..|++.+..|. ..|..-..+++.++++..+- .|.+.+|..+.+ ..+.+.+|...-
T Consensus 124 -~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F 201 (494)
T 1bpo_A 124 -DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASF 201 (494)
T ss_dssp -SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEE
T ss_pred -CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeee
Confidence 56899999974 45767666553 46888889999999886542 477899998753 333344443322
Q ss_pred --------------EEEEECCC-CCC-----CCCC------CcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCe
Q psy12697 450 --------------YTIKWSPT-GPE-----TSNP------NMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKT 503 (602)
Q Consensus 450 --------------~~~~~~~~-~~~-----~~~~------~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~ 503 (602)
.+.+.... +.. +..+ .......+.........--.++..|+.-..+.....-|.
T Consensus 202 ~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~ 281 (494)
T 1bpo_A 202 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY 281 (494)
T ss_dssp EEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSE
T ss_pred EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCce
Confidence 22222211 000 0000 000000011111122344557778888788888889999
Q ss_pred EEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCc
Q psy12697 504 TIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKP 555 (602)
Q Consensus 504 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~ 555 (602)
|.+||++++.++..-+-...+|...+-.... -++.....|.|.--.++....
T Consensus 282 i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 282 IHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred EEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccc
Confidence 9999999999998777777777766665544 666666888877777665543
No 312
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.67 E-value=0.04 Score=51.90 Aligned_cols=260 Identities=11% Similarity=0.115 Sum_probs=162.4
Q ss_pred cceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCC
Q psy12697 120 LTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPP 199 (602)
Q Consensus 120 ~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (602)
.+|.|.|+.++..+.+-.-. -.+.-.+|..+.||--. ..++.|+|+++...+..+....+
T Consensus 48 ~~vvIiDl~~~~~~~rrpi~---AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~---------------- 107 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD---------------- 107 (494)
T ss_dssp CEEEEEETTSTTSCEEEECC---CSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSC----------------
T ss_pred CeEEEEECCCCCcceecccc---cceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCC----------------
Confidence 47889999876554222111 12345678788777664 78999999999999887764433
Q ss_pred CCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCC
Q psy12697 200 ESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPS 279 (602)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (602)
|.--.|-.+ +.|+..+ +..|.-|++..... +...+.++. .. .
T Consensus 108 -------------------------VvfWkWis~-~~l~lVT-~taVyHWsi~~~s~----P~kvFdR~~-----~L--~ 149 (494)
T 1bpo_A 108 -------------------------VTFWKWISL-NTVALVT-DNAVYHWSMEGESQ----PVKMFDRHS-----SL--A 149 (494)
T ss_dssp -------------------------CCEEEEEET-TEEEEEC-SSEEEEEESSSSCC----CEEEEECCG-----GG--T
T ss_pred -------------------------ceEEEecCC-CeEEEEc-CCeeEEecccCCCC----chhheecch-----hc--c
Confidence 333444432 2344333 35799999875321 111121211 11 1
Q ss_pred CCceeEEeeCCCCCeEEEEeC-------CCeEEEEcCCCcceeecccccCCeEEEEEccCC---CEEEEEec---CCcEE
Q psy12697 280 NKDVTSLDWNNNGSFLATGSY-------DGYARIWTSDGSLKSTLGQHKGPIFALKWNKRG---NYILSAGV---DKTTI 346 (602)
Q Consensus 280 ~~~i~~~~~~~~~~~l~~~~~-------dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~---dg~i~ 346 (602)
...|..-..+++.++++..+- .|.+.+|..+.+..+.+.+|......+....+. +.+..+.. .+.+.
T Consensus 150 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 229 (494)
T 1bpo_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (494)
T ss_dssp TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEE
T ss_pred cceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 467888888999998875442 478999999999999999998777666554222 23333433 27888
Q ss_pred EEeCCCC---c-----eeEEeeec----cCCeeeeeccC-CCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEEC
Q psy12697 347 IWDAASG---Q-----CEQQFSFH----SAPALDVDWQS-NTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWD 413 (602)
Q Consensus 347 ~wd~~~~---~-----~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 413 (602)
+.++... . ....+... .+-..++..++ .+.+...+.-|.+++||+.++..+..-+-..+.|...+.+
T Consensus 230 i~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~ 309 (494)
T 1bpo_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPH 309 (494)
T ss_dssp EEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE
T ss_pred EEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEeccc
Confidence 8888543 1 11111111 11223333333 3678888999999999999999988777666667666666
Q ss_pred CCCCEEEEEECCCeEEEEeCCCCe
Q psy12697 414 PQGLLLASCSDDMTLKIWSLDKDN 437 (602)
Q Consensus 414 ~~~~~l~~~~~dg~i~iwd~~~~~ 437 (602)
....-++.....|.|.--.++...
T Consensus 310 ~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 310 EATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp TTTTEEEEEETTCEEEEEEECTTT
T ss_pred CCCCcEEEEccCceEEEEEEcccc
Confidence 555556666677777666665543
No 313
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.64 E-value=0.041 Score=51.82 Aligned_cols=51 Identities=16% Similarity=0.322 Sum_probs=30.9
Q ss_pred EEEeeCCCeEEEEEcCCCceeeE---eccCCCCeEEEEECCCCCEEEEEE-CCCe
Q psy12697 377 FASCSTDQHIHVCKLHSDKPVKS---FEGHTNEVNAIKWDPQGLLLASCS-DDMT 427 (602)
Q Consensus 377 ~~~~~~~~~i~i~d~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~-~dg~ 427 (602)
+++....+.|...++..++.+.. +......+..+++.|||.+.++.. .+|.
T Consensus 292 ~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~ 346 (353)
T 2g8s_A 292 FIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGE 346 (353)
T ss_dssp EEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEE
T ss_pred EEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCE
Confidence 34444567777777765543322 222345789999999998666543 3443
No 314
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.61 E-value=0.048 Score=51.34 Aligned_cols=238 Identities=13% Similarity=0.111 Sum_probs=120.7
Q ss_pred CCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCCCCccccccccccCCcceEee
Q psy12697 140 TEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLI 219 (602)
Q Consensus 140 ~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 219 (602)
-.....|+|.|||+++++ ..++.|.+++ .+++ ..+... + ...
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~--~~~~~~-----------------------------~-----v~~ 69 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGK--KLVASF-----------------------------D-----VAN 69 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCE--EEEEEC-----------------------------C-----CCC
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCc--eEeecc-----------------------------c-----eee
Confidence 345789999999985555 5569999887 4454 211100 0 001
Q ss_pred CCCcceEEEEEcCC---CCEEEEeeC----C----CcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEee
Q psy12697 220 GHESEVFICAWNPV---KDFLASGSG----D----STARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDW 288 (602)
Q Consensus 220 ~h~~~v~~~~~~~~---~~~l~s~~~----d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 288 (602)
........++++|+ +..|+.+.. + ..|..|+....... ......+... ... ........++|
T Consensus 70 ~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~-~~~~~~l~~~-~~~-----~~~h~~~~l~~ 142 (354)
T 3a9g_A 70 VGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFK-LKEVKTLIDG-IPG-----AYIHNGGRIRF 142 (354)
T ss_dssp STTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCC-EEEEEEEEEE-EEC-----CSSCCCCCEEE
T ss_pred cCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcC-cCccEEEEEc-CCC-----CCCcCCceEEE
Confidence 12345778999997 555544432 2 55666776543211 0011111111 110 01123467999
Q ss_pred CCCCCeEEEEeC-------------CCeEEEEcCCCcc--------eeec-ccccCCeEEEEEcc-CCCEEEEEecCC--
Q psy12697 289 NNNGSFLATGSY-------------DGYARIWTSDGSL--------KSTL-GQHKGPIFALKWNK-RGNYILSAGVDK-- 343 (602)
Q Consensus 289 ~~~~~~l~~~~~-------------dg~i~i~~~~~~~--------~~~~-~~~~~~i~~~~~~~-~~~~l~~~~~dg-- 343 (602)
.|||.+.++.+. .|.|.-++.++.. ...+ .++. ....++|+| +++.+++-....
T Consensus 143 ~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~ 221 (354)
T 3a9g_A 143 GPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGH 221 (354)
T ss_dssp CTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSC
T ss_pred CCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCC
Confidence 999987666432 2567777766541 1111 1232 346899999 566444432211
Q ss_pred -cEEEEeCCC--------C--------ceeEEeeeccCCeeeeecc-------CCCeEEEe-eCCCeEEEEEcCCC-cee
Q psy12697 344 -TTIIWDAAS--------G--------QCEQQFSFHSAPALDVDWQ-------SNTSFASC-STDQHIHVCKLHSD-KPV 397 (602)
Q Consensus 344 -~i~~wd~~~--------~--------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~i~i~d~~~~-~~~ 397 (602)
.|.+..... + .....+.........+.+. .++.++++ ...+.|...++... +..
T Consensus 222 dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~ 301 (354)
T 3a9g_A 222 DEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVR 301 (354)
T ss_dssp CEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEE
T ss_pred cEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCccc
Confidence 233322100 0 0111111112234455552 23444444 45567888888753 221
Q ss_pred --eEe-ccCCCCeEEEEECCCCCEEEEEE
Q psy12697 398 --KSF-EGHTNEVNAIKWDPQGLLLASCS 423 (602)
Q Consensus 398 --~~~-~~~~~~i~~~~~~~~~~~l~~~~ 423 (602)
..+ .+....+..+++.|||.+.++..
T Consensus 302 ~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 302 KISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred ceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 222 22345789999999997766654
No 315
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.44 E-value=0.032 Score=52.05 Aligned_cols=103 Identities=7% Similarity=0.001 Sum_probs=63.0
Q ss_pred CCeEEEEEccCCCEEEEEe-----------------CCCeEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEE-EeeC
Q psy12697 481 GPIFALKWNKRGNYILSAG-----------------VDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFA-SCST 541 (602)
Q Consensus 481 ~~v~~i~~s~~~~~l~s~~-----------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~-~~~~ 541 (602)
...+.+.+.++|++.++.. ..|.|.-+|. ++. ..+...-...+.++|+||+ .+. +-+.
T Consensus 165 ~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~-~~~~~~l~~pNGia~spDg~~lYvadt~ 241 (355)
T 3sre_A 165 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDV-RVVAEGFDFANGINISPDGKYVYIAELL 241 (355)
T ss_dssp SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCC-EEEEEEESSEEEEEECTTSSEEEEEEGG
T ss_pred CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeE-EEeecCCcccCcceECCCCCEEEEEeCC
Confidence 4567888888888777654 1255666665 332 2222233456889999999 544 4456
Q ss_pred CCcEEEeecCCCCceeeeecccccceEEEEecCCcEEEEEECC-CCCeEEEeccC
Q psy12697 542 DQHIHVCKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCWNS-RGDKVGASASD 595 (602)
Q Consensus 542 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~sp-dg~~l~~~~~d 595 (602)
.+.|..|++.....+.. .+.+...+..-.++.++ +|++.+++.-+
T Consensus 242 ~~~I~~~~~~~~g~l~~---------~~~~~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 242 AHKIHVYEKHANWTLTP---------LRVLSFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp GTEEEEEEECTTSCEEE---------EEEEECSSEEEEEEECTTTCCEEEEEESC
T ss_pred CCeEEEEEECCCCcEec---------CEEEeCCCCCceEEEeCCCCcEEEEecCC
Confidence 78999999864221111 11122245677888999 58877766433
No 316
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.43 E-value=0.083 Score=49.74 Aligned_cols=239 Identities=10% Similarity=0.054 Sum_probs=120.2
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCCCc-ceeec---ccccCCeEEEEEccC---CCEEEEEec----C----CcE
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSDGS-LKSTL---GQHKGPIFALKWNKR---GNYILSAGV----D----KTT 345 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~-~~~~~---~~~~~~i~~~~~~~~---~~~l~~~~~----d----g~i 345 (602)
.....++|.|+|+ |+++..+|.|.+++.++. .+..+ .........|+++|+ +..|+.+.. + ..|
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 3468899999997 555566699999986665 11111 122356889999997 455554433 2 567
Q ss_pred EEEeCCCC--ce-----e-EEeee-ccCCeeeeeccCCCeEEEeeCC--------------CeEEEEEcCCC--------
Q psy12697 346 IIWDAASG--QC-----E-QQFSF-HSAPALDVDWQSNTSFASCSTD--------------QHIHVCKLHSD-------- 394 (602)
Q Consensus 346 ~~wd~~~~--~~-----~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~--------------~~i~i~d~~~~-------- 394 (602)
..|+.... .. + ..+.. .......+.|.+++.+.++..+ |.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 77776543 11 1 11221 1123456888888776665432 45555554422
Q ss_pred ceeeEeccCCCCeEEEEECC-CCCEEEEEECCC---eEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceee
Q psy12697 395 KPVKSFEGHTNEVNAIKWDP-QGLLLASCSDDM---TLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIF 470 (602)
Q Consensus 395 ~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 470 (602)
.......++. ....++|+| +++++++-...+ .|.+.. .+...- ....... .... .. .
T Consensus 188 ~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyG-wp~~~g~-------~~~~-----~~---~ 248 (354)
T 3a9g_A 188 NSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYG-WPLATGK-------AGRG-----EF---V 248 (354)
T ss_dssp TCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCC-TTTCCSC-------CCCT-----TS---C
T ss_pred CCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCC-CCcccCC-------CCCC-----CC---c
Confidence 0111112232 346788998 565444432221 122211 111000 0000000 0000 00 0
Q ss_pred eeeeccCCccCCeEEEEE-------ccCCCEEEEEeCCCeEEEEeCCCC-cee--eee-cccCCCeeEeeecCCc-eEEE
Q psy12697 471 ILKSTLGQHKGPIFALKW-------NKRGNYILSAGVDKTTIIWDAASG-QCE--QQF-SFHSAPALDVDWQSNT-SFAS 538 (602)
Q Consensus 471 ~~~~~~~~~~~~v~~i~~-------s~~~~~l~s~~~dg~i~iwd~~~~-~~~--~~~-~~~~~~v~~~~~s~~~-~l~~ 538 (602)
.....+.........++| ..+|+++++.-..+.|...++... +.. ..+ ......+..+++.||| .+++
T Consensus 249 ~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~ 328 (354)
T 3a9g_A 249 DPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIS 328 (354)
T ss_dssp CCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEE
T ss_pred CCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEE
Confidence 000011012235566777 357777777777788888888753 322 222 2224568899999999 4444
Q ss_pred e
Q psy12697 539 C 539 (602)
Q Consensus 539 ~ 539 (602)
.
T Consensus 329 ~ 329 (354)
T 3a9g_A 329 T 329 (354)
T ss_dssp E
T ss_pred E
Confidence 3
No 317
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.41 E-value=0.0081 Score=56.48 Aligned_cols=147 Identities=13% Similarity=0.126 Sum_probs=87.5
Q ss_pred CCeEEEEEcCCCceeeEeccC----CCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCC
Q psy12697 383 DQHIHVCKLHSDKPVKSFEGH----TNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTG 458 (602)
Q Consensus 383 ~~~i~i~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~ 458 (602)
++.|+..++.....-+.+... ...|..+..+|+|++||..+. ..|.|-.+..+.....-......+..-.|.
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~--- 115 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYS--- 115 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEE---
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEE---
Confidence 467777777644434444332 236888999999999999865 578998887432111000000111111110
Q ss_pred CCCCCCCcceeeeeeeccCCccCCeEEEEEcc---CCCEEEEEeCCCeEEEEeCCCCc--eeeeec---------ccCCC
Q psy12697 459 PETSNPNMSLIFILKSTLGQHKGPIFALKWNK---RGNYILSAGVDKTTIIWDAASGQ--CEQQFS---------FHSAP 524 (602)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~---~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~---------~~~~~ 524 (602)
+.........+|..+.|+| .+..|++-..|+.|++||+.... +. .++ .....
T Consensus 116 -------------l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~e 181 (452)
T 3pbp_A 116 -------------IDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVND 181 (452)
T ss_dssp -------------GGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCC
T ss_pred -------------cCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccce
Confidence 0000111356788888887 45689999999999999998522 11 222 12256
Q ss_pred eeEeeecCCc-eEEE--eeCCCcEEE
Q psy12697 525 ALDVDWQSNT-SFAS--CSTDQHIHV 547 (602)
Q Consensus 525 v~~~~~s~~~-~l~~--~~~d~~i~i 547 (602)
|.+++|.+++ .|.. ....|.|+-
T Consensus 182 v~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 182 ITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred EEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 8899999988 4444 457787764
No 318
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.38 E-value=0.097 Score=49.26 Aligned_cols=248 Identities=9% Similarity=0.031 Sum_probs=122.1
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeec-------ccccCCeEEEEEccC---CCEEEEEe-c-------C
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTL-------GQHKGPIFALKWNKR---GNYILSAG-V-------D 342 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~-------~~~~~~i~~~~~~~~---~~~l~~~~-~-------d 342 (602)
.....|+|.|+|+.++++...|.|++++.++.....+ .........++++|+ +..|..+. . .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 3468999999998455556789999998665432111 122345789999995 44554442 2 2
Q ss_pred CcEEEEeCCCC--ce--eEE-eee------ccCCeeeeeccCCCeEEEeeCC--------------CeEEEEEcCCCc--
Q psy12697 343 KTTIIWDAASG--QC--EQQ-FSF------HSAPALDVDWQSNTSFASCSTD--------------QHIHVCKLHSDK-- 395 (602)
Q Consensus 343 g~i~~wd~~~~--~~--~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~--------------~~i~i~d~~~~~-- 395 (602)
..|..++.... .. ... +.. .......+.|.+++.|.++..+ |.|.-++....-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35666665432 11 111 111 1122457889999887766533 467667665320
Q ss_pred ----------eeeEe-ccCCCCeEEEEECC-CCCEEEEEEC-CCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCC
Q psy12697 396 ----------PVKSF-EGHTNEVNAIKWDP-QGLLLASCSD-DMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETS 462 (602)
Q Consensus 396 ----------~~~~~-~~~~~~i~~~~~~~-~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 462 (602)
....+ .++ .....++|+| +|+++++-.. ++.=.|.-+..+...- ....... ..+.+ ....
T Consensus 178 ~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyG-wp~~~~~---~~~~~--~~~~ 250 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYG-WPLATWG---INYSG--FKIP 250 (353)
T ss_dssp TCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCC-TTTBCSS---BCTTS--SCCT
T ss_pred CCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCC-CCCccCC---CCCCC--CccC
Confidence 11111 223 2367899999 5544443221 1111222222221100 0000000 00000 0000
Q ss_pred CC---CcceeeeeeeccCCccCCeEEEEEcc-------CCCEEEEEeCCCeEEEEeCCCCceeee---ecccCCCeeEee
Q psy12697 463 NP---NMSLIFILKSTLGQHKGPIFALKWNK-------RGNYILSAGVDKTTIIWDAASGQCEQQ---FSFHSAPALDVD 529 (602)
Q Consensus 463 ~~---~~~~~~~~~~~~~~~~~~v~~i~~s~-------~~~~l~s~~~dg~i~iwd~~~~~~~~~---~~~~~~~v~~~~ 529 (602)
.. .......-...+ .+......++|.. +|+++++.-..+.|...++..++.... +......+..++
T Consensus 251 ~~~~~~~~~~~~P~~~~-~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~ 329 (353)
T 2g8s_A 251 EAKGEIVAGTEQPVFYW-KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVR 329 (353)
T ss_dssp TCCBSSCTTSCCCSEEE-SSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEE
T ss_pred cccCCCCCCccCCeEEe-CCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEE
Confidence 00 000000000011 1224566777753 577777777788888888876543322 222235788999
Q ss_pred ecCCceE
Q psy12697 530 WQSNTSF 536 (602)
Q Consensus 530 ~s~~~~l 536 (602)
+.|||.|
T Consensus 330 ~~pdG~l 336 (353)
T 2g8s_A 330 TGPDGYL 336 (353)
T ss_dssp ECTTSCE
T ss_pred ECCCCcE
Confidence 9999933
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.31 E-value=0.035 Score=51.00 Aligned_cols=226 Identities=9% Similarity=0.055 Sum_probs=108.9
Q ss_pred CCCeEEEEe-CC-----CeEEEEcCCCcceeecccccCC-eEEEEEccCCCEEEEEecC-----CcEEEEeCCCCc---e
Q psy12697 291 NGSFLATGS-YD-----GYARIWTSDGSLKSTLGQHKGP-IFALKWNKRGNYILSAGVD-----KTTIIWDAASGQ---C 355 (602)
Q Consensus 291 ~~~~l~~~~-~d-----g~i~i~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~---~ 355 (602)
++.+++.|+ .+ ..+..||........+.....+ ........++..++.|+.+ ..+.+||..+.+ .
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 445666666 33 3678888765443333211111 1111112356667777754 468899988876 3
Q ss_pred eEEeeeccC-CeeeeeccCCCeEEEeeCC-----CeEEEEEcCCCceee--EeccCCCCeEEEEECCCCCEEEEEECC--
Q psy12697 356 EQQFSFHSA-PALDVDWQSNTSFASCSTD-----QHIHVCKLHSDKPVK--SFEGHTNEVNAIKWDPQGLLLASCSDD-- 425 (602)
Q Consensus 356 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d-- 425 (602)
...-..... .-..+....+..++.|+.+ ..+.+||..+.+-.. .+......-..+.+ ++++++.|+.+
T Consensus 94 ~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 171 (301)
T 2vpj_A 94 YSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGL 171 (301)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSS
T ss_pred EECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCC
Confidence 332221111 1112222344556666543 468889987765322 22111111222222 56677777654
Q ss_pred ---CeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCC-
Q psy12697 426 ---MTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVD- 501 (602)
Q Consensus 426 ---g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d- 501 (602)
..+.+||+.+.+-... .. .|. ....-..+. -++++++.|+.+
T Consensus 172 ~~~~~~~~~d~~~~~W~~~-~~----------~p~---------------------~r~~~~~~~--~~~~i~v~GG~~~ 217 (301)
T 2vpj_A 172 NILNSVEKYDPHTGHWTNV-TP----------MAT---------------------KRSGAGVAL--LNDHIYVVGGFDG 217 (301)
T ss_dssp CBCCCEEEEETTTTEEEEE-CC----------CSS---------------------CCBSCEEEE--ETTEEEEECCBCS
T ss_pred cccceEEEEeCCCCcEEeC-CC----------CCc---------------------ccccceEEE--ECCEEEEEeCCCC
Confidence 3467777765432111 00 000 000111111 256777777764
Q ss_pred ----CeEEEEeCCCCceeeeecccCCCe-eEeeecCCc-eEEEeeCC-----CcEEEeecCCC
Q psy12697 502 ----KTTIIWDAASGQCEQQFSFHSAPA-LDVDWQSNT-SFASCSTD-----QHIHVCKLHSD 553 (602)
Q Consensus 502 ----g~i~iwd~~~~~~~~~~~~~~~~v-~~~~~s~~~-~l~~~~~d-----~~i~iw~~~~~ 553 (602)
..+.+||+.+.+-...-....... .+++.. ++ .++.|+.+ ..+.+||+++.
T Consensus 218 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL-RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CcccceEEEEeCCCCcEEECCCCCCcccceeEEEE-CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 468999998765433211111111 122222 45 66667655 35777887654
No 320
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.11 E-value=0.05 Score=51.21 Aligned_cols=114 Identities=11% Similarity=0.186 Sum_probs=76.4
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCce------------eeeecc------cCCCeeEeeecCCc----eEEEe
Q psy12697 482 PIFALKWNKRGNYILSAGVDKTTIIWDAASGQC------------EQQFSF------HSAPALDVDWQSNT----SFASC 539 (602)
Q Consensus 482 ~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~------------~~~~~~------~~~~v~~~~~s~~~----~l~~~ 539 (602)
.|..+..||+|++||..+. ..|.|-.+..+.. .+.+.. ...+|..+.|+|-+ .|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 4567888889999998864 4688888773321 112221 25679999999965 79999
Q ss_pred eCCCcEEEeecCCC--CceeeeecccccceEEEEecCCcEEEEEECCCCCeEEEec--cCCeEE
Q psy12697 540 STDQHIHVCKLHSD--KPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGDKVGASA--SDGSVF 599 (602)
Q Consensus 540 ~~d~~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~~l~~~~--~dg~v~ 599 (602)
..|+.|++||+... +|. .++... + ....-.....|.+++|.+++-.|.+.. .+|-|+
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~-~-~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPN-N-SFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCC-S-EEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhccc-c-ccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence 99999999999863 233 333111 1 000000125689999999998887744 788775
No 321
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.10 E-value=0.24 Score=48.32 Aligned_cols=34 Identities=9% Similarity=0.143 Sum_probs=25.0
Q ss_pred CCceEEEEECCCCCeEEEeeCCceEEEEecCCce
Q psy12697 140 TEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQ 173 (602)
Q Consensus 140 ~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~ 173 (602)
-...+.|+|.|||+++++-...+.|.+++..+++
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~ 59 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGS 59 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc
Confidence 3456799999999988776544578888765554
No 322
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.95 E-value=0.021 Score=52.76 Aligned_cols=111 Identities=11% Similarity=0.062 Sum_probs=73.9
Q ss_pred CEEEEEecCCcEEEEeCCCCceeEEeeecc-CCeeeee---ccCCCeEEEe--eCCCeEEEEEcCCCceeeEecc----C
Q psy12697 334 NYILSAGVDKTTIIWDAASGQCEQQFSFHS-APALDVD---WQSNTSFASC--STDQHIHVCKLHSDKPVKSFEG----H 403 (602)
Q Consensus 334 ~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~--~~~~~i~i~d~~~~~~~~~~~~----~ 403 (602)
..++.++.||.|.-+|..+|+....+.... .++.... ...++.++++ +.||.|+.++..++.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 478899999999999999999999887651 2222211 1113344444 5899999999988754433321 1
Q ss_pred CCCeEE---EEE-C----CCCCEEEEEECCCeEEEEeCCCCeeeEeecc
Q psy12697 404 TNEVNA---IKW-D----PQGLLLASCSDDMTLKIWSLDKDNCVHDLQA 444 (602)
Q Consensus 404 ~~~i~~---~~~-~----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 444 (602)
..++.. ..+ . ..+..+++|+.+|++.-.|+++|+.+..+..
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 112221 000 0 1455788999999999999999999988764
No 323
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.93 E-value=0.26 Score=45.96 Aligned_cols=189 Identities=11% Similarity=0.139 Sum_probs=99.9
Q ss_pred eEEEEEccCCCEEEEE------------ecCCcEEEEeCCCCc-eeEEeeec-------cCCeeeeeccC--CC--eEEE
Q psy12697 324 IFALKWNKRGNYILSA------------GVDKTTIIWDAASGQ-CEQQFSFH-------SAPALDVDWQS--NT--SFAS 379 (602)
Q Consensus 324 i~~~~~~~~~~~l~~~------------~~dg~i~~wd~~~~~-~~~~~~~~-------~~~~~~~~~~~--~~--~~~~ 379 (602)
..++...|+|..++++ ..+|.|.++|..+.. ....+... ......+.+.+ ++ .+++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 3455566666444443 268999999987421 12222221 22445555433 22 3444
Q ss_pred ee-C--CCeEEEEEcCCCc----eeeEeccC-CCCeEEEEECCCCCEEEEEEC---C--------------CeEEEEeCC
Q psy12697 380 CS-T--DQHIHVCKLHSDK----PVKSFEGH-TNEVNAIKWDPQGLLLASCSD---D--------------MTLKIWSLD 434 (602)
Q Consensus 380 ~~-~--~~~i~i~d~~~~~----~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~---d--------------g~i~iwd~~ 434 (602)
+. . +..|.+|++.... .+..+.+. -...+.+.+.++|.+.++... | |.|..+|.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 43 3 4677787765432 22333332 235788999999987776541 1 22222221
Q ss_pred CCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEe-CCCeEEEEeCCC-C
Q psy12697 435 KDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAAS-G 512 (602)
Q Consensus 435 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~-~dg~i~iwd~~~-~ 512 (602)
++ +.. +...-..-+.++||||++.|..+. ..+.|..|++.. +
T Consensus 211 -~~-----------~~~------------------------~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g 254 (355)
T 3sre_A 211 -ND-----------VRV------------------------VAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANW 254 (355)
T ss_dssp -TC-----------CEE------------------------EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred -Ce-----------EEE------------------------eecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCC
Confidence 10 000 001123457899999998877665 568899999863 3
Q ss_pred cee--eeecccCCCeeEeeecC-Cc-eEEEeeCC-CcEEEeec
Q psy12697 513 QCE--QQFSFHSAPALDVDWQS-NT-SFASCSTD-QHIHVCKL 550 (602)
Q Consensus 513 ~~~--~~~~~~~~~v~~~~~s~-~~-~l~~~~~d-~~i~iw~~ 550 (602)
+.. ..+. ..+..-.+++.+ +| .++++..+ +.|..|+-
T Consensus 255 ~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 255 TLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp CEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred cEecCEEEe-CCCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 321 2332 244567788888 58 44545433 34444443
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.90 E-value=0.084 Score=44.73 Aligned_cols=141 Identities=8% Similarity=-0.029 Sum_probs=83.3
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccCC--------eEEEEEccCCCEEEEEecCCcEEEEeCCC
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGP--------IFALKWNKRGNYILSAGVDKTTIIWDAAS 352 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 352 (602)
..++.++|+|+|.+.++ .+|.+.-.+............... ..++.|.|+|.+.++ .||.|.-++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 46789999999987766 778776666532111111111112 478999999987766 569998887644
Q ss_pred CceeEE------e-eeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCc------eeeEec-cCCCCeEEEEECCCCCE
Q psy12697 353 GQCEQQ------F-SFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDK------PVKSFE-GHTNEVNAIKWDPQGLL 418 (602)
Q Consensus 353 ~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~------~~~~~~-~~~~~i~~~~~~~~~~~ 418 (602)
.....- + ...-..+..+.+.|++.|.+.. ++.++-....+.. ....+- ..-..-+.+.|.|++.+
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l 195 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTL 195 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcE
Confidence 221110 0 1111356788889999988888 8886543332211 011111 22223455778999887
Q ss_pred EEEEECCCeE
Q psy12697 419 LASCSDDMTL 428 (602)
Q Consensus 419 l~~~~~dg~i 428 (602)
.++. +|.+
T Consensus 196 ~~v~--~g~~ 203 (236)
T 1tl2_A 196 FGVQ--GGKF 203 (236)
T ss_dssp EEEE--TTEE
T ss_pred EEEe--CCeE
Confidence 7766 6643
No 325
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.87 E-value=0.067 Score=49.08 Aligned_cols=143 Identities=14% Similarity=0.160 Sum_probs=76.0
Q ss_pred CCCeEEEEeCC-----CeEEEEcCCCcceeeccc---ccCCeEEEEEccCCCEEEEEecC-----CcEEEEeCCCCceeE
Q psy12697 291 NGSFLATGSYD-----GYARIWTSDGSLKSTLGQ---HKGPIFALKWNKRGNYILSAGVD-----KTTIIWDAASGQCEQ 357 (602)
Q Consensus 291 ~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~~~~ 357 (602)
++++++.|+.+ ..+.+||.....-..+.. ....-..+. -+++.++.|+.+ ..+.+||..+.+...
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 56777777654 368888876543332221 111111222 256666777654 468889988876544
Q ss_pred EeeeccCC-eeeeeccCCCeEEEeeCC-----CeEEEEEcCCCceeeE--eccCCCCeEEEEECCCCCEEEEEECC----
Q psy12697 358 QFSFHSAP-ALDVDWQSNTSFASCSTD-----QHIHVCKLHSDKPVKS--FEGHTNEVNAIKWDPQGLLLASCSDD---- 425 (602)
Q Consensus 358 ~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d---- 425 (602)
.-...... -..+....+..++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+.+
T Consensus 190 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~ 267 (301)
T 2vpj_A 190 VTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSL 267 (301)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSB
T ss_pred CCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcc
Confidence 32211111 112233345556677654 4689999987653222 1111111222333 56777777755
Q ss_pred -CeEEEEeCCCCe
Q psy12697 426 -MTLKIWSLDKDN 437 (602)
Q Consensus 426 -g~i~iwd~~~~~ 437 (602)
..+.+||+.+.+
T Consensus 268 ~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 268 LSSIECYDPIIDS 280 (301)
T ss_dssp EEEEEEEETTTTE
T ss_pred cccEEEEcCCCCe
Confidence 357788887653
No 326
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.85 E-value=0.11 Score=47.55 Aligned_cols=224 Identities=12% Similarity=0.094 Sum_probs=106.0
Q ss_pred CCeEEEEeCC----CeEEEEcCCCcceeecccccCC--eEEEEEccCCCEEEEEecC-----CcEEEEeCCCCceeEEee
Q psy12697 292 GSFLATGSYD----GYARIWTSDGSLKSTLGQHKGP--IFALKWNKRGNYILSAGVD-----KTTIIWDAASGQCEQQFS 360 (602)
Q Consensus 292 ~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~ 360 (602)
+.+++.|+.+ ..+..||........+.....+ -.++.. -++..++.|+.+ ..+.+||..+.+....-.
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 3455556543 3577788765443333211111 011222 256666677654 358889988776443322
Q ss_pred eccCC-eeeeeccCCCeEEEeeCCC-----eEEEEEcCCCceeeE--eccCCCCeEEEEECCCCCEEEEEECC-------
Q psy12697 361 FHSAP-ALDVDWQSNTSFASCSTDQ-----HIHVCKLHSDKPVKS--FEGHTNEVNAIKWDPQGLLLASCSDD------- 425 (602)
Q Consensus 361 ~~~~~-~~~~~~~~~~~~~~~~~~~-----~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d------- 425 (602)
..... -..++...+..++.|+.++ .+.+||..+.+-... +.........+.+ ++++++.|+.+
T Consensus 95 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 95 MRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCL 172 (302)
T ss_dssp CSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEEC
T ss_pred CCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccc
Confidence 21111 1222233455566776543 577888877643221 1111111222222 55666666542
Q ss_pred CeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCC----
Q psy12697 426 MTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVD---- 501 (602)
Q Consensus 426 g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d---- 501 (602)
..+.+||+.+.+-... .. .|. .......+. -++++++.|+.+
T Consensus 173 ~~~~~yd~~~~~W~~~-~~----------~p~---------------------~r~~~~~~~--~~~~iyv~GG~~~~~~ 218 (302)
T 2xn4_A 173 STVECYNATTNEWTYI-AE----------MST---------------------RRSGAGVGV--LNNLLYAVGGHDGPLV 218 (302)
T ss_dssp CCEEEEETTTTEEEEE-CC----------CSS---------------------CCBSCEEEE--ETTEEEEECCBSSSSB
T ss_pred cEEEEEeCCCCcEEEC-CC----------Ccc---------------------ccccccEEE--ECCEEEEECCCCCCcc
Confidence 3467777765432111 00 000 000111111 256777777764
Q ss_pred -CeEEEEeCCCCceeeeecccCCCe-eEeeecCCc-eEEEeeCCC-----cEEEeecCCC
Q psy12697 502 -KTTIIWDAASGQCEQQFSFHSAPA-LDVDWQSNT-SFASCSTDQ-----HIHVCKLHSD 553 (602)
Q Consensus 502 -g~i~iwd~~~~~~~~~~~~~~~~v-~~~~~s~~~-~l~~~~~d~-----~i~iw~~~~~ 553 (602)
..+.+||+.+.+-...-....... .+++.. ++ .++.|+.++ .+.+||+.+.
T Consensus 219 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 219 RKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV-NGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred cceEEEEeCCCCCEeeCCCCCCccccCeEEEE-CCEEEEECCcCCCcccccEEEEcCCCC
Confidence 368999998765432211111111 112222 45 666676553 4788887654
No 327
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=96.82 E-value=4.3e-05 Score=52.80 Aligned_cols=60 Identities=22% Similarity=0.324 Sum_probs=44.0
Q ss_pred cchhhhhhhhhhhcCceeeeeccccccCCccCCC-----CCCcCCchhHHHHHHhhceeEEEeee
Q psy12697 6 DEVNFLVYRYLQESGFQHSAYTFGIESHISQSNI-----DGALVPPAALLSIIQKGLQYTEAEIS 65 (602)
Q Consensus 6 ~e~n~li~ryL~e~g~~~~a~~~~~e~~~~~~~~-----~~~~~~~~~li~~~qk~l~~~~~e~~ 65 (602)
+|||..|..||..+||..++.+|.+|..++.+.. .+-.-+.+.=|-.|||.++-.|.+..
T Consensus 11 eEL~kaI~~YL~~~~~~~~~~alr~e~~~~~~~~~~~ky~gLLEKKWTSViRLQKKImdLE~~~~ 75 (88)
T 1uuj_A 11 DELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLN 75 (88)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTTCCCCHHHHHHHTTHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHhcCCCCchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999987764311 11122333445788999887664443
No 328
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.80 E-value=0.32 Score=45.11 Aligned_cols=106 Identities=15% Similarity=0.190 Sum_probs=65.2
Q ss_pred cCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEE--e----eeccCCeeeeeccCC----CeEEEe---eCCCeEE
Q psy12697 321 KGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ--F----SFHSAPALDVDWQSN----TSFASC---STDQHIH 387 (602)
Q Consensus 321 ~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~--~----~~~~~~~~~~~~~~~----~~~~~~---~~~~~i~ 387 (602)
-...+.|+|.|+|+.+++--..|.|++++..+++.... + .........++++|+ +.+.+. ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 34578999999998666665589999998766654221 1 112445778899884 555443 2455666
Q ss_pred EEEcCCC----------cee-eEec-cCCCCeEEEEECCCCCEEEEEECCC
Q psy12697 388 VCKLHSD----------KPV-KSFE-GHTNEVNAIKWDPQGLLLASCSDDM 426 (602)
Q Consensus 388 i~d~~~~----------~~~-~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg 426 (602)
-|.+..+ +.+ ..+. ........|.|.|||.+.++.++.+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~ 161 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESG 161 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTT
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCC
Confidence 6766542 111 1121 1122346799999998877766544
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.77 E-value=0.2 Score=46.05 Aligned_cols=140 Identities=6% Similarity=0.005 Sum_probs=71.3
Q ss_pred CeEEEEeCC--CeEEEEcCCCcceeecccc---cCCeEEEEEccCCCEEEEEecC----CcEEEEeCCCCceeEEeeecc
Q psy12697 293 SFLATGSYD--GYARIWTSDGSLKSTLGQH---KGPIFALKWNKRGNYILSAGVD----KTTIIWDAASGQCEQQFSFHS 363 (602)
Q Consensus 293 ~~l~~~~~d--g~i~i~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~d----g~i~~wd~~~~~~~~~~~~~~ 363 (602)
.+++.|+.+ ..+..||.....-..+... ......+. -++..++.|+.+ ..+.+||..+.+....-....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 345556543 5688888765443333211 11112222 256666777654 578889988876544322221
Q ss_pred CC-eeeeeccCCCeEEEeeCC------CeEEEEEcCCCceeeE--eccCCCCeEEEEECCCCCEEEEEEC---------C
Q psy12697 364 AP-ALDVDWQSNTSFASCSTD------QHIHVCKLHSDKPVKS--FEGHTNEVNAIKWDPQGLLLASCSD---------D 425 (602)
Q Consensus 364 ~~-~~~~~~~~~~~~~~~~~~------~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~---------d 425 (602)
.. -..++...+..++.|+.+ ..+.+||..+.+-... +......-..+.+ ++++++.|+. -
T Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 91 PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEEC
T ss_pred cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCccccc
Confidence 11 112223345556677654 4688999887653221 1111111122222 5666666653 2
Q ss_pred CeEEEEeCCCC
Q psy12697 426 MTLKIWSLDKD 436 (602)
Q Consensus 426 g~i~iwd~~~~ 436 (602)
..+.+||+.+.
T Consensus 169 ~~~~~yd~~~~ 179 (306)
T 3ii7_A 169 NSCEVYDPATE 179 (306)
T ss_dssp CCEEEEETTTT
T ss_pred ceEEEeCCCCC
Confidence 34777777664
No 330
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.76 E-value=0.46 Score=46.32 Aligned_cols=104 Identities=13% Similarity=0.182 Sum_probs=62.3
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeee--------ccCCeeeeeccC----CCeEEEeeC-------
Q psy12697 322 GPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF--------HSAPALDVDWQS----NTSFASCST------- 382 (602)
Q Consensus 322 ~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~--------~~~~~~~~~~~~----~~~~~~~~~------- 382 (602)
.....|+|.|+|+.+++-...+.|.+++..+++....... .......++++| ++.+.++..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3567999999998666654445788888665554322211 234566889998 566555442
Q ss_pred ------CCeEEEEEcCCC-------ceee-Eec-cCCCCeEEEEECCCCCEEEEEECC
Q psy12697 383 ------DQHIHVCKLHSD-------KPVK-SFE-GHTNEVNAIKWDPQGLLLASCSDD 425 (602)
Q Consensus 383 ------~~~i~i~d~~~~-------~~~~-~~~-~~~~~i~~~~~~~~~~~l~~~~~d 425 (602)
...|.-++.... +.+. .+. ........|+|.|||.+.++.++.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~ 164 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQ 164 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCT
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCC
Confidence 235655655332 1111 122 112347899999999887776654
No 331
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.73 E-value=0.12 Score=56.58 Aligned_cols=259 Identities=11% Similarity=0.122 Sum_probs=147.4
Q ss_pred cceeeeecccceeeeeeeccCCceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCCC
Q psy12697 120 LTLPLWDVERGECLNTLTRHTEPVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNPP 199 (602)
Q Consensus 120 ~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (602)
.+|.|.|+..+..+.+-. -.--+.-.+|..+.||--. ..++.|+|+++...+.++..+.
T Consensus 48 ~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e----------------- 106 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD----------------- 106 (1630)
T ss_pred ceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-----------------
Confidence 478888988765442211 1111234577777776654 7899999999988876655333
Q ss_pred CCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCC
Q psy12697 200 ESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPS 279 (602)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (602)
+|.--.|-.+. .|+..+ +..|.-|++...... ...+.++.. . .
T Consensus 107 ------------------------~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P----~k~fdR~~~-----L--~ 149 (1630)
T 1xi4_A 107 ------------------------DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQP----VKMFDRHSS-----L--A 149 (1630)
T ss_pred ------------------------CceEEEecCCC-eeEEEc-CCeEEEeccCCCCcc----HHHHhcchh-----c--c
Confidence 34444554333 233332 356999999652211 111111100 0 1
Q ss_pred CCceeEEeeCCCCCeEEEEe-------CCCeEEEEcCCCcceeecccccCCeEEEEEcc--C-CCEEEEEec---CCcEE
Q psy12697 280 NKDVTSLDWNNNGSFLATGS-------YDGYARIWTSDGSLKSTLGQHKGPIFALKWNK--R-GNYILSAGV---DKTTI 346 (602)
Q Consensus 280 ~~~i~~~~~~~~~~~l~~~~-------~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~--~-~~~l~~~~~---dg~i~ 346 (602)
+..|..-..+++.++++..+ -.|.+.+|..+.+..+.+.+|.+....+.... . ...+..+.. .+.+.
T Consensus 150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLh 229 (1630)
T 1xi4_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (1630)
T ss_pred cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEE
Confidence 35677778888888877543 34889999998888888888877665555431 1 223332222 36888
Q ss_pred EEeCCCC-ceeEEe-------eec----cCCeeeeeccC-CCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEEC
Q psy12697 347 IWDAASG-QCEQQF-------SFH----SAPALDVDWQS-NTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWD 413 (602)
Q Consensus 347 ~wd~~~~-~~~~~~-------~~~----~~~~~~~~~~~-~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 413 (602)
+.++... .....+ ... ..-...+..++ .+.+...+.-|.++++|+.++..+..-+-....|...+.+
T Consensus 230 i~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~ 309 (1630)
T 1xi4_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPH 309 (1630)
T ss_pred EEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccC
Confidence 8887543 100111 011 11122233333 3667888999999999999998876555444555544444
Q ss_pred CCCCEEEEEECCCeEEEEeCCCC
Q psy12697 414 PQGLLLASCSDDMTLKIWSLDKD 436 (602)
Q Consensus 414 ~~~~~l~~~~~dg~i~iwd~~~~ 436 (602)
....-++.....|.|.--.+...
T Consensus 310 ~~~~g~~~vnr~G~vl~v~v~~~ 332 (1630)
T 1xi4_A 310 EATAGIIGVNRKGQVLSVCVEEE 332 (1630)
T ss_pred CCCCceEEEcCCceEEEEEEccc
Confidence 43333444445665555554443
No 332
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.66 E-value=0.17 Score=55.49 Aligned_cols=266 Identities=12% Similarity=0.151 Sum_probs=147.9
Q ss_pred CCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCCCcceeecccccC
Q psy12697 243 DSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKG 322 (602)
Q Consensus 243 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~ 322 (602)
...|.|-|+.++......+ -..-+.-.+|..+.+|.-. ...+.++|++.+....-.....
T Consensus 47 ~~~vvIidl~~~~~~~rrp-------------------i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e 106 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP-------------------ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD 106 (1630)
T ss_pred CceEEEEECCCCCCccccc-------------------ccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC
Confidence 3478888887765432111 1123344677777666654 6789999987543333223345
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEeCCCC-ceeEEeeec----cCCeeeeeccCCCe--EEEee------CCCeEEEE
Q psy12697 323 PIFALKWNKRGNYILSAGVDKTTIIWDAASG-QCEQQFSFH----SAPALDVDWQSNTS--FASCS------TDQHIHVC 389 (602)
Q Consensus 323 ~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~------~~~~i~i~ 389 (602)
+|.--.|-.+. .|+-.+ +..|.-|++... .+.+.+..| ...|..-..+++.. +++|- -.|.+.+|
T Consensus 107 ~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLy 184 (1630)
T 1xi4_A 107 DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (1630)
T ss_pred CceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeee
Confidence 67777776543 344443 457999999642 233333222 23344444444433 22322 35788888
Q ss_pred EcCCCceeeEeccCCCCeEEEEEC--CC-CCEEEEEEC---CCeEEEEeCCCC-eeeEeeccccccEEEEEECCCCCCCC
Q psy12697 390 KLHSDKPVKSFEGHTNEVNAIKWD--PQ-GLLLASCSD---DMTLKIWSLDKD-NCVHDLQAHNKEIYTIKWSPTGPETS 462 (602)
Q Consensus 390 d~~~~~~~~~~~~~~~~i~~~~~~--~~-~~~l~~~~~---dg~i~iwd~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~ 462 (602)
....+. .+.+.||......+.+. +. ..+++.+.. .+.++|-++... ..- .........+-|.|+.
T Consensus 185 S~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~---~~f~kk~~~~~~~~~~---- 256 (1630)
T 1xi4_A 185 SVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN---QPFPKKAVDVFFPPEA---- 256 (1630)
T ss_pred eccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCC---CCCccccccccCCccc----
Confidence 876543 34456665544333332 11 223332222 267888887542 110 1111223333444432
Q ss_pred CCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecccCCCeeEeeecCCc-eEEEeeC
Q psy12697 463 NPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCST 541 (602)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~~ 541 (602)
...-..++..|+.-..+.....-|.|.++|++++.++..-+-...+|...+-.... -++....
T Consensus 257 ----------------~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr 320 (1630)
T 1xi4_A 257 ----------------QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNR 320 (1630)
T ss_pred ----------------ccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcC
Confidence 12233467777777778888899999999999999987666556666655554433 4555557
Q ss_pred CCcEEEeecCCCC
Q psy12697 542 DQHIHVCKLHSDK 554 (602)
Q Consensus 542 d~~i~iw~~~~~~ 554 (602)
.|.|.--.+....
T Consensus 321 ~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 321 KGQVLSVCVEEEN 333 (1630)
T ss_pred CceEEEEEEccch
Confidence 7776666655443
No 333
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.65 E-value=0.26 Score=45.27 Aligned_cols=144 Identities=13% Similarity=0.080 Sum_probs=71.4
Q ss_pred CCCCeEEEEeCC----CeEEEEcCCCcceeecccccCC--eEEEEEccCCCEEEEEec----C-----CcEEEEeCCCCc
Q psy12697 290 NNGSFLATGSYD----GYARIWTSDGSLKSTLGQHKGP--IFALKWNKRGNYILSAGV----D-----KTTIIWDAASGQ 354 (602)
Q Consensus 290 ~~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~l~~~~~----d-----g~i~~wd~~~~~ 354 (602)
-++.+++.|+.+ ..+.+||.....-..+.....+ -.+++. -++..++.|+. + ..+.+||..+.+
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 355677777642 3688888765444333211111 012222 25566666665 2 468889988775
Q ss_pred eeEEeeeccCC-eeeeeccCCCeEEEeeCC-----CeEEEEEcCCCceee--EeccCCCCeEEEEECCCCCEEEEEECC-
Q psy12697 355 CEQQFSFHSAP-ALDVDWQSNTSFASCSTD-----QHIHVCKLHSDKPVK--SFEGHTNEVNAIKWDPQGLLLASCSDD- 425 (602)
Q Consensus 355 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d- 425 (602)
....-...... -..++...+..++.|+.+ ..+.+||..+.+-.. .+......-..+.+ ++++++.|+.+
T Consensus 102 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 179 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDG 179 (308)
T ss_dssp EEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCC
Confidence 44322211111 112222344556666533 468888887764221 11111111222223 56677777654
Q ss_pred ----CeEEEEeCCCC
Q psy12697 426 ----MTLKIWSLDKD 436 (602)
Q Consensus 426 ----g~i~iwd~~~~ 436 (602)
..+.+||+.+.
T Consensus 180 ~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 180 TNRLNSAECYYPERN 194 (308)
T ss_dssp SCBCCCEEEEETTTT
T ss_pred CCcCceEEEEeCCCC
Confidence 34677776654
No 334
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.63 E-value=0.42 Score=44.06 Aligned_cols=138 Identities=9% Similarity=0.008 Sum_probs=68.4
Q ss_pred EEEEeCCCeEEEEcCCCcceee--cccccCCeEEEEEccCCCEEEEEec----C-------CcEEEEeCCCCceeEEeee
Q psy12697 295 LATGSYDGYARIWTSDGSLKST--LGQHKGPIFALKWNKRGNYILSAGV----D-------KTTIIWDAASGQCEQQFSF 361 (602)
Q Consensus 295 l~~~~~dg~i~i~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~----d-------g~i~~wd~~~~~~~~~~~~ 361 (602)
++.|+ ..+..||.....-.. +..............++..++.|+. + ..+..||..+.+....-..
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 44454 568888876544322 1111122233333456777777773 1 1277889887765332111
Q ss_pred ccCC-eeeeeccCCCeEEEeeCC--------CeEEEEEcCCCceee--EeccCCCCeEEEEECCCCCEEEEEEC-C----
Q psy12697 362 HSAP-ALDVDWQSNTSFASCSTD--------QHIHVCKLHSDKPVK--SFEGHTNEVNAIKWDPQGLLLASCSD-D---- 425 (602)
Q Consensus 362 ~~~~-~~~~~~~~~~~~~~~~~~--------~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~-d---- 425 (602)
.... -..++...+..++.|+.+ ..+.+||..+.+-.. .+......-..+. .++++++.|+. +
T Consensus 86 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~ 163 (315)
T 4asc_A 86 PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKC 163 (315)
T ss_dssp SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCB
T ss_pred CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcc
Confidence 1111 112223344556666632 458889988764221 1111111112222 35667777765 2
Q ss_pred -CeEEEEeCCCC
Q psy12697 426 -MTLKIWSLDKD 436 (602)
Q Consensus 426 -g~i~iwd~~~~ 436 (602)
..+.+||..+.
T Consensus 164 ~~~~~~yd~~~~ 175 (315)
T 4asc_A 164 LNKMCVYDPKKF 175 (315)
T ss_dssp CCCEEEEETTTT
T ss_pred cceEEEEeCCCC
Confidence 35777777654
No 335
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.62 E-value=0.15 Score=47.04 Aligned_cols=143 Identities=11% Similarity=0.084 Sum_probs=82.9
Q ss_pred CeEEEEeCCCeEEEEcCC-Ccceeecccc-cCCeEEEEE--ccCCCEEEEE--ecCCcEEEEeCCCCceeEEeeec----
Q psy12697 293 SFLATGSYDGYARIWTSD-GSLKSTLGQH-KGPIFALKW--NKRGNYILSA--GVDKTTIIWDAASGQCEQQFSFH---- 362 (602)
Q Consensus 293 ~~l~~~~~dg~i~i~~~~-~~~~~~~~~~-~~~i~~~~~--~~~~~~l~~~--~~dg~i~~wd~~~~~~~~~~~~~---- 362 (602)
..+++++.||.|.-+|.. |+..-.+... ..++....- .+.+..++.+ +.||.+..++..+|.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 368888999999999864 6655555433 122222110 0112244444 58999999999988655444321
Q ss_pred cCCeee---e------eccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCC--C-----eEEEEEC-----CCCCEEEE
Q psy12697 363 SAPALD---V------DWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTN--E-----VNAIKWD-----PQGLLLAS 421 (602)
Q Consensus 363 ~~~~~~---~------~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~--~-----i~~~~~~-----~~~~~l~~ 421 (602)
..++.. . ..+.++.+++++.+|.+...|+.+|+.+.++..... . ..|.... ..+..|+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 111111 0 002577899999999999999999999988864321 0 0111111 12356777
Q ss_pred EECCCeEEEEeCCCC
Q psy12697 422 CSDDMTLKIWSLDKD 436 (602)
Q Consensus 422 ~~~dg~i~iwd~~~~ 436 (602)
+..+..+.+.+ +++
T Consensus 171 g~~~y~v~~~~-~sG 184 (339)
T 2be1_A 171 GKTIFELGIHS-YDG 184 (339)
T ss_dssp EEEEEECEECC-TTS
T ss_pred ecceEEEEEEC-CCC
Confidence 77777777766 444
No 336
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.58 E-value=0.2 Score=46.06 Aligned_cols=142 Identities=6% Similarity=0.015 Sum_probs=73.5
Q ss_pred CCCeEEEEeCC----CeEEEEcCCCcceeecccc---cCCeEEEEEccCCCEEEEEecC------CcEEEEeCCCCceeE
Q psy12697 291 NGSFLATGSYD----GYARIWTSDGSLKSTLGQH---KGPIFALKWNKRGNYILSAGVD------KTTIIWDAASGQCEQ 357 (602)
Q Consensus 291 ~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~d------g~i~~wd~~~~~~~~ 357 (602)
++.+++.|+.+ ..+.+||........+... ......+. -+++.++.|+.+ ..+.+||..+.+...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56677777755 5788888775433332211 11112222 256666777655 468899988876544
Q ss_pred EeeeccCC-eeeeeccCCCeEEEeeC---------CCeEEEEEcCCCceeeE--eccCCCCeEEEEECCCCCEEEEEECC
Q psy12697 358 QFSFHSAP-ALDVDWQSNTSFASCST---------DQHIHVCKLHSDKPVKS--FEGHTNEVNAIKWDPQGLLLASCSDD 425 (602)
Q Consensus 358 ~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d 425 (602)
.-...... -..+....+..++.|+. -..+.+||..+.+-... +......-..+.+ ++++++.|+.+
T Consensus 133 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 210 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQN 210 (306)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEE
T ss_pred CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCC
Confidence 32211111 11222334445566653 34588999887643221 1111111222222 56677776643
Q ss_pred -----CeEEEEeCCCC
Q psy12697 426 -----MTLKIWSLDKD 436 (602)
Q Consensus 426 -----g~i~iwd~~~~ 436 (602)
..+.+||+.+.
T Consensus 211 ~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLN 226 (306)
T ss_dssp TTEEBCCEEEEETTTT
T ss_pred CCCCCceEEEeeCCCC
Confidence 34777777664
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.41 E-value=0.26 Score=41.75 Aligned_cols=148 Identities=8% Similarity=-0.060 Sum_probs=81.9
Q ss_pred CCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCC--------eEEEEECCCCCEEEEEECCCeEEEEeCCC
Q psy12697 364 APALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNE--------VNAIKWDPQGLLLASCSDDMTLKIWSLDK 435 (602)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 435 (602)
..+..++++|++.+.+. .+|.++-.+..+.....-+. .... -.++.|+|+|.+.++ .||.|+-++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~-s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMG-RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHH-HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccc-cccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 36778999999888777 88888777765532211111 1112 378999999988887 559888777543
Q ss_pred CeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee
Q psy12697 436 DNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE 515 (602)
Q Consensus 436 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 515 (602)
...-.-+.. ...| -...-..+..+.|.|+|.+.+.. |+.++-+...++...
T Consensus 117 ~~~~~Wl~~-a~~v--------------------------g~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~ 167 (236)
T 1tl2_A 117 SDTDNWIAR-ATEV--------------------------GSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQD 167 (236)
T ss_dssp STTCCHHHH-SEEE--------------------------ECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTC
T ss_pred CCCCceecc-ccEe--------------------------ccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCc
Confidence 211100000 0000 00112456788888898877776 777654444322211
Q ss_pred -----eee-c-ccCCCeeEeeecCCceEEEeeCCCcE
Q psy12697 516 -----QQF-S-FHSAPALDVDWQSNTSFASCSTDQHI 545 (602)
Q Consensus 516 -----~~~-~-~~~~~v~~~~~s~~~~l~~~~~d~~i 545 (602)
.+. - ..-..-.-+.|.|++.|.... ++.+
T Consensus 168 ~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~-~g~~ 203 (236)
T 1tl2_A 168 NWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ-GGKF 203 (236)
T ss_dssp CHHHHCEEEESSSGGGEEEEEECTTSCEEEEE-TTEE
T ss_pred ccccccceeccCCcceEEEEEECCCCcEEEEe-CCeE
Confidence 111 1 112233446689999444444 6633
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.35 E-value=0.59 Score=43.08 Aligned_cols=140 Identities=9% Similarity=0.007 Sum_probs=66.3
Q ss_pred eEEEEeCCCeEEEEcCCCcceeec--ccccCCeEEEEEccCCCEEEEEec----CC-------cEEEEeCCCCceeEEee
Q psy12697 294 FLATGSYDGYARIWTSDGSLKSTL--GQHKGPIFALKWNKRGNYILSAGV----DK-------TTIIWDAASGQCEQQFS 360 (602)
Q Consensus 294 ~l~~~~~dg~i~i~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~----dg-------~i~~wd~~~~~~~~~~~ 360 (602)
.++.|+. .+..||.....-... ..............++..++.|+. ++ .+..||..+.+....-.
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 3444443 377888764433221 111112222333456777777773 12 17788888776543221
Q ss_pred eccC-CeeeeeccCCCeEEEeeCC-------CeEEEEEcCCCceeeEeccCCCCe-EEEEECCCCCEEEEEECC------
Q psy12697 361 FHSA-PALDVDWQSNTSFASCSTD-------QHIHVCKLHSDKPVKSFEGHTNEV-NAIKWDPQGLLLASCSDD------ 425 (602)
Q Consensus 361 ~~~~-~~~~~~~~~~~~~~~~~~~-------~~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~d------ 425 (602)
.... .-..++...+..++.|+.+ ..+.+||..+.+-...-....... .+++. .++++++.|+.+
T Consensus 96 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~ 174 (318)
T 2woz_A 96 LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCT 174 (318)
T ss_dssp BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBC
T ss_pred CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCcc
Confidence 1111 1122233345566677653 357888887764322111111100 11122 356676776542
Q ss_pred CeEEEEeCCCC
Q psy12697 426 MTLKIWSLDKD 436 (602)
Q Consensus 426 g~i~iwd~~~~ 436 (602)
..+.+||+.+.
T Consensus 175 ~~~~~yd~~~~ 185 (318)
T 2woz_A 175 NRVFIYNPKKG 185 (318)
T ss_dssp CCEEEEETTTT
T ss_pred ceEEEEcCCCC
Confidence 34777887664
No 339
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.27 E-value=0.33 Score=44.43 Aligned_cols=92 Identities=13% Similarity=0.162 Sum_probs=46.3
Q ss_pred CcEEEEeCCCCceeEEeeeccCC-eeeeeccCCCeEEEeeCC-----CeEEEEEcCCCceeeE--eccCCCCeEEEEECC
Q psy12697 343 KTTIIWDAASGQCEQQFSFHSAP-ALDVDWQSNTSFASCSTD-----QHIHVCKLHSDKPVKS--FEGHTNEVNAIKWDP 414 (602)
Q Consensus 343 g~i~~wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~ 414 (602)
..+..||..+.+....-...... -..++...+..++.|+.+ ..+.+||..+.+-... +......-..+.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-- 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL-- 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--
Confidence 35778888776543321111111 112233345556677654 3588899877652221 1111111222222
Q ss_pred CCCEEEEEECCC-----eEEEEeCCCC
Q psy12697 415 QGLLLASCSDDM-----TLKIWSLDKD 436 (602)
Q Consensus 415 ~~~~l~~~~~dg-----~i~iwd~~~~ 436 (602)
++++++.|+.++ .+.+||+.+.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~ 134 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSN 134 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCC
Confidence 567777777553 4667776654
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.09 E-value=0.68 Score=42.60 Aligned_cols=143 Identities=8% Similarity=0.046 Sum_probs=73.5
Q ss_pred CCCeEEEEeCC--------CeEEEEcCCCcceeecccccCC-e-EEEEEccCCCEEEEEec-C-----CcEEEEeCCCCc
Q psy12697 291 NGSFLATGSYD--------GYARIWTSDGSLKSTLGQHKGP-I-FALKWNKRGNYILSAGV-D-----KTTIIWDAASGQ 354 (602)
Q Consensus 291 ~~~~l~~~~~d--------g~i~i~~~~~~~~~~~~~~~~~-i-~~~~~~~~~~~l~~~~~-d-----g~i~~wd~~~~~ 354 (602)
+++.++.|+.+ ..+.+||.....-..+.....+ . .+++ .-+++.++.|+. + ..+.+||..+.+
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVL-SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEE-EECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 56677777642 4588888775433333221111 1 1122 235566667765 2 468899988775
Q ss_pred eeEEeeeccCC-eeeeeccCCCeEEEeeCCC-----eEEEEEcCCCceeeE--eccCCCCeEEEEECCCCCEEEEEECCC
Q psy12697 355 CEQQFSFHSAP-ALDVDWQSNTSFASCSTDQ-----HIHVCKLHSDKPVKS--FEGHTNEVNAIKWDPQGLLLASCSDDM 426 (602)
Q Consensus 355 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg 426 (602)
....-...... -..+....+..++.|+.++ .+.+||+.+.+-... +.........+.+ ++++++.|+.++
T Consensus 177 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~ 254 (315)
T 4asc_A 177 WKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFAT 254 (315)
T ss_dssp EEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEE
T ss_pred EEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCccc
Confidence 44322211111 1122333455677776544 588899887643221 1111111222333 567777777642
Q ss_pred --------------eEEEEeCCCC
Q psy12697 427 --------------TLKIWSLDKD 436 (602)
Q Consensus 427 --------------~i~iwd~~~~ 436 (602)
.+.+||+.+.
T Consensus 255 ~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 255 LETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EECTTSCEEEEEEEEEEEEETTTT
T ss_pred cCcCCccccccccCcEEEecCCCC
Confidence 3667777654
No 341
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.04 E-value=0.3 Score=44.85 Aligned_cols=61 Identities=10% Similarity=0.103 Sum_probs=34.6
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCCceeee--ecccCCCeeEeeecCCc-eEEEeeCC-----CcEEEeecCCC
Q psy12697 491 RGNYILSAGVD-----KTTIIWDAASGQCEQQ--FSFHSAPALDVDWQSNT-SFASCSTD-----QHIHVCKLHSD 553 (602)
Q Consensus 491 ~~~~l~s~~~d-----g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~s~~~-~l~~~~~d-----~~i~iw~~~~~ 553 (602)
++++++.|+.+ ..+.+||+.+.+-... +....... +++.. ++ .++.|+.+ ..+.+||+.+.
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGA-GVCVL-HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccc-eEEEE-CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 56777777654 4588999877653322 11111111 22222 45 66677654 56888888765
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.63 E-value=0.91 Score=42.61 Aligned_cols=91 Identities=7% Similarity=0.004 Sum_probs=44.9
Q ss_pred CCCeEEEEeCC-CeEEEEcCCC--cceeeccccc----CCeEEEEEccCCCEEEEEec-C---------CcEEEEeCCCC
Q psy12697 291 NGSFLATGSYD-GYARIWTSDG--SLKSTLGQHK----GPIFALKWNKRGNYILSAGV-D---------KTTIIWDAASG 353 (602)
Q Consensus 291 ~~~~l~~~~~d-g~i~i~~~~~--~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~-d---------g~i~~wd~~~~ 353 (602)
++++++.|+.+ ..+.+||... ..-..+.... ..-..+. -+++.++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF--IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE--ETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE--ECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 56666666544 4688888752 2222222111 1112222 25666666665 2 46888998887
Q ss_pred ceeEEeeec-cCC-eeeeeccCCCeEEEeeCC
Q psy12697 354 QCEQQFSFH-SAP-ALDVDWQSNTSFASCSTD 383 (602)
Q Consensus 354 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~ 383 (602)
+....-... ... -..+....+..++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 654432222 111 112223445556777654
No 343
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.19 E-value=1.9 Score=39.62 Aligned_cols=143 Identities=10% Similarity=0.122 Sum_probs=72.0
Q ss_pred CCCeEEEEeCC-------CeEEEEcCCCcceeecccccCCeE--EEEEccCCCEEEEEec------CCcEEEEeCCCCce
Q psy12697 291 NGSFLATGSYD-------GYARIWTSDGSLKSTLGQHKGPIF--ALKWNKRGNYILSAGV------DKTTIIWDAASGQC 355 (602)
Q Consensus 291 ~~~~l~~~~~d-------g~i~i~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~l~~~~~------dg~i~~wd~~~~~~ 355 (602)
++++++.|+.+ ..+.+||.....-..+.....+.. ++.. .+++.++.|+. -..+.+||..+.+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 56677777754 357788876544333322111111 1122 35666666654 24588999988765
Q ss_pred eEEeeeccCC-eeeeeccCCCeEEEeeCC-----CeEEEEEcCCCceee--EeccCCCCeEEEEECCCCCEEEEEECC--
Q psy12697 356 EQQFSFHSAP-ALDVDWQSNTSFASCSTD-----QHIHVCKLHSDKPVK--SFEGHTNEVNAIKWDPQGLLLASCSDD-- 425 (602)
Q Consensus 356 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d-- 425 (602)
...-...... ...++...+..++.|+.+ ..+.+||+.+.+-.. .+.........+.+ ++++++.|+.+
T Consensus 188 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 265 (318)
T 2woz_A 188 KDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGSLYAIGGFAMI 265 (318)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTEEEEECCBCCB
T ss_pred EECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCEEEEECCeecc
Confidence 4332211111 112333445556666543 357788987764222 11111111222222 46677777653
Q ss_pred ------------CeEEEEeCCCC
Q psy12697 426 ------------MTLKIWSLDKD 436 (602)
Q Consensus 426 ------------g~i~iwd~~~~ 436 (602)
..+.+||+.+.
T Consensus 266 ~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 266 QLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp C----CCBCCBCCCEEEEETTTT
T ss_pred CCCCceeccceeeeEEEEeCCCC
Confidence 34667776654
No 344
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.96 E-value=2.1 Score=38.94 Aligned_cols=209 Identities=9% Similarity=0.018 Sum_probs=112.0
Q ss_pred CCCCCeEEEEe--CCCeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEecC--------------CcEEEEeCCC
Q psy12697 289 NNNGSFLATGS--YDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVD--------------KTTIIWDAAS 352 (602)
Q Consensus 289 ~~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------------g~i~~wd~~~ 352 (602)
++++..++... .++.|...+.++.....+.... +--+++++++|+-+... ..|+..++..
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~----~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDT----AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEEE----EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCCc----eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 34666666654 3567777777776655554322 34557889998876543 3567777766
Q ss_pred CceeEEeeeccCCeeeeeccCCCeEEEee----CCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEEC-CCe
Q psy12697 353 GQCEQQFSFHSAPALDVDWQSNTSFASCS----TDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSD-DMT 427 (602)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~ 427 (602)
.+...... .....+.. .++.++... .+..|+..++..... ..+..+.. .+++|+++.|+-.+. ...
T Consensus 98 ~~~~~l~~---~~~~~~s~-~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~lt~~~~----~~~~~~g~~iy~t~~g~~~ 168 (302)
T 3s25_A 98 HGSTVLDP---DPCIYASL-IGNYIYYLHYDTQTATSLYRIRIDGEEK-KKIKNHYL----FTCNTSDRYFYYNNPKNGQ 168 (302)
T ss_dssp CCCEEEEC---SCEEEEEE-ETTEEEEEEESSSSCEEEEEEETTSCCC-EEEESSCC----CCSEEETTEEEEECTTTCC
T ss_pred CcceEeec---CCccEEEE-eCCEEEEEeecCCCCceEEEEECCCCCe-EEEeCCCc----eEeeEECCEEEEEeCCCce
Confidence 54322211 12222222 233444333 345666667664433 33333322 456778888886665 567
Q ss_pred EEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCC--CeEE
Q psy12697 428 LKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVD--KTTI 505 (602)
Q Consensus 428 i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~d--g~i~ 505 (602)
|...++..+.....+.. . . ...++|++++|+-...+ ..|.
T Consensus 169 Iy~~~l~g~~~~~l~~~---~----------------------------------~-~~~~~P~g~~iy~t~~~~~~~I~ 210 (302)
T 3s25_A 169 LYRYDTASQSEALFYDC---N----------------------------------C-YKPVVLDDTNVYYMDVNRDNAIV 210 (302)
T ss_dssp EEEEETTTTEEEEEECS---C----------------------------------E-EEEEEEETTEEEEEEGGGTTEEE
T ss_pred EEEEECCCCCEEEEeCC---C----------------------------------c-cceeeecCCEEEEEEcCCCcEEE
Confidence 77777765543222111 0 0 11244777888766544 3577
Q ss_pred EEeCCCCceeeeecccCCCeeEeeecCCc-eEEEee--CCCcEEEeecCCC
Q psy12697 506 IWDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCS--TDQHIHVCKLHSD 553 (602)
Q Consensus 506 iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~l~~~~--~d~~i~iw~~~~~ 553 (602)
.-++..+. ...+. ...+ ..|+|++ +|..+. ..+.|..-+++..
T Consensus 211 ~~~ldG~~-~~~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 211 HVNINNPN-PVVLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp EECSSSCC-CEECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred EEECCCCC-eEEEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 77776544 33333 2233 2367777 665442 3456666666543
No 345
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.45 E-value=2.8 Score=38.09 Aligned_cols=139 Identities=6% Similarity=0.006 Sum_probs=78.2
Q ss_pred EeeCCCCCeEEEEeCC--------------CeEEEEcCCCcceeecccccCCeEEEEEccCCCEEEEEe--c--CCcEEE
Q psy12697 286 LDWNNNGSFLATGSYD--------------GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG--V--DKTTII 347 (602)
Q Consensus 286 ~~~~~~~~~l~~~~~d--------------g~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~--dg~i~~ 347 (602)
--++++|.+|+..... ..|+..++++.....+.... ...|++++++|+-.. . ...|..
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC----EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC----ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 3456778887776543 46777788776554443222 236778888888765 2 344555
Q ss_pred EeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCC-
Q psy12697 348 WDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDM- 426 (602)
Q Consensus 348 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg- 426 (602)
.++.... ...+..+.. ..+.|.....+.+......|+..++..+.....+.+ .. ...++|++.+|+-...++
T Consensus 134 ~~~dGs~-~~~lt~~~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~-~~~~~P~g~~iy~t~~~~~ 206 (302)
T 3s25_A 134 IRIDGEE-KKKIKNHYL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NC-YKPVVLDDTNVYYMDVNRD 206 (302)
T ss_dssp EETTSCC-CEEEESSCC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---CE-EEEEEEETTEEEEEEGGGT
T ss_pred EECCCCC-eEEEeCCCc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Cc-cceeeecCCEEEEEEcCCC
Confidence 5665333 333332222 233443333344444467888888877654433332 22 234568888888766442
Q ss_pred -eEEEEeCCC
Q psy12697 427 -TLKIWSLDK 435 (602)
Q Consensus 427 -~i~iwd~~~ 435 (602)
.|..-+++.
T Consensus 207 ~~I~~~~ldG 216 (302)
T 3s25_A 207 NAIVHVNINN 216 (302)
T ss_dssp TEEEEECSSS
T ss_pred cEEEEEECCC
Confidence 455555544
No 346
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.40 E-value=1.1 Score=41.92 Aligned_cols=92 Identities=9% Similarity=0.049 Sum_probs=43.3
Q ss_pred CCCEEEEEec-CCcEEEEeCCC--CceeEEeeec--cCCeeeeeccCCCeEEEeeC-C---------CeEEEEEcCCCce
Q psy12697 332 RGNYILSAGV-DKTTIIWDAAS--GQCEQQFSFH--SAPALDVDWQSNTSFASCST-D---------QHIHVCKLHSDKP 396 (602)
Q Consensus 332 ~~~~l~~~~~-dg~i~~wd~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~---------~~i~i~d~~~~~~ 396 (602)
++..++.|+. ...+.++|..+ .+....-... ...-.+++...+..++.|+. + ..+.+||..+.+-
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 4444444443 34577888764 3222211111 11112233334555666665 2 4688899887642
Q ss_pred ee--Eec-cCCCCeEEEEECCCCCEEEEEECC
Q psy12697 397 VK--SFE-GHTNEVNAIKWDPQGLLLASCSDD 425 (602)
Q Consensus 397 ~~--~~~-~~~~~i~~~~~~~~~~~l~~~~~d 425 (602)
.. .+. .....-.++. .++++++.|+.+
T Consensus 99 ~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp EECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred EECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 22 111 1111122222 467788888764
No 347
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.65 E-value=3.8 Score=36.75 Aligned_cols=106 Identities=13% Similarity=-0.000 Sum_probs=58.3
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEEeeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEec
Q psy12697 322 GPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE 401 (602)
Q Consensus 322 ~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~ 401 (602)
..|..++... .+.+... ||.+..|-....-.+..-......+..++......++. . ||.++.|-......+-.-.
T Consensus 24 ~~i~~ia~G~--~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg~P~ 98 (282)
T 3qhy_B 24 SGVDAIAGGY--FHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTTVPA 98 (282)
T ss_dssp SSCCEEEECS--SEEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTCCCG
T ss_pred CCCcEEEeCC--CeEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCCCCc
Confidence 3566776543 3334345 89999996543221111111223455666555555555 4 8999999876532221111
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCC
Q psy12697 402 GHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDK 435 (602)
Q Consensus 402 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 435 (602)
.-...|..++...+ ..+.-. ||.|..|-...
T Consensus 99 ~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~ 129 (282)
T 3qhy_B 99 EARSGVDAIAAGAW--ASYALK-DGKVIAWGDDS 129 (282)
T ss_dssp GGSSSEEEEEEETT--EEEEEE-TTEEEEEECCT
T ss_pred ccCCCeEEEECcCC--EEEEEe-CCeEEEecCCC
Confidence 11346777776654 333334 89999997654
No 348
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.56 E-value=4 Score=36.66 Aligned_cols=223 Identities=11% Similarity=-0.004 Sum_probs=113.2
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcCC--CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCCceeEE
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ 358 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~ 358 (602)
..|..++.... ..+.-. ||.+..|-.+ +++-... .....|..++...+ +.+... ||.+..|-....-.+..
T Consensus 24 ~~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p~-~~~~~i~~ia~G~~--hs~~l~-~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 24 SGVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMPA-ATQSGVDAIAAGNY--HSLALK-DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp SSCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCCG-GGGSCCCEEEECSS--EEEEEE-TTEEEEEECCTTSTTCC
T ss_pred CCCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCCc-cCCCCEEEEEeCCC--EEEEEE-CCEEEEeeCCCCCCCCC
Confidence 35666665543 222335 8999999754 2221111 12345666665433 333334 89999996543211111
Q ss_pred eeeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCCCceeeEeccCCCCeEEEEECCCCCEEEEEECCCeEEEEeCCCCee
Q psy12697 359 FSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLDKDNC 438 (602)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 438 (602)
-......+..++......++.. +|.|+.|-......+-........|..++...+.. ++ -. ||.|..|-......
T Consensus 97 P~~~~~~v~~ia~G~~hs~al~--~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~-~~-l~-~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 97 PAEARSGVDAIAAGAWASYALK--DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTA-LA-VK-NGGVIAWGDNYFGQ 171 (282)
T ss_dssp CGGGSSSEEEEEEETTEEEEEE--TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EE-EE-TTEEEEEECCTTST
T ss_pred CcccCCCeEEEECcCCEEEEEe--CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEE-EE-EE-CCEEEEecCCCCCC
Confidence 1111235566655555445544 99999998765322211112234577776654432 22 33 79999997654221
Q ss_pred eEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeee
Q psy12697 439 VHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF 518 (602)
Q Consensus 439 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 518 (602)
+..-.. ....|..++...+. .++. .||.|+.|-....-.+..-
T Consensus 172 lg~p~~----------------------------------~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p 214 (282)
T 3qhy_B 172 TTVPAE----------------------------------AQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVP 214 (282)
T ss_dssp TSCCGG----------------------------------GGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCC
T ss_pred CCCcee----------------------------------cCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCC
Confidence 110000 01234444333222 2333 5899999965433222111
Q ss_pred cccCCCeeEeeecCCceEEEeeCCCcEEEeecCCCC
Q psy12697 519 SFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDK 554 (602)
Q Consensus 519 ~~~~~~v~~~~~s~~~~l~~~~~d~~i~iw~~~~~~ 554 (602)
......|..++...+..++.. ||.|+.|-.....
T Consensus 215 ~~~~~~v~~i~~G~~h~~al~--~g~v~~wG~n~~g 248 (282)
T 3qhy_B 215 TEALSGVSAIASGEWYSLALK--NGKVIAWGSSRTA 248 (282)
T ss_dssp GGGGSSCCEEEECSSCEEEEE--TTEEEEESTTCCC
T ss_pred cccCCCceEEEcCCCEEEEEE--CCEEEEecCCCCc
Confidence 112235777776655544444 9999999866543
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.53 E-value=4.8 Score=41.71 Aligned_cols=107 Identities=11% Similarity=0.129 Sum_probs=60.0
Q ss_pred CCCCeEEEEeCCC--eEEEEcCCCcceeeccc------ccCCeEEEEEccC-CCEEEEEec--C-----CcEEEEeCCCC
Q psy12697 290 NNGSFLATGSYDG--YARIWTSDGSLKSTLGQ------HKGPIFALKWNKR-GNYILSAGV--D-----KTTIIWDAASG 353 (602)
Q Consensus 290 ~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~------~~~~i~~~~~~~~-~~~l~~~~~--d-----g~i~~wd~~~~ 353 (602)
.++++++.|+.++ .+.+||.....-..+.. .......+.+..+ ++.++.|+. + ..+.+||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 4788888888765 68899877544433321 1112223445544 566667765 2 45889998887
Q ss_pred c------eeEEeee--ccCCeeeeeccC-CCeEEEeeC--------CCeEEEEEcCCCce
Q psy12697 354 Q------CEQQFSF--HSAPALDVDWQS-NTSFASCST--------DQHIHVCKLHSDKP 396 (602)
Q Consensus 354 ~------~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~--------~~~i~i~d~~~~~~ 396 (602)
. ....... ....-..+.... +..++.|+. ...+.+||+.+.+-
T Consensus 579 ~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 579 NATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp CSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred ccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 7 2211111 111111223334 556667764 34689999887653
No 350
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=93.45 E-value=5.6 Score=41.17 Aligned_cols=94 Identities=7% Similarity=0.031 Sum_probs=56.0
Q ss_pred cCCcEEEEeCCCCc-------eeEE-ee-eccCCeeeeeccCCCeEEEeeCCCe--EEEEEcCCCc-eeeE-eccC-CCC
Q psy12697 341 VDKTTIIWDAASGQ-------CEQQ-FS-FHSAPALDVDWQSNTSFASCSTDQH--IHVCKLHSDK-PVKS-FEGH-TNE 406 (602)
Q Consensus 341 ~dg~i~~wd~~~~~-------~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~--i~i~d~~~~~-~~~~-~~~~-~~~ 406 (602)
..+.|...|+.++. .... +. .....+..+.|..+..+++...++. +.++++.+++ .... +... .+.
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~ 397 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNA 397 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTC
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeE
Confidence 35678888887642 1122 22 2334567788888888888877775 6667766654 2233 2221 245
Q ss_pred eEEEEECCCCCE-EEEEEC---CCeEEEEeCC
Q psy12697 407 VNAIKWDPQGLL-LASCSD---DMTLKIWSLD 434 (602)
Q Consensus 407 i~~~~~~~~~~~-l~~~~~---dg~i~iwd~~ 434 (602)
+.....++++.. +++.+. -+.+..+|+.
T Consensus 398 ~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 398 IFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 666777776654 444443 3678888876
No 351
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.36 E-value=4.2 Score=42.17 Aligned_cols=106 Identities=6% Similarity=0.017 Sum_probs=56.6
Q ss_pred cCCCEEEEEecC----CcEEEEeCCCCceeEEe-e-----ecc-CCeeeeecc--CCCeEEEeeCC------CeEEEEEc
Q psy12697 331 KRGNYILSAGVD----KTTIIWDAASGQCEQQF-S-----FHS-APALDVDWQ--SNTSFASCSTD------QHIHVCKL 391 (602)
Q Consensus 331 ~~~~~l~~~~~d----g~i~~wd~~~~~~~~~~-~-----~~~-~~~~~~~~~--~~~~~~~~~~~------~~i~i~d~ 391 (602)
.++..++.|+.+ ..+.+||..+++....- . ... ..-.+++.. .+..++.|+.+ +.+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 345566666643 45778888777654432 1 111 111223333 45556676643 35788888
Q ss_pred CCCceee--EeccCCCCeEEEEECCCCCEEEEEECCC--eEEEEeCCCCe
Q psy12697 392 HSDKPVK--SFEGHTNEVNAIKWDPQGLLLASCSDDM--TLKIWSLDKDN 437 (602)
Q Consensus 392 ~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~ 437 (602)
.+.+-.. .+...... .+++.-.++++++.|+.++ .+.+||..+..
T Consensus 476 ~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~ 524 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEI 524 (695)
T ss_dssp TTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTE
T ss_pred CCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCc
Confidence 8754221 11111111 2233324788888887654 68888887643
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.71 E-value=7.8 Score=37.67 Aligned_cols=30 Identities=20% Similarity=0.094 Sum_probs=22.8
Q ss_pred CceEEEEECCCCC-eEEEeeCCceEEEEecC
Q psy12697 141 EPVYSVAFSPDGK-FLASGSFDKCVHIWSAR 170 (602)
Q Consensus 141 ~~V~~~~~s~d~~-~l~s~~~d~~v~iwd~~ 170 (602)
..-+.|+|.|||+ .|+.+...|.|++++..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 4567899999996 45556678999998743
No 353
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.24 E-value=1.7 Score=42.60 Aligned_cols=109 Identities=10% Similarity=0.115 Sum_probs=65.6
Q ss_pred eEEEEEccCCCEEEEEe-CCCeEEEEeCCCCce-------------eeeecccCCCeeEeeecCCc-eEEEeeCCCcEEE
Q psy12697 483 IFALKWNKRGNYILSAG-VDKTTIIWDAASGQC-------------EQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHV 547 (602)
Q Consensus 483 v~~i~~s~~~~~l~s~~-~dg~i~iwd~~~~~~-------------~~~~~~~~~~v~~~~~s~~~-~l~~~~~d~~i~i 547 (602)
...+.++|||++++.++ .+.++.++|++.-.. ..... -.-.....+|.++| -..+.--|..|.-
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence 34678899999988765 588999999874211 22222 23345678999999 5566678999999
Q ss_pred eecCCCCceeeeecccccceEEEEecCCcEEEEEE------CCCCCeEEEecc
Q psy12697 548 CKLHSDKPVKSFEGHTTGQLVHSYKGTGGIFEVCW------NSRGDKVGASAS 594 (602)
Q Consensus 548 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~------spdg~~l~~~~~ 594 (602)
|++... ++.+.+......+..+.-+-.+-.+.- .|||++|++...
T Consensus 404 Wni~~a--~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 404 WNMEEA--VRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEHHHH--HHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred EeccHH--HHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 998642 111111111122222332333334433 678888887653
No 354
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.71 E-value=20 Score=35.41 Aligned_cols=71 Identities=11% Similarity=0.077 Sum_probs=48.1
Q ss_pred CCeeeeeccCCCeEEEe--eCCCeEEEEEcCCC------ce-------eeEeccCCCCeEEEEECCCCCEEEEEECCCeE
Q psy12697 364 APALDVDWQSNTSFASC--STDQHIHVCKLHSD------KP-------VKSFEGHTNEVNAIKWDPQGLLLASCSDDMTL 428 (602)
Q Consensus 364 ~~~~~~~~~~~~~~~~~--~~~~~i~i~d~~~~------~~-------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 428 (602)
.....+..+|++.++++ -.+.++.++|+... +. ....+ -.-.....+|+++|....+..-|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceE
Confidence 34456677888775544 45778999998742 11 12222 23457789999999666666789999
Q ss_pred EEEeCCC
Q psy12697 429 KIWSLDK 435 (602)
Q Consensus 429 ~iwd~~~ 435 (602)
.-|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999864
No 355
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=87.49 E-value=17 Score=33.13 Aligned_cols=192 Identities=8% Similarity=0.065 Sum_probs=104.4
Q ss_pred cCCCEEEEEecCCcEEEEeCCCCcee-------EEe--eeccCCeeeeeccCCCeEEEeeCCCeEEEEEcCC--------
Q psy12697 331 KRGNYILSAGVDKTTIIWDAASGQCE-------QQF--SFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHS-------- 393 (602)
Q Consensus 331 ~~~~~l~~~~~dg~i~~wd~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~-------- 393 (602)
++..++++.+.+|.|+-..+...+.. ..+ ...+.-+..+.......++..+..|.++-+....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 45667888999999987765433211 111 1112222233334456788888888887776532
Q ss_pred -Cce---eeEeccCCCCeEEEEECC---CCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCc
Q psy12697 394 -DKP---VKSFEGHTNEVNAIKWDP---QGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNM 466 (602)
Q Consensus 394 -~~~---~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 466 (602)
|.+ ...+. ....|..+..-+ +..+|+..+..|.++...+....... ...+..+.
T Consensus 86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r-----~~G~~~i~------------- 146 (312)
T 1suu_A 86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK-----SRGVIVIK------------- 146 (312)
T ss_dssp --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC---------CEECBC-------------
T ss_pred CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC-----CCcEEEEe-------------
Confidence 111 11122 223444443322 45678888999999888765422111 11111111
Q ss_pred ceeeeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC---------ceeeeecccCCCeeEeeecCCc-eE
Q psy12697 467 SLIFILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG---------QCEQQFSFHSAPALDVDWQSNT-SF 536 (602)
Q Consensus 467 ~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~~v~~~~~s~~~-~l 536 (602)
+.. ...+..+....++..++..+.+|.+..+....- .....+. ....|..+...+++ .+
T Consensus 147 ---------L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l 215 (312)
T 1suu_A 147 ---------LND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYL 215 (312)
T ss_dssp ---------CCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEE
T ss_pred ---------cCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeE
Confidence 111 234444444444567888889999888876541 1112222 23456666554444 78
Q ss_pred EEeeCCCcEEEeecCC
Q psy12697 537 ASCSTDQHIHVCKLHS 552 (602)
Q Consensus 537 ~~~~~d~~i~iw~~~~ 552 (602)
++.+..|..+..++..
T Consensus 216 ~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 216 LIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEETTSEEEEEEGGG
T ss_pred EEEECCCceEEEEHHH
Confidence 8888999988888754
No 356
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=87.26 E-value=22 Score=34.42 Aligned_cols=105 Identities=10% Similarity=0.103 Sum_probs=61.6
Q ss_pred CCeEEEEEccCCC-EEEEEecCCcEEEEeCCCCc---eeEEee--e-------ccCCeeeeeccCC----CeEEEe-eC-
Q psy12697 322 GPIFALKWNKRGN-YILSAGVDKTTIIWDAASGQ---CEQQFS--F-------HSAPALDVDWQSN----TSFASC-ST- 382 (602)
Q Consensus 322 ~~i~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~---~~~~~~--~-------~~~~~~~~~~~~~----~~~~~~-~~- 382 (602)
...+.|+|.|++. .|+++...|.|++++..... .+..+. . .......+++.|+ +.+.+. +.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4567999999996 56667788999999754221 112111 0 1345678899886 444333 22
Q ss_pred -C----------CeEEEEEcCCC----------ceeeEec--cCCCCeEEEEECCCCCEEEEEECCC
Q psy12697 383 -D----------QHIHVCKLHSD----------KPVKSFE--GHTNEVNAIKWDPQGLLLASCSDDM 426 (602)
Q Consensus 383 -~----------~~i~i~d~~~~----------~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg 426 (602)
+ ..|.-|.+..+ +.+..+. ........|+|.|||.+.++.++.+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 13444655421 1222222 1223468899999998888777654
No 357
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=84.87 E-value=26 Score=33.00 Aligned_cols=135 Identities=13% Similarity=0.027 Sum_probs=65.0
Q ss_pred CeEEEEeCCCeEEEEcCC--Ccceeec--ccccCCeEEEEEcc-CCCEEEEEecCC----cEEEEeCCCCceeEEeee--
Q psy12697 293 SFLATGSYDGYARIWTSD--GSLKSTL--GQHKGPIFALKWNK-RGNYILSAGVDK----TTIIWDAASGQCEQQFSF-- 361 (602)
Q Consensus 293 ~~l~~~~~dg~i~i~~~~--~~~~~~~--~~~~~~i~~~~~~~-~~~~l~~~~~dg----~i~~wd~~~~~~~~~~~~-- 361 (602)
..|.+|+..| +.+++.. +...... ......|.+|++.| +...|.+++..| .|...+ ..++.-..+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccc
Confidence 4677788777 4444432 2222221 12235699999998 333455555454 343332 22322121111
Q ss_pred --c----------cCCeeeeeccC---CCeEEEeeCCCeEEEEEcCCCceeeEecc-------------------CCCCe
Q psy12697 362 --H----------SAPALDVDWQS---NTSFASCSTDQHIHVCKLHSDKPVKSFEG-------------------HTNEV 407 (602)
Q Consensus 362 --~----------~~~~~~~~~~~---~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-------------------~~~~i 407 (602)
. ...+..+++.+ .+.+.++...+.|...+-. ++....+.. ....+
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i 179 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM 179 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCCCCCce
Confidence 0 11355666664 4566666666665554322 222222211 12357
Q ss_pred EEEEECCC-CCEEEEEECCCeEEE
Q psy12697 408 NAIKWDPQ-GLLLASCSDDMTLKI 430 (602)
Q Consensus 408 ~~~~~~~~-~~~l~~~~~dg~i~i 430 (602)
.+|.++|. ...|..+..++.|..
T Consensus 180 ~~i~~d~~~~~~l~vg~~~ggl~~ 203 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSSGGVFE 203 (394)
T ss_dssp EEEEECTTCTTCEEEEEETBEEEE
T ss_pred eEEEECCCCCCEEEEEECCCCEEE
Confidence 89999983 444555554444433
No 358
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.97 E-value=24 Score=38.00 Aligned_cols=40 Identities=15% Similarity=0.281 Sum_probs=34.4
Q ss_pred cCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec
Q psy12697 480 KGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS 519 (602)
Q Consensus 480 ~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 519 (602)
...+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 235 ~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 235 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 3457778888899999999999999999999999887653
No 359
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=82.51 E-value=32 Score=32.17 Aligned_cols=189 Identities=8% Similarity=0.102 Sum_probs=102.9
Q ss_pred ccceeeeecccc--eeeeeeecc------CCceEEEEEC---CC----CCeEEEe-eCCceEEEEecCCceeEEEeeccC
Q psy12697 119 RLTLPLWDVERG--ECLNTLTRH------TEPVYSVAFS---PD----GKFLASG-SFDKCVHIWSARTGQLVHSYKGTG 182 (602)
Q Consensus 119 ~~~i~vwd~~~~--~~~~~l~~h------~~~V~~~~~s---~d----~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~ 182 (602)
.+.|.+||+.+. +.++++.-. ...+..+++. |+ +.+...+ +..+-|.|+|+.+++..+.....
T Consensus 122 ~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~- 200 (381)
T 3q6k_A 122 RPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT- 200 (381)
T ss_dssp CCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG-
T ss_pred CceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC-
Confidence 568999999999 998877542 3457888887 32 3344333 35688999999999877654211
Q ss_pred ceEEEEeCCCCCCCCCCCCccccccccccCCcceEeeCCCcceEEEEEcCC----CCEEEEeeCCCcEEEEeCCCCCCCC
Q psy12697 183 GIFEVCWNSRGTPPNPPESMEVDASIEIPQSKATKLIGHESEVFICAWNPV----KDFLASGSGDSTARIWDMTDSTKKD 258 (602)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~----~~~l~s~~~dg~i~iw~~~~~~~~~ 258 (602)
|.|+ . .....+.... .. -...|..++.+|+ ++.|.-....+ -++|.+.+.....
T Consensus 201 ------~~pd-~----------~~~~~i~G~~-~~---~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~ 258 (381)
T 3q6k_A 201 ------FKAE-R----------PTKFDYGGKE-YE---FKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQ 258 (381)
T ss_dssp ------GSCC-S----------CEEEEETTEE-EE---ECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSS
T ss_pred ------Cccc-c----------CcceEECCEE-eE---eccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhC
Confidence 1111 0 0000000000 11 1356999999998 67777766544 2455543221111
Q ss_pred C---ccceEEEEEEecCCCcccCCCCceeEEeeC-CCCCeEEEEeCCCeEEEEcCCC-cc----eeeccc--ccCCeEEE
Q psy12697 259 P---KELQIVLRHCISKGGTEVPSNKDVTSLDWN-NNGSFLATGSYDGYARIWTSDG-SL----KSTLGQ--HKGPIFAL 327 (602)
Q Consensus 259 ~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~i~~~~~-~~----~~~~~~--~~~~i~~~ 327 (602)
. ........ .+....-..+++. .+|.++++--..+.|..|+.++ .. ...+.. .-.....+
T Consensus 259 ~~~~~~v~~~G~---------kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~ 329 (381)
T 3q6k_A 259 KGGKLNPELLGN---------RGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDI 329 (381)
T ss_dssp TTCCCCCEEEEE---------CCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEE
T ss_pred cchhhceEEeee---------cCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeE
Confidence 0 01111000 0011334556775 6787777777889999999876 22 122211 11235566
Q ss_pred EEccCCCEEEEE
Q psy12697 328 KWNKRGNYILSA 339 (602)
Q Consensus 328 ~~~~~~~~l~~~ 339 (602)
.+.++|...+.+
T Consensus 330 ~i~~~g~Lwv~s 341 (381)
T 3q6k_A 330 SVDSKGGLWFMS 341 (381)
T ss_dssp EECTTSCEEEEE
T ss_pred EECCCCeEEEEE
Confidence 665555443333
No 360
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=81.58 E-value=9.3 Score=41.22 Aligned_cols=38 Identities=21% Similarity=0.211 Sum_probs=34.2
Q ss_pred ceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEee
Q psy12697 142 PVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYK 179 (602)
Q Consensus 142 ~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 179 (602)
.|.+++..++..+++|-+.|+++|||++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 57788888899999999999999999999999988754
No 361
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=80.46 E-value=31 Score=30.63 Aligned_cols=187 Identities=12% Similarity=0.053 Sum_probs=97.9
Q ss_pred cceeeeecccceeeeeeeccCCceEEEEECC-CCCeEEEeeCCceEEEEecCCceeEEEeeccCceEEEEeCCCCCCCCC
Q psy12697 120 LTLPLWDVERGECLNTLTRHTEPVYSVAFSP-DGKFLASGSFDKCVHIWSARTGQLVHSYKGTGGIFEVCWNSRGTPPNP 198 (602)
Q Consensus 120 ~~i~vwd~~~~~~~~~l~~h~~~V~~~~~s~-d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (602)
+.+++|++..+.....+. ....|..+.... +..+++..+.+|.++-..+..-. .+ ..++..
T Consensus 48 ~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~-~~----~~G~~~------------ 109 (276)
T 3no0_A 48 YWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE-YK----AQGMPI------------ 109 (276)
T ss_dssp EEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT-TC----STTEEC------------
T ss_pred EEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh-hh----cCCeEE------------
Confidence 455556555332211122 344555554321 56789999999999988775432 10 001000
Q ss_pred CCCccccccccccCCcceEeeCCCcceEEEEEcCCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccC
Q psy12697 199 PESMEVDASIEIPQSKATKLIGHESEVFICAWNPVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVP 278 (602)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (602)
..+. ..+.+..+........++..+..|.+..+....-........... .....
T Consensus 110 -----------------i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~--------~i~L~ 163 (276)
T 3no0_A 110 -----------------IKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQ--------GIKLE 163 (276)
T ss_dssp -----------------SCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEE--------CCCCC
T ss_pred -----------------EecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEE--------EEccC
Confidence 1122 233455555555566788888899888776643222111000000 01112
Q ss_pred CCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC--------CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEE--E
Q psy12697 279 SNKDVTSLDWNNNGSFLATGSYDGYARIWTSD--------GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTII--W 348 (602)
Q Consensus 279 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~--w 348 (602)
....|..+...+++..++..+..|.++...+. +.-...+ ...+.+..+....+...++..+.+|.+.. +
T Consensus 164 ~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~ 242 (276)
T 3no0_A 164 KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKI 242 (276)
T ss_dssp TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeee
Confidence 23556666555566788888999988887643 1122222 23344555444334456666777777766 6
Q ss_pred eCC
Q psy12697 349 DAA 351 (602)
Q Consensus 349 d~~ 351 (602)
+..
T Consensus 243 ~~~ 245 (276)
T 3no0_A 243 NQK 245 (276)
T ss_dssp EGG
T ss_pred CHH
Confidence 543
No 362
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=79.30 E-value=38 Score=30.96 Aligned_cols=273 Identities=11% Similarity=0.065 Sum_probs=132.1
Q ss_pred CeEEEEeCCCeEEEEcCC----------CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEE---eCCCC------
Q psy12697 293 SFLATGSYDGYARIWTSD----------GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIW---DAASG------ 353 (602)
Q Consensus 293 ~~l~~~~~dg~i~i~~~~----------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~w---d~~~~------ 353 (602)
..+++.+.+|.|+--.++ +..-..+ .....+..+........|+.-+..|.++-. ++...
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~-ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGL-KQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCC-CGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCC
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCcccccc-CCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCC
Confidence 457777888888765421 1111111 233455555555556677777777766544 44432
Q ss_pred ceeEE-eee-ccCCeeeeec----cCCCeEEEeeCCCeEEEEEcCCCc-------eeeEeccCCCCeEEEEECCCCCEEE
Q psy12697 354 QCEQQ-FSF-HSAPALDVDW----QSNTSFASCSTDQHIHVCKLHSDK-------PVKSFEGHTNEVNAIKWDPQGLLLA 420 (602)
Q Consensus 354 ~~~~~-~~~-~~~~~~~~~~----~~~~~~~~~~~~~~i~i~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~ 420 (602)
..+.. +.. ....+..+.. .++..++..+.+|.++-..+.... ....+.. .+.+..+........|+
T Consensus 83 ~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~il 161 (327)
T 3uc1_A 83 QHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLL 161 (327)
T ss_dssp EEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEE
T ss_pred EEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEE
Confidence 11111 111 1233444322 245789999999999998865422 2223333 34455555445556788
Q ss_pred EEECCCeEEEEeCC--CCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE
Q psy12697 421 SCSDDMTLKIWSLD--KDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA 498 (602)
Q Consensus 421 ~~~~dg~i~iwd~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~ 498 (602)
..+..|.+..+... .-.. .......+..+. +. ....|.++...+++.+++..
T Consensus 162 l~T~~G~~~rf~~~~~eip~---~gr~a~Gv~~i~----------------------L~-~~d~Vv~~~~~~~~~~ll~~ 215 (327)
T 3uc1_A 162 LVSANGQSIRFSATDEALRP---MGRATSGVQGMR----------------------FN-IDDRLLSLNVVREGTYLLVA 215 (327)
T ss_dssp EEETTSEEEEEECCTTTSCC---CCTTSBCEESSC----------------------CC-TTCCEEEEEECCTTCEEEEE
T ss_pred EEECCCeEEEEECcccccCc---CCcCCCCeeeec----------------------CC-CCCEEEEEEEECCCCEEEEE
Confidence 88888988877765 2111 100011111111 11 23345555555566789999
Q ss_pred eCCCeEEEEeCCCCce-------eeeec--ccCCCeeEeeecCCc-eEEEeeCCCcEEEeecCCCCceeeeecccccceE
Q psy12697 499 GVDKTTIIWDAASGQC-------EQQFS--FHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLV 568 (602)
Q Consensus 499 ~~dg~i~iwd~~~~~~-------~~~~~--~~~~~v~~~~~s~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 568 (602)
+..|.++.-.+..-.. +..+. ...+.+..+....+. .++..+.+|.+.-++...-.... ....|...
T Consensus 216 T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~i~~~g---R~a~GV~~ 292 (327)
T 3uc1_A 216 TSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQVRKAG---RQTKGVRL 292 (327)
T ss_dssp ETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGGSCBCC---TTSCCEEC
T ss_pred eCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhhccccC---CCCCCeEe
Confidence 9999988877543221 12222 113344444433333 66667777777777654322111 11122222
Q ss_pred EEEecCCcEEEEEECC-CCCeEEEeccCC
Q psy12697 569 HSYKGTGGIFEVCWNS-RGDKVGASASDG 596 (602)
Q Consensus 569 ~~~~~~~~i~~l~~sp-dg~~l~~~~~dg 596 (602)
-.+.....|.++...+ +...+.+.+.+|
T Consensus 293 i~l~~~d~vv~~~~~~~~~~~~~~~~~~g 321 (327)
T 3uc1_A 293 MNLGEGDTLLAIARNAEESGDDNAVDANG 321 (327)
T ss_dssp TTCCTTCCEEEEEECC-------------
T ss_pred EecCCCCEEEEEEEcCCCcceEEEEecCC
Confidence 2233345566666544 345566666665
No 363
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=79.28 E-value=62 Score=33.44 Aligned_cols=187 Identities=9% Similarity=0.004 Sum_probs=96.1
Q ss_pred EccCCCEEEEE-ecC----CcEEEEeCCCCceeEE-eeeccC--------CeeeeeccCCCeEEEeeC-----------C
Q psy12697 329 WNKRGNYILSA-GVD----KTTIIWDAASGQCEQQ-FSFHSA--------PALDVDWQSNTSFASCST-----------D 383 (602)
Q Consensus 329 ~~~~~~~l~~~-~~d----g~i~~wd~~~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~-----------~ 383 (602)
++|++++++.+ +.. ..++++|+.+++.+.. +. ... ....++|.++..++.+.. .
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCC
Confidence 78888876643 222 3689999999977631 22 111 012347776666665532 2
Q ss_pred CeEEEEEcCCCc--eeeEeccCCCC-eEEEEECCCCCE-----EEEEECC---CeEEEEeCCC--CeeeEeeccccccEE
Q psy12697 384 QHIHVCKLHSDK--PVKSFEGHTNE-VNAIKWDPQGLL-----LASCSDD---MTLKIWSLDK--DNCVHDLQAHNKEIY 450 (602)
Q Consensus 384 ~~i~i~d~~~~~--~~~~~~~~~~~-i~~~~~~~~~~~-----l~~~~~d---g~i~iwd~~~--~~~~~~~~~~~~~i~ 450 (602)
..|+.|.+.+.. -...+.+.... -.....++++++ +++.+.+ ..+.+.+... ++ ...+......
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-- 292 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPSDA-- 292 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCTTC--
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCCcc--
Confidence 468888876642 22334333333 234555666662 4443322 3455555432 21 1111111100
Q ss_pred EEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE----------eCCCeEEEEeCCCCc-------
Q psy12697 451 TIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA----------GVDKTTIIWDAASGQ------- 513 (602)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~----------~~dg~i~iwd~~~~~------- 513 (602)
.+..+.++.+++.. ...+.|.+.|+.++.
T Consensus 293 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 338 (711)
T 4hvt_A 293 ----------------------------------TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKT 338 (711)
T ss_dssp ----------------------------------EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCT
T ss_pred ----------------------------------eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccc
Confidence 01122244444422 246778888887642
Q ss_pred eeee-ecc-cCCCeeEeeecCCceEEEeeCCCc--EEEeecCCC
Q psy12697 514 CEQQ-FSF-HSAPALDVDWQSNTSFASCSTDQH--IHVCKLHSD 553 (602)
Q Consensus 514 ~~~~-~~~-~~~~v~~~~~s~~~~l~~~~~d~~--i~iw~~~~~ 553 (602)
.... +.. ....+..+.|..+..+++...++. +.++++.++
T Consensus 339 ~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g 382 (711)
T 4hvt_A 339 SLKILFTPTANEVFNFISTTKDRVFLATYDNVVAKVVTFTLENE 382 (711)
T ss_dssp TCEEEECCCTTEEEEEEEECSSCEEEEEEETTEEEEEEECEETT
T ss_pred cceEEECCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEECCCC
Confidence 1222 322 234577888988777777777764 667776554
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=78.63 E-value=16 Score=37.34 Aligned_cols=37 Identities=16% Similarity=0.320 Sum_probs=30.8
Q ss_pred ceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeec
Q psy12697 142 PVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKG 180 (602)
Q Consensus 142 ~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 180 (602)
.|.++.+ +..+|++-+.|+++|+||+.+++++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4666555 478999999999999999999999887654
No 365
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=76.09 E-value=52 Score=30.90 Aligned_cols=194 Identities=15% Similarity=0.031 Sum_probs=90.0
Q ss_pred CCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcCC--C
Q psy12697 234 KDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTSD--G 311 (602)
Q Consensus 234 ~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~~--~ 311 (602)
...++.-..||.|..|=................... + ........+..++. .....++-..||.|..|-.. +
T Consensus 10 ~~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~--~--v~~~~~~~i~~i~~--G~~~~~~l~~~G~v~~wG~n~~G 83 (389)
T 3kci_A 10 GRENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPT--P--CEALATLRPVQLIG--GEQTLFAVTADGKLYATGYGAGG 83 (389)
T ss_dssp -----------CEEEEEECTTSTTSSCSCSEEEEEE--E--CHHHHHTCEEEEEE--ETTEEEEEETTSCEEEEECCGGG
T ss_pred cccceeECCCCeEEEeeCCCCccCCCCcCccccCCE--e--cccccCCceEEEEe--CCCeEEEEcCCCcEEEEECCCCC
Confidence 345666677888888866544333211111100000 0 00000122334432 33455666788888888533 1
Q ss_pred c----------ceeecc-cccCCeEEEEEccCCCEEEEEecCCcEEEEeCCCC-c----------eeEEeee-ccCCeee
Q psy12697 312 S----------LKSTLG-QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG-Q----------CEQQFSF-HSAPALD 368 (602)
Q Consensus 312 ~----------~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~----------~~~~~~~-~~~~~~~ 368 (602)
+ ....+. .....+..++.+....+.+..+.||.|..|-.... + ....+.. ....+..
T Consensus 84 qLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ 163 (389)
T 3kci_A 84 RLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD 163 (389)
T ss_dssp TTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEE
T ss_pred CCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEE
Confidence 1 011111 12234555677777778888889999999954321 0 0111111 1123444
Q ss_pred eeccCCCeEEEeeCCCeEEEEEcCCC-c----------eeeEec-cCCCCeEEEEECCCCCEEEEEECCCeEEEEeCC
Q psy12697 369 VDWQSNTSFASCSTDQHIHVCKLHSD-K----------PVKSFE-GHTNEVNAIKWDPQGLLLASCSDDMTLKIWSLD 434 (602)
Q Consensus 369 ~~~~~~~~~~~~~~~~~i~i~d~~~~-~----------~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 434 (602)
++.. ....++...+|.|+.|-.... + ....+. .....|..++........+.-..||.|..|-..
T Consensus 164 va~G-~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n 240 (389)
T 3kci_A 164 VAAG-GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDG 240 (389)
T ss_dssp EEEC-SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECC
T ss_pred EEeC-cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCC
Confidence 4332 234455667899999975431 0 011111 123356677665433566667789999999654
No 366
>2d68_A FOP, FGFR1OP; alpha helical bundle, dimer, cell cycle; 1.60A {Homo sapiens}
Probab=75.99 E-value=0.39 Score=32.99 Aligned_cols=29 Identities=28% Similarity=0.238 Sum_probs=26.6
Q ss_pred hhhhhhhhhhhcCceeeeeccccccCCcc
Q psy12697 8 VNFLVYRYLQESGFQHSAYTFGIESHISQ 36 (602)
Q Consensus 8 ~n~li~ryL~e~g~~~~a~~~~~e~~~~~ 36 (602)
+|-||-.||+=.||++|+.+|+-|+..+.
T Consensus 21 i~~LVrEyLef~~l~~TlsVf~pEs~l~~ 49 (82)
T 2d68_A 21 VASLVAEFLQFFNLDFTLAVFQPETSTLQ 49 (82)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHcCCcchHHhhhhccCCCC
Confidence 67899999999999999999999999873
No 367
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=72.83 E-value=57 Score=29.79 Aligned_cols=189 Identities=8% Similarity=0.032 Sum_probs=99.2
Q ss_pred CEEEEEecCCcEEEEeCCCCc-------eeEEe--eeccCCeeeeeccCCCeEEEeeCCCeEEEEEc---CC------Cc
Q psy12697 334 NYILSAGVDKTTIIWDAASGQ-------CEQQF--SFHSAPALDVDWQSNTSFASCSTDQHIHVCKL---HS------DK 395 (602)
Q Consensus 334 ~~l~~~~~dg~i~~wd~~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~---~~------~~ 395 (602)
..+++.+.+|.|+--.+.+.+ -...+ .........+..+....++..+..|.++-... .. |.
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~ 83 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ 83 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence 456777778877765432211 11111 11112222233345566777777887766553 22 22
Q ss_pred eeeE---eccCCCCeEEE-EECC--CCCEEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCccee
Q psy12697 396 PVKS---FEGHTNEVNAI-KWDP--QGLLLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLI 469 (602)
Q Consensus 396 ~~~~---~~~~~~~i~~~-~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 469 (602)
++.. +. ....|..+ .+.+ +..+++..+.+|.++.-.+........ ..+..+.+
T Consensus 84 ~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r-----~G~~~i~l--------------- 142 (327)
T 3uc1_A 84 HVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS-----GGIVAVNL--------------- 142 (327)
T ss_dssp EHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS-----SCEESCBC---------------
T ss_pred EHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc-----CceEEEEE---------------
Confidence 2211 22 23445554 4442 578999999999999887654321110 11111111
Q ss_pred eeeeeccCCccCCeEEEEEccCCCEEEEEeCCCeEEEEeCC--CC---------ceeeeecccCCCeeEeeecCCc-eEE
Q psy12697 470 FILKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA--SG---------QCEQQFSFHSAPALDVDWQSNT-SFA 537 (602)
Q Consensus 470 ~~~~~~~~~~~~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~--~~---------~~~~~~~~~~~~v~~~~~s~~~-~l~ 537 (602)
.. ...+..+........|+..+..|.+..+... .- .....+. ....|.++...+++ .++
T Consensus 143 -------ke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll 213 (327)
T 3uc1_A 143 -------RD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLL 213 (327)
T ss_dssp -------CT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEE
T ss_pred -------CC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEE
Confidence 11 2233333333445667888888988887766 21 1111222 23456666555555 888
Q ss_pred EeeCCCcEEEeecCC
Q psy12697 538 SCSTDQHIHVCKLHS 552 (602)
Q Consensus 538 ~~~~d~~i~iw~~~~ 552 (602)
..+..|.++.-.+..
T Consensus 214 ~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 214 VATSGGYAKRTAIEE 228 (327)
T ss_dssp EEETTSEEEEEEGGG
T ss_pred EEeCCCcEEEEEHHH
Confidence 889999988877654
No 368
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=70.41 E-value=62 Score=29.26 Aligned_cols=194 Identities=8% Similarity=0.034 Sum_probs=104.5
Q ss_pred CCCCeEEEEeCCCeEEEEcCCCc--------ce--eecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCC---CCcee
Q psy12697 290 NNGSFLATGSYDGYARIWTSDGS--------LK--STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA---SGQCE 356 (602)
Q Consensus 290 ~~~~~l~~~~~dg~i~i~~~~~~--------~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~---~~~~~ 356 (602)
++..++++.+.+|.|+--.+..- -. ..+. ....+..+........++..+..|.++-.... .....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 45667888899999987754311 11 1112 23445555555556678888888887665442 21100
Q ss_pred E-------Eeee-ccCCeeeeec----cCCCeEEEeeCCCeEEEEEcCC-------CceeeEeccCCCCeEEEEECCCCC
Q psy12697 357 Q-------QFSF-HSAPALDVDW----QSNTSFASCSTDQHIHVCKLHS-------DKPVKSFEGHTNEVNAIKWDPQGL 417 (602)
Q Consensus 357 ~-------~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~ 417 (602)
. .+.. ....+..+.. .++..++..+.+|.++...+.. +.....+.. .+.+..+.......
T Consensus 85 ~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 0 0111 1122333322 2456788999999999887743 223333443 44555555545556
Q ss_pred EEEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEE
Q psy12697 418 LLASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILS 497 (602)
Q Consensus 418 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s 497 (602)
.++..+.+|.+..+....-.. .......+..+...+ ...|..+..-.++..+++
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~---~gR~~~Gv~~i~L~~-----------------------~d~vv~~~~v~~~~~l~~ 217 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRL---TNRGTQGVCGMKLKE-----------------------GDLFVKVLSVKENPYLLI 217 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCB---CCTTBCCEECCCCCT-----------------------TCCEEEEEECTTCSEEEE
T ss_pred EEEEEeCCCcEEEEEHHHccc---cCCCCCCeEeEEeCC-----------------------CCEEEEEEEECCCCeEEE
Confidence 788888999988887653111 111111222221111 223444444345567888
Q ss_pred EeCCCeEEEEeCCC
Q psy12697 498 AGVDKTTIIWDAAS 511 (602)
Q Consensus 498 ~~~dg~i~iwd~~~ 511 (602)
.+..|..+..++..
T Consensus 218 vt~~G~~kr~~~~e 231 (312)
T 1suu_A 218 VSENGYGKRLNMSK 231 (312)
T ss_dssp EETTSEEEEEEGGG
T ss_pred EECCCceEEEEHHH
Confidence 88999988888753
No 369
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=69.47 E-value=74 Score=29.73 Aligned_cols=184 Identities=10% Similarity=0.058 Sum_probs=98.7
Q ss_pred CeEEEEEcCCC--ceeeEeccC------CCCeEEEEEC---CC----CCEEEEEE-CCCeEEEEeCCCCeeeEeeccccc
Q psy12697 384 QHIHVCKLHSD--KPVKSFEGH------TNEVNAIKWD---PQ----GLLLASCS-DDMTLKIWSLDKDNCVHDLQAHNK 447 (602)
Q Consensus 384 ~~i~i~d~~~~--~~~~~~~~~------~~~i~~~~~~---~~----~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~ 447 (602)
-.|.+||+.++ +.++.+.-. ...+..++++ |+ +.++..+. ..+-|.++|+.+++..+.+..+
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~-- 200 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT-- 200 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG--
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC--
Confidence 36778888888 777766532 3457788887 32 33444443 4677999999998877665321
Q ss_pred cEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccC----CCEEEEEeCCCeEEEEeCCC-----Cceeee-
Q psy12697 448 EIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKR----GNYILSAGVDKTTIIWDAAS-----GQCEQQ- 517 (602)
Q Consensus 448 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~----~~~l~s~~~dg~i~iwd~~~-----~~~~~~- 517 (602)
+.|+ .. ..+......-.-...+..|++||+ ++.|.-....+ -++|.+.+ ......
T Consensus 201 ------~~pd-~~-------~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v 265 (381)
T 3q6k_A 201 ------FKAE-RP-------TKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNP 265 (381)
T ss_dssp ------GSCC-SC-------EEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCC
T ss_pred ------Cccc-cC-------cceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhce
Confidence 2222 10 000000000012357899999998 77777666554 23343322 111111
Q ss_pred -ecccC---CCeeEeeec-CCc-eEEEeeCCCcEEEeecCC-C---CceeeeecccccceEEEEecCCcEEEEEECCCCC
Q psy12697 518 -FSFHS---APALDVDWQ-SNT-SFASCSTDQHIHVCKLHS-D---KPVKSFEGHTTGQLVHSYKGTGGIFEVCWNSRGD 587 (602)
Q Consensus 518 -~~~~~---~~v~~~~~s-~~~-~l~~~~~d~~i~iw~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~i~~l~~spdg~ 587 (602)
..+.. ..-..++.. .+| .+++--..+.|..|+..+ . +....+.... . -.-+..+.+.++|.
T Consensus 266 ~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~--~-------l~~pd~~~i~~~g~ 336 (381)
T 3q6k_A 266 ELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS--R-------FVFGTDISVDSKGG 336 (381)
T ss_dssp EEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT--T-------CCSEEEEEECTTSC
T ss_pred EEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC--C-------ccccCeEEECCCCe
Confidence 11122 223345664 567 666667788899999754 1 1111111000 0 12366778888887
Q ss_pred eEEEec
Q psy12697 588 KVGASA 593 (602)
Q Consensus 588 ~l~~~~ 593 (602)
+.+.+.
T Consensus 337 Lwv~sn 342 (381)
T 3q6k_A 337 LWFMSN 342 (381)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 666554
No 370
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=66.40 E-value=24 Score=34.92 Aligned_cols=19 Identities=0% Similarity=0.020 Sum_probs=16.4
Q ss_pred CcEEEEEECCCCCeEEEec
Q psy12697 575 GGIFEVCWNSRGDKVGASA 593 (602)
Q Consensus 575 ~~i~~l~~spdg~~l~~~~ 593 (602)
..++.++|+||++.|+++-
T Consensus 531 aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 531 CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEEECTTSSEEEEEE
T ss_pred ccccCCEECCCCCEEEEEE
Confidence 5689999999999998764
No 371
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=65.11 E-value=19 Score=39.76 Aligned_cols=39 Identities=15% Similarity=0.293 Sum_probs=32.7
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeec
Q psy12697 481 GPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS 519 (602)
Q Consensus 481 ~~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 519 (602)
..+.+++..++..++++-+.|++++||++.+++++.+..
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 345566677888999999999999999999999887644
No 372
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=63.73 E-value=87 Score=28.47 Aligned_cols=235 Identities=8% Similarity=-0.012 Sum_probs=121.2
Q ss_pred CCCCeEEEEeCCCeEEEEcCC-----CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEe---CCCC------ce
Q psy12697 290 NNGSFLATGSYDGYARIWTSD-----GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD---AASG------QC 355 (602)
Q Consensus 290 ~~~~~l~~~~~dg~i~i~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd---~~~~------~~ 355 (602)
|+...+++.+.+|.|+--.+. +.....+.. ...+..+........|+..+..|.+.-+. +... ..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 456678888999988876432 111112222 33455555555566787788888766543 3322 21
Q ss_pred eEE-eeec-cCCeeeee-cc---CCCeEEEeeCCCeEEEEEcCCC--------ceeeEeccCCCCeEEEEECCCCCEEEE
Q psy12697 356 EQQ-FSFH-SAPALDVD-WQ---SNTSFASCSTDQHIHVCKLHSD--------KPVKSFEGHTNEVNAIKWDPQGLLLAS 421 (602)
Q Consensus 356 ~~~-~~~~-~~~~~~~~-~~---~~~~~~~~~~~~~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~ 421 (602)
+.. +... ...+..+. .. .+..++..+.+|.++...+... .....+... +.+-.+........++.
T Consensus 82 i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l 160 (323)
T 1wp5_A 82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFL 160 (323)
T ss_dssp GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEE
T ss_pred hhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEE
Confidence 111 1111 22344332 22 2456899999999998877422 222233322 45555555445567888
Q ss_pred EECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCC-EEEEEeC
Q psy12697 422 CSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGN-YILSAGV 500 (602)
Q Consensus 422 ~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~-~l~s~~~ 500 (602)
.+.+|.+..+....-.. .......+..+... ....|.++..-+++. .+++.+.
T Consensus 161 ~T~~G~~irf~~~ev~~---~gR~a~GV~~i~L~-----------------------~~d~Vv~~~~~~~~~~~ll~vt~ 214 (323)
T 1wp5_A 161 VTHNGYALWFDESEVSI---VGVRAAGVKGMNLK-----------------------EGDYIVSGQLITSKDESIVVATQ 214 (323)
T ss_dssp EETTSEEEEEEGGGSCB---CCSSCCCEECCCCC-----------------------TTCCEEEEEEECCTTCEEEEEET
T ss_pred EeCCCcEEEEEHHHCcc---cCCCCcCEEEEEeC-----------------------CCCEEEEEEEEcCCCcEEEEEEC
Confidence 88889888887653211 11112222222221 122344443333344 6888888
Q ss_pred CCeEEEEeCCCC-------ceeee---ecccCCCeeEe-eecCCceEEEeeCCCcEEEeecCC
Q psy12697 501 DKTTIIWDAASG-------QCEQQ---FSFHSAPALDV-DWQSNTSFASCSTDQHIHVCKLHS 552 (602)
Q Consensus 501 dg~i~iwd~~~~-------~~~~~---~~~~~~~v~~~-~~s~~~~l~~~~~d~~i~iw~~~~ 552 (602)
.|..+..++..- +-+.. +......+..+ .+.++..++..+..|.+.-..+..
T Consensus 215 ~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 215 RGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp TSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred CCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 888887776531 11111 21222244433 334344566667777766566543
No 373
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=63.33 E-value=21 Score=35.76 Aligned_cols=19 Identities=0% Similarity=0.015 Sum_probs=16.6
Q ss_pred CCcEEEEEECCCCCeEEEe
Q psy12697 574 TGGIFEVCWNSRGDKVGAS 592 (602)
Q Consensus 574 ~~~i~~l~~spdg~~l~~~ 592 (602)
..+++.++|+||++.|++.
T Consensus 530 gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 530 GCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp TCEEEEEEECTTSSEEEEE
T ss_pred CccCcCeeECCCCCEEEEE
Confidence 4789999999999998875
No 374
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=62.49 E-value=1e+02 Score=28.84 Aligned_cols=145 Identities=6% Similarity=-0.052 Sum_probs=73.3
Q ss_pred CCceeEEeeCC-CCCeEEEEeCCC----eEEEEcCCCcceeeccc--------------ccCCeEEEEEccC--CCEEEE
Q psy12697 280 NKDVTSLDWNN-NGSFLATGSYDG----YARIWTSDGSLKSTLGQ--------------HKGPIFALKWNKR--GNYILS 338 (602)
Q Consensus 280 ~~~i~~~~~~~-~~~~l~~~~~dg----~i~i~~~~~~~~~~~~~--------------~~~~i~~~~~~~~--~~~l~~ 338 (602)
...|.+|++.| +...+.+++..| .|...+-.+..-..+.. ....|.++++.|. ...+.+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 35699999998 334455555555 45554433432222211 1124778888862 455666
Q ss_pred EecCCcEEEEeCCCCceeEEeee-------------------ccCCeeeeeccC--CCeEEEeeCCCeEEEEEcCCCcee
Q psy12697 339 AGVDKTTIIWDAASGQCEQQFSF-------------------HSAPALDVDWQS--NTSFASCSTDQHIHVCKLHSDKPV 397 (602)
Q Consensus 339 ~~~dg~i~~wd~~~~~~~~~~~~-------------------~~~~~~~~~~~~--~~~~~~~~~~~~i~i~d~~~~~~~ 397 (602)
++..+.|...+- .++.-..+.. ....+..+.+.+ .+.+.++..++.|...+- .++..
T Consensus 134 g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW 211 (394)
T 3b7f_A 134 GTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTD-AGTDW 211 (394)
T ss_dssp EEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESS-TTSSC
T ss_pred EecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECC-CCCCc
Confidence 666665554432 2222122211 112456677765 345666655555444322 22222
Q ss_pred eEecc-----C--------CCCeEEEEECCC-CCEEEEEECCC
Q psy12697 398 KSFEG-----H--------TNEVNAIKWDPQ-GLLLASCSDDM 426 (602)
Q Consensus 398 ~~~~~-----~--------~~~i~~~~~~~~-~~~l~~~~~dg 426 (602)
..+.. + ...+.++.++|+ ...|..+...+
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 22211 0 124889999985 45666676554
No 375
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=61.38 E-value=93 Score=28.02 Aligned_cols=233 Identities=8% Similarity=0.001 Sum_probs=117.4
Q ss_pred CCCeEEEEeCCCeEEEEcCCCcc----------eeecccccCCeEEEEEccCCCEEEEEecCCcEEEE---eCCCC----
Q psy12697 291 NGSFLATGSYDGYARIWTSDGSL----------KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIW---DAASG---- 353 (602)
Q Consensus 291 ~~~~l~~~~~dg~i~i~~~~~~~----------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~w---d~~~~---- 353 (602)
+...+++.+.+|.|+--.+..-. ...+. ....+..+........|+..+..|.+.-+ ++...
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~k-e~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIK-EEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 45567888889988766543100 01112 22344455445555677777778876554 33322
Q ss_pred --ceeE-Eeee-ccCCeeeee----ccCCCeEEEeeCCCeEEEEEcCCC-------ceeeEeccCCCCeEEEEECCCCCE
Q psy12697 354 --QCEQ-QFSF-HSAPALDVD----WQSNTSFASCSTDQHIHVCKLHSD-------KPVKSFEGHTNEVNAIKWDPQGLL 418 (602)
Q Consensus 354 --~~~~-~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~ 418 (602)
..+. .+.. ....+..+. +.++..++..+.+|.++-..+... .....+..+ +.+-.+........
T Consensus 81 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~ 159 (307)
T 1zi0_A 81 RGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDE 159 (307)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCE
T ss_pred CCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCE
Confidence 1111 1111 222344443 234556899999999998876421 122233333 45555544445557
Q ss_pred EEEEECCCeEEEEeCCCCeeeEeeccccccEEEEEECCCCCCCCCCCcceeeeeeeccCCccCCeEEEEEccCCCEEEEE
Q psy12697 419 LASCSDDMTLKIWSLDKDNCVHDLQAHNKEIYTIKWSPTGPETSNPNMSLIFILKSTLGQHKGPIFALKWNKRGNYILSA 498 (602)
Q Consensus 419 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~s~ 498 (602)
++..+.+|.+..++...-... ......+..+... ....|.++...+++..+++.
T Consensus 160 i~l~T~~G~~irf~~~~v~~~---gr~a~Gv~~i~L~-----------------------~~d~Vv~~~~~~~~~~ll~~ 213 (307)
T 1zi0_A 160 VMLFSAEGKVVRFKESSVRAM---GCNTTGVRGIRLG-----------------------EGDKVVSLIVPRGDGAILTA 213 (307)
T ss_dssp EEEEETTSEEEEEEGGGSCBC---CTTCCCEECCCCC-----------------------TTCCEEEEECCCSSCEEEEE
T ss_pred EEEECCCCcEEEEEHHHcCcc---CCCCCCeEeEEeC-----------------------CCCEEEEEEEecCCCEEEEE
Confidence 778888888877776432111 1111112111111 12334444444455678888
Q ss_pred eCCCeEEEEeCCCCc---------eeeeecccCCCeeEeeec-CCceEEEeeCCCcEEEeecC
Q psy12697 499 GVDKTTIIWDAASGQ---------CEQQFSFHSAPALDVDWQ-SNTSFASCSTDQHIHVCKLH 551 (602)
Q Consensus 499 ~~dg~i~iwd~~~~~---------~~~~~~~~~~~v~~~~~s-~~~~l~~~~~d~~i~iw~~~ 551 (602)
+..|.++-.++..-. ....+....+.+..+... ++..++..+.+|.+.-+++.
T Consensus 214 T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~ 276 (307)
T 1zi0_A 214 TQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVS 276 (307)
T ss_dssp ETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGG
T ss_pred EcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEecc
Confidence 999998888764321 111122222444444332 33355566666666555553
No 376
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=59.94 E-value=7.1 Score=43.24 Aligned_cols=39 Identities=21% Similarity=0.168 Sum_probs=33.5
Q ss_pred ceEEEEECCCCCeEEEeeCCceEEEEecCCceeEEEeec
Q psy12697 142 PVYSVAFSPDGKFLASGSFDKCVHIWSARTGQLVHSYKG 180 (602)
Q Consensus 142 ~V~~~~~s~d~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 180 (602)
.+.+++..++..+|++-+.|+++||||+.+++++.+...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 456667778889999999999999999999999987653
No 377
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=55.03 E-value=1.3e+02 Score=27.87 Aligned_cols=145 Identities=9% Similarity=-0.014 Sum_probs=84.8
Q ss_pred eCCCCCeEEEEeCCCeEEEEcCC----------CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEe---CCCC-
Q psy12697 288 WNNNGSFLATGSYDGYARIWTSD----------GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD---AASG- 353 (602)
Q Consensus 288 ~~~~~~~l~~~~~dg~i~i~~~~----------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd---~~~~- 353 (602)
+-|+..++++.+.+|.|+--.+. +.....+. ....+..+........|+..+..|.+.-+. +...
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 45677889999999999875421 11222232 345566666666667777777788766543 3322
Q ss_pred -----ceeEE-eee-ccCCeeeeec----cCCCeEEEeeCCCeEEEEEcCCC-------ceeeEeccCCCCeEEEEECCC
Q psy12697 354 -----QCEQQ-FSF-HSAPALDVDW----QSNTSFASCSTDQHIHVCKLHSD-------KPVKSFEGHTNEVNAIKWDPQ 415 (602)
Q Consensus 354 -----~~~~~-~~~-~~~~~~~~~~----~~~~~~~~~~~~~~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~ 415 (602)
..+.. +.. ....+..+.. .++..++.++..|.++...+... .....+.. .+.+-.+.....
T Consensus 82 r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~ 160 (370)
T 3l6v_A 82 SNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDG 160 (370)
T ss_dssp TTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECS
T ss_pred cccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCC
Confidence 11111 111 2233444432 34567999999999998876432 22223332 344555555455
Q ss_pred CCEEEEEECCCeEEEEeCC
Q psy12697 416 GLLLASCSDDMTLKIWSLD 434 (602)
Q Consensus 416 ~~~l~~~~~dg~i~iwd~~ 434 (602)
...++..+.+|.+..++..
T Consensus 161 ~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 161 DRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp CCEEEEEETTSEEEEEEGG
T ss_pred CceEEEEeCCCeEEEEEcc
Confidence 5678888888988888754
No 378
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=50.79 E-value=52 Score=32.95 Aligned_cols=58 Identities=12% Similarity=0.153 Sum_probs=40.7
Q ss_pred CeEEEEEccCCCEEEEEeCC------------CeEEEEeCCCCceeeeecccC-CCeeEeeecCCc-eEEEe
Q psy12697 482 PIFALKWNKRGNYILSAGVD------------KTTIIWDAASGQCEQQFSFHS-APALDVDWQSNT-SFASC 539 (602)
Q Consensus 482 ~v~~i~~s~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~~-~l~~~ 539 (602)
..-.|+|+|+|++++.-..+ ..+.+.+..+++..+-+.++. ..++.++|+||+ .|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34568999999977764432 246667777788776666543 469999999999 55443
No 379
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=47.98 E-value=25 Score=35.91 Aligned_cols=37 Identities=19% Similarity=0.268 Sum_probs=29.4
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeeecc
Q psy12697 482 PIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF 520 (602)
Q Consensus 482 ~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 520 (602)
.|.++.+ +..++++-+.|.++|+||+.+++++....-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3444444 478999999999999999999998876654
No 380
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=47.62 E-value=1.5e+02 Score=26.17 Aligned_cols=153 Identities=12% Similarity=-0.027 Sum_probs=85.6
Q ss_pred CceeEEeeCCCCCeEEEEeCCCeEEEEcC---C-CcceeecccccCCeEEEEEcc-CCCEEEEEecCCcEEEEeCCCCc-
Q psy12697 281 KDVTSLDWNNNGSFLATGSYDGYARIWTS---D-GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQ- 354 (602)
Q Consensus 281 ~~i~~~~~~~~~~~l~~~~~dg~i~i~~~---~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~~- 354 (602)
+.+..+.-......|+.-+..|.++-... . +.....+ .....|..+.... +..+++..+.+|.++-..+....
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll-~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~ 102 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLK-SREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEY 102 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCS-STTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTT
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccC-CCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhh
Confidence 33444443344456666777787665432 1 1100112 2345566664421 46789999999999988765432
Q ss_pred ---eeEEeeec-cCCeeee-eccCCCeEEEeeCCCeEEEEEcCCC---------ceeeEeccCCCCeEEEEECCCCCEEE
Q psy12697 355 ---CEQQFSFH-SAPALDV-DWQSNTSFASCSTDQHIHVCKLHSD---------KPVKSFEGHTNEVNAIKWDPQGLLLA 420 (602)
Q Consensus 355 ---~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~i~i~d~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~l~ 420 (602)
-...+... ...+..+ ....+..++..+..|.+..+....- .....+.. .+.|..+...+++..++
T Consensus 103 ~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll 181 (276)
T 3no0_A 103 KAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLL 181 (276)
T ss_dssp CSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEE
T ss_pred hcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEE
Confidence 11111111 1223332 2334567888999999888875321 12222322 34566655555566888
Q ss_pred EEECCCeEEEEeCCC
Q psy12697 421 SCSDDMTLKIWSLDK 435 (602)
Q Consensus 421 ~~~~dg~i~iwd~~~ 435 (602)
..+..|.++...+..
T Consensus 182 ~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 182 VITAKGRVKKISHEE 196 (276)
T ss_dssp EEETTSCEEEEEGGG
T ss_pred EEeCCCcEEEeEHHH
Confidence 888999888887643
No 381
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=47.13 E-value=1.8e+02 Score=27.02 Aligned_cols=121 Identities=9% Similarity=0.066 Sum_probs=64.3
Q ss_pred CcceEEEEEcCCCCEEEEeeCCCcEEEEe---CCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeC---CCCCeE
Q psy12697 222 ESEVFICAWNPVKDFLASGSGDSTARIWD---MTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWN---NNGSFL 295 (602)
Q Consensus 222 ~~~v~~~~~~~~~~~l~s~~~dg~i~iw~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~l 295 (602)
...+..+........|+..+..|.+.-.. +.......... + ... .........|.++..- .++.++
T Consensus 45 ~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~G~------~-i~~-ll~L~~~e~Iv~~~~~~~~~~~~~l 116 (370)
T 3l6v_A 45 EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNARGR------P-IIN-WIPLESGERVQAVLPVREYADNRYV 116 (370)
T ss_dssp CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCE------E-GGG-SCCCCTTCCEEEEEEESCCCTTCEE
T ss_pred CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcccCCc------C-Hhh-ccCCCCCCEEEEEEEeccCCCCcEE
Confidence 44455555555566677777777765444 33221111000 0 000 0001223455555432 245689
Q ss_pred EEEeCCCeEEEEcCC--------CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEEeCC
Q psy12697 296 ATGSYDGYARIWTSD--------GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 351 (602)
Q Consensus 296 ~~~~~dg~i~i~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~wd~~ 351 (602)
+.++..|.++-..+. |.....+.. ...+..+........++..+..|.+..++..
T Consensus 117 l~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 117 FMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp EEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEEGG
T ss_pred EEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEEcc
Confidence 999999999987643 111122322 3455555555555678888888888777643
No 382
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=45.19 E-value=87 Score=31.09 Aligned_cols=58 Identities=10% Similarity=0.094 Sum_probs=39.4
Q ss_pred eeeeeccCCCeEEEeeCC-------------CeEEEEEcCCCceeeEeccC-CCCeEEEEECCCCCEEEEEE
Q psy12697 366 ALDVDWQSNTSFASCSTD-------------QHIHVCKLHSDKPVKSFEGH-TNEVNAIKWDPQGLLLASCS 423 (602)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~-------------~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~ 423 (602)
...+.+.+++.|..+... +.+..++..+++....+.+. ..+++.++|+||++.|++.-
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 445667777766664332 25677777777765555543 35799999999999887764
No 383
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=44.10 E-value=1.8e+02 Score=26.29 Aligned_cols=189 Identities=7% Similarity=-0.020 Sum_probs=100.9
Q ss_pred CCCCEEEEeeCCCcEEEEeCCCCCCCCCccceEEEEEEecCCCcccCCCCceeEEeeCCCCCeEEEEeCCCeEEEEcC--
Q psy12697 232 PVKDFLASGSGDSTARIWDMTDSTKKDPKELQIVLRHCISKGGTEVPSNKDVTSLDWNNNGSFLATGSYDGYARIWTS-- 309 (602)
Q Consensus 232 ~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~~~-- 309 (602)
|+..++++.+.+|.|+--.+......... .......+.+..+........++..+..|.+.-+..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~-------------~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~e 69 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQ-------------DFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHE 69 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTC-------------CCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGG
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCcc-------------ccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHH
Confidence 56678889999999987654321100000 000112344545444445566777788887666542
Q ss_pred -C-------Ccceee-cc-cccCCeEEEEEcc---CCCEEEEEecCCcEEEEeCCCCc------eeEEeeec-cCCeeee
Q psy12697 310 -D-------GSLKST-LG-QHKGPIFALKWNK---RGNYILSAGVDKTTIIWDAASGQ------CEQQFSFH-SAPALDV 369 (602)
Q Consensus 310 -~-------~~~~~~-~~-~~~~~i~~~~~~~---~~~~l~~~~~dg~i~~wd~~~~~------~~~~~~~~-~~~~~~~ 369 (602)
. |..+.. +. .....|..+...+ ++.+++.++..|.++-..+.... -...+... ...+..+
T Consensus 70 lp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~ 149 (323)
T 1wp5_A 70 LPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDV 149 (323)
T ss_dssp SCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEE
T ss_pred CcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEE
Confidence 1 211111 11 1233455543333 25689999999999988764221 12222221 1333333
Q ss_pred ec-cCCCeEEEeeCCCeEEEEEcCCCc---------eeeEeccCCCCeEEEEECCCCC-EEEEEECCCeEEEEeCC
Q psy12697 370 DW-QSNTSFASCSTDQHIHVCKLHSDK---------PVKSFEGHTNEVNAIKWDPQGL-LLASCSDDMTLKIWSLD 434 (602)
Q Consensus 370 ~~-~~~~~~~~~~~~~~i~i~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~ 434 (602)
.. ..+..++..+.+|.+..+....-. ....+. ..+.|.++..-+++. .|++.+..|..+..++.
T Consensus 150 ~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 150 HLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp EEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeC-CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 32 345678889999998888764321 111222 233455554433344 67777888877766654
No 384
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=40.25 E-value=2.1e+02 Score=25.72 Aligned_cols=154 Identities=6% Similarity=0.016 Sum_probs=82.9
Q ss_pred CCceeEEee-C--CCCCeEEEEeCCCeEEEEcCC--------CcceeecccccCCeEEEEEccCCCEEEEEecCCcEEEE
Q psy12697 280 NKDVTSLDW-N--NNGSFLATGSYDGYARIWTSD--------GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIW 348 (602)
Q Consensus 280 ~~~i~~~~~-~--~~~~~l~~~~~dg~i~i~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~w 348 (602)
...|.++.. . .++.+++..+.+|.++-..+. +.....+..+ +.+..+........++..+.+|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf 172 (307)
T 1zi0_A 94 DERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRF 172 (307)
T ss_dssp TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEE
Confidence 345655543 2 355678999999999888643 1111223333 556665555555678888888988877
Q ss_pred eCCCCce-------eEEeee-ccCCeeeeecc-CCCeEEEeeCCCeEEEEEcCCCc---------eeeEeccCCCCeEEE
Q psy12697 349 DAASGQC-------EQQFSF-HSAPALDVDWQ-SNTSFASCSTDQHIHVCKLHSDK---------PVKSFEGHTNEVNAI 410 (602)
Q Consensus 349 d~~~~~~-------~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~i~i~d~~~~~---------~~~~~~~~~~~i~~~ 410 (602)
+...-.. ..-+.. ....+..+... ++..+++.+..|..+-.++.... ....+....+.+-.+
T Consensus 173 ~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~ 252 (307)
T 1zi0_A 173 KESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGA 252 (307)
T ss_dssp EGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEE
T ss_pred EHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEE
Confidence 6543111 111222 22344444433 34568888889988887763211 112222222444444
Q ss_pred EECCCCCEEEEEECCCeEEEEeCC
Q psy12697 411 KWDPQGLLLASCSDDMTLKIWSLD 434 (602)
Q Consensus 411 ~~~~~~~~l~~~~~dg~i~iwd~~ 434 (602)
....+...++..+.+|.+.-++..
T Consensus 253 ~~v~~~~~l~~~t~~g~~ir~~~~ 276 (307)
T 1zi0_A 253 VQVDDCDQIMMITDAGTLVRTRVS 276 (307)
T ss_dssp EEECTTCEEEEEESSCCEEEEEGG
T ss_pred EEeCCCceEEEEcCCCcEEEEecc
Confidence 332333445566666665555543
No 385
>2l1n_A Uncharacterized protein; DUF1823, hypothetical protein, cyanobacteria, structural GEN PSI-biology, protein structure initiative; NMR {Synechococcus elongatus}
Probab=38.08 E-value=7.4 Score=28.32 Aligned_cols=19 Identities=37% Similarity=0.567 Sum_probs=14.9
Q ss_pred ccccchhhhhhhhhhhcCceee
Q psy12697 3 YSSDEVNFLVYRYLQESGFQHS 24 (602)
Q Consensus 3 ~~s~e~n~li~ryL~e~g~~~~ 24 (602)
|+.++||-|||.|| ||..-
T Consensus 18 isD~~Vn~LVW~~L---GYr~d 36 (120)
T 2l1n_A 18 LSDAEANALVWQAL---GYVWD 36 (120)
T ss_dssp SCHHHHHHHHHHHH---TCCEE
T ss_pred cCHHHHHHHHHHHh---Ccccc
Confidence 45569999999998 77653
No 386
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=35.27 E-value=1.4e+02 Score=30.31 Aligned_cols=31 Identities=6% Similarity=0.078 Sum_probs=27.0
Q ss_pred ecCCcEEEEEECCCCCeEEEeccCCeEEeeC
Q psy12697 572 KGTGGIFEVCWNSRGDKVGASASDGSVFKNV 602 (602)
Q Consensus 572 ~~~~~i~~l~~spdg~~l~~~~~dg~v~i~v 602 (602)
....+|..|.+++++.+|.+++.++.++|-|
T Consensus 467 ~~~~pI~~L~ld~~~~~LYV~t~~~V~kVPl 497 (667)
T 4gz8_A 467 REPTTISAMELSTKQQQLYIGSTAGVAQLPL 497 (667)
T ss_dssp SSCCCCCEEEEETTTTEEEEEBSSCEEEEES
T ss_pred CCCceeeeEEEcCCCCEEEEEECCEEEEEEh
Confidence 3467899999999999999999999998864
No 387
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=31.54 E-value=1.3e+02 Score=29.38 Aligned_cols=29 Identities=7% Similarity=0.061 Sum_probs=26.1
Q ss_pred CCcEEEEEECCCCCeEEEeccCCeEEeeC
Q psy12697 574 TGGIFEVCWNSRGDKVGASASDGSVFKNV 602 (602)
Q Consensus 574 ~~~i~~l~~spdg~~l~~~~~dg~v~i~v 602 (602)
..+|..|.+++++.+|.+++.++.++|-|
T Consensus 461 ~~pI~~m~l~~~~~~Lyv~s~~~V~~vpv 489 (495)
T 1q47_A 461 PTTISAMELSTKQQQLYIGSTAGVAQLPL 489 (495)
T ss_dssp CCCCCEEEEETTTTEEEEEBSSCEEEEES
T ss_pred CCccceEEEcCCCCEEEEEECCeEEEEEH
Confidence 47899999999999999999999998864
No 388
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=29.56 E-value=2.8e+02 Score=24.04 Aligned_cols=109 Identities=6% Similarity=0.012 Sum_probs=59.7
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCC-------ceeeeecccCCCeeEeeec-CCc-eEEEeeCCCcEEEeecCC
Q psy12697 482 PIFALKWNKRGNYILSAGVDKTTIIWDAASG-------QCEQQFSFHSAPALDVDWQ-SNT-SFASCSTDQHIHVCKLHS 552 (602)
Q Consensus 482 ~v~~i~~s~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~s-~~~-~l~~~~~d~~i~iw~~~~ 552 (602)
.|.++....++.+|+.++..|.++...+..- .....+.. .+.+..+... .++ .++..+.+|.+..+.+..
T Consensus 85 ~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~e 163 (256)
T 1zvt_A 85 TVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFPVSD 163 (256)
T ss_dssp CEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEEHHH
Confidence 4444433345677888899999998876432 22233332 3455555554 233 788889999988888764
Q ss_pred CCceeeeecccccceEEEEe------cCCcEEEEEECCCCCeEEEeccC
Q psy12697 553 DKPVKSFEGHTTGQLVHSYK------GTGGIFEVCWNSRGDKVGASASD 595 (602)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~------~~~~i~~l~~spdg~~l~~~~~d 595 (602)
-..... ..|...-.+. ....|.++..-+++..|+++...
T Consensus 164 i~~~gR----a~GV~~i~L~~~~~k~~~d~Vv~~~~~~~~~~l~~~~g~ 208 (256)
T 1zvt_A 164 LPQLSK----GKGNKIINIPSAEAARGEDGLAQLYVLPPQSTLTIHVGK 208 (256)
T ss_dssp SCBCSS----BSCEESSCCCHHHHHTTSSCEEEEEEEC-CCEEEEEETT
T ss_pred CCCcCc----cCCeEEEEcccccCCCCCCEEEEEEEECCCCEEEEEeCc
Confidence 322211 2233333333 34556666543444455544333
No 389
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=29.33 E-value=1.7e+02 Score=21.41 Aligned_cols=15 Identities=0% Similarity=-0.062 Sum_probs=8.5
Q ss_pred EEEEEECCCeEEEEe
Q psy12697 418 LLASCSDDMTLKIWS 432 (602)
Q Consensus 418 ~l~~~~~dg~i~iwd 432 (602)
+.++--.||.+++|+
T Consensus 91 ~~~~L~~dGnlvly~ 105 (113)
T 3mez_B 91 YVLILQINGQAVVYG 105 (113)
T ss_dssp CEEEECTTSCEEEEC
T ss_pred EEEEEcCCceEEEec
Confidence 444555566666664
No 390
>3eyi_A Z-DNA-binding protein 1; alternative splicing, DNA-binding, polymorphism, DNA binding protein/Z-DNA complex, DNA binding protein/DNA complex; 1.45A {Homo sapiens} PDB: 2l4m_A
Probab=26.18 E-value=12 Score=24.41 Aligned_cols=26 Identities=19% Similarity=0.399 Sum_probs=18.8
Q ss_pred hhhhhhhhhhcCceeeeeccccccCCc
Q psy12697 9 NFLVYRYLQESGFQHSAYTFGIESHIS 35 (602)
Q Consensus 9 n~li~ryL~e~g~~~~a~~~~~e~~~~ 35 (602)
--.|+|||.++| .++|....++-.+.
T Consensus 12 ee~I~~fL~~~G-p~~AL~IAK~LGlk 37 (72)
T 3eyi_A 12 EEDIYRFLKDNG-PQRALVIAQALGMR 37 (72)
T ss_dssp HHHHHHHHHHHC-SEEHHHHHHHTTCC
T ss_pred HHHHHHHHHHcC-CchHHHHHHHhCcc
Confidence 457999999999 66666666665443
No 391
>3mhs_B Protein SUS1; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3fwc_C 3fwb_C 3kjl_A 3m99_C 3mhh_B 3kik_A 4fip_B 4fjc_B 4fk5_B
Probab=25.65 E-value=23 Score=25.26 Aligned_cols=22 Identities=32% Similarity=0.440 Sum_probs=15.2
Q ss_pred CcccccchhhhhhhhhhhcCce
Q psy12697 1 MTYSSDEVNFLVYRYLQESGFQ 22 (602)
Q Consensus 1 ~~~~s~e~n~li~ryL~e~g~~ 22 (602)
||.+..++---|.++|.|+|--
T Consensus 1 ~~~~~~~lk~~I~~~LveSGe~ 22 (96)
T 3mhs_B 1 MTMDTAQLKSQIQQYLVESGNY 22 (96)
T ss_dssp ----CTHHHHHHHHHHHHTTHH
T ss_pred CCcchHHHHHHHHHHHHHCCcH
Confidence 7888888888999999999933
No 392
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=24.24 E-value=1.1e+02 Score=30.19 Aligned_cols=71 Identities=7% Similarity=-0.058 Sum_probs=44.1
Q ss_pred CeeEeeecCCc---eEEEeeCCCcEEEeecCCCCceeeeecccccceEEEE---ecCCcEE-EEEECCCCCeEEEeccCC
Q psy12697 524 PALDVDWQSNT---SFASCSTDQHIHVCKLHSDKPVKSFEGHTTGQLVHSY---KGTGGIF-EVCWNSRGDKVGASASDG 596 (602)
Q Consensus 524 ~v~~~~~s~~~---~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~-~l~~spdg~~l~~~~~dg 596 (602)
..++++....+ .++.|..+|.|.-..+...... ...+..+ ....+|. .|.+++++.+|.+++.++
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~--------~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~ 472 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHG--------GVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQ 472 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTE--------EEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCcc--------ceeEEEEEeecCCCccccceEEccCCCeEEEEeccc
Confidence 34555544322 6778888998765544322110 0111111 2245775 899999999999999999
Q ss_pred eEEeeC
Q psy12697 597 SVFKNV 602 (602)
Q Consensus 597 ~v~i~v 602 (602)
.++|-|
T Consensus 473 V~kvpl 478 (539)
T 3al9_A 473 VTRVPV 478 (539)
T ss_dssp EEEEES
T ss_pred cceeeh
Confidence 888754
No 393
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=24.20 E-value=5.3e+02 Score=25.54 Aligned_cols=147 Identities=14% Similarity=0.141 Sum_probs=66.4
Q ss_pred CCCCeEEEEECCC--CCEEEEEECCC----eEEEEeCCCCeeeEeeccc--cccEEEEEECCCCCCCCCCCcceeeeeee
Q psy12697 403 HTNEVNAIKWDPQ--GLLLASCSDDM----TLKIWSLDKDNCVHDLQAH--NKEIYTIKWSPTGPETSNPNMSLIFILKS 474 (602)
Q Consensus 403 ~~~~i~~~~~~~~--~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (602)
|...+....|.|+ |..++.+.+++ -..+.|..+++.+...... .+......|.|+.+....-....++....
T Consensus 362 HGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~~pG~E~w~~~~l~~~~G 441 (591)
T 2zux_A 362 HGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADIDPRYPGQEVWANGSLYSAKG 441 (591)
T ss_dssp CCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCCTTSSSCEEEETTEEECTTS
T ss_pred CCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecCCCCCceEEEecCceECCCC
Confidence 5555555556664 33455544431 2345666777776655432 23333333444433110000011111111
Q ss_pred ccCC-c-cCC-eEEEEEccCC-CEEEEEeCCCeEEEEeCCCCc--eeeeecc-------cCCCeeEeeecCCc--eEEEe
Q psy12697 475 TLGQ-H-KGP-IFALKWNKRG-NYILSAGVDKTTIIWDAASGQ--CEQQFSF-------HSAPALDVDWQSNT--SFASC 539 (602)
Q Consensus 475 ~~~~-~-~~~-v~~i~~s~~~-~~l~s~~~dg~i~iwd~~~~~--~~~~~~~-------~~~~v~~~~~s~~~--~l~~~ 539 (602)
.... . ..+ -..+-|.-|. +.++- .+.|.-|+..+++ .+.++.+ ...+.....+--|. -++..
T Consensus 442 ~~i~~~~p~~~N~~i~WdGDl~relld---~~~i~k~~~~~~~~~~l~~~~g~~snngtk~~P~l~aDi~GDwREEvI~~ 518 (591)
T 2zux_A 442 VKIGSGVPSSTNFGIWWDGDLLREQLD---SNRIDKWDYQNGVSKNMLTASGAAANNGTKATPTLQADLLGDWREEVVWR 518 (591)
T ss_dssp CBCSSCCCSCCSEEECCSSSSSCEEEE---TTEEEEEETTTTEEEEEEECTTEECBSGGGCBCSEEECCSSSSSCEEEEE
T ss_pred CEecCCCCCCcceeEEECCCCcHhhhC---CceEEecccCCCceeEEEeecccccCCCCCCCEeeEEeccccCeeEEEEE
Confidence 1111 1 111 2245555554 23332 2468888877665 3333332 23345555565555 45544
Q ss_pred eC-CCcEEEeecCC
Q psy12697 540 ST-DQHIHVCKLHS 552 (602)
Q Consensus 540 ~~-d~~i~iw~~~~ 552 (602)
+. +..++||....
T Consensus 519 t~D~~~LrIYtt~~ 532 (591)
T 2zux_A 519 TEDSSALRIYTTTI 532 (591)
T ss_dssp ETTSSEEEEECCCC
T ss_pred eCCCCeEEEEeCCC
Confidence 44 45699997643
No 394
>1xkm_A Distinctin chain A; pore-forming peptide, heterodimer, structure, homodimer, disulfide, four-helix bundle, antibiotic; NMR {Synthetic} SCOP: j.4.1.6
Probab=23.61 E-value=66 Score=15.39 Aligned_cols=15 Identities=40% Similarity=0.665 Sum_probs=10.5
Q ss_pred CcCCch--hHHHHHHhh
Q psy12697 42 ALVPPA--ALLSIIQKG 56 (602)
Q Consensus 42 ~~~~~~--~li~~~qk~ 56 (602)
..+||| +||.-+.|-
T Consensus 3 revppgftaliktlrkc 19 (26)
T 1xkm_A 3 REVPPGFTALIKTLRKC 19 (26)
T ss_dssp TCSCHHHHHHHHHHHHH
T ss_pred CcCCCcHHHHHHHHHhc
Confidence 457888 788777664
No 395
>3iey_B NEQ261; protein heterodimer, endonuclease, hydrolase, nuclease, tRNA processing, hydrolase-RNA binding protein complex; 2.11A {Nanoarchaeum equitans} PDB: 3if0_X
Probab=22.05 E-value=28 Score=27.51 Aligned_cols=18 Identities=11% Similarity=0.095 Sum_probs=15.5
Q ss_pred chhhhhhhhhhhcCceee
Q psy12697 7 EVNFLVYRYLQESGFQHS 24 (602)
Q Consensus 7 e~n~li~ryL~e~g~~~~ 24 (602)
...|+||++|++.||--.
T Consensus 61 ~~~y~VY~dLR~rG~~vk 78 (153)
T 3iey_B 61 WEIYYTVKDLILRGYRVR 78 (153)
T ss_dssp HHHHHHHHHHHHTTCEEE
T ss_pred hhhhHHHHHHHHCCCEEe
Confidence 467999999999998765
No 396
>3ajv_B TRNA-splicing endonuclease; ENDA, archaea crenarch hydrolase; 1.70A {Aeropyrum pernix} PDB: 3p1z_B
Probab=20.64 E-value=32 Score=28.26 Aligned_cols=26 Identities=31% Similarity=0.575 Sum_probs=19.8
Q ss_pred chhhhhhhhhhhcCceee-eecccccc
Q psy12697 7 EVNFLVYRYLQESGFQHS-AYTFGIES 32 (602)
Q Consensus 7 e~n~li~ryL~e~g~~~~-a~~~~~e~ 32 (602)
..+|+||++|++.||--. ...|+-.-
T Consensus 96 ~~~y~VY~dLr~rG~~v~~G~kfG~df 122 (186)
T 3ajv_B 96 SMLYNIYRDLRERGFVVRSGLKFGSDF 122 (186)
T ss_dssp HHHHHHHHHHHHTTCEEEECGGGTSSE
T ss_pred HHHhhHHHHHHhCceEeccccccCceE
Confidence 468999999999996544 66666553
Done!